Vertebrata ANCESTRAL SPECIES ENSGT00940000159889 #22 Gnathostomata ANCESTRAL SPECIES 55 ENSGT00940000157399 #10 ENSGT00940000155042 #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000165232 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000162270 ENSGT00940000163540 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000155136 ENSGT00940000157668 ENSGT00950000182916.a.b.a.a.a.a ENSGT00940000165098 ENSGT00940000171673 ENSGT00940000159251 ENSGT00390000017123.a ENSGT01000000214434.F ENSGT00940000162061 ENSGT00940000174128.C ENSGT00940000165489 ENSGT00410000029447 ENSGT00940000157721 ENSGT00390000007027 ENSGT00940000158038 Euteleostomi ANCESTRAL SPECIES 48 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.a.a ##12 ENSGT00940000155042.a.b ##12 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000165232 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000162270 ENSGT00940000163540 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000155136 ENSGT00940000157668 ENSGT00950000182916.a.b.a.a.a.a ENSGT00940000165098 ENSGT00940000171673 ENSGT00940000159251 ENSGT00390000017123.a ENSGT01000000214434.F ENSGT00940000162061 ENSGT00940000165489 ENSGT00410000029447 ENSGT00940000157721 ENSGT00390000007027 ENSGT00940000158038 Sarcopterygii ANCESTRAL SPECIES 100 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.a.b ##12 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000165232 ENSGT00940000162805 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000162270 ENSGT00940000163540 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000161527 ENSGT00390000011196 #29 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316 ENSGT00940000153665.b.a.b ENSGT00390000003860 ENSGT00390000015908 ENSGT00940000156897 Tetrapoda ANCESTRAL SPECIES 8 ENSGT00730000110988 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b #12 ENSGT00390000001724 #11 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000162270 ENSGT00940000163540 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000161527 ENSGT00390000011196 #29 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316 ENSGT00940000161237 ENSGT00940000153665.b.a.b ENSGT00390000003860 ENSGT00390000015908 ENSGT00940000156897 ENSGT00530000063790.a Amniota ANCESTRAL SPECIES 9 ENSGT00730000110988 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000162270 ENSGT00940000163540 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000161527.d.a ENSGT00940000161527.c ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316 ENSGT00940000161237 ENSGT00940000153665.b.a.b ENSGT00390000003860 ENSGT00390000015908 Mammalia ANCESTRAL SPECIES 47 ENSGT00730000110988 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000162270 ENSGT00940000163540 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00980000201734 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316 ENSGT00940000161237 ENSGT00940000153665.b.a.b ENSGT00390000003860 ENSGT00390000015908 ENSGT00940000156897 ENSGT00530000063790.a Theria ANCESTRAL SPECIES 3 ENSGT00940000155751 ENSGT00950000182917.a.b.a ENSGT00730000110988 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000155173 ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316 ENSGT00940000161237 ENSGT00940000153665.b.a.b Eutheria ANCESTRAL SPECIES ENSGT00730000110988 ENSGT00940000163721 ENSGT00390000000797 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173 ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316 ENSGT00940000161237 Boreoeutheria ANCESTRAL SPECIES ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00990000204587 #14 ENSGT00940000157546 #15 ENSGT00940000164707 ENSGT00940000162562.A #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173 ENSGT00940000163504 #24 ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316 Euarchontoglires ANCESTRAL SPECIES ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00990000204587 #14 ENSGT00940000157546 #15 ENSGT00940000164707 ENSGT00940000162562.A #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173 ENSGT00940000163504 #24 ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316 Primates ANCESTRAL SPECIES 4 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00990000204587 #14 ENSGT00940000157546 #15 ENSGT00940000162562.A #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927.e #26 ENSGT00940000155173 ENSGT00940000163504 #24 ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316 ENSGT00940000161237 Haplorrhini ANCESTRAL SPECIES 1 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00990000204587 #14 ENSGT00940000157546 #15 ENSGT00940000162562.A #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927.f #25 ENSGT00940000160927.e #26 ENSGT00940000155173 ENSGT00940000163504 #24 ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316 Simiiformes ANCESTRAL SPECIES 3 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00990000204587 #14 ENSGT00940000157546 #15 ENSGT00940000162562.A #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927.f #25 ENSGT00940000160927.e #26 ENSGT00940000155173 ENSGT00940000163504 #24 ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316 Catarrhini ANCESTRAL SPECIES 3 ENSGT00940000153117.B.c.a.r.b #8 ENSGT00940000154326.a.a.h #9 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00990000204587 #14 ENSGT00940000157546 #15 ENSGT00940000162562.A #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927.f #25 ENSGT00940000160927.e #26 ENSGT00940000155173 ENSGT00940000163504 #24 ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT00620000089223 #32 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a Hominoidea ANCESTRAL SPECIES 3 ENSGT00940000161649 #7 ENSGT00940000153117.B.c.a.r.b #8 ENSGT00940000154326.a.a.h #9 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00990000204587 #14 ENSGT00940000157546 #15 ENSGT00940000162562.A #16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927.f #25 ENSGT00940000160927.e #26 ENSGT00940000163504 #24 ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT00620000089223 #32 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000161237 Hominidae ANCESTRAL SPECIES 3 ENSGT00940000161649 #7 ENSGT00940000153117.B.c.a.r.b #8 ENSGT00940000154326.a.a.h #9 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00990000204587 #14 ENSGT00940000157546 #15 ENSGT00940000162562.A #16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927.f #25 ENSGT00940000160927.e #26 ENSGT00940000163504.a #24 ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT00620000089223 #32 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000161237 Homo/Pan/Gorilla group ANCESTRAL SPECIES 3 ENSGT00940000161649 #7 ENSGT00940000153117.B.c.a.r.b #8 ENSGT00940000154326.a.a.h #9 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00990000204587 #14 ENSGT00940000157546 #15 ENSGT00940000162562.A #16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000163504.a.a #24 ENSGT00940000160927.f #25 ENSGT00940000160927.e #26 ENSGT00940000163504.a.b ##24 ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT00620000089223 #32 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00910000147215 #37 Homo/Pan group ANCESTRAL SPECIES 4 ENSGT00940000161649 #7 ENSGT00940000153117.B.c.a.r.b #8 ENSGT00940000154326.a.a.h #9 ENSGT00940000157399 #10 ENSGT00940000155042.b #12 ENSGT00390000001724 #11 ENSGT00530000063821.b.a #13 ENSGT00990000204587 #14 ENSGT00940000157546 #15 ENSGT00940000162562.A #16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000163504.b ##24 ENSGT00940000160927.f #25 ENSGT00940000160927.e #26 ENSGT00940000163504.a.b ##24 ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT00620000089223 #32 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00910000147215 #37 Pan ANCESTRAL SPECIES ENSGT00940000161649 #7 ENSGT00940000153117.B.c.a.r.b #8 ENSGT00940000154326.a.a.h #9 ENSGT00940000157399 #10 ENSGT00940000155042.b #12 ENSGT00390000001724 #11 ENSGT00530000063821.b.a #13 ENSGT00990000204587 #14 ENSGT00940000157546 #15 ENSGT00940000162562.A #16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000163504.b ##24 ENSGT00940000160927.f #25 ENSGT00940000160927.e #26 ENSGT00940000163504.a.b ##24 ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT00620000089223 #32 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00910000147215 #37 Chimpanzee MODERN SPECIES DMRTA2 (ENSPTRG00000000724) #7 ENSPTRG00000051047 #8 ENSPTRG00000051295 #9 ELAVL4 (ENSPTRG00000000723) #10 BEND5 (ENSPTRG00000000721) #11 AGBL4 (ENSPTRG00000043865) #12 SPATA6 (ENSPTRG00000000718) #13 ENSPTRG00000048491 #14 SLC5A9 (ENSPTRG00000000716) #15 ENSPTRG00000043073 #16 TRABD2B (ENSPTRG00000052213) #17 FOXD2 (ENSPTRG00000030617) #18 FOXE3 (ENSPTRG00000030618) #19 CMPK1 (ENSPTRG00000000712) #20 STIL (ENSPTRG00000000711) #21 TAL1 (ENSPTRG00000051380) #22 PDZK1IP1 (ENSPTRG00000000709) #23 ENSPTRG00000000708 #24 CYP4Z1 (ENSPTRG00000000707) #25 CYP4X1 (ENSPTRG00000000706) #26 CYP4A22 (ENSPTRG00000000705) #27 CYP4B1 (ENSPTRG00000000702) #28 EFCAB14 (ENSPTRG00000000701) #29 TEX38 (ENSPTRG00000043673) #30 ATPAF1 (ENSPTRG00000043035) #31 ENSPTRG00000050559 #32 MOB3C (ENSPTRG00000000697) #33 MKNK1 (ENSPTRG00000046874) #34 KNCN (ENSPTRG00000048945) #35 TMEM275 (ENSPTRG00000052625) #36 ENSPTRG00000048531 #37 Bonobo MODERN SPECIES C1orf185 (ENSPPAG00000024891) CDKN2C (ENSPPAG00000038172) FAF1 (ENSPPAG00000032838) ENSPPAG00000033541 #7 ENSPPAG00000035672 #8 ENSPPAG00000023840 #9 ELAVL4 (ENSPPAG00000042402) #10 BEND5 (ENSPPAG00000040466) #11 AGBL4 (ENSPPAG00000033362) #12 SPATA6 (ENSPPAG00000028728) #13 ENSPPAG00000009942 #14 SLC5A9 (ENSPPAG00000034646) #15 TRABD2B (ENSPPAG00000015081) #17 ENSPPAG00000027235 #20 STIL (ENSPPAG00000037591) #21 TAL1 (ENSPPAG00000033189) #22 PDZK1IP1 (ENSPPAG00000032727) #23 CYP4A22 (ENSPPAG00000030867) ##24 CYP4Z1 (ENSPPAG00000033041) #25 CYP4X1 (ENSPPAG00000034593) #26 CYP4A11 (ENSPPAG00000040374) ##24 CYP4B1 (ENSPPAG00000033977) #28 EFCAB14 (ENSPPAG00000043833) #29 TEX38 (ENSPPAG00000034178) #30 ATPAF1 (ENSPPAG00000031376) #31 ENSPPAG00000019361 #32 MOB3C (ENSPPAG00000042553) #33 MKNK1 (ENSPPAG00000000987) #34 KNCN (ENSPPAG00000027451) #35 ENSPPAG00000037907 #37 DMBX1 (ENSPPAG00000033983) Human MODERN SPECIES RNF11 (ENSG00000123091) C1orf185 (ENSG00000204006) CDKN2C (ENSG00000123080) FAF1 (ENSG00000185104) DMRTA2 (ENSG00000142700) #7 ELAVL4 (ENSG00000162374) #10 BEND5 (ENSG00000162373) #11 AGBL4 (ENSG00000186094) #12 SPATA6 (ENSG00000132122) #13 SLC5A9 (ENSG00000117834) #15 TRABD2B (ENSG00000269113) #17 FOXD2 (ENSG00000186564) #18 FOXE3 (ENSG00000186790) #19 CMPK1 (ENSG00000162368) #20 STIL (ENSG00000123473) #21 TAL1 (ENSG00000162367) #22 PDZK1IP1 (ENSG00000162366) #23 CYP4A22 (ENSG00000162365) ##24 CYP4Z1 (ENSG00000186160) #25 CYP4X1 (ENSG00000186377) #26 CYP4A11 (ENSG00000187048) ##24 CYP4B1 (ENSG00000142973) #28 EFCAB14 (ENSG00000159658) #29 TEX38 (ENSG00000186118) #30 ATPAF1 (ENSG00000123472) #31 MOB3C (ENSG00000142961) #33 MKNK1 (ENSG00000079277) #34 KNCN (ENSG00000162456) #35 TMEM275 (ENSG00000282881) #36 DMBX1 (ENSG00000197587) FAAH (ENSG00000117480) Gorilla MODERN SPECIES C1orf185 (ENSGGOG00000015902) CDKN2C (ENSGGOG00000017023) FAF1 (ENSGGOG00000013273) ENSGGOG00000013269 #7 ENSGGOG00000024575 #8 ELAVL4 (ENSGGOG00000000634) #10 BEND5 (ENSGGOG00000003566) #11 AGBL4 (ENSGGOG00000043434) #12 SPATA6 (ENSGGOG00000001284) #13 ENSGGOG00000028320 #14 SLC5A9 (ENSGGOG00000012140) #15 ENSGGOG00000044020 #16 TRABD2B (ENSGGOG00000037702) #17 ENSGGOG00000039974 #20 STIL (ENSGGOG00000000512) #21 TAL1 (ENSGGOG00000043148) #22 PDZK1IP1 (ENSGGOG00000011765) #23 ENSGGOG00000015363 #24 ENSGGOG00000001801 #25 CYP4X1 (ENSGGOG00000000133) #26 ENSGGOG00000021983 ##24 CYP4B1 (ENSGGOG00000016855) #28 EFCAB14 (ENSGGOG00000012677) #29 TEX38 (ENSGGOG00000026717) #30 ENSGGOG00000024754 #31 ENSGGOG00000037049 #32 MOB3C (ENSGGOG00000012095) #33 MKNK1 (ENSGGOG00000012084) #34 KNCN (ENSGGOG00000012079) #35 TMEM275 (ENSGGOG00000044121) #36 ENSGGOG00000042781 #37 Orangutan MODERN SPECIES ENSPPYG00000039022 C1orf185 (ENSPPYG00000001364) CDKN2C (ENSPPYG00000001365) FAF1 (ENSPPYG00000029417) DMRTA2 (ENSPPYG00000001366) #7 ELAVL4 (ENSPPYG00000001367) #10 AGBL4 (ENSPPYG00000001368) #12 ENSPPYG00000038734 BEND5 (ENSPPYG00000001371) #11 SPATA6 (ENSPPYG00000001372) #13 SLC5A9 (ENSPPYG00000001373) #15 TRABD2B (ENSPPYG00000001376) #17 FOXD2 (ENSPPYG00000001378) #18 CMPK1 (ENSPPYG00000001380) #20 STIL (ENSPPYG00000001381) #21 ENSPPYG00000035408 #22 PDZK1IP1 (ENSPPYG00000001383) #23 CYP4Z1 (ENSPPYG00000001386) #25 CYP4X1 (ENSPPYG00000001384) #26 CYP4A22 (ENSPPYG00000001385) ##24 CYP4B1 (ENSPPYG00000001387) #28 ENSPPYG00000001388 EFCAB14 (ENSPPYG00000001389) #29 TEX38 (ENSPPYG00000001390) #30 ATPAF1 (ENSPPYG00000001391) #31 ENSPPYG00000034582 #32 MOB3C (ENSPPYG00000029604) #33 MKNK1 (ENSPPYG00000001392) #34 ENSPPYG00000001393 TMEM275 (ENSPPYG00000032094) #36 DMBX1 (ENSPPYG00000001394) Gibbon MODERN SPECIES 2 ENSNLEG00000029189 CDKN2C (ENSNLEG00000016259) FAF1 (ENSNLEG00000016263) ENSNLEG00000027959 #7 ENSNLEG00000032288 #8 ELAVL4 (ENSNLEG00000016303) #10 BEND5 (ENSNLEG00000033925) #11 AGBL4 (ENSNLEG00000016327) #12 SPATA6 (ENSNLEG00000016340) #13 ENSNLEG00000036336 #14 SLC5A9 (ENSNLEG00000016351) #15 ENSNLEG00000034414 #16 ENSNLEG00000016372 #17 ENSNLEG00000016374 #20 STIL (ENSNLEG00000016386) #21 ENSNLEG00000027215 #22 PDZK1IP1 (ENSNLEG00000016402) #23 ENSNLEG00000016409 #24 EFCAB14 (ENSNLEG00000016421) #29 TEX38 (ENSNLEG00000016440) #30 ENSNLEG00000030967 #31 MOB3C (ENSNLEG00000016442) #33 MKNK1 (ENSNLEG00000016447) #34 ENSNLEG00000016455 #35 ENSNLEG00000035328 #37 DMBX1 (ENSNLEG00000016458) FAAH (ENSNLEG00000016464) NSUN4 (ENSNLEG00000016513) ENSNLEG00000016523 LRRC41 (ENSNLEG00000016529) RAD54L (ENSNLEG00000016548) Cercopithecidae ANCESTRAL SPECIES 2 ENSGT00940000161649 #7 ENSGT00940000153117.B.c.a.r.b #8 ENSGT00940000154326.a.a.h #9 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000162562.A #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927.e #26 ENSGT00940000155173 ENSGT00940000163504.c #24 ENSGT00940000161441 #28 ENSGT00390000011196.e #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT00620000089223 #32 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316 Cercopithecinae ANCESTRAL SPECIES ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000162562.A #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000163504.d #24 ENSGT00940000160927.e #26 ENSGT00940000163504.c #24 ENSGT00940000161441 #28 ENSGT00390000011196.e #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT00620000089223 #32 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000154326.a.a.h.f #9 ENSGT00390000009405.b.c.a.a.d.b.b.b ENSGT00940000157399 #10 ENSGT00530000064407.b.b.d.i.a.a ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000162562.A #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000163504.c.a #24 ENSGT00940000160927.e #26 ENSGT00940000163504.c.b #24 ENSGT00940000161441 #28 ENSGT00390000011196.e #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT00620000089223 #32 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316 Macaca ANCESTRAL SPECIES ENSGT00940000154326.a.a.h.f #9 ENSGT00390000009405.b.c.a.a.d.b.b.b ENSGT00940000157399 #10 ENSGT00530000064407.b.b.d.i.a.a ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000162562.A #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589.g.b #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000163504.c.a #24 ENSGT00940000160927.e #26 ENSGT00940000163504.c.b #24 ENSGT00940000161441 #28 ENSGT00390000011196.e #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT00620000089223 #32 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316 Pig-tailed macaque MODERN SPECIES 217 ENSMNEG00000014551 #9 ENSMNEG00000021112 ELAVL4 (ENSMNEG00000035576) #10 ENSMNEG00000030170 BEND5 (ENSMNEG00000030902) #11 AGBL4 (ENSMNEG00000028894) #12 SPATA6 (ENSMNEG00000036437) #13 SLC5A9 (ENSMNEG00000028284) #15 ENSMNEG00000042343 #16 ENSMNEG00000023828 ##16 TRABD2B (ENSMNEG00000028952) #17 FOXD2 (ENSMNEG00000024922) #18 FOXE3 (ENSMNEG00000009558) #19 CMPK1 (ENSMNEG00000037131) #20 STIL (ENSMNEG00000044743) #21 TAL1 (ENSMNEG00000043031) #22 PDZK1IP1 (ENSMNEG00000034766) #23 ENSMNEG00000026248 #24 CYP4X1 (ENSMNEG00000024746) #26 CYP4B1 (ENSMNEG00000041426) #28 EFCAB14 (ENSMNEG00000041371) #29 TEX38 (ENSMNEG00000036840) #30 ATPAF1 (ENSMNEG00000039287) #31 ENSMNEG00000009678 #32 MOB3C (ENSMNEG00000019317) #33 MKNK1 (ENSMNEG00000037534) #34 KNCN (ENSMNEG00000027695) #35 ENSMNEG00000026469 #37 DMBX1 (ENSMNEG00000036558) FAAH (ENSMNEG00000038745) NSUN4 (ENSMNEG00000026867) Macaca_a ANCESTRAL SPECIES ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00390000009405.b.c.a.a.d.b.b.b ENSGT00940000157399 #10 ENSGT00530000064407.b.b.d.i.a.a ENSGT00940000164709.a.b.b.a.b.b.a.a.b.a.b.b.d ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000162562.A #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000160589.h #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000163504.c.a #24 ENSGT00940000160927.e #26 ENSGT00940000163504.c.b #24 ENSGT00940000161441 #28 ENSGT00390000011196.e #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT00620000089223 #32 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316 Crab-eating macaque MODERN SPECIES CDKN2C (ENSMFAG00000024172) FAF1 (ENSMFAG00000031563) DMRTA2 (ENSMFAG00000062675) #7 ENSMFAG00000020472 ELAVL4 (ENSMFAG00000039866) #10 AGBL4 (ENSMFAG00000032630) #12 ENSMFAG00000030500 ENSMFAG00000051495 SLC5A9 (ENSMFAG00000035463) #15 ENSMFAG00000049065 #16 ENSMFAG00000003658 ##16 TRABD2B (ENSMFAG00000003902) #17 ENSMFAG00000035854 #20 STIL (ENSMFAG00000024408) #21 ENSMFAG00000063835 TAL1 (ENSMFAG00000047639) #22 PDZK1IP1 (ENSMFAG00000002324) #23 CYP4A45P (ENSMFAG00000042796) #24 CYP4X1 (ENSMFAG00000000631) #26 CYP4A11 (ENSMFAG00000032544) #24 CYP4B1 (ENSMFAG00000031207) #28 ENSMFAG00000038571 #29 TEX38 (ENSMFAG00000039763) #30 MOB3C (ENSMFAG00000032003) #33 MKNK1 (ENSMFAG00000026976) #34 KNCN (ENSMFAG00000045471) #35 ENSMFAG00000016019 #37 FAAH (ENSMFAG00000046153) DMBX1 (ENSMFAG00000058375) ENSMFAG00000065640 NSUN4 (ENSMFAG00000036603) Rhesus MODERN SPECIES CDKN2C (ENSMMUG00000019057) FAF1 (ENSMMUG00000019056) DMRTA2 (ENSMMUG00000052908) #7 ELAVL4 (ENSMMUG00000021933) #10 BEND5 (ENSMMUG00000008828) #12 ENSMMUG00000056990 SPATA6 (ENSMMUG00000009282) #13 SLC5A9 (ENSMMUG00000007558) #15 ENSMMUG00000049296 TRABD2B (ENSMMUG00000032139) #17 ENSMMUG00000057159 FOXD2 (ENSMMUG00000018556) #18 FOXE3 (ENSMMUG00000064635) #19 CMPK1 (ENSMMUG00000017375) #20 STIL (ENSMMUG00000020389) #21 PDZK1IP1 (ENSMMUG00000061850) #22 CYP4A11 (ENSMMUG00000032143) #24 CYP4X1 (ENSMMUG00000018867) #26 CYP4A45 (ENSMMUG00000019871) #24 CYP4B1 (ENSMMUG00000019873) #28 ENSMMUG00000056043 #29 TEX38 (ENSMMUG00000004864) #30 ATPAF1 (ENSMMUG00000004863) #31 ENSMMUG00000056620 #32 MOB3C (ENSMMUG00000063131) #33 MKNK1 (ENSMMUG00000020162) #34 KNCN (ENSMMUG00000044038) #35 TMEM275 (ENSMMUG00000054075) #36 DMBX1 (ENSMMUG00000014634) ENSMMUG00000056382 ENSMMUG00000055679 Cercopithecinae_b ANCESTRAL SPECIES 1 ENSGT00940000154326.a.a.h.f #9 ENSGT00390000009405.b.c.a.a.d.b.b.b ENSGT00940000157399 #10 ENSGT00530000064407.b.b.d.i.a.a ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000162562.A #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927.e #26 ENSGT00940000155173 ENSGT00940000163504.c.b #24 ENSGT00940000163504.d #24 ENSGT00940000161441 #28 ENSGT00390000011196.e #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT00620000089223 #32 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a Olive baboon MODERN SPECIES FAF1 (ENSPANG00000015883) DMRTA2 (ENSPANG00000012592) #7 ENSPANG00000033296 ELAVL4 (ENSPANG00000017754) #10 AGBL4 (ENSPANG00000034366) #12 SPATA6 (ENSPANG00000014017) #13 ENSPANG00000021593 ENSPANG00000005788 ENSPANG00000011532 #16 ENSPANG00000001010 ##16 TRABD2B (ENSPANG00000012233) #17 FOXD2 (ENSPANG00000017227) #18 FOXE3 (ENSPANG00000011983) #19 CMPK1 (ENSPANG00000019968) #20 STIL (ENSPANG00000020258) #21 TAL1 (ENSPANG00000009893) #22 PDZK1IP1 (ENSPANG00000035359) #23 ENSPANG00000044971 ENSPANG00000039694 #24 CYP4X1 (ENSPANG00000009894) #26 ENSPANG00000047962 #24 CYP4B1 (ENSPANG00000005048) #28 ENSPANG00000038944 TEX38 (ENSPANG00000003011) #30 ENSPANG00000008381 #29 ENSPANG00000035797 #32 MOB3C (ENSPANG00000024015) #33 MKNK1 (ENSPANG00000017534) #34 KNCN (ENSPANG00000004348) #35 TMEM275 (ENSPANG00000042200) #36 DMBX1 (ENSPANG00000018121) Cercopithecinae_d ANCESTRAL SPECIES 191 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000162562.A #16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000163504.c.b #24 ENSGT00940000155173 ENSGT00940000160927.e #26 ENSGT00940000160927.f #25 Drill MODERN SPECIES 1345 SPATA6 (ENSMLEG00000030668) #13 SLC5A9 (ENSMLEG00000034147) #15 ENSMLEG00000032370 #16 TRABD2B (ENSMLEG00000030749) #17 ENSMLEG00000039966 #20 STIL (ENSMLEG00000042176) #21 TAL1 (ENSMLEG00000042268) #22 PDZK1IP1 (ENSMLEG00000034076) #23 Sooty mangabey MODERN SPECIES 360 BEND5 (ENSCATG00000007212) #11 AGBL4 (ENSCATG00000015277) #12 SPATA6 (ENSCATG00000012461) #13 SLC5A9 (ENSCATG00000003291) #15 ENSCATG00000002046 #16 TRABD2B (ENSCATG00000006160) #17 FOXD2 (ENSCATG00000024535) #18 FOXE3 (ENSCATG00000043314) #19 CMPK1 (ENSCATG00000013741) #20 STIL (ENSCATG00000034015) #21 TAL1 (ENSCATG00000015002) #22 PDZK1IP1 (ENSCATG00000037237) #23 CYP4A11 (ENSCATG00000037461) #24 CYP4X1 (ENSCATG00000037770) #26 CYP4Z1 (ENSCATG00000033296) #25 Vervet Monkey MODERN SPECIES 12 FAF1 (ENSCSAG00000001260) DMRTA2 (ENSCSAG00000001259) #7 ENSCSAG00000001258 ELAVL4 (ENSCSAG00000001257) #10 BEND5 (ENSCSAG00000001256) #11 ENSCSAG00000001255 #12 SPATA6 (ENSCSAG00000001254) #13 SLC5A9 (ENSCSAG00000001253) #15 ENSCSAG00000001252 #16 ENSCSAG00000001251 ##16 TRABD2B (ENSCSAG00000001250) #17 FOXD2 (ENSCSAG00000000144) #18 FOXE3 (ENSCSAG00000000143) #19 CMPK1 (ENSCSAG00000001249) #20 STIL (ENSCSAG00000001248) #21 TAL1 (ENSCSAG00000001247) #22 PDZK1IP1 (ENSCSAG00000001246) #23 ENSCSAG00000000142 CYP4A22 (ENSCSAG00000001245) #24 CYP4X1 (ENSCSAG00000001244) #26 ENSCSAG00000001243 #24 CYP4B1 (ENSCSAG00000001242) #28 EFCAB14 (ENSCSAG00000001241) #29 TEX38 (ENSCSAG00000001240) #30 ATPAF1 (ENSCSAG00000001239) #31 MOB3C (ENSCSAG00000001238) #33 MKNK1 (ENSCSAG00000001237) #34 KNCN (ENSCSAG00000001236) #35 DMBX1 (ENSCSAG00000001235) ENSCSAG00000001234 FAAH (ENSCSAG00000001233) Rhinopithecus ANCESTRAL SPECIES 172 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000162562.A #16 ENSGT00940000162562.B ##16 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927.e #26 ENSGT00940000163504.c #24 ENSGT00940000161441 #28 ENSGT00390000011196.e #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT00620000089223 #32 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00940000155505.a ENSGT00940000161237 ENSGT00940000153665.b.a.b ENSGT00390000003860.h.a.a Golden snub-nosed monkey MODERN SPECIES 3136 ENSRROG00000037228 #13 SLC5A9 (ENSRROG00000044270) #15 ENSRROG00000039977 #16 ENSRROG00000036867 TRABD2B (ENSRROG00000044560) #17 ENSRROG00000026568 ENSRROG00000010148 CMPK1 (ENSRROG00000031992) #20 STIL (ENSRROG00000030013) #21 TAL1 (ENSRROG00000039099) #22 PDZK1IP1 (ENSRROG00000033498) #23 Black snub-nosed monkey MODERN SPECIES 397 HNF1A (ENSRBIG00000031269) C12orf43 (ENSRBIG00000031760) OASL (ENSRBIG00000008349) P2RX7 (ENSRBIG00000029477) P2RX4 (ENSRBIG00000042757) CAMKK2 (ENSRBIG00000044477) ANAPC5 (ENSRBIG00000037151) RNF34 (ENSRBIG00000018498) KDM2B (ENSRBIG00000023758) ORAI1 (ENSRBIG00000030978) MORN3 (ENSRBIG00000040619) TRABD2B (ENSRBIG00000041716) #17 ENSRBIG00000011168 CMPK1 (ENSRBIG00000032439) #20 STIL (ENSRBIG00000044869) #21 TAL1 (ENSRBIG00000036740) #22 PDZK1IP1 (ENSRBIG00000034153) #23 CYP4X1 (ENSRBIG00000027136) #26 Platyrrhini ANCESTRAL SPECIES ENSGT00390000000797 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00990000204587 #14 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927.f #25 ENSGT00940000160927.e #26 ENSGT00940000163504 #24 ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00950000183210.d.a.c.b.a.b ENSGT00940000155505.a ENSGT00940000163316 ENSGT00940000161237 Cebidae ANCESTRAL SPECIES 1 ENSGT00390000000797 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00990000204587 #14 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927.f #25 ENSGT00940000160927.e #26 ENSGT00940000163504 #24 ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00950000183210.d.a.c.b.a.b ENSGT00940000155505.a ENSGT00940000163316 Cebidae_a ANCESTRAL SPECIES ENSGT00390000000797 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00990000204587 #14 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927.f #25 ENSGT00940000160927.e #26 ENSGT00940000163504 #24 ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00950000183210.d.a.c.b.a.b ENSGT00940000155505.a ENSGT00940000163316 Capuchin MODERN SPECIES 129 NKTR (ENSCCAG00000022319) ENSCCAG00000036916 SEC22C (ENSCCAG00000021135) VIPR1 (ENSCCAG00000033283) LYZL4 (ENSCCAG00000024892) CCK (ENSCCAG00000022026) TRAK1 (ENSCCAG00000021868) ULK4 (ENSCCAG00000022062) CTNNB1 (ENSCCAG00000025732) ENSCCAG00000030203 ZNF620 (ENSCCAG00000028566) ZNF619 (ENSCCAG00000036815) RPL14 (ENSCCAG00000031843) ENTPD3 (ENSCCAG00000025218) STIL (ENSCCAG00000032844) #21 TAL1 (ENSCCAG00000036543) #22 PDZK1IP1 (ENSCCAG00000019206) #23 ENSCCAG00000030032 CYP4Z1 (ENSCCAG00000003974) #25 CYP4X1 (ENSCCAG00000023529) #26 CYP4A11 (ENSCCAG00000032011) #24 CYP4B1 (ENSCCAG00000032640) #28 ENSCCAG00000034040 #29 TEX38 (ENSCCAG00000022007) #30 ATPAF1 (ENSCCAG00000036733) #31 MOB3C (ENSCCAG00000034971) #33 ENSCCAG00000024273 KNCN (ENSCCAG00000022467) #35 DMBX1 (ENSCCAG00000037490) FAAH (ENSCCAG00000029850) NSUN4 (ENSCCAG00000030478) Marmoset MODERN SPECIES 19 CDKN2C (ENSCJAG00000060144) DMRTA2 (ENSCJAG00000041134) #7 FAF1 (ENSCJAG00000021555) ELAVL4 (ENSCJAG00000013725) #10 ENSCJAG00000078422 BEND5 (ENSCJAG00000021284) #11 ENSCJAG00000081866 SPATA6 (ENSCJAG00000039778) #13 SLC5A9 (ENSCJAG00000021271) #15 TRABD2B (ENSCJAG00000042725) #17 ENSCJAG00000071656 FOXD2 (ENSCJAG00000021263) #18 FOXE3 (ENSCJAG00000038878) #19 CMPK1 (ENSCJAG00000021250) #20 STIL (ENSCJAG00000021228) #21 TAL1 (ENSCJAG00000053562) #22 PDZK1IP1 (ENSCJAG00000046011) #23 ENSCJAG00000083949 ENSCJAG00000062966 #24 CYP4X1 (ENSCJAG00000043987) #26 EFCAB14 (ENSCJAG00000046008) #29 TEX38 (ENSCJAG00000021163) #30 ATPAF1 (ENSCJAG00000070547) #31 MOB3C (ENSCJAG00000021158) #33 MKNK1 (ENSCJAG00000021149) #34 KNCN (ENSCJAG00000021147) #35 DMBX1 (ENSCJAG00000072588) FAAH (ENSCJAG00000021138) NSUN4 (ENSCJAG00000021132) ENSCJAG00000070283 LRRC41 (ENSCJAG00000021111) Mas night monkey MODERN SPECIES 679 FAF1 (ENSANAG00000033702) ENSANAG00000028849 ENSANAG00000028980 ENSANAG00000022650 DMRTA2 (ENSANAG00000033164) #7 ELAVL4 (ENSANAG00000030598) #10 ENSANAG00000031055 AGBL4 (ENSANAG00000022272) #12 BEND5 (ENSANAG00000018794) #11 SPATA6 (ENSANAG00000033722) #13 SLC5A9 (ENSANAG00000022766) #15 TRABD2B (ENSANAG00000036722) #17 FOXE3 (ENSANAG00000019840) #19 CMPK1 (ENSANAG00000033187) #20 STIL (ENSANAG00000025280) #21 TAL1 (ENSANAG00000018338) #22 PDZK1IP1 (ENSANAG00000037310) #23 CYP4Z1 (ENSANAG00000032825) #25 CYP4X1 (ENSANAG00000034247) #26 ENSANAG00000035850 CYP4A11 (ENSANAG00000019404) #24 EFCAB14 (ENSANAG00000023693) #29 TEX38 (ENSANAG00000022553) #30 ATPAF1 (ENSANAG00000033472) #31 MOB3C (ENSANAG00000036313) #33 MKNK1 (ENSANAG00000022817) #34 KNCN (ENSANAG00000036447) #35 ENSANAG00000029807 DMBX1 (ENSANAG00000036763) FAAH (ENSANAG00000012697) NSUN4 (ENSANAG00000022673) Tarsier MODERN SPECIES 1812 CMPK1 (ENSTSYG00000007511) #20 STIL (ENSTSYG00000012968) #21 TAL1 (ENSTSYG00000028621) #22 PDZK1IP1 (ENSTSYG00000032681) #23 CYP4Z1 (ENSTSYG00000036671) #25 CYP4X1 (ENSTSYG00000002860) #26 CYP4A11 (ENSTSYG00000000336) #24 Strepsirrhini ANCESTRAL SPECIES ENSGT00390000000797 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b #12 ENSGT00390000001724 #11 ENSGT00530000063821.b.a #13 ENSGT00990000204587 #14 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927.e #26 ENSGT00940000163504 #24 ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316 ENSGT00940000161237 Bushbaby MODERN SPECIES 325 ENSOGAG00000028761 #16 FOXD2 (ENSOGAG00000003055) #18 CMPK1 (ENSOGAG00000026904) #20 STIL (ENSOGAG00000016561) #21 TAL1 (ENSOGAG00000016551) #22 PDZK1IP1 (ENSOGAG00000026954) #23 CYP4X1 (ENSOGAG00000016547) #26 ENSOGAG00000014461 #24 CYP4B1 (ENSOGAG00000014453) #28 ENSOGAG00000027560 EFCAB14 (ENSOGAG00000014445) #29 ATPAF1 (ENSOGAG00000014436) #31 MOB3C (ENSOGAG00000032036) #33 ENSOGAG00000014430 KNCN (ENSOGAG00000031622) #35 DMBX1 (ENSOGAG00000005074) ENSOGAG00000027019 FAAH (ENSOGAG00000003542) ENSOGAG00000030900 NSUN4 (ENSOGAG00000014079) Lemuriformes ANCESTRAL SPECIES ENSGT00390000000797 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b #12 ENSGT00390000001724 #11 ENSGT00530000063821.b.a #13 ENSGT00990000204587 #14 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927.e #26 ENSGT00940000163504 #24 ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316 ENSGT00940000161237 Mouse lemur MODERN SPECIES 11 C1orf185 (ENSMICG00000004061) CDKN2C (ENSMICG00000033935) FAF1 (ENSMICG00000003299) DMRTA2 (ENSMICG00000044233) #7 ELAVL4 (ENSMICG00000003286) #10 AGBL4 (ENSMICG00000003275) #12 ENSMICG00000037766 BEND5 (ENSMICG00000003282) #11 SPATA6 (ENSMICG00000003269) #13 SLC5A9 (ENSMICG00000012426) #15 TRABD2B (ENSMICG00000033266) #17 FOXD2 (ENSMICG00000034204) #18 FOXE3 (ENSMICG00000029422) #19 CMPK1 (ENSMICG00000005386) #20 STIL (ENSMICG00000005402) #21 TAL1 (ENSMICG00000045732) #22 PDZK1IP1 (ENSMICG00000043731) #23 CYP4B1 (ENSMICG00000000962) #28 ENSMICG00000031270 CYP4A11 (ENSMICG00000000965) #24 EFCAB14 (ENSMICG00000047159) #29 TEX38 (ENSMICG00000000074) #30 ATPAF1 (ENSMICG00000000075) #31 ENSMICG00000000071 KNCN (ENSMICG00000037994) #35 TMEM275 (ENSMICG00000043204) #36 DMBX1 (ENSMICG00000045428) ENSMICG00000041885 FAAH (ENSMICG00000010595) ENSMICG00000035628 NSUN4 (ENSMICG00000043368) Lemuriformes_a ANCESTRAL SPECIES 20 ENSGT00390000000797 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b #12 ENSGT00390000001724 #11 ENSGT00530000063821.b.a #13 ENSGT00990000204587 #14 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927.e #26 ENSGT00940000163504 #24 ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000161237 ENSGT00940000153665.b.a.b Greater bamboo lemur MODERN SPECIES 358 SPATA6 (ENSPSMG00000012753) #13 ENSPSMG00000012764 #14 SLC5A9 (ENSPSMG00000012801) #15 TRABD2B (ENSPSMG00000012821) #17 FOXD2 (ENSPSMG00000012827) #18 FOXE3 (ENSPSMG00000012832) #19 CMPK1 (ENSPSMG00000012868) #20 STIL (ENSPSMG00000012951) #21 TAL1 (ENSPSMG00000013005) #22 PDZK1IP1 (ENSPSMG00000013009) #23 CYP4X1 (ENSPSMG00000013014) #26 ENSPSMG00000013059 #24 CYP4B1 (ENSPSMG00000013132) #28 EFCAB14 (ENSPSMG00000013162) #29 TEX38 (ENSPSMG00000013186) #30 ATPAF1 (ENSPSMG00000013241) #31 MOB3C (ENSPSMG00000013309) #33 ENSPSMG00000013339 KNCN (ENSPSMG00000013375) #35 TMEM275 (ENSPSMG00000013378) #36 DMBX1 (ENSPSMG00000013384) FAAH (ENSPSMG00000013423) NSUN4 (ENSPSMG00000013445) ENSPSMG00000013454 Coquerels sifaka MODERN SPECIES 423 TRABD2B (ENSPCOG00000023424) #17 FOXD2 (ENSPCOG00000013642) #18 FOXE3 (ENSPCOG00000005648) #19 CMPK1 (ENSPCOG00000003467) #20 STIL (ENSPCOG00000026133) #21 TAL1 (ENSPCOG00000017701) #22 PDZK1IP1 (ENSPCOG00000013383) #23 CYP4X1 (ENSPCOG00000000055) #26 CYP4A11 (ENSPCOG00000022305) #24 CYP4B1 (ENSPCOG00000016915) #28 EFCAB14 (ENSPCOG00000027313) #29 ENSPCOG00000021920 ENSPCOG00000004448 TEX38 (ENSPCOG00000027518) #30 ATPAF1 (ENSPCOG00000017548) #31 MOB3C (ENSPCOG00000022632) #33 MKNK1 (ENSPCOG00000026912) #34 KNCN (ENSPCOG00000027106) #35 TMEM275 (ENSPCOG00000027485) #36 DMBX1 (ENSPCOG00000017204) FAAH (ENSPCOG00000022513) Euarchontoglires_A ANCESTRAL SPECIES ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b #12 ENSGT00390000001724 #11 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000164707 ENSGT00940000162562.A #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173 ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000161237 ENSGT00500000045816 Glires ANCESTRAL SPECIES ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b #12 ENSGT00390000001724 #11 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000164707 ENSGT00940000162562.A #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173 ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000161237 ENSGT00500000045816 Lagomorpha ANCESTRAL SPECIES 8 ENSGT00950000182917.a.b.a ENSGT00730000110988 ENSGT00390000000797 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.a.b ##12 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00980000201734 ENSGT00940000160927 #25 ENSGT00940000155173 ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000162886 #34 ENSGT00940000155505.a ENSGT00940000161237 ENSGT00940000153665.b.a.b Pika MODERN SPECIES 4141 STIL (ENSOPRG00000004039) #21 TAL1 (ENSOPRG00000004033) #22 ENSOPRG00000004006 CYP4X1 (ENSOPRG00000003967) #25 Rabbit MODERN SPECIES 4 ENSOCUG00000029778 ENSOCUG00000031084 ENSOCUG00000035051 ENSOCUG00000023561 ENSOCUG00000011146 ENSOCUG00000033406 ##12 BEND5 (ENSOCUG00000006471) #11 ENSOCUG00000006460 #12 SPATA6 (ENSOCUG00000008704) #13 ENSOCUG00000021113 SLC5A9 (ENSOCUG00000007119) #15 ENSOCUG00000031714 TRABD2B (ENSOCUG00000035774) #17 CMPK1 (ENSOCUG00000012424) #20 STIL (ENSOCUG00000013586) #21 TAL1 (ENSOCUG00000017248) #22 ENSOCUG00000038723 ENSOCUG00000030697 CYP4X1 (ENSOCUG00000008267) #25 ENSOCUG00000034966 ENSOCUG00000034574 CYP4A5 (ENSOCUG00000025702) CYP4B1 (ENSOCUG00000011201) #28 ENSOCUG00000012284 EFCAB14 (ENSOCUG00000006616) #29 TEX38 (ENSOCUG00000006612) #30 ATPAF1 (ENSOCUG00000009230) #31 MOB3C (ENSOCUG00000021111) #33 ENSOCUG00000003495 KNCN (ENSOCUG00000005134) #35 TMEM275 (ENSOCUG00000030363) #36 Rodentia ANCESTRAL SPECIES ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b #12 ENSGT00390000001724 #11 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000164707 ENSGT00940000162562.A #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.f.a ENSGT00940000155173.f.b.a ENSGT00940000163570 ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a Rodentia_B ANCESTRAL SPECIES ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b #12 ENSGT00390000001724 #11 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000164707 ENSGT00940000162562.A #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.f.b.a ENSGT00940000155173.f.b.b ENSGT00940000163570 ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a Kangaroo rat MODERN SPECIES 352 ENSDORG00000010715 Tnni3k (ENSDORG00000010710) Fpgt (ENSDORG00000028813) ENSDORG00000023988 Faf1 (ENSDORG00000015487) Dmrta2 (ENSDORG00000015486) #7 Elavl4 (ENSDORG00000012729) #10 Bend5 (ENSDORG00000005815) #11 Agbl4 (ENSDORG00000012728) #12 Spata6 (ENSDORG00000010310) #13 Slc5a9 (ENSDORG00000010547) #15 Trabd2b (ENSDORG00000023562) #17 Foxd2 (ENSDORG00000028126) #18 Cmpk1 (ENSDORG00000004576) #20 Stil (ENSDORG00000004571) #21 Tal1 (ENSDORG00000028266) #22 Pdzk1ip1 (ENSDORG00000004566) #23 Cyp4x1 (ENSDORG00000015306) #25 ENSDORG00000027207 ENSDORG00000008850 ENSDORG00000028283 ENSDORG00000024423 ENSDORG00000002019 Cyp4b1 (ENSDORG00000002018) #28 Efcab14 (ENSDORG00000006628) #29 Tex38 (ENSDORG00000006627) #30 Atpaf1 (ENSDORG00000007212) #31 Mob3c (ENSDORG00000007210) #33 Mknk1 (ENSDORG00000007207) #34 Kncn (ENSDORG00000025447) #35 Dmbx1 (ENSDORG00000023987) Myomorpha ANCESTRAL SPECIES 3 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b #12 ENSGT00390000001724 #11 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000164707 ENSGT00940000162562.A #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.f.b.a ENSGT00940000155173.f.b.b ENSGT00940000163570 ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a Muroidea ANCESTRAL SPECIES 3 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b #12 ENSGT00390000001724 #11 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000164707 ENSGT00940000162562.A #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.f.b.a ENSGT00940000155173.f.b.b ENSGT00940000163570 ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a Upper Galilee mountains blind mole rat MODERN SPECIES 349 Foxd2 (ENSNGAG00000001638) #18 Foxe3 (ENSNGAG00000016532) #19 Cmpk1 (ENSNGAG00000024189) #20 Stil (ENSNGAG00000019917) #21 Tal1 (ENSNGAG00000021898) #22 Pdzk1ip1 (ENSNGAG00000020464) #23 Cyp4x1 (ENSNGAG00000019524) #25 Muroidea_A ANCESTRAL SPECIES 3 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b #12 ENSGT00390000001724 #11 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000164707 ENSGT00940000162562.A.a.b #16 ENSGT00940000162562.A.a.a.b #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.f.b.a ENSGT00940000163570.e.a ENSGT00940000155173.f.b.b ENSGT00940000163570.f ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 Murinae ANCESTRAL SPECIES 2 ENSGT00940000157399 #10 ENSGT00940000155042.b #12 ENSGT00390000001724 #11 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000164707 ENSGT00940000162562.A.a.b #16 ENSGT00940000162562.A.a.a.b #16 ENSGT00940000165990.a ENSGT00940000165990.b ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.f.b.a ENSGT00940000163570.e.a ENSGT00940000155173.f.b.b ENSGT00940000163570.f ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a Mus ANCESTRAL SPECIES 3 ENSGT00390000001724 #11 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000164707.a ENSGT00940000164707.b ENSGT00940000162562.A.a.b #16 ENSGT00940000162562.A.a.a.b #16 ENSGT00940000165990.a ENSGT00940000165990.b ENSGT00940000161273 #17 ENSGT00520000058517 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.f.a ENSGT00940000163570.e.a ENSGT00940000155173.f.b.b ENSGT00940000163570.f ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a Mus_A ANCESTRAL SPECIES 3 ENSGT00940000155042.b #12 ENSGT00390000001724 #11 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000164707.a ENSGT00940000164707.b ENSGT00940000162562.A.a.b #16 ENSGT00940000162562.A.a.a.b.b #16 ENSGT00940000165990.b.a ENSGT00940000161273 #17 ENSGT00520000058517 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.f.a ENSGT00940000155173.f.b.a ENSGT00940000163570.e.a ENSGT00940000155173.f.b.b ENSGT00940000163570.f ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 Ryukyu mouse MODERN SPECIES 13 Dmrta2 (MGP_CAROLIEiJ_G0026288) #7 Elavl4 (MGP_CAROLIEiJ_G0026289) #10 Agbl4 (MGP_CAROLIEiJ_G0026290) #12 Bend5 (MGP_CAROLIEiJ_G0026291) #11 Spata6 (MGP_CAROLIEiJ_G0026292) #13 Slc5a9 (MGP_CAROLIEiJ_G0026293) #15 MGP_CAROLIEiJ_G0026294 Skint1 (MGP_CAROLIEiJ_G0026296) #16 MGP_CAROLIEiJ_G0026297 #16 Skint10 (MGP_CAROLIEiJ_G0026298) Trabd2b (MGP_CAROLIEiJ_G0026299) #17 Foxd2 (MGP_CAROLIEiJ_G0026300) #18 Foxe3 (MGP_CAROLIEiJ_G0026301) #19 Cmpk1 (MGP_CAROLIEiJ_G0026302) #20 Stil (MGP_CAROLIEiJ_G0026303) #21 Tal1 (MGP_CAROLIEiJ_G0026304) #22 MGP_CAROLIEiJ_G0026305 #23 Cyp4x1 (MGP_CAROLIEiJ_G0026306) #25 Cyp4a29 (MGP_CAROLIEiJ_G0026307) MGP_CAROLIEiJ_G0026308 MGP_CAROLIEiJ_G0026309 MGP_CAROLIEiJ_G0026310 Cyp4b1 (MGP_CAROLIEiJ_G0026312) #28 Efcab14 (MGP_CAROLIEiJ_G0026313) #29 Tex38 (MGP_CAROLIEiJ_G0026314) #30 Atpaf1 (MGP_CAROLIEiJ_G0026315) #31 Mob3c (MGP_CAROLIEiJ_G0026316) #33 Mknk1 (MGP_CAROLIEiJ_G0026317) #34 Kncn (MGP_CAROLIEiJ_G0026318) #35 Tmem275 (MGP_CAROLIEiJ_G0026319) #36 Dmbx1 (MGP_CAROLIEiJ_G0026320) Mus_B ANCESTRAL SPECIES 5 ENSGT00940000155042.b #12 ENSGT00390000001724 #11 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000164707.a ENSGT00940000164707.b ENSGT00940000162562.A.a.b #16 ENSGT00940000162562.A.a.a.b.b #16 ENSGT00940000165990.b.a ENSGT00940000161273 #17 ENSGT00520000058517 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.f.a ENSGT00940000155173.f.b.a ENSGT00940000163570.e.a ENSGT00940000155173.f.b.b ENSGT00940000163570.f.c.a ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 Mus_C ANCESTRAL SPECIES 2 ENSGT00940000155042.b #12 ENSGT00390000001724 #11 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000164707.a ENSGT00940000164707.b ENSGT00940000162562.A.a.b #16 ENSGT00940000162562.A.a.a.b.b #16 ENSGT00940000165990.b.a ENSGT00940000161273 #17 ENSGT00520000058517 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.f.a ENSGT00940000155173.f.b.a ENSGT00940000163570.e.a ENSGT00940000155173.f.b.b ENSGT00940000163570.f.c.a ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00940000162886 #34 ENSGT00400000024146 #35 Steppe mouse MODERN SPECIES 2738 Trabd2b (ENSMSIG00000032122) #17 Foxd2 (ENSMSIG00000032118) #18 Foxe3 (ENSMSIG00000032117) #19 Cmpk1 (ENSMSIG00000032116) #20 Stil (ENSMSIG00000032114) #21 Tal1 (ENSMSIG00000032112) #22 Pdzk1ip1 (ENSMSIG00000032111) #23 Cyp4x1 (ENSMSIG00000032110) #25 spretus MODERN SPECIES 13 Bend5 (MGP_SPRETEiJ_G0027260) #11 Spata6 (MGP_SPRETEiJ_G0027261) #13 Slc5a9 (MGP_SPRETEiJ_G0027262) #15 Skint7 (MGP_SPRETEiJ_G0027263) MGP_SPRETEiJ_G0027264 Skint1 (MGP_SPRETEiJ_G0027265) #16 Skint2 (MGP_SPRETEiJ_G0027266) #16 Skint10 (MGP_SPRETEiJ_G0027267) MGP_SPRETEiJ_G0027269 Trabd2b (MGP_SPRETEiJ_G0027270) #17 MGP_SPRETEiJ_G0027271 Foxd2 (MGP_SPRETEiJ_G0027272) #18 Foxe3 (MGP_SPRETEiJ_G0027273) #19 Cmpk1 (MGP_SPRETEiJ_G0027274) #20 Stil (MGP_SPRETEiJ_G0027275) #21 Tal1 (MGP_SPRETEiJ_G0027276) #22 Pdzk1ip1 (MGP_SPRETEiJ_G0027277) #23 Cyp4x1 (MGP_SPRETEiJ_G0027278) #25 MGP_SPRETEiJ_G0027279 MGP_SPRETEiJ_G0027280 MGP_SPRETEiJ_G0027281 MGP_SPRETEiJ_G0027282 Cyp4a14 (MGP_SPRETEiJ_G0027283) Cyp4b1 (MGP_SPRETEiJ_G0027284) #28 Efcab14 (MGP_SPRETEiJ_G0027285) #29 Tex38 (MGP_SPRETEiJ_G0027286) #30 Atpaf1 (MGP_SPRETEiJ_G0027287) #31 Mob3c (MGP_SPRETEiJ_G0027288) #33 Mknk1 (MGP_SPRETEiJ_G0027289) #34 Kncn (MGP_SPRETEiJ_G0027290) #35 Tmem275 (MGP_SPRETEiJ_G0027291) #36 Mouse MODERN SPECIES 13 Skint7 (ENSMUSG00000049214) Skint1 (ENSMUSG00000089773) #16 Skint4 (ENSMUSG00000055960) #16 Skint3 (ENSMUSG00000070868) #16 Skint9 (ENSMUSG00000049972) Skint2 (ENSMUSG00000034359) #16 Skint10 (ENSMUSG00000048766) Skint6 (ENSMUSG00000087194) #16 Skint5 (ENSMUSG00000078598) #16 Skint11 (ENSMUSG00000057977) Trabd2b (ENSMUSG00000070867) #17 Foxd2 (ENSMUSG00000055210) #18 Foxe3 (ENSMUSG00000044518) #19 Cmpk1 (ENSMUSG00000028719) #20 Stil (ENSMUSG00000028718) #21 Tal1 (ENSMUSG00000028717) #22 Pdzk1ip1 (ENSMUSG00000028716) #23 Cyp4x1 (ENSMUSG00000047155) #25 Cyp4a29 (ENSMUSG00000083138) Cyp4a12a (ENSMUSG00000066071) Cyp4a12b (ENSMUSG00000078597) Cyp4a30b (ENSMUSG00000084346) Cyp4a14 (ENSMUSG00000028715) Cyp4a10 (ENSMUSG00000066072) Cyp4a31 (ENSMUSG00000028712) Cyp4a32 (ENSMUSG00000063929) Cyp4b1 (ENSMUSG00000028713) #28 Efcab14 (ENSMUSG00000034210) #29 Tex38 (ENSMUSG00000044556) #30 Atpaf1 (ENSMUSG00000028710) #31 Mob3c (ENSMUSG00000028709) #33 Shrew mouse MODERN SPECIES 19 Agbl4 (MGP_PahariEiJ_G0028623) #12 Bend5 (MGP_PahariEiJ_G0028624) #11 Spata6 (MGP_PahariEiJ_G0028625) #13 Slc5a9 (MGP_PahariEiJ_G0028626) #15 MGP_PahariEiJ_G0028627 MGP_PahariEiJ_G0028628 Skint1 (MGP_PahariEiJ_G0028629) #16 MGP_PahariEiJ_G0028630 #16 MGP_PahariEiJ_G0028631 Trabd2b (MGP_PahariEiJ_G0028632) #17 MGP_PahariEiJ_G0028633 Foxd2 (MGP_PahariEiJ_G0028634) #18 Foxe3 (MGP_PahariEiJ_G0028635) #19 Cmpk1 (MGP_PahariEiJ_G0028636) #20 Stil (MGP_PahariEiJ_G0028637) #21 Tal1 (MGP_PahariEiJ_G0028638) #22 MGP_PahariEiJ_G0028639 #23 Cyp4x1 (MGP_PahariEiJ_G0028640) #25 Cyp4a29 (MGP_PahariEiJ_G0028641) Cyp4a14 (MGP_PahariEiJ_G0028642) MGP_PahariEiJ_G0028643 Cyp4b1 (MGP_PahariEiJ_G0028644) #28 Efcab14 (MGP_PahariEiJ_G0028645) #29 Tex38 (MGP_PahariEiJ_G0028646) #30 Atpaf1 (MGP_PahariEiJ_G0028647) #31 Mob3c (MGP_PahariEiJ_G0028648) #33 Mknk1 (MGP_PahariEiJ_G0028649) #34 Kncn (MGP_PahariEiJ_G0028650) #35 Tmem275 (MGP_PahariEiJ_G0028651) #36 Dmbx1 (MGP_PahariEiJ_G0028652) Faah (MGP_PahariEiJ_G0028653) Rat MODERN SPECIES 15 Slc5a9 (ENSRNOG00000042950) #15 Skint8 (ENSRNOG00000037680) Skint1 (ENSRNOG00000043194) #16 Skint4 (ENSRNOG00000042047) #16 ENSRNOG00000063827 #16 ENSRNOG00000067562 #16 ENSRNOG00000063781 ENSRNOG00000068199 LOC100911818 (ENSRNOG00000067091) Skint10 (ENSRNOG00000022988) Trabd2b (ENSRNOG00000029141) #17 Foxd2 (ENSRNOG00000007759) #18 Foxe3 (ENSRNOG00000007770) #19 Cmpk1 (ENSRNOG00000007775) #20 Stil (ENSRNOG00000057760) #21 Tal1 (ENSRNOG00000025051) #22 Pdzk1ip1 (ENSRNOG00000008161) #23 Cyp4x1 (ENSRNOG00000043513) #25 Cyp4a8 (ENSRNOG00000008842) LOC120102953 (ENSRNOG00000066487) Cyp4a2 (ENSRNOG00000064139) Cyp4a3 (ENSRNOG00000066878) Cyp4a1 (ENSRNOG00000009597) Cyp4b1 (ENSRNOG00000055078) #28 Efcab14 (ENSRNOG00000010091) #29 Tex38 (ENSRNOG00000010162) #30 Atpaf1 (ENSRNOG00000010169) #31 Mob3c (ENSRNOG00000037620) #33 Mknk1 (ENSRNOG00000010381) Kncn (ENSRNOG00000037618) #35 Tmem275 (ENSRNOG00000066278) #36 Cricetidae ANCESTRAL SPECIES 2 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b #12 ENSGT00390000001724 #11 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000164707.d ENSGT00940000162562.A.a.b #16 ENSGT00940000162562.A.a.a.b #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.f.b.a ENSGT00940000163570.e.b ENSGT00940000155173.f.b.b ENSGT00940000163570.e.a ENSGT00940000163570.f ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00400000024146 #35 ENSGT00390000008086 #36 Cricetidae_B ANCESTRAL SPECIES 2 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b #12 ENSGT00390000001724 #11 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000164707.d ENSGT00940000162562.A.a.b #16 ENSGT00940000162562.A.a.a.b #16 ENSGT00940000165990 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.f.b.a ENSGT00940000163570.e.a ENSGT00940000155173.f.b.b ENSGT00940000163570.f ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a Northern American deer mouse MODERN SPECIES 11 Agbl4 (ENSPEMG00000023297) #12 Bend5 (ENSPEMG00000022292) #11 Spata6 (ENSPEMG00000022120) #13 Slc5a9 (ENSPEMG00000021770) #15 ENSPEMG00000021177 Skint1 (ENSPEMG00000011155) #16 ENSPEMG00000021558 #16 ENSPEMG00000030740 #16 ENSPEMG00000026129 ENSPEMG00000023162 #16 ENSPEMG00000008143 Trabd2b (ENSPEMG00000021574) #17 Foxe3 (ENSPEMG00000025577) #19 Cmpk1 (ENSPEMG00000021852) #20 Stil (ENSPEMG00000023881) #21 Tal1 (ENSPEMG00000024420) #22 ENSPEMG00000022028 #23 Cyp4x1 (ENSPEMG00000021657) #25 ENSPEMG00000021445 Cyp4a14 (ENSPEMG00000021401) ENSPEMG00000023206 Cyp4b1 (ENSPEMG00000022964) #28 Efcab14 (ENSPEMG00000021842) #29 Tex38 (ENSPEMG00000030507) #30 Atpaf1 (ENSPEMG00000028185) #31 Mob3c (ENSPEMG00000027471) #33 ENSPEMG00000022552 Kncn (ENSPEMG00000025397) #35 Tmem275 (ENSPEMG00000025552) #36 Dmbx1 (ENSPEMG00000023516) Faah (ENSPEMG00000008896) Prairie vole MODERN SPECIES 1 Dmrta2 (ENSMOCG00000018451) #7 Elavl4 (ENSMOCG00000010309) #10 Agbl4 (ENSMOCG00000016733) #12 Bend5 (ENSMOCG00000003340) #11 ENSMOCG00000021709 #13 Slc5a9 (ENSMOCG00000022328) #15 ENSMOCG00000019561 ENSMOCG00000003588 #16 ENSMOCG00000013586 #16 ENSMOCG00000012467 Trabd2b (ENSMOCG00000002510) #17 Foxd2 (ENSMOCG00000002875) #18 Foxe3 (ENSMOCG00000008738) #19 Cmpk1 (ENSMOCG00000019310) #20 Stil (ENSMOCG00000001995) #21 Tal1 (ENSMOCG00000015608) #22 Pdzk1ip1 (ENSMOCG00000021926) #23 Cyp4x1 (ENSMOCG00000021415) #25 ENSMOCG00000020038 ENSMOCG00000001637 ENSMOCG00000018767 ENSMOCG00000017511 ENSMOCG00000000985 Kcnab2 (ENSMOCG00000014027) Chd5 (ENSMOCG00000011049) Rpl22 (ENSMOCG00000013028) Rnf207 (ENSMOCG00000018350) Icmt (ENSMOCG00000018502) Hes3 (ENSMOCG00000000573) Gpr153 (ENSMOCG00000001689) Acot7 (ENSMOCG00000007542) Cricetinae ANCESTRAL SPECIES 5 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000164707.d ENSGT00940000162562.A.a.b #16 ENSGT00940000162562.A.a.a.b #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000163570.e.b ENSGT00940000155173.f.b.b ENSGT00940000163570.e.a ENSGT00940000163570.f ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a Golden Hamster MODERN SPECIES 648 Bend5 (ENSMAUG00000007838) #11 Agbl4 (ENSMAUG00000020446) #12 ENSMAUG00000021230 #13 ENSMAUG00000008507 #13 Slc5a9 (ENSMAUG00000016902) #15 ENSMAUG00000020229 ENSMAUG00000008748 #16 ENSMAUG00000004245 #16 ENSMAUG00000013879 ##16 Trabd2b (ENSMAUG00000006510) #17 ENSMAUG00000009858 Foxd2 (ENSMAUG00000010964) #18 Foxe3 (ENSMAUG00000010093) #19 ENSMAUG00000019205 Stil (ENSMAUG00000018720) #21 Tal1 (ENSMAUG00000001565) #22 Pdzk1ip1 (ENSMAUG00000019882) #23 Cyp4x1 (ENSMAUG00000011941) #25 ENSMAUG00000021832 Cyp4a30b (ENSMAUG00000010739) ENSMAUG00000021312 ENSMAUG00000011003 ENSMAUG00000018793 Cyp4b1 (ENSMAUG00000011868) #28 Efcab14 (ENSMAUG00000019992) #29 Tex38 (ENSMAUG00000013809) #30 Atpaf1 (ENSMAUG00000008609) #31 Mob3c (ENSMAUG00000003368) #33 ENSMAUG00000001517 Kncn (ENSMAUG00000017362) #35 Dmbx1 (ENSMAUG00000013192) Chinese hamster chok1gshd MODERN SPECIES 111 Elavl4 (ENSCGRG00001020348) #10 Bend5 (ENSCGRG00001018629) #11 Agbl4 (ENSCGRG00001017075) #12 Spata6 (ENSCGRG00001001168) #13 Slc5a9 (ENSCGRG00001019511) #15 ENSCGRG00001023213 ENSCGRG00001021660 #16 ENSCGRG00001021187 #16 ENSCGRG00001018354 ##16 Trabd2b (ENSCGRG00001016130) #17 ENSCGRG00001022727 Foxd2 (ENSCGRG00001010484) #18 Foxe3 (ENSCGRG00001005301) #19 Cmpk1 (ENSCGRG00001016283) #20 Stil (ENSCGRG00001012804) #21 Tal1 (ENSCGRG00001023671) #22 Pdzk1ip1 (ENSCGRG00001022750) #23 Cyp4x1 (ENSCGRG00001021846) #25 ENSCGRG00001019487 ENSCGRG00001009269 ENSCGRG00001023643 ENSCGRG00001018395 ENSCGRG00001013423 Cyp4b1 (ENSCGRG00001018150) #28 Efcab14 (ENSCGRG00001018066) #29 Tex38 (ENSCGRG00001013204) #30 Atpaf1 (ENSCGRG00001012405) #31 Mob3c (ENSCGRG00001011170) #33 ENSCGRG00001007744 Kncn (ENSCGRG00001024146) #35 Tmem275 (ENSCGRG00001003497) #36 Rodentia_A ANCESTRAL SPECIES ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b #12 ENSGT00390000001724 #11 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000164707 ENSGT00940000162562.A #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.f.a ENSGT00940000163570 ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000161237 Hystricomorpha ANCESTRAL SPECIES 4 ENSGT00730000110988 ENSGT00940000163721 ENSGT00390000000797 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b #12 ENSGT00390000001724 #11 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.f.a ENSGT00940000163570.a ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00940000155505.a ENSGT00940000161237 ENSGT00940000153665.b.a.b ENSGT00500000045816 Hystricomorpha_a ANCESTRAL SPECIES 1 ENSGT00730000110988 ENSGT00940000163721 ENSGT00390000000797 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b #12 ENSGT00390000001724 #11 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.f.a ENSGT00940000163570.a ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00940000155505.a ENSGT00940000161237 ENSGT00940000153665.b.a.b ENSGT00500000045816 Guinea pig MODERN SPECIES 187 ENSCPOG00000002481 #15 TRABD2B (ENSCPOG00000011762) #17 FOXD2 (ENSCPOG00000039211) #18 CMPK1 (ENSCPOG00000031837) #20 STIL (ENSCPOG00000003560) #21 TAL1 (ENSCPOG00000003558) #22 PDZK1IP1 (ENSCPOG00000037323) #23 CYP4X1 (ENSCPOG00000002997) #25 ENSCPOG00000011024 Hystricomorpha_b ANCESTRAL SPECIES 54 ENSGT00730000110988 ENSGT00940000163721 ENSGT00390000000797 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b #12 ENSGT00390000001724 #11 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000163540 ENSGT00940000160589.k #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000163570.a ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00940000155505.a ENSGT00940000161237 ENSGT00940000153665.b.a.b ENSGT00500000045816 ENSGT00390000003860 Long-tailed chinchilla MODERN SPECIES 171 EPS15 (ENSCLAG00000005042) TTC39A (ENSCLAG00000005328) ENSCLAG00000006939 C1orf185 (ENSCLAG00000007634) CDKN2C (ENSCLAG00000007763) FAF1 (ENSCLAG00000008153) DMRTA2 (ENSCLAG00000008314) #7 ELAVL4 (ENSCLAG00000005476) #10 AGBL4 (ENSCLAG00000006735) #12 BEND5 (ENSCLAG00000007168) #11 SPATA6 (ENSCLAG00000007504) #13 SLC5A9 (ENSCLAG00000007839) #15 TRABD2B (ENSCLAG00000005900) #17 ENSCLAG00000005985 STIL (ENSCLAG00000006217) #21 TAL1 (ENSCLAG00000006842) #22 PDZK1IP1 (ENSCLAG00000007015) #23 CYP4B1 (ENSCLAG00000007349) #28 ENSCLAG00000004484 ENSCLAG00000005036 ENSCLAG00000005609 EFCAB14 (ENSCLAG00000005792) #29 TEX38 (ENSCLAG00000006425) #30 ATPAF1 (ENSCLAG00000006456) #31 MOB3C (ENSCLAG00000006684) #33 MKNK1 (ENSCLAG00000003888) #34 ENSCLAG00000004751 KNCN (ENSCLAG00000004788) #35 DMBX1 (ENSCLAG00000004842) FAAH (ENSCLAG00000004917) NSUN4 (ENSCLAG00000005205) Degu MODERN SPECIES 148 DMRTA2 (ENSODEG00000006537) #7 ELAVL4 (ENSODEG00000006770) #10 ENSODEG00000007109 AGBL4 (ENSODEG00000009564) #12 ENSODEG00000019354 ENSODEG00000006988 BEND5 (ENSODEG00000007742) #11 SPATA6 (ENSODEG00000006382) #13 SLC5A9 (ENSODEG00000007740) #15 TRABD2B (ENSODEG00000007567) #17 ENSODEG00000008585 ENSODEG00000019646 ENSODEG00000006760 ENSODEG00000007423 #20 STIL (ENSODEG00000007478) #21 TAL1 (ENSODEG00000006602) #22 PDZK1IP1 (ENSODEG00000008906) #23 CYP4X1 (ENSODEG00000007165) #25 ENSODEG00000006889 ENSODEG00000019580 ENSODEG00000006838 CYP4B1 (ENSODEG00000010933) #28 ENSODEG00000007435 EFCAB14 (ENSODEG00000008413) #29 TEX38 (ENSODEG00000010166) #30 ATPAF1 (ENSODEG00000010525) #31 MOB3C (ENSODEG00000009151) #33 ENSODEG00000009653 #34 KNCN (ENSODEG00000007576) #35 DMBX1 (ENSODEG00000009303) ENSODEG00000012863 Naked mole-rat female MODERN SPECIES 26 ENSHGLG00000043536 ENSHGLG00000039566 ENSHGLG00000034647 #11 ENSHGLG00000011360 #11 SPATA6 (ENSHGLG00000014205) #13 ENSHGLG00000002670 SLC5A9 (ENSHGLG00000003161) #15 ENSHGLG00000037697 ENSHGLG00000010693 #17 ENSHGLG00000020805 ENSHGLG00000049793 FOXE3 (ENSHGLG00000034395) #19 ENSHGLG00000001416 STIL (ENSHGLG00000001713) #21 ENSHGLG00000001377 TAL1 (ENSHGLG00000047206) #22 PDZK1IP1 (ENSHGLG00000001653) #23 CYP4X1 (ENSHGLG00000002395) #25 ENSHGLG00000050738 ENSHGLG00000008660 #28 ENSHGLG00000036589 ENSHGLG00000003682 ENSHGLG00000001535 ENSHGLG00000044650 #28 ENSHGLG00000019567 EFCAB14 (ENSHGLG00000005336) #29 TEX38 (ENSHGLG00000004105) #30 ATPAF1 (ENSHGLG00000040111) #31 MOB3C (ENSHGLG00000032969) #33 MKNK1 (ENSHGLG00000032460) #34 KNCN (ENSHGLG00000042058) #35 Sciuridae ANCESTRAL SPECIES 3 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b #12 ENSGT00390000001724 #11 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000164707 ENSGT00940000162562.A.d #16 ENSGT00940000162562.A.c #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.f.a.a ENSGT00940000163570.c ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000161237 ENSGT00500000045816 Eurasian red squirrel MODERN SPECIES FAF1 (ENSSVLG00005014843) DMRTA2 (ENSSVLG00005014792) #7 ELAVL4 (ENSSVLG00005014154) #10 BEND5 (ENSSVLG00005013425) #11 AGBL4 (ENSSVLG00005013331) #12 SPATA6 (ENSSVLG00005013178) #13 SLC5A9 (ENSSVLG00005012665) #15 ENSSVLG00005012469 ENSSVLG00005012369 #16 ENSSVLG00005012317 ##16 TRABD2B (ENSSVLG00005012216) #17 FOXD2 (ENSSVLG00005012190) #18 FOXE3 (ENSSVLG00005012158) #19 ENSSVLG00005012034 #20 STIL (ENSSVLG00005011246) #21 TAL1 (ENSSVLG00005011145) #22 PDZK1IP1 (ENSSVLG00005011099) #23 CYP4X1 (ENSSVLG00005010957) #25 ENSSVLG00005010122 ENSSVLG00005009845 ENSSVLG00005008878 ENSSVLG00005008688 ENSSVLG00005008487 CYP4B1 (ENSSVLG00005008221) #28 ENSSVLG00005008165 EFCAB14 (ENSSVLG00005008138) #29 ATPAF1 (ENSSVLG00005008043) #31 MOB3C (ENSSVLG00005008013) #33 ENSSVLG00005007933 KNCN (ENSSVLG00005007856) #35 TMEM275 (ENSSVLG00005007823) #36 Marmotini ANCESTRAL SPECIES ENSGT00940000157399 #10 ENSGT00940000155042.b #12 ENSGT00390000001724 #11 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000164707.e.a ENSGT00940000162562.A.d #16 ENSGT00940000164707.e.b ENSGT00940000162562.A.c #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.f.a.a ENSGT00940000163570.d ENSGT00940000163570.c ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000161237 Alpin marmot MODERN SPECIES 15 ENSMMMG00000017613 ELAVL4 (ENSMMMG00000017637) #10 AGBL4 (ENSMMMG00000017802) #12 BEND5 (ENSMMMG00000017823) #11 ENSMMMG00000017834 #13 SLC5A9 (ENSMMMG00000017850) #15 ENSMMMG00000017885 ENSMMMG00000017897 #16 ENSMMMG00000017906 ENSMMMG00000017918 #16 ENSMMMG00000017939 ##16 TRABD2B (ENSMMMG00000017951) #17 FOXD2 (ENSMMMG00000017982) #18 CMPK1 (ENSMMMG00000017986) #20 STIL (ENSMMMG00000018013) #21 ENSMMMG00000018085 #22 PDZK1IP1 (ENSMMMG00000018092) #23 CYP4X1 (ENSMMMG00000018100) #25 ENSMMMG00000018152 ENSMMMG00000018214 ENSMMMG00000018225 ENSMMMG00000018229 CYP4B1 (ENSMMMG00000018250) #28 EFCAB14 (ENSMMMG00000018258) #29 ATPAF1 (ENSMMMG00000018290) #31 MOB3C (ENSMMMG00000018342) #33 ENSMMMG00000018347 KNCN (ENSMMMG00000018376) #35 TMEM275 (ENSMMMG00000018381) #36 DMBX1 (ENSMMMG00000018386) FAAH (ENSMMMG00000018402) Marmotini_b ANCESTRAL SPECIES ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b #12 ENSGT00390000001724 #11 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000164707.e.a ENSGT00940000162562.A.d #16 ENSGT00940000162562.A.c #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.f.a.a ENSGT00940000163570.d ENSGT00940000163570.c ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000161237 Squirrel MODERN SPECIES 74 BEND5 (ENSSTOG00000006997) #11 AGBL4 (ENSSTOG00000006972) #12 SPATA6 (ENSSTOG00000006944) #13 SLC5A9 (ENSSTOG00000006889) #15 ENSSTOG00000023325 #16 ENSSTOG00000024899 #16 ENSSTOG00000023168 TRABD2B (ENSSTOG00000028454) #17 FOXD2 (ENSSTOG00000027420) #18 FOXE3 (ENSSTOG00000033171) #19 CMPK1 (ENSSTOG00000007706) #20 STIL (ENSSTOG00000014333) #21 TAL1 (ENSSTOG00000008396) #22 PDZK1IP1 (ENSSTOG00000024038) #23 CYP4X1 (ENSSTOG00000013556) #25 ENSSTOG00000015913 ENSSTOG00000028206 ENSSTOG00000013550 CYP4B1 (ENSSTOG00000001409) #28 EFCAB14 (ENSSTOG00000016250) #29 ENSSTOG00000030628 #30 ATPAF1 (ENSSTOG00000005415) #31 MOB3C (ENSSTOG00000005399) #33 ENSSTOG00000032933 KNCN (ENSSTOG00000026559) #35 DMBX1 (ENSSTOG00000011661) FAAH (ENSSTOG00000011655) ENSSTOG00000033959 Arctic ground squirrel MODERN SPECIES 467 ENSUPAG00010015913 #13 SLC5A9 (ENSUPAG00010016240) #15 ENSUPAG00010016315 ENSUPAG00010016356 #16 ENSUPAG00010016396 #16 ENSUPAG00010016417 ##16 TRABD2B (ENSUPAG00010016431) #17 FOXD2 (ENSUPAG00010016448) #18 FOXE3 (ENSUPAG00010016452) #19 CMPK1 (ENSUPAG00010016469) #20 STIL (ENSUPAG00010016480) #21 TAL1 (ENSUPAG00010016605) #22 PDZK1IP1 (ENSUPAG00010016618) #23 CYP4X1 (ENSUPAG00010016640) #25 Laurasiatheria ANCESTRAL SPECIES ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00990000204587 #14 ENSGT00940000157546 #15 ENSGT00940000164707 ENSGT00940000162562.A #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173 ENSGT00940000163504 #24 ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316 ENSGT00940000161237 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00990000204587 #14 ENSGT00940000157546 #15 ENSGT00940000164707 ENSGT00940000162562.A #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173 ENSGT00940000161441.d #28 ENSGT00940000163504 #24 ENSGT00940000161441.c.b.a #28 ENSGT00940000161441.c.b.b #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a Artiodactyla ANCESTRAL SPECIES ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00990000204587 #14 ENSGT00940000157546 #15 ENSGT00940000164707 ENSGT00940000162562.A #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173 ENSGT00940000161441.d #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316 ENSGT00940000161237 ENSGT00500000045816 Suina ANCESTRAL SPECIES 27 ENSGT00730000110988 ENSGT00390000000797 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b.c #23 ENSGT00940000160927 #25 ENSGT00940000155173.g.a ENSGT00940000154660.b.d.b #23 ENSGT00940000155173.g.b ENSGT00940000161441.d #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316 Chacoan peccary MODERN SPECIES 54 RNF11 (ENSCWAG00000005303) C1orf185 (ENSCWAG00000005324) CDKN2C (ENSCWAG00000005386) FAF1 (ENSCWAG00000005411) DMRTA2 (ENSCWAG00000005466) #7 ELAVL4 (ENSCWAG00000005560) #10 AGBL4 (ENSCWAG00000006528) #12 BEND5 (ENSCWAG00000006694) #11 SPATA6 (ENSCWAG00000006748) #13 SLC5A9 (ENSCWAG00000006856) #15 TRABD2B (ENSCWAG00000007013) #17 FOXD2 (ENSCWAG00000007046) #18 FOXE3 (ENSCWAG00000007053) #19 CMPK1 (ENSCWAG00000007073) #20 STIL (ENSCWAG00000007144) #21 TAL1 (ENSCWAG00000007586) #22 ENSCWAG00000007601 #23 ENSCWAG00000007625 #25 ENSCWAG00000007685 #25 ENSCWAG00000007782 ENSCWAG00000007884 ENSCWAG00000008145 CYP4B1 (ENSCWAG00000008498) #28 EFCAB14 (ENSCWAG00000008901) #29 TEX38 (ENSCWAG00000008969) #30 ATPAF1 (ENSCWAG00000009076) #31 MOB3C (ENSCWAG00000009326) #33 MKNK1 (ENSCWAG00000009368) #34 KNCN (ENSCWAG00000009570) #35 DMBX1 (ENSCWAG00000009673) ENSCWAG00000009733 Pig MODERN SPECIES 14 FAF1 (ENSSSCG00000003877) ENSSSCG00000049732 DMRTA2 (ENSSSCG00000030552) #7 ELAVL4 (ENSSSCG00000037291) #10 ENSSSCG00000052381 ENSSSCG00000049367 BEND5 (ENSSSCG00000063412) #11 ENSSSCG00000031300 #12 SPATA6 (ENSSSCG00000003881) #13 SLC5A9 (ENSSSCG00000003882) #15 TRABD2B (ENSSSCG00000037318) #17 FOXD2 (ENSSSCG00000034880) #18 FOXE3 (ENSSSCG00000003884) #19 CMPK1 (ENSSSCG00000003885) #20 STIL (ENSSSCG00000003888) #21 TAL1 (ENSSSCG00000058056) #22 ENSSSCG00000020872 #23 ENSSSCG00000056639 ENSSSCG00000031778 #25 ENSSSCG00000024129 #25 ENSSSCG00000003892 CYP4A24 (ENSSSCG00000062158) ENSSSCG00000062325 ENSSSCG00000061684 ENSSSCG00000003889 ENSSSCG00000003891 CYP4A21 (ENSSSCG00000058165) CYP4B1 (ENSSSCG00000003894) #28 EFCAB14 (ENSSSCG00000003895) #29 TEX38 (ENSSSCG00000055453) #30 ATPAF1 (ENSSSCG00000038657) #31 Artiodactyla_a ANCESTRAL SPECIES ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00990000204587 #14 ENSGT00940000157546 #15 ENSGT00940000164707 ENSGT00940000162562.A #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173 ENSGT00940000161441.d #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316 ENSGT00940000161237 ENSGT00500000045816 Camelidae ANCESTRAL SPECIES 11 ENSGT00950000182917.a.b.a ENSGT00940000163721 ENSGT00390000000797 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00990000204587 #14 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000155173 ENSGT00940000160927 #25 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00940000155505.a ENSGT00940000161237 ENSGT00500000045816 ENSGT00940000153665.b.a.b ENSGT00390000003860 ENSGT00390000015908 Arabian camel MODERN SPECIES 4 EPS15 (ENSCDRG00005005246) TTC39A (ENSCDRG00005004896) C1orf185 (ENSCDRG00005004794) CDKN2C (ENSCDRG00005004767) FAF1 (ENSCDRG00005004702) DMRTA2 (ENSCDRG00005004641) #7 ELAVL4 (ENSCDRG00005004051) #10 BEND5 (ENSCDRG00005003960) #11 AGBL4 (ENSCDRG00005003837) #12 SPATA6 (ENSCDRG00005003747) #13 ENSCDRG00005003726 #14 SLC5A9 (ENSCDRG00005003621) #15 TRABD2B (ENSCDRG00005003535) #17 CMPK1 (ENSCDRG00005019485) #20 STIL (ENSCDRG00005019454) #21 TAL1 (ENSCDRG00005019418) #22 ENSCDRG00005019396 #23 ENSCDRG00005019371 CYP4X1 (ENSCDRG00005019322) #25 EFCAB14 (ENSCDRG00005019273) #29 TEX38 (ENSCDRG00005019244) #30 ATPAF1 (ENSCDRG00005019231) #31 MOB3C (ENSCDRG00005019211) #33 MKNK1 (ENSCDRG00005019138) #34 KNCN (ENSCDRG00005019056) #35 DMBX1 (ENSCDRG00005019026) FAAH (ENSCDRG00005019005) ENSCDRG00005018976 NSUN4 (ENSCDRG00005018950) ENSCDRG00005018916 LRRC41 (ENSCDRG00005018839) Alpaca MODERN SPECIES 1453 STIL (ENSVPAG00000004270) #21 ENSVPAG00000004268 #22 Artiodactyla_b ANCESTRAL SPECIES ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000164707 ENSGT00940000162562.A #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173 ENSGT00940000161441.d #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316 ENSGT00940000161237 ENSGT00500000045816 Cetacea ANCESTRAL SPECIES ENSGT00730000110988 ENSGT00390000000797 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000155173.j ENSGT00940000160927 #25 ENSGT00940000155173.i.a ENSGT00950000182958.a.b.b.j.l ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00940000155505.a ENSGT00940000161237 ENSGT00500000045816 ENSGT00940000153665.b.a.b Odontoceti ANCESTRAL SPECIES ENSGT00390000000797 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000155339.r ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000155173.i.a ENSGT00940000160927 #25 ENSGT00940000155173.j ENSGT00950000182958.a.b.b.j.l ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00940000155505.a ENSGT00940000161237 ENSGT00500000045816 ENSGT00940000153665.b.a.b Sperm whale MODERN SPECIES 15 CDKN2C (ENSPCTG00005012278) FAF1 (ENSPCTG00005012310) ENSPCTG00005012390 #12 ELAVL4 (ENSPCTG00005012489) #10 ENSPCTG00005013384 ENSPCTG00005013401 BEND5 (ENSPCTG00005013421) #11 AGBL4 (ENSPCTG00005013528) #12 SPATA6 (ENSPCTG00005013649) #13 SLC5A9 (ENSPCTG00005013780) #15 ENSPCTG00005014378 ENSPCTG00005014432 FOXE3 (ENSPCTG00005014461) #19 CMPK1 (ENSPCTG00005014484) #20 STIL (ENSPCTG00005014632) #21 TAL1 (ENSPCTG00005014754) #22 PDZK1IP1 (ENSPCTG00005014810) #23 ENSPCTG00005014892 ENSPCTG00005015607 CYP4B1 (ENSPCTG00005016063) #28 ENSPCTG00005016599 ENSPCTG00005016621 EFCAB14 (ENSPCTG00005016666) #29 TEX38 (ENSPCTG00005016811) #30 ATPAF1 (ENSPCTG00005016892) #31 MKNK1 (ENSPCTG00005017143) #34 KNCN (ENSPCTG00005017520) #35 ENSPCTG00005017654 LRRC41 (ENSPCTG00005017698) RAD54L (ENSPCTG00005017790) LURAP1 (ENSPCTG00005017847) Odontoceti_a ANCESTRAL SPECIES ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000155339.r ENSGT00940000161273 #17 ENSGT00940000153412.A.a.c.e.b ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000155173.i.a ENSGT00940000160927 #25 ENSGT00940000155173.j.a ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00940000155505.a ENSGT00940000161237 ENSGT00500000045816 ENSGT00940000153665.b.a.b ENSGT00390000003860.cb.a Odontoceti_b ANCESTRAL SPECIES ENSGT00390000000797 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000155339.r ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000155173.i.a ENSGT00940000163504 #24 ENSGT00940000161441.c.b.a #28 ENSGT00940000155173.i.b ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00940000155505.a ENSGT00940000161237 ENSGT00500000045816 ENSGT00940000153665.b.a.b Monodontidae ANCESTRAL SPECIES ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000155339.r ENSGT00940000161273 #17 ENSGT00940000153412.A.a.c.e.b ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000163504 #24 ENSGT00940000161441.c.b.a #28 ENSGT00940000155173.i.b ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00940000155505.a ENSGT00940000161237 ENSGT00500000045816 ENSGT00940000153665.b.a.b ENSGT00390000003860.cb.a Beluga whale MODERN SPECIES 74 ELAVL4 (ENSDLEG00000015258) #10 ENSDLEG00000015238 #12 ENSDLEG00000015227 BEND5 (ENSDLEG00000015199) #11 AGBL4 (ENSDLEG00000015168) #12 SPATA6 (ENSDLEG00000015119) #13 SLC5A9 (ENSDLEG00000015091) #15 ENSDLEG00000015073 ENSDLEG00000015069 TRABD2B (ENSDLEG00000015057) #17 ENSDLEG00000015052 FOXD2 (ENSDLEG00000015047) #18 FOXE3 (ENSDLEG00000015041) #19 CMPK1 (ENSDLEG00000014989) #20 STIL (ENSDLEG00000014810) #21 TAL1 (ENSDLEG00000014787) #22 PDZK1IP1 (ENSDLEG00000014775) #23 ENSDLEG00000014649 #28 ENSDLEG00000014626 #28 EFCAB14 (ENSDLEG00000014585) #29 TEX38 (ENSDLEG00000014565) #30 ATPAF1 (ENSDLEG00000014541) #31 MOB3C (ENSDLEG00000014521) #33 MKNK1 (ENSDLEG00000014496) #34 ENSDLEG00000014480 DMBX1 (ENSDLEG00000014468) FAAH (ENSDLEG00000014349) ENSDLEG00000014326 NSUN4 (ENSDLEG00000014317) ENSDLEG00000014305 LRRC41 (ENSDLEG00000014281) Narwhal MODERN SPECIES 304 FAF1 (ENSMMNG00015016261) DMRTA2 (ENSMMNG00015016305) #7 ELAVL4 (ENSMMNG00015016468) #10 AGBL4 (ENSMMNG00015016854) #12 ENSMMNG00015017042 BEND5 (ENSMMNG00015017067) #11 SPATA6 (ENSMMNG00015017114) #13 SLC5A9 (ENSMMNG00015017189) #15 ENSMMNG00015017223 TRABD2B (ENSMMNG00015017248) #17 ENSMMNG00015017274 FOXD2 (ENSMMNG00015017290) #18 FOXE3 (ENSMMNG00015017301) #19 CMPK1 (ENSMMNG00015017341) #20 STIL (ENSMMNG00015017497) #21 TAL1 (ENSMMNG00015017573) #22 PDZK1IP1 (ENSMMNG00015017600) #23 ENSMMNG00015017646 #24 ENSMMNG00015017692 #28 ENSMMNG00015017717 EFCAB14 (ENSMMNG00015017756) #29 TEX38 (ENSMMNG00015017799) #30 ATPAF1 (ENSMMNG00015017841) #31 MOB3C (ENSMMNG00015017953) #33 MKNK1 (ENSMMNG00015018022) #34 KNCN (ENSMMNG00015018209) #35 DMBX1 (ENSMMNG00015018243) FAAH (ENSMMNG00015018270) NSUN4 (ENSMMNG00015018308) ENSMMNG00015018332 LRRC41 (ENSMMNG00015018370) Vaquita MODERN SPECIES FAF1 (ENSPSNG00000010473) DMRTA2 (ENSPSNG00000010437) #7 ELAVL4 (ENSPSNG00000009710) #10 ENSPSNG00000009540 BEND5 (ENSPSNG00000009518) #11 AGBL4 (ENSPSNG00000009355) #12 SPATA6 (ENSPSNG00000009229) #13 SLC5A9 (ENSPSNG00000009041) #15 ENSPSNG00000008987 ENSPSNG00000008955 TRABD2B (ENSPSNG00000008890) #17 FOXD2 (ENSPSNG00000008853) #18 FOXE3 (ENSPSNG00000008840) #19 CMPK1 (ENSPSNG00000008760) #20 STIL (ENSPSNG00000008673) #21 TAL1 (ENSPSNG00000008617) #22 PDZK1IP1 (ENSPSNG00000008584) #23 ENSPSNG00000008499 ENSPSNG00000008408 ENSPSNG00000008156 ENSPSNG00000007825 EFCAB14 (ENSPSNG00000007725) #29 TEX38 (ENSPSNG00000007691) #30 ATPAF1 (ENSPSNG00000007541) #31 MOB3C (ENSPSNG00000007480) #33 MKNK1 (ENSPSNG00000007285) #34 KNCN (ENSPSNG00000007199) #35 DMBX1 (ENSPSNG00000007136) FAAH (ENSPSNG00000007076) NSUN4 (ENSPSNG00000006968) ENSPSNG00000006932 Dolphin MODERN SPECIES 4760 TAL1 (ENSTTRG00000011653) #22 PDZK1IP1 (ENSTTRG00000011654) #23 Blue whale MODERN SPECIES C1orf185 (ENSBMSG00010005668) CDKN2C (ENSBMSG00010005658) FAF1 (ENSBMSG00010005636) DMRTA2 (ENSBMSG00010005622) #7 ELAVL4 (ENSBMSG00010005482) #10 ENSBMSG00010005423 BEND5 (ENSBMSG00010005413) #11 AGBL4 (ENSBMSG00010005358) #12 SPATA6 (ENSBMSG00010005335) #13 SLC5A9 (ENSBMSG00010005258) #15 TRABD2B (ENSBMSG00010005224) #17 ENSBMSG00010005215 FOXE3 (ENSBMSG00010005194) #19 CMPK1 (ENSBMSG00010005177) #20 STIL (ENSBMSG00010005150) #21 TAL1 (ENSBMSG00010005132) #22 PDZK1IP1 (ENSBMSG00010005121) #23 ENSBMSG00010005054 ENSBMSG00010005028 #28 ENSBMSG00010005002 ENSBMSG00010004944 #28 ENSBMSG00010004923 ENSBMSG00010004918 EFCAB14 (ENSBMSG00010004906) #29 TEX38 (ENSBMSG00010004896) #30 ATPAF1 (ENSBMSG00010004876) #31 MOB3C (ENSBMSG00010004861) #33 MKNK1 (ENSBMSG00010004836) #34 KNCN (ENSBMSG00010004806) #35 DMBX1 (ENSBMSG00010004794) FAAH (ENSBMSG00010004779) Pecora ANCESTRAL SPECIES 2 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000164707 ENSGT00940000162562.A #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.k.b ENSGT00940000155173.k.a.a.b.a ENSGT00940000155173.k.a.a.b.b ENSGT00940000155173.k.a.a.a ENSGT00940000161441.d #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a Yarkand deer MODERN SPECIES 12 ENSCHYG00000020992 ELAVL4 (ENSCHYG00000021125) #10 AGBL4 (ENSCHYG00000021988) #12 ENSCHYG00000022139 BEND5 (ENSCHYG00000022182) #11 SPATA6 (ENSCHYG00000022292) #13 SLC5A9 (ENSCHYG00000022514) #15 ENSCHYG00000022669 ENSCHYG00000022715 #16 ENSCHYG00000022779 ##16 TRABD2B (ENSCHYG00000022894) #17 ENSCHYG00000022932 FOXD2 (ENSCHYG00000022949) #18 CMPK1 (ENSCHYG00000022970) #20 STIL (ENSCHYG00000023044) #21 TAL1 (ENSCHYG00000023140) #22 PDZK1IP1 (ENSCHYG00000023171) #23 CYP4X1 (ENSCHYG00000023196) #25 ENSCHYG00000023298 ENSCHYG00000023374 ENSCHYG00000023627 ENSCHYG00000023760 CYP4B1 (ENSCHYG00000024314) #28 EFCAB14 (ENSCHYG00000024392) #29 TEX38 (ENSCHYG00000024663) #30 MOB3C (ENSCHYG00000024692) #33 MKNK1 (ENSCHYG00000024738) #34 KNCN (ENSCHYG00000024910) #35 TMEM275 (ENSCHYG00000024933) #36 DMBX1 (ENSCHYG00000024937) ENSCHYG00000024986 Percora_a ANCESTRAL SPECIES 1 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000164707 ENSGT00940000162562.A #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.k.b ENSGT00940000155173.k.a.a.b.a ENSGT00940000155173.k.a.a.b.b ENSGT00940000155173.k.a.a.a ENSGT00940000161441.d #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a Siberian musk deer MODERN SPECIES 340 FAF1 (ENSMMSG00000012758) ENSMMSG00000012776 DMRTA2 (ENSMMSG00000012786) #7 ELAVL4 (ENSMMSG00000012846) #10 AGBL4 (ENSMMSG00000013891) #12 BEND5 (ENSMMSG00000013981) #11 SPATA6 (ENSMMSG00000014025) #13 SLC5A9 (ENSMMSG00000014113) #15 ENSMMSG00000014251 #16 ENSMMSG00000014278 ##16 TRABD2B (ENSMMSG00000014286) #17 FOXD2 (ENSMMSG00000014302) #18 FOXE3 (ENSMMSG00000014313) #19 ENSMMSG00000014328 #20 STIL (ENSMMSG00000014379) #21 TAL1 (ENSMMSG00000014528) #22 PDZK1IP1 (ENSMMSG00000014540) #23 CYP4X1 (ENSMMSG00000014557) #25 ENSMMSG00000014713 ENSMMSG00000017845 ENSMMSG00000017943 ENSMMSG00000018047 ENSMMSG00000018425 ENSMMSG00000018495 ENSMMSG00000018560 ENSMMSG00000018754 ENSMMSG00000018812 ENSMMSG00000018832 CYP4B1 (ENSMMSG00000018896) #28 EFCAB14 (ENSMMSG00000019009) #29 TEX38 (ENSMMSG00000019113) #30 Bovidae ANCESTRAL SPECIES 1 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000164707 ENSGT00940000162562.A #16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.k.b ENSGT00940000155173.k.a.a.b.a ENSGT00940000155173.k.a.a.b.b ENSGT00940000155173.k.a.a.a ENSGT00940000161441.d #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a Caprinae ANCESTRAL SPECIES 2 ENSGT00390000000797 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000162562.A #16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.k.b ENSGT00940000155173.k.a.a.b.a.d ENSGT00940000155173.k.a.a.b.a.c ENSGT00940000155173.k.a.a.b.b ENSGT00940000155173.k.a.a.a ENSGT00940000161441.d #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765.g #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 Rambouillet Sheep MODERN SPECIES FAF1 (ENSOARG00020003507) DMRTA2 (ENSOARG00020003462) #7 ENSOARG00020002841 ENSOARG00020002674 ENSOARG00020002635 ENSOARG00020002560 ENSOARG00020002510 SPATA6 (ENSOARG00020002472) #13 SLC5A9 (ENSOARG00020002431) #15 ENSOARG00020002415 #16 TRABD2B (ENSOARG00020002393) #17 FOXD2 (ENSOARG00020002380) #18 FOXE3 (ENSOARG00020002373) #19 CMPK1 (ENSOARG00020002350) #20 STIL (ENSOARG00020002323) #21 TAL1 (ENSOARG00020002312) #22 PDZK1IP1 (ENSOARG00020002299) #23 CYP4X1 (ENSOARG00020002290) #25 ENSOARG00020001814 ENSOARG00020001738 ENSOARG00020001546 ENSOARG00020001482 ENSOARG00020001350 CYP4B1 (ENSOARG00020001284) #28 EFCAB14 (ENSOARG00020001264) #29 TEX38 (ENSOARG00020001250) #30 ATPAF1 (ENSOARG00020001189) #31 MOB3C (ENSOARG00020001167) #33 MKNK1 (ENSOARG00020001122) #34 KNCN (ENSOARG00020001096) #35 TMEM275 (ENSOARG00020001085) #36 Goat MODERN SPECIES 22 CDKN2C (ENSCHIG00000018497) FAF1 (ENSCHIG00000023469) DMRTA2 (ENSCHIG00000014219) #7 ELAVL4 (ENSCHIG00000002038) #10 BEND5 (ENSCHIG00000021731) #11 ENSCHIG00000002488 #12 SPATA6 (ENSCHIG00000022098) #13 SLC5A9 (ENSCHIG00000008499) #15 ENSCHIG00000016345 #16 TRABD2B (ENSCHIG00000016346) #17 ENSCHIG00000008212 FOXD2 (ENSCHIG00000000964) #18 FOXE3 (ENSCHIG00000005171) #19 CMPK1 (ENSCHIG00000009857) #20 STIL (ENSCHIG00000018306) #21 TAL1 (ENSCHIG00000023704) #22 PDZK1IP1 (ENSCHIG00000010100) #23 CYP4X1 (ENSCHIG00000017002) #25 CYP4A42 (ENSCHIG00000025289) ENSCHIG00000022081 ENSCHIG00000002358 ENSCHIG00000017193 CYP4A41 (ENSCHIG00000013010) ENSCHIG00000008252 ENSCHIG00000006577 CYP4B1 (ENSCHIG00000010220) #28 EFCAB14 (ENSCHIG00000021934) #29 TEX38 (ENSCHIG00000019654) #30 ENSCHIG00000024752 #31 MOB3C (ENSCHIG00000017303) #33 MKNK1 (ENSCHIG00000025017) #34 Bovinae ANCESTRAL SPECIES 1 ENSGT00940000154831.q.a ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000153095.g.b.b.d.b ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000164707 ENSGT00940000162562.A #16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.k.a.a.b.a ENSGT00940000155173.k.a.a.a ENSGT00940000161441.d #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316 ENSGT00940000161237 Bos ANCESTRAL SPECIES ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000153095.g.b.b.d.b ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT01100000263480.a.b.b.a.b.b.b.a.a.a.b ENSGT00940000157546 #15 ENSGT00940000164707 ENSGT00940000162562.A #16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.k.a.a.b.a.b ENSGT00940000155173.k.a.a.a ENSGT00940000161441.d #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316 ENSGT00940000161237 Bos_b ANCESTRAL SPECIES 1 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000153095.g.b.b.d.b ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT01100000263480.a.b.b.a.b.b.b.a.a.a.b ENSGT00940000157546 #15 ENSGT00940000164707 ENSGT00940000162562.A #16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.k.a.a.b.a.b ENSGT00940000155173.k.a.a.b.a.a ENSGT00940000155173.k.a.a.a ENSGT00940000161441.d #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316 Cow MODERN SPECIES 22 DMRTA2 (ENSBTAG00000010414) #7 ELAVL4 (ENSBTAG00000021046) #10 ENSBTAG00000054981 #12 ENSBTAG00000053607 BEND5 (ENSBTAG00000009209) #11 ENSBTAG00000012722 #12 SPATA6 (ENSBTAG00000003128) #13 SLC5A9 (ENSBTAG00000014225) #15 ENSBTAG00000054583 SKINT1 (ENSBTAG00000009192) #16 TRABD2B (ENSBTAG00000054324) #17 FOXD2 (ENSBTAG00000045643) #18 FOXE3 (ENSBTAG00000051575) #19 CMPK1 (ENSBTAG00000019956) #20 STIL (ENSBTAG00000017844) #21 TAL1 (ENSBTAG00000005029) #22 PDZK1IP1 (ENSBTAG00000002555) #23 CYP4X1 (ENSBTAG00000015647) #25 CYP4A11 (ENSBTAG00000037890) CYP4A59 (ENSBTAG00000000229) CYP4A22 (ENSBTAG00000013481) ENSBTAG00000050746 CYP4B1 (ENSBTAG00000011976) #28 EFCAB14 (ENSBTAG00000000097) #29 TEX38 (ENSBTAG00000046812) #30 ATPAF1 (ENSBTAG00000000094) #31 MOB3C (ENSBTAG00000023551) #33 MKNK1 (ENSBTAG00000019933) #34 KNCN (ENSBTAG00000030532) #35 TMEM275 (ENSBTAG00000053814) #36 DMBX1 (ENSBTAG00000009625) Hybrid Bos Indicus MODERN SPECIES 22 ENSBIXG00005013142 DMRTA2 (ENSBIXG00005013129) #7 ENSBIXG00005013121 ELAVL4 (ENSBIXG00005013087) #10 AGBL4 (ENSBIXG00005012945) #12 ENSBIXG00005001430 BEND5 (ENSBIXG00005012833) #11 SPATA6 (ENSBIXG00005012777) #13 ENSBIXG00005012739 SLC5A9 (ENSBIXG00005012722) #15 ENSBIXG00005012658 #16 TRABD2B (ENSBIXG00005012610) #17 FOXE3 (ENSBIXG00005012567) #19 CMPK1 (ENSBIXG00005012554) #20 STIL (ENSBIXG00005001365) #21 TAL1 (ENSBIXG00005001347) #22 PDZK1IP1 (ENSBIXG00005012472) #23 CYP4X1 (ENSBIXG00005012436) #25 ENSBIXG00005012345 CYP4B1 (ENSBIXG00005001270) #28 EFCAB14 (ENSBIXG00005012188) #29 TEX38 (ENSBIXG00005012152) #30 ATPAF1 (ENSBIXG00005012121) #31 MOB3C (ENSBIXG00005001231) #33 MKNK1 (ENSBIXG00005006328) #34 KNCN (ENSBIXG00005011880) #35 TMEM275 (ENSBIXG00005001181) #36 DMBX1 (ENSBIXG00005011839) ENSBIXG00005011831 FAAH (ENSBIXG00005011771) NSUN4 (ENSBIXG00005011707) Bos_a ANCESTRAL SPECIES 1 ENSGT01100000263481.n.a.b.a.b.a.a.a.a.a.b.a ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00990000203553.c.a.a.a.b ENSGT00940000155042.b #12 ENSGT00390000001724 #11 ENSGT00530000063821.b.a #13 ENSGT01100000263480.a.b.b.a.b.b.b.a.a.a.b ENSGT00940000157546 #15 ENSGT00940000164707 ENSGT00940000162562.A #16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.k.a.a.b.a.b ENSGT00940000155173.k.a.a.a ENSGT00940000161441.d #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316 ENSGT00940000161237 Wild yak MODERN SPECIES 2141 ENSBMUG00000022555 #16 TRABD2B (ENSBMUG00000022534) #17 ENSBMUG00000022515 STIL (ENSBMUG00000022489) #21 ENSBMUG00000022445 #22 PDZK1IP1 (ENSBMUG00000022430) #23 Domestic yak MODERN SPECIES 22 ENSBGRG00000008184 DMRTA2 (ENSBGRG00000008234) #7 ENSBGRG00000008263 ELAVL4 (ENSBGRG00000008303) #10 BEND5 (ENSBGRG00000000244) #11 ENSBGRG00000000329 SPATA6 (ENSBGRG00000000361) #13 ENSBGRG00000000443 SLC5A9 (ENSBGRG00000000471) #15 ENSBGRG00000000634 ENSBGRG00000000659 #16 TRABD2B (ENSBGRG00000000715) #17 FOXD2 (ENSBGRG00000000734) #18 CMPK1 (ENSBGRG00000000768) #20 STIL (ENSBGRG00000000847) #21 TAL1 (ENSBGRG00000000873) #22 PDZK1IP1 (ENSBGRG00000000884) #23 CYP4X1 (ENSBGRG00000000906) #25 ENSBGRG00000000946 ENSBGRG00000000995 ENSBGRG00000001400 CYP4B1 (ENSBGRG00000001457) #28 EFCAB14 (ENSBGRG00000001550) #29 TEX38 (ENSBGRG00000001576) #30 ATPAF1 (ENSBGRG00000001598) #31 MOB3C (ENSBGRG00000001707) #33 MKNK1 (ENSBGRG00000001742) #34 KNCN (ENSBGRG00000001814) #35 TMEM275 (ENSBGRG00000001830) #36 DMBX1 (ENSBGRG00000001838) ENSBGRG00000001876 American bison MODERN SPECIES 2971 CDKN2C (ENSBBBG00000009704) FAF1 (ENSBBBG00000009713) ELAVL4 (ENSBBBG00000009727) #10 ENSBBBG00000001599 BEND5 (ENSBBBG00000009734) #11 AGBL4 (ENSBBBG00000009737) #12 SPATA6 (ENSBBBG00000009751) #13 SLC5A9 (ENSBBBG00000009762) #15 ENSBBBG00000009039 #16 ENSBBBG00000009765 ENSBBBG00000009768 ##16 TRABD2B (ENSBBBG00000009775) #17 CMPK1 (ENSBBBG00000009782) #20 STIL (ENSBBBG00000001632) #21 ENSBBBG00000001633 #22 PDZK1IP1 (ENSBBBG00000009801) #23 ENSBBBG00000009802 CYP4X1 (ENSBBBG00000008137) #25 ENSBBBG00000007113 ENSBBBG00000009830 CYP4B1 (ENSBBBG00000009841) #28 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00990000204587 #14 ENSGT00940000157546 #15 ENSGT00940000164707 ENSGT00940000162562.A #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173 ENSGT00940000161441.d #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316 ENSGT00940000161237 ENSGT00940000153665.b.a.b Laurasiatheria_c ANCESTRAL SPECIES ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00990000204587 #14 ENSGT00940000157546 #15 ENSGT00940000164707 ENSGT00940000162562.A #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173 ENSGT00940000161441.d #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316 ENSGT00940000161237 ENSGT00940000153665.b.a.b Chiroptera ANCESTRAL SPECIES ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00990000204587 #14 ENSGT00940000157546 #15 ENSGT00940000164707 ENSGT00940000162562.A #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173 ENSGT00940000161441.d #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00940000155505.a ENSGT00940000163316 ENSGT00940000161237 ENSGT00940000153665.b.a.b ENSGT00390000003860 Microchiroptera ANCESTRAL SPECIES 1 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00990000204587 #14 ENSGT00940000157546 #15 ENSGT00940000164707 ENSGT00940000162562.A #16 ENSGT00940000162562.B ##16 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173 ENSGT00940000161441.d #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00940000155505.a ENSGT00940000163316 ENSGT00940000161237 ENSGT00940000153665.b.a.b ENSGT00390000003860 Greater horseshoe bat MODERN SPECIES 27 BEND5 (ENSRFEG00010002514) #11 AGBL4 (ENSRFEG00010002410) #12 SPATA6 (ENSRFEG00010002287) #13 ENSRFEG00010002251 #14 SLC5A9 (ENSRFEG00010002222) #15 ENSRFEG00010002204 ENSRFEG00010002180 #16 ENSRFEG00010002154 ##16 ENSRFEG00010002138 TRABD2B (ENSRFEG00010002104) #17 FOXD2 (ENSRFEG00010002087) #18 FOXE3 (ENSRFEG00010002079) #19 CMPK1 (ENSRFEG00010002044) #20 ENSRFEG00010002024 STIL (ENSRFEG00010001982) #21 TAL1 (ENSRFEG00010001940) #22 PDZK1IP1 (ENSRFEG00010001905) #23 CYP4X1 (ENSRFEG00010001881) #25 ENSRFEG00010001800 CYP4B1 (ENSRFEG00010001687) #28 EFCAB14 (ENSRFEG00010001530) #29 TEX38 (ENSRFEG00010001488) #30 ATPAF1 (ENSRFEG00010001372) #31 MOB3C (ENSRFEG00010001306) #33 MKNK1 (ENSRFEG00010001258) #34 KNCN (ENSRFEG00010001190) #35 DMBX1 (ENSRFEG00010001145) FAAH (ENSRFEG00010001067) NSUN4 (ENSRFEG00010001014) ENSRFEG00010000998 LRRC41 (ENSRFEG00010000955) Microbat MODERN SPECIES 974 TTC39A (ENSMLUG00000004443) ENSMLUG00000004439 C1orf185 (ENSMLUG00000023716) CDKN2C (ENSMLUG00000006627) FAF1 (ENSMLUG00000006252) DMRTA2 (ENSMLUG00000006249) #7 ELAVL4 (ENSMLUG00000006226) #10 BEND5 (ENSMLUG00000016578) #11 ENSMLUG00000016567 #12 SPATA6 (ENSMLUG00000011417) #13 SLC5A9 (ENSMLUG00000010198) #15 ENSMLUG00000024145 #16 ENSMLUG00000022445 ##16 TRABD2B (ENSMLUG00000010918) #17 STIL (ENSMLUG00000006395) #21 TAL1 (ENSMLUG00000006388) #22 PDZK1IP1 (ENSMLUG00000006083) #23 CYP4X1 (ENSMLUG00000011781) #25 ENSMLUG00000002780 ENSMLUG00000025621 #28 ENSMLUG00000024150 CYP4B1 (ENSMLUG00000002776) #28 ENSMLUG00000014593 #29 TEX38 (ENSMLUG00000029002) #30 ATPAF1 (ENSMLUG00000007861) #31 MOB3C (ENSMLUG00000007841) #33 MKNK1 (ENSMLUG00000007816) #34 KNCN (ENSMLUG00000028209) #35 DMBX1 (ENSMLUG00000005458) ENSMLUG00000023470 FAAH (ENSMLUG00000005452) Megabat MODERN SPECIES 1728 CMPK1 (ENSPVAG00000005354) #20 STIL (ENSPVAG00000005352) #21 TAL1 (ENSPVAG00000005351) #22 PDZK1IP1 (ENSPVAG00000005350) #23 Equus ANCESTRAL SPECIES 2 ENSGT00950000182917.a.b.a ENSGT00730000110988 ENSGT00390000000797 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b #12 ENSGT00390000001724 #11 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.q.b ENSGT00940000155173.q.a.b ENSGT00940000161441.c.b.a #28 ENSGT00940000155173.q.a.a ENSGT00940000161441.c.a.a #28 ENSGT00940000155173.r ENSGT00940000163504 #24 ENSGT00940000161441.c.a.b #28 ENSGT00940000161441.c.b.b #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 Horse MODERN SPECIES 11 C2H1orf185 (ENSECAG00000025041) CDKN2C (ENSECAG00000004817) FAF1 (ENSECAG00000008495) ENSECAG00000044105 DMRTA2 (ENSECAG00000029061) #7 ELAVL4 (ENSECAG00000022284) #10 ENSECAG00000059132 #12 BEND5 (ENSECAG00000051417) #11 ENSECAG00000055301 #12 SPATA6 (ENSECAG00000000158) #13 SLC5A9 (ENSECAG00000011684) #15 TRABD2B (ENSECAG00000022697) #17 FOXE3 (ENSECAG00000049916) #19 CMPK1 (ENSECAG00000000428) #20 STIL (ENSECAG00000011152) #21 TAL1 (ENSECAG00000018746) #22 CYP4X1 (ENSECAG00000020100) #25 ENSECAG00000033081 #28 ENSECAG00000027949 ENSECAG00000045102 ENSECAG00000046409 ENSECAG00000036794 ENSECAG00000048848 #28 ENSECAG00000028078 ENSECAG00000024521 #28 ENSECAG00000054636 #28 ENSECAG00000044983 #28 EFCAB14 (ENSECAG00000008976) #29 TEX38 (ENSECAG00000017700) #30 ATPAF1 (ENSECAG00000018487) #31 MKNK1 (ENSECAG00000000735) #34 Donkey MODERN SPECIES 25 EPS15 (ENSEASG00005010751) TTC39A (ENSEASG00005010736) RNF11 (ENSEASG00005037659) C1orf185 (ENSEASG00005037128) CDKN2C (ENSEASG00005010733) FAF1 (ENSEASG00005010732) DMRTA2 (ENSEASG00005037248) #7 ELAVL4 (ENSEASG00005010728) #10 BEND5 (ENSEASG00005010723) #11 AGBL4 (ENSEASG00005010721) #12 SPATA6 (ENSEASG00005010718) #13 SLC5A9 (ENSEASG00005010710) #15 TRABD2B (ENSEASG00005010700) #17 CMPK1 (ENSEASG00005010695) #20 STIL (ENSEASG00005010657) #21 ENSEASG00005038126 #22 ENSEASG00005023820 #23 ENSEASG00005034479 ENSEASG00005010647 #25 ENSEASG00005010640 ENSEASG00005010633 ENSEASG00005014485 ENSEASG00005010169 ENSEASG00005037264 #28 ENSEASG00005010627 ENSEASG00005024025 #24 ENSEASG00005010120 #28 ENSEASG00005031595 #28 EFCAB14 (ENSEASG00005004930) #29 TEX38 (ENSEASG00005030988) #30 ATPAF1 (ENSEASG00005004914) #31 Carnivora ANCESTRAL SPECIES 1 ENSGT00730000110988 ENSGT00390000000797 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.m ENSGT00940000161441.d #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316 ENSGT00940000161237 ENSGT00940000153665.b.a.b Felidae ANCESTRAL SPECIES 10 ENSGT00730000110988 ENSGT00390000000797 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.m.a.b ENSGT00940000155173.m.a.a ENSGT00940000155173.m.b ENSGT00940000161441.d #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000161237 Panthera ANCESTRAL SPECIES 4 ENSGT00390000000797 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00950000182922.a.a.a.b.a.b.a.a.c.a.a ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.m.a.b ENSGT00940000155173.m.a.a ENSGT00940000155173.m.b ENSGT00940000161441.d #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00940000154587.a.a ENSGT00390000008086 #36 ENSGT00940000155505.a Tiger MODERN SPECIES 100 TTC39A (ENSPTIG00000006822) RNF11 (ENSPTIG00000012147) C1orf185 (ENSPTIG00000012429) CDKN2C (ENSPTIG00000013155) FAF1 (ENSPTIG00000014264) ELAVL4 (ENSPTIG00000016727) #10 ENSPTIG00000019852 #12 ENSPTIG00000005063 BEND5 (ENSPTIG00000020902) #11 AGBL4 (ENSPTIG00000021182) #12 SPATA6 (ENSPTIG00000021470) #13 SLC5A9 (ENSPTIG00000007011) #15 TRABD2B (ENSPTIG00000009870) #17 CMPK1 (ENSPTIG00000011122) #20 STIL (ENSPTIG00000011691) #21 TAL1 (ENSPTIG00000017616) #22 PDZK1IP1 (ENSPTIG00000018010) #23 CYP4X1 (ENSPTIG00000018303) #25 CYP4A37 (ENSPTIG00000018827) CYP4A106 (ENSPTIG00000020491) ENSPTIG00000020880 CYP4B1 (ENSPTIG00000021254) #28 EFCAB14 (ENSPTIG00000021900) #29 TEX38 (ENSPTIG00000021969) #30 ATPAF1 (ENSPTIG00000022016) #31 MOB3C (ENSPTIG00000002465) #33 MKNK1 (ENSPTIG00000004539) #34 KNCN (ENSPTIG00000005487) #35 DMBX1 (ENSPTIG00000006229) FAAH (ENSPTIG00000006853) NSUN4 (ENSPTIG00000007969) Panthera_a ANCESTRAL SPECIES 11 ENSGT00390000000797 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00950000182922.a.a.a.b.a.b.a.a.c.a.a ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.m.a.b ENSGT00940000155173.m.a.a ENSGT00940000155173.m.b ENSGT00940000161441.d #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a lion MODERN SPECIES 8 CDKN2C (ENSPLOG00000005297) FAF1 (ENSPLOG00000005328) ENSPLOG00000005409 DMRTA2 (ENSPLOG00000005423) #7 ENSPLOG00000005447 ELAVL4 (ENSPLOG00000005634) #10 AGBL4 (ENSPLOG00000006006) #12 BEND5 (ENSPLOG00000006114) #11 SPATA6 (ENSPLOG00000006148) #13 SLC5A9 (ENSPLOG00000006218) #15 TRABD2B (ENSPLOG00000006352) #17 FOXD2 (ENSPLOG00000006398) #18 FOXE3 (ENSPLOG00000006409) #19 CMPK1 (ENSPLOG00000006430) #20 STIL (ENSPLOG00000006499) #21 TAL1 (ENSPLOG00000006549) #22 PDZK1IP1 (ENSPLOG00000006576) #23 CYP4X1 (ENSPLOG00000006599) #25 ENSPLOG00000006700 ENSPLOG00000006991 ENSPLOG00000007060 ENSPLOG00000007122 #28 EFCAB14 (ENSPLOG00000007158) #29 TEX38 (ENSPLOG00000007261) #30 ATPAF1 (ENSPLOG00000007299) #31 MOB3C (ENSPLOG00000007361) #33 ENSPLOG00000007396 TMEM275 (ENSPLOG00000007493) #36 DMBX1 (ENSPLOG00000007507) FAAH (ENSPLOG00000007532) NSUN4 (ENSPLOG00000007546) leopard MODERN SPECIES 16 CDKN2C (ENSPPRG00000005623) FAF1 (ENSPPRG00000005301) DMRTA2 (ENSPPRG00000003651) #7 ELAVL4 (ENSPPRG00000002764) #10 ENSPPRG00000001721 #12 ENSPPRG00000017680 BEND5 (ENSPPRG00000022625) #11 AGBL4 (ENSPPRG00000022863) #12 SPATA6 (ENSPPRG00000023213) #13 SLC5A9 (ENSPPRG00000020008) #15 TRABD2B (ENSPPRG00000013314) #17 FOXD2 (ENSPPRG00000017402) #18 FOXE3 (ENSPPRG00000012774) #19 ENSPPRG00000012334 #20 STIL (ENSPPRG00000010998) #21 TAL1 (ENSPPRG00000008561) #22 PDZK1IP1 (ENSPPRG00000008341) #23 CYP4X1 (ENSPPRG00000008167) #25 CYP4A37 (ENSPPRG00000007723) CYP4A106 (ENSPPRG00000005233) ENSPPRG00000004202 CYP4B1 (ENSPPRG00000022661) #28 EFCAB14 (ENSPPRG00000023530) #29 TEX38 (ENSPPRG00000023945) #30 ATPAF1 (ENSPPRG00000024212) #31 MOB3C (ENSPPRG00000020894) #33 MKNK1 (ENSPPRG00000019784) #34 KNCN (ENSPPRG00000016007) #35 TMEM275 (ENSPPRG00000016874) #36 DMBX1 (ENSPPRG00000014020) FAAH (ENSPPRG00000013369) Cat MODERN SPECIES 239 CC1H1orf185 (ENSFCAG00000043741) CDKN2C (ENSFCAG00000033306) ENSFCAG00000028644 FAF1 (ENSFCAG00000011327) DMRTA2 (ENSFCAG00000045950) #7 ELAVL4 (ENSFCAG00000010438) #10 ENSFCAG00000022016 AGBL4 (ENSFCAG00000000550) #12 SPATA6 (ENSFCAG00000029729) #13 SLC5A9 (ENSFCAG00000000548) #15 TRABD2B (ENSFCAG00000000546) #17 FOXD2 (ENSFCAG00000044804) #18 FOXE3 (ENSFCAG00000046511) #19 CMPK1 (ENSFCAG00000025426) #20 STIL (ENSFCAG00000012141) #21 TAL1 (ENSFCAG00000045414) #22 PDZK1IP1 (ENSFCAG00000019308) #23 CYP4X1 (ENSFCAG00000007168) #25 CYP4A37 (ENSFCAG00000040744) ENSFCAG00000037991 ENSFCAG00000038068 CYP4B1 (ENSFCAG00000002762) #28 EFCAB14 (ENSFCAG00000004536) #29 TEX38 (ENSFCAG00000004534) #30 ATPAF1 (ENSFCAG00000024832) #31 MOB3C (ENSFCAG00000008001) #33 MKNK1 (ENSFCAG00000007999) #34 KNCN (ENSFCAG00000040114) #35 TMEM275 (ENSFCAG00000045074) #36 DMBX1 (ENSFCAG00000011876) FAAH (ENSFCAG00000003454) Caniformia ANCESTRAL SPECIES 2 ENSGT00730000110988 ENSGT00390000000797 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.m ENSGT00940000161441.d #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316 ENSGT00940000161237 ENSGT00500000045816 Caniformia_b ANCESTRAL SPECIES 1 ENSGT00950000182917.a.b.a ENSGT00730000110988 ENSGT00390000000797 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.m ENSGT00940000161441.d #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316 ENSGT00940000161237 ENSGT00500000045816 Ursidae ANCESTRAL SPECIES ENSGT00730000110988 ENSGT00390000000797 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT01010000229967 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546.h #15 ENSGT00940000157546.g #15 ENSGT00940000161273 #17 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.m ENSGT00940000161441.d #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00940000155505.a ENSGT00940000163316 ENSGT00940000161237 ENSGT00940000153665.b.a.b ENSGT00390000003860 Giant Panda MODERN SPECIES 11 RNF11 (ENSAMEG00000017484) C1orf185 (ENSAMEG00000024320) CDKN2C (ENSAMEG00000028782) ENSAMEG00000031167 FAF1 (ENSAMEG00000017472) DMRTA2 (ENSAMEG00000026233) #7 ENSAMEG00000029933 ELAVL4 (ENSAMEG00000017455) #10 BEND5 (ENSAMEG00000009379) #11 AGBL4 (ENSAMEG00000009391) #12 SPATA6 (ENSAMEG00000008559) #13 SLC5A9 (ENSAMEG00000008581) #15 TRABD2B (ENSAMEG00000018869) #17 CMPK1 (ENSAMEG00000000012) #20 STIL (ENSAMEG00000000013) #21 TAL1 (ENSAMEG00000029725) #22 PDZK1IP1 (ENSAMEG00000024007) #23 CYP4X1 (ENSAMEG00000000016) #25 ENSAMEG00000029837 CYP4B1 (ENSAMEG00000014075) #28 EFCAB14 (ENSAMEG00000014050) #29 TEX38 (ENSAMEG00000020215) #30 ENSAMEG00000025041 #32 ENSAMEG00000014047 #31 MKNK1 (ENSAMEG00000014008) #34 KNCN (ENSAMEG00000014006) #35 DMBX1 (ENSAMEG00000014000) FAAH (ENSAMEG00000013963) NSUN4 (ENSAMEG00000013949) ENSAMEG00000027666 LRRC41 (ENSAMEG00000027944) Ursus ANCESTRAL SPECIES ENSGT00940000159889 #22 American black bear MODERN SPECIES 7526 ENSUAMG00000008606 #22 Mustelinae ANCESTRAL SPECIES ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.m.d ENSGT00940000155173.m.c.b ENSGT00940000155173.m.c.a.b ENSGT00940000155173.m.c.a.a.a ENSGT00940000161441.d #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a American mink MODERN SPECIES 344 BEND5 (ENSNVIG00000002432) #11 ENSNVIG00000002411 #12 SPATA6 (ENSNVIG00000002346) #13 SLC5A9 (ENSNVIG00000002273) #15 TRABD2B (ENSNVIG00000002254) #17 FOXD2 (ENSNVIG00000002242) #18 CMPK1 (ENSNVIG00000002204) #20 STIL (ENSNVIG00000002103) #21 TAL1 (ENSNVIG00000002084) #22 PDZK1IP1 (ENSNVIG00000002077) #23 CYP4X1 (ENSNVIG00000002045) #25 ENSNVIG00000002014 ENSNVIG00000001905 Ferret MODERN SPECIES 167 ENSMPUG00000012350 #12 BEND5 (ENSMPUG00000012351) #11 AGBL4 (ENSMPUG00000012352) #12 SPATA6 (ENSMPUG00000012355) #13 SLC5A9 (ENSMPUG00000012383) #15 TRABD2B (ENSMPUG00000012386) #17 ENSMPUG00000012391 CMPK1 (ENSMPUG00000012394) #20 STIL (ENSMPUG00000012399) #21 TAL1 (ENSMPUG00000012410) #22 PDZK1IP1 (ENSMPUG00000012421) #23 CYP4X1 (ENSMPUG00000012436) #25 ENSMPUG00000012443 ENSMPUG00000012510 ENSMPUG00000012515 ENSMPUG00000012694 CYP4B1 (ENSMPUG00000012724) #28 EFCAB14 (ENSMPUG00000012730) #29 TEX38 (ENSMPUG00000018579) #30 ATPAF1 (ENSMPUG00000012737) #31 MOB3C (ENSMPUG00000012768) #33 MKNK1 (ENSMPUG00000012773) #34 KNCN (ENSMPUG00000012774) #35 ENSMPUG00000012777 DMBX1 (ENSMPUG00000012779) Canidae ANCESTRAL SPECIES 12 ENSGT00730000110988 ENSGT00390000000797 ENSGT00940000160194 ENSGT00940000154831.db.a ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.m.e.a.b ENSGT00940000155173.m.e.a.a ENSGT00940000155173.n ENSGT00940000155173.m.f ENSGT00940000161441.d #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00940000155505.a ENSGT00940000163316 Canis_lupus ANCESTRAL SPECIES 16 ENSGT00730000110988 ENSGT00390000000797 ENSGT00940000160194 ENSGT00940000154831.db.a ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163987 #19 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173.m.e.a.b ENSGT00940000155173.m.e.a.a ENSGT00940000155173.m.f ENSGT00940000161441.d #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00940000155505.a ENSGT00940000163316 ENSGT00940000161237 Dingo MODERN SPECIES 344 ENSCAFG00020013515 ENSCAFG00020013544 ENSCAFG00020013547 DMRTA2 (ENSCAFG00020013554) #7 ELAVL4 (ENSCAFG00020013581) #10 BEND5 (ENSCAFG00020014470) #11 ENSCAFG00020014471 #12 ENSCAFG00020014472 #12 SPATA6 (ENSCAFG00020014474) #13 SLC5A9 (ENSCAFG00020014477) #15 TRABD2B (ENSCAFG00020014503) #17 FOXD2 (ENSCAFG00020014506) #18 FOXE3 (ENSCAFG00020014507) #19 CMPK1 (ENSCAFG00020014509) #20 STIL (ENSCAFG00020014512) #21 TAL1 (ENSCAFG00020014522) #22 PDZK1IP1 (ENSCAFG00020014525) #23 CYP4X1 (ENSCAFG00020014528) #25 ENSCAFG00020014556 ENSCAFG00020014560 ENSCAFG00020014722 ENSCAFG00020014728 CYP4B1 (ENSCAFG00020014733) #28 ENSCAFG00020014748 #29 ENSCAFG00020014750 #29 TEX38 (ENSCAFG00020014751) #30 ATPAF1 (ENSCAFG00020014753) #31 MOB3C (ENSCAFG00020014764) #33 MKNK1 (ENSCAFG00020014775) #34 KNCN (ENSCAFG00020015014) #35 ENSCAFG00020015017 Dog MODERN SPECIES 6 RNF11 (ENSCAFG00845024230) C1orf185 (ENSCAFG00845024301) CDKN2C (ENSCAFG00845024510) FAF1 (ENSCAFG00845024609) ENSCAFG00845024999 DMRTA2 (ENSCAFG00845025044) #7 ELAVL4 (ENSCAFG00845025265) #10 AGBL4 (ENSCAFG00845025876) #11 SPATA6 (ENSCAFG00845026650) #13 SLC5A9 (ENSCAFG00845026902) #15 TRABD2B (ENSCAFG00845027015) #17 FOXD2 (ENSCAFG00845027149) #18 FOXE3 (ENSCAFG00845027178) #19 CMPK1 (ENSCAFG00845016195) #20 STIL (ENSCAFG00845016474) #21 TAL1 (ENSCAFG00845016668) #22 PDZK1IP1 (ENSCAFG00845016726) #23 CYP4X1 (ENSCAFG00845016805) #25 ENSCAFG00845017005 CYP4A38 (ENSCAFG00845017288) CYP4A11 (ENSCAFG00845018002) CYP4B1 (ENSCAFG00845018109) #28 EFCAB14 (ENSCAFG00845018333) #29 ENSCAFG00845018605 #30 ATPAF1 (ENSCAFG00845018669) #31 MOB3C (ENSCAFG00845018787) #33 MKNK1 (ENSCAFG00845018913) #34 KNCN (ENSCAFG00845019249) #35 DMBX1 (ENSCAFG00845019339) ENSCAFG00845019414 FAAH (ENSCAFG00845019651) Red fox MODERN SPECIES 9 ENSVVUG00000005976 C1orf185 (ENSVVUG00000005980) CDKN2C (ENSVVUG00000006026) FAF1 (ENSVVUG00000006069) ENSVVUG00000006081 ENSVVUG00000006087 ENSVVUG00000006092 ELAVL4 (ENSVVUG00000006175) #10 BEND5 (ENSVVUG00000006293) #11 ENSVVUG00000006309 #12 SPATA6 (ENSVVUG00000006346) #13 SLC5A9 (ENSVVUG00000006359) #15 TRABD2B (ENSVVUG00000006378) #17 CMPK1 (ENSVVUG00000006426) #20 STIL (ENSVVUG00000006441) #21 ENSVVUG00000006648 #22 PDZK1IP1 (ENSVVUG00000006655) #23 CYP4X1 (ENSVVUG00000006664) #25 ENSVVUG00000006690 ENSVVUG00000006722 ENSVVUG00000006748 ENSVVUG00000006767 CYP4B1 (ENSVVUG00000007000) #28 EFCAB14 (ENSVVUG00000007017) #29 TEX38 (ENSVVUG00000007029) #30 ATPAF1 (ENSVVUG00000007030) #31 MOB3C (ENSVVUG00000007033) #33 MKNK1 (ENSVVUG00000007048) #34 KNCN (ENSVVUG00000007079) #35 DMBX1 (ENSVVUG00000007090) ENSVVUG00000007109 Atlantogenata ANCESTRAL SPECIES 11 ENSGT00730000110988 ENSGT00940000163721 ENSGT00390000000797 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163540 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173 ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00940000155505.a ENSGT00940000161237 ENSGT00940000153665.b.a.b ENSGT00390000003860 ENSGT00390000015908 Xenarthra ANCESTRAL SPECIES 814 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173 ENSGT00940000161441 #28 Armadillo MODERN SPECIES 3014 STIL (ENSDNOG00000039402) #21 TAL1 (ENSDNOG00000047501) #22 PDZK1IP1 (ENSDNOG00000012587) #23 ENSDNOG00000045962 #25 ENSDNOG00000035083 CYP4B1 (ENSDNOG00000009822) #28 Afrotheria ANCESTRAL SPECIES 21 ENSGT00730000110988 ENSGT00940000163721 ENSGT00390000000797 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163540 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173 ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00940000155505.a Tenrec MODERN SPECIES 5251 ENSETEG00000008819 #21 ENSETEG00000008816 #22 ENSETEG00000008815 #23 Afrotheria_a ANCESTRAL SPECIES 20 ENSGT00730000110988 ENSGT00940000163721 ENSGT00390000000797 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163540 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000160927 #25 ENSGT00940000155173 ENSGT00940000161441 #28 ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00940000155505.a Hyrax MODERN SPECIES 4458 STIL (ENSPCAG00000006210) #21 TAL1 (ENSPCAG00000006179) #22 Elephant MODERN SPECIES 145 ENSLAFG00000026503 C1orf185 (ENSLAFG00000030448) CDKN2C (ENSLAFG00000009338) ENSLAFG00000032567 FAF1 (ENSLAFG00000012030) DMRTA2 (ENSLAFG00000021953) #7 ELAVL4 (ENSLAFG00000001087) #10 BEND5 (ENSLAFG00000003490) #11 ENSLAFG00000012535 #12 SPATA6 (ENSLAFG00000016279) #13 SLC5A9 (ENSLAFG00000016268) #15 ENSLAFG00000032111 #17 FOXD2 (ENSLAFG00000026547) #18 ENSLAFG00000006582 STIL (ENSLAFG00000006255) #21 TAL1 (ENSLAFG00000013880) #22 PDZK1IP1 (ENSLAFG00000029973) #23 ENSLAFG00000002985 #25 ENSLAFG00000027061 ENSLAFG00000011889 CYP4B1 (ENSLAFG00000011142) #28 EFCAB14 (ENSLAFG00000011146) #29 TEX38 (ENSLAFG00000032346) #30 ATPAF1 (ENSLAFG00000022494) #31 MOB3C (ENSLAFG00000002653) #33 MKNK1 (ENSLAFG00000015556) #34 KNCN (ENSLAFG00000028805) #35 DMBX1 (ENSLAFG00000010499) Marsupialia ANCESTRAL SPECIES 3 ENSGT00940000155751 ENSGT00950000182917.a.b.a ENSGT00730000110988 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399.n #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546.j #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000155173.x.a ENSGT00940000155173.x.b ENSGT00940000161441.a #28 ENSGT00940000155173.w.b ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00940000162886 #34 ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316 Marsupialia_b ANCESTRAL SPECIES 6 ENSGT00940000155751 ENSGT00950000182917.a.b.a ENSGT00730000110988 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399.n #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546.j #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000155173.x.a ENSGT00940000155173.x.b ENSGT00940000161441.a #28 ENSGT00940000155173.w.a ENSGT00940000155173.w.b ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316 Diprotodontia ANCESTRAL SPECIES 50 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000155173.x.a ENSGT00940000155173.x.b ENSGT00940000161441.a #28 ENSGT00940000155173.w.a ENSGT00940000155173.w.b ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000161237 Diprotodontia_a ANCESTRAL SPECIES 3 ENSGT00940000155751 ENSGT00950000182917.a.b.a ENSGT00730000110988 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399.n #10 ENSGT00390000001724 #11 ENSGT00940000155042.b #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546.j #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000163540 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000155173.x.a ENSGT00940000155173.x.b ENSGT00940000161441.a #28 ENSGT00940000161441.b.a.a #28 ENSGT00940000155173.w.a ENSGT00940000155173.w.b ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00400000024146 #35 ENSGT00390000008086 #36 ENSGT00940000155505.a Common wonbat MODERN SPECIES 1060 RNF11 (ENSVURG00010018204) CDKN2C (ENSVURG00010018190) FAF1 (ENSVURG00010018181) DMRTA2 (ENSVURG00010018172) #7 ELAVL4 (ENSVURG00010017721) #10 ENSVURG00010017690 BEND5 (ENSVURG00010017683) #11 ENSVURG00010017676 #12 SPATA6 (ENSVURG00010017656) #13 SLC5A9 (ENSVURG00010017646) #15 TRABD2B (ENSVURG00010017643) #17 FOXD2 (ENSVURG00010017640) #18 ENSVURG00010017639 CMPK1 (ENSVURG00010017630) #20 STIL (ENSVURG00010017620) #21 TAL1 (ENSVURG00010017608) #22 PDZK1IP1 (ENSVURG00010017600) #23 ENSVURG00010017586 ENSVURG00010017579 ENSVURG00010017567 #28 ENSVURG00010017542 #28 ENSVURG00010017535 ENSVURG00010017522 ENSVURG00010017500 EFCAB14 (ENSVURG00010017484) #29 ATPAF1 (ENSVURG00010017468) #31 ENSVURG00010017465 MOB3C (ENSVURG00010017461) #33 ENSVURG00010017435 KNCN (ENSVURG00010017426) #35 DMBX1 (ENSVURG00010017415) koala MODERN SPECIES 29 RNF11 (ENSPCIG00000017406) CDKN2C (ENSPCIG00000001502) FAF1 (ENSPCIG00000001340) DMRTA2 (ENSPCIG00000030921) #7 ELAVL4 (ENSPCIG00000032142) #10 ENSPCIG00000033716 #12 BEND5 (ENSPCIG00000004124) #11 ENSPCIG00000012506 #12 SPATA6 (ENSPCIG00000004132) #13 SLC5A9 (ENSPCIG00000019164) #15 TRABD2B (ENSPCIG00000036779) #17 FOXD2 (ENSPCIG00000024785) #18 ENSPCIG00000016604 ENSPCIG00000016606 STIL (ENSPCIG00000006238) #21 TAL1 (ENSPCIG00000033850) #22 PDZK1IP1 (ENSPCIG00000006233) #23 ENSPCIG00000006228 ENSPCIG00000026491 #28 ENSPCIG00000026492 #28 ENSPCIG00000036724 #28 ENSPCIG00000026493 ENSPCIG00000026495 ENSPCIG00000011510 #29 ENSPCIG00000011519 #30 ATPAF1 (ENSPCIG00000011520) #31 MOB3C (ENSPCIG00000011524) #33 ENSPCIG00000011528 KNCN (ENSPCIG00000011530) #35 TMEM275 (ENSPCIG00000011531) #36 DMBX1 (ENSPCIG00000029041) Wallaby MODERN SPECIES 6597 TAL1 (ENSMEUG00000011615) #22 Tasmanian devil MODERN SPECIES 3 ENSSHAG00000006819 EPS15 (ENSSHAG00000007854) TTC39A (ENSSHAG00000008699) ENSSHAG00000029224 ENSSHAG00000032332 CDKN2C (ENSSHAG00000028975) FAF1 (ENSSHAG00000011175) ELAVL4 (ENSSHAG00000030056) #10 ENSSHAG00000028157 #11 ENSSHAG00000008897 #12 SPATA6 (ENSSHAG00000009732) #13 ENSSHAG00000011466 #17 FOXD2 (ENSSHAG00000020552) #18 CMPK1 (ENSSHAG00000009766) #20 STIL (ENSSHAG00000010095) #21 TAL1 (ENSSHAG00000023407) #22 ENSSHAG00000025781 #23 ENSSHAG00000011157 ENSSHAG00000030071 ENSSHAG00000003731 #28 ENSSHAG00000002195 #28 ENSSHAG00000031091 ENSSHAG00000024463 ENSSHAG00000029874 ENSSHAG00000000201 EFCAB14 (ENSSHAG00000022941) #29 TEX38 (ENSSHAG00000002666) #30 ATPAF1 (ENSSHAG00000032278) #31 MOB3C (ENSSHAG00000025198) #33 ENSSHAG00000004306 KNCN (ENSSHAG00000016695) #35 Opossum MODERN SPECIES 1 TTC39A (ENSMODG00000001179) RNF11 (ENSMODG00000001185) CDKN2C (ENSMODG00000050495) FAF1 (ENSMODG00000001243) DMRTA2 (ENSMODG00000001251) #7 ENSMODG00000028629 ENSMODG00000037117 ELAVL4 (ENSMODG00000001300) #10 ENSMODG00000043124 SPATA6 (ENSMODG00000001370) #13 ENSMODG00000001399 #15 TRABD2B (ENSMODG00000025378) #17 ENSMODG00000001419 CMPK1 (ENSMODG00000001470) #20 STIL (ENSMODG00000001494) #21 TAL1 (ENSMODG00000001502) #22 ENSMODG00000001509 #23 ENSMODG00000001521 ENSMODG00000025699 ENSMODG00000001709 #28 ENSMODG00000045742 #28 ENSMODG00000001890 EFCAB14 (ENSMODG00000001906) #29 ATPAF1 (ENSMODG00000001918) #31 MOB3C (ENSMODG00000048219) #33 MKNK1 (ENSMODG00000001951) #34 KNCN (ENSMODG00000041143) #35 TMEM275 (ENSMODG00000025359) #36 DMBX1 (ENSMODG00000001963) ENSMODG00000029161 FAAH (ENSMODG00000001986) Platypus MODERN SPECIES 9 RNF11 (ENSOANG00000013493) ENSOANG00000050041 ENSOANG00000045226 CDKN2C (ENSOANG00000040623) FAF1 (ENSOANG00000006035) DMRTA2 (ENSOANG00000040884) #7 ELAVL4 (ENSOANG00000036778) #10 BEND5 (ENSOANG00000009132) #11 ENSOANG00000041444 #13 SLC5A9 (ENSOANG00000004257) #15 TRABD2B (ENSOANG00000037757) #17 ENSOANG00000030729 ENSOANG00000043767 ENSOANG00000015215 ENSOANG00000002942 #21 TAL1 (ENSOANG00000032005) #22 PDZK1IP1 (ENSOANG00000042171) #23 ENSOANG00000002639 ENSOANG00000002637 ENSOANG00000014732 POMGNT1 (ENSOANG00000039832) LURAP1 (ENSOANG00000044785) RAD54L (ENSOANG00000039799) LRRC41 (ENSOANG00000044307) ENSOANG00000043609 FAAH (ENSOANG00000039661) DMBX1 (ENSOANG00000040550) ENSOANG00000036851 MOB3C (ENSOANG00000047366) #33 ATPAF1 (ENSOANG00000007256) #31 ENSOANG00000049254 #30 Sauria ANCESTRAL SPECIES 7 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b.d #12 ENSGT00390000001724 #11 ENSGT00940000155042.b.c #12 ENSGT00530000063821.b.a #13 ENSGT00990000204056 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000162270.a ENSGT00940000163540 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000161527.d.a ENSGT00940000161527.d.b.a ENSGT00940000161441 #28 ENSGT00940000161527.c ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316.b ENSGT00940000163316.a.a ENSGT00940000161237 Lepidosauria ANCESTRAL SPECIES 11 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b.d #12 ENSGT00390000001724 #11 ENSGT00940000155042.b.c #12 ENSGT00530000063821.b.a #13 ENSGT00990000204056 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000162270.a ENSGT00940000163540 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000161527.d.a ENSGT00940000161527.d.b.a ENSGT00940000161441 #28 ENSGT00940000161527.c ENSGT00390000011196 #29 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316.b ENSGT00940000163316.a.b ENSGT00940000163316.a.a ENSGT00940000161237 Episquamata ANCESTRAL SPECIES 1 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b.d #12 ENSGT00390000001724 #11 ENSGT00940000155042.b.c #12 ENSGT00530000063821.b.a #13 ENSGT00990000204056 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000162270.a ENSGT00940000163540 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000161527.d.a ENSGT00940000161527.d.b.a.c ENSGT00940000161527.d.b.b ENSGT00940000161527.c ENSGT00390000011196 #29 ENSGT00960000192856 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316.b ENSGT00940000163316.a.b ENSGT00940000163316.a.a Toxicofera ANCESTRAL SPECIES 1 ENSGT00940000161649 #7 ENSGT01030000234712.a ENSGT00940000163630.Q.e.a ENSGT00940000157399 #10 ENSGT00940000155042.b.d #12 ENSGT00390000001724 #11 ENSGT00940000155042.b.c #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000162270.a ENSGT00940000163540 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000161527.d.a ENSGT00940000161527.d.b.a.d ENSGT00940000161527.c ENSGT00390000011196 #29 ENSGT00960000192856 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316.b ENSGT00940000163316.a.b ENSGT00940000163316.a.a ENSGT00940000161237 Elapidae ANCESTRAL SPECIES 1 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b.d #12 ENSGT00390000001724.d #11 ENSGT00940000155042.b.c #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000162270.a ENSGT00940000163540 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000161527.d.a ENSGT00940000161527.c.b ENSGT00390000011196 #29 ENSGT00960000192856 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316.b ENSGT00940000163316.a.b ENSGT00940000163316.a.a ENSGT00940000161237 ENSGT00940000153665.b.a.b ENSGT00390000003860 Indian cobra MODERN SPECIES 2 ENSNNAG00000011091 ENSNNAG00000011066 FAF1 (ENSNNAG00000010998) DMRTA2 (ENSNNAG00000010977) #7 ELAVL4 (ENSNNAG00000010818) #10 ENSNNAG00000010783 #12 BEND5 (ENSNNAG00000010746) #11 ENSNNAG00000010704 #12 SPATA6 (ENSNNAG00000010665) #13 SLC5A9 (ENSNNAG00000010629) #15 TRABD2B (ENSNNAG00000010576) #17 FOXD2 (ENSNNAG00000010546) #18 ENSNNAG00000010525 CMPK1 (ENSNNAG00000010501) #20 STIL (ENSNNAG00000010456) #21 TAL1 (ENSNNAG00000010424) #22 ENSNNAG00000009996 ENSNNAG00000009903 EFCAB14 (ENSNNAG00000009832) #29 ENSNNAG00000009790 ATPAF1 (ENSNNAG00000009764) #31 MOB3C (ENSNNAG00000009741) #33 ENSNNAG00000009684 DMBX1 (ENSNNAG00000009640) ENSNNAG00000009543 ENSNNAG00000009445 ENSNNAG00000009411 FAAH (ENSNNAG00000008955) NSUN4 (ENSNNAG00000008917) ENSNNAG00000008904 LRRC41 (ENSNNAG00000008886) Elapidae_a ANCESTRAL SPECIES 7 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b.d #12 ENSGT00390000001724.d #11 ENSGT00940000155042.b.c #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000162270.a ENSGT00940000163540 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000161527.d.a ENSGT00940000161527.c.b ENSGT00390000011196 #29 ENSGT00960000192856 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316.b ENSGT00940000163316.a.b ENSGT00940000163316.a.a ENSGT00940000161237 ENSGT00940000153665.b.a.b ENSGT00390000003860 Acanthophiinae ANCESTRAL SPECIES 5 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b.d #12 ENSGT00390000001724.d #11 ENSGT00940000155042.b.c #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000162270.a ENSGT00940000163540 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00980000201417 ENSGT00940000161527.d.a ENSGT00940000161527.c.b ENSGT00390000011196 #29 ENSGT00960000192856 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316.b ENSGT00940000163316.a.b ENSGT00940000163316.a.a ENSGT00940000161237 ENSGT00940000153665.b.a.b Mainland tiger snake MODERN SPECIES 13 TTC39A (ENSNSUG00000016326) CDKN2C (ENSNSUG00000016325) FAF1 (ENSNSUG00000016324) DMRTA2 (ENSNSUG00000016323) #7 ELAVL4 (ENSNSUG00000016302) #10 ENSNSUG00000016301 #12 BEND5 (ENSNSUG00000016300) #11 ENSNSUG00000016299 #12 SPATA6 (ENSNSUG00000016298) #13 SLC5A9 (ENSNSUG00000016192) #15 TRABD2B (ENSNSUG00000016185) #17 FOXD2 (ENSNSUG00000016181) #18 ENSNSUG00000016180 CMPK1 (ENSNSUG00000016179) #20 STIL (ENSNSUG00000016176) #21 TAL1 (ENSNSUG00000016175) #22 ENSNSUG00000016174 ENSNSUG00000016173 ENSNSUG00000016172 EFCAB14 (ENSNSUG00000016171) #29 ENSNSUG00000016170 ATPAF1 (ENSNSUG00000016169) #31 MOB3C (ENSNSUG00000016168) #33 ENSNSUG00000016167 ENSNSUG00000016166 TMEM275 (ENSNSUG00000016165) #36 DMBX1 (ENSNSUG00000016164) ENSNSUG00000016163 ENSNSUG00000016162 ENSNSUG00000016161 FAAH (ENSNSUG00000016160) Eastern brown snake MODERN SPECIES 34 CDKN2C (ENSPTXG00000001881) FAF1 (ENSPTXG00000001880) DMRTA2 (ENSPTXG00000001879) #7 ENSPTXG00000001878 ELAVL4 (ENSPTXG00000001627) #10 ENSPTXG00000001605 BEND5 (ENSPTXG00000001603) #11 AGBL4 (ENSPTXG00000001598) #12 SPATA6 (ENSPTXG00000001592) #13 SLC5A9 (ENSPTXG00000001588) #15 TRABD2B (ENSPTXG00000001584) #17 FOXD2 (ENSPTXG00000001582) #18 ENSPTXG00000001580 ENSPTXG00000001577 STIL (ENSPTXG00000001553) #21 ENSPTXG00000001547 #22 ENSPTXG00000001545 ENSPTXG00000001532 ENSPTXG00000001527 EFCAB14 (ENSPTXG00000001523) #29 ENSPTXG00000001516 ATPAF1 (ENSPTXG00000001511) #31 MOB3C (ENSPTXG00000001507) #33 ENSPTXG00000001502 DMBX1 (ENSPTXG00000001497) ENSPTXG00000001485 ENSPTXG00000001479 ENSPTXG00000007125 FAAH (ENSPTXG00000007124) NSUN4 (ENSPTXG00000007122) ENSPTXG00000007120 Blue-lipped sea krait MODERN SPECIES 3670 STIL (ENSLLTG00000001839) #21 TAL1 (ENSLLTG00000001859) #22 Lizard MODERN SPECIES 863 ENSACAG00000028425 #12 ENSACAG00000005675 #13 ENSACAG00000043550 ENSACAG00000044494 ENSACAG00000041750 ENSACAG00000005693 #15 ENSACAG00000005879 ENSACAG00000044679 ENSACAG00000043050 ENSACAG00000042624 TRABD2B (ENSACAG00000029091) #17 FOXD2 (ENSACAG00000005885) #18 ENSACAG00000009553 CMPK1 (ENSACAG00000040184) STIL (ENSACAG00000005943) #21 TAL1 (ENSACAG00000005980) #22 PDZK1IP1 (ENSACAG00000028602) #23 ENSACAG00000005985 ENSACAG00000006613 ENSACAG00000006620 ENSACAG00000006623 ENSACAG00000006667 ENSACAG00000035479 ENSACAG00000036683 ENSACAG00000026328 EFCAB14 (ENSACAG00000007065) #29 ENSACAG00000043641 ENSACAG00000007091 #31 Laterata ANCESTRAL SPECIES 3 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b.d #12 ENSGT00390000001724 #11 ENSGT00940000155042.b.c #12 ENSGT00530000063821.b.a #13 ENSGT00990000204056 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000162270.a ENSGT00940000163540 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000161527.d.a.c ENSGT00940000161527.d.b.a.c ENSGT00940000161527.d.b.b ENSGT00940000161527.c ENSGT00390000011196 #29 ENSGT00960000192856 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316.b ENSGT00940000163316.a.b ENSGT00940000163316.a.a Common wall lizard MODERN SPECIES 14 ENSPMRG00000005978 ELAVL4 (ENSPMRG00000005996) #10 ENSPMRG00000006025 #12 ENSPMRG00000006039 ENSPMRG00000006044 BEND5 (ENSPMRG00000006049) #11 ENSPMRG00000006060 #12 SPATA6 (ENSPMRG00000006072) #13 ENSPMRG00000007706 SLC5A9 (ENSPMRG00000007711) #15 TRABD2B (ENSPMRG00000007718) #17 FOXD2 (ENSPMRG00000007722) #18 ENSPMRG00000007733 ENSPMRG00000007758 STIL (ENSPMRG00000007767) #21 TAL1 (ENSPMRG00000007774) #22 PDZK1IP1 (ENSPMRG00000007777) #23 ENSPMRG00000007789 ENSPMRG00000007850 ENSPMRG00000007855 ENSPMRG00000007867 ENSPMRG00000007869 ENSPMRG00000007876 ENSPMRG00000007878 ENSPMRG00000007882 ENSPMRG00000007903 ENSPMRG00000008050 EFCAB14 (ENSPMRG00000008063) #29 ENSPMRG00000008077 ATPAF1 (ENSPMRG00000008083) #31 MOB3C (ENSPMRG00000008123) #33 Argentine black and white tegu MODERN SPECIES 16 CDKN2C (ENSSMRG00000018292) FAF1 (ENSSMRG00000018293) DMRTA2 (ENSSMRG00000018294) #7 ENSSMRG00000018296 ELAVL4 (ENSSMRG00000018298) #10 ENSSMRG00000018299 #12 BEND5 (ENSSMRG00000018300) #11 ENSSMRG00000018301 #12 SPATA6 (ENSSMRG00000018302) #13 ENSSMRG00000018303 SLC5A9 (ENSSMRG00000018304) #15 ENSSMRG00000018306 ENSSMRG00000018307 ENSSMRG00000018308 STIL (ENSSMRG00000018309) #21 TAL1 (ENSSMRG00000018311) #22 PDZK1IP1 (ENSSMRG00000018312) #23 ENSSMRG00000018313 ENSSMRG00000018315 ENSSMRG00000018331 EFCAB14 (ENSSMRG00000018332) #29 ATPAF1 (ENSSMRG00000018333) #31 MOB3C (ENSSMRG00000018334) #33 ENSSMRG00000018336 TMEM275 (ENSSMRG00000018337) #36 DMBX1 (ENSSMRG00000018338) ENSSMRG00000018339 ENSSMRG00000018340 NSUN4 (ENSSMRG00000018341) ENSSMRG00000018342 LRRC41 (ENSSMRG00000018343) tuatara MODERN SPECIES 1725 EPS15 (ENSSPUG00000011819) TTC39A (ENSSPUG00000011783) RNF11 (ENSSPUG00000011773) CDKN2C (ENSSPUG00000011758) FAF1 (ENSSPUG00000011732) ELAVL4 (ENSSPUG00000011636) #10 ENSSPUG00000011621 #12 ENSSPUG00000011602 #11 ENSSPUG00000011592 #12 SPATA6 (ENSSPUG00000011583) #13 SLC5A9 (ENSSPUG00000011544) #15 FOXD2 (ENSSPUG00000011531) #18 ENSSPUG00000011518 ENSSPUG00000011504 STIL (ENSSPUG00000011248) #21 TAL1 (ENSSPUG00000011173) #22 CYP4B38 (ENSSPUG00000010929) CYP4B37 (ENSSPUG00000010107) CYP4B36 (ENSSPUG00000009899) CYP4B35 (ENSSPUG00000009557) #28 CYP4B1 (ENSSPUG00000009405) EFCAB14 (ENSSPUG00000009350) #29 ATPAF1 (ENSSPUG00000009006) #31 MOB3C (ENSSPUG00000008916) #33 ENSSPUG00000008905 DMBX1 (ENSSPUG00000008894) ENSSPUG00000008867 ENSSPUG00000008848 ENSSPUG00000008796 FAAH (ENSSPUG00000008773) NSUN4 (ENSSPUG00000008598) Archelosauria ANCESTRAL SPECIES 9 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b.d #12 ENSGT00390000001724 #11 ENSGT00940000155042.b.c #12 ENSGT00530000063821.b.a #13 ENSGT00990000204056 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000162270.a ENSGT00940000163540 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000161527.d.a ENSGT00940000161527.c.e ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316.b ENSGT00940000161237 ENSGT00940000163316.a.a ENSGT00940000153665.b.a.b ENSGT00390000003860 Cryptodira ANCESTRAL SPECIES 8 ENSGT00730000110988 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b.d #12 ENSGT00390000001724 #11 ENSGT00940000155042.b.c #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000162270.a ENSGT00940000161273 #17 ENSGT00940000163540 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000161527.d.a ENSGT00940000161527.d.b.b ENSGT00940000161527.c.f ENSGT00940000161527.c.e ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316.b ENSGT00940000161237 ENSGT00940000163316.a.a Testudinoidea ANCESTRAL SPECIES 5 ENSGT00730000110988 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b.d #12 ENSGT00390000001724 #11 ENSGT00940000155042.b.c #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000162270.a ENSGT00940000163540 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000161527.d.a ENSGT00940000161527.d.b.a ENSGT00940000161441 #28 ENSGT00940000161527.c.f ENSGT00940000161527.c.e ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316.b ENSGT00940000161237 Emydidae ANCESTRAL SPECIES 22 ENSGT00940000154690 ENSGT00940000155751 ENSGT00950000182917.a.b.a ENSGT00730000110988 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b.d #12 ENSGT00390000001724 #11 ENSGT00940000155042.b.c #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000163540 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000161527.d.a ENSGT00940000161527.d.b.a ENSGT00940000161441 #28 ENSGT00940000161527.c.f ENSGT00940000161527.c.e ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316.b ENSGT00940000163316.a.a painted turtle MODERN SPECIES 698 CDKN2C (ENSCPBG00000010037) FAF1 (ENSCPBG00000010024) DMRTA2 (ENSCPBG00000010018) #7 ELAVL4 (ENSCPBG00000010017) #10 ENSCPBG00000010014 ENSCPBG00000010011 #12 BEND5 (ENSCPBG00000010006) #11 ENSCPBG00000009998 #12 SPATA6 (ENSCPBG00000009991) #13 SLC5A9 (ENSCPBG00000009981) #15 ENSCPBG00000009979 ENSCPBG00000009977 ENSCPBG00000009970 ENSCPBG00000009969 STIL (ENSCPBG00000009963) #21 TAL1 (ENSCPBG00000009956) #22 PDZK1IP1 (ENSCPBG00000009955) #23 ENSCPBG00000009909 ENSCPBG00000009792 ENSCPBG00000009551 ENSCPBG00000009505 ENSCPBG00000009470 ENSCPBG00000009449 ENSCPBG00000009058 ENSCPBG00000009018 EFCAB14 (ENSCPBG00000009010) #29 TEX38 (ENSCPBG00000009005) #30 ATPAF1 (ENSCPBG00000008995) #31 MOB3C (ENSCPBG00000008983) #33 ENSCPBG00000008965 TMEM275 (ENSCPBG00000008960) #36 Three-toed box turtle MODERN SPECIES 47 FOXD2 (ENSTMTG00000008590) #18 ENSTMTG00000008602 ENSTMTG00000008607 ENSTMTG00000008619 STIL (ENSTMTG00000008637) #21 TAL1 (ENSTMTG00000008852) #22 ENSTMTG00000008864 ENSTMTG00000008883 ENSTMTG00000008967 ENSTMTG00000009631 #28 ENSTMTG00000009718 EFCAB14 (ENSTMTG00000010371) #29 ATPAF1 (ENSTMTG00000010398) #31 MOB3C (ENSTMTG00000010428) #33 ENSTMTG00000010437 DMBX1 (ENSTMTG00000010467) ENSTMTG00000010486 ENSTMTG00000010541 ENSTMTG00000010676 ENSTMTG00000010712 NSUN4 (ENSTMTG00000010730) Testudinidae ANCESTRAL SPECIES 33 ENSGT00950000182917.a.b.a ENSGT00730000110988 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b.d #12 ENSGT00390000001724 #11 ENSGT00940000155042.b.c #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000162270.a ENSGT00940000163540 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000161527.d.a ENSGT00940000161527.d.b.a ENSGT00940000161441 #28 ENSGT00940000161527.c.f ENSGT00940000161527.c.e ENSGT00390000011196 #29 ENSGT00390000016446 #30 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316.b ENSGT00940000161237 Goode s thornscrub tortoise MODERN SPECIES 22 TTC39A (ENSGEVG00005016642) RNF11 (ENSGEVG00005017825) CDKN2C (ENSGEVG00005017834) FAF1 (ENSGEVG00005017857) DMRTA2 (ENSGEVG00005017905) #7 ELAVL4 (ENSGEVG00005017971) #10 ENSGEVG00005018302 #12 BEND5 (ENSGEVG00005018332) #11 ENSGEVG00005018360 #12 SPATA6 (ENSGEVG00005018413) #13 SLC5A9 (ENSGEVG00005018452) #15 FOXD2 (ENSGEVG00005018509) #18 ENSGEVG00005018529 ENSGEVG00005018548 STIL (ENSGEVG00005018571) #21 TAL1 (ENSGEVG00005018730) #22 PDZK1IP1 (ENSGEVG00005018742) #23 ENSGEVG00005018800 ENSGEVG00005019175 ENSGEVG00005019318 ENSGEVG00005019451 EFCAB14 (ENSGEVG00005019524) #29 TEX38 (ENSGEVG00005019533) #30 ATPAF1 (ENSGEVG00005019541) #31 MOB3C (ENSGEVG00005019561) #33 ENSGEVG00005019576 DMBX1 (ENSGEVG00005019588) ENSGEVG00005019602 FAAH (ENSGEVG00005019620) ENSGEVG00005019637 NSUN4 (ENSGEVG00005019648) Abingdon island giant tortoise MODERN SPECIES 2304 TRABD2B (ENSCABG00000010239) #17 ENSCABG00000010240 FOXD2 (ENSCABG00000010241) #18 ENSCABG00000010242 ENSCABG00000010243 STIL (ENSCABG00000010245) #21 TAL1 (ENSCABG00000010248) #22 PDZK1IP1 (ENSCABG00000010251) #23 ENSCABG00000010253 ENSCABG00000010355 CYP4B1 (ENSCABG00000010391) #28 ENSCABG00000010415 ENSCABG00000010908 EFCAB14 (ENSCABG00000011128) #29 TEX38 (ENSCABG00000011132) #30 ATPAF1 (ENSCABG00000011133) #31 MOB3C (ENSCABG00000011134) #33 ENSCABG00000011135 TMEM275 (ENSCABG00000011136) #36 DMBX1 (ENSCABG00000011137) ENSCABG00000011138 ENSCABG00000011142 Chinese turtle MODERN SPECIES 1294 FAF1 (ENSPSIG00000006306) ENSPSIG00000008525 ELAVL4 (ENSPSIG00000008545) #10 ENSPSIG00000000289 BEND5 (ENSPSIG00000008975) #11 ENSPSIG00000000294 ENSPSIG00000008990 #12 SPATA6 (ENSPSIG00000009039) #13 SLC5A9 (ENSPSIG00000009335) #15 ENSPSIG00000000298 ENSPSIG00000000303 ENSPSIG00000010057 #17 ENSPSIG00000010073 ENSPSIG00000010159 STIL (ENSPSIG00000010417) #21 TAL1 (ENSPSIG00000010614) #22 ENSPSIG00000010643 ENSPSIG00000012049 Archosauria ANCESTRAL SPECIES 11 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b.d #12 ENSGT00390000001724 #11 ENSGT00940000155042.b.c #12 ENSGT00530000063821.b.a #13 ENSGT00990000204056 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000162270.a ENSGT00940000163540 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000161527.d.a ENSGT00940000161527.c.e ENSGT00390000011196 #29 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000161237 ENSGT00940000163316.a.a ENSGT00940000163316.b ENSGT00940000153665.b.a.b ENSGT00390000003860 ENSGT00390000015908 Australian saltwater crocodile MODERN SPECIES 28 OSBPL9 (ENSCPRG00005000700) EPS15 (ENSCPRG00005000597) TTC39A (ENSCPRG00005000251) ENSCPRG00005018102 CDKN2C (ENSCPRG00005018099) FAF1 (ENSCPRG00005018094) ELAVL4 (ENSCPRG00005018078) #10 ENSCPRG00005018070 #12 BEND5 (ENSCPRG00005018063) #11 ENSCPRG00005018057 #12 SPATA6 (ENSCPRG00005018049) #13 SLC5A9 (ENSCPRG00005018045) #15 TRABD2B (ENSCPRG00005018038) #17 ENSCPRG00005018033 STIL (ENSCPRG00005018027) #21 TAL1 (ENSCPRG00005018024) #22 ENSCPRG00005018022 ENSCPRG00005017986 ENSCPRG00005017973 EFCAB14 (ENSCPRG00005017964) #29 ENSCPRG00005017961 ATPAF1 (ENSCPRG00005017958) #31 MOB3C (ENSCPRG00005017953) #33 ENSCPRG00005017951 TMEM275 (ENSCPRG00005017950) #36 DMBX1 (ENSCPRG00005017947) RAD54L (ENSCPRG00005017943) ENSCPRG00005017941 ENSCPRG00005017938 ENSCPRG00005017934 NSUN4 (ENSCPRG00005017933) Aves ANCESTRAL SPECIES 7 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b.d #12 ENSGT00390000001724 #11 ENSGT00940000155042.b.c #12 ENSGT00530000063821.b.a #13 ENSGT00990000204056 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000162270.a ENSGT00940000163540 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000161527.d.a ENSGT00940000161527.c.e ENSGT00390000011196 #29 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000161237 ENSGT00940000163316.a.a ENSGT00940000163316.b ENSGT00940000153665.b.a.b ENSGT00390000003860 ENSGT00390000015908 African ostrich MODERN SPECIES 578 BEND5 (ENSSCUG00000012326) #11 AGBL4 (ENSSCUG00000012327) #12 SPATA6 (ENSSCUG00000012330) #13 SLC5A9 (ENSSCUG00000012331) #15 TRABD2B (ENSSCUG00000012332) #17 ENSSCUG00000012336 STIL (ENSSCUG00000012337) #21 TAL1 (ENSSCUG00000012338) #22 PDZK1IP1 (ENSSCUG00000012339) #23 ENSSCUG00000012340 ENSSCUG00000012342 EFCAB14 (ENSSCUG00000012343) #29 ATPAF1 (ENSSCUG00000012344) #31 MOB3C (ENSSCUG00000012345) #33 ENSSCUG00000012346 DMBX1 (ENSSCUG00000012347) ENSSCUG00000012348 FAAH (ENSSCUG00000012349) ENSSCUG00000012351 ENSSCUG00000012354 NSUN4 (ENSSCUG00000012356) ENSSCUG00000012357 ENSSCUG00000012358 Neognathae ANCESTRAL SPECIES 8 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b.d #12 ENSGT00390000001724 #11 ENSGT00940000155042.b.c #12 ENSGT00530000063821.b.a #13 ENSGT00990000204056 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000162270.a ENSGT00940000163540 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000161527.d.a ENSGT00940000161527.c.e ENSGT00390000011196 #29 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000161237 ENSGT00940000163316.a.a ENSGT00940000163316.b ENSGT00940000153665.b.a.b ENSGT00390000003860 ENSGT00390000015908 Galloanserae ANCESTRAL SPECIES 8 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b.d #12 ENSGT00390000001724 #11 ENSGT00940000155042.b.c #12 ENSGT00530000063821.b.a #13 ENSGT00990000204056 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000162270.a ENSGT00940000163540 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000161527.d.a ENSGT00940000161527.c.e ENSGT00390000011196 #29 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000161237 ENSGT00940000163316.a.a ENSGT00940000163316.b ENSGT00940000153665.b.a.b ENSGT00390000003860 ENSGT00390000015908 Phasianidae ANCESTRAL SPECIES 7 ENSGT00730000110988 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b.c #12 ENSGT00530000063821.b.a #13 ENSGT00990000204056 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000162270.a ENSGT00940000163540 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000161527.d.a ENSGT00940000161527.c.e ENSGT00390000011196 #29 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00390000008086 #36 ENSGT00940000161237 ENSGT00940000155505.a ENSGT00940000163316.a.a ENSGT00940000163316.b ENSGT00940000153665.b.a.b ENSGT00390000003860 ENSGT00390000015908 Japanese quail MODERN SPECIES 26 RNF11 (ENSCJPG00005010446) CDKN2C (ENSCJPG00005010445) FAF1 (ENSCJPG00005010278) DMRTA2 (ENSCJPG00005010277) #7 ELAVL4 (ENSCJPG00005010275) #10 BEND5 (ENSCJPG00005010274) #11 AGBL4 (ENSCJPG00005010272) #12 ENSCJPG00005010271 SPATA6 (ENSCJPG00005010270) #13 SLC5A9 (ENSCJPG00005010085) #15 TRABD2B (ENSCJPG00005010082) #17 FOXD2 (ENSCJPG00005010080) #18 ENSCJPG00005010079 ENSCJPG00005010078 STIL (ENSCJPG00005010077) #21 TAL1 (ENSCJPG00005010076) #22 ENSCJPG00005010075 ENSCJPG00005010074 EFCAB14 (ENSCJPG00005010073) #29 ATPAF1 (ENSCJPG00005010072) #31 MOB3C (ENSCJPG00005010071) #33 ENSCJPG00005010070 TMEM275 (ENSCJPG00005010069) #36 DMBX1 (ENSCJPG00005010066) FAAH (ENSCJPG00005010065) ENSCJPG00005010064 ENSCJPG00005010063 NSUN4 (ENSCJPG00005010062) LRRC41 (ENSCJPG00005010061) RAD54L (ENSCJPG00005010060) LURAP1 (ENSCJPG00005010059) Phasianidae_b ANCESTRAL SPECIES 7 ENSGT00950000182917.a.b.a.b ENSGT00940000163721 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00390000001724 #11 ENSGT00940000155042.b.c #12 ENSGT00530000063821.b.a #13 ENSGT00990000204056 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000162270.a ENSGT00940000163540 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000161527.d.a ENSGT00940000161527.c.e ENSGT00390000011196 #29 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00940000161237 ENSGT00940000155505.a ENSGT00940000163316.a.a ENSGT00940000163316.b ENSGT00940000153665.b.a.b ENSGT00390000003860 ENSGT00390000015908 ENSGT00940000156897 Chicken MODERN SPECIES 37 RNF11 (ENSGALG00010024551) CDKN2C (ENSGALG00010024533) FAF1 (ENSGALG00010024514) DMRTA2 (ENSGALG00010022784) #7 ELAVL4 (ENSGALG00010022760) #10 ENSGALG00010024774 BEND5 (ENSGALG00010024659) #11 AGBL4 (ENSGALG00010027088) #12 ENSGALG00010024768 SPATA6 (ENSGALG00010024758) #13 SLC5A9 (ENSGALG00010024728) #15 TRABD2B (ENSGALG00010024695) #17 ENSGALG00010026936 CMPK1 (ENSGALG00010024686) STIL (ENSGALG00010024669) #21 TAL1 (ENSGALG00010022991) #22 PDZK1IP1 (ENSGALG00010022948) #23 CYP4B7 (ENSGALG00010022917) EFCAB14 (ENSGALG00010022874) #29 ATPAF1 (ENSGALG00010022867) #31 MOB3C (ENSGALG00010022860) #33 MKNK1 (ENSGALG00010023356) DMBX1 (ENSGALG00010022675) VDHAP (ENSGALG00010027076) ENSGALG00010022999 NSUN4 (ENSGALG00010023124) UQCRHL (ENSGALG00010023114) LRRC41 (ENSGALG00010023090) RAD54L (ENSGALG00010023052) LURAP1 (ENSGALG00010023097) POMGNT1 (ENSGALG00010023073) Turkey MODERN SPECIES 1 LURAP1 (ENSMGAG00000010613) ENSMGAG00000010634 ENSMGAG00000020766 NSUN4 (ENSMGAG00000010675) ENSMGAG00000010666 LRRC41 (ENSMGAG00000010654) ENSMGAG00000010684 ENSMGAG00000010681 ENSMGAG00000010718 ENSMGAG00000010722 ENSMGAG00000010730 #33 ENSMGAG00000010732 #31 ENSMGAG00000010747 #29 ENSMGAG00000010784 ENSMGAG00000010752 ENSMGAG00000010823 #22 ENSMGAG00000010795 #21 ENSMGAG00000010814 ENSMGAG00000010792 TRABD2B (ENSMGAG00000017913) #17 ENSMGAG00000021374 #13 ENSMGAG00000010829 #15 ENSMGAG00000010855 #13 ENSMGAG00000010874 #11 ENSMGAG00000019230 #12 ELAVL4 (ENSMGAG00000010928) #10 ENSMGAG00000010948 ENSMGAG00000022627 ENSMGAG00000010982 ENSMGAG00000010980 ENSMGAG00000022271 Anatidae ANCESTRAL SPECIES 5 ENSGT00730000110988 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b.d #12 ENSGT00390000001724 #11 ENSGT00940000155042.b.c #12 ENSGT00530000063821.b.a #13 ENSGT00990000204056 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000162270.a ENSGT00940000163540 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000161527.d.a ENSGT00940000161527.c.e ENSGT00390000011196 #29 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000161237 ENSGT00940000163316.a.a ENSGT00940000163316.b ENSGT00940000153665.b.a.b ENSGT00390000003860 ENSGT00390000015908 Pink-footed goose MODERN SPECIES 1 TTC39A (ENSABRG00000015248) RNF11 (ENSABRG00000015288) CDKN2C (ENSABRG00000015292) FAF1 (ENSABRG00000015320) DMRTA2 (ENSABRG00000015596) #7 ELAVL4 (ENSABRG00000015613) #10 AGBL4 (ENSABRG00000015624) #12 BEND5 (ENSABRG00000015631) #11 ENSABRG00000015638 #12 SPATA6 (ENSABRG00000015644) #13 SLC5A9 (ENSABRG00000015750) #15 TRABD2B (ENSABRG00000016692) #17 ENSABRG00000016705 ENSABRG00000016710 STIL (ENSABRG00000016714) #21 TAL1 (ENSABRG00000016716) #22 PDZK1IP1 (ENSABRG00000016718) #23 ENSABRG00000016720 ENSABRG00000016721 EFCAB14 (ENSABRG00000016757) #29 ATPAF1 (ENSABRG00000016766) #31 MOB3C (ENSABRG00000016771) #33 ENSABRG00000016779 TMEM275 (ENSABRG00000016800) #36 DMBX1 (ENSABRG00000016803) ENSABRG00000016807 ENSABRG00000016808 ENSABRG00000016829 NSUN4 (ENSABRG00000016836) ENSABRG00000016838 LRRC41 (ENSABRG00000016846) Neognathae_b ANCESTRAL SPECIES 10 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b.d #12 ENSGT00390000001724 #11 ENSGT00940000155042.b.c #12 ENSGT00530000063821.b.a #13 ENSGT00990000204056 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000162270.a ENSGT00940000163540 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000161527.d.a ENSGT00940000161527.c.e ENSGT00390000011196 #29 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000161237 ENSGT00940000163316.a.a ENSGT00940000163316.b ENSGT00940000153665.b.a.b ENSGT00390000003860 ENSGT00390000015908 Passeriformes ANCESTRAL SPECIES 8 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b.d #12 ENSGT00390000001724 #11 ENSGT00940000155042.b.c #12 ENSGT00530000063821.b.a #13 ENSGT00990000204056 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000162270.a ENSGT00940000163540 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000161527.d.a ENSGT00940000161527.c.e ENSGT00390000011196 #29 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000161237 ENSGT00940000163316.a.a ENSGT00940000163316.b ENSGT00940000153665.b.a.b ENSGT00390000003860 ENSGT00390000015908 Great tit MODERN SPECIES 28 CDKN2C (ENSPMJG00000000777) FAF1 (ENSPMJG00000000748) DMRTA2 (ENSPMJG00000000744) #7 ELAVL4 (ENSPMJG00000000678) #10 ENSPMJG00000000668 BEND5 (ENSPMJG00000000641) #11 AGBL4 (ENSPMJG00000000580) #12 ENSPMJG00000000555 SPATA6 (ENSPMJG00000000488) #13 SLC5A9 (ENSPMJG00000000463) #15 TRABD2B (ENSPMJG00000000435) #17 FOXD2 (ENSPMJG00000000414) #18 FOXE1 (ENSPMJG00000000299) ENSPMJG00000000275 STIL (ENSPMJG00000000254) #21 TAL1 (ENSPMJG00000000238) #22 PDZK1IP1 (ENSPMJG00000000226) #23 ENSPMJG00000000216 ENSPMJG00000000189 EFCAB14 (ENSPMJG00000000135) #29 ATPAF1 (ENSPMJG00000000092) #31 MOB3C (ENSPMJG00000000048) #33 ENSPMJG00000019632 TMEM275 (ENSPMJG00000019631) #36 DMBX1 (ENSPMJG00000019630) FAAH (ENSPMJG00000019628) ENSPMJG00000019627 ENSPMJG00000019624 NSUN4 (ENSPMJG00000019620) ENSPMJG00000019616 LRRC41 (ENSPMJG00000019615) Passeriformes_d ANCESTRAL SPECIES 9 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b.d #12 ENSGT00390000001724 #11 ENSGT00940000155042.b.c #12 ENSGT00530000063821.b.a #13 ENSGT00990000204056 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000162270.a ENSGT00940000163540 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000161527.d.a ENSGT00940000161527.c.e ENSGT00390000011196 #29 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000161237 ENSGT00940000163316.a.a ENSGT00940000163316.b ENSGT00940000153665.b.a.b ENSGT00390000003860 ENSGT00390000015908 Flycatcher MODERN SPECIES 27 ENSFALG00000005378 CDKN2C (ENSFALG00000005371) FAF1 (ENSFALG00000005360) DMRTA2 (ENSFALG00000005353) #7 ELAVL4 (ENSFALG00000025747) #10 AGBL4 (ENSFALG00000025862) #12 BEND5 (ENSFALG00000005315) #11 ENSFALG00000005309 #12 SPATA6 (ENSFALG00000005303) #13 ENSFALG00000025840 SLC5A9 (ENSFALG00000005278) #15 TRABD2B (ENSFALG00000005263) #17 ENSFALG00000009291 ENSFALG00000025721 STIL (ENSFALG00000009298) #21 TAL1 (ENSFALG00000009303) #22 PDZK1IP1 (ENSFALG00000009311) #23 ENSFALG00000009327 ENSFALG00000009359 EFCAB14 (ENSFALG00000009363) #29 ATPAF1 (ENSFALG00000028925) #31 MOB3C (ENSFALG00000009374) #33 ENSFALG00000009378 ENSFALG00000024196 ENSFALG00000009400 ENSFALG00000009429 NSUN4 (ENSFALG00000028643) ENSFALG00000028231 LRRC41 (ENSFALG00000009461) RAD54L (ENSFALG00000009480) LURAP1 (ENSFALG00000009504) Passeriformes_g ANCESTRAL SPECIES 10 ENSGT00730000110988 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b.d #12 ENSGT00390000001724 #11 ENSGT00940000155042.b.c #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000162270.a ENSGT00940000163540 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000161527.d.a ENSGT00940000161527.c.e ENSGT00390000011196 #29 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000161237 ENSGT00940000163316.a.a ENSGT00940000163316.b ENSGT00940000153665.b.a.b ENSGT00390000003860 ENSGT00390000015908 Medium ground finch MODERN SPECIES 50 SLC5A9 (ENSGFOG00000011742) #15 SPATA6 (ENSGFOG00000011726) #13 TRABD2B (ENSGFOG00000011719) #17 ENSGFOG00000011713 STIL (ENSGFOG00000011699) #21 TAL1 (ENSGFOG00000011696) #22 ENSGFOG00000011241 ENSGFOG00000010906 EFCAB14 (ENSGFOG00000010880) #29 ENSGFOG00000010874 ATPAF1 (ENSGFOG00000010864) #31 MOB3C (ENSGFOG00000010857) #33 ENSGFOG00000010842 DMBX1 (ENSGFOG00000010834) FAAH (ENSGFOG00000010792) ENSGFOG00000010777 NSUN4 (ENSGFOG00000010770) ENSGFOG00000010765 LRRC41 (ENSGFOG00000010756) RAD54L (ENSGFOG00000010680) POMGNT1 (ENSGFOG00000010649) Passeroidea ANCESTRAL SPECIES 9 ENSGT00730000110988 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b.d #12 ENSGT00390000001724 #11 ENSGT00940000155042.b.c #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000162270.a ENSGT00940000163540 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000161527.d.a ENSGT00940000161527.c.e ENSGT00390000011196 #29 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000161237 ENSGT00940000163316.a.a ENSGT00940000163316.b ENSGT00940000153665.b.a.b ENSGT00390000003860 ENSGT00390000015908 Zebra finch MODERN SPECIES 30 TTC39A (ENSTGUG00000008658) RNF11 (ENSTGUG00000022215) CDKN2C (ENSTGUG00000026124) FAF1 (ENSTGUG00000008610) DMRTA2 (ENSTGUG00000028863) #7 ELAVL4 (ENSTGUG00000008597) #10 BEND5 (ENSTGUG00000008591) #11 AGBL4 (ENSTGUG00000008586) #12 SPATA6 (ENSTGUG00000025010) #13 SLC5A9 (ENSTGUG00000028559) #15 TRABD2B (ENSTGUG00000028844) #17 FOXD2 (ENSTGUG00000023676) #18 ENSTGUG00000023854 ENSTGUG00000008563 STIL (ENSTGUG00000008545) #21 TAL1 (ENSTGUG00000008542) #22 PDZK1IP1 (ENSTGUG00000008532) #23 ENSTGUG00000008524 ENSTGUG00000008418 EFCAB14 (ENSTGUG00000008408) #29 ENSTGUG00000019172 ATPAF1 (ENSTGUG00000008394) #31 MOB3C (ENSTGUG00000008386) #33 ENSTGUG00000008358 TMEM275 (ENSTGUG00000027598) #36 DMBX1 (ENSTGUG00000008353) FAAH (ENSTGUG00000008323) ENSTGUG00000017201 ENSTGUG00000008319 NSUN4 (ENSTGUG00000021857) UQCRH (ENSTGUG00000008278) Common canary MODERN SPECIES 9 EPS15 (ENSSCAG00000003714) TTC39A (ENSSCAG00000003706) ENSSCAG00000003699 CDKN2C (ENSSCAG00000003689) FAF1 (ENSSCAG00000003680) ELAVL4 (ENSSCAG00000003671) #10 ENSSCAG00000003665 #12 BEND5 (ENSSCAG00000003637) #11 ENSSCAG00000003625 #12 SPATA6 (ENSSCAG00000003616) #13 SLC5A9 (ENSSCAG00000003587) #15 TRABD2B (ENSSCAG00000003575) #17 FOXE1 (ENSSCAG00000003549) ENSSCAG00000003547 STIL (ENSSCAG00000003537) #21 ENSSCAG00000003518 #22 PDZK1IP1 (ENSSCAG00000003514) #23 ENSSCAG00000003305 ENSSCAG00000003281 EFCAB14 (ENSSCAG00000003273) #29 ATPAF1 (ENSSCAG00000003265) #31 MOB3C (ENSSCAG00000003260) #33 ENSSCAG00000003252 TMEM275 (ENSSCAG00000003248) #36 DMBX1 (ENSSCAG00000003244) ENSSCAG00000003239 ENSSCAG00000003233 NSUN4 (ENSSCAG00000003229) ENSSCAG00000003227 LRRC41 (ENSSCAG00000003220) RAD54L (ENSSCAG00000003152) Neognathae_c ANCESTRAL SPECIES 7 ENSGT00730000110988 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b.d #12 ENSGT00390000001724 #11 ENSGT00940000155042.b.c #12 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000162270.a ENSGT00940000163540 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000161527.d.a ENSGT00940000161527.c.e ENSGT00390000011196 #29 ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000161237 ENSGT00940000163316.a.a ENSGT00940000163316.b ENSGT00940000153665.b.a.b ENSGT00390000003860 ENSGT00390000015908 Golden eagle MODERN SPECIES 3 CDKN2C (ENSACCG00020002458) FAF1 (ENSACCG00020009672) DMRTA2 (ENSACCG00020009658) #7 ELAVL4 (ENSACCG00020009639) #10 ENSACCG00020009618 #12 BEND5 (ENSACCG00020009603) #11 ENSACCG00020009573 #12 SPATA6 (ENSACCG00020009549) #13 ENSACCG00020009515 TRABD2B (ENSACCG00020009471) #17 FOXD2 (ENSACCG00020009458) #18 ENSACCG00020009444 ENSACCG00020009431 ENSACCG00020009428 STIL (ENSACCG00020009378) #21 TAL1 (ENSACCG00020009310) #22 PDZK1IP1 (ENSACCG00020009303) #23 ENSACCG00020009286 ENSACCG00020009272 EFCAB14 (ENSACCG00020009253) #29 ATPAF1 (ENSACCG00020009237) #31 MOB3C (ENSACCG00020009219) #33 ENSACCG00020009204 DMBX1 (ENSACCG00020009185) FAAH (ENSACCG00020009164) ENSACCG00020009114 ENSACCG00020009073 ENSACCG00020009065 LRRC41 (ENSACCG00020009052) RAD54L (ENSACCG00020009028) ENSACCG00020009010 Kakapo MODERN SPECIES 25 FAF1 (ENSSHBG00005007518) DMRTA2 (ENSSHBG00005007507) #7 ELAVL4 (ENSSHBG00005007474) #10 ENSSHBG00005007432 #12 BEND5 (ENSSHBG00005007417) #11 ENSSHBG00005007400 #12 ENSSHBG00005007379 #13 ENSSHBG00005007361 ENSSHBG00005007346 #13 SLC5A9 (ENSSHBG00005007272) #15 TRABD2B (ENSSHBG00005007228) #17 FOXD2 (ENSSHBG00005007218) #18 ENSSHBG00005007192 ENSSHBG00005007170 STIL (ENSSHBG00005007114) #21 TAL1 (ENSSHBG00005007088) #22 PDZK1IP1 (ENSSHBG00005007075) #23 ENSSHBG00005006437 ENSSHBG00005006306 EFCAB14 (ENSSHBG00005006278) #29 ATPAF1 (ENSSHBG00005006246) #31 MOB3C (ENSSHBG00005006236) #33 ENSSHBG00005006223 ENSSHBG00005006177 TMEM275 (ENSSHBG00005006147) #36 DMBX1 (ENSSHBG00005006125) FAAH (ENSSHBG00005006094) ENSSHBG00005006062 ENSSHBG00005006024 NSUN4 (ENSSHBG00005006011) ENSSHBG00005006002 Anura ANCESTRAL SPECIES 6 ENSGT00730000110988 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.b #12 ENSGT00390000001724 #11 ENSGT00940000175969 ENSGT00530000063821.b.a #13 ENSGT00940000157546 #15 ENSGT00940000161273 #17 ENSGT00940000157140.b.a.b.a #18 ENSGT00940000162270 ENSGT00940000160589 #20 ENSGT00390000007310 #21 ENSGT00940000159889 #22 ENSGT00940000154660.b #23 ENSGT00940000161527.a.b.b ENSGT00940000161527.b ENSGT00940000161527.a.b.a ENSGT00390000011196 #29 ENSGT00940000154586.a ENSGT00390000012765 #31 ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00390000008086 #36 ENSGT00940000155505.a ENSGT00940000163316.c ENSGT00940000161237 ENSGT00940000153665.b.a.b ENSGT00390000003860 Frog MODERN SPECIES 4 dmrta2 (ENSXETG00000002846) #7 ppp1r26 (ENSXETG00000008680) #10 ENSXETG00000035079 agbl4 (ENSXETG00000008687) #11 ENSXETG00000037622 ENSXETG00000042689 #13 ENSXETG00000044812 ENSXETG00000042521 slc5a9 (ENSXETG00000006935) #15 trabd2b (ENSXETG00000035683) #17 ENSXETG00000037072 foxd2 (ENSXETG00000047367) #18 foxe3 (ENSXETG00000016339) cmpk1 (ENSXETG00000043840) #20 stil (ENSXETG00000016343) #21 tal1 (ENSXETG00000041260) #22 pdzk1ip1 (ENSXETG00000032460) #23 cyp4b1.4 (ENSXETG00000024496) cyp4b1.5 (ENSXETG00000040829) cyp4b1 (ENSXETG00000024498) efcab14 (ENSXETG00000016352) #29 ccnb1.2 (ENSXETG00000016354) atpaf1 (ENSXETG00000024499) #31 mob3c (ENSXETG00000016355) #33 mknk1 (ENSXETG00000016357) ENSXETG00000035045 TMEM275 (ENSXETG00000045969) #36 dmbx1 (ENSXETG00000004360) ENSXETG00000042239 ENSXETG00000043105 faah.3 (ENSXETG00000004361) Leishan spiny toad MODERN SPECIES 11 ENSLLEG00000029143 ENSLLEG00000029132 BEND5 (ENSLLEG00000029117) #11 ENSLLEG00000029098 ENSLLEG00000029090 SPATA6 (ENSLLEG00000029043) #13 ENSLLEG00000029040 ENSLLEG00000028872 #15 ENSLLEG00000028790 #15 ENSLLEG00000028776 TRABD2B (ENSLLEG00000028753) #17 FOXD2 (ENSLLEG00000028734) #18 ENSLLEG00000028721 CMPK1 (ENSLLEG00000028695) #20 STIL (ENSLLEG00000028599) #21 TAL1 (ENSLLEG00000028576) #22 ENSLLEG00000028546 ENSLLEG00000028380 ENSLLEG00000024624 ENSLLEG00000022725 ENSLLEG00000022482 ENSLLEG00000022306 ENSLLEG00000022264 MOB3C (ENSLLEG00000022215) #33 ENSLLEG00000022132 ENSLLEG00000022118 ENSLLEG00000022096 DMBX1 (ENSLLEG00000021978) ENSLLEG00000021947 ENSLLEG00000021917 ENSLLEG00000021759 Coelacanth MODERN SPECIES 391 FOXD2 (ENSLACG00000008597) #18 foxe3 (ENSLACG00000009117) CMPK1 (ENSLACG00000010172) #20 STIL (ENSLACG00000010678) #21 TAL1 (ENSLACG00000011366) #22 ENSLACG00000012087 ENSLACG00000012718 cyp4t8 (ENSLACG00000013282) cyp4t8 (ENSLACG00000013669) EFCAB14 (ENSLACG00000014039) #29 ATPAF1 (ENSLACG00000014427) #31 MOB3C (ENSLACG00000014783) #33 mknk1 (ENSLACG00000015271) TMEM275 (ENSLACG00000016222) #36 DMBX1 (ENSLACG00000017136) ENSLACG00000017333 uqcrh (ENSLACG00000017471) Actinopterygii DUPLICATION Actinopterygii ANCESTRAL SPECIES ENSGT00940000159889.a #22 Neopterygii ANCESTRAL SPECIES ENSGT00940000159889.a #22 Osteoglossocephalai ANCESTRAL SPECIES ENSGT00940000159889.a #22 Clupeocephala ANCESTRAL SPECIES ENSGT00940000159889.a #22 Otomorpha ANCESTRAL SPECIES ENSGT00940000159889.a #22 Clupeiformes ANCESTRAL SPECIES ENSGT00940000159889.a #22 Atlantic herring MODERN SPECIES 1 naprt (ENSCHAG00000008551) gna15.1 (ENSCHAG00000008604) ARHGAP39 (ENSCHAG00000008631) acbd6 (ENSCHAG00000008954) lhx4 (ENSCHAG00000009096) zbtb37 (ENSCHAG00000009125) ENSCHAG00000009145 lhx4 (ENSCHAG00000009165) ENSCHAG00000009194 chaf1a (ENSCHAG00000009206) ubxn6 (ENSCHAG00000009314) ENSCHAG00000009454 serpinc1 (ENSCHAG00000009469) stil (ENSCHAG00000009485) #21 stx6 (ENSCHAG00000009500) ENSCHAG00000009517 #22 ENSCHAG00000009534 ENSCHAG00000009538 PATJ (ENSCHAG00000009598) tm2d1 (ENSCHAG00000009973) ENSCHAG00000009983 nfia (ENSCHAG00000010009) frem1b (ENSCHAG00000010129) atpaf1 (ENSCHAG00000011148) #31 ENSCHAG00000011164 nrd1b (ENSCHAG00000011319) axdnd1 (ENSCHAG00000016051) nphs2 (ENSCHAG00000016200) ENSCHAG00000016216 FAM163A (ENSCHAG00000016272) RABGAP1L (ENSCHAG00000016305) Actinopterygii DUPLICATION Actinopterygii ANCESTRAL SPECIES 915 ENSGT00940000159889.b.a #22 ENSGT00940000154660.b #23 Neopterygii ANCESTRAL SPECIES 709 ENSGT00940000159889.b.a #22 ENSGT00940000154660.b #23 Osteoglossocephalai ANCESTRAL SPECIES 853 ENSGT00940000159889.b.a #22 ENSGT00940000154660.b #23 Clupeocephala ANCESTRAL SPECIES 773 ENSGT00940000159889.b.a #22 ENSGT00940000154660.b #23 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00940000159889.b.a #22 Acanthomorphata ANCESTRAL SPECIES ENSGT00940000159889.b.a #22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00940000159889.b.a #22 Percomorphaceae ANCESTRAL SPECIES ENSGT00940000159889.b.a #22 Percomorphaceae_B ANCESTRAL SPECIES 29 ENSGT00940000156750 ENSGT00530000063404.b ENSGT00940000155899.e.a ENSGT00940000156511.b ENSGT00940000165798 ENSGT00940000159323.b ENSGT00940000154149.b.b ENSGT00940000159571 ENSGT00390000010568 ENSGT01050000244887.A.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00390000007310 #21 ENSGT01050000244924.a.a.b.a.a ENSGT00940000160040.B.a.b ENSGT00940000159889.b.a #22 ENSGT00530000064649 ENSGT00940000165071 ENSGT00400000024256 ENSGT00390000018319.a.b.b.b.a.a ENSGT00940000175916 ENSGT00950000182964.a.b.b.a.a.b ENSGT00940000159915.a ENSGT00940000162978.b ENSGT00530000063749.c.a ENSGT00390000007991 ENSGT00940000161493 ENSGT00940000165051 ENSGT00940000166036 ENSGT00940000160231 ENSGT00940000159037 Ovalentaria ANCESTRAL SPECIES 26 ENSGT00530000063404.b ENSGT00940000155899.e.a ENSGT00940000156511.b.db ENSGT00940000159571 ENSGT00390000010568 ENSGT01050000244887.A.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00390000007310 #21 ENSGT01050000244924.a.a.b.a.a ENSGT00940000160040.B.a.b ENSGT00940000159889.b.a #22 ENSGT00530000064649 ENSGT00940000165071 ENSGT00400000024256 ENSGT00390000018319.a.b.b.b.a.a ENSGT00940000175916 ENSGT00950000182964.a.b.b.a.a.b ENSGT00940000159915.a ENSGT00940000162978.b ENSGT00530000063749.c.a ENSGT00390000007991 ENSGT00940000161493 ENSGT00940000165051 ENSGT00940000166036 ENSGT00940000160231 ENSGT00940000159037 Ovalentaria_B ANCESTRAL SPECIES 8 ENSGT00390000015332 ENSGT00940000156299 ENSGT00940000159676.a ENSGT00940000161734 ENSGT00550000074917 ENSGT00940000155981.h ENSGT00940000156037.a.e ENSGT00510000049120 ENSGT00940000156453.b ENSGT00390000011620.a.a.a ENSGT00550000074980 ENSGT00390000018402 ENSGT00390000005462 ENSGT00940000155060.C.a.b ENSGT00940000154930.eb ENSGT00940000159889.b.a #22 Pomacentridae ANCESTRAL SPECIES 14 ENSGT00940000156037.a.e ENSGT00510000049120 ENSGT00940000156453.b ENSGT00390000011620.a.a.a ENSGT00550000074980 ENSGT00390000018402 ENSGT00390000005462 ENSGT00940000155060.C.a.b ENSGT00940000154930.eb ENSGT00940000159889.b.a #22 ENSGT00530000063000.a.b.b ENSGT00940000154030.a.a ENSGT00940000153241.B.c ENSGT01030000234527.B ENSGT00950000182917.b.a.b ENSGT00940000156474.a.b.d ENSGT00940000157773 ENSGT00940000156970.c.b ENSGT00940000158597 ENSGT00940000164964.a.b ENSGT00940000160730 ENSGT00940000155119 ENSGT01080000257336.a.c.b ENSGT00940000159656.a.a ENSGT00730000112922 Bicolor damselfish MODERN SPECIES 353 ENSSPAG00000015471 ENSSPAG00000015526 ENSSPAG00000015548 SZT2 (ENSSPAG00000015570) hyi (ENSSPAG00000015691) ptprfa (ENSSPAG00000015750) ENSSPAG00000016117 ENSSPAG00000016146 ENSSPAG00000016245 #22 atg4b (ENSSPAG00000016249) dtymk (ENSSPAG00000016267) Pomacentridae_A ANCESTRAL SPECIES ENSGT00940000156299 ENSGT00940000159676.a ENSGT00940000161734 ENSGT00550000074917 ENSGT00940000155981.h ENSGT00940000156037.a.e ENSGT00510000049120 ENSGT00940000156453.b ENSGT00390000011620.a.a.a ENSGT00550000074980 ENSGT00390000018402 ENSGT00390000005462 ENSGT00940000155060.C.a.b ENSGT00940000154930.eb ENSGT00940000161131.a.b.b ENSGT00940000159889.b.a #22 ENSGT00530000063000.a.b.b ENSGT00940000154030.a.a ENSGT00940000153241.B.c ENSGT01030000234527.B ENSGT00950000182917.b.a.b ENSGT00940000156474.a.b.d ENSGT00940000157773 ENSGT00940000156970.c.b ENSGT00940000158597 ENSGT00940000164964.a.b ENSGT00940000160730 ENSGT00940000155119 ENSGT01080000257336.a.c.b ENSGT00940000159656.a.a ENSGT00730000112922 Amphiprion ANCESTRAL SPECIES 2 ENSGT00940000156299 ENSGT00940000159676.a ENSGT00940000161734 ENSGT00550000074917 ENSGT00940000155981.h ENSGT00940000156037.a.e ENSGT00510000049120 ENSGT00940000156453.b ENSGT00390000011620.a.a.a ENSGT00550000074980 ENSGT00390000018402 ENSGT00390000005462 ENSGT00940000155060.C.a.b ENSGT00940000154930.eb ENSGT00940000161131.a.b.b ENSGT00940000159889.b.a #22 ENSGT00530000063000.a.b.b ENSGT00940000154030.a.a ENSGT00940000153241.B.c ENSGT01030000234527.B ENSGT00950000182917.b.a.b ENSGT00940000156474.a.b.d ENSGT00940000157773 ENSGT00940000156970.c.b ENSGT00940000158597 ENSGT00940000164964.a.b ENSGT00940000160730 ENSGT00940000155119 ENSGT01080000257336.a.c.b ENSGT00940000159656.a.a ENSGT00730000112922 Orange clownfish MODERN SPECIES 11 b3gnt5a (ENSAPEG00000022611) MCF2L2 (ENSAPEG00000022398) ENSAPEG00000022377 rfc4 (ENSAPEG00000022344) cdh2 (ENSAPEG00000022295) aqp4 (ENSAPEG00000022269) ENSAPEG00000022261 ENSAPEG00000022236 ENSAPEG00000022230 ENSAPEG00000022211 SZT2 (ENSAPEG00000022110) hyi (ENSAPEG00000022066) ptprfa (ENSAPEG00000022015) ENSAPEG00000021875 ENSAPEG00000021835 ENSAPEG00000021829 #22 atg4b (ENSAPEG00000021619) dtymk (ENSAPEG00000021609) agxta (ENSAPEG00000021572) zgc:103559 (ENSAPEG00000021517) ttc39c (ENSAPEG00000021475) KIF1A (ENSAPEG00000021363) scly (ENSAPEG00000021323) ESPNL (ENSAPEG00000021310) KLHL30 (ENSAPEG00000021298) ENSAPEG00000021220 SNED1 (ENSAPEG00000021096) ryk (ENSAPEG00000021003) SLCO2A1 (ENSAPEG00000020924) rab6ba (ENSAPEG00000020892) im:7152348 (ENSAPEG00000020873) Clown anemonefish MODERN SPECIES 3043 ENSAOCG00000019531 #22 Spiny chromis MODERN SPECIES 441 ENSAPOG00000018192 #22 atg4b (ENSAPOG00000018253) dtymk (ENSAPOG00000018263) agxta (ENSAPOG00000018275) zgc:103559 (ENSAPOG00000018326) ttc39c (ENSAPOG00000018386) KIF1A (ENSAPOG00000018599) scly (ENSAPOG00000018636) ESPNL (ENSAPOG00000018643) KLHL30 (ENSAPOG00000018654) ENSAPOG00000018717 SNED1 (ENSAPOG00000018958) ryk (ENSAPOG00000019040) SLCO2A1 (ENSAPOG00000019060) rab6ba (ENSAPOG00000019100) im:7152348 (ENSAPOG00000019114) Cichlidae ANCESTRAL SPECIES 17 ENSGT00940000155981.h ENSGT00940000156037.a.e ENSGT00510000049120 ENSGT00940000156453.b ENSGT00390000011620.a.a.a ENSGT00550000074980 ENSGT00390000018402 ENSGT00390000005462 ENSGT00940000155060.C.a.b ENSGT00940000154930.eb ENSGT00940000159889.b.a #22 ENSGT00530000064649 ENSGT00940000165071 ENSGT00400000024256 ENSGT00390000018319.a.b.b.b.a.a ENSGT00940000175916 ENSGT00950000182964.a.b.b.a.a.a.a ENSGT00940000159915.a ENSGT00940000162978.b ENSGT00530000063749.c.a ENSGT00390000007991 ENSGT00940000161493 ENSGT00940000159037 ENSGT00940000160231 ENSGT00940000166036 ENSGT00940000165051 Midas cichlid MODERN SPECIES 1114 cdh2 (ENSACIG00000013175) aqp4 (ENSACIG00000013051) ENSACIG00000013030 ENSACIG00000012964 ENSACIG00000012937 DDX10 (ENSACIG00000012927) ENSACIG00000012919 SZT2 (ENSACIG00000012806) hyi (ENSACIG00000012771) ptprfa (ENSACIG00000012701) ENSACIG00000012669 ENSACIG00000012660 #22 ENSACIG00000012651 ENSACIG00000012583 ENSACIG00000012569 ENSACIG00000012552 CARTPT (ENSACIG00000012539) si:ch211-191a24.4 (ENSACIG00000012534) ENSACIG00000012457 ENSACIG00000012374 igfbp3 (ENSACIG00000012343) igfbp1a (ENSACIG00000011966) adcy1a (ENSACIG00000011899) sirt5 (ENSACIG00000011788) PHACTR1 (ENSACIG00000011754) tbc1d7 (ENSACIG00000011735) DSP (ENSACIG00000011497) Pseudocrenilabrinae ANCESTRAL SPECIES 6 ENSGT00940000155981.h ENSGT00940000156037.a.e ENSGT00510000049120 ENSGT00940000156453.b ENSGT00390000011620.a.a.a ENSGT00550000074980 ENSGT00390000018402 ENSGT00390000005462 ENSGT00940000155060.C.a.b ENSGT00940000154930.eb ENSGT00940000159889.b.a #22 ENSGT00530000064649 ENSGT00940000165071 ENSGT00400000024256 ENSGT00390000018319.a.b.b.b.a.a ENSGT00940000175916 ENSGT00950000182964.a.b.b.a.a.a.b.a ENSGT00950000182964.a.b.b.a.a.a.b.b ENSGT00950000182964.a.b.b.a.a.a.a ENSGT00940000159915.a ENSGT00940000162978.b ENSGT00530000063749.c.a ENSGT00390000007991 ENSGT00940000161493 ENSGT00940000159037 ENSGT00940000160231 Pseudocrenilabrinae_A ANCESTRAL SPECIES 3 ENSGT00980000198690.a ENSGT00730000111696.a ENSGT00940000156557.g ENSGT01090000260051.b.b.dc.a ENSGT00950000183138.a.b.r.a ENSGT00940000155981.h ENSGT00940000156037.a.e ENSGT00510000049120 ENSGT00940000156453.b ENSGT00390000011620.a.a.a ENSGT00550000074980 ENSGT00390000018402 ENSGT00390000005462 ENSGT00940000155060.C.a.b ENSGT00940000154930.eb ENSGT00940000159889.b.a #22 ENSGT00530000064649 ENSGT00940000165071 ENSGT00400000024256 ENSGT00390000018319.a.b.b.b.a.a ENSGT00940000175916 ENSGT00950000182964.a.b.b.a.a.a.b.a ENSGT00950000182964.a.b.b.a.a.a.b.b ENSGT00950000182964.a.b.b.a.a.a.a ENSGT00940000159915.a ENSGT00940000162978.b ENSGT00530000063749.c.a ENSGT00390000007991 ENSGT00940000161493 ENSGT00940000159037 ENSGT00940000160231 Haplochromini ANCESTRAL SPECIES 23 ENSGT00730000111696.a ENSGT00940000156557.g.e ENSGT01090000260051.b.b.dc.a ENSGT00950000183138.a.b.r.a ENSGT00940000155981.h ENSGT00940000156037.a.e ENSGT00510000049120 ENSGT00940000156453.b ENSGT00390000011620.a.a.a ENSGT00550000074980 ENSGT00390000018402 ENSGT00390000005462 ENSGT00940000155060.C.b.kb.d.b ENSGT00940000155060.C.a.b ENSGT00940000154930.eb ENSGT00940000159889.b.a #22 ENSGT00530000064649 ENSGT00940000165071 ENSGT00400000024256 ENSGT00390000018319.a.b.b.b.a.a ENSGT00940000175916 ENSGT00950000182964.a.b.b.a.a.a.b.a ENSGT00950000182964.a.b.b.a.a.a.b.b ENSGT00950000182964.a.b.b.a.a.a.a ENSGT00940000159915.a ENSGT00940000162978.b ENSGT00530000063749.c.a ENSGT00390000007991 ENSGT00940000161493 ENSGT00940000159037 ENSGT00940000160231 Burton s mouthbrooder MODERN SPECIES 325 cdh2 (ENSHBUG00000012367) aqp4 (ENSHBUG00000012407) ENSHBUG00000012414 TAF4B (ENSHBUG00000000352) DDX10 (ENSHBUG00000012476) ENSHBUG00000012494 SZT2 (ENSHBUG00000012648) hyi (ENSHBUG00000012676) ptprfa (ENSHBUG00000012811) ENSHBUG00000001041 ENSHBUG00000012849 #22 ENSHBUG00000012862 camk4 (ENSHBUG00000000371) ENSHBUG00000012884 CARTPT (ENSHBUG00000012900) GADD45B (ENSHBUG00000012913) DIRAS1 (ENSHBUG00000012919) ENSHBUG00000012933 APC2 (ENSHBUG00000012944) ENSHBUG00000012979 reep6 (ENSHBUG00000012992) sgta (ENSHBUG00000013036) SLC39A3 (ENSHBUG00000013051) si:ch1073-67j19.2 (ENSHBUG00000013066) ENSHBUG00000013094 zgc:113223 (ENSHBUG00000001127) Haplochromini_A ANCESTRAL SPECIES 26 ENSGT00730000111696.a ENSGT00940000156557.g.e ENSGT01090000260051.b.b.dc.a ENSGT00950000183138.a.b.r.a ENSGT00940000155981.h ENSGT00940000156037.a.e ENSGT00510000049120 ENSGT00940000156453.b ENSGT00390000011620.a.a.a ENSGT00550000074980 ENSGT00390000018402 ENSGT00390000005462 ENSGT00940000155060.C.b.kb.d.b ENSGT00940000155060.C.a.b ENSGT00940000154930.eb ENSGT00940000159889.b.a #22 ENSGT00530000064649 ENSGT00940000165071 ENSGT00400000024256 ENSGT00390000018319.a.b.b.b.a.a ENSGT00940000175916 ENSGT00950000182964.a.b.b.a.a.a.b.a ENSGT00950000182964.a.b.b.a.a.a.b.b ENSGT00950000182964.a.b.b.a.a.a.a ENSGT00940000159915.a ENSGT00530000063749.c.a ENSGT00390000007991 ENSGT00940000161493 ENSGT00940000159037 ENSGT00940000160231 ENSGT01030000234852 Haplochromini_B ANCESTRAL SPECIES 29 ENSGT00940000176853.A ENSGT01090000260051.b.b.dc.a ENSGT00950000183138.a.b.r.a ENSGT00940000156258.f.a.a.a ENSGT00940000155981.h ENSGT00940000156037.a.e ENSGT00510000049120 ENSGT00940000156453.b ENSGT00390000011620.a.a.a ENSGT00550000074980 ENSGT00390000018402 ENSGT00390000005462 ENSGT00940000155060.C.b.kb.d.b ENSGT00940000155060.C.a.b ENSGT00940000154930.eb ENSGT00940000159889.b.a #22 ENSGT00530000064649 ENSGT00940000165071 ENSGT00400000024256 ENSGT00390000018319.a.b.b.b.a.a ENSGT00940000175916 ENSGT00950000182964.a.b.b.a.a.a.b.a ENSGT00950000182964.a.b.b.a.a.a.b.b ENSGT00950000182964.a.b.b.a.a.a.a ENSGT00940000159915.a ENSGT00530000063749.c.a ENSGT00390000007991 ENSGT00940000161493 ENSGT00940000159037 ENSGT00940000160231 ENSGT01030000234852 Zebra mbuna MODERN SPECIES 1097 ENSMZEG00005003811 eef1b2 (ENSMZEG00005003788) ENSMZEG00005003773 cd59 (ENSMZEG00005003755) ENSMZEG00005003726 ENSMZEG00005003708 ENSMZEG00005003642 ENSMZEG00005003611 DDX10 (ENSMZEG00005003586) ENSMZEG00005003575 SZT2 (ENSMZEG00005003433) hyi (ENSMZEG00005003394) ENSMZEG00005003341 ptprfa (ENSMZEG00005003235) ENSMZEG00005003207 ENSMZEG00005003191 #22 ENSMZEG00005003176 ENSMZEG00005003162 ENSMZEG00005003146 CARTPT (ENSMZEG00005003127) ENSMZEG00005003112 ENSMZEG00005003101 ENSMZEG00005003065 GADD45B (ENSMZEG00005003049) DIRAS1 (ENSMZEG00005003036) APC2 (ENSMZEG00005003023) ENSMZEG00005003014 reep6 (ENSMZEG00005003003) sgta (ENSMZEG00005002995) SLC39A3 (ENSMZEG00005002970) si:ch1073-67j19.2 (ENSMZEG00005002956) Eastern happy MODERN SPECIES 6 ENSACLG00000003662 ENSACLG00000003657 ENSACLG00000003650 cdh2 (ENSACLG00000003613) aqp4 (ENSACLG00000003595) ENSACLG00000003585 ENSACLG00000003572 DDX10 (ENSACLG00000003559) ENSACLG00000003535 SZT2 (ENSACLG00000003431) hyi (ENSACLG00000003405) ENSACLG00000003396 ENSACLG00000003388 ptprfa (ENSACLG00000003205) ENSACLG00000002940 ENSACLG00000002894 #22 ENSACLG00000002889 ENSACLG00000002882 ENSACLG00000002871 CARTPT (ENSACLG00000002852) ENSACLG00000002833 ENSACLG00000002817 ENSACLG00000002727 GADD45B (ENSACLG00000002682) DIRAS1 (ENSACLG00000002670) APC2 (ENSACLG00000002604) ENSACLG00000002397 reep6 (ENSACLG00000002380) sgta (ENSACLG00000002343) SLC39A3 (ENSACLG00000002335) ENSACLG00000002294 P. nyererei MODERN SPECIES 356 mlpha (ENSPNYG00000002012) ENSPNYG00000001993 ENSPNYG00000001972 cdh2 (ENSPNYG00000001907) aqp4 (ENSPNYG00000001878) ENSPNYG00000001861 ENSPNYG00000001803 ENSPNYG00000001771 DDX10 (ENSPNYG00000001756) ENSPNYG00000001746 SZT2 (ENSPNYG00000001578) hyi (ENSPNYG00000001535) ptprfa (ENSPNYG00000001412) ENSPNYG00000001388 ENSPNYG00000001382 ENSPNYG00000001376 #22 ENSPNYG00000001370 ENSPNYG00000001304 ENSPNYG00000001293 CARTPT (ENSPNYG00000001282) ENSPNYG00000001014 GADD45B (ENSPNYG00000000960) DIRAS1 (ENSPNYG00000000903) APC2 (ENSPNYG00000000800) ENSPNYG00000000789 reep6 (ENSPNYG00000000719) sgta (ENSPNYG00000000676) SLC39A3 (ENSPNYG00000000660) si:ch1073-67j19.2 (ENSPNYG00000000644) ENSPNYG00000000622 zgc:113223 (ENSPNYG00000000599) Nile tilapia MODERN SPECIES 6 ENSONIG00000035900 ENSONIG00000029973 ENSONIG00000033563 mlpha (ENSONIG00000019158) trim63a (ENSONIG00000019157) ACKR3 (ENSONIG00000021186) ENSONIG00000019156 ENSONIG00000027434 ENSONIG00000041358 snx9a (ENSONIG00000019151) ENSONIG00000028549 ENSONIG00000031429 hyi (ENSONIG00000007269) ptprfa (ENSONIG00000007270) ENSONIG00000007297 ENSONIG00000040774 #22 fam174c (ENSONIG00000032252) ENSONIG00000007301 ENSONIG00000036230 CARTPT (ENSONIG00000028614) ENSONIG00000036611 GADD45B (ENSONIG00000007304) GADD45B (ENSONIG00000007306) DIRAS1 (ENSONIG00000007308) ENSONIG00000031003 APC2 (ENSONIG00000041311) ENSONIG00000007313 reep6 (ENSONIG00000007314) sgta (ENSONIG00000007316) SLC39A3 (ENSONIG00000007317) si:ch1073-67j19.2 (ENSONIG00000030816) Atherinomorphae ANCESTRAL SPECIES 7 ENSGT00530000063646.a ENSGT00950000182946.lb.b.g ENSGT00730000111085.A ENSGT00530000063498.B ENSGT00530000063404.b ENSGT00940000155899.e.a ENSGT00940000156511.b.db ENSGT00940000159571 ENSGT00390000010568 ENSGT01050000244887.A.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00390000007310 #21 ENSGT01050000244924.a.a.b.a.a ENSGT00940000160040.B.a.b ENSGT00940000159889.b.a #22 ENSGT00530000064649 ENSGT00940000165071 ENSGT00400000024256 ENSGT00390000018319.a.b.b.b.a.a ENSGT00940000175916 ENSGT00950000182964.a.b.b.a.a.b ENSGT00940000159915.a ENSGT00940000162978.b ENSGT00530000063749.c.a ENSGT00390000007991 ENSGT00940000161493 Oryzias ANCESTRAL SPECIES 5 ENSGT00530000063646.a ENSGT00950000182946.lb.b.g.u ENSGT00730000111085.A ENSGT00530000063498.B ENSGT00530000063404.b ENSGT00940000155899.e.a ENSGT00940000169015 ENSGT00940000159571 ENSGT00390000010568 ENSGT01050000244887.A.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00390000007310 #21 ENSGT01050000244924.a.a.b.a.a ENSGT00940000160040.B.a.b ENSGT00940000159889.b.a #22 ENSGT00530000064649 ENSGT00940000165071 ENSGT00400000024256 ENSGT00530000063861.b.b ENSGT00940000166414 ENSGT00940000156233.tb ENSGT00940000164497 ENSGT00390000008285 ENSGT00390000018446.a ENSGT00940000156166.a.i.b ENSGT00940000153846.a.a ENSGT00950000183210.g.a ENSGT00390000006452.b.b.g ENSGT00940000153190.A.h ENSGT00940000155412.a.b Oryzias_b ANCESTRAL SPECIES 26 ENSGT01000000218883 ENSGT00530000063404.b ENSGT00940000155899.e.a ENSGT00940000169015 ENSGT00940000159571 ENSGT00390000010568 ENSGT01050000244887.A.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00390000007310 #21 ENSGT01050000244924.a.a.b.a.a ENSGT00940000160040.B.a.b ENSGT00940000159889.b.a #22 ENSGT00530000064649 ENSGT00940000165071 ENSGT00400000024256 ENSGT00530000063861.b.b ENSGT00940000166414 ENSGT00940000156233.tb ENSGT00940000154382.a.a ENSGT00940000164497 ENSGT00390000008285 ENSGT00390000018446.a ENSGT00940000156166.a.i.b ENSGT00940000153846.a.a ENSGT00950000183210.g.a ENSGT00390000006452.b.b.g ENSGT00940000153190.A.h Indian medaka MODERN SPECIES 3 si:ch211-165i18.2 (ENSOMEG00000007309) ENSOMEG00000007280 ENSOMEG00000007264 ENSOMEG00000007256 rtca (ENSOMEG00000000756) cdc14ab (ENSOMEG00000007218) ENSOMEG00000007157 slc30a7 (ENSOMEG00000007094) dph5 (ENSOMEG00000007053) s1pr1 (ENSOMEG00000007026) zbtb37 (ENSOMEG00000007001) serpinc1 (ENSOMEG00000006990) stil (ENSOMEG00000006964) #21 PTBP1 (ENSOMEG00000006933) ENSOMEG00000006867 ENSOMEG00000006859 #22 ENSOMEG00000006847 angpt1 (ENSOMEG00000006835) sdc2 (ENSOMEG00000006806) ENSOMEG00000006779 tpmt.1 (ENSOMEG00000006741) ENSOMEG00000006727 zgc:114119 (ENSOMEG00000006693) anxa14 (ENSOMEG00000006657) ENSOMEG00000006630 ENSOMEG00000006604 ENSOMEG00000006585 ENSOMEG00000006525 cdca8 (ENSOMEG00000006469) c19h1orf109 (ENSOMEG00000006433) ENSOMEG00000006427 Javanese ricefish MODERN SPECIES 18 hdlbpa (ENSOJAG00000002410) SOX14 (ENSOJAG00000002294) HS2ST1 (ENSOJAG00000002278) lmo4b (ENSOJAG00000002259) rtca (ENSOJAG00000002213) cdc14ab (ENSOJAG00000002135) ENSOJAG00000002079 slc30a7 (ENSOJAG00000002038) dph5 (ENSOJAG00000002020) s1pr1 (ENSOJAG00000002009) zbtb37 (ENSOJAG00000001993) serpinc1 (ENSOJAG00000001862) ENSOJAG00000001833 #21 PTBP1 (ENSOJAG00000001386) ENSOJAG00000001280 ENSOJAG00000001272 #22 ENSOJAG00000001270 ENSOJAG00000001206 ENSOJAG00000001182 ENSOJAG00000001177 ENSOJAG00000001175 ENSOJAG00000001173 orc1 (ENSOJAG00000001168) prpf38a (ENSOJAG00000001163) ENSOJAG00000001158 ENSOJAG00000001156 ENSOJAG00000001148 TRMT1L (ENSOJAG00000001049) niban1a (ENSOJAG00000001008) ntmt2 (ENSOJAG00000000993) gorab (ENSOJAG00000000989) Oryzias_a ANCESTRAL SPECIES 91 ENSGT00940000159571 ENSGT00390000010568 ENSGT01050000244887.A.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00390000007310 #21 ENSGT01050000244924.a.a.b.a.a.i ENSGT00940000160040.B.a.b ENSGT00940000159889.b.a #22 ENSGT00530000064649 ENSGT00940000165071 ENSGT00400000024256 ENSGT00530000063861.b.b ENSGT00940000166414 ENSGT00940000156233.tb ENSGT00940000164497 ENSGT00390000008285 ENSGT00390000018446.a ENSGT00940000156166.a.i.b ENSGT00940000153846.a.a ENSGT00950000183210.g.a ENSGT00390000006452.b.b.g ENSGT00940000153190.A.h ENSGT00940000155412.a.b Japanese Medaka HdrR MODERN SPECIES 18 scp2b (ENSORLG00000029625) ENSORLG00000022404 ENSORLG00000014225 med8 (ENSORLG00000014187) aldh9a1a.1 (ENSORLG00000014167) tmco1 (ENSORLG00000025870) vcam1b (ENSORLG00000014149) slc30a7 (ENSORLG00000014132) dph5 (ENSORLG00000014112) s1pr1 (ENSORLG00000014096) zbtb37 (ENSORLG00000014087) ENSORLG00000028536 PTBP1 (ENSORLG00000014019) ENSORLG00000029404 ENSORLG00000030375 ENSORLG00000013953 #22 ENSORLG00000027163 ENSORLG00000013945 ENSORLG00000013940 tgfbr3 (ENSORLG00000013933) ENSORLG00000013915 EPHX4 (ENSORLG00000013865) ENSORLG00000027069 C1orf146 (ENSORLG00000021853) glmnb (ENSORLG00000013840) gfi1ab (ENSORLG00000013806) EVI5 (ENSORLG00000013797) rpl5b (ENSORLG00000013764) DIPK1A (ENSORLG00000013740) ENSORLG00000022156 zgc:109982 (ENSORLG00000013730) Chinese medaka MODERN SPECIES 111 s1pr1 (ENSOSIG00000022415) dph5 (ENSOSIG00000022413) zbtb37 (ENSOSIG00000022411) serpinc1 (ENSOSIG00000022410) ENSOSIG00000022405 #21 PTBP1 (ENSOSIG00000022398) ENSOSIG00000022396 #22 ENSOSIG00000022395 ENSOSIG00000022256 ENSOSIG00000022201 tgfbr3 (ENSOSIG00000022198) brdt (ENSOSIG00000022192) EPHX4 (ENSOSIG00000022184) ENSOSIG00000022180 ENSOSIG00000022172 C1orf146 (ENSOSIG00000022168) glmnb (ENSOSIG00000022163) gfi1ab (ENSOSIG00000022161) EVI5 (ENSOSIG00000021459) rpl5b (ENSOSIG00000021413) DIPK1A (ENSOSIG00000021405) zgc:109982 (ENSOSIG00000021400) Cyprinodontiformes ANCESTRAL SPECIES 7 ENSGT00530000063646.a ENSGT00950000182946.lb.b.g.x ENSGT00730000111085.A ENSGT00530000063498.B ENSGT00530000063404.b ENSGT00940000155899.e.a ENSGT00940000169015 ENSGT00940000159571 ENSGT00390000010568 ENSGT01050000244887.A.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00390000007310 #21 ENSGT01050000244924.a.a.b.a.a ENSGT00940000160040.B.a.b ENSGT00940000159889.b.a #22 ENSGT00530000064649 ENSGT00940000165071 ENSGT00400000024256 ENSGT00390000018319.a.b.b.b.a.a ENSGT00940000175916 ENSGT00950000182964.a.b.b.a.a.b ENSGT00940000159915.a ENSGT00940000162978.b ENSGT00530000063749.c.a ENSGT00390000007991 ENSGT00940000161493 ENSGT00950000182946.lb.b.h ENSGT00940000159127 ENSGT00940000156988 ENSGT00940000153837.a.a Cyprinodontoidei ANCESTRAL SPECIES 43 ENSGT00530000063646.a ENSGT00950000182946.lb.b.g.x ENSGT00730000111085.A ENSGT00530000063498.B ENSGT00530000063404.b ENSGT00940000155899.e.a ENSGT00940000169015 ENSGT00940000159571 ENSGT00390000010568 ENSGT01050000244887.A.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00390000007310 #21 ENSGT01050000244924.a.a.b.a.a ENSGT00940000160040.B.a.b ENSGT00940000159889.b.a #22 ENSGT00530000064649 ENSGT00940000165071 ENSGT00400000024256 ENSGT00390000018319.a.b.b.b.a.a ENSGT00940000175916 ENSGT00950000182964.a.b.b.a.a.b ENSGT00940000159915.a ENSGT00940000162978.b ENSGT00530000063749.c.a ENSGT00390000007991 ENSGT00940000161493 ENSGT00950000182946.lb.b.h ENSGT00940000159127 ENSGT00940000156988 NAME_4 ANCESTRAL SPECIES ENSGT00940000159889.b.a #22 Sheepshead minnow MODERN SPECIES 1654 ENSCVAG00000022502 #22 ENSCVAG00000022538 ENSCVAG00000022545 CARTPT (ENSCVAG00000022556) Poeciliinae ANCESTRAL SPECIES 7 ENSGT00950000182946.lb.b.g.x ENSGT00730000111085.A ENSGT00950000183052.b.c.b.b.b.a.b.a ENSGT00530000063498.B ENSGT00530000063404.b ENSGT00940000155899.e.a ENSGT00940000156511.b.db ENSGT00940000159571 ENSGT00390000010568 ENSGT01050000244887.A.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00390000007310 #21 ENSGT01050000244924.a.a.b.a.a ENSGT00940000160040.B.a.b ENSGT00940000159889.b.a #22 ENSGT00530000064649 ENSGT00940000165071 ENSGT00400000024256 ENSGT00390000018319.a.b.b.b.a.a ENSGT00940000175916 ENSGT00950000182964.a.b.b.a.a.b ENSGT00940000159915.a ENSGT00940000162978.b ENSGT00530000063749.c.a ENSGT00390000007991 ENSGT00940000161493 ENSGT00950000182946.lb.b.h ENSGT00940000159127 ENSGT00940000156988 ENSGT00940000166148 Poecilia ANCESTRAL SPECIES 1 ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.b.b.b.b.a ENSGT01100000263520.a.a.a.a.b.b.a.a.b.b ENSGT00950000183052.b.c.b.b.b.a.b.a ENSGT00530000063498.B ENSGT00530000063404.b ENSGT00940000155899.e.a ENSGT00940000156511.b.db ENSGT00940000159571 ENSGT00390000010568 ENSGT01050000244887.A.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00390000007310 #21 ENSGT01050000244924.a.a.b.a.a.g ENSGT00940000160040.B.a.b ENSGT00940000159889.b.a #22 ENSGT00530000064649 ENSGT00940000165071 ENSGT00400000024256 ENSGT00390000018319.a.b.b.b.a.a ENSGT00940000175916 ENSGT00950000182964.a.b.b.a.a.b ENSGT00940000158196 ENSGT00940000159915.a ENSGT00940000162978.b ENSGT00530000063749.c.a ENSGT00390000007991 ENSGT00940000161493 ENSGT00950000182946.lb.b.h ENSGT00940000159127 ENSGT00940000156988 Guppy MODERN SPECIES 456 ENSPREG00000001766 ENSPREG00000001743 ENSPREG00000001713 ENSPREG00000001441 ENSPREG00000001413 orc1 (ENSPREG00000001380) rtca (ENSPREG00000001365) ENSPREG00000001351 vcam1b (ENSPREG00000001302) dph5 (ENSPREG00000001262) s1pr1 (ENSPREG00000001253) zbtb37 (ENSPREG00000001239) serpinc1 (ENSPREG00000001033) ENSPREG00000000976 #21 ENSPREG00000000963 ENSPREG00000000949 #22 fam174c (ENSPREG00000000932) ENSPREG00000000894 ENSPREG00000000887 CARTPT (ENSPREG00000000867) gadd45ba (ENSPREG00000000843) ENSPREG00000000829 APC2 (ENSPREG00000000736) ENSPREG00000000717 reep6 (ENSPREG00000000699) ENSPREG00000000684 gpx7 (ENSPREG00000000663) ENSPREG00000000633 ENSPREG00000000596 comp (ENSPREG00000000551) tmem38a (ENSPREG00000000545) NAME_6 ANCESTRAL SPECIES 226 ENSGT00940000160040.B.a.b ENSGT00940000159889.b.a #22 ENSGT00530000064649 ENSGT00940000165071 ENSGT00400000024256 ENSGT00390000018319.a.b.b.b.a.a ENSGT00940000175916 ENSGT00950000182964.a.b.b.a.a.b ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.a.a.b.a ENSGT00940000159915.a ENSGT00940000162978.b ENSGT00530000063749.c.a ENSGT00390000007991 ENSGT00940000161493 ENSGT00950000182946.lb.b.h ENSGT00940000159127 ENSGT00940000156988 Sailfin molly MODERN SPECIES 1549 ENSPLAG00000007819 ENSPLAG00000007840 #22 fam174c (ENSPLAG00000007844) ENSPLAG00000007873 Platyfish MODERN SPECIES 23 ENSXMAG00000022711 ENSXMAG00000019797 orc1 (ENSXMAG00000013015) rtca (ENSXMAG00000005482) cdc14ab (ENSXMAG00000005497) vcam1b (ENSXMAG00000005525) slc30a7 (ENSXMAG00000021227) dph5 (ENSXMAG00000026608) s1pr1 (ENSXMAG00000019798) zbtb37 (ENSXMAG00000005565) serpinc1 (ENSXMAG00000005566) ENSXMAG00000024506 ENSXMAG00000021807 #21 PTBP1 (ENSXMAG00000005582) EFNA2 (ENSXMAG00000005617) ENSXMAG00000027113 #22 ENSXMAG00000026908 ENSXMAG00000013029 ENSXMAG00000021596 CARTPT (ENSXMAG00000013032) gadd45ba (ENSXMAG00000013033) DIRAS1 (ENSXMAG00000028296) APC2 (ENSXMAG00000028417) ENSXMAG00000000789 ENSXMAG00000000767 reep6 (ENSXMAG00000025038) ENSXMAG00000023010 ENSXMAG00000029250 ENSXMAG00000000751 comp (ENSXMAG00000000733) tmem38a (ENSXMAG00000029557) Aplocheiloidei ANCESTRAL SPECIES 169 ENSGT00730000111085.A ENSGT00530000063498.B ENSGT00530000063404.b ENSGT00940000155899.e.a ENSGT00940000169015 ENSGT00940000159571 ENSGT00390000010568 ENSGT01050000244887.A.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00390000007310 #21 ENSGT01050000244924.a.a.b.a.a ENSGT00940000160040.B.a.b ENSGT00940000159889.b.a #22 ENSGT00530000064649 ENSGT00940000165071 Turquoise killifish MODERN SPECIES 1626 GADD45BA (ENSNFUG00015023788) APC2 (ENSNFUG00015023790) ENSNFUG00015023791 ENSNFUG00015023795 ENSNFUG00015023797 Nfu_g_1_002654 (ENSNFUG00015023798) reep6 (ENSNFUG00015023808) gpx7 (ENSNFUG00015005197) ZCCHC11 (ENSNFUG00015005260) ENSNFUG00015005605 ENSNFUG00015005609 ENSNFUG00015005614 #22 C19ORF24 (ENSNFUG00015005617) EFNA2 (ENSNFUG00015005624) ptbp1b (ENSNFUG00015005690) stil (ENSNFUG00015006070) #21 serpinc1 (ENSNFUG00015006091) ZBTB37 (ENSNFUG00015006096) S1PR1 (ENSNFUG00015006101) dph5 (ENSNFUG00015006128) slc30a7 (ENSNFUG00015006167) vcam1b (ENSNFUG00015006267) ENSNFUG00015006280 ENSNFUG00015006281 RHPN1 (ENSNFUG00015006306) ATPAF1 (ENSNFUG00015006418) #31 mafaa (ENSNFUG00015006431) Mangrove rivulus MODERN SPECIES 362 ENSKMAG00000006563 prpf38a (ENSKMAG00000006588) orc1 (ENSKMAG00000006613) rtca (ENSKMAG00000006651) cdc14ab (ENSKMAG00000006669) ENSKMAG00000006714 slc30a7 (ENSKMAG00000006768) dph5 (ENSKMAG00000006827) s1pr1 (ENSKMAG00000006837) zbtb37 (ENSKMAG00000006848) serpinc1 (ENSKMAG00000006864) stil (ENSKMAG00000006896) #21 PTBP1 (ENSKMAG00000007025) ENSKMAG00000007093 ENSKMAG00000007104 #22 ENSKMAG00000007120 ENSKMAG00000007140 Percomorphaceae_C ANCESTRAL SPECIES 8 ENSGT00940000156750 ENSGT00530000063404.b ENSGT00940000155899.e.a ENSGT00940000156511.b ENSGT00940000165798 ENSGT00940000159323.b ENSGT00940000154149.b.b ENSGT00940000159571 ENSGT00390000010568 ENSGT01050000244887.A.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00390000007310 #21 ENSGT01050000244924.a.a.b.a.a ENSGT00940000160040.B.a.b ENSGT00940000159889.b.a #22 ENSGT00530000064649 ENSGT00940000165071 ENSGT00400000024256 ENSGT00390000018319.a.b.b.b.a.a ENSGT00940000175916 ENSGT00950000182964.a.b.b.a.a.b ENSGT00940000159915.a ENSGT00530000063749.c.a ENSGT00940000162978.b ENSGT00390000007991 ENSGT00940000161493 ENSGT00940000165051 ENSGT00940000166036 ENSGT00940000160231 ENSGT00940000159037 Eupercaria ANCESTRAL SPECIES 32 ENSGT00940000156750 ENSGT00530000063404.b ENSGT00940000155899.e.a ENSGT00940000156511.b ENSGT00940000165798 ENSGT00940000159323.b ENSGT00970000193390.c.b.a ENSGT00940000159571 ENSGT00390000010568 ENSGT01050000244887.A.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00390000007310 #21 ENSGT01050000244924.a.a.b.a.a ENSGT00940000160040.B.a.b ENSGT00940000159889.b.a #22 ENSGT00530000064649 ENSGT00940000160006 ENSGT00980000203233 ENSGT00940000165071 ENSGT00400000024256 Tetraodontidae ANCESTRAL SPECIES 5 ENSGT00530000063498.B ENSGT00940000159943 ENSGT00940000155026.d ENSGT00950000183171.A.b.a.b ENSGT00940000159037 ENSGT00940000160231 ENSGT00940000166036 ENSGT00940000165051 ENSGT00940000161493 ENSGT00390000007991 ENSGT00940000160616 ENSGT00940000157967 ENSGT00390000007310 #21 ENSGT01050000244924.a.a.b.a.a ENSGT00940000160040.B.a.b ENSGT00940000159889.b.a #22 ENSGT00530000064649 ENSGT00940000160006 ENSGT00400000024256 ENSGT01050000244887.A.a.b ENSGT00390000010568 ENSGT00940000159571 ENSGT00940000169015 ENSGT00940000155899.e.a ENSGT00530000063404.b ENSGT00940000156750 ENSGT00940000158998 ENSGT00390000003182 ENSGT00940000160221.c ENSGT00940000160580.a ENSGT00940000167285 Fugu MODERN SPECIES 12 ENSTRUG00000024309 thop1 (ENSTRUG00000011770) sgta (ENSTRUG00000011490) SLC39A3 (ENSTRUG00000011464) ENSTRUG00000026827 ENSTRUG00000011065 zgc:113223 (ENSTRUG00000010996) reep6 (ENSTRUG00000010913) ENSTRUG00000022750 gadd45ba (ENSTRUG00000010851) ENSTRUG00000010776 serpinc1 (ENSTRUG00000010570) ENSTRUG00000010492 #21 PTBP1 (ENSTRUG00000010168) EFNA2 (ENSTRUG00000010081) ENSTRUG00000029149 #22 ENSTRUG00000032786 camk4 (ENSTRUG00000009868) ENSTRUG00000033131 ENSTRUG00000033255 s1pr1 (ENSTRUG00000009829) dph5 (ENSTRUG00000031676) slc30a7 (ENSTRUG00000009545) ENSTRUG00000009528 cdc14ab (ENSTRUG00000008981) rtca (ENSTRUG00000008799) dbt (ENSTRUG00000008620) lrrc39 (ENSTRUG00000008499) trmt13 (ENSTRUG00000008400) ENSTRUG00000029933 palm1a (ENSTRUG00000008119) Eupecaria_A ANCESTRAL SPECIES 32 ENSGT00940000156750 ENSGT00530000063404.b ENSGT00940000155899.e.a ENSGT00940000156511.b ENSGT00940000165798 ENSGT00940000159323.b ENSGT00970000193390.c.b.a ENSGT00940000159571 ENSGT00390000010568 ENSGT01050000244887.A.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00390000007310 #21 ENSGT01050000244924.a.a.b.a.a ENSGT00940000160040.B.a.b ENSGT00940000159889.b.a #22 ENSGT00530000064649 ENSGT00940000160006 ENSGT00980000203233 ENSGT00940000165071 ENSGT00400000024256 Eupecaria_B ANCESTRAL SPECIES 32 ENSGT00940000160221.c ENSGT00390000003182 ENSGT00940000158998 ENSGT00940000156750 ENSGT00530000063404.b ENSGT00940000155899.e.a ENSGT00940000169015 ENSGT00940000159571 ENSGT00390000010568 ENSGT01050000244887.A.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00390000007310 #21 ENSGT01050000244924.a.a.b.a.a ENSGT00940000160040.B.a.b ENSGT00940000159889.b.a #22 ENSGT00530000064649 ENSGT00940000160006 ENSGT00940000165071 ENSGT00400000024256 Eupecaria_C ANCESTRAL SPECIES 4 ENSGT00940000159037 ENSGT00940000160231 ENSGT00940000166036 ENSGT00940000165051 ENSGT00940000161493 ENSGT00390000007991 ENSGT00940000162978.b ENSGT00530000063749.c.a ENSGT00940000159915.a ENSGT00950000182964.a.b.b.a.a.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00390000007310 #21 ENSGT01050000244924.a.a.b.a.a ENSGT00940000160040.B.a.b ENSGT00940000159889.b.a #22 ENSGT00530000064649 ENSGT00940000160006 ENSGT00940000165071 ENSGT00400000024256 ENSGT00940000175916 ENSGT01050000244887.A.a.b ENSGT00390000010568 ENSGT00940000159571 ENSGT00940000180146 ENSGT00940000155899.e.a ENSGT00530000063404.b ENSGT00940000156750 ENSGT00940000158998 ENSGT00390000003182 ENSGT00940000160221.c Eupercaria_incertae_sedis ANCESTRAL SPECIES 3 ENSGT00940000159037 ENSGT00940000160231 ENSGT00940000166036 ENSGT00940000165051 ENSGT00940000161493 ENSGT00390000007991 ENSGT00940000162978.b ENSGT00530000063749.c.a ENSGT00940000159915.a ENSGT00950000182964.a.b.b.a.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00390000007310 #21 ENSGT01050000244924.a.a.b.a.a ENSGT00940000160040.B.a.b ENSGT00940000159889.b.a #22 ENSGT00530000064649 ENSGT00940000160006 ENSGT00940000165071 ENSGT00400000024256 ENSGT00940000175916 ENSGT01050000244887.A.a.b ENSGT00390000010568 ENSGT00940000159571 ENSGT00940000155899.e.a ENSGT00530000063404.b ENSGT00940000156750 ENSGT00940000158998 ENSGT00390000003182 ENSGT00940000160221.c ENSGT00940000160580.a Large yellow croaker DUPLICATION Large yellow croaker MODERN SPECIES 485 efnb3b (ENSLCRG00005015465) wrap53 (ENSLCRG00005015467) GIGYF1 (ENSLCRG00005015542) ENSLCRG00005015565 ENSLCRG00005015566 ENSLCRG00005015567 ufsp1 (ENSLCRG00005015568) ENSLCRG00005015570 epoa (ENSLCRG00005015572) pop7 (ENSLCRG00005015573) ENSLCRG00005015575 epc2 (ENSLCRG00005015576) kif5c (ENSLCRG00005015593) arhgap15 (ENSLCRG00005015801) acvr2aa (ENSLCRG00005015808) ENSLCRG00005016185 #22 ENSLCRG00005016188 ENSLCRG00005016191 ENSLCRG00005016194 ENSLCRG00005016196 s1pr1 (ENSLCRG00005016200) dph5 (ENSLCRG00005016202) slc30a7 (ENSLCRG00005016204) ENSLCRG00005016209 vcam1b (ENSLCRG00005016211) cdc14ab (ENSLCRG00005016212) rtca (ENSLCRG00005016214) dbt (ENSLCRG00005016216) lrrc39 (ENSLCRG00005016218) trmt13 (ENSLCRG00005016222) MAP1S (ENSLCRG00005016227) Large yellow croaker MODERN SPECIES 489 sgta (ENSLCRG00005007560) SLC39A3 (ENSLCRG00005007558) ENSLCRG00005007555 zgc:113223 (ENSLCRG00005007554) reep6 (ENSLCRG00005007552) ENSLCRG00005007551 ENSLCRG00005007550 APC2 (ENSLCRG00005007547) DIRAS1 (ENSLCRG00005007546) gadd45ba (ENSLCRG00005007542) zbtb37 (ENSLCRG00005007539) serpinc1 (ENSLCRG00005007538) ENSLCRG00005007534 #21 PTBP1 (ENSLCRG00005007487) ENSLCRG00005007480 ENSLCRG00005007478 #22 akr1a1b (ENSLCRG00005007315) ENSLCRG00005007313 ENSLCRG00005007310 SLC1A7 (ENSLCRG00005007290) PODN (ENSLCRG00005007288) cpt2 (ENSLCRG00005007286) magoh (ENSLCRG00005007282) aatf (ENSLCRG00005007279) uck2a (ENSLCRG00005007276) tmco1 (ENSLCRG00005007273) aldh9a1a.1 (ENSLCRG00005007256) med8 (ENSLCRG00005007252) pbx1b (ENSLCRG00005007241) glulb (ENSLCRG00005007237) ENSLCRG00005007231 European seabass MODERN SPECIES 17 ENSDLAG00005013883 zgc:113223 (ENSDLAG00005013899) reep6 (ENSDLAG00005013909) ENSDLAG00005027548 ENSDLAG00005029458 ENSDLAG00005013936 ENSDLAG00005035068 ENSDLAG00005030582 ENSDLAG00005030075 zbtb37 (ENSDLAG00005008109) ENSDLAG00005032045 ENSDLAG00005027943 #21 ENSDLAG00005007787 ENSDLAG00005002866 ENSDLAG00005028821 ENSDLAG00005007765 #22 ENSDLAG00005030113 ENSDLAG00005003912 ENSDLAG00005032388 ENSDLAG00005027086 ENSDLAG00005033571 ENSDLAG00005021554 s1pr1 (ENSDLAG00005032314) dph5 (ENSDLAG00005031260) slc30a7 (ENSDLAG00005033053) cdc14ab (ENSDLAG00005031845) rtca (ENSDLAG00005027346) dbt (ENSDLAG00005005421) lrrc39 (ENSDLAG00005003590) trmt13 (ENSDLAG00005018069) ENSDLAG00005034452 Perciformes ANCESTRAL SPECIES 43 ENSGT00940000160221.c ENSGT00390000003182 ENSGT00940000158998 ENSGT00940000156750 ENSGT00530000063404.b ENSGT00940000155899.e.a ENSGT00940000169015 ENSGT00940000159571 ENSGT00390000010568 ENSGT01050000244887.A.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00390000007310 #21 ENSGT01050000244924.a.a.b.a.a ENSGT00940000160040.B.a.b ENSGT00940000159889.b.a #22 ENSGT00400000024256 ENSGT00940000160006 ENSGT00530000064649 Cottioidei ANCESTRAL SPECIES 5 ENSGT00940000160221.c ENSGT00390000003182 ENSGT00940000158998 ENSGT00940000156750 ENSGT00530000063404.b ENSGT00940000155899.e.a ENSGT00940000156511.b ENSGT00940000159571 ENSGT00390000010568 ENSGT01050000244887.A.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00390000007310 #21 ENSGT01050000244924.a.a.b.a.a ENSGT00940000160040.B.a.b ENSGT00940000159889.b.a #22 ENSGT00400000024256 ENSGT00940000160006 ENSGT00530000064649 ENSGT00950000183153.c.b.a.a ENSGT00900000141090.t ENSGT00390000010760.f ENSGT01030000234579.C.m ENSGT00940000158946 ENSGT00510000049619 ENSGT00510000048601.a ENSGT00940000166460 ENSGT00530000063614.a.a ENSGT00940000158737.g ENSGT00940000155050.a ENSGT00940000157895 Lumpfish MODERN SPECIES 19 trmt13 (ENSCLMG00005007054) lrrc39 (ENSCLMG00005007051) dbt (ENSCLMG00005007049) rtca (ENSCLMG00005007044) cdc14ab (ENSCLMG00005007008) vcam1b (ENSCLMG00005007004) slc30a7 (ENSCLMG00005007001) dph5 (ENSCLMG00005007000) s1pr1 (ENSCLMG00005006999) zbtb37 (ENSCLMG00005006997) serpinc1 (ENSCLMG00005006828) stil (ENSCLMG00005006821) #21 ENSCLMG00005006820 PTBP1 (ENSCLMG00005006492) EFNA2 (ENSCLMG00005006490) ENSCLMG00005006489 #22 ENSCLMG00005006488 ENSCLMG00005006487 camk4 (ENSCLMG00005006466) ENSCLMG00005006465 GADD45B (ENSCLMG00005006178) ENSCLMG00005006177 ENSCLMG00005006176 ENSCLMG00005006175 tp63 (ENSCLMG00005006130) zbtb11 (ENSCLMG00005006128) dpt (ENSCLMG00005006127) ATP1B1 (ENSCLMG00005006063) nme7 (ENSCLMG00005005477) ENSCLMG00005005472 zgc:172121 (ENSCLMG00005005470) Perciformes_a ANCESTRAL SPECIES 107 ENSGT01050000244924.a.a.b.a.a ENSGT00940000160040.B.a.b ENSGT00940000159889.b.a #22 ENSGT00400000024256 ENSGT00980000203233 ENSGT00940000160006 ENSGT00530000064649 Pike perch MODERN SPECIES 265 ENSSLUG00000006297 ENSSLUG00000006288 PTBP1 (ENSSLUG00000006224) EFNA2 (ENSSLUG00000006205) ENSSLUG00000006199 #22 ENSSLUG00000006192 ENSSLUG00000005550 ENSSLUG00000005494 ENSSLUG00000005491 ENSSLUG00000005486 Channel bull blenny MODERN SPECIES 18 ENSCGOG00000012252 ENSCGOG00000012254 lsm7 (ENSCGOG00000012255) ENSCGOG00000012261 cers4a (ENSCGOG00000012265) fbn2b (ENSCGOG00000012309) CTXN1 (ENSCGOG00000012568) timm44 (ENSCGOG00000012571) hnrnpm (ENSCGOG00000012800) dmap1 (ENSCGOG00000012828) RNF220 (ENSCGOG00000012976) guk1b (ENSCGOG00000012984) ENSCGOG00000013037 PTBP1 (ENSCGOG00000013058) EFNA2 (ENSCGOG00000013746) ENSCGOG00000013749 #22 ENSCGOG00000013751 ENSCGOG00000013753 ENSCGOG00000013767 ENSCGOG00000013947 CARTPT (ENSCGOG00000013953) ube3a (ENSCGOG00000013962) CNGA3 (ENSCGOG00000014710) TMEM131 (ENSCGOG00000014716) si:ch211-201h21.5 (ENSCGOG00000014841) BIVM (ENSCGOG00000014849) zgc:172121 (ENSCGOG00000014855) nme7 (ENSCGOG00000000124) ATP1B1 (ENSCGOG00000000207) dpt (ENSCGOG00000000217) zbtb11 (ENSCGOG00000000226) Percomorphaceae_D ANCESTRAL SPECIES 8 ENSGT00940000160221.c ENSGT00390000003182 ENSGT00940000158998 ENSGT00940000156750 ENSGT00530000063404.b ENSGT00940000155899.e.a ENSGT00940000156511.b ENSGT00940000159571 ENSGT00390000010568 ENSGT01050000244887.A.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00390000007310 #21 ENSGT01050000244924.a.a.b.a.a ENSGT00940000160040.B.a.b ENSGT00940000159889.b.a #22 ENSGT00530000064649 ENSGT00940000160006 ENSGT00940000165071 ENSGT00400000024256 ENSGT00390000018319.a.b.b.b.a.a ENSGT00940000175916 ENSGT00950000182964.a.b.b.a.a.b ENSGT00940000159915.a ENSGT00530000063749.c.a ENSGT00940000162978.b ENSGT00390000007991 ENSGT00940000161493 ENSGT00940000165051 ENSGT00940000166036 ENSGT00940000160231 Carangaria ANCESTRAL SPECIES 7 ENSGT00940000156750 ENSGT00530000063404.b ENSGT00940000155899.e.a ENSGT00940000156511.b ENSGT00940000165798 ENSGT00940000159323.b ENSGT00940000182464 ENSGT00940000159571 ENSGT00390000010568 ENSGT01050000244887.A.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00390000007310 #21 ENSGT01050000244924.a.a.b.a.a ENSGT00940000160040.B.a.b ENSGT00940000159889.b.a #22 ENSGT00530000064649 ENSGT00940000160006 ENSGT00940000165071 ENSGT00400000024256 ENSGT00390000018319.a.b.b.b.a.a ENSGT00940000175916 ENSGT00950000182964.a.b.b.a.a.b ENSGT00940000159915.a ENSGT00530000063749.c.a ENSGT01030000235617 ENSGT00940000162978.b ENSGT00390000007991 ENSGT00940000161493 ENSGT00940000165051 ENSGT00940000166036 Pleuronectoidei ANCESTRAL SPECIES 20 ENSGT00940000158998 ENSGT00390000003182 ENSGT00940000160221.c ENSGT00940000160580.a ENSGT00530000063404.b ENSGT00940000155899.e.a ENSGT00940000156511.b ENSGT00940000159571 ENSGT00390000010568 ENSGT01050000244887.A.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00390000007310 #21 ENSGT01050000244924.a.a.b.a.a ENSGT00940000160040.B.a.b ENSGT00940000159889.b.a #22 ENSGT00530000064649 ENSGT00940000160006 ENSGT00400000024256 ENSGT00390000018319.a.b.b.b.a.a ENSGT00950000182964.a.b.b.a.a.b ENSGT00940000159915.a ENSGT00530000063749.c.a ENSGT00390000007991 ENSGT00940000159037 ENSGT00940000160231 ENSGT00940000166036 ENSGT00940000165051 ENSGT00940000161493 ENSGT00950000183171.A.b.a.b ENSGT00940000177900 Turbot MODERN SPECIES 3 ENSSMAG00000014633 ENSSMAG00000027568 rtca (ENSSMAG00000014680) cdc14ab (ENSSMAG00000014700) ENSSMAG00000032222 ENSSMAG00000033718 slc30a7 (ENSSMAG00000014812) dph5 (ENSSMAG00000025715) s1pr1 (ENSSMAG00000014865) ENSSMAG00000022573 zbtb37 (ENSSMAG00000014878) serpinc1 (ENSSMAG00000014912) ENSSMAG00000025235 #21 ENSSMAG00000015082 ENSSMAG00000036282 ENSSMAG00000017168 #22 ENSSMAG00000017165 ENSSMAG00000017132 ENSSMAG00000017119 ENSSMAG00000026074 ENSSMAG00000017099 ENSSMAG00000017083 ENSSMAG00000025028 ENSSMAG00000017063 ENSSMAG00000017047 ENSSMAG00000017020 ENSSMAG00000016996 ENSSMAG00000016987 ENSSMAG00000029729 ENSSMAG00000016954 ENSSMAG00000016925 Carangaria_A ANCESTRAL SPECIES 73 ENSGT00940000159889.b.a #22 ENSGT00530000064649 ENSGT00940000160006 ENSGT00940000165071 ENSGT00400000024256 ENSGT00390000018319.a.b.b.b.a.a ENSGT00940000175916 ENSGT00950000182964.a.b.b.a.a.b ENSGT00940000159915.a ENSGT00530000063749.c.a ENSGT01030000235617 ENSGT00940000162978.b ENSGT00390000007991 ENSGT00940000161493 ENSGT00940000165051 ENSGT00940000166036 Seriola ANCESTRAL SPECIES ENSGT00940000159567.a.b ENSGT00940000162200.a.a ENSGT00940000167983 ENSGT00990000204155 ENSGT00950000183177.a.b.a ENSGT01030000234528.B.b.b.cb ENSGT00940000158340 ENSGT00390000007586.a.b ENSGT00940000160357 ENSGT00940000159588 ENSGT01030000235096 ENSGT00940000155482 ENSGT00940000160836.d.b.a.a ENSGT00940000160836.d.a.cb ENSGT00940000160836.d.a.bb ENSGT00940000159889.b.a #22 ENSGT00530000064649 ENSGT00940000160006 ENSGT00940000165071 ENSGT00400000024256 ENSGT00990000207634 ENSGT00940000175916 ENSGT00950000182964.a.b.b.a.a.b ENSGT00940000159915.a ENSGT00530000063749.c.a ENSGT01030000235617 ENSGT00940000162978.b ENSGT00390000007991 ENSGT00940000161493 ENSGT00940000165051 ENSGT00940000166036 Greater amberjack DUPLICATION Greater amberjack MODERN SPECIES 108 psmb11b (ENSSDUG00000020267) ENSSDUG00000020300 ENSSDUG00000020327 slc34a2b (ENSSDUG00000020337) ENSSDUG00000020361 prdm5 (ENSSDUG00000020397) ndnf (ENSSDUG00000020445) CPEB2 (ENSSDUG00000020464) C1QTNF7 (ENSSDUG00000020488) ENSSDUG00000020490 CC2D2A (ENSSDUG00000020519) ENSSDUG00000020730 ENSSDUG00000020745 ENSSDUG00000020757 ENSSDUG00000020787 ENSSDUG00000020798 #22 ENSSDUG00000020813 #22 ENSSDUG00000020821 ENSSDUG00000020828 ENSSDUG00000020841 ENSSDUG00000020853 ENSSDUG00000020871 ENSSDUG00000020881 gadd45ba (ENSSDUG00000020891) DIRAS1 (ENSSDUG00000020909) APC2 (ENSSDUG00000020917) ENSSDUG00000020934 C19orf25 (ENSSDUG00000020940) reep6 (ENSSDUG00000020960) zgc:113223 (ENSSDUG00000020974) ENSSDUG00000020988 Greater amberjack DUPLICATION Greater amberjack MODERN SPECIES 338 ENSSDUG00000023774 #22 Greater amberjack MODERN SPECIES 108 ENSSDUG00000020300 ENSSDUG00000020327 slc34a2b (ENSSDUG00000020337) ENSSDUG00000020361 prdm5 (ENSSDUG00000020397) ndnf (ENSSDUG00000020445) CPEB2 (ENSSDUG00000020464) C1QTNF7 (ENSSDUG00000020488) ENSSDUG00000020490 CC2D2A (ENSSDUG00000020519) ENSSDUG00000020730 ENSSDUG00000020745 ENSSDUG00000020757 ENSSDUG00000020787 ENSSDUG00000020798 #22 ENSSDUG00000020813 #22 ENSSDUG00000020821 ENSSDUG00000020828 ENSSDUG00000020841 ENSSDUG00000020853 ENSSDUG00000020871 ENSSDUG00000020881 gadd45ba (ENSSDUG00000020891) DIRAS1 (ENSSDUG00000020909) APC2 (ENSSDUG00000020917) ENSSDUG00000020934 C19orf25 (ENSSDUG00000020940) reep6 (ENSSDUG00000020960) zgc:113223 (ENSSDUG00000020974) ENSSDUG00000020988 SLC39A3 (ENSSDUG00000021015) Anabantaria ANCESTRAL SPECIES 7 ENSGT00940000160221.c ENSGT00390000003182 ENSGT00940000158998 ENSGT00940000156750 ENSGT00530000063404.b ENSGT00940000155899.e.a ENSGT00940000156511.b ENSGT00940000159571 ENSGT00390000010568 ENSGT01050000244887.A.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00390000007310 #21 ENSGT01050000244924.a.a.b.a.a ENSGT00940000160040.B.a.b ENSGT00940000159889.b.a #22 ENSGT00530000064649 ENSGT00940000165071 ENSGT00400000024256 ENSGT00390000018319.a.b.b.b.a.a ENSGT00940000175916 ENSGT00950000182964.a.b.b.a.a.a.b ENSGT00940000159915.a ENSGT00940000162978.b ENSGT00530000063749.c.a ENSGT00390000007991 ENSGT00940000161493 ENSGT00940000165051 ENSGT00940000166036 ENSGT00940000160231 ENSGT00940000159037 Zig-zag eel MODERN SPECIES 18 ENSMAMG00000016614 trmt13 (ENSMAMG00000016597) lrrc39 (ENSMAMG00000016572) dbt (ENSMAMG00000016550) rtca (ENSMAMG00000016536) cdc14ab (ENSMAMG00000016512) vcam1b (ENSMAMG00000016478) slc30a7 (ENSMAMG00000016446) dph5 (ENSMAMG00000016415) s1pr1 (ENSMAMG00000016408) zbtb37 (ENSMAMG00000016390) serpinc1 (ENSMAMG00000016380) stil (ENSMAMG00000016368) #21 ENSMAMG00000016313 EFNA2 (ENSMAMG00000024958) ENSMAMG00000016269 #22 ENSMAMG00000016264 ENSMAMG00000026734 ENSMAMG00000016221 ENSMAMG00000016206 ENSMAMG00000016192 ENSMAMG00000016179 ENSMAMG00000016169 DIRAS1 (ENSMAMG00000027387) ENSMAMG00000026362 ENSMAMG00000016128 ENSMAMG00000016114 ENSMAMG00000027502 frem1b (ENSMAMG00000016024) ENSMAMG00000028441 nfia (ENSMAMG00000015947) Anabantoidei ANCESTRAL SPECIES 6 ENSGT00940000160221.c ENSGT00940000160580.a ENSGT01050000244887.A.a.b ENSGT00390000010568 ENSGT00940000159571 ENSGT00940000156511.b ENSGT00940000155899.e.a ENSGT00530000063404.b ENSGT00940000156750 ENSGT00940000158998 ENSGT00940000159554 ENSGT00940000157967 ENSGT00390000007310 #21 ENSGT01050000244924.a.a.b.a.a ENSGT00940000160040.B.a.b ENSGT00940000159889.b.a #22 ENSGT00530000064649 ENSGT00940000165071 ENSGT00940000160006 ENSGT00400000024256 ENSGT00390000018319.a.b.b.b.a.a ENSGT00940000175916 ENSGT00950000182964.a.b.b.a.a.a.b ENSGT00940000159915.a ENSGT00940000162978.b ENSGT00530000063749.c.a ENSGT00390000007991 ENSGT00940000161493 ENSGT00940000165051 ENSGT00940000166036 ENSGT00940000160231 Siamese fighting fish MODERN SPECIES 15 ENSBSLG00000010826 palm1a (ENSBSLG00000010836) s1pr1 (ENSBSLG00000010921) dph5 (ENSBSLG00000010944) slc30a7 (ENSBSLG00000010972) vcam1b (ENSBSLG00000011386) cdc14ab (ENSBSLG00000011793) rtca (ENSBSLG00000012565) dbt (ENSBSLG00000012602) lrrc39 (ENSBSLG00000012634) zbtb37 (ENSBSLG00000012637) serpinc1 (ENSBSLG00000012639) stil (ENSBSLG00000013067) #21 ENSBSLG00000013421 EFNA2 (ENSBSLG00000014737) ENSBSLG00000014748 #22 ENSBSLG00000014751 ENSBSLG00000014772 ENSBSLG00000015146 ENSBSLG00000015209 gadd45ba (ENSBSLG00000015222) APC2 (ENSBSLG00000015279) ENSBSLG00000015399 ENSBSLG00000015405 reep6 (ENSBSLG00000015418) zgc:113223 (ENSBSLG00000015538) ENSBSLG00000015553 SLC39A3 (ENSBSLG00000015655) ENSBSLG00000015664 nfia (ENSBSLG00000006813) ENSBSLG00000007289 Climbing perch DUPLICATION Climbing perch MODERN SPECIES 17 ENSATEG00000006597 ENSATEG00000006590 ENSATEG00000006569 slc30a7 (ENSATEG00000006468) ENSATEG00000029152 cdc14ab (ENSATEG00000006361) rtca (ENSATEG00000006315) dbt (ENSATEG00000006273) lrrc39 (ENSATEG00000006232) zbtb37 (ENSATEG00000006208) ENSATEG00000005938 ENSATEG00000005876 #21 ENSATEG00000005829 ENSATEG00000025906 #22 ENSATEG00000028965 ENSATEG00000028322 #22 ENSATEG00000025253 ENSATEG00000005652 ENSATEG00000005644 ENSATEG00000005623 ENSATEG00000005614 ENSATEG00000005592 ENSATEG00000005579 ENSATEG00000005573 ENSATEG00000027781 ENSATEG00000026436 reep6 (ENSATEG00000005267) zgc:113223 (ENSATEG00000005255) ENSATEG00000005210 ENSATEG00000030140 frem1b (ENSATEG00000005029) Climbing perch MODERN SPECIES 17 ENSATEG00000006624 ENSATEG00000006608 ENSATEG00000006597 ENSATEG00000006590 ENSATEG00000006569 slc30a7 (ENSATEG00000006468) ENSATEG00000029152 cdc14ab (ENSATEG00000006361) rtca (ENSATEG00000006315) dbt (ENSATEG00000006273) lrrc39 (ENSATEG00000006232) zbtb37 (ENSATEG00000006208) ENSATEG00000005938 ENSATEG00000005876 #21 ENSATEG00000005829 ENSATEG00000025906 #22 ENSATEG00000028965 ENSATEG00000028322 #22 ENSATEG00000025253 ENSATEG00000005652 ENSATEG00000005644 ENSATEG00000005623 ENSATEG00000005614 ENSATEG00000005592 ENSATEG00000005579 ENSATEG00000005573 ENSATEG00000027781 ENSATEG00000026436 reep6 (ENSATEG00000005267) zgc:113223 (ENSATEG00000005255) ENSATEG00000005210 Pinecone sodierfish MODERN SPECIES 18 TAF4B (ENSMMDG00005021761) ENSMMDG00005021766 ENSMMDG00005021770 aqp4 (ENSMMDG00005002791) cdh2 (ENSMMDG00005003329) ENSMMDG00005007692 ENSMMDG00005007694 dsc2l (ENSMMDG00005007697) ENSMMDG00005007702 ENSMMDG00005007706 ENSMMDG00005007712 ENSMMDG00005007717 ENSMMDG00005007720 gjc4b (ENSMMDG00005007723) ENSMMDG00005007724 ENSMMDG00005007727 #22 ENSMMDG00005007729 PATJ (ENSMMDG00005007731) tm2d1 (ENSMMDG00005007733) nfia (ENSMMDG00005007736) frem1b (ENSMMDG00005007738) ENSMMDG00005007745 nrd1b (ENSMMDG00005007746) ENSMMDG00005007747 atpaf1 (ENSMMDG00005007748) #31 ENSMMDG00005007752 CARTPT (ENSMMDG00005007755) ENSMMDG00005007758 gadd45ba (ENSMMDG00005007761) ENSMMDG00005007763 ENSMMDG00005007765 Otomorpha ANCESTRAL SPECIES 791 ENSGT00940000159889.b.a #22 ENSGT00940000154660.b #23 Otophysi ANCESTRAL SPECIES 597 ENSGT00940000159889.b.a #22 ENSGT00940000154660.b #23 Cyprinoidei ANCESTRAL SPECIES ENSGT00940000159889.b.a #22 Cyprininae ANCESTRAL SPECIES ENSGT00940000159889.b.a #22 Cyprininae_a ANCESTRAL SPECIES 246 ENSGT00530000063404.b.v ENSGT00940000156750.d.a ENSGT00390000003182.a ENSGT00940000155295.y.l.a ENSGT00950000182917.b.a.b.g ENSGT00940000155638.wb.b ENSGT00940000153321.b.a.g ENSGT00940000153902.a.d ENSGT00940000154973.a.b.c ENSGT00390000013989.a.a ENSGT00390000013003.e.a.a.a ENSGT00940000157639.p ENSGT00900000141021.a.a ENSGT00940000159889.b.b.e.b #22 ENSGT01030000234837 ENSGT00940000159889.b.a #22 ENSGT00940000154660.b #23 ENSGT00940000155136.ib ENSGT00940000157668.m ENSGT00950000182916.a.b.a.a.a.a.c Golden-line barbel MODERN SPECIES 156 dbt (ENSSGRG00000000976) ENSSGRG00000000975 lrrc39 (ENSSGRG00000000974) trmt13 (ENSSGRG00000000973) OSBPL1A (ENSSGRG00000000971) ENSSGRG00000000970 OSBPL1A (ENSSGRG00000000624) ttc39c (ENSSGRG00000000583) ENSSGRG00000000312 ankrd29 (ENSSGRG00000000118) ENSSGRG00000000109 ENSSGRG00000000104 ENSSGRG00000053722 stx6 (ENSSGRG00000053720) ier5 (ENSSGRG00000053719) ENSSGRG00000053717 #22 pdzk1ip1 (ENSSGRG00000053716) #23 ENSSGRG00000053710 tm2d1 (ENSSGRG00000053709) RAB38 (ENSSGRG00000053708) nfia (ENSSGRG00000053621) ENSSGRG00000053611 nrd1b (ENSSGRG00000053551) nphs2 (ENSSGRG00000053542) tdrd5 (ENSSGRG00000053539) FAM163A (ENSSGRG00000053538) RABGAP1L (ENSSGRG00000053485) ENSSGRG00000053477 ENSSGRG00000053473 ENSSGRG00000053471 ENSSGRG00000053469 Actinopterygii ANCESTRAL SPECIES 189 ENSGT00940000155026 ENSGT00940000154690 ENSGT00950000182915.b.b.a.a ENSGT00940000155751 ENSGT00950000182917.a.b.a ENSGT00730000110988 ENSGT00940000160194 ENSGT00940000154831 ENSGT00940000161649 #7 ENSGT00940000157399 #10 ENSGT00940000155042.a.a ##12 ENSGT00530000063821.a ##13 ENSGT00940000157546 #15 ENSGT00940000165232 ENSGT00390000007310 #21 ENSGT00940000159889.b.b #22 ENSGT01040000244250 ENSGT00940000155136 ENSGT00940000157668 ENSGT00950000182916.a.b.a.a.a.a ENSGT00940000165098 ENSGT00390000012765 #31 Reedfish MODERN SPECIES 1 EPS15 (ENSECRG00000008774) TTC39A (ENSECRG00000008798) rnf11b (ENSECRG00000008822) cdkn2c (ENSECRG00000008847) faf1 (ENSECRG00000008876) dmrta2 (ENSECRG00000008913) #7 ENSECRG00000008927 elavl4 (ENSECRG00000009035) #10 agbl4 (ENSECRG00000009332) ##12 bend5 (ENSECRG00000009353) #11 AGBL4 (ENSECRG00000009373) ##12 spata6 (ENSECRG00000009395) ##13 slc5a9 (ENSECRG00000009464) #15 zgc:171480 (ENSECRG00000009525) stil (ENSECRG00000009542) #21 tal1 (ENSECRG00000009558) #22 ENSECRG00000009566 PATJ (ENSECRG00000009615) tm2d1 (ENSECRG00000009762) nfia (ENSECRG00000009794) frem1b (ENSECRG00000009851) ENSECRG00000009916 atpaf1 (ENSECRG00000009928) #31 RABGAP1L (ENSECRG00000009946) GPR52 (ENSECRG00000009965) rc3h1a (ENSECRG00000009981) serpinc1 (ENSECRG00000009998) zbtb37 (ENSECRG00000011280) ENSECRG00000011337 ENSECRG00000011364 Neopterygii ANCESTRAL SPECIES 231 ENSGT00390000013003 ENSGT00940000157639 ENSGT00900000141021.a ENSGT00940000159889.b.b #22 ENSGT01040000244250 ENSGT00940000155136 ENSGT00940000157668 ENSGT00950000182916.a.b.a.a.a.a ENSGT00940000165098 ENSGT00390000012765 #31 ENSGT00940000154611 ENSGT00940000163422 ENSGT00940000159228 ENSGT00940000159902 ENSGT01030000234614.B.b ENSGT00390000005554 Spotted gar MODERN SPECIES 648 ENSLOCG00000010161 ENSLOCG00000010151 vtg5 (ENSLOCG00000010104) ENSLOCG00000010091 ctbs (ENSLOCG00000010081) SPATA1 (ENSLOCG00000010073) gng5 (ENSLOCG00000010068) rpf1 (ENSLOCG00000010053) ankrd13c (ENSLOCG00000010043) cthl (ENSLOCG00000010025) PTGER3 (ENSLOCG00000010015) zranb2 (ENSLOCG00000010010) ENSLOCG00000009981 stx6 (ENSLOCG00000009973) ier5 (ENSLOCG00000017746) tal1 (ENSLOCG00000009966) #22 PATJ (ENSLOCG00000009943) tm2d1 (ENSLOCG00000009936) nfia (ENSLOCG00000009919) frem1b (ENSLOCG00000009896) ENSLOCG00000009890 ENSLOCG00000009886 nrd1b (ENSLOCG00000009851) ENSLOCG00000009849 xpr1a (ENSLOCG00000009831) osbpl9 (ENSLOCG00000009802) tor3a (ENSLOCG00000009789) abl2 (ENSLOCG00000009782) soat1 (ENSLOCG00000009767) ENSLOCG00000009719 ENSLOCG00000009682 Osteoglossocephalai ANCESTRAL SPECIES 159 ENSGT00390000009609 ENSGT00940000156511.b ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000159571 ENSGT00390000010568 ENSGT01050000244887.A.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00940000157143 ENSGT00390000007310 #21 ENSGT00390000013003.e.a ENSGT00940000157639 ENSGT00900000141021.a ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT01040000244250 ENSGT00940000155136 ENSGT00940000157668 ENSGT00950000182916.a.b.a.a.a.a ENSGT00940000165098 ENSGT00390000012765 #31 ENSGT00940000159943 ENSGT00940000155026 ENSGT00940000159228.b.a ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a ENSGT00940000154611.ad.a Clupeocephala ANCESTRAL SPECIES 174 ENSGT00940000156511.b ENSGT00940000159571 ENSGT00390000010568 ENSGT01050000244887.A.a.b ENSGT00940000159554 ENSGT00940000157967 ENSGT00940000157143.c.a ENSGT00390000007310 #21 ENSGT00390000013003.e.a ENSGT00940000157639 ENSGT00900000141021.a ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT01030000234837 ENSGT00940000155136 ENSGT00940000157668 ENSGT00950000182916.a.b.a.a.a.a ENSGT00940000165098 ENSGT00390000012765 #31 ENSGT00940000159943 ENSGT00940000155026.d ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a ENSGT00940000154611.ad.a ENSGT00940000163422 ENSGT00940000154611.ad.b Euteleosteomorpha ANCESTRAL SPECIES 163 ENSGT00940000160511.a ENSGT00990000204283 ENSGT00390000001015.c ENSGT00940000155511.n.b ENSGT00940000155807.b ENSGT00390000009776.p ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00940000161675 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT01030000234837 ENSGT00940000155136 ENSGT00940000157668 ENSGT00950000182916.a.b.a.a.a.a ENSGT00940000165098 ENSGT00390000012765 #31 ENSGT00940000159943 ENSGT00940000155026.d ENSGT00390000013973.A.a.c.b.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000154611.bd ENSGT00940000163422 Acanthomorphata ANCESTRAL SPECIES ENSGT00940000155954.a ENSGT00940000156504.i.b ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00940000161675 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT00940000177269 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT00940000174564 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00940000153655.A.b ENSGT00390000011725.d ENSGT00940000180772 ENSGT00940000166881 ENSGT00940000159901 ENSGT00510000047486 ENSGT00940000159121 Euacanthomorphacea ANCESTRAL SPECIES 4 ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00940000161675 ENSGT00940000164076.b.b ENSGT00940000177127 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT00940000177269 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT00940000174564 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00940000153655.A.b ENSGT00390000011725.d ENSGT00940000180772 ENSGT00940000166881 ENSGT00940000159901 ENSGT00510000047486 ENSGT00940000159121 Percomorphaceae ANCESTRAL SPECIES 6 ENSGT00940000156504.i.b ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00940000161675 ENSGT00940000177127 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT00940000177269 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT00940000176999 ENSGT00940000174564 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00940000153655.A.b ENSGT00390000011725.d ENSGT00940000166881 ENSGT00940000159901 ENSGT00510000047486 ENSGT00940000159121 Tiger tail seahorse MODERN SPECIES 190 parla (ENSHCOG00000009800) RC3H1 (ENSHCOG00000009753) tal1 (ENSHCOG00000009588) #22 ppm1la (ENSHCOG00000009577) arl14 (ENSHCOG00000009562) ENSHCOG00000009553 ENSHCOG00000009550 zp3b (ENSHCOG00000009537) zgc:153615 (ENSHCOG00000009529) selenot1a (ENSHCOG00000009520) kif2c (ENSHCOG00000009478) ptch2 (ENSHCOG00000009435) eif2b3 (ENSHCOG00000009381) plk3 (ENSHCOG00000009361) cacybp (ENSHCOG00000009319) mrps14 (ENSHCOG00000009308) tnn (ENSHCOG00000009303) ENSHCOG00000009267 Percomorphaceae_B ANCESTRAL SPECIES 8 ENSGT00940000176855 ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00940000161675 ENSGT00940000177127 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT01100000266564 ENSGT00940000155435.A.b ENSGT00940000177269 ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT00940000176999 ENSGT00940000174564 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00940000153655.A.b ENSGT00390000011725.d ENSGT00940000180772 ENSGT00940000166881 ENSGT00940000159901 Percomorphaceae_C ANCESTRAL SPECIES 6 ENSGT00940000176855 ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00940000161675 ENSGT00940000177127 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT00940000177269 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT00940000174564 ENSGT00940000176999 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00940000174824.b ENSGT00940000174824.a ENSGT00940000153655.A.b ENSGT00390000011725.d ENSGT00940000180772 ENSGT00940000166881 Eupercaria ANCESTRAL SPECIES 22 ENSGT00940000176855 ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00940000161675 ENSGT00940000177127 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT01100000266564 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT00940000174564 ENSGT00940000176999 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00940000174824.b ENSGT00940000174824.a ENSGT00940000153655.A.b ENSGT00390000011725.d ENSGT00940000180772 ENSGT00940000166881 Tetraodontidae ANCESTRAL SPECIES 13 ENSGT00940000155954.a ENSGT00940000156504.i.b ENSGT00940000176855 ENSGT00940000164732.A ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000177127 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00950000183104.A.a.a ENSGT01050000244838.H.d.c ENSGT01090000260100.B.b ENSGT00940000158447 ENSGT00940000153241.B.d ENSGT00940000156474.a.a ENSGT00940000156970.c.a ENSGT00940000159656.a.b ENSGT00940000161104 ENSGT00940000156577.b ENSGT00940000157761 ENSGT00940000178718 ENSGT00620000089392 Fugu MODERN SPECIES 14 pax3a (ENSTRUG00000013444) ENSTRUG00000023713 ENSTRUG00000031383 EPHB1 (ENSTRUG00000013083) gpc1b (ENSTRUG00000023403) ENSTRUG00000012891 NYAP2 (ENSTRUG00000012837) ENSTRUG00000031835 ENSTRUG00000028509 ENSTRUG00000028343 fgf12a (ENSTRUG00000008855) parla (ENSTRUG00000008715) extl2 (ENSTRUG00000031861) RC3H1 (ENSTRUG00000008347) ENSTRUG00000031652 tal1 (ENSTRUG00000020873) #22 OTOL1 (ENSTRUG00000008134) ppm1la (ENSTRUG00000021836) cdc20 (ENSTRUG00000007857) elovl1a (ENSTRUG00000007647) bokb (ENSTRUG00000007558) thap4 (ENSTRUG00000007548) agxtb (ENSTRUG00000007149) KIF1A (ENSTRUG00000005189) ENSTRUG00000030860 rab6bb (ENSTRUG00000004881) aire (ENSTRUG00000004715) amotl2b (ENSTRUG00000004524) tnr (ENSTRUG00000003799) ENSTRUG00000023917 ENSTRUG00000024713 Tetraodon MODERN SPECIES 6 ap1s3b (ENSTNIG00000000593) scg2b (ENSTNIG00000000928) acsl3b (ENSTNIG00000015280) pax3a (ENSTNIG00000015279) ENSTNIG00000015278 ENSTNIG00000015277 EPHB1 (ENSTNIG00000015276) gpc1b (ENSTNIG00000015275) ENSTNIG00000015274 NYAP2 (ENSTNIG00000015273) fgf12a (ENSTNIG00000015272) parla (ENSTNIG00000015271) extl2 (ENSTNIG00000015270) RC3H1 (ENSTNIG00000015269) ENSTNIG00000015268 tal1 (ENSTNIG00000001525) #22 otol1a (ENSTNIG00000015267) ppm1la (ENSTNIG00000015266) cdc20 (ENSTNIG00000015265) cdc20 (ENSTNIG00000015264) elovl1a (ENSTNIG00000015263) bokb (ENSTNIG00000015262) thap4 (ENSTNIG00000015261) agxtb (ENSTNIG00000015260) KIF1A (ENSTNIG00000015259) ENSTNIG00000015258 rab6bb (ENSTNIG00000015257) aire (ENSTNIG00000015256) amotl2b (ENSTNIG00000015255) tnr (ENSTNIG00000015254) tnn (ENSTNIG00000015253) Eupecaria_A ANCESTRAL SPECIES 8 ENSGT00940000176855 ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00940000161675 ENSGT00940000177127 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT01100000266564 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT00940000174564 ENSGT00940000176999 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00940000174824.a ENSGT00940000153655.A.b ENSGT00390000011725.d ENSGT00940000180772 ENSGT00940000166881 ENSGT00940000159901 Ballan wrasse MODERN SPECIES 327 ENSLBEG00000022143 EPHB1 (ENSLBEG00000022116) gpc1b (ENSLBEG00000022070) ENSLBEG00000022022 NYAP2 (ENSLBEG00000021977) ENSLBEG00000021910 ENSLBEG00000021882 fgf12a (ENSLBEG00000021839) parla (ENSLBEG00000021793) extl2 (ENSLBEG00000021772) zgc:110366 (ENSLBEG00000021728) RC3H1 (ENSLBEG00000021392) ENSLBEG00000021236 tal1 (ENSLBEG00000021203) #22 otol1a (ENSLBEG00000021168) ppm1la (ENSLBEG00000021137) arl14 (ENSLBEG00000021116) zp3b (ENSLBEG00000021090) zgc:153615 (ENSLBEG00000021050) Eupecaria_B ANCESTRAL SPECIES 8 ENSGT00940000176855 ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00940000161675 ENSGT00940000177127 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT01100000266564 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT00940000174564 ENSGT00940000176999 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00940000174824.a ENSGT00940000153655.A.b ENSGT00390000011725.d ENSGT00940000180772 ENSGT00940000166881 ENSGT00940000159901 Perciformes ANCESTRAL SPECIES 5 ENSGT00940000156504.i.b ENSGT00940000176855 ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00940000161675 ENSGT00940000177127 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00940000159889.b.b #22 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT00940000174564 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00390000011725.d ENSGT00940000180772 ENSGT00940000166881 ENSGT00940000159901 ENSGT00510000047486 ENSGT00940000159121 ENSGT00390000016470 ENSGT00390000015663 Cottioidei ANCESTRAL SPECIES 15 ENSGT00940000156504.i.b ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00940000161675 ENSGT00940000177127 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT00940000174564 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00390000011725.d ENSGT00940000180772 ENSGT00940000166881 ENSGT00940000159901 ENSGT00510000047486 ENSGT00940000159121 ENSGT00390000016470 ENSGT00390000015663 Lumpfish MODERN SPECIES 8 acsl3b (ENSCLMG00005004793) pax3a (ENSCLMG00005004640) ENSCLMG00005004587 EPHB1 (ENSCLMG00005004502) gpc1b (ENSCLMG00005004439) ENSCLMG00005004370 NYAP2 (ENSCLMG00005016173) ENSCLMG00005016172 ENSCLMG00005016171 ENSCLMG00005016170 fgf12a (ENSCLMG00005016166) parla (ENSCLMG00005016163) extl2 (ENSCLMG00005016161) zgc:110366 (ENSCLMG00005016160) RC3H1 (ENSCLMG00005016159) tal1 (ENSCLMG00005016154) #22 otol1a (ENSCLMG00005016152) ppm1la (ENSCLMG00005016150) arl14 (ENSCLMG00005016148) ENSCLMG00005016147 zp3b (ENSCLMG00005016143) ENSCLMG00005016131 zgc:153615 (ENSCLMG00005016118) selenot1a (ENSCLMG00005016114) ENSCLMG00005016111 kif2c (ENSCLMG00005016107) ptch2 (ENSCLMG00005016103) eif2b3 (ENSCLMG00005016095) plk3 (ENSCLMG00005016006) cacybp (ENSCLMG00005016000) mrps14 (ENSCLMG00005015999) Stickleback MODERN SPECIES 2 ENSGACG00000014008 EPHB1 (ENSGACG00000013951) gpc1b (ENSGACG00000013944) ENSGACG00000013943 ENSGACG00000013942 NYAP2 (ENSGACG00000013940) COL4A4 (ENSGACG00000013929) COL4A3 (ENSGACG00000013912) fgf12a (ENSGACG00000013900) parla (ENSGACG00000013888) extl2 (ENSGACG00000013881) zgc:110366 (ENSGACG00000013861) RC3H1 (ENSGACG00000013855) ENSGACG00000013852 ENSGACG00000013849 tal1 (ENSGACG00000013846) #22 otol1a (ENSGACG00000013842) ppm1la (ENSGACG00000013841) arl14 (ENSGACG00000013840) zp3b (ENSGACG00000013837) ENSGACG00000013835 zgc:153615 (ENSGACG00000013832) ENSGACG00000013829 selenot1a (ENSGACG00000013822) kif2c (ENSGACG00000013814) ptch2 (ENSGACG00000013809) eif2b3 (ENSGACG00000013800) plk3 (ENSGACG00000013777) cacybp (ENSGACG00000013758) mrps14 (ENSGACG00000013755) tnn (ENSGACG00000013750) Perciformes_a ANCESTRAL SPECIES 17 ENSGT00940000156504.i.b ENSGT00940000176855 ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000164076.a.b ENSGT00940000161675 ENSGT00940000177127 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00940000159889.b.b #22 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00940000176999 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00390000011725.d ENSGT00940000166881 ENSGT00940000159901 ENSGT00510000047486 ENSGT00940000159121 ENSGT00390000016470 ENSGT00390000015663 ENSGT00940000166882 ENSGT00940000157761 Pike perch MODERN SPECIES 55 ENSSLUG00000024277 EPHB1 (ENSSLUG00000024155) gpc1b (ENSSLUG00000024138) ENSSLUG00000024128 NYAP2 (ENSSLUG00000024120) ENSSLUG00000024115 ENSSLUG00000024107 ENSSLUG00000024098 ENSSLUG00000024090 fgf12a (ENSSLUG00000024060) parla (ENSSLUG00000024041) extl2 (ENSSLUG00000024040) zgc:110366 (ENSSLUG00000024035) zgc:110366 (ENSSLUG00000024029) RC3H1 (ENSSLUG00000024025) tal1 (ENSSLUG00000024017) #22 otol1a (ENSSLUG00000024012) ppm1la (ENSSLUG00000024007) ENSSLUG00000024005 zp3b (ENSSLUG00000024001) ENSSLUG00000023980 zgc:153615 (ENSSLUG00000023976) selenot1a (ENSSLUG00000023974) kif2c (ENSSLUG00000023955) ptch2 (ENSSLUG00000023946) ENSSLUG00000023942 Channel bull blenny MODERN SPECIES 8 ENSCGOG00000020004 EPHB1 (ENSCGOG00000019434) gpc1b (ENSCGOG00000019310) ENSCGOG00000019298 ENSCGOG00000019297 ENSCGOG00000019294 ENSCGOG00000019286 ENSCGOG00000019282 ENSCGOG00000019269 ENSCGOG00000019264 fgf12a (ENSCGOG00000019257) parla (ENSCGOG00000019235) extl2 (ENSCGOG00000019230) zgc:110366 (ENSCGOG00000019223) RC3H1 (ENSCGOG00000019158) tal1 (ENSCGOG00000019144) #22 ENSCGOG00000019142 otol1a (ENSCGOG00000019140) ppm1la (ENSCGOG00000019135) ENSCGOG00000019132 zp3b (ENSCGOG00000019112) ENSCGOG00000019106 zgc:153615 (ENSCGOG00000019103) selenot1a (ENSCGOG00000019102) kif2c (ENSCGOG00000018526) ptch2 (ENSCGOG00000018220) eif2b3 (ENSCGOG00000018061) plk3 (ENSCGOG00000017360) cacybp (ENSCGOG00000017333) mrps14 (ENSCGOG00000017332) tnn (ENSCGOG00000017317) Eupecaria_C ANCESTRAL SPECIES 10 ENSGT00940000156504.i.b ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00940000161675 ENSGT00940000177127 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT01100000266564 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00940000176999 ENSGT00940000174564 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00940000174824.a ENSGT00940000153655.A.b ENSGT00390000011725.d ENSGT00940000180772 ENSGT00940000166881 ENSGT00940000159901 ENSGT00510000047486 Gilthead seabream MODERN SPECIES 13 acsl3b (ENSSAUG00010022431) ENSSAUG00010022411 pax3a (ENSSAUG00010022387) ENSSAUG00010022371 EPHB1 (ENSSAUG00010021848) gpc1b (ENSSAUG00010021830) ENSSAUG00010021825 NYAP2 (ENSSAUG00010021822) ENSSAUG00010021814 fgf12a (ENSSAUG00010021795) parla (ENSSAUG00010021786) extl2 (ENSSAUG00010021785) zgc:110366 (ENSSAUG00010021779) RC3H1 (ENSSAUG00010021765) ENSSAUG00010021763 tal1 (ENSSAUG00010021761) #22 ENSSAUG00010021760 otol1a (ENSSAUG00010021757) ppm1la (ENSSAUG00010021737) ENSSAUG00010021736 ENSSAUG00010021735 zp3b (ENSSAUG00010021733) ENSSAUG00010021732 zgc:153615 (ENSSAUG00010021731) ENSSAUG00010021730 ENSSAUG00010021729 selenot1a (ENSSAUG00010021727) ENSSAUG00010021725 kif2c (ENSSAUG00010021724) ptch2 (ENSSAUG00010019008) eif2b3 (ENSSAUG00010018975) Eupercaria_incertae_sedis ANCESTRAL SPECIES 8 ENSGT00940000156504.i.b ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00940000161675 ENSGT00940000177127 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00940000174824.a ENSGT00940000153655.A.b ENSGT00390000011725.d ENSGT00940000180772 ENSGT00940000166881 ENSGT00940000159901 ENSGT00510000047486 ENSGT00940000159121 ENSGT00390000016470 Large yellow croaker MODERN SPECIES 483 ENSLCRG00005003555 ENSLCRG00005002868 gpc1b (ENSLCRG00005002837) ENSLCRG00005002829 NYAP2 (ENSLCRG00005002824) ENSLCRG00005002820 ENSLCRG00005002813 ENSLCRG00005002810 ENSLCRG00005002806 fgf12a (ENSLCRG00005002800) parla (ENSLCRG00005002795) extl2 (ENSLCRG00005002785) zgc:110366 (ENSLCRG00005002780) RC3H1 (ENSLCRG00005002755) ENSLCRG00005002747 tal1 (ENSLCRG00005002744) #22 otol1a (ENSLCRG00005002741) ppm1la (ENSLCRG00005002737) ENSLCRG00005002733 ENSLCRG00005002730 ENSLCRG00005002728 zp3b (ENSLCRG00005002708) ENSLCRG00005002694 zgc:153615 (ENSLCRG00005002686) ENSLCRG00005002682 ENSLCRG00005002679 selenot1a (ENSLCRG00005002674) ENSLCRG00005002669 kif2c (ENSLCRG00005002577) ptch2 (ENSLCRG00005020499) eif2b3 (ENSLCRG00005020487) European seabass MODERN SPECIES pax3a (ENSDLAG00005001320) ENSDLAG00005001462 ENSDLAG00005001548 gpc1b (ENSDLAG00005001809) ENSDLAG00005001840 NYAP2 (ENSDLAG00005001855) ENSDLAG00005028760 COL4A3 (ENSDLAG00005032448) ENSDLAG00005001901 fgf12a (ENSDLAG00005027555) ENSDLAG00005028884 extl2 (ENSDLAG00005031807) zgc:110366 (ENSDLAG00005001990) ENSDLAG00005002014 ENSDLAG00005002060 ENSDLAG00005030174 #22 otol1a (ENSDLAG00005026557) selenot1a (ENSDLAG00005002071) ppm1la (ENSDLAG00005026514) arl14 (ENSDLAG00005034021) zp3b (ENSDLAG00005002082) ENSDLAG00005002101 zgc:153615 (ENSDLAG00005002109) ENSDLAG00005002127 ENSDLAG00005033279 ENSDLAG00005002146 ENSDLAG00005002252 ENSDLAG00005005026 plk3 (ENSDLAG00005005093) cacybp (ENSDLAG00005005433) mrps14 (ENSDLAG00005005441) Percomorphaceae_D ANCESTRAL SPECIES 6 ENSGT00940000176855 ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00940000153991.b.b ENSGT00940000177127 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT00940000177269 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT00940000174564 ENSGT00940000176999 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00940000174824.b ENSGT00940000174824.a ENSGT00940000153655.A.b ENSGT00390000011725.d ENSGT00940000180772 ENSGT00940000166881 Anabantaria ANCESTRAL SPECIES 8 ENSGT00940000176855 ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00940000153991.b.b ENSGT00940000177127 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT00940000155435.A.b ENSGT00940000177269 ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT00940000176999 ENSGT00940000174564 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00390000011725.d ENSGT00940000180772 ENSGT00940000166881 ENSGT00940000159901 ENSGT00510000047486 ENSGT00940000159121 Zig-zag eel MODERN SPECIES 8 ENSMAMG00000028312 ENSMAMG00000011544 ENSMAMG00000011555 gpc1b (ENSMAMG00000011584) ENSMAMG00000011591 ENSMAMG00000011596 ENSMAMG00000011611 ENSMAMG00000025976 ENSMAMG00000011637 fgf12a (ENSMAMG00000011646) ENSMAMG00000011661 extl2 (ENSMAMG00000026974) ENSMAMG00000011682 ENSMAMG00000011691 ENSMAMG00000025046 ENSMAMG00000027884 #22 otol1a (ENSMAMG00000011708) ENSMAMG00000011737 ppm1la (ENSMAMG00000011748) arl14 (ENSMAMG00000011773) zp3b (ENSMAMG00000011779) ENSMAMG00000011794 ENSMAMG00000011808 selenot1a (ENSMAMG00000011829) ENSMAMG00000011843 ENSMAMG00000011872 ENSMAMG00000011952 plk3 (ENSMAMG00000012021) cacybp (ENSMAMG00000012043) mrps14 (ENSMAMG00000012048) tnn (ENSMAMG00000012071) Anabantoidei ANCESTRAL SPECIES 18 ENSGT00940000156504.i.b ENSGT00940000176855 ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.b.b ENSGT00940000177127 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00940000176999 ENSGT00940000174564 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00390000011725.d ENSGT00940000180772 ENSGT00940000166881 ENSGT00940000159901 ENSGT00510000047486 ENSGT00940000159121 ENSGT00390000016470 ENSGT00390000015663 Climbing perch MODERN SPECIES 8 ENSATEG00000013024 ENSATEG00000012988 gpc1b (ENSATEG00000012962) ENSATEG00000012945 ENSATEG00000012919 ENSATEG00000012907 ENSATEG00000026080 ENSATEG00000027610 ENSATEG00000029017 fgf12a (ENSATEG00000025241) ENSATEG00000012805 extl2 (ENSATEG00000025641) zgc:110366 (ENSATEG00000012740) ENSATEG00000012720 ENSATEG00000029512 ENSATEG00000012714 #22 otol1a (ENSATEG00000012661) ENSATEG00000012642 ENSATEG00000012628 ENSATEG00000030144 zp3b (ENSATEG00000012592) ENSATEG00000012529 ENSATEG00000012500 selenot1a (ENSATEG00000012479) ENSATEG00000028126 ENSATEG00000012449 ENSATEG00000012364 ENSATEG00000012292 plk3 (ENSATEG00000012246) cacybp (ENSATEG00000012239) mrps14 (ENSATEG00000012233) Siamese fighting fish MODERN SPECIES 8 acsl3b (ENSBSLG00000021920) ENSBSLG00000022258 pax3a (ENSBSLG00000022353) ENSBSLG00000022477 EPHB1 (ENSBSLG00000005255) gpc1b (ENSBSLG00000006342) ENSBSLG00000006473 NYAP2 (ENSBSLG00000006554) ENSBSLG00000006720 ENSBSLG00000006974 fgf12a (ENSBSLG00000006982) zgc:110366 (ENSBSLG00000007073) extl2 (ENSBSLG00000007116) RC3H1 (ENSBSLG00000007837) ENSBSLG00000008020 tal1 (ENSBSLG00000008034) #22 otol1a (ENSBSLG00000008040) ppm1la (ENSBSLG00000008053) ENSBSLG00000008078 ENSBSLG00000008087 zgc:153615 (ENSBSLG00000008096) selenot1a (ENSBSLG00000008117) kif2c (ENSBSLG00000008141) ptch2 (ENSBSLG00000008196) eif2b3 (ENSBSLG00000008947) plk3 (ENSBSLG00000009133) cacybp (ENSBSLG00000010629) mrps14 (ENSBSLG00000010596) tnn (ENSBSLG00000010740) ENSBSLG00000011594 tnr (ENSBSLG00000011875) Carangaria ANCESTRAL SPECIES 5 ENSGT00940000176855 ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00940000153991.b.b.h ENSGT00940000177127 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT00940000177269 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT00940000174564 ENSGT00940000176999 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00940000174824.b ENSGT00940000174824.a ENSGT00940000153655.A.b ENSGT00390000011725.d ENSGT00940000166881 ENSGT00940000159901 Carangaria_A ANCESTRAL SPECIES 2 ENSGT00940000176855 ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00940000153991.b.b.h ENSGT00940000177127 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT00940000177269 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT00940000174564 ENSGT00940000176999 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00940000174824.b ENSGT00940000174824.a ENSGT00940000153655.A.b ENSGT00390000011725.d ENSGT00940000166881 ENSGT00940000159901 Barramundi perch MODERN SPECIES 69 ENSLCAG00010015261 pax3a (ENSLCAG00010015237) ENSLCAG00010015235 ENSLCAG00010015210 EPHB1 (ENSLCAG00010015173) gpc1b (ENSLCAG00010015149) ENSLCAG00010015138 NYAP2 (ENSLCAG00010015132) ENSLCAG00010015106 ENSLCAG00010015099 fgf12a (ENSLCAG00010015070) parla (ENSLCAG00010015057) extl2 (ENSLCAG00010015053) zgc:110366 (ENSLCAG00010015051) RC3H1 (ENSLCAG00010015022) tal1 (ENSLCAG00010015005) #22 ENSLCAG00010014998 otol1a (ENSLCAG00010014994) ppm1la (ENSLCAG00010014988) arl14 (ENSLCAG00010014981) ENSLCAG00010014978 zp3b (ENSLCAG00010014975) ENSLCAG00010014963 zgc:153615 (ENSLCAG00010014949) ENSLCAG00010014944 ENSLCAG00010014942 ENSLCAG00010014932 selenot1a (ENSLCAG00010014927) kif2c (ENSLCAG00010014901) ptch2 (ENSLCAG00010014340) eif2b3 (ENSLCAG00010014270) Seriola ANCESTRAL SPECIES ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000164076.a.b ENSGT00940000158302.d.a.h.b ENSGT00940000164076.b.b ENSGT00940000177127 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT00940000155435.A.b ENSGT00940000177269 ENSGT00940000157030.c.a ENSGT00940000176999 ENSGT00940000174564 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00390000011725.d ENSGT00940000166881 ENSGT00940000159901 ENSGT00510000047486 ENSGT00940000159121 ENSGT00390000016470 ENSGT00390000015663 Greater amberjack MODERN SPECIES 83 ENSSDUG00000018251 EPHB1 (ENSSDUG00000018259) gpc1b (ENSSDUG00000018303) ENSSDUG00000018329 NYAP2 (ENSSDUG00000018340) ENSSDUG00000018357 ENSSDUG00000018371 ENSSDUG00000018389 ENSSDUG00000018407 ENSSDUG00000018466 fgf12a (ENSSDUG00000018495) parla (ENSSDUG00000018634) extl2 (ENSSDUG00000018674) zgc:110366 (ENSSDUG00000018699) RC3H1 (ENSSDUG00000018727) tal1 (ENSSDUG00000018760) #22 otol1a (ENSSDUG00000018779) ENSSDUG00000018795 ppm1la (ENSSDUG00000018805) ENSSDUG00000018827 ENSSDUG00000018834 zp3b (ENSSDUG00000018846) ENSSDUG00000018878 zgc:153615 (ENSSDUG00000018903) selenot1a (ENSSDUG00000018949) kif2c (ENSSDUG00000018974) ptch2 (ENSSDUG00000019200) eif2b3 (ENSSDUG00000019272) plk3 (ENSSDUG00000019309) cacybp (ENSSDUG00000019328) mrps14 (ENSSDUG00000019344) Yellowtail amberjack MODERN SPECIES 2705 ENSSLDG00000014213 ENSSLDG00000014137 EPHB1 (ENSSLDG00000014030) gpc1b (ENSSLDG00000013979) ENSSLDG00000013966 NYAP2 (ENSSLDG00000013924) ENSSLDG00000013864 ENSSLDG00000013798 ENSSLDG00000013779 fgf12a (ENSSLDG00000013749) parla (ENSSLDG00000013704) extl2 (ENSSLDG00000013688) zgc:110366 (ENSSLDG00000013664) RC3H1 (ENSSLDG00000013627) ENSSLDG00000013606 tal1 (ENSSLDG00000013588) #22 otol1a (ENSSLDG00000013550) ppm1la (ENSSLDG00000013530) ENSSLDG00000013522 ENSSLDG00000013510 zp3b (ENSSLDG00000013492) ENSSLDG00000013439 zgc:153615 (ENSSLDG00000013381) selenot1a (ENSSLDG00000013350) kif2c (ENSSLDG00000013301) ptch2 (ENSSLDG00000013192) eif2b3 (ENSSLDG00000013142) plk3 (ENSSLDG00000013119) cacybp (ENSSLDG00000013103) mrps14 (ENSSLDG00000013093) tnn (ENSSLDG00000012941) Pleuronectoidei ANCESTRAL SPECIES 1 ENSGT00940000176855 ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00940000153991.b.b.h ENSGT00940000177127 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT00940000155435.A.b ENSGT00940000177269 ENSGT00940000157030.c.a ENSGT00940000176999 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00940000174824.a ENSGT00940000153655.A.b ENSGT00390000011725.d ENSGT00940000166881 ENSGT00940000159901 ENSGT00510000047486 ENSGT00940000159121 ENSGT00390000016470 Turbot MODERN SPECIES 19 ENSSMAG00000000743 ENSSMAG00000000729 gpc1b (ENSSMAG00000000722) ENSSMAG00000000714 ENSSMAG00000000705 ENSSMAG00000000691 ENSSMAG00000026175 fgf12a (ENSSMAG00000000674) ENSSMAG00000000658 extl2 (ENSSMAG00000000665) ENSSMAG00000000649 ENSSMAG00000028538 ENSSMAG00000000643 ENSSMAG00000000632 otol1a (ENSSMAG00000000614) ENSSMAG00000031028 #22 ENSSMAG00000000608 ENSSMAG00000000605 zp3b (ENSSMAG00000000592) ENSSMAG00000000579 zgc:153615 (ENSSMAG00000000571) ENSSMAG00000000569 ENSSMAG00000024420 selenot1a (ENSSMAG00000000553) ENSSMAG00000000548 ENSSMAG00000000525 ENSSMAG00000000509 plk3 (ENSSMAG00000000488) cacybp (ENSSMAG00000000480) mrps14 (ENSSMAG00000000475) tnn (ENSSMAG00000000444) Tongue sole MODERN SPECIES 12 ENSCSEG00000015902 ENSCSEG00000015916 EPHB1 (ENSCSEG00000015929) gpc1b (ENSCSEG00000015953) ENSCSEG00000015967 NYAP2 (ENSCSEG00000015983) ENSCSEG00000015995 ENSCSEG00000016026 ENSCSEG00000016088 fgf12a (ENSCSEG00000016103) extl2 (ENSCSEG00000016129) zgc:110366 (ENSCSEG00000016144) zgc:110366 (ENSCSEG00000016158) RC3H1 (ENSCSEG00000016173) ENSCSEG00000016198 tal1 (ENSCSEG00000016205) #22 otol1a (ENSCSEG00000016217) ENSCSEG00000016223 ppm1la (ENSCSEG00000016227) ENSCSEG00000016234 zp3b (ENSCSEG00000016238) ENSCSEG00000016254 zgc:153615 (ENSCSEG00000016246) ENSCSEG00000016265 selenot1a (ENSCSEG00000016270) kif2c (ENSCSEG00000016281) ptch2 (ENSCSEG00000016338) eif2b3 (ENSCSEG00000016376) ENSCSEG00000016386 plk3 (ENSCSEG00000016402) cacybp (ENSCSEG00000016415) Ovalentaria ANCESTRAL SPECIES 5 ENSGT00940000176855 ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00940000161675 ENSGT00940000177127 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT01100000266564 ENSGT00940000155435.A.b ENSGT00940000177269 ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT00940000176999 ENSGT00940000174564 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00940000153655.A.b ENSGT00390000011725.d ENSGT00940000180772 ENSGT00940000166881 ENSGT00940000159901 Atherinomorphae ANCESTRAL SPECIES 4 ENSGT00940000176855 ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00940000161675 ENSGT00940000177127 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT00940000177269 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT00940000176999 ENSGT00940000174564 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00390000011725.d ENSGT00940000180772 ENSGT00940000166881 ENSGT00940000159901 ENSGT00940000178325 ENSGT00510000047486 Cyprinodontiformes ANCESTRAL SPECIES 5 ENSGT00940000176855 ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00940000161675 ENSGT00940000177127 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT00940000155435.A.b ENSGT00940000177269 ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT00940000176999 ENSGT00940000174564 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00390000011725.d ENSGT00940000180772 ENSGT00940000166881 ENSGT00940000159901 ENSGT00940000178325 ENSGT00510000047486 Cyprinodontoidei ANCESTRAL SPECIES 2 ENSGT00940000164732.A ENSGT01040000240400.c.a.b.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00940000161675 ENSGT00940000177127 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT00940000177269 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT00940000176999 ENSGT00940000174564 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00390000011725.d ENSGT00940000180772 ENSGT00940000166881 ENSGT00940000159901 ENSGT00940000178325 ENSGT00510000047486 Poeciliinae ANCESTRAL SPECIES 6 ENSGT00940000156504.i.b ENSGT00940000164732.A ENSGT01040000240400.c.a.b.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00940000161675 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT00940000177269 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT00940000174564 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00390000011725.d ENSGT00940000180772 ENSGT00940000166881 ENSGT00940000159901 ENSGT00940000178325 ENSGT00510000047486 ENSGT00940000159121 Poecilia ANCESTRAL SPECIES 16 ENSGT00940000156504.i.b ENSGT00940000164732.A ENSGT01040000240400.c.a.b.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00940000161675 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT00940000177269 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT00940000174564 ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00390000011725.d ENSGT00940000180772 ENSGT00940000166881 ENSGT00940000159901 ENSGT00940000178325 ENSGT00510000047486 ENSGT00940000159121 ENSGT00390000016470 NAME_6 ANCESTRAL SPECIES 191 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT00940000177269 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT00940000174564 ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00390000011725.d ENSGT00940000166881 ENSGT00940000159901 ENSGT00940000178325 ENSGT00510000047486 ENSGT00940000159121 ENSGT00390000016470 ENSGT00390000015663 Amazon molly MODERN SPECIES 452 ENSPFOG00000020068 gpc1b (ENSPFOG00000022579) gpc1b (ENSPFOG00000000489) ENSPFOG00000000627 NYAP2 (ENSPFOG00000000668) COL4A4 (ENSPFOG00000001288) COL4A3 (ENSPFOG00000002745) fgf12a (ENSPFOG00000004697) parla (ENSPFOG00000004749) extl2 (ENSPFOG00000004841) zgc:110366 (ENSPFOG00000004902) RC3H1 (ENSPFOG00000005011) ENSPFOG00000022700 tal1 (ENSPFOG00000005195) #22 ENSPFOG00000022796 otol1a (ENSPFOG00000005216) ppm1la (ENSPFOG00000005253) arl14 (ENSPFOG00000020069) ENSPFOG00000022521 ENSPFOG00000005307 zgc:153615 (ENSPFOG00000005311) selenot1a (ENSPFOG00000022378) kif2c (ENSPFOG00000005351) ptch2 (ENSPFOG00000005637) eif2b3 (ENSPFOG00000005957) plk3 (ENSPFOG00000006121) cacybp (ENSPFOG00000006290) mrps14 (ENSPFOG00000006389) tnn (ENSPFOG00000006449) Sailfin molly MODERN SPECIES 315 parla (ENSPLAG00000017482) extl2 (ENSPLAG00000017470) zgc:110366 (ENSPLAG00000017437) RC3H1 (ENSPLAG00000017430) tal1 (ENSPLAG00000017422) #22 ENSPLAG00000017399 otol1a (ENSPLAG00000017388) ppm1la (ENSPLAG00000017367) arl14 (ENSPLAG00000017362) ENSPLAG00000017349 zgc:153615 (ENSPLAG00000017191) selenot1a (ENSPLAG00000017157) kif2c (ENSPLAG00000017070) ptch2 (ENSPLAG00000017045) ENSPLAG00000016998 eif2b3 (ENSPLAG00000016987) plk3 (ENSPLAG00000016959) cacybp (ENSPLAG00000016953) mrps14 (ENSPLAG00000016949) tnn (ENSPLAG00000016942) Guppy MODERN SPECIES 447 pax3a (ENSPREG00000017001) ENSPREG00000017024 ENSPREG00000017048 ENSPREG00000017080 EPHB1 (ENSPREG00000017113) EPHB1 (ENSPREG00000017215) gpc1b (ENSPREG00000017228) ENSPREG00000017246 ENSPREG00000017258 ENSPREG00000017297 fgf12a (ENSPREG00000017423) extl2 (ENSPREG00000017442) parla (ENSPREG00000017466) zgc:110366 (ENSPREG00000017483) RC3H1 (ENSPREG00000017502) tal1 (ENSPREG00000017524) #22 ENSPREG00000017535 otol1a (ENSPREG00000017545) cactin (ENSPREG00000017563) ENSPREG00000017592 sirt6 (ENSPREG00000017600) ENSPREG00000017618 eef2b (ENSPREG00000017633) BTBD2 (ENSPREG00000017668) UNC13A (ENSPREG00000017708) MEX3D (ENSPREG00000017736) mbd3a (ENSPREG00000017747) UQCR11 (ENSPREG00000017764) ENSPREG00000017774 ONECUT3 (ENSPREG00000017782) ENSPREG00000017796 Platyfish MODERN SPECIES 20 ENSXMAG00000015307 EPHB1 (ENSXMAG00000015310) ENSXMAG00000027321 gpc1b (ENSXMAG00000015397) ENSXMAG00000015422 NYAP2 (ENSXMAG00000015426) ENSXMAG00000024867 ENSXMAG00000021607 ENSXMAG00000015586 fgf12a (ENSXMAG00000015648) parla (ENSXMAG00000026546) extl2 (ENSXMAG00000015664) zgc:110366 (ENSXMAG00000015670) RC3H1 (ENSXMAG00000015673) ENSXMAG00000028390 tal1 (ENSXMAG00000025238) #22 otol1a (ENSXMAG00000029133) ENSXMAG00000027030 ppm1la (ENSXMAG00000015693) ENSXMAG00000025747 arl14 (ENSXMAG00000020356) ENSXMAG00000022097 ENSXMAG00000015695 zgc:153615 (ENSXMAG00000015697) selenot1a (ENSXMAG00000015699) kif2c (ENSXMAG00000015704) ptch2 (ENSXMAG00000015720) eif2b3 (ENSXMAG00000015759) plk3 (ENSXMAG00000015786) cacybp (ENSXMAG00000015822) mrps14 (ENSXMAG00000022794) NAME_4 ANCESTRAL SPECIES 19 ENSGT00940000156504.i.b ENSGT00940000176855 ENSGT00940000156850.a.b ENSGT01040000240400.c.a.b.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000177127 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT00940000177269 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT00940000176999 ENSGT00940000174564 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00390000011725.d ENSGT00940000166881 ENSGT00940000159901 ENSGT00510000047486 ENSGT00940000159121 ENSGT00390000016470 Mummichog MODERN SPECIES 2367 ENSFHEG00000018376 EPHB1 (ENSFHEG00000018421) gpc1b (ENSFHEG00000018438) ENSFHEG00000018458 NYAP2 (ENSFHEG00000018476) ENSFHEG00000018482 ENSFHEG00000000475 ENSFHEG00000018514 ENSFHEG00000018525 fgf12a (ENSFHEG00000018537) parla (ENSFHEG00000018558) extl2 (ENSFHEG00000018586) zgc:110366 (ENSFHEG00000018613) RC3H1 (ENSFHEG00000018634) ENSFHEG00000018644 tal1 (ENSFHEG00000018653) #22 ENSFHEG00000018667 otol1a (ENSFHEG00000018692) ppm1la (ENSFHEG00000018711) arl14 (ENSFHEG00000018721) ENSFHEG00000018738 zp3b (ENSFHEG00000018759) ENSFHEG00000018788 zgc:153615 (ENSFHEG00000018807) Sheepshead minnow MODERN SPECIES 195 EPHB1 (ENSCVAG00000008553) gpc1b (ENSCVAG00000008562) ENSCVAG00000008573 NYAP2 (ENSCVAG00000008584) ENSCVAG00000008592 fgf12a (ENSCVAG00000008602) parla (ENSCVAG00000008662) extl2 (ENSCVAG00000008692) zgc:110366 (ENSCVAG00000008742) RC3H1 (ENSCVAG00000008757) tal1 (ENSCVAG00000008766) #22 ENSCVAG00000008781 otol1a (ENSCVAG00000008798) ppm1la (ENSCVAG00000000878) arl14 (ENSCVAG00000008820) ENSCVAG00000008830 ENSCVAG00000008835 zp3b (ENSCVAG00000008982) ENSCVAG00000009149 zgc:153615 (ENSCVAG00000009177) selenot1a (ENSCVAG00000009192) kif2c (ENSCVAG00000009214) ptch2 (ENSCVAG00000009322) eif2b3 (ENSCVAG00000009355) plk3 (ENSCVAG00000000980) cacybp (ENSCVAG00000009436) Aplocheiloidei ANCESTRAL SPECIES 11 ENSGT00940000156504.i.b ENSGT00940000176855 ENSGT00940000163883.B ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00940000161675 ENSGT01010000228096 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT00940000177269 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00390000011725.d ENSGT00940000180772 ENSGT00940000166881 ENSGT00940000159901 ENSGT00510000047486 ENSGT00940000159121 ENSGT00390000016470 ENSGT00390000015663 Turquoise killifish MODERN SPECIES 1618 ENSNFUG00015009122 GPC1 (ENSNFUG00015009104) ENSNFUG00015019929 ENSNFUG00015019920 NYAP2 (ENSNFUG00015019826) COL4A4 (ENSNFUG00015019810) COL4A3 (ENSNFUG00015019791) ENSNFUG00015019782 ENSNFUG00015019776 FGF12A (ENSNFUG00015019760) parla (ENSNFUG00015019744) EXTL2 (ENSNFUG00015019733) zgc:110366 (ENSNFUG00015019712) RC3H1 (ENSNFUG00015019603) ENSNFUG00015019580 tal1 (ENSNFUG00015019571) #22 ENSNFUG00015019566 otol1a (ENSNFUG00015019563) PPM1LA (ENSNFUG00015019561) ENSNFUG00015019557 ENSNFUG00015019554 ENSNFUG00015019549 zp3b (ENSNFUG00015019541) ENSNFUG00015019488 zgc:153615 (ENSNFUG00015019474) selenot1a (ENSNFUG00015019470) ENSNFUG00015019466 KIF2C (ENSNFUG00015019455) PTCH2 (ENSNFUG00015017908) eif2b3 (ENSNFUG00015017833) PLK3 (ENSNFUG00015017651) Mangrove rivulus MODERN SPECIES 65 extl2 (ENSKMAG00000010127) zgc:110366 (ENSKMAG00000010160) RC3H1 (ENSKMAG00000010226) ENSKMAG00000010314 tal1 (ENSKMAG00000010338) #22 ENSKMAG00000010355 otol1a (ENSKMAG00000010371) ppm1la (ENSKMAG00000010393) arl14 (ENSKMAG00000010409) zp3b (ENSKMAG00000010427) ENSKMAG00000010454 zgc:153615 (ENSKMAG00000010504) selenot1a (ENSKMAG00000010559) kif2c (ENSKMAG00000010632) ptch2 (ENSKMAG00000010751) eif2b3 (ENSKMAG00000010865) plk3 (ENSKMAG00000010910) cacybp (ENSKMAG00000010932) mrps14 (ENSKMAG00000010949) tnn (ENSKMAG00000010978) Oryzias ANCESTRAL SPECIES 12 ENSGT00940000175758 ENSGT00940000156504.i.b ENSGT00940000176855 ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000177127 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT00940000174564 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00390000011725.d ENSGT00940000166881 ENSGT00940000159901 ENSGT00510000047486 ENSGT00940000159121 ENSGT00390000016470 ENSGT00390000015663 ENSGT00940000166882 ENSGT00940000178718 Oryzias_b ANCESTRAL SPECIES 8 ENSGT00940000175758 ENSGT00940000156504.i.b ENSGT00940000176855 ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000177127 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT00940000174564 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00390000011725.d ENSGT00940000166881 ENSGT00940000159901 ENSGT00510000047486 ENSGT00940000159121 ENSGT00390000016470 ENSGT00390000015663 ENSGT00940000166882 ENSGT00940000178718 Indian medaka MODERN SPECIES 317 ENSOMEG00000016529 ENSOMEG00000016536 fgf12a (ENSOMEG00000016587) parla (ENSOMEG00000016625) extl2 (ENSOMEG00000016658) zgc:110366 (ENSOMEG00000016691) RC3H1 (ENSOMEG00000016784) ENSOMEG00000016822 tal1 (ENSOMEG00000016840) #22 ppm1la (ENSOMEG00000016870) arl14 (ENSOMEG00000016904) ENSOMEG00000016917 zp3b (ENSOMEG00000016945) ENSOMEG00000016972 zgc:153615 (ENSOMEG00000016996) selenot1a (ENSOMEG00000017008) kif2c (ENSOMEG00000017146) Javanese ricefish MODERN SPECIES 8 ENSOJAG00000012087 pax3a (ENSOJAG00000012102) ENSOJAG00000012164 EPHB1 (ENSOJAG00000012227) gpc1b (ENSOJAG00000012706) ENSOJAG00000012732 ENSOJAG00000012741 ENSOJAG00000012755 ENSOJAG00000012763 fgf12a (ENSOJAG00000012780) parla (ENSOJAG00000012846) extl2 (ENSOJAG00000012935) zgc:110366 (ENSOJAG00000012943) RC3H1 (ENSOJAG00000012972) ENSOJAG00000013029 tal1 (ENSOJAG00000013037) #22 ppm1la (ENSOJAG00000013042) arl14 (ENSOJAG00000013074) ENSOJAG00000013223 zgc:153615 (ENSOJAG00000013346) selenot1a (ENSOJAG00000013364) kif2c (ENSOJAG00000013431) ptch2 (ENSOJAG00000013535) eif2b3 (ENSOJAG00000013829) plk3 (ENSOJAG00000013864) cacybp (ENSOJAG00000014171) mrps14 (ENSOJAG00000014179) tnn (ENSOJAG00000014209) ENSOJAG00000014358 tnr (ENSOJAG00000014464) amotl2b (ENSOJAG00000015851) Oryzias_a ANCESTRAL SPECIES 7 ENSGT00940000175758 ENSGT00940000156504.i.b ENSGT00940000176855 ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000177127 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT00940000174564 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00390000011725.d ENSGT00940000166881 ENSGT00940000159901 ENSGT00510000047486 ENSGT00940000159121 ENSGT00390000016470 ENSGT00390000015663 ENSGT00940000166882 ENSGT00620000089392 Chinese medaka MODERN SPECIES 5320 EPHB1 (ENSOSIG00000010338) gpc1b (ENSOSIG00000012841) ENSOSIG00000012843 NYAP2 (ENSOSIG00000012844) ENSOSIG00000012846 fgf12a (ENSOSIG00000012849) parla (ENSOSIG00000012853) extl2 (ENSOSIG00000012946) ENSOSIG00000012947 ENSOSIG00000012949 zgc:110366 (ENSOSIG00000012952) RC3H1 (ENSOSIG00000012957) ENSOSIG00000012960 tal1 (ENSOSIG00000012963) #22 ppm1la (ENSOSIG00000012964) arl14 (ENSOSIG00000012966) ENSOSIG00000012968 zp3b (ENSOSIG00000012969) ENSOSIG00000012970 zgc:153615 (ENSOSIG00000012992) selenot1a (ENSOSIG00000012999) ENSOSIG00000013005 ptch2 (ENSOSIG00000013032) eif2b3 (ENSOSIG00000014413) tnn (ENSOSIG00000014417) ENSOSIG00000014518 tnr (ENSOSIG00000014564) Japanese Medaka HdrR MODERN SPECIES 8 ENSORLG00000029273 pax3a (ENSORLG00000015932) ENSORLG00000025468 ENSORLG00000027708 ENSORLG00000022322 EPHB1 (ENSORLG00000015972) gpc1b (ENSORLG00000015992) ENSORLG00000023589 ENSORLG00000016002 fgf12a (ENSORLG00000016010) parla (ENSORLG00000016015) extl2 (ENSORLG00000016019) zgc:110366 (ENSORLG00000016026) RC3H1 (ENSORLG00000016041) ENSORLG00000029899 tal1 (ENSORLG00000030528) #22 ppm1la (ENSORLG00000016050) ENSORLG00000026064 arl14 (ENSORLG00000027330) zp3b (ENSORLG00000016064) zgc:153615 (ENSORLG00000016074) ENSORLG00000016070 selenot1a (ENSORLG00000016078) ENSORLG00000016095 ptch2 (ENSORLG00000016137) eif2b3 (ENSORLG00000016154) plk3 (ENSORLG00000016212) cacybp (ENSORLG00000016233) mrps14 (ENSORLG00000016235) tnn (ENSORLG00000016248) ENSORLG00000026874 Ovalentaria_B ANCESTRAL SPECIES 6 ENSGT00940000176855 ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00940000161675 ENSGT00940000177127 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT01100000266564 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT00940000174564 ENSGT00940000176999 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00940000153655.A.b ENSGT00390000011725.d ENSGT00940000166881 ENSGT00940000178325 ENSGT00940000159901 ENSGT00510000047486 Pomacentridae ANCESTRAL SPECIES 6 ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00980000198753 ENSGT00940000161675 ENSGT00940000177127 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT01100000266564 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT00940000174564 ENSGT00940000176999 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00940000153655.A.b ENSGT00390000011725.d ENSGT00940000166881 ENSGT00940000159901 ENSGT00940000178325 ENSGT00510000047486 Pomacentridae_A ANCESTRAL SPECIES 5 ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00980000198753 ENSGT00940000161675 ENSGT00940000177127 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT01100000266564 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00940000174564 ENSGT00940000176999 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00940000153655.A.b ENSGT00390000011725.d ENSGT00940000166881 ENSGT00940000159901 ENSGT00940000178325 ENSGT00510000047486 ENSGT00940000159121 Amphiprion ANCESTRAL SPECIES 48 ENSGT00940000156504.i.b ENSGT00940000176855 ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00940000161675 ENSGT00940000177127 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00940000159889.b.b #22 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00940000176999 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00940000153655.A.b ENSGT00390000011725.d ENSGT00940000166881 ENSGT00940000159901 ENSGT00940000178325 ENSGT00510000047486 ENSGT00940000159121 ENSGT00390000016470 ENSGT00390000015663 Clown anemonefish MODERN SPECIES 1319 ENSAOCG00000001324 ENSAOCG00000018469 hsd17b14 (ENSAOCG00000018701) bcat2 (ENSAOCG00000018777) gpc1b (ENSAOCG00000001347) ENSAOCG00000001350 NYAP2 (ENSAOCG00000018854) ENSAOCG00000018866 ENSAOCG00000018897 ENSAOCG00000018915 fgf12a (ENSAOCG00000018967) parla (ENSAOCG00000018995) extl2 (ENSAOCG00000019030) zgc:110366 (ENSAOCG00000019073) RC3H1 (ENSAOCG00000019101) tal1 (ENSAOCG00000019123) #22 otol1a (ENSAOCG00000019146) ppm1la (ENSAOCG00000019174) ENSAOCG00000019191 zp3b (ENSAOCG00000019217) ENSAOCG00000019258 zgc:153615 (ENSAOCG00000019291) ENSAOCG00000001394 selenot1a (ENSAOCG00000019369) vasna (ENSAOCG00000019382) ENSAOCG00000019395 ENSAOCG00000019405 ENSAOCG00000001408 GLIS2 (ENSAOCG00000019428) Orange clownfish MODERN SPECIES 1 ENSAPEG00000009018 ENSAPEG00000008982 EPHB1 (ENSAPEG00000008922) ENSAPEG00000008915 gpc1b (ENSAPEG00000008886) ENSAPEG00000008828 NYAP2 (ENSAPEG00000008807) ENSAPEG00000008737 ENSAPEG00000008716 fgf12a (ENSAPEG00000008696) ENSAPEG00000008677 parla (ENSAPEG00000008660) extl2 (ENSAPEG00000008632) zgc:110366 (ENSAPEG00000008585) RC3H1 (ENSAPEG00000008567) tal1 (ENSAPEG00000008547) #22 otol1a (ENSAPEG00000008517) ppm1la (ENSAPEG00000008496) ENSAPEG00000008481 zp3b (ENSAPEG00000008454) ENSAPEG00000008423 zgc:153615 (ENSAPEG00000008378) ENSAPEG00000008367 selenot1a (ENSAPEG00000008341) kif2c (ENSAPEG00000008271) ENSAPEG00000008257 ptch2 (ENSAPEG00000008183) eif2b3 (ENSAPEG00000008131) plk3 (ENSAPEG00000008118) cacybp (ENSAPEG00000008106) mrps14 (ENSAPEG00000008095) Spiny chromis MODERN SPECIES 208 EPHB1 (ENSAPOG00000004178) gpc1b (ENSAPOG00000004196) ENSAPOG00000004203 NYAP2 (ENSAPOG00000004210) ENSAPOG00000004252 ENSAPOG00000004301 ENSAPOG00000004315 fgf12a (ENSAPOG00000004345) parla (ENSAPOG00000000103) extl2 (ENSAPOG00000004406) zgc:110366 (ENSAPOG00000004441) RC3H1 (ENSAPOG00000004471) ENSAPOG00000004482 tal1 (ENSAPOG00000004514) #22 ENSAPOG00000004533 otol1a (ENSAPOG00000004550) ppm1la (ENSAPOG00000004578) ENSAPOG00000004593 ENSAPOG00000004603 zp3b (ENSAPOG00000004629) ENSAPOG00000004686 zgc:153615 (ENSAPOG00000004717) Bicolor damselfish MODERN SPECIES 1049 fgf12a (ENSSPAG00000014293) parla (ENSSPAG00000014306) extl2 (ENSSPAG00000014347) zgc:110366 (ENSSPAG00000014362) RC3H1 (ENSSPAG00000014400) ENSSPAG00000014491 tal1 (ENSSPAG00000014508) #22 otol1a (ENSSPAG00000014514) ppm1la (ENSSPAG00000014526) arl14 (ENSSPAG00000014539) ENSSPAG00000014551 zp3b (ENSSPAG00000014556) ENSSPAG00000014573 zgc:153615 (ENSSPAG00000014590) selenot1a (ENSSPAG00000014623) RSPH6A (ENSSPAG00000014668) kif2c (ENSSPAG00000014687) ptch2 (ENSSPAG00000014742) ENSSPAG00000014831 eif2b3 (ENSSPAG00000014843) Cichlidae ANCESTRAL SPECIES 2 ENSGT00940000156504.i.b ENSGT00940000176855 ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00940000161675 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT00940000176999 ENSGT00940000174564 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00940000153655.A.b ENSGT00390000011725.d ENSGT00940000166881 ENSGT00940000178325 ENSGT00940000159901 ENSGT00510000047486 ENSGT00940000159121 Midas cichlid MODERN SPECIES 641 ENSACIG00000012584 EPHB1 (ENSACIG00000012640) gpc1b (ENSACIG00000012692) ENSACIG00000012920 ENSACIG00000012941 ENSACIG00000012961 ENSACIG00000012977 ENSACIG00000013006 fgf12a (ENSACIG00000013033) parla (ENSACIG00000013050) extl2 (ENSACIG00000013083) zgc:110366 (ENSACIG00000013101) RC3H1 (ENSACIG00000013122) tal1 (ENSACIG00000013199) #22 otol1a (ENSACIG00000013211) ppm1la (ENSACIG00000013233) arl14 (ENSACIG00000013244) zp3b (ENSACIG00000013260) ENSACIG00000013360 zgc:153615 (ENSACIG00000013395) selenot1a (ENSACIG00000013410) kif2c (ENSACIG00000013426) ptch2 (ENSACIG00000013458) eif2b3 (ENSACIG00000013509) plk3 (ENSACIG00000013540) cacybp (ENSACIG00000013645) mrps14 (ENSACIG00000013818) tnn (ENSACIG00000013846) tnr (ENSACIG00000013884) Pseudocrenilabrinae ANCESTRAL SPECIES 7 ENSGT00940000156504.i.b ENSGT00940000176855 ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00940000161675 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT00940000176999 ENSGT00940000174564 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00940000153655.A.b ENSGT00390000011725.d ENSGT00940000166881 ENSGT00940000178325 ENSGT00940000159901 ENSGT00510000047486 ENSGT00940000159121 Nile tilapia MODERN SPECIES 9 ENSONIG00000010024 EPHB1 (ENSONIG00000010010) gpc1b (ENSONIG00000010001) ENSONIG00000009999 NYAP2 (ENSONIG00000036544) ENSONIG00000033140 ENSONIG00000034233 ENSONIG00000034694 ENSONIG00000039576 fgf12a (ENSONIG00000009975) parla (ENSONIG00000009971) extl2 (ENSONIG00000009969) zgc:110366 (ENSONIG00000009967) ENSONIG00000027722 RC3H1 (ENSONIG00000009961) tal1 (ENSONIG00000040938) #22 otol1a (ENSONIG00000009958) ppm1la (ENSONIG00000030738) ENSONIG00000032045 ENSONIG00000040503 zp3b (ENSONIG00000009952) ENSONIG00000009951 zgc:153615 (ENSONIG00000009947) selenot1a (ENSONIG00000040872) kif2c (ENSONIG00000009940) ptch2 (ENSONIG00000009936) plk3 (ENSONIG00000009923) cacybp (ENSONIG00000009918) mrps14 (ENSONIG00000038631) tnn (ENSONIG00000009909) tnr (ENSONIG00000009896) Pseudocrenilabrinae_A ANCESTRAL SPECIES 4 ENSGT00940000156504.i.b ENSGT00940000176855 ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00940000161675 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT00940000174564 ENSGT00940000176999 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00940000153655.A.b ENSGT00390000011725.d ENSGT00940000166881 ENSGT00940000178325 ENSGT00940000159901 ENSGT00510000047486 ENSGT00940000159121 Haplochromini ANCESTRAL SPECIES 2 ENSGT00940000156504.i.b ENSGT00940000176855 ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00940000161675 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00940000153655.A.b ENSGT00390000011725.d ENSGT00940000166881 ENSGT00940000159901 ENSGT00510000047486 ENSGT00940000159121 ENSGT00390000016470 ENSGT00390000015663 ENSGT00940000166882 Burton s mouthbrooder MODERN SPECIES 271 EPHB1 (ENSHBUG00000002547) gpc1b (ENSHBUG00000002565) ENSHBUG00000002578 NYAP2 (ENSHBUG00000002596) ENSHBUG00000002606 ENSHBUG00000002622 fgf12a (ENSHBUG00000002641) parla (ENSHBUG00000002666) extl2 (ENSHBUG00000000048) RC3H1 (ENSHBUG00000002725) ENSHBUG00000000055 tal1 (ENSHBUG00000000060) #22 otol1a (ENSHBUG00000002742) ppm1la (ENSHBUG00000002749) arl14 (ENSHBUG00000001159) zp3b (ENSHBUG00000002756) ENSHBUG00000002765 zgc:153615 (ENSHBUG00000002782) ENSHBUG00000002790 selenot1a (ENSHBUG00000002802) ptch2 (ENSHBUG00000002892) eif2b3 (ENSHBUG00000002930) plk3 (ENSHBUG00000002987) cacybp (ENSHBUG00000002998) mrps14 (ENSHBUG00000003003) tnn (ENSHBUG00000003048) tnr (ENSHBUG00000003138) Haplochromini_A ANCESTRAL SPECIES 3 ENSGT00940000156504.i.b ENSGT00940000176855 ENSGT00940000156850.a.b ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00940000161675 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00940000153655.A.b ENSGT00390000011725.d ENSGT00940000166881 ENSGT00940000159901 ENSGT00510000047486 ENSGT00940000159121 ENSGT00390000016470 ENSGT00390000015663 ENSGT00940000166882 Haplochromini_B ANCESTRAL SPECIES 12 ENSGT00940000176855 ENSGT00940000156850.a.b ENSGT00940000164732.A ENSGT00940000155297.hb.a ENSGT01050000244897.a.a.b.a ENSGT01050000244955.b.d ENSGT00890000139453.b.e.a ENSGT00940000153991.a.b.a ENSGT00940000161675 ENSGT00940000155929.a.b.b ENSGT00390000013063.v ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00940000153655.A.b ENSGT00390000011725.d ENSGT00940000166881.e ENSGT00940000159901 ENSGT00510000047486 ENSGT00940000159121 ENSGT00390000016470 ENSGT00390000015663 ENSGT00940000166882 Eastern happy MODERN SPECIES 9 ENSACLG00000027235 ENSACLG00000027208 EPHB1 (ENSACLG00000027191) gpc1b (ENSACLG00000027186) ENSACLG00000027171 NYAP2 (ENSACLG00000027161) COL4A4 (ENSACLG00000027140) ENSACLG00000027135 ENSACLG00000027084 fgf12a (ENSACLG00000027076) parla (ENSACLG00000027052) extl2 (ENSACLG00000027044) zgc:110366 (ENSACLG00000027027) RC3H1 (ENSACLG00000027015) ENSACLG00000027009 tal1 (ENSACLG00000027002) #22 otol1a (ENSACLG00000026992) ppm1la (ENSACLG00000026989) arl14 (ENSACLG00000026984) zp3b (ENSACLG00000026979) ENSACLG00000026968 zgc:153615 (ENSACLG00000026950) ENSACLG00000026943 selenot1a (ENSACLG00000026938) kif2c (ENSACLG00000026913) ptch2 (ENSACLG00000026878) eif2b3 (ENSACLG00000026854) plk3 (ENSACLG00000026812) cacybp (ENSACLG00000026802) mrps14 (ENSACLG00000026797) tnn (ENSACLG00000026659) Zebra mbuna MODERN SPECIES 1100 ENSMZEG00005025531 ENSMZEG00005025529 ENSMZEG00005025527 EPHB1 (ENSMZEG00005025526) gpc1b (ENSMZEG00005025525) ENSMZEG00005025524 NYAP2 (ENSMZEG00005025523) COL4A4 (ENSMZEG00005025522) ENSMZEG00005025521 fgf12a (ENSMZEG00005025520) parla (ENSMZEG00005025518) extl2 (ENSMZEG00005025517) zgc:110366 (ENSMZEG00005025516) RC3H1 (ENSMZEG00005025514) ENSMZEG00005025512 tal1 (ENSMZEG00005025511) #22 otol1a (ENSMZEG00005025509) ppm1la (ENSMZEG00005025507) arl14 (ENSMZEG00005025506) zp3b (ENSMZEG00005025504) ENSMZEG00005025502 zgc:153615 (ENSMZEG00005025501) selenot1a (ENSMZEG00005025499) kif2c (ENSMZEG00005025496) ptch2 (ENSMZEG00005025492) eif2b3 (ENSMZEG00005025489) plk3 (ENSMZEG00005025485) cacybp (ENSMZEG00005025482) mrps14 (ENSMZEG00005025480) tnn (ENSMZEG00005025474) tnr (ENSMZEG00005025469) P. nyererei MODERN SPECIES 299 ENSPNYG00000009562 EPHB1 (ENSPNYG00000009615) gpc1b (ENSPNYG00000009663) ENSPNYG00000009683 NYAP2 (ENSPNYG00000009704) ENSPNYG00000009740 ENSPNYG00000009870 ENSPNYG00000009884 ENSPNYG00000009914 fgf12a (ENSPNYG00000010034) parla (ENSPNYG00000010053) extl2 (ENSPNYG00000010090) zgc:110366 (ENSPNYG00000010110) RC3H1 (ENSPNYG00000010135) ENSPNYG00000010155 tal1 (ENSPNYG00000010165) #22 otol1a (ENSPNYG00000010186) ppm1la (ENSPNYG00000010210) ENSPNYG00000010226 zp3b (ENSPNYG00000010245) ENSPNYG00000010300 zgc:153615 (ENSPNYG00000010449) selenot1a (ENSPNYG00000010467) ptch2 (ENSPNYG00000010497) eif2b3 (ENSPNYG00000010560) plk3 (ENSPNYG00000010602) cacybp (ENSPNYG00000010638) mrps14 (ENSPNYG00000010650) tnn (ENSPNYG00000010670) tnr (ENSPNYG00000010743) ENSPNYG00000010799 Lyretail cichlid MODERN SPECIES 300 acsl3b (ENSNBRG00000017206) ENSNBRG00000017187 pax3a (ENSNBRG00000017165) ENSNBRG00000017153 ENSNBRG00000017105 EPHB1 (ENSNBRG00000017068) gpc1b (ENSNBRG00000016954) ENSNBRG00000016879 NYAP2 (ENSNBRG00000016862) ENSNBRG00000016792 fgf12a (ENSNBRG00000016757) parla (ENSNBRG00000016725) extl2 (ENSNBRG00000016705) zgc:110366 (ENSNBRG00000016676) RC3H1 (ENSNBRG00000016656) tal1 (ENSNBRG00000016619) #22 otol1a (ENSNBRG00000016600) ppm1la (ENSNBRG00000016578) ENSNBRG00000016565 ENSNBRG00000016551 zp3b (ENSNBRG00000016450) ENSNBRG00000016403 zgc:153615 (ENSNBRG00000016381) ENSNBRG00000016371 kif2c (ENSNBRG00000016322) ENSNBRG00000016308 ptch2 (ENSNBRG00000016256) eif2b3 (ENSNBRG00000016204) plk3 (ENSNBRG00000016132) cacybp (ENSNBRG00000016069) mrps14 (ENSNBRG00000016055) Pinecone sodierfish MODERN SPECIES 8 ENSMMDG00005010382 ENSMMDG00005010384 EPHB1 (ENSMMDG00005010395) gpc1b (ENSMMDG00005010418) ENSMMDG00005010485 NYAP2 (ENSMMDG00005010486) ENSMMDG00005010488 ENSMMDG00005010495 ENSMMDG00005001322 ENSMMDG00005001333 fgf12a (ENSMMDG00005001351) parla (ENSMMDG00005001402) extl2 (ENSMMDG00005001411) zgc:110366 (ENSMMDG00005001419) RC3H1 (ENSMMDG00005001442) tal1 (ENSMMDG00005001461) #22 otol1a (ENSMMDG00005001475) ppm1la (ENSMMDG00005001504) zp3b (ENSMMDG00005001512) ENSMMDG00005001522 ENSMMDG00005001528 ENSMMDG00005001538 zgc:153615 (ENSMMDG00005001566) ENSMMDG00005001577 selenot1a (ENSMMDG00005001594) kif2c (ENSMMDG00005001632) ptch2 (ENSMMDG00005001661) eif2b3 (ENSMMDG00005001678) plk3 (ENSMMDG00005001739) cacybp (ENSMMDG00005002244) mrps14 (ENSMMDG00005002247) Cod MODERN SPECIES 21 tcea1 (ENSGMOG00000017136) ENSGMOG00000024433 viml (ENSGMOG00000017198) ENSGMOG00000025574 neurod6b (ENSGMOG00000022346) ENSGMOG00000029523 ENSGMOG00000032704 ENSGMOG00000028511 ENSGMOG00000033226 ENSGMOG00000023836 ENSGMOG00000023934 adcyap1r1a (ENSGMOG00000001536) ghrhra (ENSGMOG00000001519) ENSGMOG00000005886 ENSGMOG00000031113 ENSGMOG00000005856 #22 otol1a (ENSGMOG00000029578) ENSGMOG00000029178 ENSGMOG00000005815 ENSGMOG00000024132 ENSGMOG00000028038 zp3b (ENSGMOG00000005796) ENSGMOG00000029119 ENSGMOG00000034234 eif2b3 (ENSGMOG00000014081) ENSGMOG00000015061 kif2c (ENSGMOG00000015127) ENSGMOG00000015479 ENSGMOG00000023442 plk3 (ENSGMOG00000012624) ENSGMOG00000012621 Protacanthopterygii DUPLICATION Protacanthopterygii DUPLICATION Protacanthopterygii ANCESTRAL SPECIES 60 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b.a.a #22 ENSGT00940000155435.A.b ENSGT00940000157030.c.a ENSGT00940000165275.A ENSGT00940000174564 ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d ENSGT00940000153655.A.b ENSGT00390000011725.d ENSGT00940000161729.m.a ENSGT00940000157384.a ENSGT00940000159223.d ENSGT00950000182903.a.a.d ENSGT00900000141083.c.a ENSGT00940000160165.b Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 83 ENSGT00950000182996.b.a.a.a.a ENSGT00940000164732.B ENSGT00950000183138.a.a.b.v.b.d ENSGT01030000234667.a.a.a.b.b.c ENSGT00940000157353 ENSGT00940000157414 ENSGT00940000157143.c.b.e ENSGT00940000159889.b.b.a.a.a #22 ENSGT00940000177269 ENSGT00940000155435.A.b ENSGT00940000157030.c.a.e ENSGT00940000174564.f ENSGT00990000213680 ENSGT00390000011127.d.c ENSGT00390000011725.d.y ENSGT00940000180772 ENSGT00940000161729.m.a.a ENSGT00940000157384.a.c ENSGT00940000159223.d.b ENSGT00950000182903.a.a.d.f ENSGT00900000141083.c.a.b ENSGT00940000160165.b ENSGT00940000159675.b Huchen MODERN SPECIES 791 ENSHHUG00000035337 ENSHHUG00000035371 ENSHHUG00000035401 ENSHHUG00000035403 ACKR4 (ENSHHUG00000035406) e2f5 (ENSHHUG00000035411) ENSHHUG00000035425 ENSHHUG00000035460 RC3H1 (ENSHHUG00000035464) ENSHHUG00000035490 #22 otol1a (ENSHHUG00000035494) ppm1la (ENSHHUG00000035505) ENSHHUG00000035514 zgc:153615 (ENSHHUG00000035531) selenot1a (ENSHHUG00000035549) SERP1 (ENSHHUG00000035561) pcyt1aa (ENSHHUG00000035564) AP2M1 (ENSHHUG00000035608) dvl3a (ENSHHUG00000035656) copb2 (ENSHHUG00000035698) rbp2b (ENSHHUG00000035941) rbp1.1 (ENSHHUG00000035953) ENSHHUG00000035966 Salmoninae_a ANCESTRAL SPECIES 2 ENSGT00940000157757.g.b.b ENSGT00940000159221.k.a ENSGT00930000151041.g.b ENSGT00940000166019.m.a ENSGT00530000063751.a.b.e ENSGT00390000012568.k.a ENSGT00940000156236.b.b ENSGT00390000010743.a.b.c ENSGT00950000182996.b.a.a.a.a ENSGT00940000164732.B ENSGT00950000183138.a.a.b.v.b.d ENSGT01030000234667.a.a.a.b.b.c ENSGT00940000157353 ENSGT00940000157414 ENSGT00940000157143.c.b.e ENSGT00940000159889.b.b.a.a.a #22 ENSGT00940000177269 ENSGT00940000155435.A.b ENSGT00940000157030.c.a.e ENSGT00940000174564.f ENSGT00990000213680 ENSGT00390000011127.d.c ENSGT00390000011725.d.y ENSGT00940000180772 ENSGT00940000161729.m.a.a ENSGT00940000157384.a.c ENSGT00940000159223.d.b ENSGT00950000182903.a.a.d.f ENSGT00900000141083.c.a.b ENSGT00940000160165.b ENSGT00940000159675.b Salmo ANCESTRAL SPECIES 35 ENSGT00930000151041.g.b ENSGT00990000211171 ENSGT00940000166019.m.a ENSGT00530000063751.a.b.e ENSGT00390000012568.k.a ENSGT00940000156236.b.b ENSGT00390000010743.a.b.c ENSGT00940000154654.a.a.a.a ENSGT00950000182996.b.a.a.a.a ENSGT00940000164732.B ENSGT00950000183138.a.a.b.v.b.d ENSGT01030000234667.a.a.a.b.b.c ENSGT00940000157353 ENSGT00940000157414 ENSGT00940000157143.c.b.e ENSGT00940000159889.b.b.a.a.a #22 ENSGT00940000155435.A.b ENSGT00940000157030.c.a.e ENSGT00990000213680 ENSGT00390000011127.d.c ENSGT00390000011725.d.y ENSGT00940000180772 ENSGT00940000161729.m.a.a ENSGT00940000157384.a.c ENSGT00940000159223.d.b ENSGT00950000182903.a.a.d.f ENSGT00900000141083.c.a.b ENSGT00940000160165.b ENSGT00940000159675.b ENSGT00990000213390 ENSGT00950000183086.a.a.b.h.b.c River trout MODERN SPECIES 13 dusp12 (ENSSTUG00000028003) ENSSTUG00000027991 ENSSTUG00000026841 prg4a (ENSSTUG00000026803) odr4 (ENSSTUG00000026782) PDC (ENSSTUG00000026776) ptgs2a (ENSSTUG00000026620) ARPC5 (ENSSTUG00000026601) ENSSTUG00000026594 ENSSTUG00000026571 ENSSTUG00000026541 ACKR4 (ENSSTUG00000026536) e2f5 (ENSSTUG00000026526) ENSSTUG00000026031 RC3H1 (ENSSTUG00000025995) ENSSTUG00000025987 #22 otol1a (ENSSTUG00000025973) ppm1la (ENSSTUG00000025944) zgc:153615 (ENSSTUG00000025922) selenot1a (ENSSTUG00000025910) ENSSTUG00000025900 SERP1 (ENSSTUG00000025883) pcyt1aa (ENSSTUG00000025829) AP2M1 (ENSSTUG00000025794) DVL3 (ENSSTUG00000025749) copb2 (ENSSTUG00000047339) rbp1.1 (ENSSTUG00000047325) ENSSTUG00000047323 clstn2a (ENSSTUG00000046411) ENSSTUG00000046381 zgc:136870 (ENSSTUG00000046379) Atlantic salmon MODERN SPECIES 5 ENSSSAG00000044544 ENSSSAG00000041320 ENSSSAG00000087784 odr4 (ENSSSAG00000041211) PDC (ENSSSAG00000090071) ptgs2a (ENSSSAG00000040725) arpc5 (ENSSSAG00000090774) ENSSSAG00000040650 ENSSSAG00000040598 ENSSSAG00000040548 ENSSSAG00000114496 ENSSSAG00000103244 e2f5 (ENSSSAG00000040523) ENSSSAG00000040265 ENSSSAG00000039607 ENSSSAG00000104922 #22 ENSSSAG00000039453 ENSSSAG00000090809 ENSSSAG00000039248 zgc:153615 (ENSSSAG00000085417) selenot1a (ENSSSAG00000039142) ENSSSAG00000075155 pcyt1aa (ENSSSAG00000075137) ENSSSAG00000075127 ENSSSAG00000074540 copb2 (ENSSSAG00000074067) RBP2 (ENSSSAG00000074042) RET1 (ENSSSAG00000074041) ENSSSAG00000074039 ENSSSAG00000111638 clstn2a (ENSSSAG00000073830) Oncorhynchus ANCESTRAL SPECIES 11 ENSGT00940000159221.k.a ENSGT01020000231030 ENSGT00990000211171 ENSGT00940000166019.m.a ENSGT00530000063751.a.b.e ENSGT00390000012568.k.a ENSGT00940000156236.b.b ENSGT00390000010743.a.b.c ENSGT00940000154654.a.a.a.b.a ENSGT00940000164732.B ENSGT00950000183138.a.a.b.v.b.d ENSGT01030000234667.a.a.a.b.b.c ENSGT00940000157353 ENSGT00940000157414 ENSGT00940000157143.c.b.e ENSGT00940000159889.b.b.a.a.a #22 ENSGT00940000177269 ENSGT00940000155435.A.b ENSGT00940000157030.c.a.e ENSGT00940000174564.f ENSGT00390000011127.d.c ENSGT00390000011725.d.y ENSGT00940000180772 ENSGT00940000161729.m.a.a ENSGT00940000157384.a.c ENSGT00940000159223.d.b ENSGT00950000182903.a.a.d.f ENSGT00900000141083.c.a.b ENSGT00940000160165.b ENSGT00940000159675.b ENSGT00950000183086.a.a.b.h.b.c Oncorhynchus_a ANCESTRAL SPECIES 37 ENSGT00940000159221.k.a ENSGT01020000231030 ENSGT00990000211171 ENSGT00940000166019.m.a ENSGT00530000063751.a.b.e ENSGT00390000012568.k.a ENSGT00940000156236.b.b ENSGT00390000010743.a.b.c ENSGT00940000154654.a.a.a.b.a ENSGT00940000164732.B ENSGT00950000183138.a.a.b.v.b.d ENSGT01030000234667.a.a.a.b.b.c ENSGT00940000157353 ENSGT00940000157414 ENSGT00940000157143.c.b.e ENSGT00940000159889.b.b.a.a.a #22 ENSGT00940000177269 ENSGT00940000155435.A.b ENSGT00940000157030.c.a.e ENSGT00940000174564.f ENSGT00390000011127.d.c ENSGT00390000011725.d.y ENSGT00940000180772 ENSGT00940000161729.m.a.a ENSGT00940000157384.a.c ENSGT00940000159223.d.b ENSGT00950000182903.a.a.d.f ENSGT00900000141083.c.a.b ENSGT00940000160165.b ENSGT00940000159675.b ENSGT00950000183086.a.a.b.h.b.c Coho salmon MODERN SPECIES 23 ENSOKIG00005039204 ENSOKIG00005038966 ENSOKIG00005038592 ENSOKIG00005038556 odr4 (ENSOKIG00005038512) PDC (ENSOKIG00005038506) ptgs2a (ENSOKIG00005037367) ARPC5 (ENSOKIG00005037254) ENSOKIG00005037216 ENSOKIG00005037160 ACKR4 (ENSOKIG00005037150) e2f5 (ENSOKIG00005037133) ENSOKIG00005037129 ENSOKIG00005037019 RC3H1 (ENSOKIG00005036932) ENSOKIG00005036921 #22 ENSOKIG00005036901 otol1a (ENSOKIG00005036876) PPM1L (ENSOKIG00005036858) ENSOKIG00005036839 zgc:153615 (ENSOKIG00005036820) selenot1a (ENSOKIG00005036806) ENSOKIG00005036801 SERP1 (ENSOKIG00005036785) pcyt1aa (ENSOKIG00005036745) AP2M1 (ENSOKIG00005036681) DVL3 (ENSOKIG00005036594) ENSOKIG00005035958 rbp1.1 (ENSOKIG00005035895) clstn2a (ENSOKIG00005034701) ENSOKIG00005034614 Chinook salmon MODERN SPECIES 1 ENSOTSG00005035738 ENSOTSG00005035736 ENSOTSG00005035731 ENSOTSG00005035726 odr4 (ENSOTSG00005035717) PDC (ENSOTSG00005035714) ptgs2a (ENSOTSG00005035249) ARPC5 (ENSOTSG00005035245) ENSOTSG00005035243 ENSOTSG00005035242 ENSOTSG00005035241 ACKR4 (ENSOTSG00005035239) e2f5 (ENSOTSG00005035238) ENSOTSG00005035237 RC3H1 (ENSOTSG00005035236) ENSOTSG00005035234 #22 otol1a (ENSOTSG00005035233) ppm1la (ENSOTSG00005035232) ENSOTSG00005035231 zgc:153615 (ENSOTSG00005035230) selenot1a (ENSOTSG00005035229) SERP1 (ENSOTSG00005035228) pcyt1aa (ENSOTSG00005035227) AP2M1 (ENSOTSG00005035211) DVL3 (ENSOTSG00005035208) copb2 (ENSOTSG00005034708) rbp2b (ENSOTSG00005034699) rbp1.1 (ENSOTSG00005034697) clstn2a (ENSOTSG00005034298) zgc:136870 (ENSOTSG00005034297) spsb4a (ENSOTSG00005034296) Rainbow trout MODERN SPECIES 29 prg4a (ENSOMYG00000047885) odr4 (ENSOMYG00000006041) PDC (ENSOMYG00000062022) ENSOMYG00000062673 cox-2 (ENSOMYG00000005747) ENSOMYG00000005301 ENSOMYG00000051963 ENSOMYG00000071686 ENSOMYG00000062081 ENSOMYG00000056163 ENSOMYG00000067137 ENSOMYG00000005183 e2f5 (ENSOMYG00000005177) ENSOMYG00000005143 ENSOMYG00000005000 ENSOMYG00000004921 #22 ENSOMYG00000004891 ENSOMYG00000069296 zgc:153615 (ENSOMYG00000004856) selenot1a (ENSOMYG00000004828) ENSOMYG00000076782 ENSOMYG00000058103 pcyt1aa (ENSOMYG00000004765) ap2m1 (ENSOMYG00000004709) ENSOMYG00000004665 copb2 (ENSOMYG00000004282) rbp1 (ENSOMYG00000068944) clstn2a (ENSOMYG00000003476) spsb4a (ENSOMYG00000003071) slc25a36a (ENSOMYG00000003050) ENSOMYG00000073077 Salmoninae ANCESTRAL SPECIES 76 ENSGT00940000157143.c.b.f ENSGT00390000013003.e.b ENSGT00940000159889.b.b.a.a.b #22 ENSGT00940000157030.c.a.f ENSGT00940000165275.A ENSGT00940000174564.e ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d.d ENSGT00990000209702 ENSGT00940000153655.A.b ENSGT00390000011725.d.z ENSGT00940000161729.m.a.b ENSGT00940000157384.a.d ENSGT00940000159223.d.a ENSGT00950000182903.a.a.d.e ENSGT00940000163467.a.b.b.a.b.e.b ENSGT00900000141083.c.a.a Salmoninae_a ANCESTRAL SPECIES 6 ENSGT00940000159221.k.b ENSGT00930000151041.g.a ENSGT00940000166019.m.b ENSGT00530000063751.a.b.f ENSGT00730000111014.o.a ENSGT00390000012568.k.b ENSGT00940000156236.b.a ENSGT00390000010743.a.b.d ENSGT01030000234606.b.e.a ENSGT00940000154654.a.a.b ENSGT00440000033408.a.b ENSGT00950000183138.b ENSGT01030000234667.a.a.a.b.b.d ENSGT00940000157143.c.b.f ENSGT00390000013003.e.b ENSGT00940000159889.b.b.a.a.b #22 ENSGT00940000157030.c.a.f ENSGT00940000165275.A ENSGT00940000174564.e ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d.d ENSGT00990000209702 ENSGT00940000153655.A.b ENSGT00390000011725.d.z ENSGT00940000161729.m.a.b.a.a ENSGT00940000157384.a.d ENSGT00940000159223.d.a ENSGT00950000182903.a.a.d.e ENSGT00940000163467.a.b.b.a.b.e.b ENSGT00900000141083.c.a.a Salmo ANCESTRAL SPECIES 5 ENSGT00940000157757.g.b.a ENSGT00940000159221.k.b ENSGT00930000151041.g.a ENSGT00940000166019.m.b ENSGT00730000111014.o.a ENSGT00390000012568.k.b ENSGT00940000156236.b.a ENSGT00390000010743.a.b.d ENSGT01030000234606.b.e.a ENSGT00940000154654.a.a.b ENSGT00440000033408.a.b ENSGT00950000183138.a.a.b.v.b.c.a ENSGT01030000234667.a.a.a.b.b.d ENSGT00940000157143.c.b.f ENSGT00390000013003.e.b ENSGT00940000159889.b.b.a.a.b #22 ENSGT00940000157030.c.a.f ENSGT00940000165275.A ENSGT00940000174564.e ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d.d ENSGT00990000209702 ENSGT00940000153655.A.b ENSGT00390000011725.d.z ENSGT00940000161729.m.a.b.a.a ENSGT00940000157384.a.d ENSGT00940000159223.d.a ENSGT00950000182903.a.a.d.e ENSGT00940000163467.a.b.b.a.b.e.b ENSGT00900000141083.c.a.a Atlantic salmon MODERN SPECIES 22 dusp12 (ENSSSAG00000008000) ENSSSAG00000007993 ENSSSAG00000007929 TPR (ENSSSAG00000006573) ENSSSAG00000006470 PDC (ENSSSAG00000110803) ptgs2a (ENSSSAG00000005275) pla2g4aa (ENSSSAG00000003920) ENSSSAG00000103105 ARPC5 (ENSSSAG00000003831) ENSSSAG00000003644 ENSSSAG00000003610 ENSSSAG00000097410 ENSSSAG00000003316 ENSSSAG00000003222 ENSSSAG00000084240 #22 ppm1la (ENSSSAG00000003204) ENSSSAG00000106575 ENSSSAG00000003194 zp3b (ENSSSAG00000116730) IL12p35b (ENSSSAG00000003180) ENSSSAG00000111328 ENSSSAG00000003163 ENSSSAG00000003148 selenot1a (ENSSSAG00000103633) SERP1 (ENSSSAG00000003135) PCY1A (ENSSSAG00000003115) ENSSSAG00000099258 ap2m1 (ENSSSAG00000072141) ENSSSAG00000003034 ENSSSAG00000119258 River trout MODERN SPECIES 24 OLFML2B (ENSSTUG00000037573) ENSSTUG00000037585 dusp12 (ENSSTUG00000037600) ENSSTUG00000037686 TPR (ENSSTUG00000038788) odr4 (ENSSTUG00000042144) PDC (ENSSTUG00000042273) ptgs2a (ENSSTUG00000042310) pla2g4aa (ENSSTUG00000042650) ENSSTUG00000044397 ENSSTUG00000044417 ENSSTUG00000044431 ACKR4 (ENSSTUG00000044448) RC3H1 (ENSSTUG00000044457) ENSSTUG00000044513 ENSSTUG00000044526 #22 ppm1la (ENSSTUG00000044539) arl14 (ENSSTUG00000044551) ENSSTUG00000044564 zp3b (ENSSTUG00000044569) ENSSTUG00000044576 zgc:153615 (ENSSTUG00000044589) ENSSTUG00000044601 ENSSTUG00000044605 ENSSTUG00000044619 selenot1a (ENSSTUG00000044625) SERP1 (ENSSTUG00000044645) pcyt1aa (ENSSTUG00000044654) ap2m1a (ENSSTUG00000044679) dvl3a (ENSSTUG00000044755) ENSSTUG00000045094 Oncorhynchus ANCESTRAL SPECIES 15 ENSGT00930000151041.g.a ENSGT00940000166019.m.b ENSGT00530000063751.a.b.f ENSGT00730000111014.o.a ENSGT00390000012568.k.b ENSGT00940000156236.b.a ENSGT00390000010743.a.b.d ENSGT01030000234606.b.e.a ENSGT00940000154654.a.a.b ENSGT00440000033408.a.b ENSGT00950000183138.b ENSGT01000000221172 ENSGT01030000234667.a.a.a.b.b.d ENSGT00940000157143.c.b.f ENSGT00390000013003.e.b ENSGT00940000159889.b.b.a.a.b #22 ENSGT00940000157030.c.a.f ENSGT00940000165275.A ENSGT00940000174564.e ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d.d ENSGT00990000209702 ENSGT00940000153655.A.b ENSGT00390000011725.d.z ENSGT00940000161729.m.a.b.a.a ENSGT00940000157384.a.d ENSGT00940000159223.d.a ENSGT00950000182903.a.a.d.e ENSGT00940000163467.a.b.b.a.b.e.b ENSGT00900000141083.c.a.a Oncorhynchus_a ANCESTRAL SPECIES 22 ENSGT00930000151041.g.a ENSGT00940000166019.m.b ENSGT00530000063751.a.b.f ENSGT00730000111014.o.a ENSGT01000000220425 ENSGT00940000156236.b.a ENSGT00390000010743.a.b.d ENSGT01030000234606.b.e.a ENSGT00940000154654.a.a.b ENSGT00440000033408.a.b ENSGT00950000183138.b ENSGT01000000221172 ENSGT01030000234667.a.a.a.b.b.d ENSGT00940000157143.c.b.f ENSGT00390000013003.e.b ENSGT00940000159889.b.b.a.a.b #22 ENSGT00940000157030.c.a.f ENSGT00940000165275.A ENSGT00940000174564.e ENSGT01030000234567.B.a.b.a.b.b ENSGT00390000016906.a ENSGT00390000011127.d.d ENSGT00990000209702 ENSGT00940000153655.A.b ENSGT00390000011725.d.z ENSGT00940000161729.m.a.b.a.a ENSGT00940000157384.a.d ENSGT00940000159223.d.a ENSGT00950000182903.a.a.d.e ENSGT00940000163467.a.b.b.a.b.e.b ENSGT00900000141083.c.a.a Chinook salmon MODERN SPECIES 20 dusp12 (ENSOTSG00005020082) ENSOTSG00005020086 prg4a (ENSOTSG00005021986) TPR (ENSOTSG00005021998) ENSOTSG00005022169 PDC (ENSOTSG00005022171) ptgs2a (ENSOTSG00005022172) pla2g4aa (ENSOTSG00005022192) ENSOTSG00005022439 ENSOTSG00005022441 ENSOTSG00005022444 ENSOTSG00005022446 ACKR4 (ENSOTSG00005022447) RC3H1 (ENSOTSG00005022449) ENSOTSG00005022452 ENSOTSG00005022454 #22 kcnn1a (ENSOTSG00005022461) ENSOTSG00005022597 zgc:154006 (ENSOTSG00005022598) nr2f6a (ENSOTSG00005022599) plvapa (ENSOTSG00005022600) ANO8 (ENSOTSG00005022601) dda1 (ENSOTSG00005023399) mrpl34 (ENSOTSG00005023401) ABHD8 (ENSOTSG00005023402) ENSOTSG00005023409 st3gal3b (ENSOTSG00005023461) ENSOTSG00005024576 ptger4c (ENSOTSG00005024577) pif1 (ENSOTSG00005024579) ENSOTSG00005024619 Coho salmon MODERN SPECIES 19 OLFML2B (ENSOKIG00005049969) ENSOKIG00005049977 dusp12 (ENSOKIG00005049983) ENSOKIG00005050015 TPR (ENSOKIG00005050175) ENSOKIG00005050241 PDC (ENSOKIG00005050248) ptgs2a (ENSOKIG00005050251) pla2g4aa (ENSOKIG00005050278) ENSOKIG00005050357 ENSOKIG00005050362 ENSOKIG00005050367 ACKR4 (ENSOKIG00005050369) RC3H1 (ENSOKIG00005050375) ENSOKIG00005050390 ENSOKIG00005050393 #22 ppm1la (ENSOKIG00005050395) arl14 (ENSOKIG00005050400) ENSOKIG00005050405 zp3b (ENSOKIG00005050407) ENSOKIG00005050411 zgc:153615 (ENSOKIG00005050423) ENSOKIG00005050428 ENSOKIG00005050433 selenot1a (ENSOKIG00005050438) SERP1 (ENSOKIG00005050444) pcyt1aa (ENSOKIG00005050446) ap2m1a (ENSOKIG00005050452) dvl3a (ENSOKIG00005050468) ENSOKIG00005050484 copb2 (ENSOKIG00005050504) Rainbow trout MODERN SPECIES 20 dusp12 (ENSOMYG00000045149) ENSOMYG00000045209 prg4a (ENSOMYG00000045423) TPR (ENSOMYG00000045515) odr4 (ENSOMYG00000045757) PDC (ENSOMYG00000070852) ENSOMYG00000065892 ptgs2a (ENSOMYG00000045785) pla2g4aa (ENSOMYG00000045883) ENSOMYG00000046062 ENSOMYG00000060336 ENSOMYG00000046074 ENSOMYG00000057317 ENSOMYG00000046090 ENSOMYG00000046066 ENSOMYG00000046106 #22 ENSOMYG00000069011 ppm1la (ENSOMYG00000004863) ENSOMYG00000046121 ENSOMYG00000046124 zp3b (ENSOMYG00000046127) ENSOMYG00000046134 ENSOMYG00000046154 ENSOMYG00000046167 selenot1a (ENSOMYG00000046175) SERP1 (ENSOMYG00000048273) pcyt1aa (ENSOMYG00000046197) ENSOMYG00000046211 dvl3a (ENSOMYG00000046247) ENSOMYG00000046266 copb2 (ENSOMYG00000046308) Huchen MODERN SPECIES 1999 ENSHHUG00000014509 dusp12 (ENSHHUG00000014511) ENSHHUG00000014512 RC3H1 (ENSHHUG00000014516) ENSHHUG00000014523 ENSHHUG00000014525 #22 ppm1la (ENSHHUG00000014526) arl14 (ENSHHUG00000014527) ENSHHUG00000014529 zp3b (ENSHHUG00000014531) ENSHHUG00000014532 zgc:153615 (ENSHHUG00000014610) Protacanthopterygii ANCESTRAL SPECIES 47 ENSGT01030000235480 ENSGT00940000157634.c ENSGT01030000234559.a.b ENSGT00940000154296.b.b ENSGT00940000154290.a.f ENSGT01050000244838.H.d.d ENSGT01050000244898.a.a.b #33 ENSGT00940000154587.a.a ENSGT00940000155505.a.b ENSGT00940000163316 ENSGT00390000003860.gb ENSGT00940000160024.d ENSGT00940000159858 ENSGT00940000154044.a.a.q.a ENSGT01090000260052.a.b.j ENSGT00940000159889.b.b.a.b #22 ENSGT01030000234837 ENSGT00940000155136 ENSGT00940000157668 ENSGT00950000182916.a.b.a.a.a.a ENSGT00940000165098 ENSGT00390000012765 #31 ENSGT00940000159943 ENSGT00940000155026.d ENSGT00390000013973.A.a.c.b.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000154611.bd ENSGT00940000163422 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 785 ENSGT00940000159858.b ENSGT00940000154044.a.a.q.a.g.b ENSGT01090000260052.a.b.j.h ENSGT00940000159889.b.b.a.b.a #22 ENSGT01030000234837.a ENSGT00940000155136.kb.b ENSGT00940000157668.p ENSGT00950000182916.a.b.a.a.a.a.g.a ENSGT00390000012765.c #31 ENSGT00940000159943.h Salmoninae_a ANCESTRAL SPECIES 1 ENSGT00940000154296.b.b.a ENSGT00940000154290.a.f.d ENSGT01050000244838.H.d.d.d ENSGT01050000244898.a.a.b.b #33 ENSGT00940000154587.a.a ENSGT00940000155505.a.b.f ENSGT00940000163316.s ENSGT00390000003860.gb.h ENSGT00960000186850.b.b.b ENSGT00950000182879.a.a ENSGT00940000154573.eb ENSGT00940000160024.d.a ENSGT00940000159858.b ENSGT00940000154044.a.a.q.a.g.b ENSGT01090000260052.a.b.j.h ENSGT00940000159889.b.b.a.b.a #22 ENSGT01030000234837.a ENSGT00940000155136.kb.b ENSGT00940000157668.p ENSGT00950000182916.a.b.a.a.a.a.g.a ENSGT00390000012765.c #31 ENSGT00940000159943.h ENSGT00390000013973.A.a.c.b.b ENSGT01100000263556.b.a.a ENSGT00390000005554 ENSGT00940000159902 ENSGT00940000159228.a.a.b ENSGT00940000154611.bd ENSGT00940000163422.a ENSGT00940000154611.ad.a.c.b ENSGT00940000165071.c Salmo ANCESTRAL SPECIES 9 ENSGT00940000154296.b.b.a ENSGT00940000154290.a.f.d ENSGT01050000244838.H.d.d.d ENSGT01050000244898.a.a.b.b #33 ENSGT00940000154587.a.a ENSGT00940000155505.a.b.f ENSGT00940000163316.s ENSGT00390000003860.gb.h ENSGT00960000186850.b.b.b ENSGT00950000182879.a.a ENSGT00940000154573.eb ENSGT00940000160024.d.a ENSGT00940000159858.b ENSGT00940000154044.a.a.q.a.g.b ENSGT01090000260052.a.b.j.h ENSGT00940000159889.b.b.a.b.a #22 ENSGT01030000234837.a ENSGT00940000155136.kb.b ENSGT00940000157668.p ENSGT00950000182916.a.b.a.a.a.a.g.a ENSGT00390000012765.c #31 ENSGT00940000159943.h ENSGT00390000013973.A.a.c.b.b ENSGT01100000263556.b.a.a ENSGT00390000005554 ENSGT00940000159902 ENSGT00940000159228.a.a.b ENSGT00940000154611.bd ENSGT00940000163422.a ENSGT00940000154611.ad.a.c.b ENSGT00940000165071.c Atlantic salmon MODERN SPECIES 7 ENSSSAG00000006944 ENSSSAG00000006790 ptgfr (ENSSSAG00000006785) btf3l4 (ENSSSAG00000006729) ENSSSAG00000006289 elovl1b (ENSSSAG00000006209) mknk1 (ENSSSAG00000006104) ENSSSAG00000092908 ENSSSAG00000044838 QCR6 (ENSSSAG00000044798) ENSSSAG00000044739 ENSSSAG00000044727 ENSSSAG00000044685 ENSSSAG00000044315 ENSSSAG00000096789 tal1 (ENSSSAG00000044296) #22 ENSSSAG00000044291 ENSSSAG00000044276 ENSSSAG00000088981 PATJ (ENSSSAG00000043932) tm2d1 (ENSSSAG00000121028) ENSSSAG00000087807 nfia (ENSSSAG00000096019) atpaf1 (ENSSSAG00000096927) #31 ENSSSAG00000043104 axdnd1 (ENSSSAG00000043025) ENSSSAG00000043004 fam163ab (ENSSSAG00000095216) ENSSSAG00000093861 ENSSSAG00000037596 ENSSSAG00000034928 River trout MODERN SPECIES 8 ptgfr (ENSSTUG00000039761) btf3l4 (ENSSTUG00000039763) ENSSTUG00000039790 elovl1b (ENSSTUG00000039827) mob3c (ENSSTUG00000039847) #33 mknk1 (ENSSTUG00000039874) dmbx1b (ENSSTUG00000039987) ENSSTUG00000040004 ENSSTUG00000040058 ENSSTUG00000040083 ENSSTUG00000040102 ENSSTUG00000040115 ENSSTUG00000040130 FYCO1 (ENSSTUG00000040197) XCR1 (ENSSTUG00000040311) tal1 (ENSSTUG00000040318) #22 ENSSTUG00000040325 PATJ (ENSSTUG00000040337) ENSSTUG00000040445 tm2d1 (ENSSTUG00000040452) nfia (ENSSTUG00000040478) atpaf1 (ENSSTUG00000040488) #31 ENSSTUG00000040526 ENSSTUG00000040570 ENSSTUG00000040578 axdnd1 (ENSSTUG00000040619) ENSSTUG00000040796 fam163ab (ENSSTUG00000040831) ENSSTUG00000040956 GPR52 (ENSSTUG00000043818) ENSSTUG00000043833 Oncorhynchus ANCESTRAL SPECIES 2 ENSGT00940000154296.b.b.a ENSGT00940000154290.a.f.d ENSGT01050000244838.H.d.d.d ENSGT01050000244898.a.a.b.b #33 ENSGT00940000154587.a.a ENSGT00940000155505.a.b.f ENSGT00940000163316.s ENSGT00390000003860.gb.h ENSGT00960000186850.b.b.b ENSGT00950000182879.a.a ENSGT00940000154573.eb ENSGT00940000160024.d.a ENSGT00940000159858.b ENSGT00940000154044.a.a.q.a.g.b ENSGT01090000260052.a.b.j.h ENSGT00940000159889.b.b.a.b.a #22 ENSGT01030000234837.a ENSGT00940000155136.kb.b ENSGT00940000157668.p ENSGT00950000182916.a.b.a.a.a.a.g.a ENSGT00390000012765.c #31 ENSGT00940000159943.h ENSGT00390000013973.A.a.c.b.b ENSGT01100000263556.b.a.a ENSGT00390000005554 ENSGT00940000159902 ENSGT00940000159228.a.a.b ENSGT00940000163422.a ENSGT00940000154611.bd ENSGT00940000165071.c ENSGT00940000160040.B.b.b Oncorhynchus_a ANCESTRAL SPECIES 1 ENSGT00940000154296.b.b.a ENSGT00940000154290.a.f.d ENSGT01050000244838.H.d.d.d ENSGT01050000244898.a.a.b.b #33 ENSGT00940000154587.a.a ENSGT00940000155505.a.b.f ENSGT00940000163316.s ENSGT00390000003860.gb.h ENSGT00960000186850.b.b.b ENSGT00950000182879.a.a ENSGT00940000154573.eb ENSGT00940000160024.d.a ENSGT00940000159858.b ENSGT00940000154044.a.a.q.a.g.b ENSGT01090000260052.a.b.j.h ENSGT00940000159889.b.b.a.b.a #22 ENSGT01030000234837.a ENSGT00940000155136.kb.b ENSGT00950000182916.a.b.a.a.a.a.g.a ENSGT00390000012765.c #31 ENSGT00940000159943.h ENSGT00390000013973.A.a.c.b.b ENSGT01100000263556.b.a.a ENSGT00390000005554 ENSGT00940000159902 ENSGT00940000159228.a.a.b ENSGT00940000163422.a ENSGT00940000154611.bd ENSGT00940000165071.c ENSGT00940000160040.B.b.b ENSGT00940000160040.B.b.a.b Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 30 st6galnac5b (ENSOTSG00005032804) ptgfr (ENSOTSG00005032805) btf3l4 (ENSOTSG00005032806) ENSOTSG00005032807 elovl1b (ENSOTSG00005032808) mob3c (ENSOTSG00005032810) #33 mknk1 (ENSOTSG00005032811) DMBX1 (ENSOTSG00005032850) ENSOTSG00005032852 ENSOTSG00005032853 ENSOTSG00005032854 ENSOTSG00005032856 ENSOTSG00005032857 FYCO1 (ENSOTSG00005032863) XCR1 (ENSOTSG00005032868) tal1 (ENSOTSG00005032870) #22 ENSOTSG00005032871 ENSOTSG00005032876 nfia (ENSOTSG00005032881) atpaf1 (ENSOTSG00005032885) #31 ENSOTSG00005032887 ENSOTSG00005032889 ENSOTSG00005032890 axdnd1 (ENSOTSG00005032891) ENSOTSG00005032893 fam163ab (ENSOTSG00005032895) ENSOTSG00005032902 GPR52 (ENSOTSG00005033488) fam174c (ENSOTSG00005033490) PTBP1 (ENSOTSG00005033493) ENSOTSG00005034480 Chinook salmon MODERN SPECIES 2929 st6galnac5b (ENSOTSG00005029904) ptgfr (ENSOTSG00005029905) btf3l4 (ENSOTSG00005029908) ENSOTSG00005029909 elovl1b (ENSOTSG00005029910) mob3c (ENSOTSG00005029913) #33 mknk1 (ENSOTSG00005029916) DMBX1 (ENSOTSG00005029921) ENSOTSG00005029922 ENSOTSG00005029924 ENSOTSG00005029925 ENSOTSG00005029926 ENSOTSG00005029927 FYCO1 (ENSOTSG00005029929) XCR1 (ENSOTSG00005029987) tal1 (ENSOTSG00005029988) #22 ENSOTSG00005029989 Coho salmon MODERN SPECIES 24 btf3l4 (ENSOKIG00005002416) ENSOKIG00005002439 elovl1b (ENSOKIG00005002455) mob3c (ENSOKIG00005002465) #33 mknk1 (ENSOKIG00005002521) dmbx1b (ENSOKIG00005002662) ENSOKIG00005002674 ENSOKIG00005002693 ENSOKIG00005002710 ENSOKIG00005002721 ENSOKIG00005002728 ENSOKIG00005002766 FYCO1 (ENSOKIG00005002944) XCR1 (ENSOKIG00005002959) pdzk1ip1 (ENSOKIG00005002961) #23 tal1 (ENSOKIG00005002969) #22 ENSOKIG00005002987 ENSOKIG00005003021 ENSOKIG00005003031 nfia (ENSOKIG00005003046) atpaf1 (ENSOKIG00005003064) #31 ENSOKIG00005003081 ENSOKIG00005003100 ENSOKIG00005003107 axdnd1 (ENSOKIG00005003112) ENSOKIG00005003121 fam163ab (ENSOKIG00005003131) ENSOKIG00005003236 GPR52 (ENSOKIG00005003889) ENSOKIG00005003911 ENSOKIG00005004094 Rainbow trout MODERN SPECIES mob3c (ENSOMYG00000003719) #33 mknk1 (ENSOMYG00000003938) ENSOMYG00000055131 ENSOMYG00000063922 ENSOMYG00000060298 ENSOMYG00000003997 ENSOMYG00000004051 ENSOMYG00000004065 ENSOMYG00000004113 ENSOMYG00000004120 ENSOMYG00000004261 ENSOMYG00000076441 ENSOMYG00000004435 ENSOMYG00000060476 ENSOMYG00000004503 tal1 (ENSOMYG00000004513) #22 ENSOMYG00000071077 PATJ (ENSOMYG00000004583) ENSOMYG00000064297 tm2d1 (ENSOMYG00000004606) nfia (ENSOMYG00000004657) ENSOMYG00000053425 atpaf1 (ENSOMYG00000004787) #31 ENSOMYG00000075308 ENSOMYG00000074160 ENSOMYG00000052708 ENSOMYG00000004873 axdnd1 (ENSOMYG00000004924) ENSOMYG00000066248 ENSOMYG00000005017 FAM163A (ENSOMYG00000005029) Huchen MODERN SPECIES 3373 ENSHHUG00000025013 FYCO1 (ENSHHUG00000024997) XCR1 (ENSHHUG00000024980) ENSHHUG00000024976 tal1 (ENSHHUG00000024970) #22 ENSHHUG00000024960 ENSHHUG00000024952 Salmoninae ANCESTRAL SPECIES 41 ENSGT01030000235480 ENSGT00940000157634.c.c ENSGT00940000154296.b.b.b ENSGT00940000154290.a.f.c ENSGT01050000244838.H.d.d.c ENSGT01050000244898.a.a.b.a #33 ENSGT00990000210619 ENSGT00940000155505.a.b.e ENSGT00940000163316.t ENSGT00960000186850.b.b.a ENSGT00940000160024.d.b ENSGT00940000164218 ENSGT00940000159858.a ENSGT00940000154044.a.a.q.a.g.a ENSGT01090000260052.a.b.j.g ENSGT00940000159889.b.b.a.b.b #22 ENSGT01030000234837.b ENSGT00940000155136.kb.a ENSGT00940000157668.o ENSGT00950000182916.a.b.a.a.a.a.g.b ENSGT00940000165098 ENSGT00390000012765.d #31 ENSGT00940000159943.g ENSGT00940000155026.d ENSGT01030000234614.B.b ENSGT00940000159228.a.a.a ENSGT00940000163422.b ENSGT00940000154611.ad.a.c.a ENSGT00940000165071.d ENSGT00940000160040.B.b ENSGT00530000064649.b Huchen MODERN SPECIES 540 btf3l4 (ENSHHUG00000048495) ENSHHUG00000048465 elovl1b (ENSHHUG00000048440) mob3c (ENSHHUG00000048438) #33 ENSHHUG00000048433 dmbx1b (ENSHHUG00000048416) ENSHHUG00000048408 ENSHHUG00000048386 ENSHHUG00000048381 ENSHHUG00000048360 ENSHHUG00000048297 FYCO1 (ENSHHUG00000048295) ENSHHUG00000048294 XCR1 (ENSHHUG00000048293) tal1 (ENSHHUG00000048292) #22 ENSHHUG00000048291 ENSHHUG00000048289 ENSHHUG00000048288 ENSHHUG00000048215 tm2d1 (ENSHHUG00000048210) Salmoninae_a ANCESTRAL SPECIES 22 ENSGT00940000157634.c.c ENSGT00940000154296.b.b.b ENSGT00940000154290.a.f.c ENSGT01050000244838.H.d.d.c ENSGT01050000244898.a.a.b.a #33 ENSGT00990000210619 ENSGT00940000155505.a.b.e ENSGT00940000163316.t ENSGT00390000003860.gb.g ENSGT00960000186850.b.b.a ENSGT00940000160024.d.b ENSGT00940000164218 ENSGT00940000159858.a ENSGT00940000154044.a.a.q.a.g.a ENSGT01090000260052.a.b.j.g ENSGT00940000159889.b.b.a.b.b #22 ENSGT01030000234837.b ENSGT00940000155136.kb.a ENSGT00940000157668.o ENSGT00950000182916.a.b.a.a.a.a.g.b ENSGT00940000165098 ENSGT00390000012765.d #31 ENSGT00940000159943.g ENSGT00940000155026.d ENSGT01030000234614.B.b ENSGT00940000159228.a.a.a ENSGT00940000163422.b ENSGT00940000154611.ad.a.c.a ENSGT00940000165071.d ENSGT00940000160040.B.b ENSGT00530000064649.b Salmo ANCESTRAL SPECIES 14 ENSGT01030000235480 ENSGT00940000157634.c.c ENSGT00940000154296.b.b.b ENSGT00940000154290.a.f.c ENSGT01050000244838.H.d.d.c ENSGT01050000244898.a.a.b.a #33 ENSGT00990000210619 ENSGT00940000155505.a.b.e ENSGT00940000163316.t ENSGT00390000003860.gb.g ENSGT00940000160024.d.b ENSGT00940000164218 ENSGT00940000159858.a ENSGT00940000154044.a.a.q.a.g.a ENSGT01090000260052.a.b.j.g ENSGT00940000159889.b.b.a.b.b #22 ENSGT01030000234837.b ENSGT00940000155136.kb.a ENSGT00940000157668.o ENSGT00950000182916.a.b.a.a.a.a.g.b ENSGT00940000165098 ENSGT00390000012765.d #31 ENSGT00940000159943.g ENSGT00940000155026.d ENSGT01030000234614.B.b ENSGT00940000159228.a.a.a ENSGT00940000154611.ad.a.c.a ENSGT00940000163422.b ENSGT00940000165071.d ENSGT00940000160040.B.b ENSGT00530000064649.b Atlantic salmon MODERN SPECIES 1 btf3l4 (ENSSSAG00000075256) ENSSSAG00000075268 elovl1b (ENSSSAG00000075310) mob3c (ENSSSAG00000006189) #33 ENSSSAG00000107967 ENSSSAG00000109386 ENSSSAG00000075333 ENSSSAG00000075343 QCR6 (ENSSSAG00000075360) ENSSSAG00000075376 ENSSSAG00000075383 ENSSSAG00000075403 ENSSSAG00000075646 ENSSSAG00000075658 ENSSSAG00000107070 tal1 (ENSSSAG00000075661) #22 PATJ (ENSSSAG00000075664) tm2d1 (ENSSSAG00000108257) nfia (ENSSSAG00000085371) frem1b (ENSSSAG00000075725) atpaf1 (ENSSSAG00000075779) #31 nrd1b (ENSSSAG00000075825) nphs2 (ENSSSAG00000081931) fam163ab (ENSSSAG00000077645) ENSSSAG00000038528 ENSSSAG00000088960 ENSSSAG00000040467 ENSSSAG00000086245 ENSSSAG00000040879 ENSSSAG00000040896 ptbp1b (ENSSSAG00000041000) River trout MODERN SPECIES 14 st6galnac5b (ENSSTUG00000008519) ENSSTUG00000008530 btf3l4 (ENSSTUG00000008547) ENSSTUG00000008571 elovl1b (ENSSTUG00000008612) mob3c (ENSSTUG00000008625) #33 ENSSTUG00000008632 DMBX1 (ENSSTUG00000008640) ENSSTUG00000008654 ENSSTUG00000008723 ENSSTUG00000008748 ENSSTUG00000008760 GHRHR (ENSSTUG00000008775) FYCO1 (ENSSTUG00000008811) XCR1 (ENSSTUG00000009001) tal1 (ENSSTUG00000009006) #22 ENSSTUG00000009018 PATJ (ENSSTUG00000009038) tm2d1 (ENSSTUG00000009125) nfia (ENSSTUG00000009175) frem1b (ENSSTUG00000009321) atpaf1 (ENSSTUG00000009769) #31 ENSSTUG00000009788 nrd1b (ENSSTUG00000009867) nphs2 (ENSSTUG00000011858) ENSSTUG00000011866 fam163ab (ENSSTUG00000011899) RABGAP1L (ENSSTUG00000011995) ENSSTUG00000014766 ENSSTUG00000015634 ENSSTUG00000015638 Oncorhynchus ANCESTRAL SPECIES 8 ENSGT00940000157634.c.c ENSGT00940000154296.b.b.b ENSGT00940000154290.a.f.c ENSGT01050000244838.H.d.d.c ENSGT01050000244898.a.a.b.a #33 ENSGT00990000210619 ENSGT00940000155505.a.b.e ENSGT00940000163316.t ENSGT00390000003860.gb.g ENSGT00960000186850.b.b.a ENSGT00940000160024.d.b ENSGT00940000164218 ENSGT00940000159858.a ENSGT00940000154044.a.a.q.a.g.a ENSGT01090000260052.a.b.j.g ENSGT00940000159889.b.b.a.b.b #22 ENSGT01030000234837.b ENSGT00940000155136.kb.a ENSGT00940000157668.o ENSGT00950000182916.a.b.a.a.a.a.g.b ENSGT00940000165098 ENSGT00390000012765.d #31 ENSGT00940000159943.g ENSGT00940000155026.d ENSGT01030000234614.B.b ENSGT00940000159228.a.a.a ENSGT00940000163422.b ENSGT00940000154611.ad.a.c.a ENSGT00940000165071.d ENSGT00940000160040.B.b.a.a ENSGT00530000064649.b Oncorhynchus_a ANCESTRAL SPECIES 14 ENSGT00940000154296.b.b.b ENSGT00940000154290.a.f.c ENSGT01050000244838.H.d.d.c ENSGT01050000244898.a.a.b.a #33 ENSGT00990000210619 ENSGT00940000155505.a.b.e ENSGT00940000163316.t ENSGT00390000003860.gb.g ENSGT00960000186850.b.b.a ENSGT00940000160024.d.b ENSGT00940000167711.a.b ENSGT00940000164218 ENSGT00940000159858.a ENSGT00940000154044.a.a.q.a.g.a ENSGT01090000260052.a.b.j.g ENSGT00940000159889.b.b.a.b.b #22 ENSGT01030000234837.b ENSGT00940000155136.kb.a ENSGT00940000157668.o ENSGT00950000182916.a.b.a.a.a.a.g.b ENSGT00940000165098 ENSGT00390000012765.d #31 ENSGT00940000159943.g ENSGT00940000155026.d ENSGT01030000234614.B.b ENSGT00940000159228.a.a.a ENSGT00940000163422.b ENSGT00940000154611.ad.a.c.a ENSGT00940000165071.d ENSGT00940000160040.B.b.a.a ENSGT00530000064649.b Chinook salmon MODERN SPECIES 29 ENSOTSG00005047568 SLC44A5 (ENSOTSG00005047580) st6galnac5b (ENSOTSG00005047642) btf3l4 (ENSOTSG00005047643) ENSOTSG00005047644 elovl1b (ENSOTSG00005047645) mob3c (ENSOTSG00005047646) #33 DMBX1 (ENSOTSG00005047648) ENSOTSG00005047649 uqcrh (ENSOTSG00005008630) ENSOTSG00005008631 ENSOTSG00005008632 ENSOTSG00005008633 FYCO1 (ENSOTSG00005008760) XCR1 (ENSOTSG00005008764) tal1 (ENSOTSG00005008765) #22 ENSOTSG00005008767 PATJ (ENSOTSG00005008768) tm2d1 (ENSOTSG00005008769) nfia (ENSOTSG00005008780) frem1b (ENSOTSG00005008828) atpaf1 (ENSOTSG00005008829) #31 ENSOTSG00005008831 nrd1b (ENSOTSG00005008839) nphs2 (ENSOTSG00005013255) fam163ab (ENSOTSG00005013256) RABGAP1L (ENSOTSG00005013267) ENSOTSG00005019962 ENSOTSG00005021717 fam174c (ENSOTSG00005021718) ptbp1b (ENSOTSG00005021720) Coho salmon MODERN SPECIES 4 ENSOKIG00005011551 ENSOKIG00005011526 ENSOKIG00005010042 st6galnac5b (ENSOKIG00005009942) btf3l4 (ENSOKIG00005009916) ENSOKIG00005009899 elovl1b (ENSOKIG00005009886) mob3c (ENSOKIG00005009874) #33 ENSOKIG00005009867 DMBX1 (ENSOKIG00005009864) ENSOKIG00005009771 ENSOKIG00005009754 ENSOKIG00005009743 FYCO1 (ENSOKIG00005009620) ENSOKIG00005009592 tal1 (ENSOKIG00005009587) #22 ENSOKIG00005009581 PATJ (ENSOKIG00005009159) tm2d1 (ENSOKIG00005009114) nfia (ENSOKIG00005008673) frem1b (ENSOKIG00005008055) atpaf1 (ENSOKIG00005007980) #31 ENSOKIG00005007957 nrd1b (ENSOKIG00005004920) nphs2 (ENSOKIG00005004747) fam163ab (ENSOKIG00005004740) GPR52 (ENSOKIG00005004726) ENSOKIG00005004230 ENSOKIG00005003884 ENSOKIG00005003852 ENSOKIG00005017493 Rainbow trout MODERN SPECIES 26 st6galnac5b (ENSOMYG00000021256) btf3l4 (ENSOMYG00000021272) ENSOMYG00000072239 ENSOMYG00000021284 elovl1b (ENSOMYG00000021298) mob3c (ENSOMYG00000021309) #33 ENSOMYG00000021316 ENSOMYG00000068498 ENSOMYG00000021326 ENSOMYG00000021400 ENSOMYG00000021435 ENSOMYG00000050123 ENSOMYG00000021508 ENSOMYG00000021645 ENSOMYG00000021666 tal1 (ENSOMYG00000021673) #22 ENSOMYG00000051891 PATJ (ENSOMYG00000021761) tm2d1 (ENSOMYG00000021950) ENSOMYG00000021959 nfia (ENSOMYG00000022032) ENSOMYG00000077049 frem1b (ENSOMYG00000022312) atpaf1 (ENSOMYG00000022632) #31 ENSOMYG00000059299 nrd1b (ENSOMYG00000023122) nphs2 (ENSOMYG00000025210) fam163ab (ENSOMYG00000025221) ENSOMYG00000025555 ENSOMYG00000067194 ENSOMYG00000026682 Northern pike MODERN SPECIES 7 ccdc124 (ENSELUG00000024433) slc5a5 (ENSELUG00000024482) ENSELUG00000024624 B3GNT3 (ENSELUG00000002711) ENSELUG00000002717 ndufa7 (ENSELUG00000002735) ENSELUG00000002728 ENSELUG00000031031 uqcrh (ENSELUG00000002741) ENSELUG00000032334 ENSELUG00000002760 GHRHR (ENSELUG00000000074) ENSELUG00000002811 FYCO1 (ENSELUG00000002841) XCR1 (ENSELUG00000001339) tal1 (ENSELUG00000002865) #22 ENSELUG00000029987 PATJ (ENSELUG00000002898) tm2d1 (ENSELUG00000001039) nfia (ENSELUG00000002944) ENSELUG00000025403 frem1b (ENSELUG00000002969) atpaf1 (ENSELUG00000002985) #31 ENSELUG00000002993 nrd1b (ENSELUG00000003025) ENSELUG00000028004 ENSELUG00000003041 axdnd1 (ENSELUG00000003065) nphs2 (ENSELUG00000003072) ENSELUG00000003097 fam163ab (ENSELUG00000003114) Protacanthopterygii ANCESTRAL SPECIES ENSGT00940000159889.b.b.b #22 Northern pike MODERN SPECIES 2 thap4 (ENSELUG00000030482) thap4 (ENSELUG00000022321) bokb (ENSELUG00000022269) ptgs2a (ENSELUG00000022225) pla2g4aa (ENSELUG00000022196) ENSELUG00000022106 ENSELUG00000026744 ENSELUG00000030671 ENSELUG00000022049 ENSELUG00000022013 ACKR4 (ENSELUG00000021952) e2f5 (ENSELUG00000021935) ENSELUG00000021839 RC3H1 (ENSELUG00000021770) ENSELUG00000021721 ENSELUG00000021713 #22 otol1a (ENSELUG00000021696) ENSELUG00000021689 ppm1la (ENSELUG00000021679) ENSELUG00000021657 zp3b (ENSELUG00000021647) ENSELUG00000021639 zgc:153615 (ENSELUG00000021618) ENSELUG00000021606 selenot1a (ENSELUG00000021595) zgc:92744 (ENSELUG00000021578) pcyt1aa (ENSELUG00000021543) ap2m1a (ENSELUG00000021515) dvl3a (ENSELUG00000021493) copb2 (ENSELUG00000021442) rbp2b (ENSELUG00000021410) Otomorpha ANCESTRAL SPECIES 75 ENSGT00940000157316.e.a ENSGT00940000166298 ENSGT00940000165058.b ENSGT00940000164081.a ENSGT00510000046975.a ENSGT00940000154842.a.b.f ENSGT00940000164519.c.a ENSGT00940000155899.e.b ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00390000013003.e.a ENSGT00940000157639 ENSGT00900000141021.a ENSGT00940000159889.b.b #22 ENSGT01030000234837 ENSGT00940000155136 ENSGT00940000157668 ENSGT00950000182916.a.b.a.a.a.a ENSGT00940000165098 ENSGT00390000012765 #31 ENSGT00940000159943 ENSGT00940000155026.d ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.b.a.b ENSGT00940000159228.a ENSGT00940000163422 ENSGT00940000154611.ad.a Clupeiformes ANCESTRAL SPECIES 13 ENSGT00940000155117.f.b ENSGT00390000006200 ENSGT00940000158520.e.a ENSGT00940000157316.e.a ENSGT00940000166298 ENSGT00940000165058.b ENSGT00940000164081.a ENSGT00510000046975.a ENSGT00940000154842.a.b.f ENSGT00940000164519.c.a ENSGT00940000155899.e.b ENSGT00940000158820 ENSGT00940000164809 ENSGT00940000157143.c.b ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT00940000157030.c.a ENSGT01030000234837 ENSGT00940000155136 ENSGT00940000157668 ENSGT00950000182916.a.b.a.a.a.a ENSGT00940000165098 ENSGT00390000012765 #31 ENSGT00940000159943 ENSGT00940000155026.d ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.b.b ENSGT00940000163422 ENSGT00940000154611.ad.a Denticle herring DUPLICATION Denticle herring MODERN SPECIES 4 APC2 (ENSDCDG00000035101) diras1b (ENSDCDG00000035103) GNG7 (ENSDCDG00000035104) gadd45ba (ENSDCDG00000035106) ENSDCDG00000035109 ENSDCDG00000035113 MAP1S (ENSDCDG00000035116) ENSDCDG00000035119 zbtb37 (ENSDCDG00000035121) serpinc1 (ENSDCDG00000035131) RC3H1 (ENSDCDG00000035153) stil (ENSDCDG00000035156) #21 ENSDCDG00000035160 stx6 (ENSDCDG00000018795) ier5 (ENSDCDG00000018799) tal1 (ENSDCDG00000018802) #22 ENSDCDG00000018806 pdzk1ip1 (ENSDCDG00000018810) #23 PATJ (ENSDCDG00000018847) tm2d1 (ENSDCDG00000018877) nfia (ENSDCDG00000018888) ENSDCDG00000018953 atpaf1 (ENSDCDG00000019007) #31 ENSDCDG00000019039 nrd1b (ENSDCDG00000019301) nphs2 (ENSDCDG00000026506) ENSDCDG00000026507 FAM163A (ENSDCDG00000026509) RABGAP1L (ENSDCDG00000026560) GPR52 (ENSDCDG00000027460) si:ch211-264f5.2 (ENSDCDG00000027463) Denticle herring MODERN SPECIES 14 ro60 (ENSDCDG00000016263) rgs13 (ENSDCDG00000016287) RGS1 (ENSDCDG00000016289) rgs18 (ENSDCDG00000016291) ENSDCDG00000016295 rgs5b (ENSDCDG00000016298) ENSDCDG00000016299 DDR2 (ENSDCDG00000016305) xpr1b (ENSDCDG00000016328) DBT (ENSDCDG00000016356) ENSDCDG00000016365 extl2 (ENSDCDG00000016386) zgc:110366 (ENSDCDG00000016390) RC3H1 (ENSDCDG00000016400) ENSDCDG00000016409 ENSDCDG00000016411 #22 ppm1la (ENSDCDG00000016413) ENSDCDG00000016414 ENSDCDG00000016415 zgc:153615 (ENSDCDG00000016441) selenot1a (ENSDCDG00000016445) SERP1 (ENSDCDG00000016448) pcyt1aa (ENSDCDG00000016456) ap2m1a (ENSDCDG00000016469) dvl3a (ENSDCDG00000016480) thpo (ENSDCDG00000016507) CLCN2 (ENSDCDG00000016547) fam131aa (ENSDCDG00000016769) eif4g1a (ENSDCDG00000016816) tfa (ENSDCDG00000019511) ubxn7 (ENSDCDG00000019799) Otophysi ANCESTRAL SPECIES 3 ENSGT00940000155899.e.a ENSGT00530000063404.b ENSGT00940000156750 ENSGT00940000158998 ENSGT00390000003182 ENSGT00940000155295.y ENSGT00950000182917.b.a.b ENSGT00940000155638.wb.b ENSGT00940000153321.b.a ENSGT00940000153902.a ENSGT00940000154973.a.b ENSGT00390000013989.a ENSGT00390000013003.e.a ENSGT00940000157639 ENSGT00900000141021.a ENSGT00940000159889.b.b #22 ENSGT01030000234837 ENSGT00940000155136 ENSGT00940000157668 ENSGT00950000182916.a.b.a.a.a.a ENSGT00940000165098 ENSGT00390000012765 #31 ENSGT00940000159943 ENSGT00940000155026.d ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.b.a.b ENSGT00940000159228.a ENSGT00940000163422 ENSGT00940000154611.ad.a Characiphysae ANCESTRAL SPECIES 28 ENSGT00940000155899.e.a ENSGT00530000063404.b ENSGT00940000156750 ENSGT00940000158998 ENSGT00390000003182 ENSGT00940000155295.y ENSGT00950000182917.b.a.b ENSGT00940000155638.wb.b ENSGT00940000153321.b.a.h ENSGT00940000153902.a ENSGT00940000154973.a.b ENSGT00390000013989.a ENSGT00390000013003.e.a ENSGT00940000157639 ENSGT00900000141021.a ENSGT00940000159889.b.b #22 ENSGT00940000154660.b #23 ENSGT01030000234837 ENSGT00940000155136 ENSGT00940000157668 ENSGT00950000182916.a.b.a.a.a.a ENSGT00940000165098 ENSGT00390000012765 #31 ENSGT00940000159943 ENSGT00940000155026.d ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.b.a.b ENSGT00940000163422 ENSGT00940000154611.ad.a Channel catfish MODERN SPECIES 1 ATCAY (ENSIPUG00000025016) mibp (ENSIPUG00000025018) mydgf (ENSIPUG00000025020) tnfaip8l1 (ENSIPUG00000025021) ttc39c (ENSIPUG00000025023) ENSIPUG00000025029 ENSIPUG00000025030 ankrd29 (ENSIPUG00000025031) ENSIPUG00000025032 plekhb2 (ENSIPUG00000025035) ENSIPUG00000025038 ENSIPUG00000025040 ENSIPUG00000025041 stx6 (ENSIPUG00000025042) Ier5 (ENSIPUG00000025045) tal1 (ENSIPUG00000025046) #22 pdzk1ip1 (ENSIPUG00000025047) patj (ENSIPUG00000025049) tm2d1 (ENSIPUG00000025063) nfia (ENSIPUG00000025065) frem1b (ENSIPUG00000025069) atpaf1 (ENSIPUG00000025073) #31 ENSIPUG00000025076 nrd1b (ENSIPUG00000025078) axdnd1 (ENSIPUG00000025082) nphs2 (ENSIPUG00000025085) tdrd5 (ENSIPUG00000025087) fam163a (ENSIPUG00000025089) rabgap1l (ENSIPUG00000025092) GPR52 (ENSIPUG00000025095) ifi44f5 (ENSIPUG00000025096) Characiphysae_b ANCESTRAL SPECIES 25 ENSGT00940000155899.e.a ENSGT00530000063404.b ENSGT00940000156750 ENSGT00940000158998 ENSGT00390000003182 ENSGT00940000155295.y ENSGT00950000182917.b.a.b ENSGT00940000155638.wb.b ENSGT00940000153321.b.a.h ENSGT00940000153902.a ENSGT00940000154973.a.b ENSGT00390000013989.a ENSGT00390000013003.e.a ENSGT00940000157639 ENSGT00900000141021.a ENSGT00940000159889.b.b #22 ENSGT00940000154660.b #23 ENSGT01030000234837 ENSGT00940000155136 ENSGT00940000157668 ENSGT00950000182916.a.b.a.a.a.a ENSGT00940000165098 ENSGT00390000012765 #31 ENSGT00940000159943 ENSGT00940000155026.d ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.b.a.b ENSGT00940000163422 ENSGT00940000154611.ad.a Characoidei ANCESTRAL SPECIES 26 ENSGT00940000155899.e.a ENSGT00530000063404.b ENSGT00940000156750 ENSGT00940000158998 ENSGT00390000003182 ENSGT00940000155295.y ENSGT00950000182917.b.a.b ENSGT00940000155638.wb.b ENSGT00940000153321.b.a.h ENSGT00940000153902.a ENSGT00940000154973.a.b ENSGT00390000013989.a ENSGT00390000013003.e.a ENSGT00940000157639 ENSGT00900000141021.a ENSGT00940000159889.b.b #22 ENSGT00940000154660.b #23 ENSGT01030000234837 ENSGT00940000155136 ENSGT00940000157668 ENSGT00950000182916.a.b.a.a.a.a ENSGT00940000165098 ENSGT00390000012765 #31 ENSGT00940000159943 ENSGT00940000155026.d ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.b.a.b ENSGT00940000163422 ENSGT00940000154611.ad.a Mexicana tetra MODERN SPECIES 20 rtca (ENSAMXG00000043271) dbt (ENSAMXG00000017968) ENSAMXG00000030280 lrrc39 (ENSAMXG00000031024) trmt13 (ENSAMXG00000017963) OSBPL1A (ENSAMXG00000017960) ENSAMXG00000017959 ttc39c (ENSAMXG00000017958) ENSAMXG00000017948 ENSAMXG00000017944 ENSAMXG00000017932 plekhb2 (ENSAMXG00000043456) ENSAMXG00000040430 stx6 (ENSAMXG00000035000) ier5 (ENSAMXG00000025066) tal1 (ENSAMXG00000029567) #22 pdzk1ip1 (ENSAMXG00000030422) #23 ENSAMXG00000039719 PATJ (ENSAMXG00000017920) tm2d1 (ENSAMXG00000017918) nfia (ENSAMXG00000017908) frem1b (ENSAMXG00000017882) atpaf1 (ENSAMXG00000017879) #31 ENSAMXG00000042882 nrd1b (ENSAMXG00000017875) axdnd1 (ENSAMXG00000017867) nphs2 (ENSAMXG00000017851) ENSAMXG00000017846 FAM163A (ENSAMXG00000040583) RABGAP1L (ENSAMXG00000016106) hnrnpm (ENSAMXG00000016073) Red-bellied piranha MODERN SPECIES 74 rtca (ENSPNAG00000022270) dbt (ENSPNAG00000022257) ENSPNAG00000022176 lrrc39 (ENSPNAG00000022168) trmt13 (ENSPNAG00000022130) OSBPL1A (ENSPNAG00000022096) ttc39c (ENSPNAG00000006848) ENSPNAG00000021799 ENSPNAG00000021698 ankrd29 (ENSPNAG00000021664) ENSPNAG00000021653 plekhb2 (ENSPNAG00000021605) ENSPNAG00000021571 stx6 (ENSPNAG00000003688) ier5 (ENSPNAG00000021525) tal1 (ENSPNAG00000021512) #22 ENSPNAG00000021506 PATJ (ENSPNAG00000021485) tm2d1 (ENSPNAG00000021422) nfia (ENSPNAG00000021390) frem1b (ENSPNAG00000021300) atpaf1 (ENSPNAG00000021133) #31 ENSPNAG00000021114 nrd1b (ENSPNAG00000021103) axdnd1 (ENSPNAG00000021073) nphs2 (ENSPNAG00000021048) ENSPNAG00000020990 FAM163A (ENSPNAG00000020952) RABGAP1L (ENSPNAG00000020917) GPR52 (ENSPNAG00000020780) hnrnpm (ENSPNAG00000020740) Electric eel MODERN SPECIES 89 ttc39c (ENSEEEG00000017392) ENSEEEG00000017389 ankrd29 (ENSEEEG00000017384) VPS4B (ENSEEEG00000017188) plekhb2 (ENSEEEG00000017185) stx6 (ENSEEEG00000017182) tal1 (ENSEEEG00000017181) #22 pdzk1ip1 (ENSEEEG00000017179) #23 PATJ (ENSEEEG00000017177) tm2d1 (ENSEEEG00000017176) nfia (ENSEEEG00000017133) frem1b (ENSEEEG00000017127) atpaf1 (ENSEEEG00000017125) #31 ENSEEEG00000017124 nrd1b (ENSEEEG00000016978) axdnd1 (ENSEEEG00000016970) nphs2 (ENSEEEG00000016969) ENSEEEG00000016967 FAM163A (ENSEEEG00000016965) RABGAP1L (ENSEEEG00000016729) ifi44f5 (ENSEEEG00000016708) hnrnpm (ENSEEEG00000016654) Cyprinoidei ANCESTRAL SPECIES 39 ENSGT00940000155899.e.a ENSGT00530000063404.b ENSGT00940000156750 ENSGT00940000158998 ENSGT00390000003182 ENSGT00940000155295.y ENSGT00950000182917.b.a.b ENSGT00940000155638.wb.b ENSGT00940000153321.b.a ENSGT00940000153902.a ENSGT00940000154973.a.b ENSGT00390000013989.a ENSGT00390000013003.e.a ENSGT00940000157639 ENSGT00900000141021.a ENSGT00940000159889.b.b #22 ENSGT00940000154660.b #23 ENSGT01030000234837 ENSGT00940000155136 ENSGT00940000157668 ENSGT00950000182916.a.b.a.a.a.a ENSGT00940000165098 ENSGT00390000012765 #31 ENSGT00940000159943 ENSGT00940000155026.d ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159228.b.a.b ENSGT00940000159228.a ENSGT00940000163422 ENSGT00940000154611.bd Zebrafish MODERN SPECIES 14 vcam1b (ENSDARG00000062479) cdc14ab (ENSDARG00000057016) rtca (ENSDARG00000002215) dbt (ENSDARG00000101561) lrrc39 (ENSDARG00000071465) trmt13 (ENSDARG00000102846) OSBPL1A (ENSDARG00000105147) ttc39c (ENSDARG00000102308) ENSDARG00000071462 ENSDARG00000042753 ankrd29 (ENSDARG00000057159) plekhb2 (ENSDARG00000013928) ENSDARG00000071458 stx6 (ENSDARG00000042742) ier5 (ENSDARG00000009881) tal1 (ENSDARG00000019930) #22 pdzk1ip1 (ENSDARG00000017127) #23 PATJ (ENSDARG00000024964) ENSDARG00000093333 tm2d1 (ENSDARG00000057042) nfia (ENSDARG00000062420) frem1b (ENSDARG00000062402) atpaf1 (ENSDARG00000042799) #31 ENSDARG00000114797 nrd1b (ENSDARG00000062372) axdnd1 (ENSDARG00000062355) nphs2 (ENSDARG00000042850) tdrd5 (ENSDARG00000071450) fam163ab (ENSDARG00000093021) ENSDARG00000061757 GPR52 (ENSDARG00000093460) Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 11 ENSGT00940000155899.e.a.a ENSGT00530000063404.b.u ENSGT00940000156750.d.b ENSGT00940000171073 ENSGT00940000158998 ENSGT00390000003182.b ENSGT00940000155295.y.k ENSGT00950000182917.b.a.b.h ENSGT00940000153321.b.a.f ENSGT00940000153902.a.c ENSGT00940000154973.a.b.d ENSGT00390000013989.a.b ENSGT00390000013003.e.a.a.b ENSGT00940000157639.o ENSGT00900000141021.a.b ENSGT00940000159889.b.b.e.a #22 ENSGT00940000154660.b #23 ENSGT00940000155136.hb ENSGT00940000157668.n ENSGT00950000182916.a.b.a.a.a.a.d ENSGT00940000165098 ENSGT00390000012765.a #31 ENSGT00940000159943.e.b ENSGT00940000155026.d ENSGT00390000005554 ENSGT01030000234614.B.b.e ENSGT00390000001360.r.a ENSGT00940000159228.b.a.b.a ENSGT00940000163422 ENSGT00940000154611.ad.a.k.b ENSGT00940000163581.f.a.hb.a Cyprininae_a ANCESTRAL SPECIES 91 ENSGT00940000155899.e.a.a ENSGT00530000063404.b.u ENSGT00940000156750.d.b ENSGT00940000171073 ENSGT00940000158998 ENSGT00390000003182.b ENSGT00940000155295.y.k ENSGT00950000182917.b.a.b.h ENSGT00940000153321.b.a.f ENSGT00940000153902.a.c ENSGT00940000154973.a.b.d ENSGT00390000013989.a.b ENSGT00390000013003.e.a.a.b ENSGT00940000157639.o ENSGT00900000141021.a.b ENSGT00940000159889.b.b.e.a #22 ENSGT01040000244250 ENSGT00940000155136.hb ENSGT00940000157668.n ENSGT00950000182916.a.b.a.a.a.a.d ENSGT00940000165098 ENSGT00390000012765.a #31 ENSGT00940000159943.e.b ENSGT00940000155026.d ENSGT00390000005554 ENSGT01030000234614.B.b.f ENSGT00390000001360.r.b ENSGT00940000159228.b.a.b.b ENSGT00940000154611.ad.a.k.a ENSGT00940000163422.c ENSGT00940000163581.f.a.gb.b.a.b Common carp reference MODERN SPECIES 43 vcam1b (ENSCCRG00000010179) cdc14ab (ENSCCRG00000010195) rtca (ENSCCRG00000010205) dbt (ENSCCRG00000010348) ENSCCRG00000010349 lrrc39 (ENSCCRG00000010353) trmt13 (ENSCCRG00000010354) OSBPL1A (ENSCCRG00000011939) ttc39c (ENSCCRG00000010716) ENSCCRG00000012160 ankrd29 (ENSCCRG00000066070) ENSCCRG00000081158 plekhb2 (ENSCCRG00000012221) ENSCCRG00000012223 stx6 (ENSCCRG00000068725) tal1 (ENSCCRG00000038628) #22 PATJ (ENSCCRG00000006794) tm2d1 (ENSCCRG00000069940) nfia (ENSCCRG00000006812) atpaf1 (ENSCCRG00000056526) #31 nphs2 (ENSCCRG00000027287) tdrd5 (ENSCCRG00000008348) ENSCCRG00000021988 ENSCCRG00000015467 ENSCCRG00000015510 ENSCCRG00000007709 ENSCCRG00000007547 marchf2 (ENSCCRG00000079083) hnrnpm (ENSCCRG00000075767) ENSCCRG00000021333 ENSCCRG00000064766 Golden-line barbel MODERN SPECIES 97 ENSSGRG00000037647 cdc14ab (ENSSGRG00000037625) rtca (ENSSGRG00000037422) dbt (ENSSGRG00000037406) ENSSGRG00000037405 lrrc39 (ENSSGRG00000037404) ENSSGRG00000037403 OSBPL1A (ENSSGRG00000036607) ttc39c (ENSSGRG00000036374) ENSSGRG00000036371 ankrd29 (ENSSGRG00000036354) ENSSGRG00000036346 plekhb2 (ENSSGRG00000036345) stx6 (ENSSGRG00000036342) ier5 (ENSSGRG00000036341) tal1 (ENSSGRG00000036340) #22 ENSSGRG00000036339 PATJ (ENSSGRG00000036337) tm2d1 (ENSSGRG00000036335) sugct (ENSSGRG00000036334) gyg1b (ENSSGRG00000036332) bdh1 (ENSSGRG00000036331) NCK1 (ENSSGRG00000036330) slc35g2b (ENSSGRG00000036328) slc35g2b (ENSSGRG00000036327) idi1 (ENSSGRG00000036325) wdr37 (ENSSGRG00000036170) ADARB2 (ENSSGRG00000036164) PFKP (ENSSGRG00000032565) ENSSGRG00000032540 ENSSGRG00000032539 Goldfish MODERN SPECIES 41 zbtb37 (ENSCARG00000034814) dph5 (ENSCARG00000034839) slc30a7 (ENSCARG00000035071) vcam1b (ENSCARG00000035179) ENSCARG00000035188 dph5 (ENSCARG00000035198) slc30a7 (ENSCARG00000035217) OSBPL1A (ENSCARG00000035273) ttc39c (ENSCARG00000036841) ankrd29 (ENSCARG00000036917) ENSCARG00000037173 plekhb2 (ENSCARG00000038119) ENSCARG00000038127 stx6 (ENSCARG00000038137) ier5 (ENSCARG00000038184) tal1 (ENSCARG00000038192) #22 pdzk1ip1 (ENSCARG00000038202) #23 PATJ (ENSCARG00000038233) tm2d1 (ENSCARG00000038401) nfia (ENSCARG00000038465) atpaf1 (ENSCARG00000038973) #31 ENSCARG00000038995 nphs2 (ENSCARG00000039018) FAM163A (ENSCARG00000039048) RABGAP1L (ENSCARG00000039108) ENSCARG00000040375 ENSCARG00000040462 marchf2 (ENSCARG00000040593) hnrnpm (ENSCARG00000040632) PIP5K1C (ENSCARG00000040940) gpx4a (ENSCARG00000041135) Cyprininae ANCESTRAL SPECIES 281 ENSGT00390000009609 ENSGT00940000155899.e.a.b ENSGT00530000063404.b.v ENSGT00940000156750.d.a ENSGT00390000003182.a ENSGT00940000155295.y.l.a ENSGT00950000182917.b.a.b.g ENSGT00940000155638.wb.b ENSGT00940000153321.b.a.g ENSGT00940000153902.a.d ENSGT00940000154973.a.b.c ENSGT00390000013989.a.a ENSGT00390000013003.e.a.a.a ENSGT00940000157639.p ENSGT00900000141021.a.a ENSGT00940000159889.b.b.e.b #22 ENSGT01030000234837 ENSGT00940000155136.ib ENSGT00940000157668.m ENSGT00950000182916.a.b.a.a.a.a.c Goldfish MODERN SPECIES 14 slc30a7 (ENSCARG00000006329) vcam1b (ENSCARG00000006295) GPR88 (ENSCARG00000006289) cdc14ab (ENSCARG00000006044) rtca (ENSCARG00000005956) dbt (ENSCARG00000005801) OSBPL1A (ENSCARG00000004924) ttc39c (ENSCARG00000004750) ENSCARG00000004721 ENSCARG00000004697 ENSCARG00000004663 plekhb2 (ENSCARG00000004648) ENSCARG00000004636 stx6 (ENSCARG00000004618) ier5 (ENSCARG00000004612) tal1 (ENSCARG00000004607) #22 ENSCARG00000004603 PATJ (ENSCARG00000004482) tm2d1 (ENSCARG00000004436) nfia (ENSCARG00000003945) frem1b (ENSCARG00000015099) ENSCARG00000015063 nrd1b (ENSCARG00000011749) axdnd1 (ENSCARG00000011591) nphs2 (ENSCARG00000011573) tdrd5 (ENSCARG00000011563) GPR52 (ENSCARG00000011555) RABGAP1L (ENSCARG00000011366) ENSCARG00000011340 ENSCARG00000011293 ENSCARG00000011257 Cyprininae_a ANCESTRAL SPECIES 246 ENSGT00940000156511.b.mb.b ENSGT00940000155899.e.a.b ENSGT00530000063404.b.v ENSGT00940000156750.d.a ENSGT00390000003182.a ENSGT00940000155295.y.l.a ENSGT00950000182917.b.a.b.g ENSGT00940000155638.wb.b ENSGT00940000153321.b.a.g ENSGT00940000153902.a.d ENSGT00940000154973.a.b.c ENSGT00390000013989.a.a ENSGT00390000013003.e.a.a.a ENSGT00940000157639.p ENSGT00900000141021.a.a ENSGT00940000159889.b.b.e.b #22 ENSGT01030000234837 ENSGT00940000159889.b.a #22 ENSGT00940000154660.b #23 ENSGT00940000155136.ib ENSGT00940000157668.m ENSGT00950000182916.a.b.a.a.a.a.c Common carp reference MODERN SPECIES 5 ENSCCRG00000062004 vcam1b (ENSCCRG00000010372) cdc14ab (ENSCCRG00000004385) rtca (ENSCCRG00000071910) dbt (ENSCCRG00000053217) trmt13 (ENSCCRG00000010191) OSBPL1A (ENSCCRG00000010216) ttc39c (ENSCCRG00000012152) ENSCCRG00000074748 ENSCCRG00000010721 ankrd29 (ENSCCRG00000012167) ENSCCRG00000060313 plekhb2 (ENSCCRG00000041900) ENSCCRG00000056903 ier5 (ENSCCRG00000031035) tal1 (ENSCCRG00000031038) #22 ENSCCRG00000054830 ENSCCRG00000076969 ENSCCRG00000012234 PATJ (ENSCCRG00000075387) tm2d1 (ENSCCRG00000068740) nfia (ENSCCRG00000077143) ENSCCRG00000069674 frem1b (ENSCCRG00000003389) atpaf1 (ENSCCRG00000007113) #31 ENSCCRG00000007115 nrd1b (ENSCCRG00000007124) axdnd1 (ENSCCRG00000008234) nphs2 (ENSCCRG00000008239) tdrd5 (ENSCCRG00000027290) FAM163A (ENSCCRG00000042112) Cyprininae ANCESTRAL SPECIES ENSGT00940000159889.b.b.f #22 Cyprininae_a ANCESTRAL SPECIES ENSGT00940000159889.b.b.f #22 Golden-line barbel MODERN SPECIES 3979 ENSSGRG00000003885 #22 Osteoglossiformes ANCESTRAL SPECIES 2 ENSGT00530000063404.b ENSGT00940000155899.e.a ENSGT00390000009609 ENSGT00940000156511.b ENSGT00940000159571 ENSGT00390000010568 ENSGT01050000244887.A.a.b.g ENSGT00940000159554.b ENSGT00940000157967 ENSGT00940000157143.a ENSGT00390000007310 #21 ENSGT00390000013003.e.a ENSGT00940000157639 ENSGT00900000141021.a ENSGT00390000013003.e.b ENSGT00940000159889.b.b #22 ENSGT00940000155136 ENSGT00940000157668 ENSGT00950000182916.a.b.a.a.a.a ENSGT00940000165098 ENSGT00390000012765 #31 ENSGT00940000159943 ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.b.b ENSGT00940000160221.c ENSGT00390000018319.a.b.b.b ENSGT00940000175916 ENSGT00950000182964.a.b.b.a.b.a ENSGT01100000263497.E.a.b.m P. kingsleyae MODERN SPECIES 136 dbt (ENSPKIG00000001602) rtca (ENSPKIG00000001653) cdc14ab (ENSPKIG00000001732) GPR88 (ENSPKIG00000001846) ENSPKIG00000001873 slc30a7 (ENSPKIG00000001921) dph5 (ENSPKIG00000001985) s1pr1 (ENSPKIG00000002010) zbtb37 (ENSPKIG00000002022) serpinc1 (ENSPKIG00000002045) RC3H1 (ENSPKIG00000002107) stil (ENSPKIG00000002226) #21 ENSPKIG00000002291 stx6 (ENSPKIG00000002328) ier5 (ENSPKIG00000002367) tal1 (ENSPKIG00000002391) #22 PATJ (ENSPKIG00000002506) tm2d1 (ENSPKIG00000002662) nfia (ENSPKIG00000002775) frem1b (ENSPKIG00000002942) atpaf1 (ENSPKIG00000003063) #31 ENSPKIG00000003091 axdnd1 (ENSPKIG00000003124) nphs2 (ENSPKIG00000003168) ENSPKIG00000003193 FAM163A (ENSPKIG00000003216) ENSPKIG00000003250 GPR52 (ENSPKIG00000003297) MAP1S (ENSPKIG00000003342) CARTPT (ENSPKIG00000003381) ENSPKIG00000003398 Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES 18 ENSSFOG00015026822 mfsd14a1 (ENSSFOG00015018133) DBT (ENSSFOG00015018055) ENSSFOG00015018041 ENSSFOG00015027277 ENSSFOG00015018032 ENSSFOG00015032500 ENSSFOG00015033247 extl2 (ENSSFOG00015018004) zgc:110366 (ENSSFOG00015017961) S1PR1 (ENSSFOG00015017950) zbtb37 (ENSSFOG00015032125) RC3H1 (ENSSFOG00015017897) ENSSFOG00015017883 ENSSFOG00015017873 tal1 (ENSSFOG00015024658) #22 nfia (ENSSFOG00015017821) nrd1b (ENSSFOG00015017772) FAM163A (ENSSFOG00015017745) GPR52 (ENSSFOG00015031074) ENSSFOG00015017651 gadd45bb (ENSSFOG00015030803) gng7 (ENSSFOG00015031675) zgc:101744 (ENSSFOG00015017605) thop1 (ENSSFOG00015017561) ENSSFOG00015017531 elavl1a (ENSSFOG00015017503) mpv17l2 (ENSSFOG00015017475) dhx9 (ENSSFOG00015017378) smg7 (ENSSFOG00015017252) ENSSFOG00015017210 Asian bonytongue MODERN SPECIES 24 trmt13 (ENSSFOG00015024349) lrrc39 (ENSSFOG00015017576) dbt (ENSSFOG00015017604) cdc14ab (ENSSFOG00015017656) GPR88 (ENSSFOG00015017720) vcam1b (ENSSFOG00015017729) slc30a7 (ENSSFOG00015017753) dph5 (ENSSFOG00015017804) s1pr1 (ENSSFOG00015017824) serpinc1 (ENSSFOG00015017831) RC3H1 (ENSSFOG00015017852) stil (ENSSFOG00015017882) #21 ENSSFOG00015017918 stx6 (ENSSFOG00015017934) ier5 (ENSSFOG00015017957) TAL1 (ENSSFOG00015025041) #22 PATJ (ENSSFOG00015018014) tm2d1 (ENSSFOG00015018060) nfia (ENSSFOG00015018123) atpaf1 (ENSSFOG00015033150) #31 ENSSFOG00015024981 nphs2 (ENSSFOG00015018378) ENSSFOG00015018451 FAM163A (ENSSFOG00015032934) GPR52 (ENSSFOG00015017728) RABGAP1L (ENSSFOG00015018610) ENSSFOG00015018756 ENSSFOG00015029791 ENSSFOG00015030925 ENSSFOG00015029900 ENSSFOG00015024593 Elephant shark MODERN SPECIES 1597 ENSCMIG00000019123 elavl4 (ENSCMIG00000019132) #10 agbl4 (ENSCMIG00000019163) #12 ENSCMIG00000019181 #13 slc5a9 (ENSCMIG00000019236) #15 zgc:171480 (ENSCMIG00000019361) ENSCMIG00000019364 TRABD2B (ENSCMIG00000019370) #17 ENSCMIG00000019373 #18 foxe3 (ENSCMIG00000019375) cmpk (ENSCMIG00000019378) stil (ENSCMIG00000019380) #21 tal1 (ENSCMIG00000019384) #22 ENSCMIG00000019386 PATJ (ENSCMIG00000019399) tm2d1 (ENSCMIG00000019416) nfia (ENSCMIG00000019423) frem1b (ENSCMIG00000019432) ENSCMIG00000019434 ENSCMIG00000019438 hook1 (ENSCMIG00000019441) ENSCMIG00000019442 fggy (ENSCMIG00000019450) jun (ENSCMIG00000019457) ENSCMIG00000019458 ENSCMIG00000019462 ENSCMIG00000019464 mysm1 (ENSCMIG00000019466) Cyclostomata DUPLICATION Cyclostomata ANCESTRAL SPECIES ENSGT00940000159889.c #22 Hagfish DUPLICATION Hagfish MODERN SPECIES 152 ENSEBUG00000010603 ENSEBUG00000003329 ENSEBUG00000014122 TMEM38A (ENSEBUG00000016575) ENSEBUG00000007238 #22 ENSEBUG00000007668 ENSEBUG00000016698 ENSEBUG00000001516 #21 ENSEBUG00000004719 #18 trabd2a (ENSEBUG00000008212) Hagfish MODERN SPECIES 1084 ENSEBUG00000007383 #20 cmpk (ENSEBUG00000000986) ENSEBUG00000009364 #22 SMIM7 (ENSEBUG00000014286) ENSEBUG00000009145 ENSEBUG00000013460 ENSEBUG00000012520 ENSEBUG00000000338 ENSEBUG00000013883 Lamprey MODERN SPECIES 5060 ENSPMAG00000002259 #22 Cyclostomata ANCESTRAL SPECIES ENSGT00940000159889.d #22 Hagfish MODERN SPECIES 305 ENSEBUG00000005347 pdcd5 (ENSEBUG00000010212) ube2c (ENSEBUG00000001540) ENSEBUG00000005504 ranbp9 (ENSEBUG00000008589) ENSEBUG00000016229 ENSEBUG00000010564 dpm1 (ENSEBUG00000012415) pard6a (ENSEBUG00000010177) ENSEBUG00000004790 ENSEBUG00000002674 ENSEBUG00000012997 ENSEBUG00000014429 ENSEBUG00000004933 ENSEBUG00000005026 ENSEBUG00000014615 #22 ENSEBUG00000011770 ENSEBUG00000002615 ENSEBUG00000010482 ENSEBUG00000013300 ENSEBUG00000016660