Clupeocephala ANCESTRAL SPECIES 396 ENSGT00940000154277.b.b.a ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b #20 ENSGT00940000177737 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 Euteleosteomorpha ANCESTRAL SPECIES 136 ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b #20 ENSGT00940000177737 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 ENSGT00940000157552.s.a #37 Acanthomorphata ANCESTRAL SPECIES 40 ENSGT00530000063960 ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b #20 ENSGT00940000177737 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 ENSGT00940000157552.s.a #37 Euacanthomorphacea ANCESTRAL SPECIES 3 ENSGT00530000063960 ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b #20 ENSGT00940000177737 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 ENSGT00940000157552.s.a #37 Percomorphaceae ANCESTRAL SPECIES 17 ENSGT00530000063960 ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b #20 ENSGT00940000177737 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 ENSGT00940000157552.s.a #37 Percomorphaceae_B ANCESTRAL SPECIES ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT00650000094757 ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.c.a ##20 ENSGT00940000177737 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 Ovalentaria ANCESTRAL SPECIES ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT00650000094757 ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 Atherinomorphae ANCESTRAL SPECIES 20 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT00650000094757 ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 Cyprinodontiformes ANCESTRAL SPECIES 18 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT00650000094757 ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 Cyprinodontoidei ANCESTRAL SPECIES 15 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT00650000094757 ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 Poeciliinae ANCESTRAL SPECIES 9 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT00650000094757 ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 Poecilia ANCESTRAL SPECIES 6 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT00650000094757 ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00940000165343.d ##31 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 NAME_6 ANCESTRAL SPECIES 47 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT00650000094757 ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00940000165343.d ##31 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 Sailfin molly DUPLICATION Sailfin molly MODERN SPECIES 4 rnaseh2a (ENSPLAG00000018723) #16 MAST1 (ENSPLAG00000018711) #17 atg4da (ENSPLAG00000018657) #18 SMARCA4 (ENSPLAG00000018616) #19 ENSPLAG00000018526 #20 ap1m2 (ENSPLAG00000018476) #21 CDKN2D (ENSPLAG00000018442) #22 ENSPLAG00000018432 #23 keap1b (ENSPLAG00000018426) #24 s1pr5b (ENSPLAG00000018413) #25 fdx2 (ENSPLAG00000018407) #26 ENSPLAG00000018403 #27 ENSPLAG00000018396 #28 ENSPLAG00000018392 #29 ENSPLAG00000018384 #30 ENSPLAG00000018376 #31 HMOX1 (ENSPLAG00000018364) #32 rnf11a (ENSPLAG00000018356) #33 NFIX (ENSPLAG00000018337) #34 dand5 (ENSPLAG00000018314) #35 tspan34 (ENSPLAG00000018292) #36 RAB3D (ENSPLAG00000018052) #37 Sailfin molly MODERN SPECIES 438 dmrta2 (ENSPLAG00000005407) faf1 (ENSPLAG00000005394) ENSPLAG00000005359 ##22 rnf11b (ENSPLAG00000005349) TTC39A (ENSPLAG00000005323) ENSPLAG00000005144 calr (ENSPLAG00000005102) tor3a (ENSPLAG00000005070) osbpl9 (ENSPLAG00000005021) abl2 (ENSPLAG00000004898) soat1 (ENSPLAG00000004885) Amazon molly DUPLICATION Amazon molly MODERN SPECIES 303 ENSPFOG00000004270 tax1bp3 (ENSPFOG00000004292) slc1a6 (ENSPFOG00000004310) ENSPFOG00000004463 pole4 (ENSPFOG00000004484) ENSPFOG00000004525 ccl25b (ENSPFOG00000004562) gclm (ENSPFOG00000004600) dnttip2 (ENSPFOG00000004653) spata6 (ENSPFOG00000023137) AGBL4 (ENSPFOG00000004717) bend5 (ENSPFOG00000004753) elavl4 (ENSPFOG00000004811) dmrta2 (ENSPFOG00000004939) faf1 (ENSPFOG00000004981) ENSPFOG00000005246 #22 rnf11b (ENSPFOG00000005255) TTC39A (ENSPFOG00000005356) EPS15 (ENSPFOG00000005835) calr (ENSPFOG00000005960) tor3a (ENSPFOG00000006170) osbpl9 (ENSPFOG00000006260) abl2 (ENSPFOG00000006669) soat1 (ENSPFOG00000006972) ENSPFOG00000007239 CACNA1E (ENSPFOG00000007877) CEP350 (ENSPFOG00000008359) qsox1 (ENSPFOG00000008535) lhx4 (ENSPFOG00000008745) lhx4 (ENSPFOG00000008766) acbd6 (ENSPFOG00000008788) Amazon molly MODERN SPECIES 295 serhl (ENSPFOG00000012304) mb (ENSPFOG00000012371) ENSPFOG00000012395 zgc:158803 (ENSPFOG00000012437) smdt1b (ENSPFOG00000012495) ENSPFOG00000012509 ENSPFOG00000021920 ENSPFOG00000012599 ENSPFOG00000012609 rnaseh2a (ENSPFOG00000012627) #16 MAST1 (ENSPFOG00000012690) #17 atg4da (ENSPFOG00000012852) #18 SMARCA4 (ENSPFOG00000012930) #19 ENSPFOG00000013091 #20 ap1m2 (ENSPFOG00000023907) #21 CDKN2D (ENSPFOG00000013301) #22 ENSPFOG00000013303 #23 keap1b (ENSPFOG00000013318) #24 s1pr5b (ENSPFOG00000020141) #25 fdx2 (ENSPFOG00000013381) #26 ENSPFOG00000023655 #28 ENSPFOG00000013392 #29 ENSPFOG00000013394 #30 ENSPFOG00000013403 #31 ENSPFOG00000022531 ##31 HMOX1 (ENSPFOG00000013418) #32 rnf11a (ENSPFOG00000013436) #33 NFIX (ENSPFOG00000013453) #34 dand5 (ENSPFOG00000013550) #35 tspan34 (ENSPFOG00000013561) #36 RAB3D (ENSPFOG00000013657) #37 Guppy DUPLICATION Guppy DUPLICATION Guppy MODERN SPECIES 456 ENSPREG00000020075 ENSPREG00000020055 ARHGAP39 (ENSPREG00000020019) ENSPREG00000019993 rad54l (ENSPREG00000019955) ENSPREG00000019898 EPS15L1 (ENSPREG00000019656) ENSPREG00000019559 ENSPREG00000019547 SZT2 (ENSPREG00000019474) hyi (ENSPREG00000019414) ENSPREG00000019400 ENSPREG00000019384 ENSPREG00000019377 ENSPREG00000019359 ENSPREG00000019157 #22 bend5 (ENSPREG00000019102) AGBL4 (ENSPREG00000019035) elavl4 (ENSPREG00000018937) dmrta2 (ENSPREG00000018881) faf1 (ENSPREG00000018831) ENSPREG00000018593 #22 rnf11b (ENSPREG00000018536) TTC39A (ENSPREG00000018452) EPS15 (ENSPREG00000018381) calr (ENSPREG00000018357) tor3a (ENSPREG00000018330) osbpl9 (ENSPREG00000018181) abl2 (ENSPREG00000018109) soat1 (ENSPREG00000018080) CACNA1E (ENSPREG00000017980) Guppy MODERN SPECIES 456 EPS15L1 (ENSPREG00000019656) ENSPREG00000019559 ENSPREG00000019547 SZT2 (ENSPREG00000019474) hyi (ENSPREG00000019414) ENSPREG00000019400 ENSPREG00000019384 ENSPREG00000019377 ENSPREG00000019359 ENSPREG00000019157 #22 bend5 (ENSPREG00000019102) AGBL4 (ENSPREG00000019035) elavl4 (ENSPREG00000018937) dmrta2 (ENSPREG00000018881) faf1 (ENSPREG00000018831) ENSPREG00000018593 #22 rnf11b (ENSPREG00000018536) TTC39A (ENSPREG00000018452) EPS15 (ENSPREG00000018381) calr (ENSPREG00000018357) tor3a (ENSPREG00000018330) osbpl9 (ENSPREG00000018181) abl2 (ENSPREG00000018109) soat1 (ENSPREG00000018080) CACNA1E (ENSPREG00000017980) qsox1 (ENSPREG00000017924) lhx4 (ENSPREG00000017901) acbd6 (ENSPREG00000017881) ENSPREG00000017843 sin3b (ENSPREG00000017772) haus5 (ENSPREG00000017687) Guppy MODERN SPECIES 439 tefm (ENSPREG00000015588) serhl (ENSPREG00000015573) mb (ENSPREG00000015563) ENSPREG00000015549 zgc:158803 (ENSPREG00000015528) smdt1b (ENSPREG00000015520) ENSPREG00000015510 ENSPREG00000015145 ENSPREG00000015036 rnaseh2a (ENSPREG00000015015) #16 MAST1 (ENSPREG00000014975) #17 atg4da (ENSPREG00000014939) #18 SMARCA4 (ENSPREG00000014823) #19 ENSPREG00000014073 #20 ap1m2 (ENSPREG00000013898) #21 CDKN2D (ENSPREG00000013882) #22 ENSPREG00000013872 #23 keap1b (ENSPREG00000013858) #24 s1pr5b (ENSPREG00000013844) #25 fdx2 (ENSPREG00000013790) #26 ENSPREG00000013782 #27 ENSPREG00000013775 #28 ENSPREG00000013771 #29 ENSPREG00000013765 #30 ENSPREG00000013750 #31 HMOX1 (ENSPREG00000013545) #32 rnf11a (ENSPREG00000013482) #33 NFIX (ENSPREG00000013386) #34 dand5 (ENSPREG00000013337) #35 tspan34 (ENSPREG00000013321) #36 RAB3D (ENSPREG00000013308) #37 Platyfish MODERN SPECIES 19 serhl (ENSXMAG00000006867) mb (ENSXMAG00000025476) ENSXMAG00000006894 zgc:158803 (ENSXMAG00000006903) ENSXMAG00000022941 ENSXMAG00000006923 ENSXMAG00000006940 ENSXMAG00000021473 rnaseh2a (ENSXMAG00000006953) #16 ENSXMAG00000027436 MAST1 (ENSXMAG00000006970) #17 atg4da (ENSXMAG00000007016) #18 SMARCA4 (ENSXMAG00000007030) #19 ENSXMAG00000007105 #20 ap1m2 (ENSXMAG00000007151) #21 CDKN2D (ENSXMAG00000022409) #22 ENSXMAG00000007179 #23 keap1b (ENSXMAG00000021448) #24 s1pr5b (ENSXMAG00000019815) #25 fdx2 (ENSXMAG00000005511) #26 ENSXMAG00000020994 #27 ENSXMAG00000019816 #28 ENSXMAG00000026103 #29 ENSXMAG00000027376 #30 ENSXMAG00000025089 #31 ENSXMAG00000025662 HMOX1 (ENSXMAG00000007220) #32 rnf11a (ENSXMAG00000022184) #33 NFIX (ENSXMAG00000007238) #34 dand5 (ENSXMAG00000017343) #35 tspan34 (ENSXMAG00000024059) #36 NAME_4 ANCESTRAL SPECIES 73 ENSGT00390000010581 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00940000165343.d ##31 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a.d #36 Sheepshead minnow MODERN SPECIES 1076 AP1M2 (ENSCVAG00000019645) #21 CDKN2D (ENSCVAG00000019607) #22 ENSCVAG00000019605 #23 keap1b (ENSCVAG00000019600) #24 s1pr5b (ENSCVAG00000019571) #25 ENSCVAG00000019565 klf4 (ENSCVAG00000019555) SNCA (ENSCVAG00000019542) ENSCVAG00000019418 nop14 (ENSCVAG00000019406) add1 (ENSCVAG00000019337) Mummichog MODERN SPECIES 399 serhl (ENSFHEG00000007585) mb (ENSFHEG00000007598) ENSFHEG00000007618 zgc:158803 (ENSFHEG00000007623) smdt1b (ENSFHEG00000007632) ENSFHEG00000007638 KCNJ4 (ENSFHEG00000007650) SOX10 (ENSFHEG00000007675) rnaseh2a (ENSFHEG00000007682) #16 MAST1 (ENSFHEG00000007742) #17 atg4da (ENSFHEG00000007752) #18 SMARCA4 (ENSFHEG00000007902) #19 ENSFHEG00000007919 ENSFHEG00000007933 #20 ap1m2 (ENSFHEG00000007972) #21 CDKN2D (ENSFHEG00000007983) #22 ENSFHEG00000007992 #23 keap1b (ENSFHEG00000007996) #24 s1pr5b (ENSFHEG00000008004) #25 ENSFHEG00000008010 fdx2 (ENSFHEG00000008018) #26 ENSFHEG00000008045 #27 ENSFHEG00000008060 #28 Aplocheiloidei ANCESTRAL SPECIES 32 ENSGT00940000153469.a.a.l ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 ENSGT00940000157552.s.a #37 Mangrove rivulus MODERN SPECIES 138 ENSKMAG00000020046 mb (ENSKMAG00000020029) ENSKMAG00000020017 zgc:158803 (ENSKMAG00000019994) ENSKMAG00000019985 ENSKMAG00000019930 ENSKMAG00000019899 KCNJ4 (ENSKMAG00000019890) SOX10 (ENSKMAG00000019870) rnaseh2a (ENSKMAG00000019829) #16 MAST1 (ENSKMAG00000019681) #17 atg4da (ENSKMAG00000019629) #18 SMARCA4 (ENSKMAG00000019518) #19 ENSKMAG00000019458 #20 ap1m2 (ENSKMAG00000019421) #21 CDKN2D (ENSKMAG00000019404) #22 ENSKMAG00000019395 #23 keap1b (ENSKMAG00000019360) #24 s1pr5b (ENSKMAG00000019347) #25 fdx2 (ENSKMAG00000019336) #26 ENSKMAG00000019325 #27 ENSKMAG00000019315 #28 ENSKMAG00000019305 #29 ENSKMAG00000019283 #30 ENSKMAG00000019262 #31 ENSKMAG00000019249 #32 rnf11a (ENSKMAG00000019233) #33 NFIX (ENSKMAG00000019092) #34 dand5 (ENSKMAG00000019010) #35 tspan34 (ENSKMAG00000018993) #36 ENSKMAG00000018973 #37 Turquoise killifish MODERN SPECIES 1617 MB (ENSNFUG00015018903) ENSNFUG00015018909 PANE1 (ENSNFUG00015018910) zgc:158803 (ENSNFUG00015018917) C3H22ORF32 (ENSNFUG00015018926) ENSNFUG00015018928 ENSNFUG00015018933 ENSNFUG00015018937 SOX10 (ENSNFUG00015018941) RNASEH2A (ENSNFUG00015018947) #16 MAST1 (ENSNFUG00015019007) #17 atg4da (ENSNFUG00015020523) #18 SMARCA4 (ENSNFUG00015020530) #19 ENSNFUG00015020613 #20 ap1m2 (ENSNFUG00015022583) #21 Cdkn2d (ENSNFUG00015022781) #22 ENSNFUG00015022782 #23 LRRC8E (ENSNFUG00015022783) DDX5 (ENSNFUG00015022815) Nfu_g_1_013649 (ENSNFUG00015023104) ENSNFUG00015023110 TTBK1 (ENSNFUG00015023144) TPC3 (ENSNFUG00015023162) TMEM246 (ENSNFUG00015023205) LGALSLA (ENSNFUG00015023207) slc29a2 (ENSNFUG00015023212) PELI1A (ENSNFUG00015023219) vps54 (ENSNFUG00015023231) ugp2a (ENSNFUG00015023325) MDH1 (ENSNFUG00015023534) otx2a (ENSNFUG00015023572) Oryzias ANCESTRAL SPECIES 15 ENSGT01030000234820 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 ENSGT00940000157552.s.a #37 Oryzias_a ANCESTRAL SPECIES 23 ENSGT01030000234820 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00940000165833 ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 ENSGT00940000157552.s.a #37 Japanese Medaka HdrR MODERN SPECIES ENSORLG00000028999 serhl (ENSORLG00000004149) mb (ENSORLG00000026103) pane1 (ENSORLG00000004119) ENSORLG00000004110 smdt1b (ENSORLG00000004088) ENSORLG00000004082 ENSORLG00000004067 ENSORLG00000024031 rnaseh2a (ENSORLG00000004042) #16 ENSORLG00000022445 #17 atg4da (ENSORLG00000004021) #18 ENSORLG00000003955 #19 ENSORLG00000003886 #20 ap1m2 (ENSORLG00000003846) #21 CDKN2D (ENSORLG00000003842) #22 ENSORLG00000003831 #23 ENSORLG00000027541 #23 keap1b (ENSORLG00000003823) #24 s1pr5b (ENSORLG00000003793) #25 fdx2 (ENSORLG00000029397) #26 ENSORLG00000024901 #27 ENSORLG00000003779 #28 ENSORLG00000003776 #30 ENSORLG00000003769 #31 ENSORLG00000028289 ENSORLG00000003753 #32 rnf11a (ENSORLG00000022986) #33 NFIX (ENSORLG00000003734) #34 dand5 (ENSORLG00000003690) #35 tspan34 (ENSORLG00000003680) #36 Chinese medaka MODERN SPECIES 272 ENSOSIG00000021706 serhl (ENSOSIG00000021711) mb (ENSOSIG00000021717) pane1 (ENSOSIG00000021730) ENSOSIG00000021748 ENSOSIG00000021753 ENSOSIG00000021756 ENSOSIG00000021766 SOX10 (ENSOSIG00000021784) rnaseh2a (ENSOSIG00000021790) #16 MAST1 (ENSOSIG00000021971) #17 atg4da (ENSOSIG00000022514) #18 SMARCA4 (ENSOSIG00000022566) #19 ENSOSIG00000022637 #20 AP1M2 (ENSOSIG00000022846) #21 CDKN2D (ENSOSIG00000022850) #22 ENSOSIG00000022851 ENSOSIG00000022853 keap1b (ENSOSIG00000022855) #24 s1pr5b (ENSOSIG00000022856) #25 fdx2 (ENSOSIG00000022858) #26 ENSOSIG00000022860 #27 ENSOSIG00000022863 #28 ENSOSIG00000022867 #30 ENSOSIG00000022869 #31 ENSOSIG00000022870 ##31 ENSOSIG00000000088 HMOX1 (ENSOSIG00000000100) #32 rnf11a (ENSOSIG00000000109) #33 NFIX (ENSOSIG00000000182) #34 dand5 (ENSOSIG00000000234) #35 Oryzias_b ANCESTRAL SPECIES 29 ENSGT01030000234820 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 ENSGT00940000157552.s.a #37 ENSGT00390000004368 Javanese ricefish MODERN SPECIES septin3 (ENSOJAG00000018354) ENSOJAG00000018446 serhl (ENSOJAG00000018454) mb (ENSOJAG00000018470) ENSOJAG00000018485 zgc:158803 (ENSOJAG00000018496) smdt1b (ENSOJAG00000018524) ENSOJAG00000018533 ENSOJAG00000018551 SOX10 (ENSOJAG00000018558) rnaseh2a (ENSOJAG00000018576) #16 MAST1 (ENSOJAG00000018779) #17 atg4da (ENSOJAG00000020110) #18 ENSOJAG00000020541 #20 ap1m2 (ENSOJAG00000021653) #21 CDKN2D (ENSOJAG00000021763) #22 ENSOJAG00000021769 #23 keap1b (ENSOJAG00000021777) #24 s1pr5b (ENSOJAG00000021789) #25 fdx2 (ENSOJAG00000021790) #26 ENSOJAG00000021795 #27 ENSOJAG00000021797 #28 ENSOJAG00000021805 #30 ENSOJAG00000021807 #31 HMOX1 (ENSOJAG00000021814) #32 rnf11a (ENSOJAG00000021842) #33 NFIX (ENSOJAG00000021867) #34 dand5 (ENSOJAG00000021902) #35 tspan34 (ENSOJAG00000021920) #36 RAB3D (ENSOJAG00000021948) #37 pld6 (ENSOJAG00000021963) Indian medaka MODERN SPECIES 21 ENSOMEG00000016237 serhl (ENSOMEG00000016261) mb (ENSOMEG00000016290) ENSOMEG00000016315 zgc:158803 (ENSOMEG00000016350) smdt1b (ENSOMEG00000016364) ENSOMEG00000016389 ENSOMEG00000016403 SOX10 (ENSOMEG00000016415) rnaseh2a (ENSOMEG00000016454) #16 MAST1 (ENSOMEG00000000412) #17 atg4da (ENSOMEG00000016515) #18 SMARCA4 (ENSOMEG00000016626) #19 ENSOMEG00000000419 #20 ap1m2 (ENSOMEG00000016714) #21 CDKN2D (ENSOMEG00000016735) #22 ENSOMEG00000016757 #23 fdx2 (ENSOMEG00000000776) #26 ENSOMEG00000016799 #27 ENSOMEG00000016816 #28 keap1b (ENSOMEG00000016855) #24 ENSOMEG00000016869 #30 ENSOMEG00000016899 #31 HMOX1 (ENSOMEG00000016914) #32 rnf11a (ENSOMEG00000016928) #33 NFIX (ENSOMEG00000017131) #34 dand5 (ENSOMEG00000017180) #35 tspan34 (ENSOMEG00000017196) #36 RAB3D (ENSOMEG00000017217) #37 pld6 (ENSOMEG00000017243) elof1 (ENSOMEG00000017257) Ovalentaria_B ANCESTRAL SPECIES 4 ENSGT00530000063960.g.b ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00940000181262 ENSGT00940000165343.d ##31 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 Pomacentridae ANCESTRAL SPECIES 8 ENSGT00530000063960.g.b ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00940000181262 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 Pomacentridae_A ANCESTRAL SPECIES ENSGT00530000063960.g.b ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00940000181262 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 Amphiprion ANCESTRAL SPECIES ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT01090000261423 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00940000181262 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00950000182916.a.b.a.a.a.b.b.a ##34 ENSGT00530000063926.b #35 Orange clownfish MODERN SPECIES 17 mb (ENSAPEG00000022796) ENSAPEG00000022807 zgc:158803 (ENSAPEG00000022841) smdt1b (ENSAPEG00000022857) ENSAPEG00000022874 ENSAPEG00000022889 SOX10 (ENSAPEG00000022921) rnaseh2a (ENSAPEG00000022937) #16 ENSAPEG00000022961 MAST1 (ENSAPEG00000022973) #17 ENSAPEG00000023018 atg4da (ENSAPEG00000023035) #18 SMARCA4 (ENSAPEG00000023108) #19 ENSAPEG00000023188 #20 ap1m2 (ENSAPEG00000023204) #21 CDKN2D (ENSAPEG00000023215) #22 ENSAPEG00000023218 #23 keap1b (ENSAPEG00000023223) #24 s1pr5b (ENSAPEG00000023229) #25 fdx2 (ENSAPEG00000023232) #26 ENSAPEG00000023241 #27 ENSAPEG00000023251 #28 NEU3 (ENSAPEG00000023257) #29 ENSAPEG00000023267 #30 ENSAPEG00000023300 #31 ENSAPEG00000023313 HMOX1 (ENSAPEG00000023325) #32 rnf11a (ENSAPEG00000023334) #33 NFIX (ENSAPEG00000023351) #34 dand5 (ENSAPEG00000023394) #35 tspan34 (ENSAPEG00000023403) #36 Clown anemonefish MODERN SPECIES 1044 mb (ENSAOCG00000008982) pane1 (ENSAOCG00000009012) zgc:158803 (ENSAOCG00000009085) smdt1b (ENSAOCG00000009097) ENSAOCG00000009111 ENSAOCG00000009131 SOX10 (ENSAOCG00000009184) rnaseh2a (ENSAOCG00000009217) #16 ENSAOCG00000009239 ENSAOCG00000009261 MAST1 (ENSAOCG00000009348) #17 atg4da (ENSAOCG00000009366) #18 SMARCA4 (ENSAOCG00000009450) #19 ENSAOCG00000009468 #20 ap1m2 (ENSAOCG00000009505) #21 CDKN2D (ENSAOCG00000009517) #22 ENSAOCG00000002137 #23 keap1b (ENSAOCG00000009527) #24 s1pr5b (ENSAOCG00000009535) #25 fdx2 (ENSAOCG00000009574) #26 ENSAOCG00000009617 #27 ENSAOCG00000009625 #28 Spiny chromis MODERN SPECIES 88 serhl (ENSAPOG00000000089) mb (ENSAPOG00000003952) pane1 (ENSAPOG00000003964) zgc:158803 (ENSAPOG00000003970) smdt1b (ENSAPOG00000003995) ENSAPOG00000004017 ENSAPOG00000004042 SOX10 (ENSAPOG00000004067) rnaseh2a (ENSAPOG00000004101) #16 MAST1 (ENSAPOG00000004190) #17 atg4da (ENSAPOG00000004347) #18 atg4da (ENSAPOG00000004393) #18 SMARCA4 (ENSAPOG00000004542) #19 ENSAPOG00000004583 #20 ap1m2 (ENSAPOG00000004630) #21 CDKN2D (ENSAPOG00000004642) #22 ENSAPOG00000000116 #23 keap1b (ENSAPOG00000004671) #24 s1pr5b (ENSAPOG00000004684) #25 fdx2 (ENSAPOG00000004692) #26 zglp1 (ENSAPOG00000004713) #27 ENSAPOG00000004728 #28 ENSAPOG00000004745 #29 ENSAPOG00000004766 #30 ENSAPOG00000004786 #31 HMOX1 (ENSAPOG00000004803) #32 rnf11a (ENSAPOG00000004817) #33 NFIX (ENSAPOG00000004937) #34 dand5 (ENSAPOG00000004996) #35 ENSAPOG00000005041 #36 Bicolor damselfish MODERN SPECIES 239 serhl (ENSSPAG00000013461) mb (ENSSPAG00000013443) ENSSPAG00000013408 zgc:158803 (ENSSPAG00000013318) ENSSPAG00000013302 ENSSPAG00000013289 ENSSPAG00000012865 SOX10 (ENSSPAG00000012804) rnaseh2a (ENSSPAG00000012769) #16 ENSSPAG00000012759 MAST1 (ENSSPAG00000012704) #17 atg4da (ENSSPAG00000012672) #18 SMARCA4 (ENSSPAG00000012533) #19 ENSSPAG00000012489 #20 ap1m2 (ENSSPAG00000012447) #21 CDKN2D (ENSSPAG00000012438) #22 ENSSPAG00000012424 #23 keap1b (ENSSPAG00000012410) #24 s1pr5b (ENSSPAG00000012405) #25 fdx2 (ENSSPAG00000012392) #26 zglp1 (ENSSPAG00000012373) #27 ENSSPAG00000012365 #28 ENSSPAG00000012355 ENSSPAG00000012346 NEU3 (ENSSPAG00000012338) #29 ENSSPAG00000012330 #30 ENSSPAG00000012292 #31 HMOX1 (ENSSPAG00000012255) #32 rnf11a (ENSSPAG00000012240) #33 NFIX (ENSSPAG00000012179) #34 dand5 (ENSSPAG00000012165) #35 Cichlidae ANCESTRAL SPECIES 3 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.c.b ##20 ENSGT00940000154819.a.b.c.b.c.a ##20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 ENSGT00940000157552.s.a #37 Pseudocrenilabrinae ANCESTRAL SPECIES 3 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.c.b ##20 ENSGT00940000154819.a.b.c.b.c.a.a ##20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d.f.a #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 ENSGT00940000157552.s.a #37 Pseudocrenilabrinae_A ANCESTRAL SPECIES 5 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.c.b ##20 ENSGT00940000154819.a.b.c.b.c.a.a ##20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d.f.a #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 ENSGT00940000157552.s.a #37 Haplochromini ANCESTRAL SPECIES 3 ENSGT00530000063960.g.b ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.c.a.a ##20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d.f.a #29 ENSGT00950000182944.A.b.d.f.b #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 Burton s mouthbrooder MODERN SPECIES 734 ENSHBUG00000005167 zgc:158803 (ENSHBUG00000005175) smdt1b (ENSHBUG00000005194) ENSHBUG00000005215 KCNJ4 (ENSHBUG00000005222) ENSHBUG00000005242 rnaseh2a (ENSHBUG00000005267) #16 ENSHBUG00000005303 #17 MAST1 (ENSHBUG00000005318) #17 atg4da (ENSHBUG00000005336) #18 SMARCA4 (ENSHBUG00000005447) #19 ENSHBUG00000005468 ENSHBUG00000005484 ENSHBUG00000006790 ##20 ap1m2 (ENSHBUG00000006969) #21 CDKN2D (ENSHBUG00000006917) #22 ENSHBUG00000006982 #23 keap1b (ENSHBUG00000006989) #24 s1pr5b (ENSHBUG00000006993) #25 fdx2 (ENSHBUG00000007004) #26 ENSHBUG00000007015 #27 ENSHBUG00000007027 #28 ENSHBUG00000007502 #29 Haplochromini_A ANCESTRAL SPECIES 2 ENSGT00530000063960.g.b ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.c.a.a ##20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d.f.a #29 ENSGT00950000182944.A.b.d.f.b #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 P. nyererei MODERN SPECIES 643 mb (ENSPNYG00000023965) ENSPNYG00000023967 zgc:158803 (ENSPNYG00000023971) smdt1b (ENSPNYG00000023975) KCNJ4 (ENSPNYG00000023978) ENSPNYG00000023985 rnaseh2a (ENSPNYG00000023986) #16 ENSPNYG00000023987 ENSPNYG00000023988 #17 MAST1 (ENSPNYG00000023989) #17 atg4da (ENSPNYG00000023991) #18 SMARCA4 (ENSPNYG00000023995) #19 ENSPNYG00000024000 ##20 ENSPNYG00000024002 ##20 ap1m2 (ENSPNYG00000024003) #21 CDKN2D (ENSPNYG00000024004) #22 ENSPNYG00000024006 #23 keap1b (ENSPNYG00000024008) #24 s1pr5b (ENSPNYG00000024012) #25 fdx2 (ENSPNYG00000024013) #26 zglp1 (ENSPNYG00000024014) #27 ENSPNYG00000024016 #29 ENSPNYG00000024017 #28 Haplochromini_B ANCESTRAL SPECIES 8 ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.c.a.b ##20 ENSGT00940000177737 ENSGT00940000154819.a.b.c.b.c.a.a ##20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d.f.a #29 ENSGT00950000182944.A.b.d.e #29 ENSGT00950000182944.A.b.d.f.b #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00950000182916.a.b.a.a.a.b.b.a ##34 Eastern happy MODERN SPECIES 18 ENSACLG00000009285 smdt1b (ENSACLG00000009268) ENSACLG00000009244 ENSACLG00000009236 KCNJ4 (ENSACLG00000009229) ENSACLG00000009200 rnaseh2a (ENSACLG00000009169) #16 ENSACLG00000009128 #17 MAST1 (ENSACLG00000009080) #17 atg4da (ENSACLG00000008714) #18 SMARCA4 (ENSACLG00000008638) #19 ENSACLG00000008000 ##20 ENSACLG00000007950 ENSACLG00000007886 ##20 ap1m2 (ENSACLG00000007855) #21 CDKN2D (ENSACLG00000007877) #22 ENSACLG00000007845 #23 keap1b (ENSACLG00000007822) #24 s1pr5b (ENSACLG00000007818) #25 fdx2 (ENSACLG00000007805) #26 ENSACLG00000007782 #27 ENSACLG00000007772 #28 ENSACLG00000007765 #29 NEU3 (ENSACLG00000007762) #29 NEU3 (ENSACLG00000007753) #29 ENSACLG00000007748 #30 ENSACLG00000007737 #31 HMOX1 (ENSACLG00000007729) #32 rnf11a (ENSACLG00000007714) #33 NFIX (ENSACLG00000007600) #34 dand5 (ENSACLG00000007596) #35 Zebra mbuna MODERN SPECIES 1109 zgc:158803 (ENSMZEG00005023852) smdt1b (ENSMZEG00005023853) ENSMZEG00005023854 KCNJ4 (ENSMZEG00005023855) ENSMZEG00005023856 rnaseh2a (ENSMZEG00005023857) #16 ENSMZEG00005023858 #17 ENSMZEG00005023859 #17 atg4da (ENSMZEG00005023860) #18 SMARCA4 (ENSMZEG00005023861) #19 ENSMZEG00005023862 ENSMZEG00005023863 ##20 ENSMZEG00005023864 ##20 ENSMZEG00005023865 ap1m2 (ENSMZEG00005023866) #21 CDKN2D (ENSMZEG00005023867) #22 ENSMZEG00005023868 #23 keap1b (ENSMZEG00005023869) #24 s1pr5b (ENSMZEG00005023870) #25 fdx2 (ENSMZEG00005023871) #26 ENSMZEG00005023872 #27 ENSMZEG00005023873 #28 ENSMZEG00005023874 #29 NEU3 (ENSMZEG00005023875) #29 NEU3 (ENSMZEG00005023876) #29 ENSMZEG00005023877 NFIX (ENSMZEG00005023878) ##34 dand5 (ENSMZEG00005023879) #35 tspan34 (ENSMZEG00005023880) #36 RAB3D (ENSMZEG00005023881) #37 pld6 (ENSMZEG00005023882) Lyretail cichlid MODERN SPECIES 301 serhl (ENSNBRG00000018375) serhl (ENSNBRG00000018405) mb (ENSNBRG00000018430) ENSNBRG00000018440 zgc:158803 (ENSNBRG00000018476) smdt1b (ENSNBRG00000018490) KCNJ4 (ENSNBRG00000018518) ENSNBRG00000018705 rnaseh2a (ENSNBRG00000018731) #16 MAST1 (ENSNBRG00000018757) #17 atg4da (ENSNBRG00000018815) #18 SMARCA4 (ENSNBRG00000018865) #19 ENSNBRG00000018933 ##20 ENSNBRG00000018963 ##20 ap1m2 (ENSNBRG00000019060) #21 CDKN2D (ENSNBRG00000019096) #22 ENSNBRG00000019117 #23 keap1b (ENSNBRG00000019129) #24 s1pr5b (ENSNBRG00000019138) #25 fdx2 (ENSNBRG00000019149) #26 zglp1 (ENSNBRG00000019171) #27 ENSNBRG00000019197 #28 NEU3 (ENSNBRG00000019205) #29 ENSNBRG00000019216 #30 ENSNBRG00000019223 ##31 HMOX1 (ENSNBRG00000019244) #32 rnf11a (ENSNBRG00000019250) #33 NFIX (ENSNBRG00000019307) #34 dand5 (ENSNBRG00000019412) #35 tspan34 (ENSNBRG00000019428) #36 RAB3D (ENSNBRG00000019454) #37 Nile tilapia MODERN SPECIES 18 serhl (ENSONIG00000018014) serhl (ENSONIG00000018016) Mb (ENSONIG00000018018) ENSONIG00000018021 zgc:158803 (ENSONIG00000018025) smdt1b (ENSONIG00000036008) ENSONIG00000018028 KCNJ4 (ENSONIG00000018031) ENSONIG00000018032 rnaseh2a (ENSONIG00000018033) #16 MAST1 (ENSONIG00000018034) #17 atg4da (ENSONIG00000031738) #18 SMARCA4 (ENSONIG00000018040) #19 ENSONIG00000018056 ##20 ap1m2 (ENSONIG00000018060) #21 CDKN2D (ENSONIG00000032001) #22 ENSONIG00000018063 #23 keap1b (ENSONIG00000018066) #24 s1pr5b (ENSONIG00000021227) #25 fdx2 (ENSONIG00000018067) #26 ENSONIG00000033442 #27 ENSONIG00000018068 #28 neu3e (ENSONIG00000018070) #29 NEU3 (ENSONIG00000018069) #29 ENSONIG00000028184 ENSONIG00000018071 #30 ENSONIG00000018073 #31 HMOX1 (ENSONIG00000018076) #32 rnf11a (ENSONIG00000037073) #33 NFIX (ENSONIG00000018077) #34 dand5 (ENSONIG00000018078) #35 Midas cichlid DUPLICATION Midas cichlid MODERN SPECIES 595 ENSACIG00000008912 ENSACIG00000008905 bend5 (ENSACIG00000008860) ENSACIG00000008842 AGBL4 (ENSACIG00000008810) elavl4 (ENSACIG00000008793) dmrta2 (ENSACIG00000008749) faf1 (ENSACIG00000008712) ENSACIG00000008680 #22 rnf11b (ENSACIG00000008644) TTC39A (ENSACIG00000008612) EPS15 (ENSACIG00000008531) calr (ENSACIG00000008509) tor3a (ENSACIG00000008486) osbpl9 (ENSACIG00000008374) abl2 (ENSACIG00000008184) soat1 (ENSACIG00000008124) ENSACIG00000008065 ENSACIG00000008034 CACNA1E (ENSACIG00000007982) CEP350 (ENSACIG00000007837) qsox1 (ENSACIG00000007802) lhx4 (ENSACIG00000007782) acbd6 (ENSACIG00000007757) Midas cichlid MODERN SPECIES 1199 ENSACIG00000002373 serhl (ENSACIG00000002390) mb (ENSACIG00000002412) ENSACIG00000002427 zgc:158803 (ENSACIG00000002441) smdt1b (ENSACIG00000002454) KCNJ4 (ENSACIG00000002474) ENSACIG00000002643 rnaseh2a (ENSACIG00000002658) #16 MAST1 (ENSACIG00000002693) #17 atg4da (ENSACIG00000003005) #18 SMARCA4 (ENSACIG00000003035) #19 ENSACIG00000003107 ##20 ENSACIG00000003155 ##20 ap1m2 (ENSACIG00000003239) #21 CDKN2D (ENSACIG00000003266) #22 ENSACIG00000003274 #23 keap1b (ENSACIG00000003284) #24 s1pr5b (ENSACIG00000003324) #25 fdx2 (ENSACIG00000003335) #26 zglp1 (ENSACIG00000003353) #27 ENSACIG00000003377 #28 NEU3 (ENSACIG00000003385) #29 ENSACIG00000003395 #29 NEU3 (ENSACIG00000003415) #29 NEU3 (ENSACIG00000003494) #29 ENSACIG00000003519 #30 ENSACIG00000003529 HMOX1 (ENSACIG00000003536) #32 rnf11a (ENSACIG00000003661) #33 NFIX (ENSACIG00000003674) #34 Percomorphaceae_C ANCESTRAL SPECIES 3 ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT00650000094757 ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000177737 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 Eupercaria ANCESTRAL SPECIES 2 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT00650000094757 ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 ENSGT00940000157552.s.a #37 Tetraodontidae ANCESTRAL SPECIES 44 ENSGT00530000063960.g.b.f ENSGT00530000063960.g.b.e ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00940000175590 ENSGT00940000157140.b.b.a #28 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 ENSGT00940000157552.s.a #37 ENSGT00390000004368 Fugu MODERN SPECIES 8 ENSTRUG00000030710 serhl (ENSTRUG00000000033) mb (ENSTRUG00000000034) ENSTRUG00000000037 zgc:158803 (ENSTRUG00000000039) ENSTRUG00000026631 ENSTRUG00000030066 KCNJ4 (ENSTRUG00000027165) Sox10a (ENSTRUG00000033126) rnaseh2a (ENSTRUG00000000049) #16 MAST1 (ENSTRUG00000001299) #17 atg4da (ENSTRUG00000001314) #18 ENSTRUG00000002369 #20 ENSTRUG00000033211 ap1m2 (ENSTRUG00000003149) #21 cdkn2D (ENSTRUG00000003739) #22 ENSTRUG00000003757 #23 keap1b (ENSTRUG00000003855) #24 s1pr5b (ENSTRUG00000004396) #25 fdx2 (ENSTRUG00000004468) #26 ENSTRUG00000019733 ENSTRUG00000019645 #28 ENSTRUG00000021117 #30 ENSTRUG00000004540 #31 HMOX1 (ENSTRUG00000021266) #32 rnf11a (ENSTRUG00000027847) #33 NFIX (ENSTRUG00000005030) #34 charon (ENSTRUG00000005611) #35 tspan34 (ENSTRUG00000025232) #36 ENSTRUG00000005632 #37 pld6 (ENSTRUG00000005778) Tetraodon MODERN SPECIES 10 atf7ip (ENSTNIG00000007160) septin3 (ENSTNIG00000004228) serhl (ENSTNIG00000005517) mb (ENSTNIG00000005518) ENSTNIG00000001651 zgc:158803 (ENSTNIG00000005519) ENSTNIG00000004530 KCNJ4 (ENSTNIG00000004531) ENSTNIG00000004532 rnaseh2a (ENSTNIG00000004533) #16 MAST1 (ENSTNIG00000004534) #17 atg4da (ENSTNIG00000004535) #18 SMARCA4 (ENSTNIG00000004536) #19 ENSTNIG00000004537 #20 ap1m2 (ENSTNIG00000004538) #21 CDKN2D (ENSTNIG00000004539) #22 ENSTNIG00000004540 #23 keap1b (ENSTNIG00000004541) #24 s1pr5b (ENSTNIG00000004542) #25 ENSTNIG00000006132 ENSTNIG00000006133 #30 ENSTNIG00000006134 #31 HMOX1 (ENSTNIG00000006135) #32 rnf11a (ENSTNIG00000006136) #33 ENSTNIG00000004024 #34 NFIX (ENSTNIG00000003955) #34 dand5 (ENSTNIG00000006075) #35 tspan34 (ENSTNIG00000000549) #36 ENSTNIG00000006074 #37 pld6 (ENSTNIG00000006073) elof1 (ENSTNIG00000006072) Eupecaria_A ANCESTRAL SPECIES 3 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT00650000094757 ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00950000182944.A.b.c ##29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 Ballan wrasse MODERN SPECIES 287 serhl (ENSLBEG00000019986) mb (ENSLBEG00000020009) serhl (ENSLBEG00000020032) pane1 (ENSLBEG00000020088) zgc:158803 (ENSLBEG00000020118) smdt1b (ENSLBEG00000020160) ENSLBEG00000020143 ENSLBEG00000020228 ENSLBEG00000020466 rnaseh2a (ENSLBEG00000020494) #16 MAST1 (ENSLBEG00000020537) #17 atg4da (ENSLBEG00000020609) #18 SMARCA4 (ENSLBEG00000020655) #19 ENSLBEG00000020752 #20 ap1m2 (ENSLBEG00000020783) #21 CDKN2D (ENSLBEG00000020818) #22 ENSLBEG00000020827 #23 keap1b (ENSLBEG00000020837) #24 s1pr5b (ENSLBEG00000020859) #25 fdx2 (ENSLBEG00000020878) #26 ENSLBEG00000020889 ENSLBEG00000020905 #28 NEU3 (ENSLBEG00000020919) ##29 NEU3 (ENSLBEG00000020937) ##29 NEU3 (ENSLBEG00000020949) ##29 NEU3 (ENSLBEG00000020961) ##29 ENSLBEG00000020977 #30 ENSLBEG00000020993 #31 HMOX1 (ENSLBEG00000021015) #32 rnf11a (ENSLBEG00000021032) #33 NFIX (ENSLBEG00000021105) ##34 Eupecaria_B ANCESTRAL SPECIES 1 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT00650000094757 ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00950000182944.A.b.c ##29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 Eupecaria_C ANCESTRAL SPECIES 14 ENSGT00530000063960.g.b ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00950000182944.A.b.c.d ##29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 Eupercaria_incertae_sedis ANCESTRAL SPECIES 13 ENSGT00530000063960.g.b ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00950000182944.A.b.c.d ##29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 Large yellow croaker MODERN SPECIES 481 serhl (ENSLCRG00005009226) serhl (ENSLCRG00005009224) mb (ENSLCRG00005009223) pane1 (ENSLCRG00005009220) zgc:158803 (ENSLCRG00005009217) smdt1b (ENSLCRG00005009216) ENSLCRG00005009215 KCNJ4 (ENSLCRG00005009214) SOX10 (ENSLCRG00005009213) rnaseh2a (ENSLCRG00005009186) #16 MAST1 (ENSLCRG00005008792) #17 atg4da (ENSLCRG00005008780) #18 SMARCA4 (ENSLCRG00005007894) #19 ENSLCRG00005002982 #20 ap1m2 (ENSLCRG00005002656) #21 CDKN2D (ENSLCRG00005002639) #22 ENSLCRG00005002636 #23 keap1 (ENSLCRG00005002628) #24 s1pr5b (ENSLCRG00005002624) #25 fdx2 (ENSLCRG00005002620) #26 ENSLCRG00005002617 #27 ENSLCRG00005002614 #28 NEU3 (ENSLCRG00005002612) ##29 ENSLCRG00005002559 ##29 NEU3 (ENSLCRG00005002553) ##29 ENSLCRG00005002548 #30 ENSLCRG00005002542 #31 ENSLCRG00005002538 HMOX1 (ENSLCRG00005002532) #32 rnf11a (ENSLCRG00005002528) #33 NFIX (ENSLCRG00005002487) #34 Gilthead seabream MODERN SPECIES serhl (ENSSAUG00010025353) serhl (ENSSAUG00010025355) mb (ENSSAUG00010025356) ENSSAUG00010025357 zgc:158803 (ENSSAUG00010025358) smdt1b (ENSSAUG00010025359) ENSSAUG00010025362 KCNJ4 (ENSSAUG00010025363) SOX10 (ENSSAUG00010025364) rnaseh2a (ENSSAUG00010025366) #16 MAST1 (ENSSAUG00010025373) #17 atg4da (ENSSAUG00010025418) #18 SMARCA4 (ENSSAUG00010025426) #19 ENSSAUG00010025464 #20 ap1m2 (ENSSAUG00010025874) #21 CDKN2D (ENSSAUG00010002999) #22 ENSSAUG00010003007 #23 keap1b (ENSSAUG00010003018) #24 s1pr5b (ENSSAUG00010003030) #25 fdx2 (ENSSAUG00010003033) #26 ENSSAUG00010003043 #27 NEU3 (ENSSAUG00010003053) ##29 ENSSAUG00010003057 #30 ENSSAUG00010003063 #31 HMOX1 (ENSSAUG00010003067) #32 rnf11a (ENSSAUG00010003075) #33 NFIX (ENSSAUG00010003122) #34 dand5 (ENSSAUG00010003827) #35 tspan34 (ENSSAUG00010003831) #36 ENSSAUG00010003832 #37 pld6 (ENSSAUG00010003834) Perciformes ANCESTRAL SPECIES 2 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT00650000094757 ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.c ##29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 Cottioidei ANCESTRAL SPECIES 3 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT00650000094757 ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 ENSGT00940000157552.s.a #37 Lumpfish MODERN SPECIES ENSCLMG00005002697 mb (ENSCLMG00005002698) pane1 (ENSCLMG00005002699) zgc:158803 (ENSCLMG00005002700) smdt1b (ENSCLMG00005002701) ENSCLMG00005002702 ENSCLMG00005002703 ENSCLMG00005002704 rnaseh2a (ENSCLMG00005002705) #16 ENSCLMG00005002707 #17 ENSCLMG00005002709 #17 atg4da (ENSCLMG00005002712) #18 SMARCA4 (ENSCLMG00005002722) #19 ENSCLMG00005003849 #20 ap1m2 (ENSCLMG00005009306) #21 CDKN2D (ENSCLMG00005009709) #22 ENSCLMG00005009710 #23 keap1b (ENSCLMG00005009711) #24 s1pr5b (ENSCLMG00005009713) #25 fdx2 (ENSCLMG00005009714) #26 zglp1 (ENSCLMG00005009715) #27 ENSCLMG00005009716 #28 ENSCLMG00005009717 #30 ENSCLMG00005009718 #31 ENSCLMG00005009719 ENSCLMG00005009720 #32 rnf11a (ENSCLMG00005009721) #33 NFIX (ENSCLMG00005009722) #34 dand5 (ENSCLMG00005009726) #35 tspan34 (ENSCLMG00005009728) #36 RAB3D (ENSCLMG00005009866) #37 Stickleback MODERN SPECIES 4 BFAR (ENSGACG00000019548) ENSGACG00000019547 ENSGACG00000019545 ears2 (ENSGACG00000019531) ENSGACG00000019529 ENSGACG00000019526 ENSGACG00000019523 GTF3C1 (ENSGACG00000019516) AXIN1 (ENSGACG00000019513) thumpd1 (ENSGACG00000019511) ENSGACG00000019510 ENSGACG00000019507 parn (ENSGACG00000019501) ENSGACG00000019500 #20 ap1m2 (ENSGACG00000019492) #21 CDKN2D (ENSGACG00000019491) #22 ENSGACG00000019488 #23 ENSGACG00000019487 ENSGACG00000019486 keap1b (ENSGACG00000019479) #24 s1pr5b (ENSGACG00000019478) #25 fdx2 (ENSGACG00000019477) #26 ENSGACG00000019476 #30 ENSGACG00000019475 #31 ENSGACG00000019473 ##31 HMOX1 (ENSGACG00000019469) #32 rnf11a (ENSGACG00000019466) #33 ENSGACG00000019465 NFIX (ENSGACG00000019462) #34 dand5 (ENSGACG00000019460) #35 tspan34 (ENSGACG00000019454) #36 Perciformes_a ANCESTRAL SPECIES ENSGT00530000063960.g.b.j.a ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.c ##29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 Pike perch MODERN SPECIES 69 serhl (ENSSLUG00000015075) serhl (ENSSLUG00000015079) mb (ENSSLUG00000015086) ENSSLUG00000015093 zgc:158803 (ENSSLUG00000015101) smdt1b (ENSSLUG00000015111) ENSSLUG00000015124 SOX10 (ENSSLUG00000015215) rnaseh2a (ENSSLUG00000015229) #16 ENSSLUG00000015266 #17 MAST1 (ENSSLUG00000015278) #17 atg4da (ENSSLUG00000015299) #18 SMARCA4 (ENSSLUG00000016006) #19 ENSSLUG00000023970 #20 ap1m2 (ENSSLUG00000024580) #21 CDKN2D (ENSSLUG00000024686) #22 ENSSLUG00000024687 #23 keap1b (ENSSLUG00000024692) #24 s1pr5b (ENSSLUG00000024694) #25 fdx2 (ENSSLUG00000024696) #26 ENSSLUG00000024697 #27 ENSSLUG00000024698 #28 NEU3 (ENSSLUG00000024708) ##29 ENSSLUG00000024731 #31 ENSSLUG00000024733 #30 HMOX1 (ENSSLUG00000024735) #32 rnf11a (ENSSLUG00000024737) #33 NFIX (ENSSLUG00000024749) #34 dand5 (ENSSLUG00000024784) #35 tspan34 (ENSSLUG00000024786) #36 RAB3D (ENSSLUG00000024787) #37 Channel bull blenny MODERN SPECIES serhl (ENSCGOG00000020536) mb (ENSCGOG00000020540) ENSCGOG00000020551 zgc:158803 (ENSCGOG00000020554) smdt1b (ENSCGOG00000020607) ENSCGOG00000020606 ENSCGOG00000020609 ENSCGOG00000020610 SOX10 (ENSCGOG00000020612) rnaseh2a (ENSCGOG00000020614) #16 MAST1 (ENSCGOG00000020651) #17 atg4da (ENSCGOG00000020669) #18 SMARCA4 (ENSCGOG00000020723) #19 ENSCGOG00000021526 #20 ap1m2 (ENSCGOG00000021610) #21 CDKN2D (ENSCGOG00000021666) #22 ENSCGOG00000021669 #23 keap1b (ENSCGOG00000021671) #24 s1pr5b (ENSCGOG00000021673) #25 fdx2 (ENSCGOG00000021674) #26 ENSCGOG00000021676 #27 ENSCGOG00000021677 #28 NEU3 (ENSCGOG00000021678) ##29 ENSCGOG00000021679 #30 ENSCGOG00000021681 #31 ENSCGOG00000021685 HMOX1 (ENSCGOG00000021690) #32 rnf11a (ENSCGOG00000021688) #33 NFIX (ENSCGOG00000021693) #34 dand5 (ENSCGOG00000021720) #35 tspan34 (ENSCGOG00000021722) #36 Percomorphaceae_D ANCESTRAL SPECIES ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000177737 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00940000181262 ENSGT00940000165343.d ##31 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 Carangaria ANCESTRAL SPECIES ENSGT00530000063960.g.b ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b.f #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 ENSGT00940000157552.s.a #37 Carangaria_A ANCESTRAL SPECIES 14 ENSGT00530000063960.g.b ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b.f #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 ENSGT00940000157552.s.a #37 Seriola ANCESTRAL SPECIES 29 ENSGT00530000063960.g.b.a ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b.f #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d.i #29 ENSGT00950000182944.A.b.d.j #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 Yellowtail amberjack MODERN SPECIES 2982 serhl (ENSSLDG00000023844) serhl (ENSSLDG00000023833) mb (ENSSLDG00000023825) pane1 (ENSSLDG00000023816) zgc:158803 (ENSSLDG00000023807) smdt1b (ENSSLDG00000023802) ENSSLDG00000023792 ENSSLDG00000023789 SOX10 (ENSSLDG00000023781) rnaseh2a (ENSSLDG00000023766) #16 MAST1 (ENSSLDG00000023742) #17 atg4da (ENSSLDG00000023718) #18 SMARCA4 (ENSSLDG00000023663) #19 ENSSLDG00000023644 #20 ap1m2 (ENSSLDG00000023631) #21 CDKN2D (ENSSLDG00000023627) #22 ENSSLDG00000023625 #23 keap1b (ENSSLDG00000023620) #24 s1pr5b (ENSSLDG00000023617) #25 fdx2 (ENSSLDG00000023600) #26 ENSSLDG00000023581 #27 ENSSLDG00000023572 #28 NEU3 (ENSSLDG00000023565) #29 NEU3 (ENSSLDG00000023560) #29 ENSSLDG00000023552 #30 ENSSLDG00000023542 #31 HMOX1 (ENSSLDG00000023531) #32 rnf11a (ENSSLDG00000023520) #33 NFIX (ENSSLDG00000023509) #34 Greater amberjack MODERN SPECIES 214 ap1m2 (ENSSDUG00000023256) #21 CDKN2D (ENSSDUG00000023261) #22 ENSSDUG00000023263 #23 keap1b (ENSSDUG00000023265) #24 s1pr5b (ENSSDUG00000023268) #25 fdx2 (ENSSDUG00000023270) #26 ENSSDUG00000023273 #27 ENSSDUG00000023275 #28 NEU3 (ENSSDUG00000023278) #29 NEU3 (ENSSDUG00000023279) #29 ENSSDUG00000023281 #30 ENSSDUG00000023284 #31 HMOX1 (ENSSDUG00000023292) #32 rnf11a (ENSSDUG00000023294) #33 NFIX (ENSSDUG00000023300) #34 dand5 (ENSSDUG00000023316) #35 tspan34 (ENSSDUG00000023318) #36 Barramundi perch DUPLICATION Barramundi perch MODERN SPECIES 43 hsh2d (ENSLCAG00010027025) tax1bp3 (ENSLCAG00010027024) slc1a6 (ENSLCAG00010027021) ENSLCAG00010027020 pole4 (ENSLCAG00010027018) ENSLCAG00010027016 ccl25b (ENSLCAG00010027015) dnttip2 (ENSLCAG00010027011) spata6 (ENSLCAG00010027010) AGBL4 (ENSLCAG00010027008) bend5 (ENSLCAG00010027001) agbl4 (ENSLCAG00010026997) elavl4 (ENSLCAG00010026991) dmrta2 (ENSLCAG00010026986) faf1 (ENSLCAG00010026978) ENSLCAG00010026971 #22 rnf11b (ENSLCAG00010026970) TTC39A (ENSLCAG00010026966) ENSLCAG00010026955 calr (ENSLCAG00010026951) tor3a (ENSLCAG00010026949) osbpl9 (ENSLCAG00010026923) abl2 (ENSLCAG00010026920) soat1 (ENSLCAG00010026917) CACNA1E (ENSLCAG00010025963) ENSLCAG00010025365 qsox1 (ENSLCAG00010025349) lhx4 (ENSLCAG00010025342) acbd6 (ENSLCAG00010025337) xpr1a (ENSLCAG00010025321) sin3b (ENSLCAG00010025277) Barramundi perch MODERN SPECIES 113 ENSLCAG00010025898 serhl (ENSLCAG00010025881) mb (ENSLCAG00010025873) pane1 (ENSLCAG00010025871) zgc:158803 (ENSLCAG00010025868) smdt1b (ENSLCAG00010025863) ENSLCAG00010025859 ENSLCAG00010025857 SOX10 (ENSLCAG00010025851) rnaseh2a (ENSLCAG00010025845) #16 MAST1 (ENSLCAG00010025816) #17 atg4da (ENSLCAG00010025792) #18 SMARCA4 (ENSLCAG00010025736) #19 ENSLCAG00010025594 #20 ap1m2 (ENSLCAG00010025411) #21 CDKN2D (ENSLCAG00010025359) #22 ENSLCAG00010025351 #23 keap1b (ENSLCAG00010025348) #24 s1pr5b (ENSLCAG00010025347) #25 fdx2 (ENSLCAG00010025344) #26 ENSLCAG00010025338 #27 ENSLCAG00010025336 #28 ENSLCAG00010025333 ENSLCAG00010025331 #29 ENSLCAG00010025327 #29 ENSLCAG00010025325 #29 ENSLCAG00010025324 #29 ENSLCAG00010025320 #30 ENSLCAG00010025315 ##31 HMOX1 (ENSLCAG00010025306) #32 rnf11a (ENSLCAG00010025300) #33 Pleuronectoidei ANCESTRAL SPECIES 21 ENSGT00530000063960.g.b ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b.f #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 ENSGT00940000157552.s.a #37 ENSGT00390000004368 Tongue sole MODERN SPECIES 19 rgs12b (ENSCSEG00000014005) chrna6 (ENSCSEG00000013997) ENSCSEG00000013985 ENSCSEG00000013967 zgc:195282 (ENSCSEG00000013954) pi4k2b (ENSCSEG00000013924) htra3a (ENSCSEG00000013897) GPR78 (ENSCSEG00000013891) CPZ (ENSCSEG00000013882) hmx4 (ENSCSEG00000013877) hmx1 (ENSCSEG00000013871) adra2c (ENSCSEG00000013863) lrpap1 (ENSCSEG00000013834) DOK7 (ENSCSEG00000013814) ap1m2 (ENSCSEG00000013803) #21 CDKN2D (ENSCSEG00000013798) #22 ENSCSEG00000013791 #23 keap1b (ENSCSEG00000013786) #24 s1pr5b (ENSCSEG00000013780) #25 fdx2 (ENSCSEG00000013776) #26 ENSCSEG00000013771 #27 ENSCSEG00000013767 #30 ENSCSEG00000013762 #31 rnf11a (ENSCSEG00000013753) #33 NFIX (ENSCSEG00000013646) #34 dand5 (ENSCSEG00000013627) #35 ENSCSEG00000013616 #36 pld6 (ENSCSEG00000013610) elof1 (ENSCSEG00000013606) PLPPR2 (ENSCSEG00000013598) ENSCSEG00000013590 Turbot DUPLICATION Turbot MODERN SPECIES 3 acot11b (ENSSMAG00000007286) ssbp3b (ENSSMAG00000007250) dio1 (ENSSMAG00000007191) dio1 (ENSSMAG00000028072) ENSSMAG00000007156 ENSSMAG00000007119 ENSSMAG00000007069 ENSSMAG00000007049 dnttip2 (ENSSMAG00000007037) ENSSMAG00000026136 ENSSMAG00000007019 AGBL4 (ENSSMAG00000006977) elavl4 (ENSSMAG00000006881) dmrta2 (ENSSMAG00000006876) faf1 (ENSSMAG00000006842) ENSSMAG00000006636 #22 rnf11b (ENSSMAG00000030524) TTC39A (ENSSMAG00000006580) ENSSMAG00000006542 calr (ENSSMAG00000006479) tor3a (ENSSMAG00000006472) osbpl9 (ENSSMAG00000006210) abl2 (ENSSMAG00000006075) soat1 (ENSSMAG00000006059) ENSSMAG00000005967 ENSSMAG00000005761 ENSSMAG00000005776 CEP350 (ENSSMAG00000005713) qsox1 (ENSSMAG00000005701) lhx4 (ENSSMAG00000005678) acbd6 (ENSSMAG00000005658) Turbot MODERN SPECIES 20 septin3 (ENSSMAG00000013826) ENSSMAG00000021663 serhl (ENSSMAG00000021742) serhl (ENSSMAG00000013860) mb (ENSSMAG00000035935) ENSSMAG00000013896 zgc:158803 (ENSSMAG00000013905) ENSSMAG00000013932 ENSSMAG00000013938 ENSSMAG00000013959 ENSSMAG00000013970 ENSSMAG00000014004 #17 ENSSMAG00000014050 #18 ENSSMAG00000014211 #20 ap1m2 (ENSSMAG00000014240) #21 ENSSMAG00000030085 #22 ENSSMAG00000014293 #23 s1pr5b (ENSSMAG00000014302) #25 fdx2 (ENSSMAG00000014312) #26 ENSSMAG00000034429 #27 ENSSMAG00000014340 #28 ENSSMAG00000014349 #30 ENSSMAG00000014359 #31 HO-1 (ENSSMAG00000030685) #32 rnf11a (ENSSMAG00000014402) #33 ENSSMAG00000014430 #34 dand5 (ENSSMAG00000014617) #35 ENSSMAG00000014639 #36 ENSSMAG00000014671 #37 ENSSMAG00000014684 ENSSMAG00000027463 Anabantaria ANCESTRAL SPECIES 1 ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000177737 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00940000181262 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 ENSGT00940000157552.s.a #37 Zig-zag eel MODERN SPECIES serhl (ENSMAMG00000003995) ENSMAMG00000004067 mb (ENSMAMG00000003974) ENSMAMG00000003936 zgc:158803 (ENSMAMG00000003914) ENSMAMG00000003891 ENSMAMG00000003879 ENSMAMG00000003152 ENSMAMG00000003107 ENSMAMG00000026089 #16 ENSMAMG00000002992 #17 ENSMAMG00000002970 #18 ENSMAMG00000002841 #19 ENSMAMG00000002789 #20 ap1m2 (ENSMAMG00000002700) #21 ENSMAMG00000025026 #22 ENSMAMG00000002687 #23 keap1b (ENSMAMG00000002679) #24 s1pr5b (ENSMAMG00000002676) #25 fdx2 (ENSMAMG00000002665) #26 ENSMAMG00000025847 #27 ENSMAMG00000002648 #28 ENSMAMG00000002631 #30 ENSMAMG00000027487 #31 ENSMAMG00000027973 ENSMAMG00000002595 #32 rnf11a (ENSMAMG00000027180) #33 ENSMAMG00000002467 #34 dand5 (ENSMAMG00000002436) #35 ENSMAMG00000002427 #36 ENSMAMG00000002400 #37 Anabantoidei ANCESTRAL SPECIES ENSGT00530000063960.g.a ENSGT00940000160809 ENSGT00390000017504 ENSGT00950000183213.a.a.a ENSGT00390000017489.b ENSGT00940000157340.k.a ENSGT01030000234586.A.b.a ENSGT00940000158046.a.b ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000177737 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 ENSGT00940000157552.s.a #37 ENSGT00390000004368 Climbing perch MODERN SPECIES serhl (ENSATEG00000000406) mb (ENSATEG00000000416) ENSATEG00000000430 zgc:158803 (ENSATEG00000000437) ENSATEG00000027300 ENSATEG00000000458 ENSATEG00000000464 ENSATEG00000000870 ENSATEG00000000908 #16 ENSATEG00000000943 #17 ENSATEG00000001031 #18 ENSATEG00000001094 #19 ENSATEG00000002785 #20 ENSATEG00000002793 ap1m2 (ENSATEG00000002811) #21 ENSATEG00000002865 #22 keap1b (ENSATEG00000002872) #24 s1pr5b (ENSATEG00000002909) #25 fdx2 (ENSATEG00000002919) #26 ENSATEG00000026180 #27 ENSATEG00000025191 #28 ENSATEG00000002944 #30 ENSATEG00000029628 #31 ENSATEG00000002962 #32 ENSATEG00000002973 #33 NFIX (ENSATEG00000003018) #34 ENSATEG00000003118 #36 ENSATEG00000003157 #37 ENSATEG00000003181 ENSATEG00000026771 ENSATEG00000029063 Siamese fighting fish DUPLICATION Siamese fighting fish MODERN SPECIES 15 tax1bp3 (ENSBSLG00000006164) slc1a6 (ENSBSLG00000006168) ENSBSLG00000006186 pole4 (ENSBSLG00000006189) ENSBSLG00000006193 ccl25b (ENSBSLG00000006207) gclm (ENSBSLG00000006210) dnttip2 (ENSBSLG00000006215) ENSBSLG00000006218 ENSBSLG00000006219 AGBL4 (ENSBSLG00000006221) bend5 (ENSBSLG00000006226) elavl4 (ENSBSLG00000006228) dmrta2 (ENSBSLG00000006289) faf1 (ENSBSLG00000006832) ENSBSLG00000007629 #22 rnf11b (ENSBSLG00000007635) TTC39A (ENSBSLG00000007641) ENSBSLG00000007708 EPS15 (ENSBSLG00000007929) calr (ENSBSLG00000008939) tor3a (ENSBSLG00000009065) osbpl9 (ENSBSLG00000000740) abl2 (ENSBSLG00000000959) soat1 (ENSBSLG00000000984) soat1 (ENSBSLG00000001015) CACNA1E (ENSBSLG00000001891) CEP350 (ENSBSLG00000002121) qsox1 (ENSBSLG00000002125) lhx4 (ENSBSLG00000002126) acbd6 (ENSBSLG00000002171) Siamese fighting fish MODERN SPECIES mb (ENSBSLG00000009908) mettl14 (ENSBSLG00000009847) mb (ENSBSLG00000009826) ENSBSLG00000009814 zgc:158803 (ENSBSLG00000009773) smdt1b (ENSBSLG00000009756) ENSBSLG00000009704 KCNJ4 (ENSBSLG00000009531) ENSBSLG00000009520 rnaseh2a (ENSBSLG00000009501) #16 ENSBSLG00000007984 #17 atg4da (ENSBSLG00000007401) #18 SMARCA4 (ENSBSLG00000007283) #19 ENSBSLG00000005904 #20 ap1m2 (ENSBSLG00000005447) #21 CDKN2D (ENSBSLG00000005390) #22 ENSBSLG00000005374 #23 keap1b (ENSBSLG00000005218) #24 s1pr5b (ENSBSLG00000005182) #25 fdx2 (ENSBSLG00000005155) #26 ENSBSLG00000005130 #27 ENSBSLG00000005116 #28 ENSBSLG00000005091 #30 ENSBSLG00000005031 #31 HMOX1 (ENSBSLG00000004992) #32 rnf11a (ENSBSLG00000004959) #33 NFIX (ENSBSLG00000016432) #34 dand5 (ENSBSLG00000016422) #35 tspan34 (ENSBSLG00000016418) #36 ENSBSLG00000016412 #37 pld6 (ENSBSLG00000016408) Tiger tail seahorse MODERN SPECIES 518 ENSHCOG00000016359 ENSHCOG00000000458 zgc:158803 (ENSHCOG00000016391) ENSHCOG00000016398 ENSHCOG00000016404 KCNJ4 (ENSHCOG00000016525) ENSHCOG00000016569 rnaseh2a (ENSHCOG00000016593) #16 ENSHCOG00000016696 #17 MAST1 (ENSHCOG00000016730) #17 atg4da (ENSHCOG00000016797) #18 ENSHCOG00000016821 #19 ENSHCOG00000016836 #19 ENSHCOG00000016845 #20 ap1m2 (ENSHCOG00000016877) #21 CDKN2D (ENSHCOG00000016885) #22 ENSHCOG00000016889 #23 keap1b (ENSHCOG00000016897) #24 s1pr5b (ENSHCOG00000016900) #25 fdx2 (ENSHCOG00000016915) #26 ENSHCOG00000016944 #27 ENSHCOG00000016954 #28 ENSHCOG00000016961 #30 ENSHCOG00000016983 #31 HMOX1 (ENSHCOG00000016995) #32 rnf11a (ENSHCOG00000017008) #33 NFIX (ENSHCOG00000017088) #34 dand5 (ENSHCOG00000017105) #35 tspan34 (ENSHCOG00000017111) #36 RAB3D (ENSHCOG00000017123) #37 pld6 (ENSHCOG00000017130) Pinecone sodierfish MODERN SPECIES mb (ENSMMDG00005024881) pane1 (ENSMMDG00005024880) zgc:158803 (ENSMMDG00005024878) smdt1b (ENSMMDG00005024877) ENSMMDG00005024876 ENSMMDG00005024875 SOX10 (ENSMMDG00005024874) rnaseh2a (ENSMMDG00005024873) #16 ENSMMDG00005024872 ENSMMDG00005024871 #17 ENSMMDG00005024870 #17 atg4da (ENSMMDG00005024869) #18 SMARCA4 (ENSMMDG00005024868) #19 ENSMMDG00005024867 #20 ap1m2 (ENSMMDG00005024866) #21 CDKN2D (ENSMMDG00005024865) #22 ENSMMDG00005024864 keap1b (ENSMMDG00005024863) #24 s1pr5b (ENSMMDG00005024862) #25 fdx2 (ENSMMDG00005024861) #26 zglp1 (ENSMMDG00005024860) #27 ENSMMDG00005024859 #28 ENSMMDG00005024858 #30 ENSMMDG00005024857 HMOX1 (ENSMMDG00005024856) #32 rnf11a (ENSMMDG00005024855) #33 NFIX (ENSMMDG00005024854) #34 dand5 (ENSMMDG00005024853) #35 ENSMMDG00005024852 #36 RAB3D (ENSMMDG00005024851) #37 pld6 (ENSMMDG00005024850) Cod MODERN SPECIES 16 ENSGMOG00000037137 serhl (ENSGMOG00000005458) Myg (ENSGMOG00000022467) ENSGMOG00000005495 zgc:158803 (ENSGMOG00000005508) ENSGMOG00000005537 ENSGMOG00000025230 ENSGMOG00000030910 ENSGMOG00000005629 ENSGMOG00000005650 #16 ENSGMOG00000005677 #17 ENSGMOG00000024902 #18 ENSGMOG00000005756 #19 ENSGMOG00000017252 #20 ap1m2 (ENSGMOG00000017224) #21 ENSGMOG00000017215 #22 ENSGMOG00000017211 #23 keap1b (ENSGMOG00000017172) #24 ENSGMOG00000025173 ENSGMOG00000025550 ENSGMOG00000026676 ENSGMOG00000009442 ENSGMOG00000009456 ENSGMOG00000009476 ENSGMOG00000025336 ENSGMOG00000036296 ENSGMOG00000035376 ENSGMOG00000022935 ENSGMOG00000009754 ENSGMOG00000009669 ENSGMOG00000009712 Protacanthopterygii ANCESTRAL SPECIES 59 ENSGT00940000155809.o ENSGT00940000159529 ENSGT00580000081628 ENSGT01030000234642.a.a ENSGT00390000015948.b ENSGT00390000009265 ENSGT00940000156270 ENSGT00940000161451.a.a ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b #20 ENSGT00940000177737 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.a.a ##36 ENSGT00940000164506.b.a #36 ENSGT00940000157552.s.a #37 ENSGT00390000004368 ENSGT00390000000053.a Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 14 ENSGT00580000081628 ENSGT01030000234642.a.a ENSGT00390000015948.b.d ENSGT00390000009265 ENSGT00940000156270 ENSGT00940000161451.a.a.d ENSGT00940000161451.a.a.c.b ENSGT00390000010768 #16 ENSGT00940000157700.c.r #17 ENSGT00530000063000.a.a.b.i.d ##18 ENSGT00940000157700.c.q #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b #20 ENSGT00940000159089.e #21 ENSGT00940000159801.B.c #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143.i.b #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.b.d ##28 ENSGT00940000166140.a.a #30 ENSGT00940000165343.d ##31 ENSGT00390000012436.h.c ENSGT00390000017673.b.k.d #32 ENSGT00940000166140.a.b #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h.d ENSGT00390000017673.b.k.c.b #32 ENSGT00390000017673.b.k.c.a #32 Salmoninae_a DUPLICATION Salmoninae_a ANCESTRAL SPECIES 33 ENSGT00940000155257.b.a ENSGT00940000155809.o.c ENSGT00940000159529.c.a ENSGT00580000081628 ENSGT01030000234642.a.a ENSGT00390000015948.b.d ENSGT00390000009265 ENSGT00940000156270.e ENSGT00940000161451.a.a.d ENSGT00390000010768.h.b #16 ENSGT00940000157700.c.r #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b #20 ENSGT00940000159089.e #21 ENSGT00940000159801.B.c.a #22 ENSGT00940000165948.k #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143.i.b #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.b.d ##28 ENSGT00940000166140.a.b #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h.c ENSGT00390000017673.b.k.d #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a.c.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a.e.a #36 ENSGT00940000157552.s.a.a #37 Salmo ANCESTRAL SPECIES 79 ENSGT00940000155257.b.a ENSGT00940000155809.o.c.b ENSGT00940000159529.c.b ENSGT00940000159529.c.a.e ENSGT00580000081628.j ENSGT01030000234642.a.a.d ENSGT00390000015948.b.c.b ENSGT00940000156270.e ENSGT00940000161451.a.a.c.a ENSGT00390000010768.h.b #16 ENSGT00940000157700.c.r #17 ENSGT00530000063000.a.a.b.j.g #18 ENSGT00940000156887.b.i #19 ENSGT00940000154819.a.b.c.b.e #20 ENSGT00940000159089.e #21 ENSGT00940000159801.B.c.a #22 ENSGT00940000165948.l #23 ENSGT00940000159543.a #24 ENSGT01050000244887.A.a.a.a.i.j #25 ENSGT00940000161143.i.b #26 ENSGT00470000042444.a.a #27 ENSGT00940000157140.b.b.b.d.a ##28 ENSGT00940000166140.a.a #30 ENSGT00940000165343.c.a.f #31 ENSGT00390000012436.h.d ENSGT00940000163721.t.a #33 ENSGT00950000182916.a.b.a.a.a.b.a.a.c.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.a.a ##36 ENSGT00940000164506.b.a.e.a.a #36 ENSGT00940000157552.s.a.a #37 Atlantic salmon MODERN SPECIES 11 ADD3 (ENSSSAG00000000431) MXI1 (ENSSSAG00000028007) dusp5 (ENSSSAG00000007089) smc3 (ENSSSAG00000020922) RBM20 (ENSSSAG00000020216) pdcd4 (ENSSSAG00000012709) shoc2 (ENSSSAG00000010861) adra2a (ENSSSAG00000010836) ENSSSAG00000007380 #16 ENSSSAG00000095214 ENSSSAG00000010449 #17 ENSSSAG00000120604 #18 ENSSSAG00000001534 #19 ENSSSAG00000000924 #20 ENSSSAG00000000837 #21 cdn2d (ENSSSAG00000000830) #22 ENSSSAG00000119700 #23 ENSSSAG00000101878 keap1b (ENSSSAG00000059599) #24 s1pr5b (ENSSSAG00000103422) #25 ENSSSAG00000112778 #27 ENSSSAG00000100662 ##28 ENSSSAG00000039388 #30 ENSSSAG00000039368 #31 ENSSSAG00000039415 #32 ENSSSAG00000094474 #33 ENSSSAG00000090884 #34 ENSSSAG00000119130 ENSSSAG00000000404 ##36 ENSSSAG00000000395 #36 ENSSSAG00000115616 River trout MODERN SPECIES 31 mxi1 (ENSSTUG00000035932) dusp5 (ENSSTUG00000035949) smc3 (ENSSTUG00000035960) RBM20 (ENSSTUG00000036000) pdcd4b (ENSSTUG00000036027) bbip1 (ENSSTUG00000036752) shoc2 (ENSSTUG00000036759) adra2a (ENSSTUG00000036789) rnaseh2a (ENSSTUG00000036814) #16 MAST1 (ENSSTUG00000036970) #17 atg4da (ENSSTUG00000037257) #18 SMARCA4 (ENSSTUG00000037345) #19 ENSSTUG00000040557 #20 ENSSTUG00000044422 AP1M2 (ENSSTUG00000044456) #21 CDKN2D (ENSSTUG00000044759) #22 ENSSTUG00000044764 #23 keap1b (ENSSTUG00000044774) #24 s1pr5b (ENSSTUG00000044895) #25 fdx2 (ENSSTUG00000044907) #26 ENSSTUG00000044914 #27 ENSSTUG00000044924 ##28 ENSSTUG00000044938 #30 ENSSTUG00000044941 #31 ENSSTUG00000044957 ENSSTUG00000044969 #32 ENSSTUG00000045001 rnf11a (ENSSTUG00000045005) #33 NFIX (ENSSTUG00000045022) #34 dand5 (ENSSTUG00000045174) #35 ENSSTUG00000045190 ##36 Oncorhynchus ANCESTRAL SPECIES 1 ENSGT00940000155809.o.c ENSGT01040000240969.a ENSGT00940000159529.c.a ENSGT00580000081628 ENSGT01030000234642.a.a ENSGT00390000015948.b.d ENSGT00390000009265 ENSGT00940000156270.e ENSGT00940000161451.a.a.d ENSGT00390000010768.h.b #16 ENSGT00940000157700.c.r #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b #20 ENSGT00940000159089.e #21 ENSGT00940000159801.B.c.a #22 ENSGT00940000165948.k.a.a #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143.i.b #26 ENSGT00470000042444.c.a #27 ENSGT00940000157140.b.b.b.d.c ##28 ENSGT00940000166140.a.b #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h.c ENSGT00390000017673.b.k.d #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a.d #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a.f.b #36 ENSGT00940000164506.a.a ##36 Oncorhynchus_a ANCESTRAL SPECIES 125 ENSGT01030000234642.a.a ENSGT00390000015948.b.d ENSGT01030000235307 ENSGT00940000156270.e ENSGT00940000161451.a.a.d ENSGT00390000010768.h.b #16 ENSGT00940000157700.c.r #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b #20 ENSGT00940000159089.f #21 ENSGT00940000159801.B.c.a #22 ENSGT00940000165948.k.a.a #23 ENSGT00940000165948.k.a.b #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143.i.b #26 ENSGT00470000042444.d #27 ENSGT00940000157140.b.b.b.d.d ##28 ENSGT00940000166140.a.b #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h.d ENSGT00390000017673.b.k.d.a #32 ENSGT00940000163721 #33 ENSGT00390000012078.a.b.c ENSGT00950000182916.a.b.a.a.a.b.a.b.n ##34 ENSGT00530000063926.b #35 Coho salmon DUPLICATION Coho salmon MODERN SPECIES 12 ENSOKIG00005028006 ##36 ENSOKIG00005027881 #36 ENSOKIG00005027788 #37 pld6 (ENSOKIG00005027774) ENSOKIG00005027761 PLPPR2 (ENSOKIG00005027738) mxi1 (ENSOKIG00005027709) ENSOKIG00005027703 ADD3 (ENSOKIG00005027429) ENSOKIG00005027383 ABAT (ENSOKIG00005025284) ENSOKIG00005025136 ENSOKIG00005025121 CREBBP (ENSOKIG00005025106) AP1M2 (ENSOKIG00005024414) #21 CDKN2D (ENSOKIG00005025085) #22 ENSOKIG00005024389 #23 keap1b (ENSOKIG00005024351) #24 ENSOKIG00005021476 #20 ENSOKIG00005021293 #17 ENSOKIG00005021279 SHOC2 (ENSOKIG00005021256) ADRA2A (ENSOKIG00005021247) ENSOKIG00005021243 ENSOKIG00005021229 pdcd4b (ENSOKIG00005021221) ENSOKIG00005021207 ENSOKIG00005021195 #33 ENSOKIG00005021147 #32 ENSOKIG00005021132 ENSOKIG00005021118 #32 Coho salmon MODERN SPECIES ENSOKIG00005027574 ENSOKIG00005027567 ENSOKIG00005027553 RBM20 (ENSOKIG00005027529) pdcd4b (ENSOKIG00005026471) bbip1 (ENSOKIG00005026413) shoc2 (ENSOKIG00005026396) adra2a (ENSOKIG00005026391) rnaseh2a (ENSOKIG00005026346) #16 ENSOKIG00005026329 MAST1 (ENSOKIG00005025942) #17 atg4da (ENSOKIG00005025851) #18 SMARCA4 (ENSOKIG00005024660) #19 ENSOKIG00005021547 #20 AP1M2 (ENSOKIG00005020441) #21 CDKN2D (ENSOKIG00005021389) #22 ENSOKIG00005020370 #23 keap1b (ENSOKIG00005020303) #24 s1pr5b (ENSOKIG00005020277) #25 fdx2 (ENSOKIG00005020273) #26 ENSOKIG00005020266 #27 ENSOKIG00005020244 ##28 ENSOKIG00005020238 #30 ENSOKIG00005020227 #31 ENSOKIG00005020215 #32 rnf11a (ENSOKIG00005020210) #33 ENSOKIG00005020207 ENSOKIG00005020202 NFIX (ENSOKIG00005020079) #34 dand5 (ENSOKIG00005020059) #35 ENSOKIG00005009859 #36 Rainbow trout MODERN SPECIES 4 dusp5 (ENSOMYG00000073914) smc3 (ENSOMYG00000071533) RBM20 (ENSOMYG00000063331) pdcd4b (ENSOMYG00000007073) bbip1 (ENSOMYG00000007091) shoc2 (ENSOMYG00000009051) adra2a (ENSOMYG00000009116) ENSOMYG00000032267 #16 ENSOMYG00000076437 ENSOMYG00000006242 ENSOMYG00000069973 #17 ENSOMYG00000060444 #18 ENSOMYG00000009750 #19 ENSOMYG00000010728 #20 ENSOMYG00000011167 #21 ENSOMYG00000011413 #22 ENSOMYG00000011424 #23 keap1b (ENSOMYG00000011445) #24 s1pr5b (ENSOMYG00000066942) #25 fdx2 (ENSOMYG00000007009) #26 ENSOMYG00000065341 #27 ENSOMYG00000007049 ##28 ENSOMYG00000034636 #30 ENSOMYG00000034627 #31 ENSOMYG00000060084 ENSOMYG00000034574 #32 ENSOMYG00000011475 #33 ENSOMYG00000067255 #34 ENSOMYG00000075789 ENSOMYG00000011600 #37 ENSOMYG00000039118 #35 Salmoninae_a ANCESTRAL SPECIES ENSGT00940000159801.B.c.b #22 Oncorhynchus ANCESTRAL SPECIES 495 ENSGT00940000159801.B.c.b #22 ENSGT00940000165948.k.a.b #23 Rainbow trout MODERN SPECIES 8 dusp5 (ENSOMYG00000049403) smc3 (ENSOMYG00000010295) RBM20 (ENSOMYG00000009882) pdcd4b (ENSOMYG00000009912) bbip1 (ENSOMYG00000009143) shoc2 (ENSOMYG00000050955) adra2a (ENSOMYG00000077571) ENSOMYG00000077793 #16 ENSOMYG00000076744 ENSOMYG00000065508 ENSOMYG00000057174 #17 ENSOMYG00000009349 #18 ENSOMYG00000010588 #19 ENSOMYG00000056046 #20 ENSOMYG00000066058 #21 ENSOMYG00000056829 #22 ENSOMYG00000074612 #23 keap1b (ENSOMYG00000058246) #24 s1pr5b (ENSOMYG00000006845) #25 fdx2 (ENSOMYG00000048092) #26 ENSOMYG00000006941 #27 ENSOMYG00000007070 ##28 ENSOMYG00000070142 #30 ENSOMYG00000071344 #31 ENSOMYG00000076070 ENSOMYG00000071975 #32 ENSOMYG00000060443 rnf11a (ENSOMYG00000043465) #33 ENSOMYG00000050973 #34 dand5 (ENSOMYG00000070027) #35 ENSOMYG00000065896 ##36 Salmo ANCESTRAL SPECIES ENSGT00940000159801.B.c.b #22 River trout MODERN SPECIES 5 mxi1 (ENSSTUG00000046628) dusp5 (ENSSTUG00000046615) ENSSTUG00000046610 smc3 (ENSSTUG00000046554) RBM20 (ENSSTUG00000046530) pdcd4b (ENSSTUG00000046044) bbip1 (ENSSTUG00000046022) shoc2 (ENSSTUG00000045994) adra2a (ENSSTUG00000045983) rnaseh2a (ENSSTUG00000045957) #16 MAST1 (ENSSTUG00000045793) #17 atg4da (ENSSTUG00000045777) #18 SMARCA4 (ENSSTUG00000043678) #19 ENSSTUG00000039191 #20 AP1M2 (ENSSTUG00000039048) #21 CDKN2D (ENSSTUG00000039035) #22 ENSSTUG00000039030 #23 keap1b (ENSSTUG00000038417) #24 s1pr5b (ENSSTUG00000038384) #25 fdx2 (ENSSTUG00000038372) #26 ENSSTUG00000038363 #27 ENSSTUG00000038340 ##28 ENSSTUG00000038333 #30 ENSSTUG00000038329 #31 ENSSTUG00000038318 ENSSTUG00000038287 #32 rnf11a (ENSSTUG00000038274) #33 NFIX (ENSSTUG00000038221) ##34 ENSSTUG00000038188 ##36 tspan34 (ENSSTUG00000038169) #36 RAB3D (ENSSTUG00000038123) #37 Huchen MODERN SPECIES 3210 ENSHHUG00000018989 #20 AP1M2 (ENSHHUG00000019047) #21 CDKN2D (ENSHHUG00000019167) #22 ENSHHUG00000019170 #23 keap1b (ENSHHUG00000019174) #24 s1pr5b (ENSHHUG00000019204) #25 Salmoninae ANCESTRAL SPECIES 1561 ENSGT00940000159089.f #21 ENSGT00940000159801.B.d #22 Huchen MODERN SPECIES 1637 ENSHHUG00000032783 ENSHHUG00000032785 ENSHHUG00000032788 #17 ENSHHUG00000032790 #17 SMARCA4 (ENSHHUG00000032794) #19 ENSHHUG00000033245 #20 AP1M2 (ENSHHUG00000034024) #21 CDKN2D (ENSHHUG00000034356) #22 ENSHHUG00000034366 #23 keap1b (ENSHHUG00000034372) #24 ENSHHUG00000034405 s1pr5b (ENSHHUG00000034409) #25 fdx2 (ENSHHUG00000034413) #26 ENSHHUG00000034416 ENSHHUG00000034422 ##28 Salmoninae_a ANCESTRAL SPECIES 500 ENSGT00940000159089.f #21 ENSGT00940000159801.B.d #22 Salmo ANCESTRAL SPECIES 75 ENSGT00940000155809.o.c.a ENSGT00940000159529.c.a.f ENSGT00580000081628.i ENSGT01030000234642.a.a.c ENSGT00390000015948.b.c.a ENSGT00940000156270.f ENSGT00940000161451.a.a.c.b ENSGT00390000010768.h.a #16 ENSGT00390000009265 ENSGT00940000157700.c.q #17 ENSGT00530000063000.a.a.b.j.h #18 ENSGT00940000156887.b.j #19 ENSGT00940000154819.a.b.c.b.f #20 ENSGT00940000159089.f #21 ENSGT00940000159801.B.d #22 ENSGT00940000165948.k #23 ENSGT00940000159543.b #24 ENSGT01050000244887.A.a.a.a.i.i #25 ENSGT00940000161143.i.a #26 ENSGT00470000042444.b #27 ENSGT00940000157140.b.b.b.d.b ##28 ENSGT00940000166140.b #30 ENSGT00940000166140.a.b #30 ENSGT00940000165343.c.a.e #31 ENSGT00390000012436.h.c ENSGT00390000017673.b.k.d #32 ENSGT00940000163721.t.b #33 ENSGT00950000182916.a.b.a.a.a.b.a.a.c.a.b #34 ENSGT00940000164506.b.a.e.a.b #36 ENSGT00940000157552.s.a.b #37 Atlantic salmon MODERN SPECIES 3 MXI1 (ENSSSAG00000007073) dusp5 (ENSSSAG00000027885) smc3 (ENSSSAG00000007113) RBM20 (ENSSSAG00000007161) pdcd4b (ENSSSAG00000007194) shoc2 (ENSSSAG00000007350) ENSSSAG00000116566 adra2a (ENSSSAG00000007378) ENSSSAG00000007077 #16 ENSSSAG00000007449 #17 ENSSSAG00000007403 ENSSSAG00000007658 #18 ENSSSAG00000007791 #19 ENSSSAG00000039549 #20 ENSSSAG00000059187 #21 ENSSSAG00000059525 #22 ENSSSAG00000059543 #23 keap1b (ENSSSAG00000000789) #24 s1pr5b (ENSSSAG00000109157) #25 ENSSSAG00000000748 #27 ENSSSAG00000063503 ##28 ENSSSAG00000000738 #30 ENSSSAG00000111482 ENSSSAG00000000734 #31 ENSSSAG00000105344 ENSSSAG00000000719 #32 rnf11a (ENSSSAG00000000704) #33 ENSSSAG00000000674 #34 ENSSSAG00000109061 ENSSSAG00000119542 dand5 (ENSSSAG00000097215) #35 Oncorhynchus ANCESTRAL SPECIES 319 ENSGT00940000159089.f #21 ENSGT00940000159801.B.d #22 ENSGT00940000165948.k.b #23 Oncorhynchus_a ANCESTRAL SPECIES 649 ENSGT00940000159801.B.d #22 ENSGT00940000165948.k.b #23 Chinook salmon MODERN SPECIES 25 cbx6a (ENSOTSG00005044971) nptxrb (ENSOTSG00005044972) ENSOTSG00005044973 ENSOTSG00005044975 ENSOTSG00005044977 GOT1 (ENSOTSG00005044978) CNNM1 (ENSOTSG00005044980) hoga1 (ENSOTSG00005044985) NKX2-3 (ENSOTSG00005044988) slc25a28 (ENSOTSG00005044989) ENSOTSG00005044991 ENSOTSG00005044992 ENSOTSG00005044993 #19 ENSOTSG00005045011 #20 ap1m2 (ENSOTSG00005046503) #21 CDKN2D (ENSOTSG00005036322) #22 ENSOTSG00005036339 #23 keap1b (ENSOTSG00005036359) #24 KCNJ4 (ENSOTSG00005036361) SOX10 (ENSOTSG00005036362) si:dkey-43k4.3 (ENSOTSG00005036363) ENSOTSG00005036364 gga1 (ENSOTSG00005036367) ENSOTSG00005037691 get3 (ENSOTSG00005037717) BEST2 (ENSOTSG00005037719) JUNB (ENSOTSG00005037721) prdx2 (ENSOTSG00005037722) ENSOTSG00005037725 ptger1a (ENSOTSG00005037726) ilf3a (ENSOTSG00005037729) Northern pike MODERN SPECIES 8 mxi1 (ENSELUG00000000969) dusp5 (ENSELUG00000022779) smc3 (ENSELUG00000022873) RBM20 (ENSELUG00000022906) pdcd4b (ENSELUG00000022960) bbip1 (ENSELUG00000030082) shoc2 (ENSELUG00000023017) adra2a (ENSELUG00000023041) rnaseh2a (ENSELUG00000023079) #16 MAST1 (ENSELUG00000023152) #17 atg4da (ENSELUG00000023164) #18 SMARCA4 (ENSELUG00000023232) #19 ENSELUG00000023242 #20 ENSELUG00000029870 ap1m2 (ENSELUG00000023282) #21 CDKN2D (ENSELUG00000023292) #22 ENSELUG00000023317 #23 keap1b (ENSELUG00000023382) #24 s1pr5b (ENSELUG00000023398) #25 fdx2 (ENSELUG00000023442) #26 ENSELUG00000023468 #27 ENSELUG00000023498 ##28 ENSELUG00000023503 #30 ENSELUG00000023533 #31 ENSELUG00000023550 hmox (ENSELUG00000023580) #32 rnf11a (ENSELUG00000032594) #33 NFIX (ENSELUG00000023645) #34 ENSELUG00000023674 dand5 (ENSELUG00000023679) #35 ENSELUG00000029302 ##36 Otomorpha ANCESTRAL SPECIES 4 ENSGT00940000153510.a ENSGT00940000161425 ENSGT00390000010231 ENSGT00940000156057.s.a ENSGT00940000156448.a.a ENSGT00940000160049 ENSGT00390000016730 ENSGT00940000162556.E.a ENSGT00730000111088.a ENSGT00440000038745.b ENSGT00390000002393 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b #20 ENSGT00940000177737 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.b ##28 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT01030000234881 ENSGT00390000017673.b.k #32 ENSGT00390000006009.b ENSGT00940000156865.a ENSGT00710000107036.a.b ENSGT00930000151058 Clupeiformes ANCESTRAL SPECIES 52 ENSGT00390000007786.a.a ENSGT00940000153510.a ENSGT00940000161425 ENSGT00390000010231 ENSGT00940000156057.s.a ENSGT00940000156448.a.a ENSGT00940000160049 ENSGT00390000016730 ENSGT00730000111088.a ENSGT00440000038745.b ENSGT00390000002393 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b #20 ENSGT00940000177737 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143.h #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.b ##28 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT01030000234881 ENSGT00390000017673.b.k #32 ENSGT00390000006009.b ENSGT00940000156865.a ENSGT00710000107036.a.b ENSGT00930000151058 Denticle herring MODERN SPECIES 13 RHBDF2 (ENSDCDG00000032294) AANAT (ENSDCDG00000032285) UBE2O (ENSDCDG00000032187) SPHK1 (ENSDCDG00000032173) cygb2 (ENSDCDG00000032167) PRPSAP1 (ENSDCDG00000032148) ENSDCDG00000032147 ddx17 (ENSDCDG00000031724) NTAN1 (ENSDCDG00000031697) ENSDCDG00000031688 bmerb1 (ENSDCDG00000031691) ENSDCDG00000031685 MARF1 (ENSDCDG00000031640) ENSDCDG00000031330 #20 ap1m2 (ENSDCDG00000031255) #21 CDKN2D (ENSDCDG00000031251) #22 ENSDCDG00000031249 #23 keap1b (ENSDCDG00000031248) #24 fdx2 (ENSDCDG00000031244) #26 ENSDCDG00000031243 ENSDCDG00000031239 #30 ENSDCDG00000031238 #31 ENSDCDG00000031235 ENSDCDG00000031233 HMOX1 (ENSDCDG00000031230) #32 ENSDCDG00000031228 ENSDCDG00000031224 ENSDCDG00000031222 ENSDCDG00000031221 pde6ha (ENSDCDG00000031220) pde6ha (ENSDCDG00000031217) Atlantic herring MODERN SPECIES 18 ddx17 (ENSCHAG00000006115) ENSCHAG00000009990 ENSCHAG00000010135 ENSCHAG00000010153 ENSCHAG00000010171 ENSCHAG00000010180 ENSCHAG00000010208 ENSCHAG00000010226 MPV17L (ENSCHAG00000010298) bmerb1 (ENSCHAG00000010319) MARF1 (ENSCHAG00000010402) SMARCA4 (ENSCHAG00000011670) #19 ENSCHAG00000022687 #20 ENSCHAG00000025154 ap1m2 (ENSCHAG00000025169) #21 CDKN2D (ENSCHAG00000025438) #22 ENSCHAG00000025442 #23 keap1b (ENSCHAG00000025443) #24 s1pr5b (ENSCHAG00000025449) #25 fdx2 (ENSCHAG00000025451) #26 ENSCHAG00000025452 #27 foxd7 (ENSCHAG00000025453) ##28 ENSCHAG00000025457 #30 ENSCHAG00000025461 ##31 ENSCHAG00000025462 ENSCHAG00000025464 HMOX1 (ENSCHAG00000025466) #32 ENSCHAG00000025474 ENSCHAG00000025482 ENSCHAG00000025506 ENSCHAG00000025511 Otophysi ANCESTRAL SPECIES 8 ENSGT00940000153510.a ENSGT00940000161425 ENSGT00390000010231 ENSGT00940000156057.s.a ENSGT00940000156448.a.a ENSGT00940000160049 ENSGT00390000016730 ENSGT00940000162556.E.a ENSGT00730000111088.a ENSGT00440000038745.b ENSGT00390000002393 ENSGT01100000263495.A.a.b.b.a.a.b.a ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT01030000234881.c ENSGT00390000017673.b.k #32 ENSGT00390000006009.b ENSGT00940000156865.a ENSGT00710000107036.a.b ENSGT00930000151058 ENSGT00390000013260.A.b.b Cyprinoidei ANCESTRAL SPECIES 103 ENSGT00950000183003.a.a.b.c.a ENSGT00530000064137.a.b ENSGT00730000111088.a ENSGT00440000038745.b ENSGT00390000002393 ENSGT01100000263495.A.a.b.b.a.a.b.a ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b #20 ENSGT00940000159089.g #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT01030000234881.c ENSGT00390000017673.b.k #32 ENSGT00940000156865.a ENSGT00710000107036.a.b ENSGT00930000151058 ENSGT00390000013260.A.b.b ENSGT00940000157534.a.a Cyprininae ANCESTRAL SPECIES 355 ENSGT00530000064137.a.b.z ENSGT00730000111088.a ENSGT00440000038745.b ENSGT00390000002393 ENSGT01100000263495.A.a.b.b.a.a.b.a ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.a.b #20 ENSGT00940000159089.h #21 ENSGT00940000154819.a.b.c.b.a.a #20 ENSGT00940000159089.g #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143.e #26 ENSGT00470000042444 #27 ENSGT00940000166140 #30 ENSGT00940000165343.c.a.a.b #31 ENSGT00390000012436.h ENSGT01030000234881.c ENSGT00390000017673.b.k #32 ENSGT00940000156865.a.d ENSGT00940000173517 ENSGT00930000151058 ENSGT00390000013260.A.b.b.h.b ENSGT00940000157534.a.a Goldfish MODERN SPECIES 46 RTN4 (ENSCARG00000000505) mtif2 (ENSCARG00000000468) CCDC88A (ENSCARG00000000374) rps27a (ENSCARG00000000255) ENSCARG00000000231 ENSCARG00000000202 bcl11ab (ENSCARG00000000179) MBD5 (ENSCARG00000033452) ENSCARG00000033366 bmerb1 (ENSCARG00000033238) ENSCARG00000033227 ENSCARG00000033222 SMARCA4 (ENSCARG00000033077) #19 ENSCARG00000032756 #20 ENSCARG00000032712 #21 CDKN2D (ENSCARG00000032699) #22 ENSCARG00000032693 #23 s1pr5b (ENSCARG00000032686) #25 ENSCARG00000032675 fdx2 (ENSCARG00000032658) #26 ENSCARG00000032634 #31 ENSCARG00000032626 pde6ha (ENSCARG00000032617) rbfox2 (ENSCARG00000032604) atf4a (ENSCARG00000032592) ENSCARG00000032576 ENSCARG00000032563 ENSCARG00000032553 MGAT3 (ENSCARG00000032516) TAB1 (ENSCARG00000031618) ENSCARG00000031577 Cyprininae_a ANCESTRAL SPECIES 326 ENSGT00950000183003.a.a.b.c.a ENSGT00530000064137.a.b.y ENSGT00730000111088.a ENSGT00440000038745.b.j ENSGT00390000002393 ENSGT01100000263495.A.a.b.b.a.a.b.a ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.a.a #20 ENSGT00940000159089.g #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143.e #26 ENSGT00470000042444 #27 ENSGT00940000166140 #30 ENSGT00940000165343.c.a.b #31 ENSGT00940000165343.d ##31 ENSGT00390000012436.h ENSGT01030000234881.c ENSGT00390000017673.b.k #32 ENSGT00940000156865.a.d ENSGT00940000173517 ENSGT00930000151058 ENSGT00390000013260.A.b.b.h.b Golden-line barbel MODERN SPECIES 2027 ap1m2 (ENSSGRG00000007830) #21 CDKN2D (ENSSGRG00000007829) #22 ENSSGRG00000007828 #23 s1pr5b (ENSSGRG00000007826) #25 fdx2 (ENSSGRG00000007825) #26 Zebrafish MODERN SPECIES 21 ENSDARG00000112811 MARF1 (ENSDARG00000115222) bmerb1 (ENSDARG00000086706) ENSDARG00000059581 sowahcb (ENSDARG00000059582) crygm4 (ENSDARG00000008219) SMARCA4 (ENSDARG00000104339) #19 ENSDARG00000026759 #20 ap1m2 (ENSDARG00000096454) #21 CDKN2D (ENSDARG00000094176) #22 ENSDARG00000078283 #23 keap1b (ENSDARG00000074634) #24 s1pr5b (ENSDARG00000052192) #25 fdx2 (ENSDARG00000052190) #26 zglp1 (ENSDARG00000067669) #27 ENSDARG00000110178 #30 TAB1 (ENSDARG00000036613) MGAT3 (ENSDARG00000036619) ENSDARG00000006544 ENSDARG00000091124 atf4a (ENSDARG00000111939) rbfox2 (ENSDARG00000052182) pde6ha (ENSDARG00000102558) ENSDARG00000099309 ENSDARG00000103662 Characiphysae ANCESTRAL SPECIES 18 ENSGT00940000153510.a ENSGT00940000161425 ENSGT00390000010231 ENSGT00940000156057.s.a ENSGT00940000156448.a.a ENSGT00940000160049 ENSGT00390000016730 ENSGT00940000162556.E.a ENSGT00730000111088.a ENSGT00440000038745.b ENSGT00390000002393 ENSGT01100000263495.A.a.b.b.a.a.b.a ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT01030000234881.c ENSGT00390000017673.b.k #32 ENSGT00390000006009.b ENSGT00940000156865.a ENSGT00710000107036.a.b ENSGT00930000151058 ENSGT00390000013260.A.b.b Characiphysae_b ANCESTRAL SPECIES 46 ENSGT00940000153510.a ENSGT00940000161425 ENSGT00390000010231 ENSGT00940000156057.s.a ENSGT00940000156448.a.a ENSGT00940000160049 ENSGT00390000016730 ENSGT00940000162556.E.a ENSGT00730000111088.a ENSGT00440000038745.b ENSGT00390000002393 ENSGT01100000263495.A.a.b.b.a.a.b.a ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT01030000234881.c ENSGT00390000017673.b.k #32 ENSGT00390000006009.b ENSGT00940000156865.a ENSGT00710000107036.a.b ENSGT00930000151058 ENSGT00390000013260.A.b.b Characoidei ANCESTRAL SPECIES 23 ENSGT00940000153510.a ENSGT00940000161425 ENSGT00390000010231 ENSGT00940000156057.s.a ENSGT00940000156448.a.a ENSGT00940000160049 ENSGT00390000016730 ENSGT00940000162556.E.a ENSGT00730000111088.a ENSGT00440000038745.b ENSGT00390000002393 ENSGT01100000263495.A.a.b.b.a.a.b.a ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT00390000017673.b.k #32 ENSGT00940000156865.a ENSGT00710000107036.a.b ENSGT00930000151058 ENSGT00390000013260.A.b.b ENSGT00940000157534.a.a ENSGT00530000063801.a.a Red-bellied piranha MODERN SPECIES 25 ppp1r12c (ENSPNAG00000029893) si:dkey-43k4.3 (ENSPNAG00000029900) ENSPNAG00000029907 gga1 (ENSPNAG00000029929) ddx17 (ENSPNAG00000029948) ENSPNAG00000029960 ENSPNAG00000029964 ENSPNAG00000006584 MPV17L (ENSPNAG00000029981) bmerb1 (ENSPNAG00000029988) MARF1 (ENSPNAG00000030013) ENSPNAG00000030023 SMARCA4 (ENSPNAG00000006636) #19 ENSPNAG00000030044 #20 ap1m2 (ENSPNAG00000030049) #21 CDKN2D (ENSPNAG00000030052) #22 ENSPNAG00000030054 #23 keap1b (ENSPNAG00000000163) #24 s1pr5b (ENSPNAG00000000164) #25 fdx2 (ENSPNAG00000007403) #26 zglp1 (ENSPNAG00000007404) #27 ENSPNAG00000007405 #30 ENSPNAG00000000165 #31 ENSPNAG00000007406 HMOX1 (ENSPNAG00000007407) #32 ENSPNAG00000007409 ENSPNAG00000007410 ENSPNAG00000000166 pde6ha (ENSPNAG00000000167) rbfox2 (ENSPNAG00000000168) atf4a (ENSPNAG00000000169) Mexicana tetra MODERN SPECIES 4 SYNGR1 (ENSAMXG00000017443) TAB1 (ENSAMXG00000017426) MGAT3 (ENSAMXG00000017396) ENSAMXG00000036369 ENSAMXG00000017360 ENSAMXG00000033037 ENSAMXG00000040955 ENSAMXG00000036694 MPV17L (ENSAMXG00000011191) bmerb1 (ENSAMXG00000011201) MARF1 (ENSAMXG00000011210) ENSAMXG00000033110 SMARCA4 (ENSAMXG00000011238) #19 ENSAMXG00000011312 #20 ap1m2 (ENSAMXG00000031560) #21 ENSAMXG00000033328 #22 ENSAMXG00000011356 #23 keap1b (ENSAMXG00000011366) #24 s1pr5b (ENSAMXG00000025439) #25 fdx2 (ENSAMXG00000038026) #26 ENSAMXG00000034709 ENSAMXG00000038618 #30 ENSAMXG00000040688 #31 ENSAMXG00000011410 ENSAMXG00000011421 #32 ENSAMXG00000043172 ENSAMXG00000031471 ENSAMXG00000040535 ENSAMXG00000011444 pde6ha (ENSAMXG00000011446) rbfox2 (ENSAMXG00000011451) Electric eel MODERN SPECIES 10 dtd1 (ENSEEEG00000006133) sec23b (ENSEEEG00000005964) ccdc85al (ENSEEEG00000005955) bcl11ab (ENSEEEG00000005952) ENSEEEG00000005951 ENSEEEG00000005948 ENSEEEG00000005942 mtif2 (ENSEEEG00000005929) ENSEEEG00000005925 bmerb1 (ENSEEEG00000005923) MARF1 (ENSEEEG00000005915) ENSEEEG00000005913 SMARCA4 (ENSEEEG00000005806) #19 ENSEEEG00000005428 #20 ap1m2 (ENSEEEG00000004883) #21 CDKN2D (ENSEEEG00000004881) #22 ENSEEEG00000004879 #23 keap1b (ENSEEEG00000004878) #24 s1pr5b (ENSEEEG00000004877) #25 fdx2 (ENSEEEG00000004875) #26 zglp1 (ENSEEEG00000004874) #27 ENSEEEG00000004872 ##28 ENSEEEG00000004871 #30 ENSEEEG00000004870 #31 ENSEEEG00000004868 ENSEEEG00000004867 HMOX1 (ENSEEEG00000004866) #32 ENSEEEG00000004865 ENSEEEG00000004864 ENSEEEG00000004863 ENSEEEG00000004861 Channel catfish MODERN SPECIES 3 ENSIPUG00000015593 ENSIPUG00000015598 c12h22orf23 (ENSIPUG00000015607) micall1 (ENSIPUG00000015621) gga1 (ENSIPUG00000015656) ddx17 (ENSIPUG00000015768) ntan1 (ENSIPUG00000015993) zgc:158417 (ENSIPUG00000016110) mp17l (ENSIPUG00000016127) bmerb1 (ENSIPUG00000016202) kiaa0430 (ENSIPUG00000016273) ENSIPUG00000016328 SMARCA4 (ENSIPUG00000016346) #19 ENSIPUG00000016428 #20 AP1M2 (ENSIPUG00000016495) #21 cdkn2d (ENSIPUG00000016566) #22 ENSIPUG00000016571 #23 keap1 (ENSIPUG00000016583) #24 S1pr1 (ENSIPUG00000016611) #25 fdx1l (ENSIPUG00000016629) #26 zglp1 (ENSIPUG00000016640) #27 ENSIPUG00000016647 ##28 ENSIPUG00000016654 #30 ENSIPUG00000016660 #31 ENSIPUG00000016677 ENSIPUG00000016698 ENSIPUG00000016708 #32 hmox (ENSIPUG00000016729) #32 ENSIPUG00000016750 #32 ENSIPUG00000016778 ENSIPUG00000016849