Ovalentaria ANCESTRAL SPECIES ENSGT00530000063960.g.a #8 ENSGT00940000160809 #9 ENSGT00390000017504 #10 ENSGT00950000183213.a.a.a #11 ENSGT00390000017489.b #12 ENSGT00940000157340.k.a #13 ENSGT00650000094757 ENSGT01030000234586.A.b.a #14 ENSGT00940000158046.a.b #15 ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 Atherinomorphae ANCESTRAL SPECIES 20 ENSGT00530000063960.g.a #8 ENSGT00940000160809 #9 ENSGT00390000017504 #10 ENSGT00950000183213.a.a.a #11 ENSGT00390000017489.b #12 ENSGT00940000157340.k.a #13 ENSGT00650000094757 ENSGT01030000234586.A.b.a #14 ENSGT00940000158046.a.b #15 ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 Cyprinodontiformes ANCESTRAL SPECIES 18 ENSGT00530000063960.g.a #8 ENSGT00940000160809 #9 ENSGT00390000017504 #10 ENSGT00950000183213.a.a.a #11 ENSGT00390000017489.b #12 ENSGT00940000157340.k.a #13 ENSGT00650000094757 ENSGT01030000234586.A.b.a #14 ENSGT00940000158046.a.b #15 ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 Cyprinodontoidei ANCESTRAL SPECIES 15 ENSGT00530000063960.g.a #8 ENSGT00940000160809 #9 ENSGT00390000017504 #10 ENSGT00950000183213.a.a.a #11 ENSGT00390000017489.b #12 ENSGT00940000157340.k.a #13 ENSGT00650000094757 ENSGT01030000234586.A.b.a #14 ENSGT00940000158046.a.b #15 ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 Poeciliinae ANCESTRAL SPECIES 9 ENSGT00530000063960.g.a #8 ENSGT00940000160809 #9 ENSGT00390000017504 #10 ENSGT00950000183213.a.a.a #11 ENSGT00390000017489.b #12 ENSGT00940000157340.k.a #13 ENSGT00650000094757 ENSGT01030000234586.A.b.a #14 ENSGT00940000158046.a.b #15 ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 Poecilia ANCESTRAL SPECIES 6 ENSGT00530000063960.g.a #8 ENSGT00940000160809 #9 ENSGT00390000017504 #10 ENSGT00950000183213.a.a.a #11 ENSGT00390000017489.b #12 ENSGT00940000157340.k.a #13 ENSGT00650000094757 ENSGT01030000234586.A.b.a #14 ENSGT00940000158046.a.b #15 ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00940000165343.d ##31 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 Guppy DUPLICATION Guppy MODERN SPECIES 439 tefm (ENSPREG00000015588) #7 serhl (ENSPREG00000015573) #8 mb (ENSPREG00000015563) #9 ENSPREG00000015549 #10 zgc:158803 (ENSPREG00000015528) #11 smdt1b (ENSPREG00000015520) #12 ENSPREG00000015510 #13 ENSPREG00000015145 #14 ENSPREG00000015036 #15 rnaseh2a (ENSPREG00000015015) #16 MAST1 (ENSPREG00000014975) #17 atg4da (ENSPREG00000014939) #18 SMARCA4 (ENSPREG00000014823) #19 ENSPREG00000014073 #20 ap1m2 (ENSPREG00000013898) #21 CDKN2D (ENSPREG00000013882) #22 ENSPREG00000013872 #23 keap1b (ENSPREG00000013858) #24 s1pr5b (ENSPREG00000013844) #25 fdx2 (ENSPREG00000013790) #26 ENSPREG00000013782 #27 ENSPREG00000013775 #28 ENSPREG00000013771 #29 ENSPREG00000013765 #30 ENSPREG00000013750 #31 HMOX1 (ENSPREG00000013545) #32 rnf11a (ENSPREG00000013482) #33 NFIX (ENSPREG00000013386) #34 dand5 (ENSPREG00000013337) #35 tspan34 (ENSPREG00000013321) #36 RAB3D (ENSPREG00000013308) #37 Guppy DUPLICATION Guppy MODERN SPECIES 456 ENSPREG00000020075 ENSPREG00000020055 ARHGAP39 (ENSPREG00000020019) ENSPREG00000019993 rad54l (ENSPREG00000019955) ENSPREG00000019898 EPS15L1 (ENSPREG00000019656) ENSPREG00000019559 ENSPREG00000019547 SZT2 (ENSPREG00000019474) hyi (ENSPREG00000019414) ENSPREG00000019400 ENSPREG00000019384 ENSPREG00000019377 ENSPREG00000019359 ENSPREG00000019157 ##22 bend5 (ENSPREG00000019102) AGBL4 (ENSPREG00000019035) elavl4 (ENSPREG00000018937) dmrta2 (ENSPREG00000018881) faf1 (ENSPREG00000018831) ENSPREG00000018593 ##22 rnf11b (ENSPREG00000018536) TTC39A (ENSPREG00000018452) EPS15 (ENSPREG00000018381) calr (ENSPREG00000018357) tor3a (ENSPREG00000018330) osbpl9 (ENSPREG00000018181) abl2 (ENSPREG00000018109) soat1 (ENSPREG00000018080) CACNA1E (ENSPREG00000017980) Guppy MODERN SPECIES 456 EPS15L1 (ENSPREG00000019656) ENSPREG00000019559 ENSPREG00000019547 SZT2 (ENSPREG00000019474) hyi (ENSPREG00000019414) ENSPREG00000019400 ENSPREG00000019384 ENSPREG00000019377 ENSPREG00000019359 ENSPREG00000019157 ##22 bend5 (ENSPREG00000019102) AGBL4 (ENSPREG00000019035) elavl4 (ENSPREG00000018937) dmrta2 (ENSPREG00000018881) faf1 (ENSPREG00000018831) ENSPREG00000018593 ##22 rnf11b (ENSPREG00000018536) TTC39A (ENSPREG00000018452) EPS15 (ENSPREG00000018381) calr (ENSPREG00000018357) tor3a (ENSPREG00000018330) osbpl9 (ENSPREG00000018181) abl2 (ENSPREG00000018109) soat1 (ENSPREG00000018080) CACNA1E (ENSPREG00000017980) qsox1 (ENSPREG00000017924) lhx4 (ENSPREG00000017901) acbd6 (ENSPREG00000017881) ENSPREG00000017843 sin3b (ENSPREG00000017772) haus5 (ENSPREG00000017687) NAME_6 ANCESTRAL SPECIES 47 ENSGT00530000063960.g.a #8 ENSGT00940000160809 #9 ENSGT00390000017504 #10 ENSGT00950000183213.a.a.a #11 ENSGT00390000017489.b #12 ENSGT00940000157340.k.a #13 ENSGT00650000094757 ENSGT01030000234586.A.b.a #14 ENSGT00940000158046.a.b #15 ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00940000165343.d ##31 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 Amazon molly DUPLICATION Amazon molly MODERN SPECIES 303 ENSPFOG00000004270 tax1bp3 (ENSPFOG00000004292) slc1a6 (ENSPFOG00000004310) ENSPFOG00000004463 pole4 (ENSPFOG00000004484) ENSPFOG00000004525 ccl25b (ENSPFOG00000004562) gclm (ENSPFOG00000004600) dnttip2 (ENSPFOG00000004653) spata6 (ENSPFOG00000023137) AGBL4 (ENSPFOG00000004717) bend5 (ENSPFOG00000004753) elavl4 (ENSPFOG00000004811) dmrta2 (ENSPFOG00000004939) faf1 (ENSPFOG00000004981) ENSPFOG00000005246 #22 rnf11b (ENSPFOG00000005255) TTC39A (ENSPFOG00000005356) EPS15 (ENSPFOG00000005835) calr (ENSPFOG00000005960) tor3a (ENSPFOG00000006170) osbpl9 (ENSPFOG00000006260) abl2 (ENSPFOG00000006669) soat1 (ENSPFOG00000006972) ENSPFOG00000007239 CACNA1E (ENSPFOG00000007877) CEP350 (ENSPFOG00000008359) qsox1 (ENSPFOG00000008535) lhx4 (ENSPFOG00000008745) lhx4 (ENSPFOG00000008766) acbd6 (ENSPFOG00000008788) Amazon molly MODERN SPECIES 295 serhl (ENSPFOG00000012304) #8 mb (ENSPFOG00000012371) #9 ENSPFOG00000012395 #10 zgc:158803 (ENSPFOG00000012437) #11 smdt1b (ENSPFOG00000012495) #12 ENSPFOG00000012509 #13 ENSPFOG00000021920 ENSPFOG00000012599 #14 ENSPFOG00000012609 #15 rnaseh2a (ENSPFOG00000012627) #16 MAST1 (ENSPFOG00000012690) #17 atg4da (ENSPFOG00000012852) #18 SMARCA4 (ENSPFOG00000012930) #19 ENSPFOG00000013091 #20 ap1m2 (ENSPFOG00000023907) #21 CDKN2D (ENSPFOG00000013301) #22 ENSPFOG00000013303 #23 keap1b (ENSPFOG00000013318) #24 s1pr5b (ENSPFOG00000020141) #25 fdx2 (ENSPFOG00000013381) #26 ENSPFOG00000023655 #28 ENSPFOG00000013392 #29 ENSPFOG00000013394 #30 ENSPFOG00000013403 #31 ENSPFOG00000022531 ##31 HMOX1 (ENSPFOG00000013418) #32 rnf11a (ENSPFOG00000013436) #33 NFIX (ENSPFOG00000013453) #34 dand5 (ENSPFOG00000013550) #35 tspan34 (ENSPFOG00000013561) #36 RAB3D (ENSPFOG00000013657) #37 Sailfin molly DUPLICATION Sailfin molly MODERN SPECIES 438 dmrta2 (ENSPLAG00000005407) faf1 (ENSPLAG00000005394) ENSPLAG00000005359 #22 rnf11b (ENSPLAG00000005349) TTC39A (ENSPLAG00000005323) ENSPLAG00000005144 calr (ENSPLAG00000005102) tor3a (ENSPLAG00000005070) osbpl9 (ENSPLAG00000005021) abl2 (ENSPLAG00000004898) soat1 (ENSPLAG00000004885) Sailfin molly MODERN SPECIES 4 rnaseh2a (ENSPLAG00000018723) #16 MAST1 (ENSPLAG00000018711) #17 atg4da (ENSPLAG00000018657) #18 SMARCA4 (ENSPLAG00000018616) #19 ENSPLAG00000018526 #20 ap1m2 (ENSPLAG00000018476) #21 CDKN2D (ENSPLAG00000018442) #22 ENSPLAG00000018432 #23 keap1b (ENSPLAG00000018426) #24 s1pr5b (ENSPLAG00000018413) #25 fdx2 (ENSPLAG00000018407) #26 ENSPLAG00000018403 #27 ENSPLAG00000018396 #28 ENSPLAG00000018392 #29 ENSPLAG00000018384 #30 ENSPLAG00000018376 #31 HMOX1 (ENSPLAG00000018364) #32 rnf11a (ENSPLAG00000018356) #33 NFIX (ENSPLAG00000018337) #34 dand5 (ENSPLAG00000018314) #35 tspan34 (ENSPLAG00000018292) #36 RAB3D (ENSPLAG00000018052) #37 Platyfish MODERN SPECIES 19 serhl (ENSXMAG00000006867) #8 mb (ENSXMAG00000025476) #9 ENSXMAG00000006894 #10 zgc:158803 (ENSXMAG00000006903) #11 ENSXMAG00000022941 #12 ENSXMAG00000006923 #13 ENSXMAG00000006940 #14 ENSXMAG00000021473 #15 rnaseh2a (ENSXMAG00000006953) #16 ENSXMAG00000027436 MAST1 (ENSXMAG00000006970) #17 atg4da (ENSXMAG00000007016) #18 SMARCA4 (ENSXMAG00000007030) #19 ENSXMAG00000007105 #20 ap1m2 (ENSXMAG00000007151) #21 CDKN2D (ENSXMAG00000022409) #22 ENSXMAG00000007179 #23 keap1b (ENSXMAG00000021448) #24 s1pr5b (ENSXMAG00000019815) #25 fdx2 (ENSXMAG00000005511) #26 ENSXMAG00000020994 #27 ENSXMAG00000019816 #28 ENSXMAG00000026103 #29 ENSXMAG00000027376 #30 ENSXMAG00000025089 #31 ENSXMAG00000025662 HMOX1 (ENSXMAG00000007220) #32 rnf11a (ENSXMAG00000022184) #33 NFIX (ENSXMAG00000007238) #34 dand5 (ENSXMAG00000017343) #35 tspan34 (ENSXMAG00000024059) #36 NAME_4 ANCESTRAL SPECIES 73 ENSGT00390000010581 #7 ENSGT00530000063960.g.a #8 ENSGT00940000160809 #9 ENSGT00390000017504 #10 ENSGT00950000183213.a.a.a #11 ENSGT00390000017489.b #12 ENSGT00940000157340.k.a #13 ENSGT01030000234586.A.b.a #14 ENSGT00940000158046.a.b #15 ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00940000165343.d ##31 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a.d #36 Sheepshead minnow MODERN SPECIES 1076 AP1M2 (ENSCVAG00000019645) #21 CDKN2D (ENSCVAG00000019607) #22 ENSCVAG00000019605 #23 keap1b (ENSCVAG00000019600) #24 s1pr5b (ENSCVAG00000019571) #25 ENSCVAG00000019565 klf4 (ENSCVAG00000019555) SNCA (ENSCVAG00000019542) ENSCVAG00000019418 nop14 (ENSCVAG00000019406) add1 (ENSCVAG00000019337) Mummichog MODERN SPECIES 399 serhl (ENSFHEG00000007585) #8 mb (ENSFHEG00000007598) #9 ENSFHEG00000007618 #10 zgc:158803 (ENSFHEG00000007623) #11 smdt1b (ENSFHEG00000007632) #12 ENSFHEG00000007638 #13 KCNJ4 (ENSFHEG00000007650) #14 SOX10 (ENSFHEG00000007675) #15 rnaseh2a (ENSFHEG00000007682) #16 MAST1 (ENSFHEG00000007742) #17 atg4da (ENSFHEG00000007752) #18 SMARCA4 (ENSFHEG00000007902) #19 ENSFHEG00000007919 ENSFHEG00000007933 #20 ap1m2 (ENSFHEG00000007972) #21 CDKN2D (ENSFHEG00000007983) #22 ENSFHEG00000007992 #23 keap1b (ENSFHEG00000007996) #24 s1pr5b (ENSFHEG00000008004) #25 ENSFHEG00000008010 fdx2 (ENSFHEG00000008018) #26 ENSFHEG00000008045 #27 ENSFHEG00000008060 #28 Aplocheiloidei ANCESTRAL SPECIES 32 ENSGT00940000153469.a.a.l ENSGT00530000063960.g.a #8 ENSGT00940000160809 #9 ENSGT00390000017504 #10 ENSGT00950000183213.a.a.a #11 ENSGT00390000017489.b #12 ENSGT00940000157340.k.a #13 ENSGT01030000234586.A.b.a #14 ENSGT00940000158046.a.b #15 ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 ENSGT00940000157552.s.a #37 Mangrove rivulus MODERN SPECIES 138 ENSKMAG00000020046 mb (ENSKMAG00000020029) #9 ENSKMAG00000020017 #10 zgc:158803 (ENSKMAG00000019994) #11 ENSKMAG00000019985 #12 ENSKMAG00000019930 ENSKMAG00000019899 #13 KCNJ4 (ENSKMAG00000019890) #14 SOX10 (ENSKMAG00000019870) #15 rnaseh2a (ENSKMAG00000019829) #16 MAST1 (ENSKMAG00000019681) #17 atg4da (ENSKMAG00000019629) #18 SMARCA4 (ENSKMAG00000019518) #19 ENSKMAG00000019458 #20 ap1m2 (ENSKMAG00000019421) #21 CDKN2D (ENSKMAG00000019404) #22 ENSKMAG00000019395 #23 keap1b (ENSKMAG00000019360) #24 s1pr5b (ENSKMAG00000019347) #25 fdx2 (ENSKMAG00000019336) #26 ENSKMAG00000019325 #27 ENSKMAG00000019315 #28 ENSKMAG00000019305 #29 ENSKMAG00000019283 #30 ENSKMAG00000019262 #31 ENSKMAG00000019249 #32 rnf11a (ENSKMAG00000019233) #33 NFIX (ENSKMAG00000019092) #34 dand5 (ENSKMAG00000019010) #35 tspan34 (ENSKMAG00000018993) #36 ENSKMAG00000018973 #37 Turquoise killifish MODERN SPECIES 1617 MB (ENSNFUG00015018903) #9 ENSNFUG00015018909 PANE1 (ENSNFUG00015018910) #10 zgc:158803 (ENSNFUG00015018917) #11 C3H22ORF32 (ENSNFUG00015018926) #12 ENSNFUG00015018928 #13 ENSNFUG00015018933 ENSNFUG00015018937 #14 SOX10 (ENSNFUG00015018941) #15 RNASEH2A (ENSNFUG00015018947) #16 MAST1 (ENSNFUG00015019007) #17 atg4da (ENSNFUG00015020523) #18 SMARCA4 (ENSNFUG00015020530) #19 ENSNFUG00015020613 #20 ap1m2 (ENSNFUG00015022583) #21 Cdkn2d (ENSNFUG00015022781) #22 ENSNFUG00015022782 #23 LRRC8E (ENSNFUG00015022783) DDX5 (ENSNFUG00015022815) Nfu_g_1_013649 (ENSNFUG00015023104) ENSNFUG00015023110 TTBK1 (ENSNFUG00015023144) TPC3 (ENSNFUG00015023162) TMEM246 (ENSNFUG00015023205) LGALSLA (ENSNFUG00015023207) slc29a2 (ENSNFUG00015023212) PELI1A (ENSNFUG00015023219) vps54 (ENSNFUG00015023231) ugp2a (ENSNFUG00015023325) MDH1 (ENSNFUG00015023534) otx2a (ENSNFUG00015023572) Oryzias ANCESTRAL SPECIES 15 ENSGT01030000234820 ENSGT00530000063960.g.a #8 ENSGT00940000160809 #9 ENSGT00390000017504 #10 ENSGT00950000183213.a.a.a #11 ENSGT00390000017489.b #12 ENSGT00940000157340.k.a #13 ENSGT01030000234586.A.b.a #14 ENSGT00940000158046.a.b #15 ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 ENSGT00940000157552.s.a #37 Oryzias_a ANCESTRAL SPECIES 23 ENSGT01030000234820 ENSGT00530000063960.g.a #8 ENSGT00940000160809 #9 ENSGT00390000017504 #10 ENSGT00940000165833 ENSGT00390000017489.b #12 ENSGT00940000157340.k.a #13 ENSGT01030000234586.A.b.a #14 ENSGT00940000158046.a.b #15 ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000012436.h ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 ENSGT00940000157552.s.a #37 Japanese Medaka HdrR MODERN SPECIES ENSORLG00000028999 serhl (ENSORLG00000004149) #8 mb (ENSORLG00000026103) #9 pane1 (ENSORLG00000004119) #10 ENSORLG00000004110 smdt1b (ENSORLG00000004088) #12 ENSORLG00000004082 #13 ENSORLG00000004067 #14 ENSORLG00000024031 #15 rnaseh2a (ENSORLG00000004042) #16 ENSORLG00000022445 #17 atg4da (ENSORLG00000004021) #18 ENSORLG00000003955 #19 ENSORLG00000003886 #20 ap1m2 (ENSORLG00000003846) #21 CDKN2D (ENSORLG00000003842) #22 ENSORLG00000003831 #23 ENSORLG00000027541 #23 keap1b (ENSORLG00000003823) #24 s1pr5b (ENSORLG00000003793) #25 fdx2 (ENSORLG00000029397) #26 ENSORLG00000024901 #27 ENSORLG00000003779 #28 ENSORLG00000003776 #30 ENSORLG00000003769 #31 ENSORLG00000028289 ENSORLG00000003753 #32 rnf11a (ENSORLG00000022986) #33 NFIX (ENSORLG00000003734) #34 dand5 (ENSORLG00000003690) #35 tspan34 (ENSORLG00000003680) #36 Chinese medaka MODERN SPECIES 272 ENSOSIG00000021706 serhl (ENSOSIG00000021711) #8 mb (ENSOSIG00000021717) #9 pane1 (ENSOSIG00000021730) #10 ENSOSIG00000021748 ENSOSIG00000021753 ENSOSIG00000021756 #13 ENSOSIG00000021766 #14 SOX10 (ENSOSIG00000021784) #15 rnaseh2a (ENSOSIG00000021790) #16 MAST1 (ENSOSIG00000021971) #17 atg4da (ENSOSIG00000022514) #18 SMARCA4 (ENSOSIG00000022566) #19 ENSOSIG00000022637 #20 AP1M2 (ENSOSIG00000022846) #21 CDKN2D (ENSOSIG00000022850) #22 ENSOSIG00000022851 ENSOSIG00000022853 keap1b (ENSOSIG00000022855) #24 s1pr5b (ENSOSIG00000022856) #25 fdx2 (ENSOSIG00000022858) #26 ENSOSIG00000022860 #27 ENSOSIG00000022863 #28 ENSOSIG00000022867 #30 ENSOSIG00000022869 #31 ENSOSIG00000022870 ##31 ENSOSIG00000000088 HMOX1 (ENSOSIG00000000100) #32 rnf11a (ENSOSIG00000000109) #33 NFIX (ENSOSIG00000000182) #34 dand5 (ENSOSIG00000000234) #35 Oryzias_b ANCESTRAL SPECIES 29 ENSGT01030000234820 ENSGT00530000063960.g.a #8 ENSGT00940000160809 #9 ENSGT00390000017504 #10 ENSGT00950000183213.a.a.a #11 ENSGT00390000017489.b #12 ENSGT00940000157340.k.a #13 ENSGT01030000234586.A.b.a #14 ENSGT00940000158046.a.b #15 ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 ENSGT00940000157552.s.a #37 ENSGT00390000004368 Javanese ricefish MODERN SPECIES septin3 (ENSOJAG00000018354) ENSOJAG00000018446 serhl (ENSOJAG00000018454) #8 mb (ENSOJAG00000018470) #9 ENSOJAG00000018485 #10 zgc:158803 (ENSOJAG00000018496) #11 smdt1b (ENSOJAG00000018524) #12 ENSOJAG00000018533 #13 ENSOJAG00000018551 #14 SOX10 (ENSOJAG00000018558) #15 rnaseh2a (ENSOJAG00000018576) #16 MAST1 (ENSOJAG00000018779) #17 atg4da (ENSOJAG00000020110) #18 ENSOJAG00000020541 #20 ap1m2 (ENSOJAG00000021653) #21 CDKN2D (ENSOJAG00000021763) #22 ENSOJAG00000021769 #23 keap1b (ENSOJAG00000021777) #24 s1pr5b (ENSOJAG00000021789) #25 fdx2 (ENSOJAG00000021790) #26 ENSOJAG00000021795 #27 ENSOJAG00000021797 #28 ENSOJAG00000021805 #30 ENSOJAG00000021807 #31 HMOX1 (ENSOJAG00000021814) #32 rnf11a (ENSOJAG00000021842) #33 NFIX (ENSOJAG00000021867) #34 dand5 (ENSOJAG00000021902) #35 tspan34 (ENSOJAG00000021920) #36 RAB3D (ENSOJAG00000021948) #37 pld6 (ENSOJAG00000021963) Indian medaka MODERN SPECIES 21 ENSOMEG00000016237 serhl (ENSOMEG00000016261) #8 mb (ENSOMEG00000016290) #9 ENSOMEG00000016315 #10 zgc:158803 (ENSOMEG00000016350) #11 smdt1b (ENSOMEG00000016364) #12 ENSOMEG00000016389 #13 ENSOMEG00000016403 #14 SOX10 (ENSOMEG00000016415) #15 rnaseh2a (ENSOMEG00000016454) #16 MAST1 (ENSOMEG00000000412) #17 atg4da (ENSOMEG00000016515) #18 SMARCA4 (ENSOMEG00000016626) #19 ENSOMEG00000000419 #20 ap1m2 (ENSOMEG00000016714) #21 CDKN2D (ENSOMEG00000016735) #22 ENSOMEG00000016757 #23 fdx2 (ENSOMEG00000000776) #26 ENSOMEG00000016799 #27 ENSOMEG00000016816 #28 keap1b (ENSOMEG00000016855) #24 ENSOMEG00000016869 #30 ENSOMEG00000016899 #31 HMOX1 (ENSOMEG00000016914) #32 rnf11a (ENSOMEG00000016928) #33 NFIX (ENSOMEG00000017131) #34 dand5 (ENSOMEG00000017180) #35 tspan34 (ENSOMEG00000017196) #36 RAB3D (ENSOMEG00000017217) #37 pld6 (ENSOMEG00000017243) elof1 (ENSOMEG00000017257) Ovalentaria_B ANCESTRAL SPECIES 4 ENSGT00530000063960.g.b ##8 ENSGT00530000063960.g.a #8 ENSGT00940000160809 #9 ENSGT00390000017504 #10 ENSGT00950000183213.a.a.a #11 ENSGT00390000017489.b #12 ENSGT00940000157340.k.a #13 ENSGT01030000234586.A.b.a #14 ENSGT00940000158046.a.b #15 ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00940000181262 ENSGT00940000165343.d ##31 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 Pomacentridae ANCESTRAL SPECIES 8 ENSGT00530000063960.g.b ##8 ENSGT00530000063960.g.a #8 ENSGT00940000160809 #9 ENSGT00390000017504 #10 ENSGT00950000183213.a.a.a #11 ENSGT00390000017489.b #12 ENSGT00940000157340.k.a #13 ENSGT01030000234586.A.b.a #14 ENSGT00940000158046.a.b #15 ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00940000181262 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 Pomacentridae_A ANCESTRAL SPECIES ENSGT00530000063960.g.b ##8 ENSGT00530000063960.g.a #8 ENSGT00940000160809 #9 ENSGT00390000017504 #10 ENSGT00950000183213.a.a.a #11 ENSGT00390000017489.b #12 ENSGT00940000157340.k.a #13 ENSGT01030000234586.A.b.a #14 ENSGT00940000158046.a.b #15 ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00940000181262 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 Amphiprion ANCESTRAL SPECIES ENSGT00530000063960.g.a #8 ENSGT00940000160809 #9 ENSGT00390000017504 #10 ENSGT00950000183213.a.a.a #11 ENSGT00390000017489.b #12 ENSGT00940000157340.k.a #13 ENSGT01030000234586.A.b.a #14 ENSGT00940000158046.a.b #15 ENSGT00390000010768 #16 ENSGT01090000261423 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.d #20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00940000181262 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00950000182916.a.b.a.a.a.b.b.a ##34 ENSGT00530000063926.b #35 Orange clownfish MODERN SPECIES 17 mb (ENSAPEG00000022796) #9 ENSAPEG00000022807 #10 zgc:158803 (ENSAPEG00000022841) #11 smdt1b (ENSAPEG00000022857) #12 ENSAPEG00000022874 #13 ENSAPEG00000022889 #14 SOX10 (ENSAPEG00000022921) #15 rnaseh2a (ENSAPEG00000022937) #16 ENSAPEG00000022961 MAST1 (ENSAPEG00000022973) #17 ENSAPEG00000023018 atg4da (ENSAPEG00000023035) #18 SMARCA4 (ENSAPEG00000023108) #19 ENSAPEG00000023188 #20 ap1m2 (ENSAPEG00000023204) #21 CDKN2D (ENSAPEG00000023215) #22 ENSAPEG00000023218 #23 keap1b (ENSAPEG00000023223) #24 s1pr5b (ENSAPEG00000023229) #25 fdx2 (ENSAPEG00000023232) #26 ENSAPEG00000023241 #27 ENSAPEG00000023251 #28 NEU3 (ENSAPEG00000023257) #29 ENSAPEG00000023267 #30 ENSAPEG00000023300 #31 ENSAPEG00000023313 HMOX1 (ENSAPEG00000023325) #32 rnf11a (ENSAPEG00000023334) #33 NFIX (ENSAPEG00000023351) #34 dand5 (ENSAPEG00000023394) #35 tspan34 (ENSAPEG00000023403) #36 Clown anemonefish MODERN SPECIES 1044 mb (ENSAOCG00000008982) #9 pane1 (ENSAOCG00000009012) #10 zgc:158803 (ENSAOCG00000009085) #11 smdt1b (ENSAOCG00000009097) #12 ENSAOCG00000009111 #13 ENSAOCG00000009131 #14 SOX10 (ENSAOCG00000009184) #15 rnaseh2a (ENSAOCG00000009217) #16 ENSAOCG00000009239 ENSAOCG00000009261 MAST1 (ENSAOCG00000009348) #17 atg4da (ENSAOCG00000009366) #18 SMARCA4 (ENSAOCG00000009450) #19 ENSAOCG00000009468 #20 ap1m2 (ENSAOCG00000009505) #21 CDKN2D (ENSAOCG00000009517) #22 ENSAOCG00000002137 #23 keap1b (ENSAOCG00000009527) #24 s1pr5b (ENSAOCG00000009535) #25 fdx2 (ENSAOCG00000009574) #26 ENSAOCG00000009617 #27 ENSAOCG00000009625 #28 Spiny chromis MODERN SPECIES 88 serhl (ENSAPOG00000000089) #8 mb (ENSAPOG00000003952) #9 pane1 (ENSAPOG00000003964) #10 zgc:158803 (ENSAPOG00000003970) #11 smdt1b (ENSAPOG00000003995) #12 ENSAPOG00000004017 #13 ENSAPOG00000004042 #14 SOX10 (ENSAPOG00000004067) #15 rnaseh2a (ENSAPOG00000004101) #16 MAST1 (ENSAPOG00000004190) #17 atg4da (ENSAPOG00000004347) #18 atg4da (ENSAPOG00000004393) #18 SMARCA4 (ENSAPOG00000004542) #19 ENSAPOG00000004583 #20 ap1m2 (ENSAPOG00000004630) #21 CDKN2D (ENSAPOG00000004642) #22 ENSAPOG00000000116 #23 keap1b (ENSAPOG00000004671) #24 s1pr5b (ENSAPOG00000004684) #25 fdx2 (ENSAPOG00000004692) #26 zglp1 (ENSAPOG00000004713) #27 ENSAPOG00000004728 #28 ENSAPOG00000004745 #29 ENSAPOG00000004766 #30 ENSAPOG00000004786 #31 HMOX1 (ENSAPOG00000004803) #32 rnf11a (ENSAPOG00000004817) #33 NFIX (ENSAPOG00000004937) #34 dand5 (ENSAPOG00000004996) #35 ENSAPOG00000005041 #36 Bicolor damselfish MODERN SPECIES 239 serhl (ENSSPAG00000013461) #8 mb (ENSSPAG00000013443) #9 ENSSPAG00000013408 #10 zgc:158803 (ENSSPAG00000013318) #11 ENSSPAG00000013302 #12 ENSSPAG00000013289 #13 ENSSPAG00000012865 #14 SOX10 (ENSSPAG00000012804) #15 rnaseh2a (ENSSPAG00000012769) #16 ENSSPAG00000012759 MAST1 (ENSSPAG00000012704) #17 atg4da (ENSSPAG00000012672) #18 SMARCA4 (ENSSPAG00000012533) #19 ENSSPAG00000012489 #20 ap1m2 (ENSSPAG00000012447) #21 CDKN2D (ENSSPAG00000012438) #22 ENSSPAG00000012424 #23 keap1b (ENSSPAG00000012410) #24 s1pr5b (ENSSPAG00000012405) #25 fdx2 (ENSSPAG00000012392) #26 zglp1 (ENSSPAG00000012373) #27 ENSSPAG00000012365 #28 ENSSPAG00000012355 ENSSPAG00000012346 NEU3 (ENSSPAG00000012338) #29 ENSSPAG00000012330 #30 ENSSPAG00000012292 #31 HMOX1 (ENSSPAG00000012255) #32 rnf11a (ENSSPAG00000012240) #33 NFIX (ENSSPAG00000012179) #34 dand5 (ENSSPAG00000012165) #35 Cichlidae ANCESTRAL SPECIES 3 ENSGT00530000063960.g.a #8 ENSGT00940000160809 #9 ENSGT00390000017504 #10 ENSGT00950000183213.a.a.a #11 ENSGT00390000017489.b #12 ENSGT00940000157340.k.a #13 ENSGT01030000234586.A.b.a #14 ENSGT00940000158046.a.b #15 ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.c.b ##20 ENSGT00940000154819.a.b.c.b.c.a ##20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 ENSGT00940000157552.s.a #37 Pseudocrenilabrinae ANCESTRAL SPECIES 3 ENSGT00530000063960.g.a #8 ENSGT00940000160809 #9 ENSGT00390000017504 #10 ENSGT00950000183213.a.a.a #11 ENSGT00390000017489.b #12 ENSGT00940000157340.k.a #13 ENSGT01030000234586.A.b.a #14 ENSGT00940000158046.a.b #15 ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.c.b ##20 ENSGT00940000154819.a.b.c.b.c.a.a ##20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d.f.a #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 ENSGT00940000157552.s.a #37 Pseudocrenilabrinae_A ANCESTRAL SPECIES 5 ENSGT00530000063960.g.a #8 ENSGT00940000160809 #9 ENSGT00390000017504 #10 ENSGT00950000183213.a.a.a #11 ENSGT00390000017489.b #12 ENSGT00940000157340.k.a #13 ENSGT01030000234586.A.b.a #14 ENSGT00940000158046.a.b #15 ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.c.b ##20 ENSGT00940000154819.a.b.c.b.c.a.a ##20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d.f.a #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 ENSGT00940000157552.s.a #37 Haplochromini ANCESTRAL SPECIES 3 ENSGT00530000063960.g.b ##8 ENSGT00530000063960.g.a #8 ENSGT00940000160809 #9 ENSGT00390000017504 #10 ENSGT00950000183213.a.a.a #11 ENSGT00390000017489.b #12 ENSGT00940000157340.k.a #13 ENSGT01030000234586.A.b.a #14 ENSGT00940000158046.a.b #15 ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.c.a.a ##20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d.f.a #29 ENSGT00950000182944.A.b.d.f.b #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 Burton s mouthbrooder MODERN SPECIES 734 ENSHBUG00000005167 #10 zgc:158803 (ENSHBUG00000005175) #11 smdt1b (ENSHBUG00000005194) #12 ENSHBUG00000005215 #13 KCNJ4 (ENSHBUG00000005222) #14 ENSHBUG00000005242 #15 rnaseh2a (ENSHBUG00000005267) #16 ENSHBUG00000005303 #17 MAST1 (ENSHBUG00000005318) #17 atg4da (ENSHBUG00000005336) #18 SMARCA4 (ENSHBUG00000005447) #19 ENSHBUG00000005468 ENSHBUG00000005484 ENSHBUG00000006790 ##20 ap1m2 (ENSHBUG00000006969) #21 CDKN2D (ENSHBUG00000006917) #22 ENSHBUG00000006982 #23 keap1b (ENSHBUG00000006989) #24 s1pr5b (ENSHBUG00000006993) #25 fdx2 (ENSHBUG00000007004) #26 ENSHBUG00000007015 #27 ENSHBUG00000007027 #28 ENSHBUG00000007502 #29 Haplochromini_A ANCESTRAL SPECIES 2 ENSGT00530000063960.g.b ##8 ENSGT00530000063960.g.a #8 ENSGT00940000160809 #9 ENSGT00390000017504 #10 ENSGT00950000183213.a.a.a #11 ENSGT00390000017489.b #12 ENSGT00940000157340.k.a #13 ENSGT01030000234586.A.b.a #14 ENSGT00940000158046.a.b #15 ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.c.a.a ##20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d.f.a #29 ENSGT00950000182944.A.b.d.f.b #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00530000063926.b #35 ENSGT00940000164506.b.a #36 P. nyererei MODERN SPECIES 643 mb (ENSPNYG00000023965) #9 ENSPNYG00000023967 #10 zgc:158803 (ENSPNYG00000023971) #11 smdt1b (ENSPNYG00000023975) #12 KCNJ4 (ENSPNYG00000023978) #14 ENSPNYG00000023985 #15 rnaseh2a (ENSPNYG00000023986) #16 ENSPNYG00000023987 ENSPNYG00000023988 #17 MAST1 (ENSPNYG00000023989) #17 atg4da (ENSPNYG00000023991) #18 SMARCA4 (ENSPNYG00000023995) #19 ENSPNYG00000024000 ##20 ENSPNYG00000024002 ##20 ap1m2 (ENSPNYG00000024003) #21 CDKN2D (ENSPNYG00000024004) #22 ENSPNYG00000024006 #23 keap1b (ENSPNYG00000024008) #24 s1pr5b (ENSPNYG00000024012) #25 fdx2 (ENSPNYG00000024013) #26 zglp1 (ENSPNYG00000024014) #27 ENSPNYG00000024016 #29 ENSPNYG00000024017 #28 Haplochromini_B ANCESTRAL SPECIES 8 ENSGT00940000160809 #9 ENSGT00390000017504 #10 ENSGT00950000183213.a.a.a #11 ENSGT00390000017489.b #12 ENSGT00940000157340.k.a #13 ENSGT01030000234586.A.b.a #14 ENSGT00940000158046.a.b #15 ENSGT00390000010768 #16 ENSGT00940000157700.c #17 ENSGT00530000063000.a.a.b.j #18 ENSGT00940000156887.b #19 ENSGT00940000154819.a.b.c.b.c.a.b ##20 ENSGT00940000177737 ENSGT00940000154819.a.b.c.b.c.a.a ##20 ENSGT00940000159089 #21 ENSGT00940000159801.B #22 ENSGT00940000165948 #23 ENSGT00940000159543 #24 ENSGT01050000244887.A.a.a.a.i #25 ENSGT00940000161143 #26 ENSGT00470000042444 #27 ENSGT00940000157140.b.b.a #28 ENSGT00950000182944.A.b.d.f.a #29 ENSGT00950000182944.A.b.d.e #29 ENSGT00950000182944.A.b.d.f.b #29 ENSGT00940000166140 #30 ENSGT00940000165343.c.a #31 ENSGT00390000017673.b.k #32 ENSGT00940000163721 #33 ENSGT00950000182916.a.b.a.a.a.b.a.a #34 ENSGT00950000182916.a.b.a.a.a.b.b.a ##34 Eastern happy MODERN SPECIES 18 ENSACLG00000009285 smdt1b (ENSACLG00000009268) #12 ENSACLG00000009244 #13 ENSACLG00000009236 KCNJ4 (ENSACLG00000009229) #14 ENSACLG00000009200 #15 rnaseh2a (ENSACLG00000009169) #16 ENSACLG00000009128 #17 MAST1 (ENSACLG00000009080) #17 atg4da (ENSACLG00000008714) #18 SMARCA4 (ENSACLG00000008638) #19 ENSACLG00000008000 ##20 ENSACLG00000007950 ENSACLG00000007886 ##20 ap1m2 (ENSACLG00000007855) #21 CDKN2D (ENSACLG00000007877) #22 ENSACLG00000007845 #23 keap1b (ENSACLG00000007822) #24 s1pr5b (ENSACLG00000007818) #25 fdx2 (ENSACLG00000007805) #26 ENSACLG00000007782 #27 ENSACLG00000007772 #28 ENSACLG00000007765 #29 NEU3 (ENSACLG00000007762) #29 NEU3 (ENSACLG00000007753) #29 ENSACLG00000007748 #30 ENSACLG00000007737 #31 HMOX1 (ENSACLG00000007729) #32 rnf11a (ENSACLG00000007714) #33 NFIX (ENSACLG00000007600) #34 dand5 (ENSACLG00000007596) #35 Zebra mbuna MODERN SPECIES 1109 zgc:158803 (ENSMZEG00005023852) #11 smdt1b (ENSMZEG00005023853) #12 ENSMZEG00005023854 #13 KCNJ4 (ENSMZEG00005023855) #14 ENSMZEG00005023856 #15 rnaseh2a (ENSMZEG00005023857) #16 ENSMZEG00005023858 #17 ENSMZEG00005023859 #17 atg4da (ENSMZEG00005023860) #18 SMARCA4 (ENSMZEG00005023861) #19 ENSMZEG00005023862 ENSMZEG00005023863 ##20 ENSMZEG00005023864 ##20 ENSMZEG00005023865 ap1m2 (ENSMZEG00005023866) #21 CDKN2D (ENSMZEG00005023867) #22 ENSMZEG00005023868 #23 keap1b (ENSMZEG00005023869) #24 s1pr5b (ENSMZEG00005023870) #25 fdx2 (ENSMZEG00005023871) #26 ENSMZEG00005023872 #27 ENSMZEG00005023873 #28 ENSMZEG00005023874 #29 NEU3 (ENSMZEG00005023875) #29 NEU3 (ENSMZEG00005023876) #29 ENSMZEG00005023877 NFIX (ENSMZEG00005023878) ##34 dand5 (ENSMZEG00005023879) #35 tspan34 (ENSMZEG00005023880) #36 RAB3D (ENSMZEG00005023881) #37 pld6 (ENSMZEG00005023882) Lyretail cichlid MODERN SPECIES 301 serhl (ENSNBRG00000018375) ##8 serhl (ENSNBRG00000018405) #8 mb (ENSNBRG00000018430) #9 ENSNBRG00000018440 #10 zgc:158803 (ENSNBRG00000018476) #11 smdt1b (ENSNBRG00000018490) #12 KCNJ4 (ENSNBRG00000018518) #14 ENSNBRG00000018705 #15 rnaseh2a (ENSNBRG00000018731) #16 MAST1 (ENSNBRG00000018757) #17 atg4da (ENSNBRG00000018815) #18 SMARCA4 (ENSNBRG00000018865) #19 ENSNBRG00000018933 ##20 ENSNBRG00000018963 ##20 ap1m2 (ENSNBRG00000019060) #21 CDKN2D (ENSNBRG00000019096) #22 ENSNBRG00000019117 #23 keap1b (ENSNBRG00000019129) #24 s1pr5b (ENSNBRG00000019138) #25 fdx2 (ENSNBRG00000019149) #26 zglp1 (ENSNBRG00000019171) #27 ENSNBRG00000019197 #28 NEU3 (ENSNBRG00000019205) #29 ENSNBRG00000019216 #30 ENSNBRG00000019223 ##31 HMOX1 (ENSNBRG00000019244) #32 rnf11a (ENSNBRG00000019250) #33 NFIX (ENSNBRG00000019307) #34 dand5 (ENSNBRG00000019412) #35 tspan34 (ENSNBRG00000019428) #36 RAB3D (ENSNBRG00000019454) #37 Nile tilapia MODERN SPECIES 18 serhl (ENSONIG00000018014) ##8 serhl (ENSONIG00000018016) #8 Mb (ENSONIG00000018018) #9 ENSONIG00000018021 #10 zgc:158803 (ENSONIG00000018025) #11 smdt1b (ENSONIG00000036008) #12 ENSONIG00000018028 #13 KCNJ4 (ENSONIG00000018031) #14 ENSONIG00000018032 #15 rnaseh2a (ENSONIG00000018033) #16 MAST1 (ENSONIG00000018034) #17 atg4da (ENSONIG00000031738) #18 SMARCA4 (ENSONIG00000018040) #19 ENSONIG00000018056 ##20 ap1m2 (ENSONIG00000018060) #21 CDKN2D (ENSONIG00000032001) #22 ENSONIG00000018063 #23 keap1b (ENSONIG00000018066) #24 s1pr5b (ENSONIG00000021227) #25 fdx2 (ENSONIG00000018067) #26 ENSONIG00000033442 #27 ENSONIG00000018068 #28 neu3e (ENSONIG00000018070) #29 NEU3 (ENSONIG00000018069) #29 ENSONIG00000028184 ENSONIG00000018071 #30 ENSONIG00000018073 #31 HMOX1 (ENSONIG00000018076) #32 rnf11a (ENSONIG00000037073) #33 NFIX (ENSONIG00000018077) #34 dand5 (ENSONIG00000018078) #35 Midas cichlid DUPLICATION Midas cichlid MODERN SPECIES 595 ENSACIG00000008912 ENSACIG00000008905 bend5 (ENSACIG00000008860) ENSACIG00000008842 AGBL4 (ENSACIG00000008810) elavl4 (ENSACIG00000008793) dmrta2 (ENSACIG00000008749) faf1 (ENSACIG00000008712) ENSACIG00000008680 #22 rnf11b (ENSACIG00000008644) TTC39A (ENSACIG00000008612) EPS15 (ENSACIG00000008531) calr (ENSACIG00000008509) tor3a (ENSACIG00000008486) osbpl9 (ENSACIG00000008374) abl2 (ENSACIG00000008184) soat1 (ENSACIG00000008124) ENSACIG00000008065 ENSACIG00000008034 CACNA1E (ENSACIG00000007982) CEP350 (ENSACIG00000007837) qsox1 (ENSACIG00000007802) lhx4 (ENSACIG00000007782) acbd6 (ENSACIG00000007757) Midas cichlid MODERN SPECIES 1199 ENSACIG00000002373 serhl (ENSACIG00000002390) #8 mb (ENSACIG00000002412) #9 ENSACIG00000002427 #10 zgc:158803 (ENSACIG00000002441) #11 smdt1b (ENSACIG00000002454) #12 KCNJ4 (ENSACIG00000002474) #14 ENSACIG00000002643 #15 rnaseh2a (ENSACIG00000002658) #16 MAST1 (ENSACIG00000002693) #17 atg4da (ENSACIG00000003005) #18 SMARCA4 (ENSACIG00000003035) #19 ENSACIG00000003107 ##20 ENSACIG00000003155 ##20 ap1m2 (ENSACIG00000003239) #21 CDKN2D (ENSACIG00000003266) #22 ENSACIG00000003274 #23 keap1b (ENSACIG00000003284) #24 s1pr5b (ENSACIG00000003324) #25 fdx2 (ENSACIG00000003335) #26 zglp1 (ENSACIG00000003353) #27 ENSACIG00000003377 #28 NEU3 (ENSACIG00000003385) #29 ENSACIG00000003395 #29 NEU3 (ENSACIG00000003415) #29 NEU3 (ENSACIG00000003494) #29 ENSACIG00000003519 #30 ENSACIG00000003529 HMOX1 (ENSACIG00000003536) #32 rnf11a (ENSACIG00000003661) #33 NFIX (ENSACIG00000003674) #34