Ovalentaria ANCESTRAL SPECIES 5 ENSGT00940000153304.C ENSGT00940000156181.B ENSGT00940000156304.c.b ENSGT00940000159203 ENSGT00940000164519.c.a ENSGT00940000155899.e.b ENSGT00940000156209.v.a ENSGT00530000063681.b.b ENSGT00940000156460.A ENSGT00390000000867 ENSGT00940000156470.u.b ENSGT00390000005318.a.a.b ENSGT00390000016559 ENSGT00940000159687 ENSGT00940000156236.a.b #21 ENSGT00390000003574.b #22 ENSGT00940000154149.b.a.h #23 ENSGT00940000157757.g.b #24 ENSGT00930000151041 #26 ENSGT00530000063751.a.b #27 ENSGT00730000111014.o.a #28 ENSGT00390000012568 #29 ENSGT00500000044896 #30 ENSGT01050000244924.a.b.h #31 ENSGT00940000153649.A #32 ENSGT00940000153886.a.b #33 ENSGT00940000158863 #34 ENSGT00940000159497 #35 ENSGT00940000161095 #36 ENSGT00940000154882 #37 ENSGT01030000234618.B Atherinomorphae ANCESTRAL SPECIES 4 ENSGT00940000159223.d #7 ENSGT00950000182903.a.a.d #8 ENSGT00900000141083.c.a #9 ENSGT00940000160165.b #10 ENSGT00940000159675 #11 ENSGT00950000183179.b.b #12 ENSGT00950000183086.a.a.b.h.b #13 ENSGT01030000234629.C.a #14 ENSGT00940000154369.g.a #15 ENSGT00940000158995.b #16 ENSGT00940000163126.a.a #17 ENSGT00390000000051.b #18 ENSGT00940000154412.C.c.a #19 ENSGT01030000234515.a.b.b.b #20 ENSGT00940000156236.a.b #21 ENSGT00390000003574.b #22 ENSGT00940000154149.b.a.h #23 ENSGT00940000157757.g.b #24 ENSGT00930000151041 #26 ENSGT00530000063751.a.b #27 ENSGT00730000111014.o.a #28 ENSGT00390000012568 #29 ENSGT00500000044896 #30 ENSGT01050000244924.a.b.h #31 ENSGT00940000153649.A #32 ENSGT00940000153886.a.b #33 ENSGT00940000158863 #34 ENSGT00940000159497 #35 ENSGT00940000161095 #36 ENSGT00940000154882 #37 ENSGT01030000234618.B Cyprinodontiformes ANCESTRAL SPECIES 5 ENSGT00940000159223.d #7 ENSGT00950000182903.a.a.d #8 ENSGT00900000141083.c.a #9 ENSGT00940000160165.b #10 ENSGT00940000159675 #11 ENSGT00950000183179.b.b #12 ENSGT00950000183086.a.a.b.h.b #13 ENSGT01030000234629.C.a #14 ENSGT00940000154369.g.a #15 ENSGT00940000158995.b #16 ENSGT00940000163126.a.a #17 ENSGT00390000000051.b #18 ENSGT00940000154412.C.c.a #19 ENSGT01030000234515.a.b.b.b #20 ENSGT00940000156236.a.b #21 ENSGT00390000003574.b #22 ENSGT00940000154149.b.a.h #23 ENSGT00940000157757.g.b #24 ENSGT00940000154395.a.a.a.b.a #25 ENSGT00930000151041 #26 ENSGT00530000063751.a.b #27 ENSGT00730000111014.o.a #28 ENSGT00390000012568 #29 ENSGT00500000044896 #30 ENSGT01050000244924.a.b.h #31 ENSGT00940000153649.A #32 ENSGT00940000153886.a.b #33 ENSGT00940000158863 #34 ENSGT00940000159497 #35 ENSGT00940000161095 #36 ENSGT00940000154882 #37 Aplocheiloidei ANCESTRAL SPECIES 19 ENSGT00940000159223.d #7 ENSGT00950000182903.a.a.d #8 ENSGT00900000141083.c.a #9 ENSGT00940000160165.b #10 ENSGT00940000159675 #11 ENSGT00950000183179.b.b #12 ENSGT00950000183086.a.a.b.h.b #13 ENSGT01030000234629.C.a #14 ENSGT00940000154369.g.a #15 ENSGT00940000158995.b #16 ENSGT00940000163126.a.a #17 ENSGT00390000000051.b #18 ENSGT00940000154412.C.c.a #19 ENSGT01030000234515.a.b.b.b #20 ENSGT00940000156236.a.b #21 ENSGT00390000003574.b #22 ENSGT00940000154149.b.a.h #23 ENSGT00940000157757.g.b #24 ENSGT00940000154395.a.a.a.b.a #25 ENSGT00930000151041 #26 ENSGT00530000063751.a.b #27 ENSGT00730000111014.o.a #28 ENSGT00390000012568 #29 ENSGT00500000044896 #30 ENSGT01050000244924.a.b.h #31 ENSGT00940000153649.A #32 ENSGT00940000153886.a.b #33 ENSGT00940000158863 #34 ENSGT00940000159497 #35 ENSGT00940000154882 #37 ENSGT01030000234618.B Mangrove rivulus MODERN SPECIES 64 dvl3a (ENSKMAG00000008628) #8 copb2 (ENSKMAG00000008663) #9 rbp2b (ENSKMAG00000008760) #10 rbp1.1 (ENSKMAG00000008788) #11 NMNAT3 (ENSKMAG00000008800) #12 clstn2a (ENSKMAG00000008838) #13 spsb4a (ENSKMAG00000008932) #14 slc25a36a (ENSKMAG00000008956) #15 MARCHF2 (ENSKMAG00000009002) #16 rab11bb (ENSKMAG00000009033) #17 TIMM44 (ENSKMAG00000009060) #18 CTXN1 (ENSKMAG00000009121) #19 CERS4 (ENSKMAG00000009138) #20 ENSKMAG00000009157 PDC (ENSKMAG00000009178) #21 kifap3b (ENSKMAG00000009197) #22 ENSKMAG00000009283 ENSKMAG00000009312 #23 OLFML2B (ENSKMAG00000009333) #24 ENSKMAG00000009357 #25 dusp12 (ENSKMAG00000009384) #26 TPR (ENSKMAG00000009412) #28 odr4 (ENSKMAG00000009510) #29 dpydb (ENSKMAG00000009544) #30 ptbp2b (ENSKMAG00000009644) #31 CHD7 (ENSKMAG00000009724) #32 rab2a (ENSKMAG00000009799) #33 ca8 (ENSKMAG00000009850) #34 tox (ENSKMAG00000009900) #35 cryz (ENSKMAG00000009924) #37 DARS2 (ENSKMAG00000009973) Turquoise killifish MODERN SPECIES 1618 ENSNFUG00015017891 dvl3a (ENSNFUG00015017928) #8 COPB2 (ENSNFUG00015018238) #9 rbp2b (ENSNFUG00015019621) #10 NMNAT3 (ENSNFUG00015019671) #11 NMNAT3 (ENSNFUG00015019677) #12 clstn2a (ENSNFUG00015019721) #13 SPSB4 (ENSNFUG00015020062) #14 slc25a36a (ENSNFUG00015020070) #15 MARCH2 (ENSNFUG00015020081) #16 Nfu_g_1_020481 (ENSNFUG00015020092) #17 TIMM44 (ENSNFUG00015020126) #18 CTXN1 (ENSNFUG00015020167) #19 CERS4 (ENSNFUG00015020174) #20 OLPD-R (ENSNFUG00015020202) #21 KIFAP3B (ENSNFUG00015020250) #22 ENSNFUG00015021367 #23 OLFML2BB (ENSNFUG00015021376) #24 dusp12 (ENSNFUG00015021389) #26 prg4a (ENSNFUG00015021413) #27 TPRA (ENSNFUG00015021506) #28 C2H1ORF27 (ENSNFUG00015023001) #29 dpydb (ENSNFUG00015023011) #30 PTBP2B (ENSNFUG00015023143) #31 CHD7 (ENSNFUG00015023198) #32 ENSNFUG00015023291 RAB2A (ENSNFUG00015023295) #33 ENSNFUG00015023305 CA8 (ENSNFUG00015023308) #34 ENSNFUG00015023317 TOX (ENSNFUG00015023320) #35 Cyprinodontoidei ANCESTRAL SPECIES 2 ENSGT00940000157384.a ENSGT00940000159223.d #7 ENSGT00950000182903.a.a.d #8 ENSGT00900000141083.c.a #9 ENSGT00940000159675 #11 ENSGT00950000183179.b.b #12 ENSGT00950000183086.a.a.b.h.b #13 ENSGT01030000234629.C.a #14 ENSGT00940000154369.g.a #15 ENSGT00940000158995.b #16 ENSGT00940000163126.a.a #17 ENSGT00390000000051.b #18 ENSGT00940000154412.C.c.a #19 ENSGT01030000234515.a.b.b.b #20 ENSGT00940000156236.a.b #21 ENSGT00390000003574.b #22 ENSGT00940000154149.b.a.h #23 ENSGT00940000157757.g.b #24 ENSGT00940000154395.a.a.a.b.a #25 ENSGT00930000151041 #26 ENSGT00530000063751.a.b #27 ENSGT00730000111014.o.a #28 ENSGT00390000012568 #29 ENSGT00500000044896 #30 ENSGT01050000244924.a.b.h #31 ENSGT00940000153649.A #32 ENSGT00940000153886.a.b #33 ENSGT00940000158863 #34 ENSGT00940000159497 #35 ENSGT00940000161095.hb #36 ENSGT00940000154882 #37 Poeciliinae ANCESTRAL SPECIES 6 ENSGT00940000157384.a ENSGT00940000159223.d #7 ENSGT00950000182903.a.a.d #8 ENSGT00900000141083.c.a #9 ENSGT00940000159675 #11 ENSGT00950000183179.b.b #12 ENSGT00950000183086.a.a.b.h.b #13 ENSGT01030000234629.C.a #14 ENSGT00940000154369.g.a #15 ENSGT00940000158995.b #16 ENSGT00940000163126.a.a #17 ENSGT00390000000051.b #18 ENSGT00940000154412.C.c.a #19 ENSGT01030000234515.a.b.b.b #20 ENSGT00940000156236.a.b #21 ENSGT00390000003574.b #22 ENSGT00940000154149.b.a.h #23 ENSGT00940000157757.g.b #24 ENSGT00940000154395.a.a.a.b.a #25 ENSGT00930000151041 #26 ENSGT00530000063751.a.b #27 ENSGT00730000111014.o.a #28 ENSGT00390000012568 #29 ENSGT00500000044896 #30 ENSGT01050000244924.a.b.h #31 ENSGT00940000153649.A #32 ENSGT00940000153886.a.b #33 ENSGT00940000158863 #34 ENSGT00940000159497 #35 ENSGT00940000161095.hb #36 ENSGT00940000154882 #37 Poecilia ANCESTRAL SPECIES 19 ENSGT00940000157384.a ENSGT00940000159223.d #7 ENSGT00950000182903.a.a.d #8 ENSGT00900000141083.c.a #9 ENSGT00940000159675 #11 ENSGT00950000183179.b.b #12 ENSGT00950000183086.a.a.b.h.b #13 ENSGT01030000234629.C.a #14 ENSGT00940000154369.g.a #15 ENSGT00940000158995.b #16 ENSGT00940000163126.a.a #17 ENSGT00390000000051.b #18 ENSGT00940000154412.C.c.a #19 ENSGT01030000234515.a.b.b.b #20 ENSGT00940000156236.a.b #21 ENSGT00390000003574.b #22 ENSGT00940000154149.b.a.h #23 ENSGT00940000157757.g.b #24 ENSGT00940000154395.a.a.a.b.a #25 ENSGT00930000151041 #26 ENSGT00530000063751.a.b #27 ENSGT00730000111014.o.a #28 ENSGT00390000012568 #29 ENSGT00500000044896 #30 ENSGT01050000244924.a.b.h #31 ENSGT00940000153649.A #32 ENSGT00940000153886.a.b #33 ENSGT00940000158863 #34 ENSGT00940000159497 #35 ENSGT00940000161095.hb #36 ENSGT00940000154882 #37 NAME_6 ANCESTRAL SPECIES 204 ENSGT00940000156236.a.b #21 ENSGT00390000003574.b #22 ENSGT00940000154149.b.a.h #23 ENSGT00940000157757.g.b #24 ENSGT00940000154395.a.a.a.b.a #25 ENSGT00930000151041 #26 ENSGT00530000063751.a.b #27 ENSGT00730000111014.o.a #28 ENSGT00390000012568 #29 ENSGT00500000044896 #30 ENSGT01050000244924.a.b.h #31 ENSGT00940000153649.A #32 ENSGT00940000153886.a.b #33 ENSGT00940000158863 #34 ENSGT00940000159497 #35 ENSGT00940000161095.hb #36 ENSGT00940000154882 #37 Amazon molly MODERN SPECIES 422 dpydb (ENSPFOG00000005785) #30 ptbp2b (ENSPFOG00000005646) #31 CHD7 (ENSPFOG00000004891) #32 rab2a (ENSPFOG00000004786) #33 ca8 (ENSPFOG00000004700) #34 tox (ENSPFOG00000004558) #35 ENSPFOG00000004532 #36 cryz (ENSPFOG00000004423) #37 DARS2 (ENSPFOG00000004144) bpnt2 (ENSPFOG00000004054) ENSPFOG00000004047 trnau1apb (ENSPFOG00000003938) fitm1l (ENSPFOG00000003918) ENSPFOG00000022209 PDC (ENSPFOG00000003868) #21 kifap3b (ENSPFOG00000003506) #22 ENSPFOG00000024715 #23 myh7 (ENSPFOG00000003432) myh7 (ENSPFOG00000002250) ENSPFOG00000022911 lhx8a (ENSPFOG00000002129) klhl20 (ENSPFOG00000001873) inhbb (ENSPFOG00000001729) Sailfin molly MODERN SPECIES 2949 PDC (ENSPLAG00000016820) #21 kifap3b (ENSPLAG00000016880) #22 ENSPLAG00000016894 #23 OLFML2B (ENSPLAG00000016911) #24 Guppy MODERN SPECIES 447 dvl3a (ENSPREG00000014078) #8 ENSPREG00000014095 #8 copb2 (ENSPREG00000014106) #9 rbp1.1 (ENSPREG00000014144) #11 NMNAT3 (ENSPREG00000014156) #12 clstn2a (ENSPREG00000014196) #13 spsb4a (ENSPREG00000014221) #14 ENSPREG00000014238 ##15 ENSPREG00000014251 ##15 MARCHF2 (ENSPREG00000014259) #16 rab11bb (ENSPREG00000014269) #17 TIMM44 (ENSPREG00000014295) #18 CTXN1 (ENSPREG00000014346) #19 ENSPREG00000014369 #20 PDC (ENSPREG00000014388) #21 kifap3b (ENSPREG00000014417) #22 ENSPREG00000014481 #23 ENSPREG00000014488 #23 OLFML2B (ENSPREG00000014496) #24 dusp12 (ENSPREG00000014521) #26 prg4a (ENSPREG00000014538) #27 ENSPREG00000014558 #28 ENSPREG00000014589 #28 odr4 (ENSPREG00000014667) #29 dpydb (ENSPREG00000014688) #30 ptbp2b (ENSPREG00000014711) #31 CHD7 (ENSPREG00000014744) #32 ENSPREG00000014865 ENSPREG00000014870 rab2a (ENSPREG00000014888) #33 ca8 (ENSPREG00000014912) #34 Platyfish MODERN SPECIES 20 pcyt1aa (ENSXMAG00000019014) ap2m1a (ENSXMAG00000019001) #7 dvl3a (ENSXMAG00000018981) #8 copb2 (ENSXMAG00000018937) #9 rbp1.1 (ENSXMAG00000018933) #11 NMNAT3 (ENSXMAG00000018929) #12 clstn2a (ENSXMAG00000018890) #13 spsb4a (ENSXMAG00000018887) #14 slc25a36a (ENSXMAG00000018866) #15 MARCHF2 (ENSXMAG00000018861) #16 rab11bb (ENSXMAG00000011926) #17 TIMM44 (ENSXMAG00000018819) #18 CTXN1 (ENSXMAG00000026623) #19 ENSXMAG00000018778 #20 PDC (ENSXMAG00000018762) #21 kifap3b (ENSXMAG00000018739) #22 ENSXMAG00000026629 #23 OLFML2B (ENSXMAG00000018729) #24 ENSXMAG00000027606 dusp12 (ENSXMAG00000018722) #26 prg4a (ENSXMAG00000018717) #27 TPR (ENSXMAG00000018684) #28 odr4 (ENSXMAG00000018668) #29 dpydb (ENSXMAG00000018645) #30 ptbp2b (ENSXMAG00000018642) #31 CHD7 (ENSXMAG00000018590) #32 rab2a (ENSXMAG00000024267) #33 ca8 (ENSXMAG00000018565) #34 tox (ENSXMAG00000018560) #35 ENSXMAG00000024775 cryz (ENSXMAG00000018549) #37 NAME_4 ANCESTRAL SPECIES 9 ENSGT00940000157384.a ENSGT00940000159223.d #7 ENSGT00950000182903.a.a.d #8 ENSGT00900000141083.c.a #9 ENSGT00940000159675 #11 ENSGT00950000183179.b.b #12 ENSGT00950000183086.a.a.b.h.b #13 ENSGT01030000234629.C.a #14 ENSGT00940000154369.g.a #15 ENSGT00940000158995.b #16 ENSGT00940000163126.a.a #17 ENSGT00390000000051.b #18 ENSGT00940000154412.C.c.a #19 ENSGT01030000234515.a.b.b.b #20 ENSGT00940000156236.a.b #21 ENSGT00390000003574.b #22 ENSGT00940000154149.b.a.h #23 ENSGT00940000157757.g.b #24 ENSGT00930000151041 #26 ENSGT00530000063751.a.b #27 ENSGT00730000111014.o.a #28 ENSGT00390000012568 #29 ENSGT00500000044896 #30 ENSGT01050000244924.a.b.h #31 ENSGT00940000153649.A #32 ENSGT00940000153886.a.b #33 ENSGT00940000158863 #34 ENSGT00940000159497 #35 ENSGT00940000154882 #37 ENSGT01030000234618.B ENSGT00940000164879 Mummichog MODERN SPECIES 2508 PDC (ENSFHEG00000001461) #21 kifap3b (ENSFHEG00000001453) #22 ENSFHEG00000001441 #23 OLFML2B (ENSFHEG00000001437) #24 dusp12 (ENSFHEG00000001434) #26 prg4a (ENSFHEG00000001429) #27 TPR (ENSFHEG00000001411) #28 odr4 (ENSFHEG00000001356) #29 dpydb (ENSFHEG00000001338) #30 ptbp2b (ENSFHEG00000001320) #31 CHD7 (ENSFHEG00000001311) #32 rab2a (ENSFHEG00000001296) #33 ca8 (ENSFHEG00000001294) #34 tox (ENSFHEG00000001293) #35 cryz (ENSFHEG00000001290) #37 DARS2 (ENSFHEG00000001285) bpnt2 (ENSFHEG00000001277) Sheepshead minnow MODERN SPECIES 336 ENSCVAG00000016794 #12 clstn2a (ENSCVAG00000016907) #13 spsb4a (ENSCVAG00000016921) #14 ENSCVAG00000016936 slc25a36a (ENSCVAG00000016985) #15 MARCHF2 (ENSCVAG00000016997) #16 rab11bb (ENSCVAG00000017021) #17 TIMM44 (ENSCVAG00000017060) #18 ENSCVAG00000017123 #20 PDC (ENSCVAG00000017136) #21 kifap3b (ENSCVAG00000017254) #22 ENSCVAG00000017271 #23 OLFML2B (ENSCVAG00000017284) #24 dusp12 (ENSCVAG00000017311) #26 TPR (ENSCVAG00000017444) #28 odr4 (ENSCVAG00000017457) #29 dpydb (ENSCVAG00000017559) #30 ptbp2b (ENSCVAG00000017566) #31 CHD7 (ENSCVAG00000017584) #32 rab2a (ENSCVAG00000017623) #33 ca8 (ENSCVAG00000017645) #34 tox (ENSCVAG00000000458) #35 cryz (ENSCVAG00000017754) #37 DARS2 (ENSCVAG00000017840) bpnt2 (ENSCVAG00000017851) trnau1apb (ENSCVAG00000017866) Oryzias ANCESTRAL SPECIES 12 ENSGT00940000159223.d #7 ENSGT00950000182903.a.a.d #8 ENSGT00900000141083.c.a #9 ENSGT00940000160165.b #10 ENSGT00940000159675 #11 ENSGT00950000183179.b.b #12 ENSGT00950000183086.a.a.b.h.b #13 ENSGT01030000234629.C.a #14 ENSGT00940000154369.g.a #15 ENSGT00940000158995.b #16 ENSGT00940000163126.a.a #17 ENSGT00390000000051.b #18 ENSGT00940000154412.C.c.a #19 ENSGT01030000234515.a.b.b.b #20 ENSGT00940000156236.a.b #21 ENSGT00390000003574.b #22 ENSGT00940000154149.b.a.h #23 ENSGT00940000157757.g.b #24 ENSGT00930000151041 #26 ENSGT00530000063751.a.b #27 ENSGT00730000111014.o.a #28 ENSGT00390000012568 #29 ENSGT00500000044896 #30 ENSGT01050000244924.a.b.h #31 ENSGT00940000153649.A #32 ENSGT00940000153886.a.b #33 ENSGT00940000158863 #34 ENSGT00940000159497 #35 ENSGT00940000161095 #36 ENSGT00940000154882 #37 ENSGT01030000234618.B Oryzias_b ANCESTRAL SPECIES 8 ENSGT00940000157384.a ENSGT00940000159223.d #7 ENSGT00950000182903.a.a.d #8 ENSGT00900000141083.c.a #9 ENSGT00940000160165.b #10 ENSGT00940000159675 #11 ENSGT00950000183179.b.b #12 ENSGT00950000183086.a.a.b.h.b #13 ENSGT01030000234629.C.a #14 ENSGT00940000154369.g.a #15 ENSGT00940000158995.b #16 ENSGT00940000163126.a.a #17 ENSGT00390000000051.b #18 ENSGT01030000234515.a.b.b.b #20 ENSGT00940000156236.a.b #21 ENSGT00390000003574.b #22 ENSGT00940000154149.b.a.h #23 ENSGT00940000157757.g.b #24 ENSGT00930000151041 #26 ENSGT00530000063751.a.b #27 ENSGT00730000111014.o.a #28 ENSGT00390000012568 #29 ENSGT00500000044896 #30 ENSGT01050000244924.a.b.h #31 ENSGT00940000153649.A #32 ENSGT00940000153886.a.b #33 ENSGT00940000158863 #34 ENSGT00940000159497 #35 ENSGT00940000161095 #36 ENSGT00940000154882 #37 ENSGT01030000234618.B Indian medaka MODERN SPECIES 10 pcyt1aa (ENSOMEG00000018447) ap2m1a (ENSOMEG00000018414) #7 dvl3a (ENSOMEG00000018321) #8 copb2 (ENSOMEG00000018165) #9 rbp2b (ENSOMEG00000018095) #10 rbp1.1 (ENSOMEG00000018083) #11 NMNAT3 (ENSOMEG00000018039) #12 clstn2a (ENSOMEG00000017977) #13 spsb4a (ENSOMEG00000017906) #14 slc25a36a (ENSOMEG00000017859) #15 MARCHF2 (ENSOMEG00000017834) #16 rab11bb (ENSOMEG00000017806) #17 TIMM44 (ENSOMEG00000017767) #18 ENSOMEG00000017667 #20 PDC (ENSOMEG00000017603) #21 kifap3b (ENSOMEG00000017545) #22 ENSOMEG00000017421 #24 dusp12 (ENSOMEG00000017380) #26 ENSOMEG00000017301 prg4a (ENSOMEG00000017284) #27 ENSOMEG00000017267 #28 odr4 (ENSOMEG00000017193) #29 dpydb (ENSOMEG00000017058) #30 ptbp2b (ENSOMEG00000016950) #31 CHD7 (ENSOMEG00000016881) #32 rab2a (ENSOMEG00000016752) #33 ca8 (ENSOMEG00000016716) #34 tox (ENSOMEG00000016675) #35 ENSOMEG00000016646 #36 cryz (ENSOMEG00000016621) #37 DARS2 (ENSOMEG00000016596) Javanese ricefish MODERN SPECIES 8 pcyt1aa (ENSOJAG00000017391) ap2m1a (ENSOJAG00000017316) #7 dvl3a (ENSOJAG00000017146) #8 copb2 (ENSOJAG00000016214) #9 rbp2b (ENSOJAG00000016169) #10 rbp1.1 (ENSOJAG00000016154) #11 NMNAT3 (ENSOJAG00000016137) #12 clstn2a (ENSOJAG00000015617) #13 spsb4a (ENSOJAG00000015580) #14 slc25a36a (ENSOJAG00000015573) #15 MARCHF2 (ENSOJAG00000015558) #16 rab11bb (ENSOJAG00000015481) #17 TIMM44 (ENSOJAG00000014954) #18 ENSOJAG00000014871 #20 PDC (ENSOJAG00000014844) #21 kifap3b (ENSOJAG00000014522) #22 ENSOJAG00000014489 #23 OLFML2B (ENSOJAG00000014470) #24 dusp12 (ENSOJAG00000014454) #26 prg4a (ENSOJAG00000014427) #27 TPR (ENSOJAG00000011778) #28 odr4 (ENSOJAG00000011649) #29 ptbp2b (ENSOJAG00000009624) #31 rab2a (ENSOJAG00000022968) #33 ca8 (ENSOJAG00000022960) #34 tox (ENSOJAG00000022955) #35 ENSOJAG00000022952 #36 cryz (ENSOJAG00000022906) #37 DARS2 (ENSOJAG00000022820) bpnt2 (ENSOJAG00000022792) trnau1apb (ENSOJAG00000022787) Oryzias_a ANCESTRAL SPECIES 7 ENSGT00940000159223.d #7 ENSGT00950000182903.a.a.d #8 ENSGT00900000141083.c.a #9 ENSGT00940000160165.b #10 ENSGT00940000159675 #11 ENSGT00950000183179.b.b #12 ENSGT00950000183086.a.a.b.h.b #13 ENSGT01030000234629.C.a #14 ENSGT00940000154369.g.a #15 ENSGT00940000158995.b #16 ENSGT00940000163126.a.a #17 ENSGT00390000000051.b #18 ENSGT00940000154412.C.c.a #19 ENSGT01030000234515.a.b.b.b #20 ENSGT00940000156236.a.b #21 ENSGT00390000003574.b #22 ENSGT00940000154149.b.a.h #23 ENSGT00940000157757.g.b #24 ENSGT00930000151041 #26 ENSGT00530000063751.a.b #27 ENSGT00730000111014.o.a #28 ENSGT00390000012568 #29 ENSGT00500000044896 #30 ENSGT01050000244924.a.b.h #31 ENSGT00940000153649.A #32 ENSGT00940000153886.a.b #33 ENSGT00940000158863 #34 ENSGT00940000159497 #35 ENSGT00940000154882 #37 ENSGT01030000234618.B ENSGT00940000164879 Japanese Medaka HdrR MODERN SPECIES 8 ap2m1a (ENSORLG00000014164) #7 dvl3a (ENSORLG00000014122) #8 copb2 (ENSORLG00000014074) #9 rbp1.1 (ENSORLG00000014005) #11 rbp2b (ENSORLG00000028914) #10 clstn2a (ENSORLG00000022231) #13 ENSORLG00000026151 #12 spsb4a (ENSORLG00000013981) #14 slc25a36a (ENSORLG00000013978) #15 ENSORLG00000013951 #16 rab11bb (ENSORLG00000013938) #17 TIMM44 (ENSORLG00000013927) #18 ENSORLG00000026451 #19 ENSORLG00000013903 #20 pdca (ENSORLG00000013896) #21 kifap3b (ENSORLG00000013884) #22 ENSORLG00000024886 #23 ENSORLG00000013860 #24 dusp12 (ENSORLG00000013816) #26 prg4a (ENSORLG00000013785) #27 ENSORLG00000013763 #28 odr4 (ENSORLG00000013679) #29 dpydb (ENSORLG00000013626) #30 ptbp2b (ENSORLG00000013557) #31 CHD7 (ENSORLG00000013492) #32 rab2a (ENSORLG00000013432) #33 ca8 (ENSORLG00000013410) #34 tox (ENSORLG00000013382) #35 cryz (ENSORLG00000013362) #37 DARS2 (ENSORLG00000013328) bpnt2 (ENSORLG00000013302) Chinese medaka MODERN SPECIES 522 ap2m1a (ENSOSIG00000020528) #7 dvl3a (ENSOSIG00000020491) #8 copb2 (ENSOSIG00000020483) #9 rbp2b (ENSOSIG00000020472) #10 rbp1.1 (ENSOSIG00000020468) #11 NMNAT3 (ENSOSIG00000020465) #12 clstn2a (ENSOSIG00000017760) #13 spsb4a (ENSOSIG00000017585) #14 slc25a36a (ENSOSIG00000017582) #15 MARCHF2 (ENSOSIG00000017579) #16 rab11bb (ENSOSIG00000017577) #17 ENSOSIG00000017572 TIMM44 (ENSOSIG00000017570) #18 ENSOSIG00000017515 #20 PDC (ENSOSIG00000017506) #21 kifap3b (ENSOSIG00000017501) #22 ENSOSIG00000017499 #23 OLFML2B (ENSOSIG00000017493) #24 dusp12 (ENSOSIG00000017483) #26 prg4a (ENSOSIG00000017475) #27 TPR (ENSOSIG00000017181) #28 dpydb (ENSOSIG00000017085) #30 ptbp2b (ENSOSIG00000012898) #31 CHD7 (ENSOSIG00000012096) #32 rab2a (ENSOSIG00000012069) #33 ca8 (ENSOSIG00000012067) #34 ENSOSIG00000012066 ENSOSIG00000012065 cryz (ENSOSIG00000012019) #37 DARS2 (ENSOSIG00000010971) bpnt2 (ENSOSIG00000010968) Ovalentaria_B ANCESTRAL SPECIES 6 ENSGT00940000153304.C ENSGT00940000156181.B ENSGT00940000156304.c.b ENSGT00940000159203 ENSGT00940000164519.c.a ENSGT00940000155899.e.b ENSGT00940000156209.v.a ENSGT00530000063681.b.b ENSGT00940000156460.A ENSGT00390000000867 ENSGT00940000156470.u.b ENSGT00390000005318.a.a.b ENSGT00390000016559 ENSGT00940000159687 ENSGT00940000156236.a.b #21 ENSGT00390000003574.b #22 ENSGT00940000154149.b.a.h #23 ENSGT00940000157757.g.b #24 ENSGT00930000151041 #26 ENSGT00530000063751.a.b #27 ENSGT00730000111014.o.a #28 ENSGT00390000012568 #29 ENSGT00500000044896 #30 ENSGT01050000244924.a.b.h #31 ENSGT00940000153649.A #32 ENSGT00940000153886.a.b #33 ENSGT00940000158863 #34 ENSGT00940000159497 #35 ENSGT00940000161095 #36 ENSGT00940000154882 #37 ENSGT01030000234618.B Pomacentridae ANCESTRAL SPECIES 114 ENSGT00940000156460.A ENSGT00390000000867 ENSGT00940000156470.u.b ENSGT00390000005318.a.a.b ENSGT00390000016559 ENSGT00940000159687 ENSGT00940000156236.a.b #21 ENSGT00390000003574.b #22 ENSGT00940000154149.b.a.h #23 ENSGT00940000157757.g.b #24 ENSGT00930000151041 #26 ENSGT00530000063751.a.b #27 ENSGT00730000111014.o.a #28 ENSGT00390000012568 #29 ENSGT00500000044896 #30 ENSGT01050000244924.a.b.h #31 ENSGT00940000153649.A #32 ENSGT00940000153886.a.b #33 ENSGT00940000158863 #34 ENSGT00940000159497 #35 ENSGT00940000161095 #36 ENSGT00940000154882.g #37 ENSGT00940000154882.h #37 Pomacentridae_A ANCESTRAL SPECIES 122 ENSGT00940000156236.a.b #21 ENSGT00390000003574.b #22 ENSGT00940000154149.b.a.h #23 ENSGT00940000157757.g.b #24 ENSGT00930000151041 #26 ENSGT00530000063751.a.b #27 ENSGT00730000111014.o.a #28 ENSGT00390000012568 #29 ENSGT00500000044896 #30 ENSGT01050000244924.a.b.h #31 ENSGT00940000153649.A #32 ENSGT00940000153886.a.b #33 ENSGT00940000158863 #34 ENSGT00940000159497 #35 ENSGT00940000161095 #36 ENSGT00940000154882.g #37 ENSGT00940000154882.h.a #37 Amphiprion ANCESTRAL SPECIES 221 ENSGT00940000156236.a.b #21 ENSGT00390000003574.b #22 ENSGT00940000154149.b.a.h #23 ENSGT00940000157757.g.b #24 ENSGT00930000151041 #26 ENSGT00530000063751.a.b #27 ENSGT00730000111014.o.a #28 ENSGT00390000012568 #29 ENSGT00500000044896 #30 ENSGT01050000244924.a.b.h #31 ENSGT00940000153649.A #32 ENSGT00940000153886.a.b #33 ENSGT00940000158863 #34 ENSGT00940000159497 #35 ENSGT00940000161095 #36 ENSGT00940000154882.g #37 ENSGT00940000154882.h.a #37 Clown anemonefish MODERN SPECIES 902 kifap3b (ENSAOCG00000012428) #22 ENSAOCG00000012327 #23 OLFML2B (ENSAOCG00000012303) #24 Orange clownfish MODERN SPECIES 1 st6galnac3 (ENSAPEG00000011715) rabggtb (ENSAPEG00000011563) ENSAPEG00000011508 ENSAPEG00000011469 rps8a (ENSAPEG00000011451) hectd3 (ENSAPEG00000011358) BEST4 (ENSAPEG00000011320) ENSAPEG00000011308 rab36 (ENSAPEG00000011251) DEPDC5 (ENSAPEG00000011092) mfsd12a (ENSAPEG00000011021) csnk1g2a (ENSAPEG00000010965) mrpl37 (ENSAPEG00000010957) ACOT11 (ENSAPEG00000010881) PDC (ENSAPEG00000010872) #21 kifap3b (ENSAPEG00000010797) #22 ENSAPEG00000010784 #23 ENSAPEG00000010760 #24 dusp12 (ENSAPEG00000010728) #26 TPR (ENSAPEG00000010592) #28 odr4 (ENSAPEG00000010569) #29 dpydb (ENSAPEG00000010459) #30 ptbp2b (ENSAPEG00000010383) #31 CHD7 (ENSAPEG00000010332) #32 rab2a (ENSAPEG00000010294) #33 ca8 (ENSAPEG00000010277) #34 tox (ENSAPEG00000010263) #35 ENSAPEG00000010254 #36 cryz (ENSAPEG00000010220) #37 cryz (ENSAPEG00000010159) #37 ENSAPEG00000010104 Spiny chromis MODERN SPECIES 743 FBXO41 (ENSAPOG00000008297) smox (ENSAPOG00000008286) rnf24 (ENSAPOG00000008247) eloa (ENSAPOG00000008202) pithd1 (ENSAPOG00000008194) lypla2 (ENSAPOG00000008159) ENSAPOG00000008149 PDC (ENSAPOG00000008123) #21 kifap3b (ENSAPOG00000007985) #22 ENSAPOG00000007852 #23 OLFML2B (ENSAPOG00000007834) #24 Bicolor damselfish MODERN SPECIES 1691 ENSSPAG00000018002 mrpl37 (ENSSPAG00000018025) csnk1g2a (ENSSPAG00000018042) mfsd12a (ENSSPAG00000018084) DEPDC5 (ENSSPAG00000018118) rab36 (ENSSPAG00000018203) PDC (ENSSPAG00000018229) #21 kifap3b (ENSSPAG00000018254) #22 ENSSPAG00000018348 #23 OLFML2B (ENSSPAG00000018374) #24 Cichlidae ANCESTRAL SPECIES 2 ENSGT00940000153304.C ENSGT00940000156181.B ENSGT00940000156304.c.b ENSGT00940000159203 ENSGT00940000164519.c.a ENSGT00940000155899.e.b ENSGT00940000156209.v.a ENSGT00530000063681.b.b ENSGT00940000156460.A ENSGT00390000000867 ENSGT00940000156470.u.b ENSGT00390000005318.a.a.b ENSGT00390000016559 ENSGT00940000159687 ENSGT00940000156236.a.b #21 ENSGT00390000003574.b #22 ENSGT00940000154149.b.a.h #23 ENSGT00940000157757.g.b #24 ENSGT00930000151041 #26 ENSGT00530000063751.a.b #27 ENSGT00730000111014.o.a #28 ENSGT00390000012568 #29 ENSGT00500000044896 #30 ENSGT01050000244924.a.b.h #31 ENSGT00940000153649.A #32 ENSGT00940000153886.a.b #33 ENSGT00940000158863 #34 ENSGT00940000159497 #35 ENSGT00940000154882 #37 ENSGT01030000234618.B ENSGT00940000164879 Midas cichlid MODERN SPECIES 754 csnk1g2a (ENSACIG00000000477) mfsd12a (ENSACIG00000000513) DEPDC5 (ENSACIG00000000549) rab36 (ENSACIG00000000642) PDC (ENSACIG00000000781) #21 kifap3b (ENSACIG00000000909) #22 ENSACIG00000000951 #23 OLFML2B (ENSACIG00000000986) #24 dusp12 (ENSACIG00000001051) #26 prg4a (ENSACIG00000001078) #27 TPR (ENSACIG00000001159) #28 odr4 (ENSACIG00000001253) #29 dpydb (ENSACIG00000001318) #30 ptbp2b (ENSACIG00000001387) #31 CHD7 (ENSACIG00000001590) #32 rab2a (ENSACIG00000001706) #33 ca8 (ENSACIG00000001725) #34 tox (ENSACIG00000001734) #35 cryz (ENSACIG00000001754) #37 DARS2 (ENSACIG00000001777) bpnt2 (ENSACIG00000001817) Pseudocrenilabrinae ANCESTRAL SPECIES 47 ENSGT00390000003574.b #22 ENSGT00940000154149.b.a.h #23 ENSGT00940000157757.g.b #24 ENSGT00930000151041 #26 ENSGT00530000063751.a.b #27 ENSGT00730000111014.o.a #28 ENSGT00390000012568 #29 ENSGT00500000044896 #30 ENSGT01050000244924.a.b.h #31 ENSGT00940000153649.A #32 ENSGT00940000153886.a.b #33 ENSGT00940000158863 #34 ENSGT00940000159497 #35 ENSGT00940000154882 #37 ENSGT01030000234618.B ENSGT00940000164879 Pseudocrenilabrinae_A ANCESTRAL SPECIES 46 ENSGT00390000003574.b #22 ENSGT00940000154149.b.a.h #23 ENSGT00940000157757.g.b #24 ENSGT00930000151041 #26 ENSGT00530000063751.a.b #27 ENSGT00730000111014.o.a #28 ENSGT00390000012568 #29 ENSGT00500000044896 #30 ENSGT01050000244924.a.b.h #31 ENSGT00940000153649.A #32 ENSGT00940000153886.a.b #33 ENSGT00940000158863 #34 ENSGT00940000159497 #35 ENSGT00940000154882 #37 ENSGT01030000234618.B ENSGT00940000164879 Lyretail cichlid MODERN SPECIES 517 ENSNBRG00000001166 cryz (ENSNBRG00000001185) #37 tox (ENSNBRG00000001205) #35 ca8 (ENSNBRG00000001213) #34 rab2a (ENSNBRG00000001241) #33 CHD7 (ENSNBRG00000001280) #32 ptbp2b (ENSNBRG00000001492) #31 dpydb (ENSNBRG00000001729) #30 ENSNBRG00000001773 #30 odr4 (ENSNBRG00000001802) #29 ENSNBRG00000001944 #28 ENSNBRG00000002023 #28 prg4a (ENSNBRG00000002049) #27 kifap3b (ENSNBRG00000002126) #22 ENSNBRG00000002199 #24 dusp12 (ENSNBRG00000002213) #26 Haplochromini ANCESTRAL SPECIES 51 ENSGT00390000003574.b #22 ENSGT00940000154149.b.a.h #23 ENSGT00940000157757.g.b #24 ENSGT00930000151041 #26 ENSGT00530000063751.a.b #27 ENSGT00730000111014.o.a #28 ENSGT00390000012568 #29 ENSGT00500000044896 #30 ENSGT01050000244924.a.b.h #31 ENSGT00940000153649.A #32 ENSGT00940000153886.a.b #33 ENSGT00940000158863 #34 ENSGT00940000159497 #35 ENSGT00940000154882 #37 ENSGT01030000235305.b ENSGT00950000182841.a.o.b Burton s mouthbrooder MODERN SPECIES 1283 kifap3b (ENSHBUG00000004640) #22 ENSHBUG00000004568 #23 OLFML2B (ENSHBUG00000004532) #24 Haplochromini_A ANCESTRAL SPECIES 46 ENSGT00390000003574.b #22 ENSGT00940000154149.b.a.h #23 ENSGT00940000157757.g.b #24 ENSGT00930000151041 #26 ENSGT00530000063751.a.b #27 ENSGT00730000111014.o.a #28 ENSGT00390000012568 #29 ENSGT00500000044896 #30 ENSGT01050000244924.a.b.h #31 ENSGT00940000153649.A #32 ENSGT00940000153886.a.b #33 ENSGT00940000158863 #34 ENSGT00940000159497 #35 ENSGT00940000154882 #37 ENSGT00950000182841.a.o.b ENSGT01030000234618.B P. nyererei MODERN SPECIES 372 ENSPNYG00000013236 kifap3b (ENSPNYG00000013087) #22 ENSPNYG00000013060 #23 OLFML2B (ENSPNYG00000013033) #24 dusp12 (ENSPNYG00000013005) #26 prg4a (ENSPNYG00000012975) #27 TPR (ENSPNYG00000012808) #28 odr4 (ENSPNYG00000012767) #29 dpydb (ENSPNYG00000012672) #30 ptbp2b (ENSPNYG00000012610) #31 CHD7 (ENSPNYG00000012490) #32 rab2a (ENSPNYG00000012426) #33 ca8 (ENSPNYG00000012390) #34 tox (ENSPNYG00000012367) #35 cryz (ENSPNYG00000012297) #37 DARS2 (ENSPNYG00000012231) bpnt2 (ENSPNYG00000012191) Haplochromini_B ANCESTRAL SPECIES 51 ENSGT00390000003574.b #22 ENSGT00940000154149.b.a.h #23 ENSGT00940000157757.g.b #24 ENSGT00930000151041 #26 ENSGT00730000111014.o.a #28 ENSGT00390000012568 #29 ENSGT00500000044896 #30 ENSGT01050000244924.a.b.h #31 ENSGT00940000153649.A #32 ENSGT00940000153886.a.b #33 ENSGT00940000158863 #34 ENSGT00940000159497 #35 ENSGT00940000154882 #37 ENSGT00950000182841.a.o.b ENSGT01030000234618.B ENSGT00940000164879 Eastern happy MODERN SPECIES 9 xkr4 (ENSACLG00000000377) RNF31 (ENSACLG00000000533) ENSACLG00000000577 ENSACLG00000000583 dnajb6a (ENSACLG00000000589) exoc3 (ENSACLG00000000613) ENSACLG00000000678 ENSACLG00000000759 ENSACLG00000000832 rab3gap1 (ENSACLG00000000841) KIF1C (ENSACLG00000000871) ENSACLG00000001003 ENSACLG00000001034 ENSACLG00000001085 ENSACLG00000001091 kifap3b (ENSACLG00000001130) #22 ENSACLG00000001245 #23 ENSACLG00000001262 #24 dusp12 (ENSACLG00000001272) #26 TPR (ENSACLG00000001327) #28 odr4 (ENSACLG00000001637) #29 dpydb (ENSACLG00000001822) #30 ptbp2b (ENSACLG00000001885) #31 ENSACLG00000002269 ENSACLG00000002293 #32 rab2a (ENSACLG00000002599) #33 ca8 (ENSACLG00000002662) #34 tox (ENSACLG00000002718) #35 cryz (ENSACLG00000002758) #37 ENSACLG00000002797 DARS2 (ENSACLG00000002899) Zebra mbuna MODERN SPECIES 1100 ENSMZEG00005011138 mcm6 (ENSMZEG00005011109) si:ch73-71c20.5 (ENSMZEG00005011092) tmbim1a (ENSMZEG00005011084) ENSMZEG00005011051 catip (ENSMZEG00005011036) casp20 (ENSMZEG00005011021) ENSMZEG00005011006 ENSMZEG00005010998 catip (ENSMZEG00005010978) ENSMZEG00005010926 ENSMZEG00005010900 ENSMZEG00005010884 casp20 (ENSMZEG00005010871) ENSMZEG00005010865 kifap3b (ENSMZEG00005010840) #22 ENSMZEG00005010824 #23 ENSMZEG00005010815 #24 dusp12 (ENSMZEG00005010808) #26 TPR (ENSMZEG00005010788) #28 odr4 (ENSMZEG00005010748) #29 dpydb (ENSMZEG00005010698) #30 ptbp2b (ENSMZEG00005010677) #31 CHD7 (ENSMZEG00005010646) #32 rab2a (ENSMZEG00005010611) #33 ca8 (ENSMZEG00005010579) #34 tox (ENSMZEG00005010571) #35 cryz (ENSMZEG00005010551) #37 ENSMZEG00005010531 DARS2 (ENSMZEG00005010481) sugt1 (ENSMZEG00005010451) Nile tilapia MODERN SPECIES 9 penk (ENSONIG00000031930) ENSONIG00000027788 jph1b (ENSONIG00000006316) ENSONIG00000043147 blvra (ENSONIG00000006324) ENSONIG00000039789 ENSONIG00000024381 ENSONIG00000042802 ccr12a (ENSONIG00000020475) ENSONIG00000006330 ENSONIG00000037299 ENSONIG00000006339 tmem68 (ENSONIG00000006342) xkr4 (ENSONIG00000006346) ENSONIG00000006347 kifap3b (ENSONIG00000016566) #22 ENSONIG00000016571 #23 ENSONIG00000016576 #24 ENSONIG00000038331 dusp12 (ENSONIG00000016579) #26 prg4a (ENSONIG00000016584) #27 TPR (ENSONIG00000016590) #28 odr4 (ENSONIG00000016598) #29 dpydb (ENSONIG00000016599) #30 ptbp2b (ENSONIG00000016603) #31 CHD7 (ENSONIG00000016614) #32 rab2a (ENSONIG00000034587) #33 ca8 (ENSONIG00000016625) #34 tox (ENSONIG00000039081) #35 cryz (ENSONIG00000016629) #37 DARS2 (ENSONIG00000016633)