Murinae	ANCESTRAL SPECIES	10	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #10	ENSGT00950000182825.A.a.b.a.b.a.b.a.b ##10	ENSGT00950000182825.A.a.b.a.b.a.b.b ##10	ENSGT00390000007809.a #11	ENSGT00940000161132 #12	ENSGT00940000161665 #13	ENSGT00940000156707 #14	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B #31	ENSGT00940000162388.A #32	ENSGT00940000164920 #33	ENSGT00940000162202.A #34	ENSGT00940000162202.B #35	ENSGT00940000162202.C ##34
Mus	ANCESTRAL SPECIES	11	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #10	ENSGT00950000182825.A.a.b.a.b.a.b.a.b ##10	ENSGT00950000182825.A.a.b.a.b.a.b.b ##10	ENSGT00390000007809.a #11	ENSGT00940000161132 #12	ENSGT00940000161665 #13	ENSGT00940000156707 #14	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B #31	ENSGT00940000162388.A #32	ENSGT00940000164920 #33	ENSGT00940000162202.A #34	ENSGT00940000162202.B #35	ENSGT00940000162121 #36
Mus_A	ANCESTRAL SPECIES	13	ENSGT00390000012132 #7	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.b.a.b ##10	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #10	ENSGT00390000007809.a #11	ENSGT00940000161132 #12	ENSGT00940000161665 #13	ENSGT00940000156707 #14	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B #31	ENSGT00940000162388.A #32	ENSGT00940000164920 #33	ENSGT00940000162202.A #34	ENSGT00940000162202.B #35	ENSGT00940000162121 #36
Ryukyu mouse	MODERN SPECIES	6	Troap (MGP_CAROLIEiJ_G0020256) #7	Prph (MGP_CAROLIEiJ_G0020255) #8	MGP_CAROLIEiJ_G0020254 #9	MGP_CAROLIEiJ_G0020253 #10	Lmbr1l (MGP_CAROLIEiJ_G0020252) #11	Dhh (MGP_CAROLIEiJ_G0020251) #12	Rhebl1 (MGP_CAROLIEiJ_G0020250) #13	Kmt2d (MGP_CAROLIEiJ_G0020249) #14	Prkag1 (MGP_CAROLIEiJ_G0020248) #15	Ddn (MGP_CAROLIEiJ_G0020247) #16	Wnt1 (MGP_CAROLIEiJ_G0020246) #17	Wnt10b (MGP_CAROLIEiJ_G0020245) #18	Arf3 (MGP_CAROLIEiJ_G0020244) #19	Fkbp11 (MGP_CAROLIEiJ_G0020243) #20	Ccdc65 (MGP_CAROLIEiJ_G0020242) #21	Rnd1 (MGP_CAROLIEiJ_G0020241) #22	Ddx23 (MGP_CAROLIEiJ_G0020240) #23	Cacnb3 (MGP_CAROLIEiJ_G0020239) #24	Adcy6 (MGP_CAROLIEiJ_G0020238) #25	Tex49 (MGP_CAROLIEiJ_G0020237) #26	Ccnt1 (MGP_CAROLIEiJ_G0020236) #27	Kansl2 (MGP_CAROLIEiJ_G0020235) #28	Or11m3 (MGP_CAROLIEiJ_G0020234) #29	Lalba (MGP_CAROLIEiJ_G0020233) #30	Or8s8 (MGP_CAROLIEiJ_G0020232) #31	Or8s10 (MGP_CAROLIEiJ_G0020231) #32	MGP_CAROLIEiJ_G0020230 #33	Or8s2 (MGP_CAROLIEiJ_G0020229) #34	Or8s5 (MGP_CAROLIEiJ_G0020228) #35	Zfp641 (MGP_CAROLIEiJ_G0020227) #36	H1f7 (MGP_CAROLIEiJ_G0020226) #37
Mus_B	ANCESTRAL SPECIES	12	ENSGT00390000012132 #7	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.b.a.b ##10	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #10	ENSGT00390000007809.a #11	ENSGT00940000161132 #12	ENSGT00940000161665 #13	ENSGT00940000156707 #14	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B #31	ENSGT00940000162388.A #32	ENSGT00940000164920 #33	ENSGT00940000162202.A #34	ENSGT00940000162202.B #35	ENSGT00940000159881.b
Mouse	MODERN SPECIES	6	Tuba1c (ENSMUSG00000043091) #10	Tuba1a (ENSMUSG00000072235) ##10	Gm49450 (ENSMUSG00000116358)	Tuba1b (ENSMUSG00000023004) #10	Lmbr1l (ENSMUSG00000022999) #11	Dhh (ENSMUSG00000023000) #12	Rhebl1 (ENSMUSG00000023755) #13	Kmt2d (ENSMUSG00000048154) #14	Prkag1 (ENSMUSG00000067713) #15	Ddn (ENSMUSG00000059213) #16	Wnt1 (ENSMUSG00000022997) #17	Wnt10b (ENSMUSG00000022996) #18	Arf3 (ENSMUSG00000051853) #19	Fkbp11 (ENSMUSG00000003355) #20	Ccdc65 (ENSMUSG00000003354) #21	Rnd1 (ENSMUSG00000054855) #22	Ddx23 (ENSMUSG00000003360) #23	Cacnb3 (ENSMUSG00000003352) #24	Adcy6 (ENSMUSG00000022994) #25	Tex49 (ENSMUSG00000022993) #26	Ccnt1 (ENSMUSG00000011960) #27	Kansl2 (ENSMUSG00000022992) #28	Or11m3 (ENSMUSG00000054036) #29	Lalba (ENSMUSG00000022991) #30	OR5BS1P (ENSMUSG00000108728)	Or8s8 (ENSMUSG00000032987) #31	Or8s10 (ENSMUSG00000063780) #32	Or8s2 (ENSMUSG00000056184) #34	Or8s5 (ENSMUSG00000051793) #35	Or8s16 (ENSMUSG00000062037)	Zfp641 (ENSMUSG00000022987) #36
Mus_C	ANCESTRAL SPECIES	17	ENSGT00390000012132 #7	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.b.a.b ##10	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #10	ENSGT00390000007809.a #11	ENSGT00940000161132 #12	ENSGT00940000161665 #13	ENSGT00940000156707 #14	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B #31	ENSGT00940000162388.A #32	ENSGT00940000164920 #33	ENSGT00940000162202.A #34	ENSGT00940000162202.B #35	ENSGT00940000159881.b
Steppe mouse	MODERN SPECIES	3092	C1ql4 (ENSMSIG00000002578)	Troap (ENSMSIG00000002521) #7	Prph (ENSMSIG00000002429) #8	Tuba1c (ENSMSIG00000002410) #10	Tuba1a (ENSMSIG00000002382) ##10	ENSMSIG00000002356 #10	Lmbr1l (ENSMSIG00000002200) #11	Dhh (ENSMSIG00000002172) #12	ENSMSIG00000002088 #13	Prkag1 (ENSMSIG00000001568) #15	Ddn (ENSMSIG00000001553) #16	Wnt1 (ENSMSIG00000001511) #17	Wnt10b (ENSMSIG00000001386) #18	Arf3 (ENSMSIG00000001320) #19	Ccdc65 (ENSMSIG00000001269) #21	Rnd1 (ENSMSIG00000001241) #22	Ddx23 (ENSMSIG00000001169) #23	Cacnb3 (ENSMSIG00000000901) #24	Adcy6 (ENSMSIG00000000695) #25	Ccnt1 (ENSMSIG00000000619) #27	Kansl2 (ENSMSIG00000000531) #28	Or11m3 (ENSMSIG00000000513) #29	Lalba (ENSMSIG00000000500) #30	ENSMSIG00000000476	Or8s8 (ENSMSIG00000000461) #31	Or8s2 (ENSMSIG00000000448) #34	Or8s5 (ENSMSIG00000000437) #35	ENSMSIG00000000424	ENSMSIG00000000412	Zfp641 (ENSMSIG00000000347) #36	H1f7 (ENSMSIG00000000314) #37
spretus	MODERN SPECIES	6	Dnajc22 (MGP_SPRETEiJ_G0021153)	C1ql4 (MGP_SPRETEiJ_G0021152)	Troap (MGP_SPRETEiJ_G0021151) #7	Prph (MGP_SPRETEiJ_G0021150) #8	Lmbr1l (MGP_SPRETEiJ_G0021149) #11	Dhh (MGP_SPRETEiJ_G0021148) #12	Rhebl1 (MGP_SPRETEiJ_G0021147) #13	Kmt2d (MGP_SPRETEiJ_G0021146) #14	Prkag1 (MGP_SPRETEiJ_G0021145) #15	Ddn (MGP_SPRETEiJ_G0021144) #16	Wnt1 (MGP_SPRETEiJ_G0021143) #17	Wnt10b (MGP_SPRETEiJ_G0021142) #18	Arf3 (MGP_SPRETEiJ_G0021141) #19	Fkbp11 (MGP_SPRETEiJ_G0021140) #20	Ccdc65 (MGP_SPRETEiJ_G0021139) #21	Rnd1 (MGP_SPRETEiJ_G0021138) #22	Ddx23 (MGP_SPRETEiJ_G0021137) #23	Cacnb3 (MGP_SPRETEiJ_G0021136) #24	Adcy6 (MGP_SPRETEiJ_G0021135) #25	Tex49 (MGP_SPRETEiJ_G0021134) #26	Ccnt1 (MGP_SPRETEiJ_G0021133) #27	Kansl2 (MGP_SPRETEiJ_G0021132) #28	Or11m3 (MGP_SPRETEiJ_G0021131) #29	Lalba (MGP_SPRETEiJ_G0021130) #30	Or8s8 (MGP_SPRETEiJ_G0021129) #31	Or8s10 (MGP_SPRETEiJ_G0021128) #32	MGP_SPRETEiJ_G0021127 #33	Or8s2 (MGP_SPRETEiJ_G0021126) #34	Or8s5 (MGP_SPRETEiJ_G0021125) #35	MGP_SPRETEiJ_G0021124	Zfp641 (MGP_SPRETEiJ_G0021123) #36
Shrew mouse	MODERN SPECIES	8	Troap (MGP_PahariEiJ_G0020259) #7	MGP_PahariEiJ_G0020258 #10	MGP_PahariEiJ_G0020256 ##10	MGP_PahariEiJ_G0020257 ##10	Lmbr1l (MGP_PahariEiJ_G0020255) #11	Dhh (MGP_PahariEiJ_G0020254) #12	Rhebl1 (MGP_PahariEiJ_G0020253) #13	Kmt2d (MGP_PahariEiJ_G0020252) #14	Prkag1 (MGP_PahariEiJ_G0020251) #15	Ddn (MGP_PahariEiJ_G0020250) #16	Wnt1 (MGP_PahariEiJ_G0020249) #17	Wnt10b (MGP_PahariEiJ_G0020248) #18	Arf3 (MGP_PahariEiJ_G0020247) #19	Fkbp11 (MGP_PahariEiJ_G0020246) #20	Ccdc65 (MGP_PahariEiJ_G0020245) #21	Rnd1 (MGP_PahariEiJ_G0020244) #22	Ddx23 (MGP_PahariEiJ_G0020243) #23	Cacnb3 (MGP_PahariEiJ_G0020242) #24	Adcy6 (MGP_PahariEiJ_G0020241) #25	Tex49 (MGP_PahariEiJ_G0020240) #26	Ccnt1 (MGP_PahariEiJ_G0020239) #27	Kansl2 (MGP_PahariEiJ_G0020238) #28	Or11m3 (MGP_PahariEiJ_G0020237) #29	Lalba (MGP_PahariEiJ_G0020236) #30	Or8s8 (MGP_PahariEiJ_G0020235) #31	Or8s10 (MGP_PahariEiJ_G0020234) #32	MGP_PahariEiJ_G0020233 #33	Or8s2 (MGP_PahariEiJ_G0020232) #34	Or8s5 (MGP_PahariEiJ_G0020231) #35	Zfp641 (MGP_PahariEiJ_G0020230) #36	H1f7 (MGP_PahariEiJ_G0020229) #37
Rat	MODERN SPECIES	17	Prph (ENSRNOG00000052880) #8	Tuba1c (ENSRNOG00000021438) #10	AC114446.1 (ENSRNOG00000059545)	Tuba1a (ENSRNOG00000053468) #10	Lmbr1l (ENSRNOG00000061607) #11	Dhh (ENSRNOG00000053675) #12	Rhebl1 (ENSRNOG00000054385) #13	Prkag1 (ENSRNOG00000070180) #15	Prkag1 (ENSRNOG00000061499) #14	Ddn (ENSRNOG00000059605) #16	Wnt1 (ENSRNOG00000061818) #17	Wnt10b (ENSRNOG00000061238) #18	Arf3 (ENSRNOG00000054775) #19	Fkbp11 (ENSRNOG00000070637) #20	Ccdc65 (ENSRNOG00000058916) #21	Rnd1 (ENSRNOG00000059857) #22	Ddx23 (ENSRNOG00000060154) #23	Cacnb3 (ENSRNOG00000054274) #24	Adcy6 (ENSRNOG00000054757) #25	Tex49 (ENSRNOG00000057264) #26	Ccnt1 (ENSRNOG00000053054) #27	Kansl2 (ENSRNOG00000060185) #28	Or11m3 (ENSRNOG00000031503) #29	Lalba (ENSRNOG00000010811) #30	ENSRNOG00000062462	Or8s8 (ENSRNOG00000070632) #31	Or8s10 (ENSRNOG00000067109) #32	Or8s2 (ENSRNOG00000033022) #34	Or8s5 (ENSRNOG00000064461) #35	Or8s16 (ENSRNOG00000067164) ##34	Zfp641 (ENSRNOG00000032447) #36