Rodentia	ANCESTRAL SPECIES	5	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #11	ENSGT00940000161132 #12	ENSGT00940000161665 #13	ENSGT00940000156707 #14	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B #31	ENSGT00940000162388.A #32	ENSGT00390000014843	ENSGT00940000162202.A #34	ENSGT00940000162202.B #35	ENSGT00940000162202.C ##34
Rodentia_B	ANCESTRAL SPECIES	3	ENSGT00940000160203 #10	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #11	ENSGT00940000161132 #12	ENSGT00940000161665 #13	ENSGT00940000156707 #14	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B #31	ENSGT00940000162388.A #32	ENSGT00940000164920 #33	ENSGT00940000162202.A #34	ENSGT00940000162202.B #35	ENSGT00940000162202.C ##34
Myomorpha	ANCESTRAL SPECIES	2	ENSGT00940000160203 #10	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #11	ENSGT00940000161132 #12	ENSGT00940000161665 #13	ENSGT00940000156707 #14	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B #31	ENSGT00940000162388.A #32	ENSGT00940000164920 #33	ENSGT00940000162202.A #34	ENSGT00940000162202.B #35	ENSGT00940000162202.C ##34
Muroidea	ANCESTRAL SPECIES	31	ENSGT00940000160203 #10	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #11	ENSGT00940000161132 #12	ENSGT00940000161665 #13	ENSGT00940000156707 #14	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B #31	ENSGT00940000162388.A #32	ENSGT00940000164920 #33	ENSGT00940000162202.A #34	ENSGT00940000162202.B #35	ENSGT00940000162202.C ##34
Muroidea_A	ANCESTRAL SPECIES	9	ENSGT00940000160203 #10	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #11	ENSGT00940000161132 #12	ENSGT00940000161665 #13	ENSGT00940000156707 #14	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B #31	ENSGT00940000162388.A #32	ENSGT00940000164920 #33	ENSGT00940000162202.A #34	ENSGT00940000162202.B #35	ENSGT00940000162202.C ##34
Murinae	ANCESTRAL SPECIES	10	ENSGT00940000160203 #10	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #11	ENSGT00940000161132 #12	ENSGT00940000161665 #13	ENSGT00940000156707 #14	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B #31	ENSGT00940000162388.A #32	ENSGT00940000164920 #33	ENSGT00940000162202.A #34	ENSGT00940000162202.B #35	ENSGT00940000162202.C ##34
Mus	ANCESTRAL SPECIES	11	ENSGT00940000160203 #10	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #11	ENSGT00940000161132 #12	ENSGT00940000161665 #13	ENSGT00940000156707 #14	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B #31	ENSGT00940000162388.A #32	ENSGT00940000164920 #33	ENSGT00940000162202.A #34	ENSGT00940000162202.B #35	ENSGT00940000162121 #37
Mus_A	ANCESTRAL SPECIES	13	ENSGT00390000012132 #9	ENSGT00940000160203 #10	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #11	ENSGT00940000161132 #12	ENSGT00940000161665 #13	ENSGT00940000156707 #14	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B #31	ENSGT00940000162388.A #32	ENSGT00940000164920 #33	ENSGT00940000162202.A #34	ENSGT00940000162202.B #35	ENSGT00940000162121 #37
Mus_B	ANCESTRAL SPECIES	12	ENSGT00390000012132 #9	ENSGT00940000160203 #10	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #11	ENSGT00940000161132 #12	ENSGT00940000161665 #13	ENSGT00940000156707 #14	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B #31	ENSGT00940000162388.A #32	ENSGT00940000164920 #33	ENSGT00940000162202.A #34	ENSGT00940000162202.B #35	ENSGT00940000159881.b #36
Mus_C	ANCESTRAL SPECIES	17	ENSGT00390000012132 #9	ENSGT00940000160203 #10	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #11	ENSGT00940000161132 #12	ENSGT00940000161665 #13	ENSGT00940000156707 #14	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B #31	ENSGT00940000162388.A #32	ENSGT00940000164920 #33	ENSGT00940000162202.A #34	ENSGT00940000162202.B #35	ENSGT00940000159881.b #36
spretus	MODERN SPECIES	6	Dnajc22 (MGP_SPRETEiJ_G0021153) #7	C1ql4 (MGP_SPRETEiJ_G0021152) #8	Troap (MGP_SPRETEiJ_G0021151) #9	Prph (MGP_SPRETEiJ_G0021150) #10	Lmbr1l (MGP_SPRETEiJ_G0021149) #11	Dhh (MGP_SPRETEiJ_G0021148) #12	Rhebl1 (MGP_SPRETEiJ_G0021147) #13	Kmt2d (MGP_SPRETEiJ_G0021146) #14	Prkag1 (MGP_SPRETEiJ_G0021145) #15	Ddn (MGP_SPRETEiJ_G0021144) #16	Wnt1 (MGP_SPRETEiJ_G0021143) #17	Wnt10b (MGP_SPRETEiJ_G0021142) #18	Arf3 (MGP_SPRETEiJ_G0021141) #19	Fkbp11 (MGP_SPRETEiJ_G0021140) #20	Ccdc65 (MGP_SPRETEiJ_G0021139) #21	Rnd1 (MGP_SPRETEiJ_G0021138) #22	Ddx23 (MGP_SPRETEiJ_G0021137) #23	Cacnb3 (MGP_SPRETEiJ_G0021136) #24	Adcy6 (MGP_SPRETEiJ_G0021135) #25	Tex49 (MGP_SPRETEiJ_G0021134) #26	Ccnt1 (MGP_SPRETEiJ_G0021133) #27	Kansl2 (MGP_SPRETEiJ_G0021132) #28	Or11m3 (MGP_SPRETEiJ_G0021131) #29	Lalba (MGP_SPRETEiJ_G0021130) #30	Or8s8 (MGP_SPRETEiJ_G0021129) #31	Or8s10 (MGP_SPRETEiJ_G0021128) #32	MGP_SPRETEiJ_G0021127 #33	Or8s2 (MGP_SPRETEiJ_G0021126) #34	Or8s5 (MGP_SPRETEiJ_G0021125) #35	MGP_SPRETEiJ_G0021124 #36	Zfp641 (MGP_SPRETEiJ_G0021123) #37
Steppe mouse	MODERN SPECIES	3092	C1ql4 (ENSMSIG00000002578) #8	Troap (ENSMSIG00000002521) #9	Prph (ENSMSIG00000002429) #10	Tuba1c (ENSMSIG00000002410)	Tuba1a (ENSMSIG00000002382)	ENSMSIG00000002356	Lmbr1l (ENSMSIG00000002200) #11	Dhh (ENSMSIG00000002172) #12	ENSMSIG00000002088 #13	Prkag1 (ENSMSIG00000001568) #15	Ddn (ENSMSIG00000001553) #16	Wnt1 (ENSMSIG00000001511) #17	Wnt10b (ENSMSIG00000001386) #18	Arf3 (ENSMSIG00000001320) #19	Ccdc65 (ENSMSIG00000001269) #21	Rnd1 (ENSMSIG00000001241) #22	Ddx23 (ENSMSIG00000001169) #23	Cacnb3 (ENSMSIG00000000901) #24	Adcy6 (ENSMSIG00000000695) #25	Ccnt1 (ENSMSIG00000000619) #27	Kansl2 (ENSMSIG00000000531) #28	Or11m3 (ENSMSIG00000000513) #29	Lalba (ENSMSIG00000000500) #30	ENSMSIG00000000476	Or8s8 (ENSMSIG00000000461) #31	Or8s2 (ENSMSIG00000000448) #34	Or8s5 (ENSMSIG00000000437) #35	ENSMSIG00000000424 #36	ENSMSIG00000000412 #36	Zfp641 (ENSMSIG00000000347) #37	H1f7 (ENSMSIG00000000314)
Mouse	MODERN SPECIES	6	Tuba1c (ENSMUSG00000043091)	Tuba1a (ENSMUSG00000072235)	Gm49450 (ENSMUSG00000116358)	Tuba1b (ENSMUSG00000023004)	Lmbr1l (ENSMUSG00000022999) #11	Dhh (ENSMUSG00000023000) #12	Rhebl1 (ENSMUSG00000023755) #13	Kmt2d (ENSMUSG00000048154) #14	Prkag1 (ENSMUSG00000067713) #15	Ddn (ENSMUSG00000059213) #16	Wnt1 (ENSMUSG00000022997) #17	Wnt10b (ENSMUSG00000022996) #18	Arf3 (ENSMUSG00000051853) #19	Fkbp11 (ENSMUSG00000003355) #20	Ccdc65 (ENSMUSG00000003354) #21	Rnd1 (ENSMUSG00000054855) #22	Ddx23 (ENSMUSG00000003360) #23	Cacnb3 (ENSMUSG00000003352) #24	Adcy6 (ENSMUSG00000022994) #25	Tex49 (ENSMUSG00000022993) #26	Ccnt1 (ENSMUSG00000011960) #27	Kansl2 (ENSMUSG00000022992) #28	Or11m3 (ENSMUSG00000054036) #29	Lalba (ENSMUSG00000022991) #30	OR5BS1P (ENSMUSG00000108728)	Or8s8 (ENSMUSG00000032987) #31	Or8s10 (ENSMUSG00000063780) #32	Or8s2 (ENSMUSG00000056184) #34	Or8s5 (ENSMUSG00000051793) #35	Or8s16 (ENSMUSG00000062037) #36	Zfp641 (ENSMUSG00000022987) #37
Ryukyu mouse	MODERN SPECIES	6	Troap (MGP_CAROLIEiJ_G0020256) #9	Prph (MGP_CAROLIEiJ_G0020255) #10	MGP_CAROLIEiJ_G0020254	MGP_CAROLIEiJ_G0020253	Lmbr1l (MGP_CAROLIEiJ_G0020252) #11	Dhh (MGP_CAROLIEiJ_G0020251) #12	Rhebl1 (MGP_CAROLIEiJ_G0020250) #13	Kmt2d (MGP_CAROLIEiJ_G0020249) #14	Prkag1 (MGP_CAROLIEiJ_G0020248) #15	Ddn (MGP_CAROLIEiJ_G0020247) #16	Wnt1 (MGP_CAROLIEiJ_G0020246) #17	Wnt10b (MGP_CAROLIEiJ_G0020245) #18	Arf3 (MGP_CAROLIEiJ_G0020244) #19	Fkbp11 (MGP_CAROLIEiJ_G0020243) #20	Ccdc65 (MGP_CAROLIEiJ_G0020242) #21	Rnd1 (MGP_CAROLIEiJ_G0020241) #22	Ddx23 (MGP_CAROLIEiJ_G0020240) #23	Cacnb3 (MGP_CAROLIEiJ_G0020239) #24	Adcy6 (MGP_CAROLIEiJ_G0020238) #25	Tex49 (MGP_CAROLIEiJ_G0020237) #26	Ccnt1 (MGP_CAROLIEiJ_G0020236) #27	Kansl2 (MGP_CAROLIEiJ_G0020235) #28	Or11m3 (MGP_CAROLIEiJ_G0020234) #29	Lalba (MGP_CAROLIEiJ_G0020233) #30	Or8s8 (MGP_CAROLIEiJ_G0020232) #31	Or8s10 (MGP_CAROLIEiJ_G0020231) #32	MGP_CAROLIEiJ_G0020230 #33	Or8s2 (MGP_CAROLIEiJ_G0020229) #34	Or8s5 (MGP_CAROLIEiJ_G0020228) #35	Zfp641 (MGP_CAROLIEiJ_G0020227) #37	H1f7 (MGP_CAROLIEiJ_G0020226)
Shrew mouse	MODERN SPECIES	8	Troap (MGP_PahariEiJ_G0020259) #9	MGP_PahariEiJ_G0020258	MGP_PahariEiJ_G0020256	MGP_PahariEiJ_G0020257	Lmbr1l (MGP_PahariEiJ_G0020255) #11	Dhh (MGP_PahariEiJ_G0020254) #12	Rhebl1 (MGP_PahariEiJ_G0020253) #13	Kmt2d (MGP_PahariEiJ_G0020252) #14	Prkag1 (MGP_PahariEiJ_G0020251) #15	Ddn (MGP_PahariEiJ_G0020250) #16	Wnt1 (MGP_PahariEiJ_G0020249) #17	Wnt10b (MGP_PahariEiJ_G0020248) #18	Arf3 (MGP_PahariEiJ_G0020247) #19	Fkbp11 (MGP_PahariEiJ_G0020246) #20	Ccdc65 (MGP_PahariEiJ_G0020245) #21	Rnd1 (MGP_PahariEiJ_G0020244) #22	Ddx23 (MGP_PahariEiJ_G0020243) #23	Cacnb3 (MGP_PahariEiJ_G0020242) #24	Adcy6 (MGP_PahariEiJ_G0020241) #25	Tex49 (MGP_PahariEiJ_G0020240) #26	Ccnt1 (MGP_PahariEiJ_G0020239) #27	Kansl2 (MGP_PahariEiJ_G0020238) #28	Or11m3 (MGP_PahariEiJ_G0020237) #29	Lalba (MGP_PahariEiJ_G0020236) #30	Or8s8 (MGP_PahariEiJ_G0020235) #31	Or8s10 (MGP_PahariEiJ_G0020234) #32	MGP_PahariEiJ_G0020233 #33	Or8s2 (MGP_PahariEiJ_G0020232) #34	Or8s5 (MGP_PahariEiJ_G0020231) #35	Zfp641 (MGP_PahariEiJ_G0020230) #37	H1f7 (MGP_PahariEiJ_G0020229)
Rat	MODERN SPECIES	17	Prph (ENSRNOG00000052880) #10	Tuba1c (ENSRNOG00000021438)	AC114446.1 (ENSRNOG00000059545)	Tuba1a (ENSRNOG00000053468)	Lmbr1l (ENSRNOG00000061607) #11	Dhh (ENSRNOG00000053675) #12	Rhebl1 (ENSRNOG00000054385) #13	Prkag1 (ENSRNOG00000070180) #15	Prkag1 (ENSRNOG00000061499) #14	Ddn (ENSRNOG00000059605) #16	Wnt1 (ENSRNOG00000061818) #17	Wnt10b (ENSRNOG00000061238) #18	Arf3 (ENSRNOG00000054775) #19	Fkbp11 (ENSRNOG00000070637) #20	Ccdc65 (ENSRNOG00000058916) #21	Rnd1 (ENSRNOG00000059857) #22	Ddx23 (ENSRNOG00000060154) #23	Cacnb3 (ENSRNOG00000054274) #24	Adcy6 (ENSRNOG00000054757) #25	Tex49 (ENSRNOG00000057264) #26	Ccnt1 (ENSRNOG00000053054) #27	Kansl2 (ENSRNOG00000060185) #28	Or11m3 (ENSRNOG00000031503) #29	Lalba (ENSRNOG00000010811) #30	ENSRNOG00000062462	Or8s8 (ENSRNOG00000070632) #31	Or8s10 (ENSRNOG00000067109) #32	Or8s2 (ENSRNOG00000033022) #34	Or8s5 (ENSRNOG00000064461) #35	Or8s16 (ENSRNOG00000067164) ##34	Zfp641 (ENSRNOG00000032447) #37
Cricetidae	ANCESTRAL SPECIES	10	ENSGT00940000160203 #10	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #11	ENSGT00940000161132 #12	ENSGT00940000161665 #13	ENSGT00940000156707 #14	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B #31	ENSGT00940000162388.A #32	ENSGT00940000162202.A #34	ENSGT00940000162202.B #35	ENSGT00940000162202.C ##34	ENSGT00940000162121 #37
Cricetidae_B	ANCESTRAL SPECIES	6	ENSGT00940000155969 #8	ENSGT00390000012132 #9	ENSGT00940000160203 #10	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #11	ENSGT00940000161132 #12	ENSGT00940000161665 #13	ENSGT00940000156707 #14	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B #31	ENSGT00940000162388.A #32	ENSGT00940000162202.A #34	ENSGT00940000162202.B #35	ENSGT00940000162202.C ##34	ENSGT00940000162121 #37
Prairie vole	MODERN SPECIES	2	ENSMOCG00000001429	Prph (ENSMOCG00000010753) #10	Tuba1c (ENSMOCG00000011887)	Lmbr1l (ENSMOCG00000012252) #11	Dhh (ENSMOCG00000000393) #12	Rhebl1 (ENSMOCG00000004742) #13	ENSMOCG00000016455 #14	ENSMOCG00000010694 #14	Prkag1 (ENSMOCG00000014481) #15	Ddn (ENSMOCG00000016200) #16	Wnt1 (ENSMOCG00000017789) #17	Wnt10b (ENSMOCG00000021764) #18	Arf3 (ENSMOCG00000020182) #19	Fkbp11 (ENSMOCG00000021965) #20	Ccdc65 (ENSMOCG00000000518) #21	Rnd1 (ENSMOCG00000015821) #22	Ddx23 (ENSMOCG00000018987) #23	Cacnb3 (ENSMOCG00000007254) #24	Adcy6 (ENSMOCG00000013100) #25	Tex49 (ENSMOCG00000022816) #26	Ccnt1 (ENSMOCG00000012712) #27	Kansl2 (ENSMOCG00000010801) #28	Lalba (ENSMOCG00000018652) #30	ENSMOCG00000009420 #33	ENSMOCG00000017621	Zfp641 (ENSMOCG00000019174) #37	ENSMOCG00000001245	ENSMOCG00000001175	Ccdc184 (ENSMOCG00000003788)	Asb8 (ENSMOCG00000017776)	Pfkm (ENSMOCG00000021333)
Northern American deer mouse	MODERN SPECIES	12	Troap (ENSPEMG00000009011) #9	Prph (ENSPEMG00000011347) #10	Tuba1c (ENSPEMG00000025359)	ENSPEMG00000029758	Dhh (ENSPEMG00000029701) #12	Rhebl1 (ENSPEMG00000018904) #13	ENSPEMG00000015247 #14	ENSPEMG00000015938 #14	Prkag1 (ENSPEMG00000015142) #15	Ddn (ENSPEMG00000010537) #16	Wnt1 (ENSPEMG00000024721) #17	Wnt10b (ENSPEMG00000015297) #18	Arf3 (ENSPEMG00000028616) #19	Fkbp11 (ENSPEMG00000009775) #20	Ccdc65 (ENSPEMG00000007520) #21	Rnd1 (ENSPEMG00000014224) #22	Ddx23 (ENSPEMG00000011305) #23	Cacnb3 (ENSPEMG00000014805) #24	Adcy6 (ENSPEMG00000009690) #25	Tex49 (ENSPEMG00000000495) #26	Ccnt1 (ENSPEMG00000016743) #27	Kansl2 (ENSPEMG00000008795) #28	Or11m3 (ENSPEMG00000024651) #29	Lalba (ENSPEMG00000007983) #30	ENSPEMG00000029296	Or8s8 (ENSPEMG00000030973) #31	Or8s10 (ENSPEMG00000027490) #32	ENSPEMG00000028993	Or8s2 (ENSPEMG00000026284) #34	Or8s5 (ENSPEMG00000026513) #35	ENSPEMG00000012906 ##34
Cricetinae	ANCESTRAL SPECIES	3	ENSGT00940000160203 #10	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #11	ENSGT00940000161132 #12	ENSGT00940000161665 #13	ENSGT00940000156707 #14	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B #31	ENSGT00940000162388.A #32	ENSGT00940000164920 #33	ENSGT00940000162202.A #34	ENSGT00940000162202.B #35	ENSGT00940000162121 #37
Golden Hamster	MODERN SPECIES	626	C1ql4 (ENSMAUG00000017527) #8	Troap (ENSMAUG00000015646) #9	Prph (ENSMAUG00000015253) #10	Lmbr1l (ENSMAUG00000014206) #11	Dhh (ENSMAUG00000013999) #12	Rhebl1 (ENSMAUG00000013128) #13	ENSMAUG00000012521 #14	ENSMAUG00000012028 #14	Prkag1 (ENSMAUG00000011761) #15	Ddn (ENSMAUG00000011464) #16	Wnt1 (ENSMAUG00000012154) #17	Wnt10b (ENSMAUG00000012082) #18	Arf3 (ENSMAUG00000011928) #19	Fkbp11 (ENSMAUG00000015766) #20	Ccdc65 (ENSMAUG00000015430) #21	Rnd1 (ENSMAUG00000015221) #22	Ddx23 (ENSMAUG00000012336) #23	Cacnb3 (ENSMAUG00000012005) #24	Adcy6 (ENSMAUG00000011342) #25	Tex49 (ENSMAUG00000010854) #26	Ccnt1 (ENSMAUG00000015960) #27	Kansl2 (ENSMAUG00000015668) #28	Lalba (ENSMAUG00000013490) #30	ENSMAUG00000012783 #33	Or8s2 (ENSMAUG00000015201) #34	Or8s16 (ENSMAUG00000011283) #36	Zfp641 (ENSMAUG00000010993) #37	H1f7 (ENSMAUG00000010839)	ENSMAUG00000014007	ENSMAUG00000019216	Ccdc184 (ENSMAUG00000010780)
Chinese hamster chok1gshd	MODERN SPECIES	1	Prph (ENSCGRG00001006972) #10	TUBA1C (ENSCGRG00001011520)	ENSCGRG00001007551	ENSCGRG00001011667	Lmbr1l (ENSCGRG00001008575) #11	Dhh (ENSCGRG00001012548) #12	Rhebl1 (ENSCGRG00001005736) #13	Kmt2d (ENSCGRG00001004692) #14	Prkag1 (ENSCGRG00001003063) #15	Ddn (ENSCGRG00001004300) #16	Wnt1 (ENSCGRG00001003166) #17	Wnt10b (ENSCGRG00001004015) #18	Arf3 (ENSCGRG00001004437) #19	Fkbp11 (ENSCGRG00001012678) #20	Ccdc65 (ENSCGRG00001014624) #21	Rnd1 (ENSCGRG00001004988) #22	Ddx23 (ENSCGRG00001015090) #23	Cacnb3 (ENSCGRG00001007469) #24	Adcy6 (ENSCGRG00001002443) #25	Tex49 (ENSCGRG00001002641) #26	Ccnt1 (ENSCGRG00001010472) #27	Kansl2 (ENSCGRG00001007756) #28	Or11m3 (ENSCGRG00001010245) #29	Lalba (ENSCGRG00001004333) #30	ENSCGRG00001004394	Or8s8 (ENSCGRG00001010259) #31	Or8s10 (ENSCGRG00001009319) #32	Or8s2 (ENSCGRG00001008762) #34	Or8s5 (ENSCGRG00001007209) #35	Zfp641 (ENSCGRG00001008450) #37	H1f7 (ENSCGRG00001006632)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1666				Lmbr1l (ENSNGAG00000000187) #11	Dhh (ENSNGAG00000018490) #12	Rhebl1 (ENSNGAG00000015540) #13	ENSNGAG00000012838 #14	ENSNGAG00000012125 #14	Prkag1 (ENSNGAG00000012811) #15	Ddn (ENSNGAG00000008326) #16	Wnt1 (ENSNGAG00000007571) #17	Wnt10b (ENSNGAG00000004862) #18	Arf3 (ENSNGAG00000015800) #19	ENSNGAG00000015440 #20	Ccdc65 (ENSNGAG00000008161) #21	Rnd1 (ENSNGAG00000001259) #22	Ddx23 (ENSNGAG00000019018) #23	Cacnb3 (ENSNGAG00000017756) #24	Adcy6 (ENSNGAG00000010902) #25	Tex49 (ENSNGAG00000008742) #26	Ccnt1 (ENSNGAG00000004672) #27	Kansl2 (ENSNGAG00000001029) #28	Or11m3 (ENSNGAG00000018584) #29	Lalba (ENSNGAG00000019393) #30	ENSNGAG00000014255 #33
Lesser Egyptian jerboa	MODERN SPECIES	157	Tuba1c (ENSJJAG00000010823)	Tuba1a (ENSJJAG00000010205)	Tuba1b (ENSJJAG00000003271)	ENSJJAG00000000483 #11	Dhh (ENSJJAG00000000231) #12	ENSJJAG00000023273 #14	ENSJJAG00000023190	ENSJJAG00000021738 #14	Prkag1 (ENSJJAG00000021260) #15	Ddn (ENSJJAG00000020419) #16	Wnt1 (ENSJJAG00000019856) #17	Wnt10b (ENSJJAG00000019751) #18	Arf3 (ENSJJAG00000019531) #19	Fkbp11 (ENSJJAG00000019024) #20	Ccdc65 (ENSJJAG00000018310) #21	Rnd1 (ENSJJAG00000018029) #22	Ddx23 (ENSJJAG00000018994) #23	Cacnb3 (ENSJJAG00000017876) #24	Adcy6 (ENSJJAG00000016023) #25	Tex49 (ENSJJAG00000014955) #26	Ccnt1 (ENSJJAG00000014633) #27	Kansl2 (ENSJJAG00000012644) #28	ENSJJAG00000013730	Lalba (ENSJJAG00000011329) #30	ENSJJAG00000003638 #33	ENSJJAG00000001609 ##34	Zfp641 (ENSJJAG00000023912) #37	ENSJJAG00000014189	ENSJJAG00000023686	Ccdc184 (ENSJJAG00000014181)	ENSJJAG00000023643
Kangaroo rat	MODERN SPECIES	361	Prph (ENSDORG00000004920) #10	Tuba1c (ENSDORG00000015065)	Tuba1a (ENSDORG00000006812)	ENSDORG00000000156	ENSDORG00000008221 #11	Dhh (ENSDORG00000024818) #12	Rhebl1 (ENSDORG00000006513) #13	ENSDORG00000027776 #14	ENSDORG00000024758 #14	Prkag1 (ENSDORG00000006505) #15	Ddn (ENSDORG00000028862) #16	Wnt1 (ENSDORG00000007735) #17	Wnt10b (ENSDORG00000010403) #18	Arf3 (ENSDORG00000024681) #19	Ccdc65 (ENSDORG00000012748) #21	Rnd1 (ENSDORG00000023400) #22	Ddx23 (ENSDORG00000012659) #23	Cacnb3 (ENSDORG00000012657) #24	Adcy6 (ENSDORG00000005171) #25	Tex49 (ENSDORG00000023756) #26	Ccnt1 (ENSDORG00000002854) #27	Kansl2 (ENSDORG00000001180) #28	Lalba (ENSDORG00000009838) #30	ENSDORG00000002609 #33	ENSDORG00000025213 ##34	Zfp641 (ENSDORG00000011810) #37	ENSDORG00000027881	ENSDORG00000027511	Ccdc184 (ENSDORG00000000096)	Asb8 (ENSDORG00000027268)	Pfkm (ENSDORG00000000094)
Rodentia_A	ANCESTRAL SPECIES	4	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b.b	ENSGT00390000007809.a #11	ENSGT00940000161132 #12	ENSGT00940000161665 #13	ENSGT00940000156707 #14	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B #31	ENSGT00940000159881.a.a.b ##36	ENSGT00390000014843	ENSGT00940000162202.A #34	ENSGT00940000162202.B #35	ENSGT00940000162202.C ##34
Hystricomorpha	ANCESTRAL SPECIES	9	ENSGT00940000160203 #10	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #11	ENSGT00940000161132 #12	ENSGT00940000161665 #13	ENSGT00940000156707 #14	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B #31	ENSGT00940000159881.a.a.b ##36	ENSGT00390000014843	ENSGT00940000162202.A #34	ENSGT00940000162202.B #35	ENSGT00940000162121 #37
Naked mole-rat female	MODERN SPECIES	8	ENSHGLG00000007474	TUBA1B (ENSHGLG00000036029)	ENSHGLG00000046022	LMBR1L (ENSHGLG00000014791) #11	DHH (ENSHGLG00000034254) #12	RHEBL1 (ENSHGLG00000013261) #13	ENSHGLG00000050567 #14	PRKAG1 (ENSHGLG00000003937) #15	DDN (ENSHGLG00000004151) #16	WNT1 (ENSHGLG00000004305) #17	WNT10B (ENSHGLG00000005760) #18	ARF3 (ENSHGLG00000050677) #19	FKBP11 (ENSHGLG00000008146) #20	CCDC65 (ENSHGLG00000003786) #21	ENSHGLG00000048199	RND1 (ENSHGLG00000004112) #22	DDX23 (ENSHGLG00000004292) #23	CACNB3 (ENSHGLG00000007792) #24	ADCY6 (ENSHGLG00000004662) #25	TEX49 (ENSHGLG00000007195) #26	ENSHGLG00000003361 #27	ENSHGLG00000003714 #28	ENSHGLG00000033115	ENSHGLG00000050339	ENSHGLG00000004311 #30	OR5BS1P (ENSHGLG00000042484)	ENSHGLG00000020586 ##36	ENSHGLG00000020517 #31	ENSHGLG00000047106	ENSHGLG00000036300 #34	ENSHGLG00000034108 #35
Hystricomorpha_a	ANCESTRAL SPECIES	7	ENSGT00390000012132 #9	ENSGT00940000160203 #10	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #11	ENSGT00940000161132 #12	ENSGT00940000161665 #13	ENSGT00940000156707 #14	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B #31	ENSGT00940000159881.a.a.b ##36	ENSGT00940000164920 #33	ENSGT00390000014843	ENSGT00940000162202.A #34	ENSGT00940000162202.B #35
Hystricomorpha_b	ANCESTRAL SPECIES	78	ENSGT00940000155969 #8	ENSGT00390000012132 #9	ENSGT00940000160203 #10	ENSGT00950000182825.A.a.b.a.b.a.b.b.a	ENSGT00390000007809.a #11	ENSGT00940000161132 #12	ENSGT00940000161665 #13	ENSGT00940000156707 #14	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808.c #28	ENSGT00940000161726 #30	ENSGT00940000164920 #33	ENSGT00390000014843	ENSGT00940000162202.A #34	ENSGT00940000162202.B #35	ENSGT00940000162121 #37	ENSGT01100000263574.a	ENSGT00390000002978	ENSGT00940000159366
Long-tailed chinchilla	MODERN SPECIES	207	ENSCLAG00000004426 #7	TROAP (ENSCLAG00000003387) #9	PRPH (ENSCLAG00000003332) #10	ENSCLAG00000004794	LMBR1L (ENSCLAG00000004048) #11	DHH (ENSCLAG00000003629) #12	RHEBL1 (ENSCLAG00000002358) #13	KMT2D (ENSCLAG00000003665) #14	PRKAG1 (ENSCLAG00000003459) #15	DDN (ENSCLAG00000003076) #16	WNT1 (ENSCLAG00000002943) #17	WNT10B (ENSCLAG00000002817) #18	ARF3 (ENSCLAG00000003101) #19	ENSCLAG00000003008 #20	CCDC65 (ENSCLAG00000002533) #21	RND1 (ENSCLAG00000003094) #22	DDX23 (ENSCLAG00000002986) #23	CACNB3 (ENSCLAG00000002138) #24	ADCY6 (ENSCLAG00000003898) #25	TEX49 (ENSCLAG00000003509) #26	CCNT1 (ENSCLAG00000003430) #27	ENSCLAG00000003022 #28	LALBA (ENSCLAG00000002878) #30	ENSCLAG00000017542 #31	C12orf54 (ENSCLAG00000002462)	ENSCLAG00000017498 #34	ENSCLAG00000002661 #35	ZNF641 (ENSCLAG00000002291) #37	OR10AD1 (ENSCLAG00000002006)	CCDC184 (ENSCLAG00000017612)	ASB8 (ENSCLAG00000003759)
Degu	MODERN SPECIES	141	ENSODEG00000004276 #9	PRPH (ENSODEG00000004229) #10	ENSODEG00000004198	LMBR1L (ENSODEG00000004152) #11	DHH (ENSODEG00000004129) #12	RHEBL1 (ENSODEG00000004107) #13	ENSODEG00000004083 #14	ENSODEG00000004064 #14	ENSODEG00000004046 #15	DDN (ENSODEG00000004034) #16	WNT1 (ENSODEG00000004027) #17	WNT10B (ENSODEG00000004020) #18	ARF3 (ENSODEG00000004009) #19	FKBP11 (ENSODEG00000003672) #20	CCDC65 (ENSODEG00000003640) #21	RND1 (ENSODEG00000003618) #22	DDX23 (ENSODEG00000003592) #23	CACNB3 (ENSODEG00000003562) #24	ADCY6 (ENSODEG00000003474) #25	ENSODEG00000003445	TEX49 (ENSODEG00000003431) #26	ENSODEG00000003425 #27	ENSODEG00000003381 #28	LALBA (ENSODEG00000003342) #30	ENSODEG00000003309 #33	ENSODEG00000003293 #34	ZNF641 (ENSODEG00000003266) #37	ENSODEG00000003244	ENSODEG00000003231	CCDC184 (ENSODEG00000019270)	ASB8 (ENSODEG00000004323)
Guinea pig	MODERN SPECIES	9	TROAP (ENSCPOG00000014679) #9	PRPH (ENSCPOG00000014881) #10	ENSCPOG00000031519	TUBA1B (ENSCPOG00000039484)	LMBR1L (ENSCPOG00000002999) #11	DHH (ENSCPOG00000002257) #12	RHEBL1 (ENSCPOG00000002998) #13	KMT2D (ENSCPOG00000002973) #14	PRKAG1 (ENSCPOG00000002966) #15	DDN (ENSCPOG00000002960) #16	WNT1 (ENSCPOG00000024490) #17	WNT10B (ENSCPOG00000035034) #18	ARF3 (ENSCPOG00000040787) #19	FKBP11 (ENSCPOG00000031801) #20	CCDC65 (ENSCPOG00000003221) #21	RND1 (ENSCPOG00000003220) #22	DDX23 (ENSCPOG00000003278) #23	CACNB3 (ENSCPOG00000003277) #24	ADCY6 (ENSCPOG00000030377) #25	TEX49 (ENSCPOG00000030293) #26	CCNT1 (ENSCPOG00000038705) #27	KANSL2 (ENSCPOG00000005760) #28	ENSCPOG00000024843 #29	Lalba (ENSCPOG00000027342) #30	ENSCPOG00000033889	ENSCPOG00000000012 ##36	ENSCPOG00000013910 #31	ENSCPOG00000039913	ENSCPOG00000040584 #33	ENSCPOG00000012475 #34	ENSCPOG00000036505 #35
Sciuridae	ANCESTRAL SPECIES	15	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b.b	ENSGT00390000007809.a #11	ENSGT00940000161132 #12	ENSGT00940000161665 #13	ENSGT00940000156707 #14	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B #31	ENSGT00390000014843	ENSGT00940000162202.A #34	ENSGT00940000162202.B #35	ENSGT00940000162202.C ##34	ENSGT00940000162121 #37
Marmotini	ANCESTRAL SPECIES	19	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b.b	ENSGT00390000007809.a #11	ENSGT00940000161132 #12	ENSGT00940000161665 #13	ENSGT00940000156707 #14	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B #31	ENSGT00940000159881.a.b.a ##36	ENSGT00940000162202.A #34	ENSGT00940000162202.B #35	ENSGT00940000162202.C ##34	ENSGT00940000162121 #37
Alpin marmot	MODERN SPECIES	34	ENSMMMG00000023075 #9	ENSMMMG00000023070	PRPH (ENSMMMG00000023068) #10	TUBA1C (ENSMMMG00000023064)	TUBA1A (ENSMMMG00000023062)	LMBR1L (ENSMMMG00000023056) #11	DHH (ENSMMMG00000023054) #12	RHEBL1 (ENSMMMG00000023043) #13	ENSMMMG00000023038 #14	ENSMMMG00000023022 #14	ENSMMMG00000023013 #15	DDN (ENSMMMG00000023006) #16	WNT10B (ENSMMMG00000022992) #18	FKBP11 (ENSMMMG00000022980) #20	CCDC65 (ENSMMMG00000022974) #21	RND1 (ENSMMMG00000022971) #22	DDX23 (ENSMMMG00000022958) #23	CACNB3 (ENSMMMG00000022935) #24	ADCY6 (ENSMMMG00000022920) #25	TEX49 (ENSMMMG00000022917) #26	CCNT1 (ENSMMMG00000022910) #27	KANSL2 (ENSMMMG00000022904) #28	LALBA (ENSMMMG00000022893) #30	OR5BS1P (ENSMMMG00000022891)	ENSMMMG00000022889 #31	ENSMMMG00000022886 ##36	ENSMMMG00000022885 #34	ENSMMMG00000022881 #35	ENSMMMG00000022878 ##34	ZNF641 (ENSMMMG00000022873) #37	H1-7 (ENSMMMG00000022871)
Marmotini_b	ANCESTRAL SPECIES	11	ENSGT00940000160203 #10	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b.b	ENSGT00390000007809.a #11	ENSGT00940000161132 #12	ENSGT00940000161665 #13	ENSGT00940000156707 #14	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B #31	ENSGT00940000159881.a.b.a ##36	ENSGT00940000162202.A #34	ENSGT00940000162202.B #35	ENSGT00940000162202.C ##34	ENSGT00940000162121 #37
Arctic ground squirrel	MODERN SPECIES	348	C1QL4 (ENSUPAG00010009646) #8	ENSUPAG00010009642	PRPH (ENSUPAG00010009633) #10	TUBA1C (ENSUPAG00010009626)	TUBA1B (ENSUPAG00010009604)	LMBR1L (ENSUPAG00010009579) #11	DHH (ENSUPAG00010009573) #12	RHEBL1 (ENSUPAG00010009539) #13	PRKAG1 (ENSUPAG00010009337) #15	DDN (ENSUPAG00010009325) #16	WNT1 (ENSUPAG00010009320) #17	WNT10B (ENSUPAG00010009270) #18	ARF3 (ENSUPAG00010009256) #19	FKBP11 (ENSUPAG00010009234) #20	CCDC65 (ENSUPAG00010009212) #21	RND1 (ENSUPAG00010009175) #22	DDX23 (ENSUPAG00010009132) #23	CACNB3 (ENSUPAG00010008993) #24	ADCY6 (ENSUPAG00010008904) #25	TEX49 (ENSUPAG00010008891) #26	CCNT1 (ENSUPAG00010008871) #27	KANSL2 (ENSUPAG00010008805) #28	ENSUPAG00010008799	LALBA (ENSUPAG00010008774) #30	OR5BS1P (ENSUPAG00010008767)
Squirrel	MODERN SPECIES	112	PRPH (ENSSTOG00000000282) #10	ENSSTOG00000020227	TUBA1B (ENSSTOG00000021170)	TUBA1A (ENSSTOG00000033698)	LMBR1L (ENSSTOG00000008752) #11	DHH (ENSSTOG00000000186) #12	RHEBL1 (ENSSTOG00000003967) #13	KMT2D (ENSSTOG00000003904) #14	PRKAG1 (ENSSTOG00000014648) #15	DDN (ENSSTOG00000028408) #16	WNT1 (ENSSTOG00000003902) #17	WNT10B (ENSSTOG00000004303) #18	ARF3 (ENSSTOG00000004295) #19	FKBP11 (ENSSTOG00000023089) #20	CCDC65 (ENSSTOG00000004267) #21	RND1 (ENSSTOG00000004257) #22	DDX23 (ENSSTOG00000004219) #23	CACNB3 (ENSSTOG00000004199) #24	ADCY6 (ENSSTOG00000004149) #25	TEX49 (ENSSTOG00000004134) #26	CCNT1 (ENSSTOG00000021508) #27	KANSL2 (ENSSTOG00000004118) #28	ENSSTOG00000019743 #29	LALBA (ENSSTOG00000033863) #30	ENSSTOG00000032648 #31	ENSSTOG00000033401 ##36	ENSSTOG00000005852 #33	ENSSTOG00000033341 ##34	ZNF641 (ENSSTOG00000001970) #37	OR10AD1 (ENSSTOG00000001963)	CCDC184 (ENSSTOG00000001957)
Eurasian red squirrel	MODERN SPECIES	14	TUBA1C (ENSSVLG00005014280)	TUBA1A (ENSSVLG00005014169)	TUBA1B (ENSSVLG00005014122)	LMBR1L (ENSSVLG00005014035) #11	DHH (ENSSVLG00005013965) #12	RHEBL1 (ENSSVLG00005013912) #13	ENSSVLG00005013789 #14	ENSSVLG00005013748 #14	PRKAG1 (ENSSVLG00005013661) #15	DDN (ENSSVLG00005013335) #16	WNT1 (ENSSVLG00005013249) #17	WNT10B (ENSSVLG00005013159) #18	ARF3 (ENSSVLG00005012987) #19	FKBP11 (ENSSVLG00005012794) #20	CCDC65 (ENSSVLG00005012567) #21	RND1 (ENSSVLG00005012510) #22	DDX23 (ENSSVLG00005012479) #23	CACNB3 (ENSSVLG00005012131) #24	ADCY6 (ENSSVLG00005011914) #25	TEX49 (ENSSVLG00005011832) #26	CCNT1 (ENSSVLG00005011525) #27	KANSL2 (ENSSVLG00005011410) #28	ENSSVLG00005011395	ENSSVLG00005011295	LALBA (ENSSVLG00005011187) #30	OR5BS1P (ENSSVLG00005011139)	C12orf54 (ENSSVLG00005011007)	ENSSVLG00005010951 #34	ZNF641 (ENSSVLG00005010861) #37	H1-7 (ENSSVLG00005010817)	OR10AD1 (ENSSVLG00005010756)