Salmoninae_a	ANCESTRAL SPECIES	103	ENSGT01030000235036	ENSGT00390000003015.c.d #9	ENSGT00940000166725.i #10	ENSGT01030000234931	ENSGT00510000048988 #11	ENSGT00940000157693.o #12	ENSGT00940000166530.c #13	ENSGT00730000111085.A.fb #14	ENSGT00950000182946.lb.b.k.a.a #15	ENSGT00530000063632.A #16	ENSGT00940000156259.a.a.c #17	ENSGT00940000155705.b.u #18	ENSGT00950000183190.a.a.a.a.a.a.b #19	ENSGT00950000183190.a.a.a.b.c #20	ENSGT00940000159466.e.b #21	ENSGT00390000003574.a.d #22	ENSGT00940000154149.b.a.g.b.c #23	ENSGT00940000155635.r #24	ENSGT01030000234606.b.e.b.g #26	ENSGT00390000010743.a.a.e #27	ENSGT00940000155117.f.a.h #28	ENSGT00940000155152.f.b.h #29	ENSGT00940000156725.e.a #30	ENSGT00940000158821.k #31	ENSGT00940000155446.g #33	ENSGT00390000007336.a.a.c #34	ENSGT00390000007029.e.a.b #35	ENSGT00940000157019.g.a.h #36	ENSGT00940000160748.a.d	ENSGT00390000000263.b #37	ENSGT00950000183070.a.a.mb.b.f
Salmo	ANCESTRAL SPECIES	64	ENSGT00390000014984.q #7	ENSGT00620000088018.v.a #8	ENSGT00390000003015.c.d #9	ENSGT00940000166725.i #10	ENSGT00510000048988 #11	ENSGT00940000157693.o #12	ENSGT00940000166530.c #13	ENSGT00730000111085.A.fb #14	ENSGT00950000182946.lb.b.k.a.a #15	ENSGT00530000063632.A #16	ENSGT00940000156259.a.a.c #17	ENSGT00940000155705.b.u #18	ENSGT00950000183190.a.a.a.a.a.a.b #19	ENSGT00950000183190.a.a.a.b.c #20	ENSGT00940000159466.e.b #21	ENSGT00390000003574.a.d #22	ENSGT00940000154149.b.a.g.b.c #23	ENSGT00940000155635.r #24	ENSGT00940000154654.a.b.e #25	ENSGT01030000234606.b.e.b.g #26	ENSGT00390000010743.a.a.e #27	ENSGT00940000155117.f.a.h #28	ENSGT00940000155152.f.b.h #29	ENSGT00940000156725.e.a #30	ENSGT00940000158821.k #31	ENSGT00940000155446.g #33	ENSGT00390000007336.a.a.c #34	ENSGT00390000007029.e.a.b #35	ENSGT00940000157019.g.a.h #36	ENSGT00390000000263.b #37	ENSGT00950000183070.a.a.mb.b.f
River trout	MODERN SPECIES	33	ebna1bp2 (ENSSTUG00000008168) #7	CFAP57 (ENSSTUG00000008107) #8	TMEM125 (ENSSTUG00000008099) #9	ap1m3 (ENSSTUG00000006631) #10	C1orf210 (ENSSTUG00000006574) #11	tie1 (ENSSTUG00000005979) #12	mpl (ENSSTUG00000005928) #13	prpf38a (ENSSTUG00000005917) #14	ENSSTUG00000005913 #15	pomgnt1 (ENSSTUG00000005824) #16	PIK3R3 (ENSSTUG00000004411) #17	MAST2 (ENSSTUG00000004246) #18	ENSSTUG00000004176 #19	ENSSTUG00000004149 #20	prrx1b (ENSSTUG00000004069) #21	kifap3a (ENSSTUG00000002766) #22	niban1a (ENSSTUG00000002614) #23	ivns1abpa (ENSSTUG00000002544) #24	arpc5b (ENSSTUG00000002513) #25	PLA2G4A (ENSSTUG00000001927) #26	ptgs2b (ENSSTUG00000001191) #27	b3galt2 (ENSSTUG00000001121) #28	crb1 (ENSSTUG00000001111) #29	nek7 (ENSSTUG00000000907) #30	lhx9 (ENSSTUG00000000861) #31	ENSSTUG00000000854 #32	DENND1B (ENSSTUG00000000837) #33	ABHD8 (ENSSTUG00000000828) #34	dda1 (ENSSTUG00000000812) #35	ANO8 (ENSSTUG00000000647) #36	pde6d (ENSSTUG00000000605) #37
Atlantic salmon	MODERN SPECIES	15	TMEM125 (ENSSSAG00000119454) #9	C1orf210 (ENSSSAG00000079365) #11	ap1m3 (ENSSSAG00000045323) #10	tie1 (ENSSSAG00000079214) #12	TPOR (ENSSSAG00000079193) #13	pr38a (ENSSSAG00000079192) #14	ENSSSAG00000079187 #15	ENSSSAG00000079173 #16	ENSSSAG00000110126	ENSSSAG00000097280	ENSSSAG00000120618 #17	ENSSSAG00000090366 ##32	ENSSSAG00000078806 #19	ENSSSAG00000078794 #20	ENSSSAG00000113189 #21	ENSSSAG00000077689 #22	ENSSSAG00000111849	ivns1abpa (ENSSSAG00000077563) #24	ENSSSAG00000076307 #26	ptgs2b (ENSSSAG00000054742) #27	ENSSSAG00000090467 #28	ENSSSAG00000077019 #29	nek7 (ENSSSAG00000077057) #30	LHX9 (ENSSSAG00000077539) #31	DENND1B (ENSSSAG00000076291) #33	ENSSSAG00000076289 #34	ENSSSAG00000076064 #36	pde6d (ENSSSAG00000076055) #37	PHB2 (ENSSSAG00000075693)	ENSSSAG00000075676	ENSSSAG00000082287
Oncorhynchus	ANCESTRAL SPECIES		ENSGT01030000235036	ENSGT00390000003015.c.d #9	ENSGT00940000166725.i #10	ENSGT01030000234931	ENSGT00510000048988 #11	ENSGT00940000157693.o #12	ENSGT00940000166530.c #13	ENSGT00730000111085.A.fb #14	ENSGT00530000063632.A #16	ENSGT00940000156259.a.a.c #17	ENSGT00940000155705.b.u #18	ENSGT00950000183190.a.a.a.a.a.a.b #19	ENSGT00950000183190.a.a.a.b.c #20	ENSGT00940000159466.e.b #21	ENSGT01010000229774	ENSGT00390000003574.a.d #22	ENSGT00940000154149.b.a.g.b.c #23	ENSGT00940000155635.r #24	ENSGT01030000234606.b.e.b.g #26	ENSGT00390000010743.a.a.e #27	ENSGT00940000155117.f.a.h #28	ENSGT00940000155152.f.b.h #29	ENSGT00940000156725.e.a #30	ENSGT00940000158821.k #31	ENSGT00940000155446.g #33	ENSGT00390000007336.a.a.c #34	ENSGT00390000007029.e.a.b #35	ENSGT00940000157019.g.a.h #36	ENSGT00940000160748.a.d	ENSGT00390000000263.b #37	ENSGT00950000183070.a.a.mb.b.f
Oncorhynchus_a	ANCESTRAL SPECIES		ENSGT00390000014984.q #7	ENSGT00620000088018.v.a #8	ENSGT01030000235036	ENSGT00390000003015.c.d #9	ENSGT00940000166725.i #10	ENSGT01030000234931	ENSGT00940000157693.o #12	ENSGT00940000166530.c #13	ENSGT00730000111085.A.fb #14	ENSGT00530000063632.A #16	ENSGT00940000156259.a.a.c #17	ENSGT00940000155705.b.u #18	ENSGT00950000183190.a.a.a.a.a.a.b #19	ENSGT00940000159466.e.b #21	ENSGT01010000229774	ENSGT00390000003574.a.d #22	ENSGT00940000154149.b.a.g.b.c #23	ENSGT00940000155635.r #24	ENSGT01030000234606.b.e.b.g #26	ENSGT00390000010743.a.a.e #27	ENSGT00940000155152.f.b.h #29	ENSGT00940000156725.e.a #30	ENSGT00940000158821.k #31	ENSGT00940000155446.g #33	ENSGT00390000007336.a.a.c #34	ENSGT00390000007029.e.a.b #35	ENSGT00940000157019.g.a.h #36	ENSGT00940000160748.a.d	ENSGT00390000000263.b #37	ENSGT00950000183070.a.a.mb.b.f	ENSGT00980000198724
Coho salmon	MODERN SPECIES	1	ebna1bp2 (ENSOKIG00005004146) #7	CFAP57 (ENSOKIG00005004165) #8	ENSOKIG00005004187	TMEM125 (ENSOKIG00005004199) #9	ap1m3 (ENSOKIG00005004338) #10	ENSOKIG00005004696	tie1 (ENSOKIG00005004729) #12	mpl (ENSOKIG00005005163) #13	prpf38a (ENSOKIG00005005206) #14	pomgnt1 (ENSOKIG00005005244) #16	ENSOKIG00005005364 #17	MAST2 (ENSOKIG00005006912) #18	ENSOKIG00005008304 #19	PRRX1 (ENSOKIG00005008357) #21	ENSOKIG00005008408	KIFAP3 (ENSOKIG00005008466) #22	ENSOKIG00005008659	NIBAN1 (ENSOKIG00005008670) #23	ivns1abpa (ENSOKIG00005008870) #24	ENSOKIG00005008894 ##32	PLA2G4A (ENSOKIG00005008974) #26	ptgs2b (ENSOKIG00005010606) #27	ENSOKIG00005010807	ENSOKIG00005010819 #29	LHX9 (ENSOKIG00005010851) #31	DENND1B (ENSOKIG00005011000) #33	ABHD8 (ENSOKIG00005011045) #34	DDA1 (ENSOKIG00005011055) #35	ANO8 (ENSOKIG00005011092) #36	nr2f6b (ENSOKIG00005011192)	ENSOKIG00005011206
Chinook salmon	MODERN SPECIES		cfap144 (ENSOTSG00005013038)	ebna1bp2 (ENSOTSG00005013039) #7	CFAP57 (ENSOTSG00005013041) #8	ENSOTSG00005013047	TMEM125 (ENSOTSG00005013048) #9	ap1m3 (ENSOTSG00005013055) #10	ENSOTSG00005014171	tie1 (ENSOTSG00005014172) #12	mpl (ENSOTSG00005014182) #13	prpf38a (ENSOTSG00005014183) #14	pomgnt1 (ENSOTSG00005014187) #16	ENSOTSG00005014210	ENSOTSG00005014213 #17	ENSOTSG00005014483 #19	prrx1b (ENSOTSG00005014500) #21	kifap3a (ENSOTSG00005014519) #22	niban1a (ENSOTSG00005023747) #23	ivns1abpa (ENSOTSG00005023749) #24	PLA2G4A (ENSOTSG00005023754) #26	ptgs2b (ENSOTSG00005023806) #27	ENSOTSG00005026809	ENSOTSG00005026811	crb1 (ENSOTSG00005026812) #29	nek7 (ENSOTSG00005026827) #30	lhx9 (ENSOTSG00005028017) #31	DENND1B (ENSOTSG00005028022) #33	ABHD8 (ENSOTSG00005028032) #34	dda1 (ENSOTSG00005028035) #35	ANO8 (ENSOTSG00005028038) #36	nr2f6b (ENSOTSG00005028040)	pde6d (ENSOTSG00005028041) #37
Rainbow trout	MODERN SPECIES	22	EBNA1BP2 (ENSOMYG00000004302) #7	CFAP57 (ENSOMYG00000004476) #8	TMEM125 (ENSOMYG00000052670) #9	ap1m3 (ENSOMYG00000004877) #10	C1orf210 (ENSOMYG00000005222) #11	tie1 (ENSOMYG00000005480) #12	mpl (ENSOMYG00000005603) #13	prpf38a (ENSOMYG00000005627) #14	POMGNT1 (ENSOMYG00000005992) #16	ENSOMYG00000007606 #17	MAST2 (ENSOMYG00000009424) #18	ENSOMYG00000009687 #19	ENSOMYG00000009726 #20	ENSOMYG00000031234 #21	ENSOMYG00000009797	ENSOMYG00000009964 #22	ENSOMYG00000056400	ENSOMYG00000010134 #23	ENSOMYG00000056789 ##32	ivns1abpa (ENSOMYG00000010178) #24	ENSOMYG00000010353 #26	ptgs2b (ENSOMYG00000010634) #27	ENSOMYG00000071691 #28	ENSOMYG00000011730 #29	nek7 (ENSOMYG00000054062) #30	ENSOMYG00000054799	ENSOMYG00000050036	ENSOMYG00000011779 #31	ENSOMYG00000074033	DENND1B (ENSOMYG00000052019) #33	ABHD8 (ENSOMYG00000011925) #34