Clupeocephala	ANCESTRAL SPECIES	227				ENSGT00940000154667.b.a	ENSGT00940000157607	ENSGT00390000004674.i.b	ENSGT00390000004798	ENSGT00940000156132.h	ENSGT00940000164927.a	ENSGT00390000006876	ENSGT00940000156470.v.a	ENSGT00390000005318.a.a.b	ENSGT00950000183190.a.a.b.c.b	ENSGT00950000183190.a.a.a.b	ENSGT00940000159466	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000154149.b.a.g.a ##23	ENSGT00940000154499	ENSGT00390000012568 #29	ENSGT00730000111014.o.a #28	ENSGT00530000063751.a.b #27	ENSGT00940000161063	ENSGT00940000164633	ENSGT00940000160168.b.a	ENSGT00940000166054	ENSGT00940000166019	ENSGT01020000231030	ENSGT00930000151041 #26	ENSGT00940000159221	ENSGT00940000157757.g.a ##24
Euteleosteomorpha	ANCESTRAL SPECIES	343													ENSGT00390000006876	ENSGT00940000156470.v.a	ENSGT00390000005318.a.a.b	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000154149.b.a.g.a ##23	ENSGT00940000154499	ENSGT00390000012568 #29	ENSGT00730000111014.p ##28
Acanthomorphata	ANCESTRAL SPECIES	191															ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00940000154499	ENSGT00940000164640	ENSGT00390000012596.e	ENSGT00940000157704.a.a	ENSGT00940000157718.c	ENSGT00940000153304.C	ENSGT00940000156181.B	ENSGT01050000244924.a.b.h #31	ENSGT00530000063681.b.b
Euacanthomorphacea	ANCESTRAL SPECIES	4															ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00940000154499	ENSGT00940000164640	ENSGT00390000012596.e	ENSGT00940000157704.a.a	ENSGT00940000157718.c	ENSGT00940000158610.d	ENSGT00940000153141.B.a	ENSGT00390000018710	ENSGT01040000240400.c.a.b.a.a.d
Percomorphaceae	ANCESTRAL SPECIES	129															ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31
Percomorphaceae_B	ANCESTRAL SPECIES	8	ENSGT00940000153304.C	ENSGT00940000156181.B	ENSGT00940000156304.c.b	ENSGT00940000159203	ENSGT00940000164519.c.a	ENSGT00940000155899.e.b	ENSGT00940000156209.v.a	ENSGT00530000063681.b.b	ENSGT00940000156460.A	ENSGT00390000000867	ENSGT00940000156470.u.b	ENSGT00390000005318.a.a.b	ENSGT00390000016559	ENSGT00940000159687	ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000161095 #36	ENSGT00940000154882 #37	ENSGT01030000234618.B
Ovalentaria	ANCESTRAL SPECIES	5	ENSGT00940000153304.C	ENSGT00940000156181.B	ENSGT00940000156304.c.b	ENSGT00940000159203	ENSGT00940000164519.c.a	ENSGT00940000155899.e.b	ENSGT00940000156209.v.a	ENSGT00530000063681.b.b	ENSGT00940000156460.A	ENSGT00390000000867	ENSGT00940000156470.u.b	ENSGT00390000005318.a.a.b	ENSGT00390000016559	ENSGT00940000159687	ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000161095 #36	ENSGT00940000154882 #37	ENSGT01030000234618.B
Atherinomorphae	ANCESTRAL SPECIES	4	ENSGT00940000159223.d #7	ENSGT00950000182903.a.a.d #8	ENSGT00900000141083.c.a #9	ENSGT00940000160165.b #10	ENSGT00940000159675 #11	ENSGT00950000183179.b.b #12	ENSGT00950000183086.a.a.b.h.b #13	ENSGT01030000234629.C.a #14	ENSGT00940000154369.g.a #15	ENSGT00940000158995.b #16	ENSGT00940000163126.a.a #17	ENSGT00390000000051.b #18	ENSGT00940000154412.C.c.a #19	ENSGT01030000234515.a.b.b.b #20	ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000161095 #36	ENSGT00940000154882 #37	ENSGT01030000234618.B
Cyprinodontiformes	ANCESTRAL SPECIES	5	ENSGT00940000159223.d #7	ENSGT00950000182903.a.a.d #8	ENSGT00900000141083.c.a #9	ENSGT00940000160165.b #10	ENSGT00940000159675 #11	ENSGT00950000183179.b.b #12	ENSGT00950000183086.a.a.b.h.b #13	ENSGT01030000234629.C.a #14	ENSGT00940000154369.g.a #15	ENSGT00940000158995.b #16	ENSGT00940000163126.a.a #17	ENSGT00390000000051.b #18	ENSGT00940000154412.C.c.a #19	ENSGT01030000234515.a.b.b.b #20	ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00940000154395.a.a.a.b.a #25	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000161095 #36	ENSGT00940000154882 #37
Aplocheiloidei	ANCESTRAL SPECIES	19	ENSGT00940000159223.d #7	ENSGT00950000182903.a.a.d #8	ENSGT00900000141083.c.a #9	ENSGT00940000160165.b #10	ENSGT00940000159675 #11	ENSGT00950000183179.b.b #12	ENSGT00950000183086.a.a.b.h.b #13	ENSGT01030000234629.C.a #14	ENSGT00940000154369.g.a #15	ENSGT00940000158995.b #16	ENSGT00940000163126.a.a #17	ENSGT00390000000051.b #18	ENSGT00940000154412.C.c.a #19	ENSGT01030000234515.a.b.b.b #20	ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00940000154395.a.a.a.b.a #25	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000154882 #37	ENSGT01030000234618.B
Mangrove rivulus	MODERN SPECIES	64	dvl3a (ENSKMAG00000008628) #8	copb2 (ENSKMAG00000008663) #9	rbp2b (ENSKMAG00000008760) #10	rbp1.1 (ENSKMAG00000008788) #11	NMNAT3 (ENSKMAG00000008800) #12	clstn2a (ENSKMAG00000008838) #13	spsb4a (ENSKMAG00000008932) #14	slc25a36a (ENSKMAG00000008956) #15	MARCHF2 (ENSKMAG00000009002) #16	rab11bb (ENSKMAG00000009033) #17	TIMM44 (ENSKMAG00000009060) #18	CTXN1 (ENSKMAG00000009121) #19	CERS4 (ENSKMAG00000009138) #20	ENSKMAG00000009157	PDC (ENSKMAG00000009178) #21	kifap3b (ENSKMAG00000009197) #22	ENSKMAG00000009283	ENSKMAG00000009312 #23	OLFML2B (ENSKMAG00000009333) #24	ENSKMAG00000009357 #25	dusp12 (ENSKMAG00000009384) #26	TPR (ENSKMAG00000009412) #28	odr4 (ENSKMAG00000009510) #29	dpydb (ENSKMAG00000009544) #30	ptbp2b (ENSKMAG00000009644) #31	CHD7 (ENSKMAG00000009724) #32	rab2a (ENSKMAG00000009799) #33	ca8 (ENSKMAG00000009850) #34	tox (ENSKMAG00000009900) #35	cryz (ENSKMAG00000009924) #37	DARS2 (ENSKMAG00000009973)
Turquoise killifish	MODERN SPECIES	1618	ENSNFUG00015017891	dvl3a (ENSNFUG00015017928) #8	COPB2 (ENSNFUG00015018238) #9	rbp2b (ENSNFUG00015019621) #10	NMNAT3 (ENSNFUG00015019671) #11	NMNAT3 (ENSNFUG00015019677) #12	clstn2a (ENSNFUG00015019721) #13	SPSB4 (ENSNFUG00015020062) #14	slc25a36a (ENSNFUG00015020070) #15	MARCH2 (ENSNFUG00015020081) #16	Nfu_g_1_020481 (ENSNFUG00015020092) #17	TIMM44 (ENSNFUG00015020126) #18	CTXN1 (ENSNFUG00015020167) #19	CERS4 (ENSNFUG00015020174) #20	OLPD-R (ENSNFUG00015020202) #21	KIFAP3B (ENSNFUG00015020250) #22	ENSNFUG00015021367 #23	OLFML2BB (ENSNFUG00015021376) #24	dusp12 (ENSNFUG00015021389) #26	prg4a (ENSNFUG00015021413) #27	TPRA (ENSNFUG00015021506) #28	C2H1ORF27 (ENSNFUG00015023001) #29	dpydb (ENSNFUG00015023011) #30	PTBP2B (ENSNFUG00015023143) #31	CHD7 (ENSNFUG00015023198) #32	ENSNFUG00015023291	RAB2A (ENSNFUG00015023295) #33	ENSNFUG00015023305	CA8 (ENSNFUG00015023308) #34	ENSNFUG00015023317	TOX (ENSNFUG00015023320) #35
Cyprinodontoidei	ANCESTRAL SPECIES	2	ENSGT00940000157384.a	ENSGT00940000159223.d #7	ENSGT00950000182903.a.a.d #8	ENSGT00900000141083.c.a #9	ENSGT00940000159675 #11	ENSGT00950000183179.b.b #12	ENSGT00950000183086.a.a.b.h.b #13	ENSGT01030000234629.C.a #14	ENSGT00940000154369.g.a #15	ENSGT00940000158995.b #16	ENSGT00940000163126.a.a #17	ENSGT00390000000051.b #18	ENSGT00940000154412.C.c.a #19	ENSGT01030000234515.a.b.b.b #20	ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00940000154395.a.a.a.b.a #25	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000161095.hb #36	ENSGT00940000154882 #37
Poeciliinae	ANCESTRAL SPECIES	6	ENSGT00940000157384.a	ENSGT00940000159223.d #7	ENSGT00950000182903.a.a.d #8	ENSGT00900000141083.c.a #9	ENSGT00940000159675 #11	ENSGT00950000183179.b.b #12	ENSGT00950000183086.a.a.b.h.b #13	ENSGT01030000234629.C.a #14	ENSGT00940000154369.g.a #15	ENSGT00940000158995.b #16	ENSGT00940000163126.a.a #17	ENSGT00390000000051.b #18	ENSGT00940000154412.C.c.a #19	ENSGT01030000234515.a.b.b.b #20	ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00940000154395.a.a.a.b.a #25	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000161095.hb #36	ENSGT00940000154882 #37
Poecilia	ANCESTRAL SPECIES	19	ENSGT00940000157384.a	ENSGT00940000159223.d #7	ENSGT00950000182903.a.a.d #8	ENSGT00900000141083.c.a #9	ENSGT00940000159675 #11	ENSGT00950000183179.b.b #12	ENSGT00950000183086.a.a.b.h.b #13	ENSGT01030000234629.C.a #14	ENSGT00940000154369.g.a #15	ENSGT00940000158995.b #16	ENSGT00940000163126.a.a #17	ENSGT00390000000051.b #18	ENSGT00940000154412.C.c.a #19	ENSGT01030000234515.a.b.b.b #20	ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00940000154395.a.a.a.b.a #25	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000161095.hb #36	ENSGT00940000154882 #37
NAME_6	ANCESTRAL SPECIES	204															ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00940000154395.a.a.a.b.a #25	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000161095.hb #36	ENSGT00940000154882 #37
Amazon molly	MODERN SPECIES	422	dpydb (ENSPFOG00000005785) #30	ptbp2b (ENSPFOG00000005646) #31	CHD7 (ENSPFOG00000004891) #32	rab2a (ENSPFOG00000004786) #33	ca8 (ENSPFOG00000004700) #34	tox (ENSPFOG00000004558) #35	ENSPFOG00000004532 #36	cryz (ENSPFOG00000004423) #37	DARS2 (ENSPFOG00000004144)	bpnt2 (ENSPFOG00000004054)	ENSPFOG00000004047	trnau1apb (ENSPFOG00000003938)	fitm1l (ENSPFOG00000003918)	ENSPFOG00000022209	PDC (ENSPFOG00000003868) #21	kifap3b (ENSPFOG00000003506) #22	ENSPFOG00000024715 #23	myh7 (ENSPFOG00000003432)	myh7 (ENSPFOG00000002250)	ENSPFOG00000022911	lhx8a (ENSPFOG00000002129)	klhl20 (ENSPFOG00000001873)	inhbb (ENSPFOG00000001729)
Sailfin molly	MODERN SPECIES	2949															PDC (ENSPLAG00000016820) #21	kifap3b (ENSPLAG00000016880) #22	ENSPLAG00000016894 #23	OLFML2B (ENSPLAG00000016911) #24
Guppy	MODERN SPECIES	447	dvl3a (ENSPREG00000014078) #8	ENSPREG00000014095 #8	copb2 (ENSPREG00000014106) #9	rbp1.1 (ENSPREG00000014144) #11	NMNAT3 (ENSPREG00000014156) #12	clstn2a (ENSPREG00000014196) #13	spsb4a (ENSPREG00000014221) #14	ENSPREG00000014238 ##15	ENSPREG00000014251 ##15	MARCHF2 (ENSPREG00000014259) #16	rab11bb (ENSPREG00000014269) #17	TIMM44 (ENSPREG00000014295) #18	CTXN1 (ENSPREG00000014346) #19	ENSPREG00000014369 #20	PDC (ENSPREG00000014388) #21	kifap3b (ENSPREG00000014417) #22	ENSPREG00000014481 #23	ENSPREG00000014488 #23	OLFML2B (ENSPREG00000014496) #24	dusp12 (ENSPREG00000014521) #26	prg4a (ENSPREG00000014538) #27	ENSPREG00000014558 #28	ENSPREG00000014589 #28	odr4 (ENSPREG00000014667) #29	dpydb (ENSPREG00000014688) #30	ptbp2b (ENSPREG00000014711) #31	CHD7 (ENSPREG00000014744) #32	ENSPREG00000014865	ENSPREG00000014870	rab2a (ENSPREG00000014888) #33	ca8 (ENSPREG00000014912) #34
Platyfish	MODERN SPECIES	20	pcyt1aa (ENSXMAG00000019014)	ap2m1a (ENSXMAG00000019001) #7	dvl3a (ENSXMAG00000018981) #8	copb2 (ENSXMAG00000018937) #9	rbp1.1 (ENSXMAG00000018933) #11	NMNAT3 (ENSXMAG00000018929) #12	clstn2a (ENSXMAG00000018890) #13	spsb4a (ENSXMAG00000018887) #14	slc25a36a (ENSXMAG00000018866) #15	MARCHF2 (ENSXMAG00000018861) #16	rab11bb (ENSXMAG00000011926) #17	TIMM44 (ENSXMAG00000018819) #18	CTXN1 (ENSXMAG00000026623) #19	ENSXMAG00000018778 #20	PDC (ENSXMAG00000018762) #21	kifap3b (ENSXMAG00000018739) #22	ENSXMAG00000026629 #23	OLFML2B (ENSXMAG00000018729) #24	ENSXMAG00000027606	dusp12 (ENSXMAG00000018722) #26	prg4a (ENSXMAG00000018717) #27	TPR (ENSXMAG00000018684) #28	odr4 (ENSXMAG00000018668) #29	dpydb (ENSXMAG00000018645) #30	ptbp2b (ENSXMAG00000018642) #31	CHD7 (ENSXMAG00000018590) #32	rab2a (ENSXMAG00000024267) #33	ca8 (ENSXMAG00000018565) #34	tox (ENSXMAG00000018560) #35	ENSXMAG00000024775	cryz (ENSXMAG00000018549) #37
NAME_4	ANCESTRAL SPECIES	9	ENSGT00940000157384.a	ENSGT00940000159223.d #7	ENSGT00950000182903.a.a.d #8	ENSGT00900000141083.c.a #9	ENSGT00940000159675 #11	ENSGT00950000183179.b.b #12	ENSGT00950000183086.a.a.b.h.b #13	ENSGT01030000234629.C.a #14	ENSGT00940000154369.g.a #15	ENSGT00940000158995.b #16	ENSGT00940000163126.a.a #17	ENSGT00390000000051.b #18	ENSGT00940000154412.C.c.a #19	ENSGT01030000234515.a.b.b.b #20	ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000154882 #37	ENSGT01030000234618.B	ENSGT00940000164879
Mummichog	MODERN SPECIES	2508															PDC (ENSFHEG00000001461) #21	kifap3b (ENSFHEG00000001453) #22	ENSFHEG00000001441 #23	OLFML2B (ENSFHEG00000001437) #24	dusp12 (ENSFHEG00000001434) #26	prg4a (ENSFHEG00000001429) #27	TPR (ENSFHEG00000001411) #28	odr4 (ENSFHEG00000001356) #29	dpydb (ENSFHEG00000001338) #30	ptbp2b (ENSFHEG00000001320) #31	CHD7 (ENSFHEG00000001311) #32	rab2a (ENSFHEG00000001296) #33	ca8 (ENSFHEG00000001294) #34	tox (ENSFHEG00000001293) #35	cryz (ENSFHEG00000001290) #37	DARS2 (ENSFHEG00000001285)	bpnt2 (ENSFHEG00000001277)
Sheepshead minnow	MODERN SPECIES	336						ENSCVAG00000016794 #12	clstn2a (ENSCVAG00000016907) #13	spsb4a (ENSCVAG00000016921) #14	ENSCVAG00000016936	slc25a36a (ENSCVAG00000016985) #15	MARCHF2 (ENSCVAG00000016997) #16	rab11bb (ENSCVAG00000017021) #17	TIMM44 (ENSCVAG00000017060) #18	ENSCVAG00000017123 #20	PDC (ENSCVAG00000017136) #21	kifap3b (ENSCVAG00000017254) #22	ENSCVAG00000017271 #23	OLFML2B (ENSCVAG00000017284) #24	dusp12 (ENSCVAG00000017311) #26	TPR (ENSCVAG00000017444) #28	odr4 (ENSCVAG00000017457) #29	dpydb (ENSCVAG00000017559) #30	ptbp2b (ENSCVAG00000017566) #31	CHD7 (ENSCVAG00000017584) #32	rab2a (ENSCVAG00000017623) #33	ca8 (ENSCVAG00000017645) #34	tox (ENSCVAG00000000458) #35	cryz (ENSCVAG00000017754) #37	DARS2 (ENSCVAG00000017840)	bpnt2 (ENSCVAG00000017851)	trnau1apb (ENSCVAG00000017866)
Oryzias	ANCESTRAL SPECIES	12	ENSGT00940000159223.d #7	ENSGT00950000182903.a.a.d #8	ENSGT00900000141083.c.a #9	ENSGT00940000160165.b #10	ENSGT00940000159675 #11	ENSGT00950000183179.b.b #12	ENSGT00950000183086.a.a.b.h.b #13	ENSGT01030000234629.C.a #14	ENSGT00940000154369.g.a #15	ENSGT00940000158995.b #16	ENSGT00940000163126.a.a #17	ENSGT00390000000051.b #18	ENSGT00940000154412.C.c.a #19	ENSGT01030000234515.a.b.b.b #20	ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000161095 #36	ENSGT00940000154882 #37	ENSGT01030000234618.B
Oryzias_b	ANCESTRAL SPECIES	8	ENSGT00940000157384.a	ENSGT00940000159223.d #7	ENSGT00950000182903.a.a.d #8	ENSGT00900000141083.c.a #9	ENSGT00940000160165.b #10	ENSGT00940000159675 #11	ENSGT00950000183179.b.b #12	ENSGT00950000183086.a.a.b.h.b #13	ENSGT01030000234629.C.a #14	ENSGT00940000154369.g.a #15	ENSGT00940000158995.b #16	ENSGT00940000163126.a.a #17	ENSGT00390000000051.b #18	ENSGT01030000234515.a.b.b.b #20	ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000161095 #36	ENSGT00940000154882 #37	ENSGT01030000234618.B
Indian medaka	MODERN SPECIES	10	pcyt1aa (ENSOMEG00000018447)	ap2m1a (ENSOMEG00000018414) #7	dvl3a (ENSOMEG00000018321) #8	copb2 (ENSOMEG00000018165) #9	rbp2b (ENSOMEG00000018095) #10	rbp1.1 (ENSOMEG00000018083) #11	NMNAT3 (ENSOMEG00000018039) #12	clstn2a (ENSOMEG00000017977) #13	spsb4a (ENSOMEG00000017906) #14	slc25a36a (ENSOMEG00000017859) #15	MARCHF2 (ENSOMEG00000017834) #16	rab11bb (ENSOMEG00000017806) #17	TIMM44 (ENSOMEG00000017767) #18	ENSOMEG00000017667 #20	PDC (ENSOMEG00000017603) #21	kifap3b (ENSOMEG00000017545) #22	ENSOMEG00000017421 #24	dusp12 (ENSOMEG00000017380) #26	ENSOMEG00000017301	prg4a (ENSOMEG00000017284) #27	ENSOMEG00000017267 #28	odr4 (ENSOMEG00000017193) #29	dpydb (ENSOMEG00000017058) #30	ptbp2b (ENSOMEG00000016950) #31	CHD7 (ENSOMEG00000016881) #32	rab2a (ENSOMEG00000016752) #33	ca8 (ENSOMEG00000016716) #34	tox (ENSOMEG00000016675) #35	ENSOMEG00000016646 #36	cryz (ENSOMEG00000016621) #37	DARS2 (ENSOMEG00000016596)
Javanese ricefish	MODERN SPECIES	8	pcyt1aa (ENSOJAG00000017391)	ap2m1a (ENSOJAG00000017316) #7	dvl3a (ENSOJAG00000017146) #8	copb2 (ENSOJAG00000016214) #9	rbp2b (ENSOJAG00000016169) #10	rbp1.1 (ENSOJAG00000016154) #11	NMNAT3 (ENSOJAG00000016137) #12	clstn2a (ENSOJAG00000015617) #13	spsb4a (ENSOJAG00000015580) #14	slc25a36a (ENSOJAG00000015573) #15	MARCHF2 (ENSOJAG00000015558) #16	rab11bb (ENSOJAG00000015481) #17	TIMM44 (ENSOJAG00000014954) #18	ENSOJAG00000014871 #20	PDC (ENSOJAG00000014844) #21	kifap3b (ENSOJAG00000014522) #22	ENSOJAG00000014489 #23	OLFML2B (ENSOJAG00000014470) #24	dusp12 (ENSOJAG00000014454) #26	prg4a (ENSOJAG00000014427) #27	TPR (ENSOJAG00000011778) #28	odr4 (ENSOJAG00000011649) #29	ptbp2b (ENSOJAG00000009624) #31	rab2a (ENSOJAG00000022968) #33	ca8 (ENSOJAG00000022960) #34	tox (ENSOJAG00000022955) #35	ENSOJAG00000022952 #36	cryz (ENSOJAG00000022906) #37	DARS2 (ENSOJAG00000022820)	bpnt2 (ENSOJAG00000022792)	trnau1apb (ENSOJAG00000022787)
Oryzias_a	ANCESTRAL SPECIES	7	ENSGT00940000159223.d #7	ENSGT00950000182903.a.a.d #8	ENSGT00900000141083.c.a #9	ENSGT00940000160165.b #10	ENSGT00940000159675 #11	ENSGT00950000183179.b.b #12	ENSGT00950000183086.a.a.b.h.b #13	ENSGT01030000234629.C.a #14	ENSGT00940000154369.g.a #15	ENSGT00940000158995.b #16	ENSGT00940000163126.a.a #17	ENSGT00390000000051.b #18	ENSGT00940000154412.C.c.a #19	ENSGT01030000234515.a.b.b.b #20	ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000154882 #37	ENSGT01030000234618.B	ENSGT00940000164879
Japanese Medaka HdrR	MODERN SPECIES	8	ap2m1a (ENSORLG00000014164) #7	dvl3a (ENSORLG00000014122) #8	copb2 (ENSORLG00000014074) #9	rbp1.1 (ENSORLG00000014005) #11	rbp2b (ENSORLG00000028914) #10	clstn2a (ENSORLG00000022231) #13	ENSORLG00000026151 #12	spsb4a (ENSORLG00000013981) #14	slc25a36a (ENSORLG00000013978) #15	ENSORLG00000013951 #16	rab11bb (ENSORLG00000013938) #17	TIMM44 (ENSORLG00000013927) #18	ENSORLG00000026451 #19	ENSORLG00000013903 #20	pdca (ENSORLG00000013896) #21	kifap3b (ENSORLG00000013884) #22	ENSORLG00000024886 #23	ENSORLG00000013860 #24	dusp12 (ENSORLG00000013816) #26	prg4a (ENSORLG00000013785) #27	ENSORLG00000013763 #28	odr4 (ENSORLG00000013679) #29	dpydb (ENSORLG00000013626) #30	ptbp2b (ENSORLG00000013557) #31	CHD7 (ENSORLG00000013492) #32	rab2a (ENSORLG00000013432) #33	ca8 (ENSORLG00000013410) #34	tox (ENSORLG00000013382) #35	cryz (ENSORLG00000013362) #37	DARS2 (ENSORLG00000013328)	bpnt2 (ENSORLG00000013302)
Chinese medaka	MODERN SPECIES	522	ap2m1a (ENSOSIG00000020528) #7	dvl3a (ENSOSIG00000020491) #8	copb2 (ENSOSIG00000020483) #9	rbp2b (ENSOSIG00000020472) #10	rbp1.1 (ENSOSIG00000020468) #11	NMNAT3 (ENSOSIG00000020465) #12	clstn2a (ENSOSIG00000017760) #13	spsb4a (ENSOSIG00000017585) #14	slc25a36a (ENSOSIG00000017582) #15	MARCHF2 (ENSOSIG00000017579) #16	rab11bb (ENSOSIG00000017577) #17	ENSOSIG00000017572	TIMM44 (ENSOSIG00000017570) #18	ENSOSIG00000017515 #20	PDC (ENSOSIG00000017506) #21	kifap3b (ENSOSIG00000017501) #22	ENSOSIG00000017499 #23	OLFML2B (ENSOSIG00000017493) #24	dusp12 (ENSOSIG00000017483) #26	prg4a (ENSOSIG00000017475) #27	TPR (ENSOSIG00000017181) #28	dpydb (ENSOSIG00000017085) #30	ptbp2b (ENSOSIG00000012898) #31	CHD7 (ENSOSIG00000012096) #32	rab2a (ENSOSIG00000012069) #33	ca8 (ENSOSIG00000012067) #34	ENSOSIG00000012066	ENSOSIG00000012065	cryz (ENSOSIG00000012019) #37	DARS2 (ENSOSIG00000010971)	bpnt2 (ENSOSIG00000010968)
Ovalentaria_B	ANCESTRAL SPECIES	6	ENSGT00940000153304.C	ENSGT00940000156181.B	ENSGT00940000156304.c.b	ENSGT00940000159203	ENSGT00940000164519.c.a	ENSGT00940000155899.e.b	ENSGT00940000156209.v.a	ENSGT00530000063681.b.b	ENSGT00940000156460.A	ENSGT00390000000867	ENSGT00940000156470.u.b	ENSGT00390000005318.a.a.b	ENSGT00390000016559	ENSGT00940000159687	ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000161095 #36	ENSGT00940000154882 #37	ENSGT01030000234618.B
Pomacentridae	ANCESTRAL SPECIES	114									ENSGT00940000156460.A	ENSGT00390000000867	ENSGT00940000156470.u.b	ENSGT00390000005318.a.a.b	ENSGT00390000016559	ENSGT00940000159687	ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000161095 #36	ENSGT00940000154882.g #37	ENSGT00940000154882.h #37
Pomacentridae_A	ANCESTRAL SPECIES	122															ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000161095 #36	ENSGT00940000154882.g #37	ENSGT00940000154882.h.a #37
Amphiprion	ANCESTRAL SPECIES	221															ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000161095 #36	ENSGT00940000154882.g #37	ENSGT00940000154882.h.a #37
Clown anemonefish	MODERN SPECIES	902																kifap3b (ENSAOCG00000012428) #22	ENSAOCG00000012327 #23	OLFML2B (ENSAOCG00000012303) #24
Orange clownfish	MODERN SPECIES	1	st6galnac3 (ENSAPEG00000011715)	rabggtb (ENSAPEG00000011563)	ENSAPEG00000011508	ENSAPEG00000011469	rps8a (ENSAPEG00000011451)	hectd3 (ENSAPEG00000011358)	BEST4 (ENSAPEG00000011320)	ENSAPEG00000011308	rab36 (ENSAPEG00000011251)	DEPDC5 (ENSAPEG00000011092)	mfsd12a (ENSAPEG00000011021)	csnk1g2a (ENSAPEG00000010965)	mrpl37 (ENSAPEG00000010957)	ACOT11 (ENSAPEG00000010881)	PDC (ENSAPEG00000010872) #21	kifap3b (ENSAPEG00000010797) #22	ENSAPEG00000010784 #23	ENSAPEG00000010760 #24	dusp12 (ENSAPEG00000010728) #26	TPR (ENSAPEG00000010592) #28	odr4 (ENSAPEG00000010569) #29	dpydb (ENSAPEG00000010459) #30	ptbp2b (ENSAPEG00000010383) #31	CHD7 (ENSAPEG00000010332) #32	rab2a (ENSAPEG00000010294) #33	ca8 (ENSAPEG00000010277) #34	tox (ENSAPEG00000010263) #35	ENSAPEG00000010254 #36	cryz (ENSAPEG00000010220) #37	cryz (ENSAPEG00000010159) #37	ENSAPEG00000010104
Spiny chromis	MODERN SPECIES	743								FBXO41 (ENSAPOG00000008297)	smox (ENSAPOG00000008286)	rnf24 (ENSAPOG00000008247)	eloa (ENSAPOG00000008202)	pithd1 (ENSAPOG00000008194)	lypla2 (ENSAPOG00000008159)	ENSAPOG00000008149	PDC (ENSAPOG00000008123) #21	kifap3b (ENSAPOG00000007985) #22	ENSAPOG00000007852 #23	OLFML2B (ENSAPOG00000007834) #24
Bicolor damselfish	MODERN SPECIES	1691									ENSSPAG00000018002	mrpl37 (ENSSPAG00000018025)	csnk1g2a (ENSSPAG00000018042)	mfsd12a (ENSSPAG00000018084)	DEPDC5 (ENSSPAG00000018118)	rab36 (ENSSPAG00000018203)	PDC (ENSSPAG00000018229) #21	kifap3b (ENSSPAG00000018254) #22	ENSSPAG00000018348 #23	OLFML2B (ENSSPAG00000018374) #24
Cichlidae	ANCESTRAL SPECIES	2	ENSGT00940000153304.C	ENSGT00940000156181.B	ENSGT00940000156304.c.b	ENSGT00940000159203	ENSGT00940000164519.c.a	ENSGT00940000155899.e.b	ENSGT00940000156209.v.a	ENSGT00530000063681.b.b	ENSGT00940000156460.A	ENSGT00390000000867	ENSGT00940000156470.u.b	ENSGT00390000005318.a.a.b	ENSGT00390000016559	ENSGT00940000159687	ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000154882 #37	ENSGT01030000234618.B	ENSGT00940000164879
Midas cichlid	MODERN SPECIES	754											csnk1g2a (ENSACIG00000000477)	mfsd12a (ENSACIG00000000513)	DEPDC5 (ENSACIG00000000549)	rab36 (ENSACIG00000000642)	PDC (ENSACIG00000000781) #21	kifap3b (ENSACIG00000000909) #22	ENSACIG00000000951 #23	OLFML2B (ENSACIG00000000986) #24	dusp12 (ENSACIG00000001051) #26	prg4a (ENSACIG00000001078) #27	TPR (ENSACIG00000001159) #28	odr4 (ENSACIG00000001253) #29	dpydb (ENSACIG00000001318) #30	ptbp2b (ENSACIG00000001387) #31	CHD7 (ENSACIG00000001590) #32	rab2a (ENSACIG00000001706) #33	ca8 (ENSACIG00000001725) #34	tox (ENSACIG00000001734) #35	cryz (ENSACIG00000001754) #37	DARS2 (ENSACIG00000001777)	bpnt2 (ENSACIG00000001817)
Pseudocrenilabrinae	ANCESTRAL SPECIES	47																ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000154882 #37	ENSGT01030000234618.B	ENSGT00940000164879
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	46																ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000154882 #37	ENSGT01030000234618.B	ENSGT00940000164879
Lyretail cichlid	MODERN SPECIES	517			ENSNBRG00000001166	cryz (ENSNBRG00000001185) #37	tox (ENSNBRG00000001205) #35	ca8 (ENSNBRG00000001213) #34	rab2a (ENSNBRG00000001241) #33	CHD7 (ENSNBRG00000001280) #32	ptbp2b (ENSNBRG00000001492) #31	dpydb (ENSNBRG00000001729) #30	ENSNBRG00000001773 #30	odr4 (ENSNBRG00000001802) #29	ENSNBRG00000001944 #28	ENSNBRG00000002023 #28	prg4a (ENSNBRG00000002049) #27	kifap3b (ENSNBRG00000002126) #22	ENSNBRG00000002199 #24	dusp12 (ENSNBRG00000002213) #26
Haplochromini	ANCESTRAL SPECIES	51																ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000154882 #37	ENSGT01030000235305.b	ENSGT00950000182841.a.o.b
Burton s mouthbrooder	MODERN SPECIES	1283																kifap3b (ENSHBUG00000004640) #22	ENSHBUG00000004568 #23	OLFML2B (ENSHBUG00000004532) #24
Haplochromini_A	ANCESTRAL SPECIES	46																ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000154882 #37	ENSGT00950000182841.a.o.b	ENSGT01030000234618.B
P. nyererei	MODERN SPECIES	372															ENSPNYG00000013236	kifap3b (ENSPNYG00000013087) #22	ENSPNYG00000013060 #23	OLFML2B (ENSPNYG00000013033) #24	dusp12 (ENSPNYG00000013005) #26	prg4a (ENSPNYG00000012975) #27	TPR (ENSPNYG00000012808) #28	odr4 (ENSPNYG00000012767) #29	dpydb (ENSPNYG00000012672) #30	ptbp2b (ENSPNYG00000012610) #31	CHD7 (ENSPNYG00000012490) #32	rab2a (ENSPNYG00000012426) #33	ca8 (ENSPNYG00000012390) #34	tox (ENSPNYG00000012367) #35	cryz (ENSPNYG00000012297) #37	DARS2 (ENSPNYG00000012231)	bpnt2 (ENSPNYG00000012191)
Haplochromini_B	ANCESTRAL SPECIES	51																ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000154882 #37	ENSGT00950000182841.a.o.b	ENSGT01030000234618.B	ENSGT00940000164879
Eastern happy	MODERN SPECIES	9	xkr4 (ENSACLG00000000377)	RNF31 (ENSACLG00000000533)	ENSACLG00000000577	ENSACLG00000000583	dnajb6a (ENSACLG00000000589)	exoc3 (ENSACLG00000000613)	ENSACLG00000000678	ENSACLG00000000759	ENSACLG00000000832	rab3gap1 (ENSACLG00000000841)	KIF1C (ENSACLG00000000871)	ENSACLG00000001003	ENSACLG00000001034	ENSACLG00000001085	ENSACLG00000001091	kifap3b (ENSACLG00000001130) #22	ENSACLG00000001245 #23	ENSACLG00000001262 #24	dusp12 (ENSACLG00000001272) #26	TPR (ENSACLG00000001327) #28	odr4 (ENSACLG00000001637) #29	dpydb (ENSACLG00000001822) #30	ptbp2b (ENSACLG00000001885) #31	ENSACLG00000002269	ENSACLG00000002293 #32	rab2a (ENSACLG00000002599) #33	ca8 (ENSACLG00000002662) #34	tox (ENSACLG00000002718) #35	cryz (ENSACLG00000002758) #37	ENSACLG00000002797	DARS2 (ENSACLG00000002899)
Zebra mbuna	MODERN SPECIES	1100	ENSMZEG00005011138	mcm6 (ENSMZEG00005011109)	si:ch73-71c20.5 (ENSMZEG00005011092)	tmbim1a (ENSMZEG00005011084)	ENSMZEG00005011051	catip (ENSMZEG00005011036)	casp20 (ENSMZEG00005011021)	ENSMZEG00005011006	ENSMZEG00005010998	catip (ENSMZEG00005010978)	ENSMZEG00005010926	ENSMZEG00005010900	ENSMZEG00005010884	casp20 (ENSMZEG00005010871)	ENSMZEG00005010865	kifap3b (ENSMZEG00005010840) #22	ENSMZEG00005010824 #23	ENSMZEG00005010815 #24	dusp12 (ENSMZEG00005010808) #26	TPR (ENSMZEG00005010788) #28	odr4 (ENSMZEG00005010748) #29	dpydb (ENSMZEG00005010698) #30	ptbp2b (ENSMZEG00005010677) #31	CHD7 (ENSMZEG00005010646) #32	rab2a (ENSMZEG00005010611) #33	ca8 (ENSMZEG00005010579) #34	tox (ENSMZEG00005010571) #35	cryz (ENSMZEG00005010551) #37	ENSMZEG00005010531	DARS2 (ENSMZEG00005010481)	sugt1 (ENSMZEG00005010451)
Nile tilapia	MODERN SPECIES	9	penk (ENSONIG00000031930)	ENSONIG00000027788	jph1b (ENSONIG00000006316)	ENSONIG00000043147	blvra (ENSONIG00000006324)	ENSONIG00000039789	ENSONIG00000024381	ENSONIG00000042802	ccr12a (ENSONIG00000020475)	ENSONIG00000006330	ENSONIG00000037299	ENSONIG00000006339	tmem68 (ENSONIG00000006342)	xkr4 (ENSONIG00000006346)	ENSONIG00000006347	kifap3b (ENSONIG00000016566) #22	ENSONIG00000016571 #23	ENSONIG00000016576 #24	ENSONIG00000038331	dusp12 (ENSONIG00000016579) #26	prg4a (ENSONIG00000016584) #27	TPR (ENSONIG00000016590) #28	odr4 (ENSONIG00000016598) #29	dpydb (ENSONIG00000016599) #30	ptbp2b (ENSONIG00000016603) #31	CHD7 (ENSONIG00000016614) #32	rab2a (ENSONIG00000034587) #33	ca8 (ENSONIG00000016625) #34	tox (ENSONIG00000039081) #35	cryz (ENSONIG00000016629) #37	DARS2 (ENSONIG00000016633)
Percomorphaceae_C	ANCESTRAL SPECIES	6	ENSGT00940000153304.C	ENSGT00940000156181.B	ENSGT00940000156304.c.b	ENSGT00940000159203	ENSGT00940000164519.c.a	ENSGT00940000155899.e.b	ENSGT00940000156209.v.a	ENSGT00530000063681.b.b	ENSGT00940000156460.A	ENSGT00390000000867	ENSGT00940000156470.u.b	ENSGT00390000005318.a.a.b	ENSGT00390000016559	ENSGT00940000159687	ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000161095 #36	ENSGT00940000154882 #37	ENSGT01030000234618.B
Eupercaria	ANCESTRAL SPECIES	22	ENSGT00940000153304.C	ENSGT00940000156181.B	ENSGT00940000156304.c.b	ENSGT00940000159203	ENSGT00940000164519.c.a	ENSGT00940000155899.e.b	ENSGT00940000156209.v.a	ENSGT00530000063681.b.b	ENSGT00940000156460.A	ENSGT00390000000867	ENSGT00940000156470.u.b	ENSGT00390000005318.a.a.b	ENSGT00390000016559	ENSGT00940000159687	ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000161095 #36	ENSGT00940000154882 #37	ENSGT01030000234618.B
Tetraodontidae	ANCESTRAL SPECIES	235												ENSGT00390000000867	ENSGT00940000156470.u.b	ENSGT00390000005318.a.a.b	ENSGT00390000016559	ENSGT00390000003574.b #22
Fugu	MODERN SPECIES	14	ENSTRUG00000033080	ENSTRUG00000031670	ENSTRUG00000023760 #29	ENSTRUG00000022667	dusp12 (ENSTRUG00000004164) #26	ENSTRUG00000030217	ENSTRUG00000030372	ENSTRUG00000029715	ENSTRUG00000026300	ACOT11 (ENSTRUG00000004460)	mrpl37 (ENSTRUG00000004786)	CSNK1G2 (ENSTRUG00000004935)	ENSTRUG00000028952	mfsd12a (ENSTRUG00000005278)	DEPDC5 (ENSTRUG00000005539)	kifap3b (ENSTRUG00000005998) #22	ENSTRUG00000028810	dnai4 (ENSTRUG00000006622)	DARS2 (ENSTRUG00000007129)	xpr1b (ENSTRUG00000006747)	ENSTRUG00000027320	bpnt2 (ENSTRUG00000007350)	ENSTRUG00000007454	fam110b (ENSTRUG00000022727)	ENSTRUG00000026267	ENSTRUG00000027351	ENSTRUG00000007696	ptf1a (ENSTRUG00000007713)	dlgap1a (ENSTRUG00000008401)	ENSTRUG00000032074	cahz (ENSTRUG00000008077)
Tetraodon	MODERN SPECIES	26	ENSTNIG00000005443	ENSTNIG00000005444	ENSTNIG00000005445	ENSTNIG00000000047	ENSTNIG00000001151	ENSTNIG00000000146	ercc3 (ENSTNIG00000005457)	ENSTNIG00000005458	ENSTNIG00000005466	ENSTNIG00000005473	ENSTNIG00000005474	ENSTNIG00000005918	SPATA5 (ENSTNIG00000005483)	BARHL1 (ENSTNIG00000005484)	APOBEC2 (ENSTNIG00000005485)	kifap3b (ENSTNIG00000005488) #22	mpdu1b (ENSTNIG00000005491)	ENSTNIG00000005492	ENSTNIG00000005493	ENSTNIG00000005507	ENSTNIG00000005508	bcas2 (ENSTNIG00000005509)	otud3 (ENSTNIG00000005510)	ENSTNIG00000005516	ENSTNIG00000005520	ENSTNIG00000005522	ENSTNIG00000005523	SULF2 (ENSTNIG00000005524)	ENSTNIG00000005527	ENSTNIG00000005529	nrd1b (ENSTNIG00000005530)
Eupecaria_A	ANCESTRAL SPECIES	8	ENSGT00940000153304.C	ENSGT00940000156181.B	ENSGT00940000156304.c.b	ENSGT00940000159203	ENSGT00940000164519.c.a	ENSGT00940000155899.e.b	ENSGT00940000156209.v.a	ENSGT00530000063681.b.b	ENSGT00940000156460.A	ENSGT00390000000867	ENSGT00940000156470.u.b	ENSGT00390000005318.a.a.b	ENSGT00390000016559	ENSGT00940000159687	ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000161095 #36	ENSGT00940000154882 #37	ENSGT01030000234618.B
Ballan wrasse	MODERN SPECIES	270								dusp12 (ENSLBEG00000024420) #26	blvra (ENSLBEG00000024394)	ccr12a (ENSLBEG00000024374)	mrpl37 (ENSLBEG00000024354)	csnk1g2a (ENSLBEG00000024330)	mfsd12a (ENSLBEG00000024279)	DEPDC5 (ENSLBEG00000024189)	PDC (ENSLBEG00000024098) #21	kifap3b (ENSLBEG00000024039) #22	ENSLBEG00000024013	ENSLBEG00000023992	ENSLBEG00000023966	atpsckmt (ENSLBEG00000023938)	marchf6 (ENSLBEG00000023830)	ANKRD33B (ENSLBEG00000023797)	ctnnd2b (ENSLBEG00000023736)	ENSLBEG00000023630	ENSLBEG00000023582
Eupecaria_B	ANCESTRAL SPECIES	8	ENSGT00940000153304.C	ENSGT00940000156181.B	ENSGT00940000166547.b	ENSGT00940000159203	ENSGT00940000164519.c.a	ENSGT00940000155899.e.b	ENSGT00940000156209.v.a	ENSGT00530000063681.b.b	ENSGT00940000156460.A	ENSGT00390000000867	ENSGT00940000156470.u.b	ENSGT00390000005318.a.a.b	ENSGT00390000016559	ENSGT00940000159687	ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000161095 #36	ENSGT00940000154882 #37	ENSGT01030000234618.B
Eupecaria_C	ANCESTRAL SPECIES	10	ENSGT00940000153304.C	ENSGT00940000156181.B	ENSGT00940000166547.b	ENSGT00940000159203	ENSGT00940000164519.c.a	ENSGT00940000155899.e.b	ENSGT00940000156209.v.a	ENSGT00530000063681.b.b	ENSGT00940000156460.A	ENSGT00390000000867	ENSGT00940000156470.u.b	ENSGT00390000005318.a.a.b	ENSGT00390000016559	ENSGT00940000159687	ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000161095 #36	ENSGT00940000154882 #37	ENSGT01030000234618.B
Gilthead seabream	MODERN SPECIES	13	ptf1a (ENSSAUG00010011904)	dlgap1a (ENSSAUG00010011870)	cahz (ENSSAUG00010011851)	ENSSAUG00010011849	gad3 (ENSSAUG00010011690)	exoc3 (ENSSAUG00010011682)	ENSSAUG00010011681	ENSSAUG00010011680	ENSSAUG00010011537	xkr4 (ENSSAUG00010011520)	tmem68 (ENSSAUG00010011516)	ENSSAUG00010011513	ENSSAUG00010011393	ccr12a (ENSSAUG00010011384)	PDC (ENSSAUG00010011382) #21	kifap3b (ENSSAUG00010010877) #22	ENSSAUG00010010873 #23	OLFML2B (ENSSAUG00010010872) #24	dusp12 (ENSSAUG00010010871) #26	prg4a (ENSSAUG00010010870) #27	TPR (ENSSAUG00010007971) #28	odr4 (ENSSAUG00010007955) #29	dpydb (ENSSAUG00010007417) #30	paxip1 (ENSSAUG00010007399)	en2b (ENSSAUG00010007396)	ENSSAUG00010005610	ENSSAUG00010005560	TMEM70 (ENSSAUG00010005557)	cyp7a1 (ENSSAUG00010005552)	ENSSAUG00010005550	sdr16c5a (ENSSAUG00010005547)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	8	ENSGT00940000156181.B	ENSGT00940000166547.b	ENSGT00940000156304.c.b	ENSGT00940000159203	ENSGT00940000164519.c.a	ENSGT00940000155899.e.b	ENSGT00940000156209.v.a	ENSGT00530000063681.b.b	ENSGT00940000156460.A	ENSGT00390000000867	ENSGT00940000156470.u.b	ENSGT00390000005318.a.a.b	ENSGT00390000016559	ENSGT00940000159687	ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000161095 #36	ENSGT00940000154882 #37	ENSGT01030000234618.B
Large yellow croaker	MODERN SPECIES	481	ENSLCRG00005017525	ENSLCRG00005017523	ttpa (ENSLCRG00005017518)	xpr1b (ENSLCRG00005017340)	ENSLCRG00005017332	dnai4 (ENSLCRG00005017327)	ENSLCRG00005017312	ENSLCRG00005017308	ACOT11 (ENSLCRG00005017196)	mrpl37 (ENSLCRG00005017194)	csnk1g2a (ENSLCRG00005016436)	mfsd12a (ENSLCRG00005016365)	DEPDC5 (ENSLCRG00005016299)	rab36 (ENSLCRG00005016286)	PDC (ENSLCRG00005016278) #21	kifap3b (ENSLCRG00005014508) #22	ENSLCRG00005014491 #23	OLFML2B (ENSLCRG00005014488) #24	TPR (ENSLCRG00005013257) #28	odr4 (ENSLCRG00005013208) #29	dpydb (ENSLCRG00005013062) #30	ptbp2b (ENSLCRG00005008471) #31	CHD7 (ENSLCRG00005002852) #32	rab2a (ENSLCRG00005002596) #33	ca8 (ENSLCRG00005002590) #34	tox (ENSLCRG00005002586) #35	ENSLCRG00005002583 #36	cryz (ENSLCRG00005002576) #37	DARS2 (ENSLCRG00005000452)	bpnt2 (ENSLCRG00005000409)	ankrd45 (ENSLCRG00005000403)
European seabass	MODERN SPECIES		ENSDLAG00005000050	ENSDLAG00005034775	ENSDLAG00005027883	ENSDLAG00005000055	ENSDLAG00005000057	ENSDLAG00005000058	ENSDLAG00005000059	ACOT11 (ENSDLAG00005000060)	mrpl37 (ENSDLAG00005027699)	ENSDLAG00005000061	ENSDLAG00005000062	ENSDLAG00005000063	ENSDLAG00005000064	ENSDLAG00005027010	ENSDLAG00005000128 #21	ENSDLAG00005000237 #22	ENSDLAG00005000351 #23	ENSDLAG00005026926 #24	dusp12 (ENSDLAG00005000361) #26	prg4a (ENSDLAG00005000363) #27	ENSDLAG00005028037 #28	odr4 (ENSDLAG00005006309) #29	ENSDLAG00005000398 #30	ENSDLAG00005000666 #31	CHD7 (ENSDLAG00005001098) #32	rab2a (ENSDLAG00005001631) #33	ca8 (ENSDLAG00005035106) #34	tox (ENSDLAG00005026957) #35	ENSDLAG00005032927	ENSDLAG00005027625 #37	ENSDLAG00005001782
Perciformes	ANCESTRAL SPECIES	5	ENSGT00940000166576	ENSGT00940000156220.l	ENSGT00940000161000	ENSGT00940000155751.b	ENSGT00390000012668.g.b	ENSGT00950000183056.B.b	ENSGT00390000000924	ENSGT00530000063681.b.b	ENSGT00940000156460.A	ENSGT00390000000867	ENSGT00940000156470.u.b	ENSGT00390000005318.a.a.b	ENSGT00390000016559	ENSGT00940000159687	ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00530000063751.a.b.h #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000154882 #37	ENSGT01030000234618.B	ENSGT00940000164879
Cottioidei	ANCESTRAL SPECIES	15	ENSGT00940000164640	ENSGT00940000178091	ENSGT00390000012596.e	ENSGT00940000157704.a.a	ENSGT00940000157718.c	ENSGT00940000158610.d	ENSGT00940000153304.C	ENSGT00940000156181.B	ENSGT00940000156460.A	ENSGT00390000000867	ENSGT00940000156470.u.b	ENSGT00390000005318.a.a.b	ENSGT00390000016559	ENSGT00940000159687	ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT01070000253766.A.a.a.a	ENSGT00390000011782	ENSGT00390000018056	ENSGT00940000156130.a.b	ENSGT00950000183149.A.f	ENSGT00940000156731.q.b	ENSGT00940000156600.e	ENSGT00390000000924	ENSGT00950000183056.B.b	ENSGT00390000012668.g.b	ENSGT00940000161000	ENSGT00940000156220.l	ENSGT00940000166576	ENSGT00940000166844
Stickleback	MODERN SPECIES	2	rnf2 (ENSGACG00000014602)	ENSGACG00000014610	AGL (ENSGACG00000014614)	ENSGACG00000014621	PLPPR5 (ENSGACG00000014623)	tyw3 (ENSGACG00000014630)	ENSGACG00000014632	KCNH2 (ENSGACG00000014637)	ACOT11 (ENSGACG00000014650)	mrpl37 (ENSGACG00000014661)	csnk1g2a (ENSGACG00000014664)	mfsd12a (ENSGACG00000014668)	DEPDC5 (ENSGACG00000014670)	rab36 (ENSGACG00000014678)	PDC (ENSGACG00000014695) #21	kifap3b (ENSGACG00000014703) #22	ENSGACG00000014711 #23	xkr4 (ENSGACG00000014715)	tmem68 (ENSGACG00000014718)	ENSGACG00000014724	jph1b (ENSGACG00000014728)	penka (ENSGACG00000014732)	sdr16c5a (ENSGACG00000014733)	ENSGACG00000014747	ENSGACG00000014753	fam110b (ENSGACG00000014755)	ENSGACG00000014756	ptf1a (ENSGACG00000014760)	dlgap1a (ENSGACG00000014766)	cahz (ENSGACG00000014774)	ENSGACG00000014800
Lumpfish	MODERN SPECIES	8	AGL (ENSCLMG00005018629)	ENSCLMG00005018615	PALMD (ENSCLMG00005018614)	PLPPR5 (ENSCLMG00005018613)	tyw3 (ENSCLMG00005018611)	ENSCLMG00005018610	ENSCLMG00005018609	ACOT11 (ENSCLMG00005018596)	mrpl37 (ENSCLMG00005018595)	CSNK1G2 (ENSCLMG00005018230)	mfsd12a (ENSCLMG00005018180)	DEPDC5 (ENSCLMG00005007666)	rab36 (ENSCLMG00005007608)	ENSCLMG00005007606	PDC (ENSCLMG00005007605) #21	kifap3b (ENSCLMG00005007229) #22	ENSCLMG00005007216 #23	xkr4 (ENSCLMG00005007210)	tmem68 (ENSCLMG00005007204)	ENSCLMG00005007202	JPH1 (ENSCLMG00005007200)	penka (ENSCLMG00005007198)	sdr16c5a (ENSCLMG00005007197)	ENSCLMG00005007031	atg10 (ENSCLMG00005007026)	fam110b (ENSCLMG00005007014)	ENSCLMG00005007012	ptf1a (ENSCLMG00005007011)	ENSCLMG00005006998	cahz (ENSCLMG00005006995)	gad3 (ENSCLMG00005001849)
Perciformes_a	ANCESTRAL SPECIES	24											ENSGT00940000156470.u.b	ENSGT00390000005318.a.a.b	ENSGT00390000016559	ENSGT00940000159687	ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00530000063751.a.b.h #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000154882 #37	ENSGT01030000234618.B	ENSGT00940000164879
Channel bull blenny	MODERN SPECIES	130												CSNK1G2 (ENSCGOG00000017207)	mfsd12a (ENSCGOG00000017975)	rab36 (ENSCGOG00000017980)	PDC (ENSCGOG00000017993) #21	kifap3b (ENSCGOG00000017995) #22
Pike perch	MODERN SPECIES	240									csnk1g2a (ENSSLUG00000025848)	mfsd12a (ENSSLUG00000025827)	DEPDC5 (ENSSLUG00000025786)	rab36 (ENSSLUG00000025743)	ENSSLUG00000025740	ENSSLUG00000025738	PDC (ENSSLUG00000025736) #21	kifap3b (ENSSLUG00000025690) #22	ENSSLUG00000025588 #23	ENSSLUG00000025586 #24	dusp12 (ENSSLUG00000025580) #26	TPR (ENSSLUG00000025556) #28	odr4 (ENSSLUG00000025519) #29	dpydb (ENSSLUG00000025481) #30	ptbp2b (ENSSLUG00000025445) #31	CHD7 (ENSSLUG00000025341) #32	rab2a (ENSSLUG00000025294) #33	ca8 (ENSSLUG00000025290) #34	mfsd12a (ENSSLUG00000025286)	ENSSLUG00000025283	cryz (ENSSLUG00000025277) #37	ENSSLUG00000025265	DARS2 (ENSSLUG00000025262)
Percomorphaceae_D	ANCESTRAL SPECIES	6	ENSGT00920000149161	ENSGT00940000158543	ENSGT00390000003140.A	ENSGT00940000165818	ENSGT00940000155161	ENSGT00940000156200.A	ENSGT00940000159742.rb	ENSGT00940000154805.b.g.e.b.d	ENSGT00940000154805.b.g.e.b.c	ENSGT00990000203911	ENSGT00940000159432.C	ENSGT00530000063693.a.a	ENSGT00940000166060	ENSGT00940000157790	ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000154882 #37	ENSGT01030000234618.B	ENSGT00940000164879
Anabantaria	ANCESTRAL SPECIES	8	ENSGT00920000149161	ENSGT00940000158543	ENSGT00390000003140.A	ENSGT00940000165818	ENSGT00940000155161	ENSGT00940000156200.A	ENSGT00940000159742.rb	ENSGT00990000203911	ENSGT00940000154805.b.g.e.b.d	ENSGT00940000154805.b.g.e.b.c	ENSGT00940000159432.C	ENSGT00530000063693.a.a	ENSGT00940000166060	ENSGT00940000157790	ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000154882 #37	ENSGT01030000234618.B	ENSGT00940000164879
Zig-zag eel	MODERN SPECIES	8	brinp2 (ENSMAMG00000012633)	ENSMAMG00000012609	ENSMAMG00000012571	ENSMAMG00000012550	ENSMAMG00000026207	ENSMAMG00000012535	ENSMAMG00000012523	myh7 (ENSMAMG00000012443)	ENSMAMG00000025663	myh7 (ENSMAMG00000012282)	fitm1l (ENSMAMG00000012201)	trnau1apb (ENSMAMG00000012192)	ENSMAMG00000012174	ENSMAMG00000012153	ENSMAMG00000012124 #21	ENSMAMG00000012070 #22	ENSMAMG00000012052 #23	ENSMAMG00000012018 #26	ENSMAMG00000011975 #24	prg4a (ENSMAMG00000011941) #27	ENSMAMG00000011784 #28	odr4 (ENSMAMG00000011684) #29	ENSMAMG00000011672	ENSMAMG00000011621 #30	ENSMAMG00000011582 #31	CHD7 (ENSMAMG00000011569) #32	rab2a (ENSMAMG00000011549) #33	ca8 (ENSMAMG00000011532) #34	ENSMAMG00000024843	tox (ENSMAMG00000011519) #35	ENSMAMG00000011494 #37
Anabantoidei	ANCESTRAL SPECIES	30	ENSGT00940000156304.c.b	ENSGT00940000166547	ENSGT00940000159203	ENSGT00940000164519.c.a	ENSGT00940000155899.e.b	ENSGT00940000156209.v.a	ENSGT00530000063681.b.b	ENSGT00940000156460.A	ENSGT00390000000867	ENSGT00940000156470.u.b	ENSGT00390000005318.a.a.b	ENSGT00390000016559	ENSGT00940000159687	ENSGT00940000157790	ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000154882 #37	ENSGT01030000234618.B	ENSGT00940000164879
Climbing perch	MODERN SPECIES	8	ENSATEG00000026957	ENSATEG00000028546	ENSATEG00000004014	ENSATEG00000028612	ENSATEG00000003966	ENSATEG00000003925	ENSATEG00000003690	ENSATEG00000003817	ENSATEG00000003789	ENSATEG00000003741	ENSATEG00000003877	ENSATEG00000003538	ENSATEG00000003390	ENSATEG00000003368	ENSATEG00000003309 #21	ENSATEG00000003176 #22	ENSATEG00000003164 #23	ENSATEG00000003154 #24	dusp12 (ENSATEG00000003117) #26	ENSATEG00000002851 #28	odr4 (ENSATEG00000002841) #29	ENSATEG00000002731 #30	ENSATEG00000002722 #31	CHD7 (ENSATEG00000002590) #32	rab2a (ENSATEG00000002553) #33	ca8 (ENSATEG00000028855) #34	ca8 (ENSATEG00000025910) #34	tox (ENSATEG00000002446) #35	ENSATEG00000002313 #37	ENSATEG00000002270 #37	ENSATEG00000002262
Siamese fighting fish	MODERN SPECIES	8	ENSBSLG00000024042	ENSBSLG00000024045	ENSBSLG00000024049	ENSBSLG00000024051	ENSBSLG00000024053	ENSBSLG00000024056	ENSBSLG00000024057	ENSBSLG00000024058	ENSBSLG00000024059	ENSBSLG00000024062	ENSBSLG00000024064	zgc:162816 (ENSBSLG00000024069)	ENSBSLG00000024076	CFAP410 (ENSBSLG00000024207)	zgc:171772 (ENSBSLG00000024214)	kifap3b (ENSBSLG00000024251) #22	ENSBSLG00000024731 #23	ENSBSLG00000024739	OLFML2B (ENSBSLG00000024746) #24	dusp12 (ENSBSLG00000024754) #26	prg4a (ENSBSLG00000024773) #27	odr4 (ENSBSLG00000024872) #29	dpydb (ENSBSLG00000024910) #30	ENSBSLG00000025384	ENSBSLG00000025402	stk11 (ENSBSLG00000025416)	SUGP1 (ENSBSLG00000025481)	rnf126 (ENSBSLG00000025588)	ENSBSLG00000025594	ENSBSLG00000025614	fzr1a (ENSBSLG00000025629)
Carangaria	ANCESTRAL SPECIES	5	ENSGT00920000149161	ENSGT00940000158543	ENSGT00390000003140.A	ENSGT00940000165818	ENSGT00940000155161	ENSGT00940000156200.A	ENSGT00940000159742.rb	ENSGT00990000203911	ENSGT00940000154805.b.g.e.b.d	ENSGT00940000154805.b.g.e.b.c	ENSGT00940000159432.C	ENSGT00530000063693.a.a	ENSGT00940000166060	ENSGT00940000157790	ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000154882 #37	ENSGT01030000234618.B	ENSGT00940000164879
Pleuronectoidei	ANCESTRAL SPECIES	1	ENSGT00920000149161	ENSGT00940000158543	ENSGT00390000003140.A	ENSGT00940000165818	ENSGT00940000155161	ENSGT00940000156200.A	ENSGT00940000159742.rb	ENSGT00940000154805.b.g.e.b.d	ENSGT00990000203911	ENSGT00940000154805.b.g.e.b.c	ENSGT00940000159432.C	ENSGT00530000063693.a.a	ENSGT00940000166060	ENSGT00940000159846.a.a.c	ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34	ENSGT00940000159497 #35	ENSGT00940000154882 #37	ENSGT01030000234618.B	ENSGT00940000164879
Tongue sole	MODERN SPECIES	12	ENSCSEG00000021117	LRRC24 (ENSCSEG00000021115)	slc6a9 (ENSCSEG00000021110)	klf17 (ENSCSEG00000021108)	klhl20 (ENSCSEG00000021070)	lhx8a (ENSCSEG00000021069)	ENSCSEG00000021067	ENSCSEG00000021065	myh7 (ENSCSEG00000021064)	myh7 (ENSCSEG00000020930)	myh7 (ENSCSEG00000020685)	myh7l (ENSCSEG00000018616)	fitm1l (ENSCSEG00000018233)	trnau1apb (ENSCSEG00000018215)	ENSCSEG00000018199	kifap3b (ENSCSEG00000018181) #22	ENSCSEG00000018169 #23	ENSCSEG00000018165 #24	dusp12 (ENSCSEG00000018154) #26	TPR (ENSCSEG00000018077) #28	odr4 (ENSCSEG00000018012) #29	dpydb (ENSCSEG00000017980) #30	ptbp2b (ENSCSEG00000017942) #31	CHD7 (ENSCSEG00000017886) #32	rab2a (ENSCSEG00000017211) #33	ca8 (ENSCSEG00000017183) #34	tox (ENSCSEG00000017169) #35	cryz (ENSCSEG00000017160) #37	DARS2 (ENSCSEG00000017136)	bpnt2 (ENSCSEG00000017120)	TMEM70 (ENSCSEG00000017131)
Turbot	MODERN SPECIES	19	ASTN1 (ENSSMAG00000016890)	brinp2 (ENSSMAG00000016971)	ENSSMAG00000017018	ENSSMAG00000017029	ENSSMAG00000017060	ENSSMAG00000033886	ENSSMAG00000019154	ENSSMAG00000013690	ENSSMAG00000037749	ENSSMAG00000019070	myh7l (ENSSMAG00000002571)	ENSSMAG00000001745	ENSSMAG00000001738	ENSSMAG00000001718	ENSSMAG00000001596 #21	ENSSMAG00000001503 #22	ENSSMAG00000001488 #23	ENSSMAG00000001466 #24	dusp12 (ENSSMAG00000001443) #26	prg4a (ENSSMAG00000001410) #27	ENSSMAG00000001286 #28	odr4 (ENSSMAG00000001266) #29	ENSSMAG00000001180 #30	ENSSMAG00000001131 #31	CHD7 (ENSSMAG00000001030) #32	rab2a (ENSSMAG00000001002) #33	ca8 (ENSSMAG00000000968) #34	tox (ENSSMAG00000000920) #35	ENSSMAG00000000876 #37	ENSSMAG00000000796	ENSSMAG00000017469
Carangaria_A	ANCESTRAL SPECIES	2	ENSGT00920000149161	ENSGT00940000158543	ENSGT00390000003140.A	ENSGT00940000165818	ENSGT00940000155161	ENSGT00940000156200.A	ENSGT00940000159742.rb	ENSGT00940000154805.b.g.e.b.d	ENSGT00940000154805.b.g.e.b.c	ENSGT00990000203911	ENSGT00940000159432.C	ENSGT00530000063693.a.a	ENSGT00940000166060	ENSGT00940000159846.a.a.c	ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000158863 #34
Seriola	ANCESTRAL SPECIES	129										ENSGT00500000044896 #30	ENSGT01050000244924.a.b.h #31	ENSGT00940000153649.A #32	ENSGT00940000153886.a.b #33	ENSGT00940000157790	ENSGT00940000156236.a.b #21	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.h #23	ENSGT00940000157757.g.b #24	ENSGT00930000151041 #26	ENSGT00530000063751.a.b #27	ENSGT00730000111014.o.a #28	ENSGT00390000012568 #29	ENSGT00390000000715	ENSGT00940000153167.B	ENSGT00940000167820	ENSGT00510000049326.b.a	ENSGT01050000244838.B.a	ENSGT00940000157139.b	ENSGT00940000158362	ENSGT00390000018302	ENSGT00940000158011
Greater amberjack	MODERN SPECIES	264									ca8 (ENSSDUG00000013961) #34	dpydb (ENSSDUG00000013875) #30	ptbp2b (ENSSDUG00000013833) #31	CHD7 (ENSSDUG00000013773) #32	rab2a (ENSSDUG00000013724) #33	kcnh2a (ENSSDUG00000013672)	PDC (ENSSDUG00000013654) #21	kifap3b (ENSSDUG00000013588) #22	ENSSDUG00000013543 #23	OLFML2B (ENSSDUG00000013527) #24	dusp12 (ENSSDUG00000013512) #26	prg4a (ENSSDUG00000013442) #27	TPR (ENSSDUG00000013362) #28	odr4 (ENSSDUG00000013326) #29	tmem53 (ENSSDUG00000013305)	toe1 (ENSSDUG00000013278)	si:ch73-382f3.1 (ENSSDUG00000013266)	ENSSDUG00000013249	elovl8a (ENSSDUG00000013211)	fabp6 (ENSSDUG00000013182)	zswim5 (ENSSDUG00000013129)	urod (ENSSDUG00000013106)	lyn (ENSSDUG00000012519)
Yellowtail amberjack	MODERN SPECIES	2655											ENSSLDG00000022663 #32	CHD7 (ENSSLDG00000022595) #32	rab2a (ENSSLDG00000022555) #33	ENSSLDG00000022532	PDC (ENSSLDG00000022509) #21	kifap3b (ENSSLDG00000022470) #22	OLFML2B (ENSSLDG00000022429) #24	dusp12 (ENSSLDG00000022399) #26	prg4a (ENSSLDG00000022384) #27	TPR (ENSSLDG00000022063) #28	odr4 (ENSSLDG00000021997) #29	tmem53 (ENSSLDG00000021988)	toe1 (ENSSLDG00000021979)	si:ch73-382f3.1 (ENSSLDG00000021969)	ENSSLDG00000021958	elovl8a (ENSSLDG00000021946)	fabp6 (ENSSLDG00000021872)	zswim5 (ENSSLDG00000021843)	urod (ENSSLDG00000021698)	lyn (ENSSLDG00000021626)	ENSSLDG00000021616
Barramundi perch	MODERN SPECIES	77				klhl20 (ENSLCAG00010008014)	ENSLCAG00010008180	lhx8a (ENSLCAG00010008184)	ENSLCAG00010008191	ENSLCAG00010008198	myh7 (ENSLCAG00010009514)	myh7 (ENSLCAG00010015140)	fitm1l (ENSLCAG00010015291)	trnau1apb (ENSLCAG00010015295)	ENSLCAG00010015299	kcnh2a (ENSLCAG00010015317)	PDC (ENSLCAG00010015351) #21	kifap3b (ENSLCAG00010015477) #22	ENSLCAG00010015944 #23	ENSLCAG00010015948 #24	dusp12 (ENSLCAG00010015950) #26	ENSLCAG00010015951	prg4a (ENSLCAG00010015955) #27	TPR (ENSLCAG00010015959) #28	odr4 (ENSLCAG00010015965) #29	dpydb (ENSLCAG00010015993) #30	ptbp2b (ENSLCAG00010016065) #31	ENSLCAG00010016082 #32
Pinecone sodierfish	MODERN SPECIES	8														mfsd12a (ENSMMDG00005019925)	PDC (ENSMMDG00005019928) #21	KIFAP3 (ENSMMDG00005019998) #22	ENSMMDG00005022316 #23	ENSMMDG00005022320 #24	dusp12 (ENSMMDG00005022322) #26	prg4a (ENSMMDG00005022325) #27	TPR (ENSMMDG00005022328) #28	odr4 (ENSMMDG00005022337) #29	rnf2 (ENSMMDG00005022338)	ENSMMDG00005022342	AGL (ENSMMDG00005022360)	ENSMMDG00005022480	PLPPR5 (ENSMMDG00005022483)	PLPPR4 (ENSMMDG00005022520)	ptbp2b (ENSMMDG00005022534) #31	dpydb (ENSMMDG00005022666) #30	ENSMMDG00005022676
Cod	MODERN SPECIES	21	ENSGMOG00000022214	ENSGMOG00000025577 #37	ENSGMOG00000007436	ENSGMOG00000025885	ENSGMOG00000006947	ENSGMOG00000006956	ENSGMOG00000006972	ENSGMOG00000014481	ENSGMOG00000015473 #31	ENSGMOG00000018917	ENSGMOG00000017508	ENSGMOG00000009060	ENSGMOG00000009051	ENSGMOG00000032715	ENSGMOG00000018518 #21	ENSGMOG00000018107 #22	ENSGMOG00000010376 #26	ENSGMOG00000013075 #28	ENSGMOG00000034702	ENSGMOG00000013119 #29	ENSGMOG00000030154	ENSGMOG00000002403	ENSGMOG00000006396	cop1 (ENSGMOG00000006356)	ENSGMOG00000001009	ENSGMOG00000031909	brinp2 (ENSGMOG00000035387)	ENSGMOG00000001160	ENSGMOG00000001187	ENSGMOG00000013118	ENSGMOG00000036652
Protacanthopterygii	ANCESTRAL SPECIES	32	ENSGT00940000157634.d	ENSGT00940000159735	ENSGT00950000183128.B	ENSGT00940000158429	ENSGT00390000012433.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00940000164586.h	ENSGT00940000159218.a	ENSGT00390000014590	ENSGT00520000060044	ENSGT00390000010157.a	ENSGT00390000006876	ENSGT00940000156470.v.a	ENSGT00390000005318.a.a.b	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.g.a ##23	ENSGT00940000154499	ENSGT00940000162889	ENSGT00940000155682.g.b	ENSGT00390000018786	ENSGT00390000015228	ENSGT00390000018807	ENSGT00390000016988.a.a.b	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316	ENSGT00940000159677.a.a	ENSGT00940000163427.d	ENSGT00390000004859.c.b	ENSGT00940000160141.e.a
Salmoninae	ANCESTRAL SPECIES	661											ENSGT01030000237605	ENSGT00940000154587.a.b.v	ENSGT00940000156470.u.b.d	ENSGT00390000005318.a.a.b	ENSGT00940000159466.f	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.g.a ##23	ENSGT00940000154499.hb	ENSGT00940000155682.g.b.c	ENSGT00390000018786	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316
Huchen	DUPLICATION
Huchen	MODERN SPECIES	8290																KIFAP3 (ENSHHUG00000005642) #22
Huchen	MODERN SPECIES	7285																ENSHHUG00000018330 #22
Salmoninae_a	ANCESTRAL SPECIES	51	ENSGT00940000157634.d.h	ENSGT00940000159735	ENSGT00950000183128.B.j	ENSGT00940000158429	ENSGT00390000012433.b.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00390000014590	ENSGT00520000060044	ENSGT00390000010157.a	ENSGT00940000156207.b.c.a.b.a.a.a	ENSGT00940000154587.a.b.v	ENSGT00940000156470.u.b.d	ENSGT00390000005318.a.a.b	ENSGT00940000159466.f	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.g.a ##23	ENSGT00940000155682.g.b.c	ENSGT00390000018786	ENSGT00390000015228	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263556.a.a.p.a	ENSGT01090000260052.a.b.i	ENSGT00940000159827.e	ENSGT00450000040296	ENSGT00550000074817.v	ENSGT00940000157341.g	ENSGT00390000003289.m.a
Oncorhynchus	ANCESTRAL SPECIES	46	ENSGT00940000157634.d.h	ENSGT00940000159735	ENSGT00950000183128.B.j	ENSGT00940000158429	ENSGT00390000012433.b.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00390000014590	ENSGT00520000060044	ENSGT00390000010157.a	ENSGT00940000156207.b.c.a.b.a.a.a	ENSGT00940000154587.a.b.v	ENSGT00940000156470.u.b.d	ENSGT00390000005318.a.a.b	ENSGT00940000159466.f	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.g.a ##23	ENSGT00940000154499.hb.d	ENSGT00940000162889.e.d	ENSGT00940000155682.g.b.c	ENSGT00390000018786	ENSGT00390000015228	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263556.a.a.p.a	ENSGT01090000260052.a.b.i	ENSGT00940000159827.e	ENSGT00450000040296	ENSGT00550000074817.v
Rainbow trout	MODERN SPECIES	29	csnk1g2a (ENSOMYG00000069481)	ENSOMYG00000065728	mknk2a (ENSOMYG00000008832)	ENSOMYG00000008864	yipf1 (ENSOMYG00000008888)	zgc:113691 (ENSOMYG00000008900)	ndc1 (ENSOMYG00000008961)	ENSOMYG00000009096	ENSOMYG00000009303	acadm (ENSOMYG00000009406)	ENSOMYG00000009432	ENSOMYG00000068137	ENSOMYG00000070813	ENSOMYG00000040367	ENSOMYG00000074048	kifap3b (ENSOMYG00000051848) #22	ENSOMYG00000052984	ENSOMYG00000060736	ENSOMYG00000053433 ##23	rnf2 (ENSOMYG00000059763)	ENSOMYG00000060331	ENSOMYG00000053025	ENSOMYG00000008232	ENSOMYG00000066731	ENSOMYG00000008150	ENSOMYG00000008197	ENSOMYG00000030486	ENSOMYG00000065507	ENSOMYG00000069628	ENSOMYG00000055913	ENSOMYG00000070710
Oncorhynchus_a	ANCESTRAL SPECIES	124	ENSGT00940000157634.d.h	ENSGT00940000159735	ENSGT00950000183128.B.j	ENSGT00940000158429	ENSGT00390000012433.b.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00390000014590	ENSGT00520000060044	ENSGT00390000010157.a	ENSGT00940000156207.b.c.a.b.a.a.a	ENSGT00940000154587.a.b.v	ENSGT00940000156470.u.b.d	ENSGT00390000005318.a.a.b	ENSGT00940000159466.f	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.g.a ##23	ENSGT00940000154499.hb.d	ENSGT00940000162889.e.d	ENSGT00940000155682.g.b.c	ENSGT00390000018786	ENSGT00390000015228	ENSGT00390000016988.b	ENSGT00940000156882	ENSGT00390000010316	ENSGT00950000183014.f.b.b.a.b	ENSGT01090000260052.a.b.i	ENSGT00940000159827.e	ENSGT00450000040296	ENSGT00550000074817.v	ENSGT00940000157341.g
Coho salmon	MODERN SPECIES	23	st6galnac3 (ENSOKIG00005030131)	rabggtb (ENSOKIG00005030206)	acadm (ENSOKIG00005030270)	RPS8 (ENSOKIG00005030829)	hectd3 (ENSOKIG00005030910)	BEST4 (ENSOKIG00005031658)	ndc1 (ENSOKIG00005031718)	zgc:113691 (ENSOKIG00005031831)	yipf1 (ENSOKIG00005031840)	ENSOKIG00005031870	mknk2a (ENSOKIG00005031885)	ENSOKIG00005031961	ENSOKIG00005032008	mfsd12a (ENSOKIG00005032281)	prrx1a (ENSOKIG00005032405)	kifap3b (ENSOKIG00005032443) #22	ENSOKIG00005032638 ##23	rnf2 (ENSOKIG00005032723)	COL6A1 (ENSOKIG00005032756)	COL6A2 (ENSOKIG00005032823)	zgc:162816 (ENSOKIG00005032965)	ENSOKIG00005032991	ENSOKIG00005033276	pecr (ENSOKIG00005033339)	ndufb3 (ENSOKIG00005033350)	ENSOKIG00005033361	XCR1 (ENSOKIG00005033419)	NEUROD6 (ENSOKIG00005033423)	ENSOKIG00005033428	bag1 (ENSOKIG00005033434)	ENSOKIG00005033493
Chinook salmon	MODERN SPECIES	681																kifap3b (ENSOTSG00005038726) #22	ENSOTSG00005038755 ##23	rnf2 (ENSOTSG00005038757)
Salmo	ANCESTRAL SPECIES	21	ENSGT00940000159735	ENSGT00940000158429	ENSGT00950000183128.B.i.a	ENSGT00940000165774	ENSGT00390000012433.b.b	ENSGT00940000159923	ENSGT00940000160852	ENSGT00390000014590	ENSGT00520000060044	ENSGT00390000010157.a	ENSGT00940000156207.b.c.a.b.a.a.a	ENSGT00940000154587.a.b.v	ENSGT00940000156470.u.b.d	ENSGT00390000005318.a.a.b	ENSGT00940000159466.f	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.g.a ##23	ENSGT00940000154499.hb.b	ENSGT00940000155682.g.b.c	ENSGT00390000018786	ENSGT00390000015228	ENSGT00390000016988.a.a.a.b.c	ENSGT00940000156882	ENSGT00390000010316	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263556.a.a.p.a	ENSGT01090000260052.a.b.i	ENSGT00940000159827.e	ENSGT00450000040296.q	ENSGT00550000074817.v	ENSGT00940000157341.g
Atlantic salmon	MODERN SPECIES	5	ENSSSAG00000040446	hectd3 (ENSSSAG00000006655)	ENSSSAG00000077776	ENSSSAG00000097561	ENSSSAG00000095504	ENSSSAG00000082681	ndc1 (ENSSSAG00000077793)	zgc:113691 (ENSSSAG00000078175)	yipf1 (ENSSSAG00000078179)	ENSSSAG00000078182	mknk2a (ENSSSAG00000105404)	ENSSSAG00000083965	csnk1g2a (ENSSSAG00000040163)	mfsd12a (ENSSSAG00000120062)	prrx1a (ENSSSAG00000104687)	kifap3b (ENSSSAG00000110039) #22	ENSSSAG00000047151 ##23	rnf2 (ENSSSAG00000093859)	ENSSSAG00000114011	ENSSSAG00000112044	ENSSSAG00000102193	ENSSSAG00000010340	ENSSSAG00000005914	ENSSSAG00000111495	ENSSSAG00000005923	ENSSSAG00000005944	pecr (ENSSSAG00000006003)	ENSSSAG00000006051	ENSSSAG00000006077	ENSSSAG00000121553	ENSSSAG00000102794
River trout	MODERN SPECIES	13	ENSSTUG00000002728	ENSSTUG00000002732	rabggtb (ENSSTUG00000002745)	acadm (ENSSTUG00000002833)	RPS8 (ENSSTUG00000004036)	hectd3 (ENSSTUG00000004172)	BEST4 (ENSSTUG00000004766)	ndc1 (ENSSTUG00000004812)	zgc:113691 (ENSSTUG00000005725)	yipf1 (ENSSTUG00000005728)	ENSSTUG00000005743	mknk2a (ENSSTUG00000005779)	csnk1g2a (ENSSTUG00000006517)	mfsd12a (ENSSTUG00000006728)	prrx1a (ENSSTUG00000006833)	kifap3b (ENSSTUG00000006848) #22	ENSSTUG00000007018 ##23	ENSSTUG00000007104	rnf2 (ENSSTUG00000007110)	COL6A2 (ENSSTUG00000007125)	zgc:162816 (ENSSTUG00000007152)	ENSSTUG00000007173	ENSSTUG00000007203	pecr (ENSSTUG00000007212)	ndufb3 (ENSSTUG00000007219)	ENSSTUG00000007229	ENSSTUG00000007272	XCR1 (ENSSTUG00000007283)	neurod6b (ENSSTUG00000007286)	bag1 (ENSSTUG00000007290)	ENSSTUG00000007301
Northern pike	MODERN SPECIES	2	BEST4 (ENSELUG00000025851)	ENSELUG00000011734	ENSELUG00000011743	ndc1 (ENSELUG00000011782)	zgc:113691 (ENSELUG00000011797)	yipf1 (ENSELUG00000000429)	ENSELUG00000030647	ENSELUG00000011838	ENSELUG00000011864	znf414 (ENSELUG00000032352)	ENSELUG00000030847	mknk2a (ENSELUG00000000430)	CSNK1G2 (ENSELUG00000011991)	mfsd12a (ENSELUG00000001637)	prrx1a (ENSELUG00000012056)	kifap3b (ENSELUG00000012102) #22	ENSELUG00000012243	ENSELUG00000012288 ##23	rnf2 (ENSELUG00000012310)	ivns1abpb (ENSELUG00000012365)	mrc1b (ENSELUG00000029154)	ENSELUG00000028016	COL6A1 (ENSELUG00000012467)	ENSELUG00000027054	COL6A2 (ENSELUG00000012520)	zgc:162816 (ENSELUG00000012541)	ENSELUG00000012606	CFAP410 (ENSELUG00000033795)	zgc:171772 (ENSELUG00000000463)	pecr (ENSELUG00000012660)	ndufb3 (ENSELUG00000012669)
Otomorpha	ANCESTRAL SPECIES	573														ENSGT00940000156470.u.b	ENSGT00390000005318.a.a.b	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.g.a ##23	ENSGT00940000154499
Otophysi	ANCESTRAL SPECIES	5	ENSGT01090000260100.B.b	ENSGT00940000158447	ENSGT00390000017498.b	ENSGT00940000153241.B.d	ENSGT00940000156474.a.a	ENSGT00940000156970.c.a	ENSGT00940000159656.a.b	ENSGT00940000161104	ENSGT00940000156577.b	ENSGT00940000157247.a.b	ENSGT00440000037733.e	ENSGT00940000158800.fb	ENSGT00390000006876	ENSGT00940000156470.u.b	ENSGT00390000005318.a.a.b	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.g.a ##23	ENSGT00940000154499	ENSGT00940000154654.a.b.g	ENSGT01030000234606.b.e.a	ENSGT00390000010743.a.b	ENSGT00940000156236.b ##21	ENSGT00390000012568 #29	ENSGT00730000111014.o.a #28	ENSGT00530000063751.a.b #27	ENSGT01020000231030	ENSGT00930000151041 #26	ENSGT00940000157757.g.b #24	ENSGT00940000164640	ENSGT00940000178091	ENSGT00390000012596.e
Characiphysae	ANCESTRAL SPECIES	77	ENSGT00940000153241.B.d	ENSGT00940000156474.a.a	ENSGT00940000156970.c.a	ENSGT00940000159656.a.b	ENSGT00940000161104	ENSGT00940000156577.b	ENSGT00940000157247.a.b	ENSGT00440000037733.e	ENSGT00940000158800.fb	ENSGT00390000006876	ENSGT01030000237605	ENSGT00940000154587.a.b.m	ENSGT00940000156470.u.b	ENSGT00390000005318.a.a.b	ENSGT00940000159466.d	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.g.a ##23	ENSGT00940000154499	ENSGT00390000001254	ENSGT00940000155635	ENSGT00940000154654.a.b.g	ENSGT01030000234606.b.e.a	ENSGT00390000010743.a.b	ENSGT00940000156236.b ##21	ENSGT00390000012568 #29	ENSGT00730000111014.o.a #28	ENSGT00530000063751.a.b #27	ENSGT00930000151041 #26	ENSGT00940000157757.g.b #24	ENSGT00940000164640	ENSGT00390000012596.e
Characiphysae_b	ANCESTRAL SPECIES	63	ENSGT00940000158447	ENSGT00390000017498.b	ENSGT00940000153241.B.d	ENSGT00940000156474.a.a	ENSGT00940000156970.c.a	ENSGT00940000159656.a.b	ENSGT00940000161104	ENSGT00940000156577.b	ENSGT00940000157247.a.b	ENSGT00440000037733.e	ENSGT00940000158800.fb	ENSGT00390000006876	ENSGT00940000156470.u.b	ENSGT00390000005318.a.a.b	ENSGT00940000159466.d	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.g.a ##23	ENSGT00940000154499	ENSGT00390000001254	ENSGT00940000155635	ENSGT00940000154654.a.b.g	ENSGT01030000234606.b.e.a	ENSGT00390000010743.a.b	ENSGT00940000156236.b ##21	ENSGT00390000012568 #29	ENSGT00730000111014.o.a #28	ENSGT00530000063751.a.b #27	ENSGT00940000166054.c	ENSGT00940000166019	ENSGT00940000159221.j	ENSGT00930000151041 #26
Characoidei	ANCESTRAL SPECIES	74	ENSGT00940000158447	ENSGT00390000017498.b	ENSGT00940000153241.B.d	ENSGT00940000156474.a.a	ENSGT00940000156970.c.a	ENSGT00940000159656.a.b	ENSGT00940000161104	ENSGT00940000156577.b	ENSGT00940000157247.a.b	ENSGT00440000037733.e	ENSGT00940000158800.fb	ENSGT00390000006876	ENSGT00940000156470.u.b	ENSGT00390000005318.a.a.b	ENSGT00940000159466.d	ENSGT00390000003574.b #22	ENSGT00390000016193	ENSGT00940000154149.b.a.g.a ##23	ENSGT00940000154499	ENSGT00940000154654.a.b.g	ENSGT01030000234606.b.e.a	ENSGT00390000010743.a.b	ENSGT00940000156236.b ##21	ENSGT00390000012568 #29	ENSGT00730000111014.o.a #28	ENSGT00530000063751.a.b #27	ENSGT00940000166054.c	ENSGT00940000166019	ENSGT00940000159221.j	ENSGT00930000151041 #26	ENSGT00940000157757.g.b #24
Red-bellied piranha	MODERN SPECIES	651															prrx1a (ENSPNAG00000029371)	kifap3b (ENSPNAG00000029466) #22	MBLAC1 (ENSPNAG00000029470)	ENSPNAG00000004612 ##23	rnf2 (ENSPNAG00000029511)	ivns1abpb (ENSPNAG00000004658)	ENSPNAG00000029630	ENSPNAG00000029639
Mexicana tetra	MODERN SPECIES		ESPNL (ENSAMXG00000005914)	rab6bb (ENSAMXG00000005911)	aire (ENSAMXG00000029147)	amotl2b (ENSAMXG00000037844)	ENSAMXG00000005851	ENSAMXG00000042872	sap130b (ENSAMXG00000005800)	mllt1b (ENSAMXG00000005765)	znf414 (ENSAMXG00000005757)	ENSAMXG00000034186	ENSAMXG00000035043	mknk2a (ENSAMXG00000005705)	csnk1g2a (ENSAMXG00000005682)	mfsd12a (ENSAMXG00000030010)	prrx1a (ENSAMXG00000034043)	kifap3b (ENSAMXG00000005640) #22	MBLAC1 (ENSAMXG00000005619)	ENSAMXG00000033851 ##23	rnf2 (ENSAMXG00000005594)	ivns1abpb (ENSAMXG00000005578)	ENSAMXG00000029027	ENSAMXG00000032845	arpc5a (ENSAMXG00000005548)	pla2g4aa (ENSAMXG00000005517)	ptgs2a (ENSAMXG00000005495)	pdca (ENSAMXG00000035849) ##21	odr4 (ENSAMXG00000005471) #29	TPR (ENSAMXG00000005429) #28	ENSAMXG00000037159 #28	prg4a (ENSAMXG00000005411) #27	ENSAMXG00000041881
Electric eel	MODERN SPECIES	19	agxtb (ENSEEEG00000020861)	KIF1A (ENSEEEG00000020844)	ESPNL (ENSEEEG00000020841)	rab6bb (ENSEEEG00000020809)	aire (ENSEEEG00000020805)	amotl2b (ENSEEEG00000020801)	ENSEEEG00000020773	sap130b (ENSEEEG00000020148)	mllt1b (ENSEEEG00000020134)	znf414 (ENSEEEG00000020133)	ENSEEEG00000020127	mknk2a (ENSEEEG00000020124)	csnk1g2a (ENSEEEG00000019777)	mfsd12a (ENSEEEG00000019746)	prrx1a (ENSEEEG00000019743)	kifap3b (ENSEEEG00000019739) #22	NIBAN1 (ENSEEEG00000019737) ##23	rnf2 (ENSEEEG00000019736)	ivns1abpb (ENSEEEG00000019727)	ENSEEEG00000019723	arpc5a (ENSEEEG00000019719)	pla2g4aa (ENSEEEG00000019312)	ptgs2a (ENSEEEG00000019298)	pdca (ENSEEEG00000019297) ##21	odr4 (ENSEEEG00000019296) #29	TPR (ENSEEEG00000018880) #28	prg4a (ENSEEEG00000018853) #27	ENSEEEG00000018709	dusp12 (ENSEEEG00000018703) #26	OLFML2B (ENSEEEG00000018702) #24	ENSEEEG00000018700
Channel catfish	MODERN SPECIES	8	ENSIPUG00000016576	katnal1 (ENSIPUG00000016551)	ENSIPUG00000016537	ENSIPUG00000016524	ENSIPUG00000016500	ENSIPUG00000016485	ENSIPUG00000016470	ENSIPUG00000016432	ENSIPUG00000016412	ENSIPUG00000016395	ENSIPUG00000016384	ENSIPUG00000016375	Csnk1g2 (ENSIPUG00000016316)	mfsd12a (ENSIPUG00000016251)	Prrx1 (ENSIPUG00000016228)	kifap3b (ENSIPUG00000016067) #22	ENSIPUG00000016042	msh5 (ENSIPUG00000016018)	RH11 (ENSIPUG00000016013)	ROBO1 (ENSIPUG00000015850)	robo2 (ENSIPUG00000015618)	ENSIPUG00000015562	ENSIPUG00000015551	ENSIPUG00000015481	stim1a (ENSIPUG00000015417)	Rhog (ENSIPUG00000015404)	ENSIPUG00000015385	ENSIPUG00000015338	ENSIPUG00000015316	ENSIPUG00000015304	ENSIPUG00000015284
Cyprinoidei	ANCESTRAL SPECIES	21	ENSGT01090000260100.B.b	ENSGT00940000158447	ENSGT00390000017498.b	ENSGT00940000153241.B.d	ENSGT00940000156474.a.a	ENSGT00940000156970.c.a	ENSGT00940000159656.a.b	ENSGT00940000161104	ENSGT00940000156577.b	ENSGT00940000157247.a.b	ENSGT00440000037733.e	ENSGT00940000158800.fb	ENSGT00390000006876	ENSGT00940000156470.u.b	ENSGT00390000005318.a.a.b	ENSGT00390000003574.b #22	ENSGT00940000154149.b.a.g.a ##23	ENSGT00940000154499	ENSGT00940000154654.a.b.g	ENSGT01030000234606.b.e.a	ENSGT00390000010743.a.b	ENSGT00940000156236.b ##21	ENSGT00390000012568 #29	ENSGT00730000111014.o.a #28	ENSGT00530000063751.a.b #27	ENSGT00940000166019.k.b	ENSGT01020000231030	ENSGT00930000151041 #26	ENSGT00940000157757.g.b #24	ENSGT00940000164640	ENSGT00940000178091
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	8	ENSGT00940000158447.w	ENSGT00940000153241.B.d.a	ENSGT00940000156474.a.a.m	ENSGT00940000156970.c.a	ENSGT00940000159656.a.b.b	ENSGT00940000161104.e	ENSGT00940000156577.b.c	ENSGT00940000157247.a.b.a	ENSGT00440000037733.e.a	ENSGT00940000158800.fb.b	ENSGT00390000006876.b	ENSGT00940000154587.a.b.r.b	ENSGT00940000156470.u.b.b.a.a	ENSGT00390000005318.a.a.b.e	ENSGT00940000159466.d.d.a	ENSGT00390000003574.b.c #22	ENSGT00940000154149.b.a.g.a.b ##23	ENSGT00940000154499.kb	ENSGT00940000155635.v.a	ENSGT00940000154654.a.b.g.a	ENSGT01030000234606.b.e.a.a	ENSGT00390000010743.a.b.a	ENSGT00940000156236.b.c ##21	ENSGT00390000012568.i #29	ENSGT00730000111014.o.a.d #28	ENSGT00530000063751.a.b.a #27	ENSGT00940000166019.k.b.b	ENSGT00930000151041.d #26	ENSGT00940000157757.g.b.c #24	ENSGT00940000164640.j	ENSGT00940000164178.eb
Cyprininae_a	ANCESTRAL SPECIES	65	ENSGT00940000158447.w	ENSGT00940000153241.B.d.a	ENSGT00940000156474.a.a.m	ENSGT00940000156970.c.a	ENSGT00940000159656.a.b.b	ENSGT00940000161104.e	ENSGT00940000156577.b.c	ENSGT00940000157247.a.b.a	ENSGT00440000037733.e.a	ENSGT00940000158800.fb.b	ENSGT00390000006876.b	ENSGT00940000154587.a.b.r.b	ENSGT00940000156470.u.b.b.a.a	ENSGT00390000005318.a.a.b.e	ENSGT00940000159466.d.d.a	ENSGT00390000003574.b.c #22	ENSGT00940000154149.b.a.g.a.b ##23	ENSGT00940000154499.kb	ENSGT00940000155635.v.a	ENSGT00940000154654.a.b.g.a	ENSGT01030000234606.b.e.a.a	ENSGT00390000010743.a.b.a	ENSGT00940000156236.b.c ##21	ENSGT00390000012568.i #29	ENSGT00730000111014.o.a.d #28	ENSGT00530000063751.a.b.a #27	ENSGT00940000166019.k.b.b	ENSGT00930000151041.d #26	ENSGT00940000157757.g.b.c #24	ENSGT00940000164640.j	ENSGT00390000012596.e.a.a
Golden-line barbel	MODERN SPECIES	120	zgc:161973 (ENSSGRG00000051483)	agxtb (ENSSGRG00000051491)	KIF1A (ENSSGRG00000051533)	ESPNL (ENSSGRG00000052112)	rab6bb (ENSSGRG00000052113)	aire (ENSSGRG00000052119)	amotl2b (ENSSGRG00000052122)	ENSSGRG00000052123	sap130b (ENSSGRG00000052129)	mllt1b (ENSSGRG00000052309)	znf414 (ENSSGRG00000052310)	mknk2a (ENSSGRG00000052314)	csnk1g2a (ENSSGRG00000052344)	mfsd12a (ENSSGRG00000052704)	prrx1a (ENSSGRG00000052732)	kifap3b (ENSSGRG00000052736) #22	ENSSGRG00000052750 ##23	rnf2 (ENSSGRG00000052753)	ivns1abpb (ENSSGRG00000052764)	arpc5a (ENSSGRG00000052797)	pla2g4aa (ENSSGRG00000052805)	ptgs2a (ENSSGRG00000053062)	pdca (ENSSGRG00000053134) ##21	odr4 (ENSSGRG00000053135) #29	TPR (ENSSGRG00000053144) #28	prg4a (ENSSGRG00000053163) #27	ENSSGRG00000053173	dusp12 (ENSSGRG00000053221) #26	OLFML2B (ENSSGRG00000053222) #24	ENSSGRG00000053223	agla (ENSSGRG00000053226)
Common carp reference	MODERN SPECIES	21	thap4 (ENSCCRG00000047678)	agxtb (ENSCCRG00000070674)	ENSCCRG00000041875	ENSCCRG00000052300	rab6bb (ENSCCRG00000053283)	aire (ENSCCRG00000052308)	amotl2b (ENSCCRG00000052311)	ENSCCRG00000034462	sap130b (ENSCCRG00000010106)	mllt1b (ENSCCRG00000070889)	znf414 (ENSCCRG00000073873)	mknk2a (ENSCCRG00000017949)	csnk1g2a (ENSCCRG00000018087)	mfsd12a (ENSCCRG00000062536)	prrx1a (ENSCCRG00000017974)	kifap3b (ENSCCRG00000031757) #22	ENSCCRG00000017838 ##23	rnf2 (ENSCCRG00000062486)	ivns1abpb (ENSCCRG00000017789)	arpc5a (ENSCCRG00000017777)	pla2g4aa (ENSCCRG00000024484)	ptgs2a (ENSCCRG00000024657)	pdca (ENSCCRG00000071415) ##21	odr4 (ENSCCRG00000014901) #29	TPR (ENSCCRG00000014978) #28	prg4a (ENSCCRG00000016984) #27	ENSCCRG00000017015	dusp12 (ENSCCRG00000016238) #26	ENSCCRG00000042467 #24	ENSCCRG00000042438	ENSCCRG00000063112
Cyprininae	ANCESTRAL SPECIES	103	ENSGT00940000158447.x	ENSGT00390000017498.b.a	ENSGT00940000153241.B.d.b	ENSGT00940000156474.a.a.n	ENSGT00940000159656.a.b.a	ENSGT00940000161104.f	ENSGT00940000156577.b.d.a.a	ENSGT00940000157247.a.b.b	ENSGT00440000037733.e.b	ENSGT00940000158800.fb.a	ENSGT00390000006876.a.a	ENSGT00940000154587.a.b.r.a	ENSGT00940000156470.u.b.a	ENSGT00390000005318.a.a.b.f	ENSGT00940000159466.d.d.b	ENSGT00390000003574.b.d #22	ENSGT00940000154149.b.a.g.a.a ##23	ENSGT00940000154499.jb	ENSGT00940000155635.v.b	ENSGT00940000154654.a.b.g.b	ENSGT01030000234606.b.e.a.b	ENSGT00390000010743.a.b.b	ENSGT00940000156236.b.d ##21	ENSGT00390000012568.j #29	ENSGT00730000111014.o.a.c #28	ENSGT00530000063751.a.b.b #27	ENSGT00940000166019.k.b.a	ENSGT01020000231030	ENSGT00930000151041.c #26	ENSGT00940000157757.g.b.d #24	ENSGT00940000164640.i
Goldfish	MODERN SPECIES	19	thap4 (ENSCARG00000017718)	zgc:161973 (ENSCARG00000017672)	agxtb (ENSCARG00000017409)	KIF1A (ENSCARG00000016941)	rab6bb (ENSCARG00000016881)	aire (ENSCARG00000016873)	amotl2b (ENSCARG00000016863)	ENSCARG00000016782	sap130b (ENSCARG00000014434)	mllt1b (ENSCARG00000014348)	znf414 (ENSCARG00000014337)	mknk2a (ENSCARG00000014238)	csnk1g2a (ENSCARG00000014185)	mfsd12a (ENSCARG00000014120)	prrx1a (ENSCARG00000014108)	kifap3b (ENSCARG00000013534) #22	ENSCARG00000013488	ENSCARG00000013462 ##23	rnf2 (ENSCARG00000013446)	ivns1abpb (ENSCARG00000013421)	arpc5a (ENSCARG00000013402)	pla2g4aa (ENSCARG00000011571)	ptgs2a (ENSCARG00000010793)	pdca (ENSCARG00000010761) ##21	odr4 (ENSCARG00000010697) #29	TPR (ENSCARG00000010379) #28	prg4a (ENSCARG00000010338) #27	ENSCARG00000010287	dusp12 (ENSCARG00000010268) #26	OLFML2B (ENSCARG00000010259) #24	ENSCARG00000010134
Cyprininae_a	ANCESTRAL SPECIES	4	ENSGT00940000158447.x	ENSGT00390000017498.b.a	ENSGT00940000153241.B.d.b	ENSGT00940000156474.a.a.n	ENSGT00940000159656.a.b.a	ENSGT00940000161104.f.a	ENSGT00940000156577.b.d.a.a	ENSGT00940000157247.a.b.b	ENSGT00440000037733.e.b	ENSGT00940000158800.fb.a	ENSGT00390000006876.a.a	ENSGT00940000154587.a.b.r.a	ENSGT00940000156470.u.b.a	ENSGT00390000005318.a.a.b.f	ENSGT00940000159466.d.d.b	ENSGT00390000003574.b.d #22	ENSGT00940000154149.b.a.g.a.a ##23	ENSGT00940000154499.jb	ENSGT00940000155635.v.b	ENSGT00940000154654.a.b.g.b	ENSGT01030000234606.b.e.a.b	ENSGT00390000010743.a.b.b	ENSGT00940000156236.b.d ##21	ENSGT00390000012568.j #29	ENSGT00730000111014.o.a.c #28	ENSGT00530000063751.a.b.b #27	ENSGT00940000166019.k.b.a	ENSGT01020000231030	ENSGT00930000151041.c #26	ENSGT00940000157757.g.b.d #24	ENSGT00940000164640.i
Common carp reference	MODERN SPECIES	29	thap4 (ENSCCRG00000066368)	zgc:161973 (ENSCCRG00000047683)	agxtb (ENSCCRG00000040907)	ENSCCRG00000052374	rab6bb (ENSCCRG00000059850)	aire (ENSCCRG00000052402)	amotl2b (ENSCCRG00000022478)	ENSCCRG00000052316	sap130b (ENSCCRG00000052327)	mllt1b (ENSCCRG00000010055)	znf414 (ENSCCRG00000022768)	mknk2a (ENSCCRG00000072905)	csnk1g2a (ENSCCRG00000017799)	mfsd12a (ENSCCRG00000018043)	prrx1a (ENSCCRG00000028241)	kifap3b (ENSCCRG00000071661) #22	ENSCCRG00000032181 ##23	rnf2 (ENSCCRG00000032189)	ivns1abpb (ENSCCRG00000032214)	arpc5a (ENSCCRG00000056012)	pla2g4aa (ENSCCRG00000032323)	ptgs2a (ENSCCRG00000032335)	pdca (ENSCCRG00000011887) ##21	odr4 (ENSCCRG00000011892) #29	TPR (ENSCCRG00000016797) #28	prg4a (ENSCCRG00000017392) #27	ENSCCRG00000058167	dusp12 (ENSCCRG00000042476) #26	ENSCCRG00000016245 #24	ENSCCRG00000016252	agla (ENSCCRG00000016392)
Golden-line barbel	MODERN SPECIES	955				KIF1A (ENSSGRG00000023442)	rab6bb (ENSSGRG00000023351)	aire (ENSSGRG00000023350)	amotl2b (ENSSGRG00000023349)	ENSSGRG00000023348	sap130b (ENSSGRG00000022560)	mllt1b (ENSSGRG00000022518)	znf414 (ENSSGRG00000022517)	mknk2a (ENSSGRG00000021602)	csnk1g2a (ENSSGRG00000021574)	mfsd12a (ENSSGRG00000021571)	prrx1a (ENSSGRG00000021550)	kifap3b (ENSSGRG00000021380) #22	ENSSGRG00000021372 ##23	rnf2 (ENSSGRG00000021361)	ENSSGRG00000021357	arpc5a (ENSSGRG00000021341)
Zebrafish	MODERN SPECIES	11	agxtb (ENSDARG00000018478)	KIF1A (ENSDARG00000062024)	ESPNL (ENSDARG00000093112)	rab6bb (ENSDARG00000031343)	aire (ENSDARG00000056784)	amotl2b (ENSDARG00000061948)	ENSDARG00000077201	sap130b (ENSDARG00000079352)	mllt1b (ENSDARG00000031709)	znf414 (ENSDARG00000079229)	mknk2a (ENSDARG00000011373)	csnk1g2a (ENSDARG00000005458)	mfsd12a (ENSDARG00000061908)	ENSDARG00000093680	prrx1a (ENSDARG00000033971)	kifap3b (ENSDARG00000006862) #22	NIBAN1 (ENSDARG00000023053) ##23	rnf2 (ENSDARG00000010381)	ivns1abpb (ENSDARG00000013946)	ENSDARG00000109615	ENSDARG00000113501	ENSDARG00000111218	ENSDARG00000111600	ENSDARG00000112109	ENSDARG00000113007	ENSDARG00000110969	ENSDARG00000111054	ENSDARG00000116868	ENSDARG00000112742	ENSDARG00000112714	ENSDARG00000109911