Mammalia	ANCESTRAL SPECIES	82	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b	ENSGT00940000154457.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00530000063607.a	ENSGT01050000244940.a.a	ENSGT00940000159962	ENSGT00930000150980.b	ENSGT00390000016511	ENSGT00950000183038.a.b.a	ENSGT00530000063734.b	ENSGT00940000157032	ENSGT00940000161446
Theria	ANCESTRAL SPECIES	2	ENSGT00940000154457.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00730000111596 #34	ENSGT00390000002978 #37	ENSGT00940000159366	ENSGT00940000155440.d	ENSGT00940000155489.b	ENSGT00940000155224	ENSGT00940000161281	ENSGT00940000155473
Eutheria	ANCESTRAL SPECIES	1	ENSGT00940000154457.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000159881.a.b.b ##32	ENSGT00940000159881.a.b.a ##32	ENSGT00940000163941.A	ENSGT00940000165904
Boreoeutheria	ANCESTRAL SPECIES	6	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00940000154457.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00560000078683	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000159881.a.b.b ##32	ENSGT00940000159881.a.b.a ##32	ENSGT00940000163941.A	ENSGT00940000162202.C ##31
Euarchontoglires	ANCESTRAL SPECIES	6	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00560000078683	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000159881.a.a.a ##32	ENSGT00390000014843	ENSGT00940000162202.A #31	ENSGT00940000162202.B ##31
Euarchontoglires_A	ANCESTRAL SPECIES	5	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00390000014843	ENSGT00940000162202.A #31	ENSGT00940000162202.B ##31	ENSGT00940000162121 #33
Glires	ANCESTRAL SPECIES	4	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00390000014843	ENSGT00940000162202.A #31	ENSGT00940000162202.B ##31	ENSGT00940000162121 #33
Rodentia	ANCESTRAL SPECIES	5	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00390000014843	ENSGT00940000162202.A #31	ENSGT00940000162202.B ##31	ENSGT00940000162202.C ##31
Rodentia_B	ANCESTRAL SPECIES	3	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000164920 #30	ENSGT00940000162202.A #31	ENSGT00940000162202.B ##31	ENSGT00940000162202.C ##31
Myomorpha	ANCESTRAL SPECIES	2	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000164920 #30	ENSGT00940000162202.A #31	ENSGT00940000162202.B ##31	ENSGT00940000162202.C ##31
Muroidea	ANCESTRAL SPECIES	31	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000164920 #30	ENSGT00940000162202.A #31	ENSGT00940000162202.B ##31	ENSGT00940000162202.C ##31
Muroidea_A	ANCESTRAL SPECIES	9	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000164920 #30	ENSGT00940000162202.A #31	ENSGT00940000162202.B ##31	ENSGT00940000162202.C ##31
Cricetidae	ANCESTRAL SPECIES	10	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000162202.A #31	ENSGT00940000162202.B ##31	ENSGT00940000162202.C ##31	ENSGT00940000162121 #33
Cricetinae	ANCESTRAL SPECIES	3	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000164920 #30	ENSGT00940000162202.A #31	ENSGT00940000162202.B ##31	ENSGT00940000162121 #33
Golden Hamster	MODERN SPECIES	626	C1ql4 (ENSMAUG00000017527) #7	Troap (ENSMAUG00000015646) #8	Prph (ENSMAUG00000015253) #9	Lmbr1l (ENSMAUG00000014206) #10	Dhh (ENSMAUG00000013999) #11	Rhebl1 (ENSMAUG00000013128) #12	ENSMAUG00000012521 #13	ENSMAUG00000012028 #14	Prkag1 (ENSMAUG00000011761) #15	Ddn (ENSMAUG00000011464) #16	Wnt1 (ENSMAUG00000012154) #17	Wnt10b (ENSMAUG00000012082) #18	Arf3 (ENSMAUG00000011928) #19	Fkbp11 (ENSMAUG00000015766) #20	Ccdc65 (ENSMAUG00000015430) #21	Rnd1 (ENSMAUG00000015221) #22	Ddx23 (ENSMAUG00000012336) #23	Cacnb3 (ENSMAUG00000012005) #24	Adcy6 (ENSMAUG00000011342) #25	Tex49 (ENSMAUG00000010854) #26	Ccnt1 (ENSMAUG00000015960) #27	Kansl2 (ENSMAUG00000015668) #28	Lalba (ENSMAUG00000013490) #29	ENSMAUG00000012783 #30	Or8s2 (ENSMAUG00000015201) #31	Or8s16 (ENSMAUG00000011283) #32	Zfp641 (ENSMAUG00000010993) #33	H1f7 (ENSMAUG00000010839) #34	ENSMAUG00000014007 #35	ENSMAUG00000019216 #36	Ccdc184 (ENSMAUG00000010780) #37
Chinese hamster chok1gshd	MODERN SPECIES	1	Prph (ENSCGRG00001006972) #9	TUBA1C (ENSCGRG00001011520)	ENSCGRG00001007551	ENSCGRG00001011667	Lmbr1l (ENSCGRG00001008575) #10	Dhh (ENSCGRG00001012548) #11	Rhebl1 (ENSCGRG00001005736) #12	Kmt2d (ENSCGRG00001004692) #13	Prkag1 (ENSCGRG00001003063) #15	Ddn (ENSCGRG00001004300) #16	Wnt1 (ENSCGRG00001003166) #17	Wnt10b (ENSCGRG00001004015) #18	Arf3 (ENSCGRG00001004437) #19	Fkbp11 (ENSCGRG00001012678) #20	Ccdc65 (ENSCGRG00001014624) #21	Rnd1 (ENSCGRG00001004988) #22	Ddx23 (ENSCGRG00001015090) #23	Cacnb3 (ENSCGRG00001007469) #24	Adcy6 (ENSCGRG00001002443) #25	Tex49 (ENSCGRG00001002641) #26	Ccnt1 (ENSCGRG00001010472) #27	Kansl2 (ENSCGRG00001007756) #28	Or11m3 (ENSCGRG00001010245)	Lalba (ENSCGRG00001004333) #29	ENSCGRG00001004394	Or8s8 (ENSCGRG00001010259)	Or8s10 (ENSCGRG00001009319)	Or8s2 (ENSCGRG00001008762) #31	Or8s5 (ENSCGRG00001007209) ##31	Zfp641 (ENSCGRG00001008450) #33	H1f7 (ENSCGRG00001006632) #34
Cricetidae_B	ANCESTRAL SPECIES	6	ENSGT00940000155969 #7	ENSGT00390000012132 #8	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000162202.A #31	ENSGT00940000162202.B ##31	ENSGT00940000162202.C ##31	ENSGT00940000162121 #33
Prairie vole	MODERN SPECIES	2	ENSMOCG00000001429	Prph (ENSMOCG00000010753) #9	Tuba1c (ENSMOCG00000011887)	Lmbr1l (ENSMOCG00000012252) #10	Dhh (ENSMOCG00000000393) #11	Rhebl1 (ENSMOCG00000004742) #12	ENSMOCG00000016455 #13	ENSMOCG00000010694 #13	Prkag1 (ENSMOCG00000014481) #15	Ddn (ENSMOCG00000016200) #16	Wnt1 (ENSMOCG00000017789) #17	Wnt10b (ENSMOCG00000021764) #18	Arf3 (ENSMOCG00000020182) #19	Fkbp11 (ENSMOCG00000021965) #20	Ccdc65 (ENSMOCG00000000518) #21	Rnd1 (ENSMOCG00000015821) #22	Ddx23 (ENSMOCG00000018987) #23	Cacnb3 (ENSMOCG00000007254) #24	Adcy6 (ENSMOCG00000013100) #25	Tex49 (ENSMOCG00000022816) #26	Ccnt1 (ENSMOCG00000012712) #27	Kansl2 (ENSMOCG00000010801) #28	Lalba (ENSMOCG00000018652) #29	ENSMOCG00000009420 #30	ENSMOCG00000017621 #34	Zfp641 (ENSMOCG00000019174) #33	ENSMOCG00000001245	ENSMOCG00000001175	Ccdc184 (ENSMOCG00000003788) #37	Asb8 (ENSMOCG00000017776)	Pfkm (ENSMOCG00000021333)
Northern American deer mouse	MODERN SPECIES	12	Troap (ENSPEMG00000009011) #8	Prph (ENSPEMG00000011347) #9	Tuba1c (ENSPEMG00000025359)	ENSPEMG00000029758	Dhh (ENSPEMG00000029701) #11	Rhebl1 (ENSPEMG00000018904) #12	ENSPEMG00000015247 #13	ENSPEMG00000015938 #13	Prkag1 (ENSPEMG00000015142) #15	Ddn (ENSPEMG00000010537) #16	Wnt1 (ENSPEMG00000024721) #17	Wnt10b (ENSPEMG00000015297) #18	Arf3 (ENSPEMG00000028616) #19	Fkbp11 (ENSPEMG00000009775) #20	Ccdc65 (ENSPEMG00000007520) #21	Rnd1 (ENSPEMG00000014224) #22	Ddx23 (ENSPEMG00000011305) #23	Cacnb3 (ENSPEMG00000014805) #24	Adcy6 (ENSPEMG00000009690) #25	Tex49 (ENSPEMG00000000495) #26	Ccnt1 (ENSPEMG00000016743) #27	Kansl2 (ENSPEMG00000008795) #28	Or11m3 (ENSPEMG00000024651)	Lalba (ENSPEMG00000007983) #29	ENSPEMG00000029296	Or8s8 (ENSPEMG00000030973)	Or8s10 (ENSPEMG00000027490)	ENSPEMG00000028993	Or8s2 (ENSPEMG00000026284) #31	Or8s5 (ENSPEMG00000026513) ##31	ENSPEMG00000012906 ##31
Murinae	ANCESTRAL SPECIES	10	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000164920 #30	ENSGT00940000162202.A #31	ENSGT00940000162202.B ##31	ENSGT00940000162202.C ##31
Mus	ANCESTRAL SPECIES	11	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000164920 #30	ENSGT00940000162202.A #31	ENSGT00940000162202.B ##31	ENSGT00940000162121 #33
Mus_A	ANCESTRAL SPECIES	13	ENSGT00390000012132 #8	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000164920 #30	ENSGT00940000162202.A #31	ENSGT00940000162202.B ##31	ENSGT00940000162121 #33
Mus_B	ANCESTRAL SPECIES	12	ENSGT00390000012132 #8	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000164920 #30	ENSGT00940000162202.A #31	ENSGT00940000162202.B ##31	ENSGT00940000159881.b #32
Mouse	MODERN SPECIES	6	Tuba1c (ENSMUSG00000043091)	Tuba1a (ENSMUSG00000072235)	Gm49450 (ENSMUSG00000116358)	Tuba1b (ENSMUSG00000023004)	Lmbr1l (ENSMUSG00000022999) #10	Dhh (ENSMUSG00000023000) #11	Rhebl1 (ENSMUSG00000023755) #12	Kmt2d (ENSMUSG00000048154) #13	Prkag1 (ENSMUSG00000067713) #15	Ddn (ENSMUSG00000059213) #16	Wnt1 (ENSMUSG00000022997) #17	Wnt10b (ENSMUSG00000022996) #18	Arf3 (ENSMUSG00000051853) #19	Fkbp11 (ENSMUSG00000003355) #20	Ccdc65 (ENSMUSG00000003354) #21	Rnd1 (ENSMUSG00000054855) #22	Ddx23 (ENSMUSG00000003360) #23	Cacnb3 (ENSMUSG00000003352) #24	Adcy6 (ENSMUSG00000022994) #25	Tex49 (ENSMUSG00000022993) #26	Ccnt1 (ENSMUSG00000011960) #27	Kansl2 (ENSMUSG00000022992) #28	Or11m3 (ENSMUSG00000054036)	Lalba (ENSMUSG00000022991) #29	OR5BS1P (ENSMUSG00000108728)	Or8s8 (ENSMUSG00000032987)	Or8s10 (ENSMUSG00000063780)	Or8s2 (ENSMUSG00000056184) #31	Or8s5 (ENSMUSG00000051793) ##31	Or8s16 (ENSMUSG00000062037) #32	Zfp641 (ENSMUSG00000022987) #33
Mus_C	ANCESTRAL SPECIES	17	ENSGT00390000012132 #8	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000164920 #30	ENSGT00940000162202.A #31	ENSGT00940000162202.B ##31	ENSGT00940000159881.b #32
Steppe mouse	MODERN SPECIES	3092	C1ql4 (ENSMSIG00000002578) #7	Troap (ENSMSIG00000002521) #8	Prph (ENSMSIG00000002429) #9	Tuba1c (ENSMSIG00000002410)	Tuba1a (ENSMSIG00000002382)	ENSMSIG00000002356	Lmbr1l (ENSMSIG00000002200) #10	Dhh (ENSMSIG00000002172) #11	ENSMSIG00000002088 #12	Prkag1 (ENSMSIG00000001568) #15	Ddn (ENSMSIG00000001553) #16	Wnt1 (ENSMSIG00000001511) #17	Wnt10b (ENSMSIG00000001386) #18	Arf3 (ENSMSIG00000001320) #19	Ccdc65 (ENSMSIG00000001269) #21	Rnd1 (ENSMSIG00000001241) #22	Ddx23 (ENSMSIG00000001169) #23	Cacnb3 (ENSMSIG00000000901) #24	Adcy6 (ENSMSIG00000000695) #25	Ccnt1 (ENSMSIG00000000619) #27	Kansl2 (ENSMSIG00000000531) #28	Or11m3 (ENSMSIG00000000513)	Lalba (ENSMSIG00000000500) #29	ENSMSIG00000000476	Or8s8 (ENSMSIG00000000461)	Or8s2 (ENSMSIG00000000448) #31	Or8s5 (ENSMSIG00000000437) ##31	ENSMSIG00000000424 #32	ENSMSIG00000000412 #32	Zfp641 (ENSMSIG00000000347) #33	H1f7 (ENSMSIG00000000314) #34
spretus	MODERN SPECIES	6	Dnajc22 (MGP_SPRETEiJ_G0021153)	C1ql4 (MGP_SPRETEiJ_G0021152) #7	Troap (MGP_SPRETEiJ_G0021151) #8	Prph (MGP_SPRETEiJ_G0021150) #9	Lmbr1l (MGP_SPRETEiJ_G0021149) #10	Dhh (MGP_SPRETEiJ_G0021148) #11	Rhebl1 (MGP_SPRETEiJ_G0021147) #12	Kmt2d (MGP_SPRETEiJ_G0021146) #13	Prkag1 (MGP_SPRETEiJ_G0021145) #15	Ddn (MGP_SPRETEiJ_G0021144) #16	Wnt1 (MGP_SPRETEiJ_G0021143) #17	Wnt10b (MGP_SPRETEiJ_G0021142) #18	Arf3 (MGP_SPRETEiJ_G0021141) #19	Fkbp11 (MGP_SPRETEiJ_G0021140) #20	Ccdc65 (MGP_SPRETEiJ_G0021139) #21	Rnd1 (MGP_SPRETEiJ_G0021138) #22	Ddx23 (MGP_SPRETEiJ_G0021137) #23	Cacnb3 (MGP_SPRETEiJ_G0021136) #24	Adcy6 (MGP_SPRETEiJ_G0021135) #25	Tex49 (MGP_SPRETEiJ_G0021134) #26	Ccnt1 (MGP_SPRETEiJ_G0021133) #27	Kansl2 (MGP_SPRETEiJ_G0021132) #28	Or11m3 (MGP_SPRETEiJ_G0021131)	Lalba (MGP_SPRETEiJ_G0021130) #29	Or8s8 (MGP_SPRETEiJ_G0021129)	Or8s10 (MGP_SPRETEiJ_G0021128)	MGP_SPRETEiJ_G0021127 #30	Or8s2 (MGP_SPRETEiJ_G0021126) #31	Or8s5 (MGP_SPRETEiJ_G0021125) ##31	MGP_SPRETEiJ_G0021124 #32	Zfp641 (MGP_SPRETEiJ_G0021123) #33
Ryukyu mouse	MODERN SPECIES	6	Troap (MGP_CAROLIEiJ_G0020256) #8	Prph (MGP_CAROLIEiJ_G0020255) #9	MGP_CAROLIEiJ_G0020254	MGP_CAROLIEiJ_G0020253	Lmbr1l (MGP_CAROLIEiJ_G0020252) #10	Dhh (MGP_CAROLIEiJ_G0020251) #11	Rhebl1 (MGP_CAROLIEiJ_G0020250) #12	Kmt2d (MGP_CAROLIEiJ_G0020249) #13	Prkag1 (MGP_CAROLIEiJ_G0020248) #15	Ddn (MGP_CAROLIEiJ_G0020247) #16	Wnt1 (MGP_CAROLIEiJ_G0020246) #17	Wnt10b (MGP_CAROLIEiJ_G0020245) #18	Arf3 (MGP_CAROLIEiJ_G0020244) #19	Fkbp11 (MGP_CAROLIEiJ_G0020243) #20	Ccdc65 (MGP_CAROLIEiJ_G0020242) #21	Rnd1 (MGP_CAROLIEiJ_G0020241) #22	Ddx23 (MGP_CAROLIEiJ_G0020240) #23	Cacnb3 (MGP_CAROLIEiJ_G0020239) #24	Adcy6 (MGP_CAROLIEiJ_G0020238) #25	Tex49 (MGP_CAROLIEiJ_G0020237) #26	Ccnt1 (MGP_CAROLIEiJ_G0020236) #27	Kansl2 (MGP_CAROLIEiJ_G0020235) #28	Or11m3 (MGP_CAROLIEiJ_G0020234)	Lalba (MGP_CAROLIEiJ_G0020233) #29	Or8s8 (MGP_CAROLIEiJ_G0020232)	Or8s10 (MGP_CAROLIEiJ_G0020231)	MGP_CAROLIEiJ_G0020230 #30	Or8s2 (MGP_CAROLIEiJ_G0020229) #31	Or8s5 (MGP_CAROLIEiJ_G0020228) ##31	Zfp641 (MGP_CAROLIEiJ_G0020227) #33	H1f7 (MGP_CAROLIEiJ_G0020226) #34
Shrew mouse	MODERN SPECIES	8	Troap (MGP_PahariEiJ_G0020259) #8	MGP_PahariEiJ_G0020258	MGP_PahariEiJ_G0020256	MGP_PahariEiJ_G0020257	Lmbr1l (MGP_PahariEiJ_G0020255) #10	Dhh (MGP_PahariEiJ_G0020254) #11	Rhebl1 (MGP_PahariEiJ_G0020253) #12	Kmt2d (MGP_PahariEiJ_G0020252) #13	Prkag1 (MGP_PahariEiJ_G0020251) #15	Ddn (MGP_PahariEiJ_G0020250) #16	Wnt1 (MGP_PahariEiJ_G0020249) #17	Wnt10b (MGP_PahariEiJ_G0020248) #18	Arf3 (MGP_PahariEiJ_G0020247) #19	Fkbp11 (MGP_PahariEiJ_G0020246) #20	Ccdc65 (MGP_PahariEiJ_G0020245) #21	Rnd1 (MGP_PahariEiJ_G0020244) #22	Ddx23 (MGP_PahariEiJ_G0020243) #23	Cacnb3 (MGP_PahariEiJ_G0020242) #24	Adcy6 (MGP_PahariEiJ_G0020241) #25	Tex49 (MGP_PahariEiJ_G0020240) #26	Ccnt1 (MGP_PahariEiJ_G0020239) #27	Kansl2 (MGP_PahariEiJ_G0020238) #28	Or11m3 (MGP_PahariEiJ_G0020237)	Lalba (MGP_PahariEiJ_G0020236) #29	Or8s8 (MGP_PahariEiJ_G0020235)	Or8s10 (MGP_PahariEiJ_G0020234)	MGP_PahariEiJ_G0020233 #30	Or8s2 (MGP_PahariEiJ_G0020232) #31	Or8s5 (MGP_PahariEiJ_G0020231) ##31	Zfp641 (MGP_PahariEiJ_G0020230) #33	H1f7 (MGP_PahariEiJ_G0020229) #34
Rat	MODERN SPECIES	17	Prph (ENSRNOG00000052880) #9	Tuba1c (ENSRNOG00000021438)	AC114446.1 (ENSRNOG00000059545)	Tuba1a (ENSRNOG00000053468)	Lmbr1l (ENSRNOG00000061607) #10	Dhh (ENSRNOG00000053675) #11	Rhebl1 (ENSRNOG00000054385) #12	Prkag1 (ENSRNOG00000070180) #15	Prkag1 (ENSRNOG00000061499) #13	Ddn (ENSRNOG00000059605) #16	Wnt1 (ENSRNOG00000061818) #17	Wnt10b (ENSRNOG00000061238) #18	Arf3 (ENSRNOG00000054775) #19	Fkbp11 (ENSRNOG00000070637) #20	Ccdc65 (ENSRNOG00000058916) #21	Rnd1 (ENSRNOG00000059857) #22	Ddx23 (ENSRNOG00000060154) #23	Cacnb3 (ENSRNOG00000054274) #24	Adcy6 (ENSRNOG00000054757) #25	Tex49 (ENSRNOG00000057264) #26	Ccnt1 (ENSRNOG00000053054) #27	Kansl2 (ENSRNOG00000060185) #28	Or11m3 (ENSRNOG00000031503)	Lalba (ENSRNOG00000010811) #29	ENSRNOG00000062462	Or8s8 (ENSRNOG00000070632)	Or8s10 (ENSRNOG00000067109)	Or8s2 (ENSRNOG00000033022) #31	Or8s5 (ENSRNOG00000064461) ##31	Or8s16 (ENSRNOG00000067164) ##31	Zfp641 (ENSRNOG00000032447) #33
Upper Galilee mountains blind mole rat	MODERN SPECIES	1666				Lmbr1l (ENSNGAG00000000187) #10	Dhh (ENSNGAG00000018490) #11	Rhebl1 (ENSNGAG00000015540) #12	ENSNGAG00000012838 #13	ENSNGAG00000012125 #13	Prkag1 (ENSNGAG00000012811) #15	Ddn (ENSNGAG00000008326) #16	Wnt1 (ENSNGAG00000007571) #17	Wnt10b (ENSNGAG00000004862) #18	Arf3 (ENSNGAG00000015800) #19	ENSNGAG00000015440 #20	Ccdc65 (ENSNGAG00000008161) #21	Rnd1 (ENSNGAG00000001259) #22	Ddx23 (ENSNGAG00000019018) #23	Cacnb3 (ENSNGAG00000017756) #24	Adcy6 (ENSNGAG00000010902) #25	Tex49 (ENSNGAG00000008742) #26	Ccnt1 (ENSNGAG00000004672) #27	Kansl2 (ENSNGAG00000001029) #28	Or11m3 (ENSNGAG00000018584)	Lalba (ENSNGAG00000019393) #29	ENSNGAG00000014255 #30
Lesser Egyptian jerboa	MODERN SPECIES	157	Tuba1c (ENSJJAG00000010823)	Tuba1a (ENSJJAG00000010205)	Tuba1b (ENSJJAG00000003271)	ENSJJAG00000000483 #10	Dhh (ENSJJAG00000000231) #11	ENSJJAG00000023273 #13	ENSJJAG00000023190	ENSJJAG00000021738 #13	Prkag1 (ENSJJAG00000021260) #15	Ddn (ENSJJAG00000020419) #16	Wnt1 (ENSJJAG00000019856) #17	Wnt10b (ENSJJAG00000019751) #18	Arf3 (ENSJJAG00000019531) #19	Fkbp11 (ENSJJAG00000019024) #20	Ccdc65 (ENSJJAG00000018310) #21	Rnd1 (ENSJJAG00000018029) #22	Ddx23 (ENSJJAG00000018994) #23	Cacnb3 (ENSJJAG00000017876) #24	Adcy6 (ENSJJAG00000016023) #25	Tex49 (ENSJJAG00000014955) #26	Ccnt1 (ENSJJAG00000014633) #27	Kansl2 (ENSJJAG00000012644) #28	ENSJJAG00000013730	Lalba (ENSJJAG00000011329) #29	ENSJJAG00000003638 #30	ENSJJAG00000001609 ##31	Zfp641 (ENSJJAG00000023912) #33	ENSJJAG00000014189	ENSJJAG00000023686	Ccdc184 (ENSJJAG00000014181) #37	ENSJJAG00000023643
Kangaroo rat	MODERN SPECIES	361	Prph (ENSDORG00000004920) #9	Tuba1c (ENSDORG00000015065)	Tuba1a (ENSDORG00000006812)	ENSDORG00000000156	ENSDORG00000008221 #10	Dhh (ENSDORG00000024818) #11	Rhebl1 (ENSDORG00000006513) #12	ENSDORG00000027776 #13	ENSDORG00000024758 #13	Prkag1 (ENSDORG00000006505) #15	Ddn (ENSDORG00000028862) #16	Wnt1 (ENSDORG00000007735) #17	Wnt10b (ENSDORG00000010403) #18	Arf3 (ENSDORG00000024681) #19	Ccdc65 (ENSDORG00000012748) #21	Rnd1 (ENSDORG00000023400) #22	Ddx23 (ENSDORG00000012659) #23	Cacnb3 (ENSDORG00000012657) #24	Adcy6 (ENSDORG00000005171) #25	Tex49 (ENSDORG00000023756) #26	Ccnt1 (ENSDORG00000002854) #27	Kansl2 (ENSDORG00000001180) #28	Lalba (ENSDORG00000009838) #29	ENSDORG00000002609 #30	ENSDORG00000025213 ##31	Zfp641 (ENSDORG00000011810) #33	ENSDORG00000027881	ENSDORG00000027511	Ccdc184 (ENSDORG00000000096) #37	Asb8 (ENSDORG00000027268)	Pfkm (ENSDORG00000000094)
Rodentia_A	ANCESTRAL SPECIES	4	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000159881.a.a.b ##32	ENSGT00390000014843	ENSGT00940000162202.A #31	ENSGT00940000162202.B ##31	ENSGT00940000162202.C ##31
Hystricomorpha	ANCESTRAL SPECIES	9	ENSGT00940000160203 #9	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000159881.a.a.b ##32	ENSGT00390000014843	ENSGT00940000162202.A #31	ENSGT00940000162202.B ##31	ENSGT00940000162121 #33
Naked mole-rat female	MODERN SPECIES	8	ENSHGLG00000007474	TUBA1B (ENSHGLG00000036029)	ENSHGLG00000046022	LMBR1L (ENSHGLG00000014791) #10	DHH (ENSHGLG00000034254) #11	RHEBL1 (ENSHGLG00000013261) #12	ENSHGLG00000050567 #13	PRKAG1 (ENSHGLG00000003937) #15	DDN (ENSHGLG00000004151) #16	WNT1 (ENSHGLG00000004305) #17	WNT10B (ENSHGLG00000005760) #18	ARF3 (ENSHGLG00000050677) #19	FKBP11 (ENSHGLG00000008146) #20	CCDC65 (ENSHGLG00000003786) #21	ENSHGLG00000048199	RND1 (ENSHGLG00000004112) #22	DDX23 (ENSHGLG00000004292) #23	CACNB3 (ENSHGLG00000007792) #24	ADCY6 (ENSHGLG00000004662) #25	TEX49 (ENSHGLG00000007195) #26	ENSHGLG00000003361 #27	ENSHGLG00000003714 #28	ENSHGLG00000033115	ENSHGLG00000050339	ENSHGLG00000004311 #29	OR5BS1P (ENSHGLG00000042484)	ENSHGLG00000020586 ##32	ENSHGLG00000020517	ENSHGLG00000047106	ENSHGLG00000036300 #31	ENSHGLG00000034108 ##31
Hystricomorpha_a	ANCESTRAL SPECIES	7	ENSGT00390000012132 #8	ENSGT00940000160203 #9	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000159881.a.a.b ##32	ENSGT00940000164920 #30	ENSGT00390000014843	ENSGT00940000162202.A #31	ENSGT00940000162202.B ##31
Hystricomorpha_b	ANCESTRAL SPECIES	78	ENSGT00940000155969 #7	ENSGT00390000012132 #8	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.b.b.a	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808.c #28	ENSGT00940000161726 #29	ENSGT00940000164920 #30	ENSGT00390000014843	ENSGT00940000162202.A #31	ENSGT00940000162202.B ##31	ENSGT00940000162121 #33	ENSGT01100000263574.a	ENSGT00390000002978 #37	ENSGT00940000159366
Long-tailed chinchilla	MODERN SPECIES	207	ENSCLAG00000004426	TROAP (ENSCLAG00000003387) #8	PRPH (ENSCLAG00000003332) #9	ENSCLAG00000004794	LMBR1L (ENSCLAG00000004048) #10	DHH (ENSCLAG00000003629) #11	RHEBL1 (ENSCLAG00000002358) #12	KMT2D (ENSCLAG00000003665) #13	PRKAG1 (ENSCLAG00000003459) #15	DDN (ENSCLAG00000003076) #16	WNT1 (ENSCLAG00000002943) #17	WNT10B (ENSCLAG00000002817) #18	ARF3 (ENSCLAG00000003101) #19	ENSCLAG00000003008 #20	CCDC65 (ENSCLAG00000002533) #21	RND1 (ENSCLAG00000003094) #22	DDX23 (ENSCLAG00000002986) #23	CACNB3 (ENSCLAG00000002138) #24	ADCY6 (ENSCLAG00000003898) #25	TEX49 (ENSCLAG00000003509) #26	CCNT1 (ENSCLAG00000003430) #27	ENSCLAG00000003022 #28	LALBA (ENSCLAG00000002878) #29	ENSCLAG00000017542	C12orf54 (ENSCLAG00000002462)	ENSCLAG00000017498 #31	ENSCLAG00000002661 ##31	ZNF641 (ENSCLAG00000002291) #33	OR10AD1 (ENSCLAG00000002006)	CCDC184 (ENSCLAG00000017612) #37	ASB8 (ENSCLAG00000003759)
Degu	MODERN SPECIES	141	ENSODEG00000004276 #8	PRPH (ENSODEG00000004229) #9	ENSODEG00000004198	LMBR1L (ENSODEG00000004152) #10	DHH (ENSODEG00000004129) #11	RHEBL1 (ENSODEG00000004107) #12	ENSODEG00000004083 #13	ENSODEG00000004064 #13	ENSODEG00000004046 #15	DDN (ENSODEG00000004034) #16	WNT1 (ENSODEG00000004027) #17	WNT10B (ENSODEG00000004020) #18	ARF3 (ENSODEG00000004009) #19	FKBP11 (ENSODEG00000003672) #20	CCDC65 (ENSODEG00000003640) #21	RND1 (ENSODEG00000003618) #22	DDX23 (ENSODEG00000003592) #23	CACNB3 (ENSODEG00000003562) #24	ADCY6 (ENSODEG00000003474) #25	ENSODEG00000003445	TEX49 (ENSODEG00000003431) #26	ENSODEG00000003425 #27	ENSODEG00000003381 #28	LALBA (ENSODEG00000003342) #29	ENSODEG00000003309 #30	ENSODEG00000003293 #31	ZNF641 (ENSODEG00000003266) #33	ENSODEG00000003244	ENSODEG00000003231	CCDC184 (ENSODEG00000019270) #37	ASB8 (ENSODEG00000004323)
Guinea pig	MODERN SPECIES	9	TROAP (ENSCPOG00000014679) #8	PRPH (ENSCPOG00000014881) #9	ENSCPOG00000031519	TUBA1B (ENSCPOG00000039484)	LMBR1L (ENSCPOG00000002999) #10	DHH (ENSCPOG00000002257) #11	RHEBL1 (ENSCPOG00000002998) #12	KMT2D (ENSCPOG00000002973) #13	PRKAG1 (ENSCPOG00000002966) #15	DDN (ENSCPOG00000002960) #16	WNT1 (ENSCPOG00000024490) #17	WNT10B (ENSCPOG00000035034) #18	ARF3 (ENSCPOG00000040787) #19	FKBP11 (ENSCPOG00000031801) #20	CCDC65 (ENSCPOG00000003221) #21	RND1 (ENSCPOG00000003220) #22	DDX23 (ENSCPOG00000003278) #23	CACNB3 (ENSCPOG00000003277) #24	ADCY6 (ENSCPOG00000030377) #25	TEX49 (ENSCPOG00000030293) #26	CCNT1 (ENSCPOG00000038705) #27	KANSL2 (ENSCPOG00000005760) #28	ENSCPOG00000024843	Lalba (ENSCPOG00000027342) #29	ENSCPOG00000033889	ENSCPOG00000000012 ##32	ENSCPOG00000013910	ENSCPOG00000039913	ENSCPOG00000040584 #30	ENSCPOG00000012475 #31	ENSCPOG00000036505 ##31
Sciuridae	ANCESTRAL SPECIES	15	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00390000014843	ENSGT00940000162202.A #31	ENSGT00940000162202.B ##31	ENSGT00940000162202.C ##31	ENSGT00940000162121 #33
Marmotini	ANCESTRAL SPECIES	19	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000159881.a.b.a ##32	ENSGT00940000162202.A #31	ENSGT00940000162202.B ##31	ENSGT00940000162202.C ##31	ENSGT00940000162121 #33
Alpin marmot	MODERN SPECIES	34	ENSMMMG00000023075 #8	ENSMMMG00000023070	PRPH (ENSMMMG00000023068) #9	TUBA1C (ENSMMMG00000023064)	TUBA1A (ENSMMMG00000023062)	LMBR1L (ENSMMMG00000023056) #10	DHH (ENSMMMG00000023054) #11	RHEBL1 (ENSMMMG00000023043) #12	ENSMMMG00000023038 #13	ENSMMMG00000023022 #13	ENSMMMG00000023013 #15	DDN (ENSMMMG00000023006) #16	WNT10B (ENSMMMG00000022992) #18	FKBP11 (ENSMMMG00000022980) #20	CCDC65 (ENSMMMG00000022974) #21	RND1 (ENSMMMG00000022971) #22	DDX23 (ENSMMMG00000022958) #23	CACNB3 (ENSMMMG00000022935) #24	ADCY6 (ENSMMMG00000022920) #25	TEX49 (ENSMMMG00000022917) #26	CCNT1 (ENSMMMG00000022910) #27	KANSL2 (ENSMMMG00000022904) #28	LALBA (ENSMMMG00000022893) #29	OR5BS1P (ENSMMMG00000022891)	ENSMMMG00000022889	ENSMMMG00000022886 ##32	ENSMMMG00000022885 #31	ENSMMMG00000022881 ##31	ENSMMMG00000022878 ##31	ZNF641 (ENSMMMG00000022873) #33	H1-7 (ENSMMMG00000022871) #34
Marmotini_b	ANCESTRAL SPECIES	11	ENSGT00940000160203 #9	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000159881.a.b.a ##32	ENSGT00940000162202.A #31	ENSGT00940000162202.B ##31	ENSGT00940000162202.C ##31	ENSGT00940000162121 #33
Arctic ground squirrel	MODERN SPECIES	348	C1QL4 (ENSUPAG00010009646) #7	ENSUPAG00010009642	PRPH (ENSUPAG00010009633) #9	TUBA1C (ENSUPAG00010009626)	TUBA1B (ENSUPAG00010009604)	LMBR1L (ENSUPAG00010009579) #10	DHH (ENSUPAG00010009573) #11	RHEBL1 (ENSUPAG00010009539) #12	PRKAG1 (ENSUPAG00010009337) #15	DDN (ENSUPAG00010009325) #16	WNT1 (ENSUPAG00010009320) #17	WNT10B (ENSUPAG00010009270) #18	ARF3 (ENSUPAG00010009256) #19	FKBP11 (ENSUPAG00010009234) #20	CCDC65 (ENSUPAG00010009212) #21	RND1 (ENSUPAG00010009175) #22	DDX23 (ENSUPAG00010009132) #23	CACNB3 (ENSUPAG00010008993) #24	ADCY6 (ENSUPAG00010008904) #25	TEX49 (ENSUPAG00010008891) #26	CCNT1 (ENSUPAG00010008871) #27	KANSL2 (ENSUPAG00010008805) #28	ENSUPAG00010008799	LALBA (ENSUPAG00010008774) #29	OR5BS1P (ENSUPAG00010008767)
Squirrel	MODERN SPECIES	112	PRPH (ENSSTOG00000000282) #9	ENSSTOG00000020227	TUBA1B (ENSSTOG00000021170)	TUBA1A (ENSSTOG00000033698)	LMBR1L (ENSSTOG00000008752) #10	DHH (ENSSTOG00000000186) #11	RHEBL1 (ENSSTOG00000003967) #12	KMT2D (ENSSTOG00000003904) #13	PRKAG1 (ENSSTOG00000014648) #15	DDN (ENSSTOG00000028408) #16	WNT1 (ENSSTOG00000003902) #17	WNT10B (ENSSTOG00000004303) #18	ARF3 (ENSSTOG00000004295) #19	FKBP11 (ENSSTOG00000023089) #20	CCDC65 (ENSSTOG00000004267) #21	RND1 (ENSSTOG00000004257) #22	DDX23 (ENSSTOG00000004219) #23	CACNB3 (ENSSTOG00000004199) #24	ADCY6 (ENSSTOG00000004149) #25	TEX49 (ENSSTOG00000004134) #26	CCNT1 (ENSSTOG00000021508) #27	KANSL2 (ENSSTOG00000004118) #28	ENSSTOG00000019743	LALBA (ENSSTOG00000033863) #29	ENSSTOG00000032648	ENSSTOG00000033401 ##32	ENSSTOG00000005852 #30	ENSSTOG00000033341 ##31	ZNF641 (ENSSTOG00000001970) #33	OR10AD1 (ENSSTOG00000001963)	CCDC184 (ENSSTOG00000001957) #37
Eurasian red squirrel	MODERN SPECIES	14	TUBA1C (ENSSVLG00005014280)	TUBA1A (ENSSVLG00005014169)	TUBA1B (ENSSVLG00005014122)	LMBR1L (ENSSVLG00005014035) #10	DHH (ENSSVLG00005013965) #11	RHEBL1 (ENSSVLG00005013912) #12	ENSSVLG00005013789 #13	ENSSVLG00005013748 #13	PRKAG1 (ENSSVLG00005013661) #15	DDN (ENSSVLG00005013335) #16	WNT1 (ENSSVLG00005013249) #17	WNT10B (ENSSVLG00005013159) #18	ARF3 (ENSSVLG00005012987) #19	FKBP11 (ENSSVLG00005012794) #20	CCDC65 (ENSSVLG00005012567) #21	RND1 (ENSSVLG00005012510) #22	DDX23 (ENSSVLG00005012479) #23	CACNB3 (ENSSVLG00005012131) #24	ADCY6 (ENSSVLG00005011914) #25	TEX49 (ENSSVLG00005011832) #26	CCNT1 (ENSSVLG00005011525) #27	KANSL2 (ENSSVLG00005011410) #28	ENSSVLG00005011395	ENSSVLG00005011295	LALBA (ENSSVLG00005011187) #29	OR5BS1P (ENSSVLG00005011139)	C12orf54 (ENSSVLG00005011007)	ENSSVLG00005010951 #31	ZNF641 (ENSSVLG00005010861) #33	H1-7 (ENSSVLG00005010817) #34	OR10AD1 (ENSSVLG00005010756)
Lagomorpha	ANCESTRAL SPECIES	81	ENSGT00390000012132 #8	ENSGT00940000160203 #9	ENSGT00940000154457.a.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.k #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00390000014843
Pika	MODERN SPECIES	9189														WNT10B (ENSOPRG00000006825) #18	CCDC65 (ENSOPRG00000006811) #21	RND1 (ENSOPRG00000006802) #22
Rabbit	MODERN SPECIES	15	TUBA1C (ENSOCUG00000028032)	ENSOCUG00000023038	ENSOCUG00000027812	LMBR1L (ENSOCUG00000011586) #10	DHH (ENSOCUG00000029219) #11	RHEBL1 (ENSOCUG00000016881) #12	KMT2D (ENSOCUG00000006202) #13	ENSOCUG00000008409 #15	DDN (ENSOCUG00000008404) #16	WNT1 (ENSOCUG00000026066) #17	WNT10B (ENSOCUG00000009580) #18	ARF3 (ENSOCUG00000039073) #19	ENSOCUG00000009574 #20	CCDC65 (ENSOCUG00000026025) #21	ENSOCUG00000035268 #21	RND1 (ENSOCUG00000025362) #22	DDX23 (ENSOCUG00000001414) #23	CACNB3 (ENSOCUG00000007401) #24	TEX49 (ENSOCUG00000007390) #26	ADCY6 (ENSOCUG00000007394) #25	CCNT1 (ENSOCUG00000007383) #27	KANSL2 (ENSOCUG00000007379) #28	LYZG (ENSOCUG00000015834) #29	ENSOCUG00000008989	ENSOCUG00000038424	ENSOCUG00000030065	ENSOCUG00000021510 #31	BMP2 (ENSOCUG00000011674)	HAO1 (ENSOCUG00000011539)	TMX4 (ENSOCUG00000007336)	ENSOCUG00000038367
Tree shrew	MODERN SPECIES	3505													ARF3 (ENSTBEG00000017353) #19	FKBP11 (ENSTBEG00000017269) #20	CCDC65 (ENSTBEG00000017191) #21	RND1 (ENSTBEG00000017126) #22	DDX23 (ENSTBEG00000016909) #23	CACNB3 (ENSTBEG00000016783) #24
Primates	ANCESTRAL SPECIES	6	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00560000078683	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000159881.a.a.a ##32	ENSGT00390000014843	ENSGT00940000162202.A #31	ENSGT00940000162202.B ##31	ENSGT00940000162121 #33	ENSGT00730000111596 #34	ENSGT01100000263574.a
Haplorrhini	ANCESTRAL SPECIES	3	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00560000078683	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000159881.a.a.a ##32	ENSGT00390000014843	ENSGT00940000162202.A #31	ENSGT00940000162121 #33	ENSGT00730000111596 #34	ENSGT01100000263574.a	ENSGT00390000002978 #37
Simiiformes	ANCESTRAL SPECIES	4	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.l.a	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00560000078683	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000159881.a.a.a ##32	ENSGT00390000014843	ENSGT00940000162202.A #31	ENSGT00940000162121 #33	ENSGT00730000111596 #34	ENSGT01100000263574.a	ENSGT00390000002978 #37
Catarrhini	ANCESTRAL SPECIES	4	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00560000078683	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b.e #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000159881.a.a.a ##32	ENSGT00390000014843	ENSGT00940000162121 #33	ENSGT00730000111596 #34	ENSGT01100000263574.a	ENSGT00910000147030	ENSGT00390000002978 #37
Hominoidea	ANCESTRAL SPECIES	5	ENSGT00390000012132 #8	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b.e #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000159881.a.a.a ##32	ENSGT00390000014843	ENSGT00940000162121 #33	ENSGT00730000111596 #34	ENSGT01100000263574.a	ENSGT00910000147030	ENSGT00390000002978 #37
Gibbon	MODERN SPECIES	23	PRPH (ENSNLEG00000017833) #9	ENSNLEG00000028012	ENSNLEG00000017835	TUBA1A (ENSNLEG00000032990)	LMBR1L (ENSNLEG00000017843) #10	DHH (ENSNLEG00000017846) #11	RHEBL1 (ENSNLEG00000017847) #12	KMT2D (ENSNLEG00000017849) #13	PRKAG1 (ENSNLEG00000017850) #15	DDN (ENSNLEG00000017854) #16	WNT1 (ENSNLEG00000017855) #17	ENSNLEG00000030793 #18	ENSNLEG00000030380 #19	CCDC65 (ENSNLEG00000017860) #21	FKBP11 (ENSNLEG00000017862) #20	RND1 (ENSNLEG00000028550) #22	DDX23 (ENSNLEG00000017864) #23	CACNB3 (ENSNLEG00000017866) #24	ADCY6 (ENSNLEG00000017868) #25	ENSNLEG00000034433 #26	CCNT1 (ENSNLEG00000017873) #27	ENSNLEG00000017874 #28	LALBA (ENSNLEG00000017877) #29	ZNF641 (ENSNLEG00000017881) #33	ENSNLEG00000017883	ENSNLEG00000017884	CCDC184 (ENSNLEG00000019275) #37	ENSNLEG00000028267	ASB8 (ENSNLEG00000017885)	PFKM (ENSNLEG00000017887)	SENP1 (ENSNLEG00000017891)
Hominidae	ANCESTRAL SPECIES	4	ENSGT00390000012132 #8	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b.e #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000159881.a.a.a ##32	ENSGT00390000014843	ENSGT00940000162121 #33	ENSGT00730000111596 #34	ENSGT01100000263574.a	ENSGT00910000147030	ENSGT00390000002978 #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	5	ENSGT00390000012132 #8	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b.e #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000159881.a.a.a ##32	ENSGT00390000014843	ENSGT00950000182907.a.b.b.b.tb.b	ENSGT00940000162121 #33	ENSGT00730000111596 #34	ENSGT01100000263574.a	ENSGT00910000147030
Homo/Pan group	ANCESTRAL SPECIES	6	ENSGT00390000012132 #8	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b.e #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000159881.a.a.a ##32	ENSGT00390000014843	ENSGT00950000182907.a.b.b.b.tb.b	ENSGT00940000162121 #33	ENSGT00730000111596 #34	ENSGT01100000263574.a	ENSGT00910000147030
Pan	ANCESTRAL SPECIES	4	ENSGT00390000012132 #8	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b.e #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000159881.a.a.a ##32	ENSGT00950000182907.a.b.b.b.tb.b	ENSGT00940000162121 #33	ENSGT00730000111596 #34	ENSGT01100000263574.a	ENSGT00910000147030	ENSGT00390000002978 #37	ENSGT00950000183070.a.b.g.b.a.c.a
Bonobo	MODERN SPECIES	3	PRPH (ENSPPAG00000034520) #9	TUBA1C (ENSPPAG00000033269)	ENSPPAG00000025479	TUBA1B (ENSPPAG00000042451)	LMBR1L (ENSPPAG00000043358) #10	DHH (ENSPPAG00000016771) #11	RHEBL1 (ENSPPAG00000034151) #12	KMT2D (ENSPPAG00000002127) #13	PRKAG1 (ENSPPAG00000041021) #15	DDN (ENSPPAG00000032934) #16	WNT1 (ENSPPAG00000026068) #17	WNT10B (ENSPPAG00000035557) #18	ARF3 (ENSPPAG00000029662) #19	CCDC65 (ENSPPAG00000043558) #21	FKBP11 (ENSPPAG00000038416) #20	RND1 (ENSPPAG00000038456) #22	DDX23 (ENSPPAG00000037807) #23	CACNB3 (ENSPPAG00000011855) #24	ADCY6 (ENSPPAG00000030921) #25	TEX49 (ENSPPAG00000036148) #26	CCNT1 (ENSPPAG00000032804) #27	ENSPPAG00000026612 #28	LALBA (ENSPPAG00000030532) #29	OR8S1 (ENSPPAG00000037092) ##32	ZNF641 (ENSPPAG00000043802) #33	H1-7 (ENSPPAG00000012971) #34	OR10AD1 (ENSPPAG00000006971)	ENSPPAG00000031405	CCDC184 (ENSPPAG00000001304) #37	ENSPPAG00000031624	ASB8 (ENSPPAG00000035275)
Chimpanzee	MODERN SPECIES	3	PRPH (ENSPTRG00000004903) #9	TUBA1C (ENSPTRG00000048544)	TUBA1A (ENSPTRG00000004901)	TUBA1B (ENSPTRG00000045808)	LMBR1L (ENSPTRG00000004899) #10	DHH (ENSPTRG00000045260) #11	RHEBL1 (ENSPTRG00000004897) #12	KMT2D (ENSPTRG00000004896) #13	PRKAG1 (ENSPTRG00000004895) #15	DDN (ENSPTRG00000004894) #16	WNT1 (ENSPTRG00000004893) #17	WNT10B (ENSPTRG00000004892) #18	ARF3 (ENSPTRG00000004891) #19	CCDC65 (ENSPTRG00000004889) #21	FKBP11 (ENSPTRG00000004890) #20	RND1 (ENSPTRG00000004888) #22	DDX23 (ENSPTRG00000004887) #23	CACNB3 (ENSPTRG00000004886) #24	ADCY6 (ENSPTRG00000004885) #25	TEX49 (ENSPTRG00000041051) #26	CCNT1 (ENSPTRG00000004883) #27	KANSL2 (ENSPTRG00000004882) #28	LALBA (ENSPTRG00000004881) #29	OR8S1 (ENSPTRG00000023679) ##32	ENSPTRG00000004879	ZNF641 (ENSPTRG00000045476) #33	H1-7 (ENSPTRG00000004877) #34	ENSPTRG00000029704	ENSPTRG00000045723	CCDC184 (ENSPTRG00000029702) #37	ENSPTRG00000048129
Human	MODERN SPECIES	3	TUBA1C (ENSG00000167553)	TUBA1A (ENSG00000167552)	TUBA1B (ENSG00000123416)	LMBR1L (ENSG00000139636) #10	DHH (ENSG00000139549) #11	RHEBL1 (ENSG00000167550) #12	KMT2D (ENSG00000167548) #13	PRKAG1 (ENSG00000181929) #15	DDN (ENSG00000181418) #16	WNT1 (ENSG00000125084) #17	WNT10B (ENSG00000169884) #18	ARF3 (ENSG00000134287) #19	FKBP11 (ENSG00000134285) #20	CCDC65 (ENSG00000139537) #21	ENSG00000272822	RND1 (ENSG00000172602) #22	DDX23 (ENSG00000174243) #23	CACNB3 (ENSG00000167535) #24	ADCY6 (ENSG00000174233) #25	TEX49 (ENSG00000257987) #26	CCNT1 (ENSG00000129315) #27	KANSL2 (ENSG00000139620) #28	LALBA (ENSG00000167531) #29	OR5BS1P (ENSG00000198678)	OR8S1 (ENSG00000284723) ##32	C12orf54 (ENSG00000177627)	ANP32D (ENSG00000139223)	ZNF641 (ENSG00000167528) #33	H1-7 (ENSG00000187166) #34	OR10AD1 (ENSG00000172640)	CCDC184 (ENSG00000177875) #37
Gorilla	MODERN SPECIES	3	DNAJC22 (ENSGGOG00000024291)	C1QL4 (ENSGGOG00000012547) #7	TROAP (ENSGGOG00000012528) #8	PRPH (ENSGGOG00000025284) #9	TUBA1C (ENSGGOG00000000769)	TUBA1A (ENSGGOG00000005381)	TUBA1B (ENSGGOG00000028554)	LMBR1L (ENSGGOG00000028106) #10	DHH (ENSGGOG00000007990) #11	RHEBL1 (ENSGGOG00000007983) #12	KMT2D (ENSGGOG00000007949) #13	PRKAG1 (ENSGGOG00000011283) #15	DDN (ENSGGOG00000011280) #16	WNT1 (ENSGGOG00000011272) #17	WNT10B (ENSGGOG00000011269) #18	RND1 (ENSGGOG00000007068) #22	DDX23 (ENSGGOG00000015252) #23	CACNB3 (ENSGGOG00000015239) #24	ADCY6 (ENSGGOG00000002316) #25	TEX49 (ENSGGOG00000041865) #26	CCNT1 (ENSGGOG00000013082) #27	ENSGGOG00000013077 #28	LALBA (ENSGGOG00000025788) #29	OR8S1 (ENSGGOG00000003022) ##32	C12orf54 (ENSGGOG00000016663)	ZNF641 (ENSGGOG00000013643) #33	H1-7 (ENSGGOG00000025202) #34	OR10AD1 (ENSGGOG00000008264)	ENSGGOG00000023950	CCDC184 (ENSGGOG00000026078) #37	ENSGGOG00000041361
Orangutan	MODERN SPECIES	3	TROAP (ENSPPYG00000004485) #8	PRPH (ENSPPYG00000004483) #9	TUBA1C (ENSPPYG00000004482)	TUBA1A (ENSPPYG00000004481)	LMBR1L (ENSPPYG00000004471) #10	DHH (ENSPPYG00000004480) #11	RHEBL1 (ENSPPYG00000004479) #12	ENSPPYG00000029928 #13	PRKAG1 (ENSPPYG00000004477) #15	DDN (ENSPPYG00000004476) #16	WNT1 (ENSPPYG00000004475) #17	WNT10B (ENSPPYG00000004474) #18	ARF3 (ENSPPYG00000004473) #19	FKBP11 (ENSPPYG00000004472) #20	CCDC65 (ENSPPYG00000004470) #21	RND1 (ENSPPYG00000004469) #22	DDX23 (ENSPPYG00000004468) #23	CACNB3 (ENSPPYG00000004467) #24	ADCY6 (ENSPPYG00000004466) #25	TEX49 (ENSPPYG00000032235) #26	CCNT1 (ENSPPYG00000036637) #27	KANSL2 (ENSPPYG00000004464) #28	LALBA (ENSPPYG00000004463) #29	OR5BS1P (ENSPPYG00000004462)	ENSPPYG00000004461 ##32	C12orf54 (ENSPPYG00000004460)	ANP32D (ENSPPYG00000004459)	ZNF641 (ENSPPYG00000036320) #33	CCDC184 (ENSPPYG00000004455) #37	ENSPPYG00000038285	ASB8 (ENSPPYG00000038698)
Cercopithecidae	ANCESTRAL SPECIES	3	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00560000078683	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b.e #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000159881.a.a.a ##32	ENSGT00390000014843	ENSGT00940000162202.A #31	ENSGT00940000162121 #33	ENSGT00730000111596 #34	ENSGT01100000263574.a	ENSGT00910000147030
Rhinopithecus	ANCESTRAL SPECIES	4	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00560000078683	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b.e #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000159881.a.a.a ##32	ENSGT00390000014843	ENSGT00390000007552.f.x.z	ENSGT00940000162121 #33	ENSGT01100000263574.a	ENSGT00910000147030	ENSGT00390000002978 #37	ENSGT00950000183070.a.b.g.b.a.d
Black snub-nosed monkey	MODERN SPECIES	1192	TROAP (ENSRBIG00000000994) #8	PRPH (ENSRBIG00000042471) #9	ENSRBIG00000026839	LMBR1L (ENSRBIG00000042873) #10	DHH (ENSRBIG00000033154) #11	RHEBL1 (ENSRBIG00000042716) #12	KMT2D (ENSRBIG00000028892) #13	PRKAG1 (ENSRBIG00000028288) #15	DDN (ENSRBIG00000028117) #16	WNT1 (ENSRBIG00000040400) #17	WNT10B (ENSRBIG00000031686) #18	ARF3 (ENSRBIG00000044317) #19	ENSRBIG00000040877	CCDC65 (ENSRBIG00000031835) #21	FKBP11 (ENSRBIG00000034219) #20	RND1 (ENSRBIG00000008703) #22	DDX23 (ENSRBIG00000040362) #23	CACNB3 (ENSRBIG00000027539) #24	ADCY6 (ENSRBIG00000020775) #25	TEX49 (ENSRBIG00000040348) #26	CCNT1 (ENSRBIG00000034059) #27	KANSL2 (ENSRBIG00000031481) #28	LALBA (ENSRBIG00000007431) #29	OR8S1 (ENSRBIG00000033095) ##32	C12orf54 (ENSRBIG00000039534)	ENSRBIG00000032258	ZNF641 (ENSRBIG00000032093) #33
Golden snub-nosed monkey	MODERN SPECIES	2523	TUBA1C (ENSRROG00000041724)	ENSRROG00000001182	TUBA1B (ENSRROG00000042978)	LMBR1L (ENSRROG00000044118) #10	DHH (ENSRROG00000034891) #11	RHEBL1 (ENSRROG00000036462) #12	KMT2D (ENSRROG00000035460) #13	PRKAG1 (ENSRROG00000037662) #15	DDN (ENSRROG00000032736) #16	WNT1 (ENSRROG00000006398) #17	WNT10B (ENSRROG00000044970) #18	ARF3 (ENSRROG00000042065) #19	ENSRROG00000044310	CCDC65 (ENSRROG00000029231) #21	FKBP11 (ENSRROG00000026680) #20	RND1 (ENSRROG00000023951) #22	DDX23 (ENSRROG00000028964) #23	CACNB3 (ENSRROG00000041133) #24	ADCY6 (ENSRROG00000043634) #25
Cercopithecinae	ANCESTRAL SPECIES	7	ENSGT00390000012132 #8	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b.e #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000159881.a.a.a ##32	ENSGT00390000014843	ENSGT00940000162202.A #31	ENSGT00940000162121 #33	ENSGT00730000111596 #34	ENSGT00390000002978 #37	ENSGT00950000183070.a.b.g.b.a.d
Vervet Monkey	MODERN SPECIES	2	PRPH (ENSCSAG00000006146) #9	TUBA1C (ENSCSAG00000006152)	TUBA1A (ENSCSAG00000006153)	ENSCSAG00000006157	LMBR1L (ENSCSAG00000006161) #10	DHH (ENSCSAG00000006163) #11	RHEBL1 (ENSCSAG00000006168) #12	KMT2D (ENSCSAG00000006178) #13	PRKAG1 (ENSCSAG00000006199) #15	DDN (ENSCSAG00000006208) #16	WNT1 (ENSCSAG00000006212) #17	WNT10B (ENSCSAG00000006220) #18	ARF3 (ENSCSAG00000006224) #19	FKBP11 (ENSCSAG00000006226) #20	CCDC65 (ENSCSAG00000006233) #21	RND1 (ENSCSAG00000006239) #22	DDX23 (ENSCSAG00000006240) #23	CACNB3 (ENSCSAG00000006242) #24	ADCY6 (ENSCSAG00000006246) #25	TEX49 (ENSCSAG00000006250) #26	CCNT1 (ENSCSAG00000006255) #27	KANSL2 (ENSCSAG00000006258) #28	LALBA (ENSCSAG00000006263) #29	OR5BS1P (ENSCSAG00000006266)	OR8S1 (ENSCSAG00000006270) ##32	C12orf54 (ENSCSAG00000006273)	ENSCSAG00000006275	ENSCSAG00000019252 #31	ZNF641 (ENSCSAG00000006278) #33	H1-7 (ENSCSAG00000019251) #34	ENSCSAG00000006285
Cercopithecinae_a	ANCESTRAL SPECIES	7	ENSGT00390000012132.c.a #8	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b.e #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000159881.a.a.a ##32	ENSGT00390000014843	ENSGT00940000162121 #33	ENSGT00730000111596 #34	ENSGT00390000002978 #37	ENSGT00950000183070.a.b.g.b.a.d	ENSGT00940000159366
Macaca	ANCESTRAL SPECIES	6	ENSGT00390000012132.c.a #8	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b.e #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000159881.a.a.a ##32	ENSGT00390000014843	ENSGT00940000162121 #33	ENSGT00730000111596 #34	ENSGT00390000002978 #37	ENSGT00950000183070.a.b.g.b.a.d	ENSGT00940000159366
Pig-tailed macaque	MODERN SPECIES	196	TROAP (ENSMNEG00000039086) #8	PRPH (ENSMNEG00000033632) #9	TUBA1C (ENSMNEG00000000827)	TUBA1B (ENSMNEG00000031206)	LMBR1L (ENSMNEG00000029874) #10	DHH (ENSMNEG00000033172) #11	RHEBL1 (ENSMNEG00000032195) #12	KMT2D (ENSMNEG00000034150) #13	PRKAG1 (ENSMNEG00000032221) #15	DDN (ENSMNEG00000036264) #16	WNT1 (ENSMNEG00000043908) #17	WNT10B (ENSMNEG00000022399) #18	ARF3 (ENSMNEG00000032173) #19	CCDC65 (ENSMNEG00000043967) #21	FKBP11 (ENSMNEG00000030125) #20	RND1 (ENSMNEG00000038480) #22	DDX23 (ENSMNEG00000040016) #23	CACNB3 (ENSMNEG00000029365) #24	ADCY6 (ENSMNEG00000043535) #25	TEX49 (ENSMNEG00000028091) #26	CCNT1 (ENSMNEG00000042465) #27	KANSL2 (ENSMNEG00000039608) #28	LALBA (ENSMNEG00000034387) #29	OR8S1 (ENSMNEG00000032997) ##32	C12orf54 (ENSMNEG00000038960)	ENSMNEG00000032933	ENSMNEG00000028722	ZNF641 (ENSMNEG00000044922) #33	ENSMNEG00000045356	CCDC184 (ENSMNEG00000000953) #37	ASB8 (ENSMNEG00000036379)
Macaca_a	ANCESTRAL SPECIES	6	ENSGT00940000155969 #7	ENSGT00390000012132.c.a #8	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b.e #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000159881.a.a.a ##32	ENSGT00390000014843	ENSGT00940000162121 #33	ENSGT00730000111596 #34	ENSGT00390000002978 #37	ENSGT00940000159366	ENSGT00940000155440.d
Rhesus	MODERN SPECIES	2	PRPH (ENSMMUG00000031976) #9	TUBA1C (ENSMMUG00000009788)	TUBA1A (ENSMMUG00000021081)	LMBR1L (ENSMMUG00000012769) #10	DHH (ENSMMUG00000012776) #11	RHEBL1 (ENSMMUG00000015721) #12	KMT2D (ENSMMUG00000015718) #13	PRKAG1 (ENSMMUG00000015713) #15	DDN (ENSMMUG00000058313) #16	WNT1 (ENSMMUG00000015709) #17	WNT10B (ENSMMUG00000015705) #18	ENSMMUG00000041595	ENSMMUG00000063745	CCDC65 (ENSMMUG00000006970) #21	ARF3 (ENSMMUG00000006971) #19	RND1 (ENSMMUG00000048864) #22	DDX23 (ENSMMUG00000008432) #23	CACNB3 (ENSMMUG00000008430) #24	ADCY6 (ENSMMUG00000006253) #25	TEX49 (ENSMMUG00000054025) #26	CCNT1 (ENSMMUG00000007629) #27	KANSL2 (ENSMMUG00000003877) #28	LALBA (ENSMMUG00000000283) #29	OR5BS1P (ENSMMUG00000059987)	OR8S1 (ENSMMUG00000000539) ##32	ENSMMUG00000048875	ZNF641 (ENSMMUG00000014484) #33	H1-7 (ENSMMUG00000051724) #34	CCDC184 (ENSMMUG00000052412) #37	ASB8 (ENSMMUG00000002048)	PFKM (ENSMMUG00000002045)
Crab-eating macaque	MODERN SPECIES	2	TROAP (ENSMFAG00000021053) #8	PRPH (ENSMFAG00000050077) #9	ENSMFAG00000042144	TUBA1B (ENSMFAG00000035643)	DHH (ENSMFAG00000051486) #11	LMBR1L (ENSMFAG00000031019) #10	RHEBL1 (ENSMFAG00000035227) #12	ENSMFAG00000038689 #13	ENSMFAG00000052907 #13	PRKAG1 (ENSMFAG00000040023) #15	DDN (ENSMFAG00000025897) #16	WNT1 (ENSMFAG00000034644) #17	WNT10B (ENSMFAG00000043880) #18	ARF3 (ENSMFAG00000036847) #19	CCDC65 (ENSMFAG00000000659) #21	RND1 (ENSMFAG00000052114) #22	DDX23 (ENSMFAG00000038666) #23	CACNB3 (ENSMFAG00000041712) #24	ADCY6 (ENSMFAG00000039058) #25	TEX49 (ENSMFAG00000041881) #26	CCNT1 (ENSMFAG00000042457) #27	KANSL2 (ENSMFAG00000039042) #28	ENSMFAG00000050804	LALBA (ENSMFAG00000003340) #29	OR5BS1P (ENSMFAG00000060517)	OR8S1 (ENSMFAG00000043587) ##32	ENSMFAG00000031362	ENSMFAG00000049420	ENSMFAG00000042792 #33	H1-7 (ENSMFAG00000053048) #34	CCDC184 (ENSMFAG00000058649) #37
Cercopithecinae_b	ANCESTRAL SPECIES	2	ENSGT00940000155969 #7	ENSGT00390000012132.d #8	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b.e #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000159881.a.a.a ##32	ENSGT00390000014843	ENSGT00390000003125.i.b	ENSGT00940000162121 #33	ENSGT00730000111596 #34	ENSGT00390000002978 #37	ENSGT00940000159366
Cercopithecinae_d	ANCESTRAL SPECIES	3	ENSGT00940000155969 #7	ENSGT00390000012132.d #8	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b.e #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000159881.a.a.a ##32	ENSGT00390000014843	ENSGT00390000003125.i.b	ENSGT00940000162121 #33	ENSGT00390000004856.w.a.a.b.a.a.b	ENSGT00940000157911.b.a	ENSGT00910000147030	ENSGT00390000002978 #37
Sooty mangabey	MODERN SPECIES	571	TROAP (ENSCATG00000043456) #8	PRPH (ENSCATG00000039831) #9	TUBA1C (ENSCATG00000031924)	TUBA1B (ENSCATG00000038328)	LMBR1L (ENSCATG00000012344) #10	DHH (ENSCATG00000041798) #11	RHEBL1 (ENSCATG00000037990) #12	KMT2D (ENSCATG00000038964) #13	PRKAG1 (ENSCATG00000035196) #15	DDN (ENSCATG00000041447) #16	WNT10B (ENSCATG00000042594) #18	WNT1 (ENSCATG00000029984) #17	ARF3 (ENSCATG00000033929) #19	CCDC65 (ENSCATG00000035262) #21	FKBP11 (ENSCATG00000030882) #20	RND1 (ENSCATG00000026420) #22	DDX23 (ENSCATG00000039797) #23	CACNB3 (ENSCATG00000036744) #24	ADCY6 (ENSCATG00000031664) #25	TEX49 (ENSCATG00000026325) #26	CCNT1 (ENSCATG00000012742) #27	KANSL2 (ENSCATG00000039151) #28	LALBA (ENSCATG00000035302) #29	OR8S1 (ENSCATG00000004425) ##32	C12orf54 (ENSCATG00000034097)	ENSCATG00000041332	ZNF641 (ENSCATG00000043835) #33	ENSCATG00000021099	ENSCATG00000038030	ENSCATG00000032527	ASB8 (ENSCATG00000030950)
Drill	MODERN SPECIES	959	TUBA1C (ENSMLEG00000043554)	ENSMLEG00000031016	ENSMLEG00000026197	LMBR1L (ENSMLEG00000043801) #10	DHH (ENSMLEG00000029947) #11	RHEBL1 (ENSMLEG00000043169) #12	KMT2D (ENSMLEG00000027718) #13	PRKAG1 (ENSMLEG00000040639) #15	DDN (ENSMLEG00000042019) #16	WNT1 (ENSMLEG00000006250) #17	WNT10B (ENSMLEG00000023418) #18	ARF3 (ENSMLEG00000028270) #19	ENSMLEG00000018862	CCDC65 (ENSMLEG00000039143) #21	FKBP11 (ENSMLEG00000043157) #20	RND1 (ENSMLEG00000030008) #22	DDX23 (ENSMLEG00000042846) #23	CACNB3 (ENSMLEG00000021784) #24	ADCY6 (ENSMLEG00000043020) #25	TEX49 (ENSMLEG00000031575) #26	CCNT1 (ENSMLEG00000043751) #27	KANSL2 (ENSMLEG00000030435) #28	ENSMLEG00000033939 #29	OR8S1 (ENSMLEG00000043967) ##32	C12orf54 (ENSMLEG00000013602)	ENSMLEG00000030489	ENSMLEG00000036523	ZNF641 (ENSMLEG00000044259) #33	ENSMLEG00000007600	ENSMLEG00000035066	ENSMLEG00000039549
Olive baboon	MODERN SPECIES	19	ENSPANG00000012632 #8	PRPH (ENSPANG00000014074) #9	ENSPANG00000038136	ENSPANG00000047303	LMBR1L (ENSPANG00000022414) #10	DHH (ENSPANG00000022683) #11	RHEBL1 (ENSPANG00000006545) #12	KMT2D (ENSPANG00000000833) #13	PRKAG1 (ENSPANG00000000832) #15	DDN (ENSPANG00000010116) #16	WNT1 (ENSPANG00000014119) #17	WNT10B (ENSPANG00000043026) #18	ARF3 (ENSPANG00000025346) #19	FKBP11 (ENSPANG00000007285) #20	CCDC65 (ENSPANG00000019461) #21	RND1 (ENSPANG00000039740) #22	DDX23 (ENSPANG00000019459) #23	CACNB3 (ENSPANG00000019458) #24	ADCY6 (ENSPANG00000021677) #25	TEX49 (ENSPANG00000016674) #26	CCNT1 (ENSPANG00000012633) #27	KANSL2 (ENSPANG00000019844) #28	LALBA (ENSPANG00000050965) #29	OR5BS1P (ENSPANG00000041563)	OR8S1 (ENSPANG00000006685) ##32	C12orf54 (ENSPANG00000008134)	ENSPANG00000041823	ENSPANG00000041580	ZNF641 (ENSPANG00000014075) #33	H1-7 (ENSPANG00000045002) #34	CCDC184 (ENSPANG00000014422) #37
Platyrrhini	ANCESTRAL SPECIES	6	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.l.a	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00560000078683	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00390000014843	ENSGT00940000162202.A #31	ENSGT00730000111596 #34	ENSGT00940000162121 #33	ENSGT00530000063539.b	ENSGT00940000158580	ENSGT00730000110905.b
Cebidae	ANCESTRAL SPECIES	2	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00560000078683	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00390000014843	ENSGT00940000162202.A #31	ENSGT00730000111596 #34	ENSGT00940000162121 #33	ENSGT00940000158580	ENSGT00730000110905.b	ENSGT00940000153832.f
Cebidae_a	ANCESTRAL SPECIES	5	ENSGT00940000154457.a.a	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00560000078683	ENSGT00940000159521 #20	ENSGT00950000182960.a.a.a.a.b.rb.n.a.a	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00390000014843	ENSGT00940000162202.A #31	ENSGT00730000111596 #34	ENSGT00940000162121 #33	ENSGT00940000158580	ENSGT00730000110905.b	ENSGT00940000153832.f	ENSGT00940000155811
Bolivian squirrel monkey	MODERN SPECIES	153	ENSSBOG00000028238	LMBR1L (ENSSBOG00000023418) #10	DHH (ENSSBOG00000036092) #11	RHEBL1 (ENSSBOG00000035130) #12	KMT2D (ENSSBOG00000035169) #13	PRKAG1 (ENSSBOG00000021677) #15	DDN (ENSSBOG00000021863) #16	WNT1 (ENSSBOG00000023811) #17	WNT10B (ENSSBOG00000016250) #18	ARF3 (ENSSBOG00000021606) #19	ENSSBOG00000018490	FKBP11 (ENSSBOG00000023963) #20	ENSSBOG00000034756	ENSSBOG00000029649	CCDC65 (ENSSBOG00000023064) #21	RND1 (ENSSBOG00000001346) #22	DDX23 (ENSSBOG00000025799) #23	CACNB3 (ENSSBOG00000002898) #24
Capuchin	MODERN SPECIES	181	ENSCCAG00000032130	ENSCCAG00000036239	LMBR1L (ENSCCAG00000034639) #10	DHH (ENSCCAG00000008770) #11	RHEBL1 (ENSCCAG00000021754) #12	KMT2D (ENSCCAG00000034677) #13	PRKAG1 (ENSCCAG00000017317) #15	DDN (ENSCCAG00000030806) #16	WNT1 (ENSCCAG00000031046) #17	WNT10B (ENSCCAG00000037600) #18	ENSCCAG00000033541	ARF3 (ENSCCAG00000037739) #19	FKBP11 (ENSCCAG00000032118) #20	ENSCCAG00000023694	CCDC65 (ENSCCAG00000036201) #21	RND1 (ENSCCAG00000034569) #22	DDX23 (ENSCCAG00000029177) #23	CACNB3 (ENSCCAG00000036470) #24	ADCY6 (ENSCCAG00000024076) #25	TEX49 (ENSCCAG00000032188) #26	CCNT1 (ENSCCAG00000023845) #27	KANSL2 (ENSCCAG00000020376) #28	LALBA (ENSCCAG00000025269) #29	C12orf54 (ENSCCAG00000037784)	ENSCCAG00000034809	ENSCCAG00000021143 #31	H1-7 (ENSCCAG00000014081) #34	ZNF641 (ENSCCAG00000036303) #33	ENSCCAG00000037642	ENSCCAG00000026653	CPM (ENSCCAG00000037814)
Marmoset	MODERN SPECIES	21	PRPH (ENSCJAG00000020904) #9	TUBA1C (ENSCJAG00000075171)	TUBA1A (ENSCJAG00000071730)	TUBA1B (ENSCJAG00000086136)	LMBR1L (ENSCJAG00000020863) #10	DHH (ENSCJAG00000020862) #11	RHEBL1 (ENSCJAG00000020856) #12	ENSCJAG00000058349 #13	ENSCJAG00000020827 #15	DDN (ENSCJAG00000048410) #16	WNT1 (ENSCJAG00000020813) #17	WNT10B (ENSCJAG00000020802) #18	ARF3 (ENSCJAG00000020800) #19	CCDC65 (ENSCJAG00000020792) #21	FKBP11 (ENSCJAG00000046812) #20	RND1 (ENSCJAG00000051836) #22	DDX23 (ENSCJAG00000020775) #23	CACNB3 (ENSCJAG00000020762) #24	ADCY6 (ENSCJAG00000020756) #25	TEX49 (ENSCJAG00000041983) #26	CCNT1 (ENSCJAG00000020739) #27	KANSL2 (ENSCJAG00000020735) #28	LALBA (ENSCJAG00000020732) #29	OR5BS1P (ENSCJAG00000060436)	C12orf54 (ENSCJAG00000020725)	ZNF641 (ENSCJAG00000082757) #33	ENSCJAG00000070721	ENSCJAG00000074436	CPM (ENSCJAG00000001828)	CPSF6 (ENSCJAG00000001798)	LYZ (ENSCJAG00000001779)
Mas night monkey	MODERN SPECIES	1029	ENSANAG00000028464	LMBR1L (ENSANAG00000038013) #10	DHH (ENSANAG00000023041) #11	RHEBL1 (ENSANAG00000025035) #12	KMT2D (ENSANAG00000024519) #13	PRKAG1 (ENSANAG00000029035) #15	DDN (ENSANAG00000027078) #16	WNT1 (ENSANAG00000026167) #17	WNT10B (ENSANAG00000031838) #18	ENSANAG00000020636	ARF3 (ENSANAG00000025111) #19	ENSANAG00000030850	FKBP11 (ENSANAG00000032791) #20	ENSANAG00000036811	CCDC65 (ENSANAG00000025259) #21	RND1 (ENSANAG00000032196) #22	DDX23 (ENSANAG00000018663) #23	CACNB3 (ENSANAG00000023621) #24	ADCY6 (ENSANAG00000030000) #25	TEX49 (ENSANAG00000024703) #26	CCNT1 (ENSANAG00000019549) #27	KANSL2 (ENSANAG00000029846) #28	LALBA (ENSANAG00000027355) #29	C12orf54 (ENSANAG00000035791)	ZNF641 (ENSANAG00000036405) #33	ENSANAG00000038209	CPM (ENSANAG00000038366)	CPSF6 (ENSANAG00000019240)	LYZ (ENSANAG00000019339)	YEATS4 (ENSANAG00000032795)	ENSANAG00000033517
Tarsier	MODERN SPECIES	6705				TUBA1A (ENSTSYG00000031483)	TUBA1B (ENSTSYG00000013266)	LMBR1L (ENSTSYG00000009959) #10	DHH (ENSTSYG00000030517) #11	RHEBL1 (ENSTSYG00000036357) #12	KMT2D (ENSTSYG00000001131) #13	PRKAG1 (ENSTSYG00000013458) #15	WNT1 (ENSTSYG00000037339) #17	WNT10B (ENSTSYG00000035601) #18	ARF3 (ENSTSYG00000011564) #19	FKBP11 (ENSTSYG00000007691) #20	CCDC65 (ENSTSYG00000007635) #21	RND1 (ENSTSYG00000027407) #22	DDX23 (ENSTSYG00000005429) #23	CACNB3 (ENSTSYG00000005384) #24	ADCY6 (ENSTSYG00000014642) #25	TEX49 (ENSTSYG00000034408) #26	CCNT1 (ENSTSYG00000025426) #27	KANSL2 (ENSTSYG00000009751) #28	LALBA (ENSTSYG00000007307) #29
Strepsirrhini	ANCESTRAL SPECIES	3	ENSGT00940000160203 #9	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000159881.a.a.a ##32	ENSGT00390000014843	ENSGT00940000162202.B ##31	ENSGT00940000162121 #33	ENSGT00730000111596 #34	ENSGT01100000263574.a	ENSGT00390000002978 #37
Lemuriformes	ANCESTRAL SPECIES	1	ENSGT00940000160203 #9	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000159881.a.a.a ##32	ENSGT00390000014843	ENSGT00940000162202.B ##31	ENSGT00940000162121 #33	ENSGT00730000111596 #34	ENSGT01100000263574.a	ENSGT00390000002978 #37
Mouse lemur	MODERN SPECIES	29	PRPH (ENSMICG00000016388) #9	ENSMICG00000036184	TUBA1A (ENSMICG00000031961)	TUBA1B (ENSMICG00000046786)	LMBR1L (ENSMICG00000017550) #10	DHH (ENSMICG00000017549) #11	RHEBL1 (ENSMICG00000017548) #12	KMT2D (ENSMICG00000017547) #13	PRKAG1 (ENSMICG00000035239) #15	DDN (ENSMICG00000032556) #16	WNT1 (ENSMICG00000045219) #17	WNT10B (ENSMICG00000011017) #18	ARF3 (ENSMICG00000043617) #19	CCDC65 (ENSMICG00000029612) #21	FKBP11 (ENSMICG00000017545) #20	RND1 (ENSMICG00000034995) #22	DDX23 (ENSMICG00000017541) #23	CACNB3 (ENSMICG00000017540) #24	ADCY6 (ENSMICG00000011825) #25	TEX49 (ENSMICG00000046126) #26	CCNT1 (ENSMICG00000045745) #27	KANSL2 (ENSMICG00000005369) #28	LALBA (ENSMICG00000027875) #29	C12orf54 (ENSMICG00000044033)	ZNF641 (ENSMICG00000007360) #33	ENSMICG00000043548	ASB8 (ENSMICG00000036562)	ENSMICG00000009077	SENP1 (ENSMICG00000009067)	COL2A1 (ENSMICG00000009035)	TMEM106C (ENSMICG00000001808)
Lemuriformes_a	ANCESTRAL SPECIES	8	ENSGT00390000012132 #8	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000159881.a.a.a ##32	ENSGT00390000014843	ENSGT00940000162202.B ##31	ENSGT00940000162121 #33	ENSGT00730000111596 #34	ENSGT01100000263574.a	ENSGT00390000002978 #37
Greater bamboo lemur	MODERN SPECIES	157					LMBR1L (ENSPSMG00000005135) #10	DHH (ENSPSMG00000005234) #11	RHEBL1 (ENSPSMG00000005241) #12	KMT2D (ENSPSMG00000005275) #13	PRKAG1 (ENSPSMG00000005361) #15	DDN (ENSPSMG00000005533) #16	WNT1 (ENSPSMG00000005535) #17	WNT10B (ENSPSMG00000005540) #18	ARF3 (ENSPSMG00000005561) #19	FKBP11 (ENSPSMG00000005580) #20	CCDC65 (ENSPSMG00000005598) #21	RND1 (ENSPSMG00000005611) #22	DDX23 (ENSPSMG00000005631) #23	CACNB3 (ENSPSMG00000005832) #24	ADCY6 (ENSPSMG00000006198) #25	TEX49 (ENSPSMG00000006230) #26	CCNT1 (ENSPSMG00000006248) #27	KANSL2 (ENSPSMG00000006262) #28	LALBA (ENSPSMG00000006288) #29	OR5BS1P (ENSPSMG00000006293)	OR8S1 (ENSPSMG00000006307) ##32	C12orf54 (ENSPSMG00000006313)	ENSPSMG00000006325 ##31	ZNF641 (ENSPSMG00000006343) #33	ENSPSMG00000006354 #34	OR10AD1 (ENSPSMG00000006355)	CCDC184 (ENSPSMG00000006359) #37
Coquerels sifaka	MODERN SPECIES	91	TROAP (ENSPCOG00000020936) #8	PRPH (ENSPCOG00000024415) #9	TUBA1C (ENSPCOG00000023706)	TUBA1A (ENSPCOG00000014540)	LMBR1L (ENSPCOG00000021876) #10	DHH (ENSPCOG00000000341) #11	RHEBL1 (ENSPCOG00000025412) #12	KMT2D (ENSPCOG00000023172) #13	PRKAG1 (ENSPCOG00000014137) #15	DDN (ENSPCOG00000027752) #16	WNT1 (ENSPCOG00000015303) #17	WNT10B (ENSPCOG00000005304) #18	ARF3 (ENSPCOG00000001914) #19	FKBP11 (ENSPCOG00000017728) #20	ENSPCOG00000019265 #21	RND1 (ENSPCOG00000021549) #22	DDX23 (ENSPCOG00000025915) #23	CACNB3 (ENSPCOG00000027005) #24	ADCY6 (ENSPCOG00000007340) #25	TEX49 (ENSPCOG00000019022) #26	CCNT1 (ENSPCOG00000024849) #27	KANSL2 (ENSPCOG00000024808) #28
Bushbaby	MODERN SPECIES	185	TROAP (ENSOGAG00000009440) #8	PRPH (ENSOGAG00000009430) #9	ENSOGAG00000032046	TUBA1B (ENSOGAG00000009435)	LMBR1L (ENSOGAG00000005451) #10	DHH (ENSOGAG00000034671) #11	ENSOGAG00000013477 #12	KMT2D (ENSOGAG00000013443) #13	ENSOGAG00000013439 #15	DDN (ENSOGAG00000013435) #16	WNT1 (ENSOGAG00000028669) #17	WNT10B (ENSOGAG00000016922) #18	ENSOGAG00000012858 #19	FKBP11 (ENSOGAG00000006494) #20	CCDC65 (ENSOGAG00000006488) #21	RND1 (ENSOGAG00000034246) #22	DDX23 (ENSOGAG00000016813) #23	CACNB3 (ENSOGAG00000028602) #24	ADCY6 (ENSOGAG00000016801) #25	CCNT1 (ENSOGAG00000016794) #27	KANSL2 (ENSOGAG00000033595) #28	LALBA (ENSOGAG00000028012) #29	OR8S1 (ENSOGAG00000005676) ##32	C12orf54 (ENSOGAG00000005674)	ENSOGAG00000034537 ##31	ZNF641 (ENSOGAG00000005519) #33	H1-7 (ENSOGAG00000008945) #34	OR10AD1 (ENSOGAG00000005517)	CCDC184 (ENSOGAG00000030121) #37	ASB8 (ENSOGAG00000005509)	PFKM (ENSOGAG00000005501)
Laurasiatheria	ANCESTRAL SPECIES	6	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00560000078683	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000159881.a.b.b ##32	ENSGT00940000159881.a.b.a ##32	ENSGT00940000163941.A	ENSGT00940000162202.C ##31	ENSGT00940000159881.a.a.a ##32
Eulipotyphla	ANCESTRAL SPECIES	158														ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24
Common shrew	MODERN SPECIES	4846															ENSSARG00000004603 #21	RND1 (ENSSARG00000004593) #22	DDX23 (ENSSARG00000004534) #23	CACNB3 (ENSSARG00000004502) #24
Hedgehog	MODERN SPECIES	10653																RND1 (ENSEEUG00000015869) #22
Laurasiatheria_a	ANCESTRAL SPECIES	6	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00560000078683	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000159881.a.a.b ##32	ENSGT00940000159881.a.b.b ##32	ENSGT00940000159881.a.b.a ##32	ENSGT00940000163941.A	ENSGT00940000162202.C ##31
Artiodactyla	ANCESTRAL SPECIES	6	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00560000078683	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.C.a	ENSGT00940000162388.C.b	ENSGT00940000162388.A	ENSGT00940000159881.a.a.b ##32	ENSGT00940000159881.a.b.b ##32	ENSGT00940000159881.a.b.a ##32
Suina	ANCESTRAL SPECIES	21	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00560000078683	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000167128	ENSGT00940000157255	ENSGT00390000015968	ENSGT00940000157835	ENSGT00950000183132.A	ENSGT01050000244879.b.a.b.a	ENSGT00390000014700.a	ENSGT00390000013899.a.a	ENSGT00530000063817.b	ENSGT00940000155455
Chacoan peccary	MODERN SPECIES	899	DNAJC22 (ENSCWAG00000018638)	C1QL4 (ENSCWAG00000018661) #7	TROAP (ENSCWAG00000018696) #8	PRPH (ENSCWAG00000018787) #9	TUBA1C (ENSCWAG00000018842)	LMBR1L (ENSCWAG00000019023) #10	DHH (ENSCWAG00000019060) #11	RHEBL1 (ENSCWAG00000019080) #12	PRKAG1 (ENSCWAG00000019683) #15	DDN (ENSCWAG00000019760) #16	WNT1 (ENSCWAG00000019782) #17	WNT10B (ENSCWAG00000019813) #18	ARF3 (ENSCWAG00000019853) #19	FKBP11 (ENSCWAG00000019881) #20	CCDC65 (ENSCWAG00000019906) #21	RND1 (ENSCWAG00000019925) #22	DDX23 (ENSCWAG00000019941) #23	CACNB3 (ENSCWAG00000020007) #24	ADCY6 (ENSCWAG00000020127) #25	TEX49 (ENSCWAG00000020170) #26	CCNT1 (ENSCWAG00000020191) #27	ENSCWAG00000020216	NUAK1 (ENSCWAG00000020234)	CKAP4 (ENSCWAG00000020245)	TCP11L2 (ENSCWAG00000020258)	POLR3B (ENSCWAG00000020275)	RFX4 (ENSCWAG00000020335)	RIC8B (ENSCWAG00000020465)	TMEM263 (ENSCWAG00000020539)	MTERF2 (ENSCWAG00000020546)	CRY1 (ENSCWAG00000020554)
Pig	MODERN SPECIES	13	ENSSSCG00000000194	TUBA1B (ENSSSCG00000000190)	LMBR1L (ENSSSCG00000000189) #10	DHH (ENSSSCG00000000188) #11	RHEBL1 (ENSSSCG00000000186) #12	ENSSSCG00000042640 #13	ENSSSCG00000035856 #13	PRKAG1 (ENSSSCG00000000185) #15	DDN (ENSSSCG00000000184) #16	WNT1 (ENSSSCG00000000183) #17	WNT10B (ENSSSCG00000000182) #18	ARF3 (ENSSSCG00000051954) #19	ENSSSCG00000032202	FKBP11 (ENSSSCG00000059895) #20	CCDC65 (ENSSSCG00000000179) #21	RND1 (ENSSSCG00000038562) #22	DDX23 (ENSSSCG00000000176) #23	CACNB3 (ENSSSCG00000032967) #24	ADCY6 (ENSSSCG00000000175) #25	TEX49 (ENSSSCG00000000174) #26	CCNT1 (ENSSSCG00000038181) #27	C12orf75 (ENSSSCG00000031661)	NUAK1 (ENSSSCG00000032861)	CKAP4 (ENSSSCG00000000171)	TCP11L2 (ENSSSCG00000024881)	POLR3B (ENSSSCG00000057209)	RFX4 (ENSSSCG00000052141)	RIC8B (ENSSSCG00000000167)	TMEM263 (ENSSSCG00000038968)	MTERF2 (ENSSSCG00000039109)	CRY1 (ENSSSCG00000000164)
Artiodactyla_a	ANCESTRAL SPECIES	5	ENSGT00940000160203 #9	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.C.a	ENSGT00940000162388.C.b	ENSGT00940000162388.A	ENSGT00940000159881.a.a.b ##32	ENSGT00940000159881.a.b.b ##32	ENSGT00940000159881.a.a.a ##32
Camelidae	ANCESTRAL SPECIES	27	ENSGT00950000182825.A.a.b.a.b.a.a.b	ENSGT00940000154457.a.a.d	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.C.b	ENSGT00940000159881.a.a.b ##32	ENSGT00940000159881.a.a.a ##32	ENSGT00980000199472	ENSGT00390000014843	ENSGT00940000162202.B ##31
Arabian camel	MODERN SPECIES	3	ENSCDRG00005006108	PRPH (ENSCDRG00005006126) #9	ENSCDRG00005006150	ENSCDRG00005006163	LMBR1L (ENSCDRG00005006301) #10	DHH (ENSCDRG00005006364) #11	RHEBL1 (ENSCDRG00005006397) #12	KMT2D (ENSCDRG00005006455) #13	PRKAG1 (ENSCDRG00005006815) #15	DDN (ENSCDRG00005007430) #16	WNT1 (ENSCDRG00005007459) #17	WNT10B (ENSCDRG00005007497) #18	ARF3 (ENSCDRG00005007669) #19	FKBP11 (ENSCDRG00005007776) #20	CCDC65 (ENSCDRG00005007938) #21	RND1 (ENSCDRG00005007992) #22	DDX23 (ENSCDRG00005008033) #23	CACNB3 (ENSCDRG00005008229) #24	ADCY6 (ENSCDRG00005008996) #25	TEX49 (ENSCDRG00005009197) #26	CCNT1 (ENSCDRG00005009254) #27	KANSL2 (ENSCDRG00005009454) #28	LALBA (ENSCDRG00005009690) #29	OR5BS1P (ENSCDRG00005009797)	ENSCDRG00005009851	ENSCDRG00005009869	ENSCDRG00005009891 ##32	OR8S1 (ENSCDRG00005009912) ##32	ENSCDRG00005009926	C12orf54 (ENSCDRG00005009973)	ENSCDRG00005010054 ##31
Artiodactyla_b	ANCESTRAL SPECIES	5	ENSGT00940000160203 #9	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.C.a	ENSGT00940000162388.C.b	ENSGT00940000162388.A	ENSGT00940000159881.a.a.b ##32	ENSGT00940000159881.a.b.b ##32	ENSGT00940000159881.a.a.a ##32
Cetacea	ANCESTRAL SPECIES	8	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.bc.b	ENSGT00940000154457.a.a.c.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.cc	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00390000014843	ENSGT00940000162202.A #31	ENSGT00940000162202.B ##31	ENSGT00940000165904.b	ENSGT00940000162121 #33	ENSGT00730000111596 #34	ENSGT00390000002978 #37	ENSGT00940000159366
Odontoceti	ANCESTRAL SPECIES	7	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.bc.b	ENSGT00940000154457.a.a.c.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.cc	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000162202.A #31	ENSGT00940000162202.B ##31	ENSGT00940000162121 #33	ENSGT00730000111596 #34	ENSGT00390000002978 #37	ENSGT00940000159366	ENSGT00940000155440.d	ENSGT00940000155489.b.f
Odontoceti_a	ANCESTRAL SPECIES	6	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.bc.b	ENSGT00940000154457.a.a.c.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.cc	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000162202.A #31	ENSGT00940000162202.B ##31	ENSGT00940000162121 #33	ENSGT00730000111596 #34	ENSGT00390000002978 #37	ENSGT00940000159366	ENSGT00940000155440.d	ENSGT00940000155489.b.f
Odontoceti_b	ANCESTRAL SPECIES	7	ENSGT00940000160203 #9	ENSGT00940000154457.a.a.c.a	ENSGT00900000143450	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.cc	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000162202.A #31	ENSGT00940000162202.B ##31	ENSGT00940000162121 #33	ENSGT00730000111596 #34	ENSGT00390000002978 #37	ENSGT00940000159366	ENSGT00940000155440.d	ENSGT00940000155489.b.f
Monodontidae	ANCESTRAL SPECIES	6	ENSGT01010000229521	ENSGT00940000154457.a.a.c.a	ENSGT00900000143450	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.cc	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000162202.A #31	ENSGT00940000162202.B ##31	ENSGT00940000162121 #33	ENSGT00730000111596 #34	ENSGT00390000002978 #37	ENSGT00940000159366	ENSGT00940000155440.d	ENSGT00940000155489.b.f
Narwhal	MODERN SPECIES	313	ENSMMNG00015021728	ENSMMNG00015021713	ENSMMNG00015021709	TUBA1B (ENSMMNG00015021671)	LMBR1L (ENSMMNG00015021626) #10	DHH (ENSMMNG00015021606) #11	RHEBL1 (ENSMMNG00015021596) #12	KMT2D (ENSMMNG00015021547) #13	PRKAG1 (ENSMMNG00015021509) #15	DDN (ENSMMNG00015021490) #16	WNT1 (ENSMMNG00015021481) #17	WNT10B (ENSMMNG00015021457) #18	ARF3 (ENSMMNG00015021435) #19	FKBP11 (ENSMMNG00015021421) #20	CCDC65 (ENSMMNG00015021403) #21	RND1 (ENSMMNG00015021382) #22	DDX23 (ENSMMNG00015021351) #23	CACNB3 (ENSMMNG00015021282) #24	ADCY6 (ENSMMNG00015021235) #25	TEX49 (ENSMMNG00015021216) #26	CCNT1 (ENSMMNG00015021207) #27	KANSL2 (ENSMMNG00015021172) #28	LALBA (ENSMMNG00015021155) #29	ENSMMNG00015021133 #31	ENSMMNG00015021120 ##31	ZNF641 (ENSMMNG00015021069) #33	ENSMMNG00015021040 #34	CCDC184 (ENSMMNG00015021019) #37	ASB8 (ENSMMNG00015020972)	PFKM (ENSMMNG00015020844)	SENP1 (ENSMMNG00015020735)
Beluga whale	MODERN SPECIES	39	ENSDLEG00000005507	ENSDLEG00000005525	ENSDLEG00000005535	ENSDLEG00000005539	LMBR1L (ENSDLEG00000005547) #10	DHH (ENSDLEG00000005560) #11	RHEBL1 (ENSDLEG00000005603) #12	ENSDLEG00000005622 #13	PRKAG1 (ENSDLEG00000005643) #15	DDN (ENSDLEG00000005658) #16	WNT1 (ENSDLEG00000005671) #17	WNT10B (ENSDLEG00000005685) #18	ARF3 (ENSDLEG00000005695) #19	FKBP11 (ENSDLEG00000005706) #20	CCDC65 (ENSDLEG00000005725) #21	RND1 (ENSDLEG00000005740) #22	DDX23 (ENSDLEG00000005750) #23	CACNB3 (ENSDLEG00000005763) #24	ADCY6 (ENSDLEG00000005780) #25	TEX49 (ENSDLEG00000005785) #26	CCNT1 (ENSDLEG00000005789) #27	KANSL2 (ENSDLEG00000005802) #28	LALBA (ENSDLEG00000005853) #29	ENSDLEG00000005857 #31	ENSDLEG00000005879 ##31	ZNF641 (ENSDLEG00000005908) #33	ENSDLEG00000005917 #34	CCDC184 (ENSDLEG00000005920) #37	ASB8 (ENSDLEG00000005926)	PFKM (ENSDLEG00000005929)	SENP1 (ENSDLEG00000005948)
Vaquita	MODERN SPECIES	1	PRPH (ENSPSNG00000010814) #9	ENSPSNG00000010933	TUBA1A (ENSPSNG00000010994)	KLHL8 (ENSPSNG00000011123)	TUBA1B (ENSPSNG00000011161)	LMBR1L (ENSPSNG00000011226) #10	DHH (ENSPSNG00000011320) #11	RHEBL1 (ENSPSNG00000011379) #12	KMT2D (ENSPSNG00000011440) #13	ENSPSNG00000011515 #15	DDN (ENSPSNG00000011626) #16	WNT10B (ENSPSNG00000011881) #18	ARF3 (ENSPSNG00000011993) #19	FKBP11 (ENSPSNG00000012091) #20	CCDC65 (ENSPSNG00000012176) #21	RND1 (ENSPSNG00000012213) #22	DDX23 (ENSPSNG00000012273) #23	CACNB3 (ENSPSNG00000012498) #24	ADCY6 (ENSPSNG00000012820) #25	TEX49 (ENSPSNG00000012970) #26	CCNT1 (ENSPSNG00000013040) #27	KANSL2 (ENSPSNG00000013130) #28	LALBA (ENSPSNG00000013222) #29	ENSPSNG00000013321 #31	ENSPSNG00000013345 ##31	ZNF641 (ENSPSNG00000013419) #33	ENSPSNG00000013590 #34	CCDC184 (ENSPSNG00000013611) #37	ASB8 (ENSPSNG00000013660)	PFKM (ENSPSNG00000013971)	SENP1 (ENSPSNG00000014150)
Dolphin	MODERN SPECIES	2013					TUBA1B (ENSTTRG00000004794)	LMBR1L (ENSTTRG00000004787) #10	DHH (ENSTTRG00000004783) #11	RHEBL1 (ENSTTRG00000004778) #12	KMT2D (ENSTTRG00000004737) #13	PRKAG1 (ENSTTRG00000004730) #15	WNT1 (ENSTTRG00000004715) #17	WNT10B (ENSTTRG00000004707) #18	ARF3 (ENSTTRG00000004698) #19	FKBP11 (ENSTTRG00000004690) #20	CCDC65 (ENSTTRG00000004671) #21	RND1 (ENSTTRG00000004652) #22	DDX23 (ENSTTRG00000004604) #23
Sperm whale	MODERN SPECIES	17	KCNH3 (ENSPCTG00005008212)	SPATS2 (ENSPCTG00005008268)	ENSPCTG00005008318	C1QL4 (ENSPCTG00005008336) #7	TROAP (ENSPCTG00005008366) #8	TUBA1B (ENSPCTG00005008408)	ENSPCTG00005008557	ENSPCTG00005008583	LMBR1L (ENSPCTG00005008612) #10	DHH (ENSPCTG00005008692) #11	RHEBL1 (ENSPCTG00005008730) #12	ENSPCTG00005008759 #13	ENSPCTG00005008813 #13	PRKAG1 (ENSPCTG00005008847) #15	DDN (ENSPCTG00005009026) #16	RND1 (ENSPCTG00005009054) #22	DDX23 (ENSPCTG00005009112) #23	CACNB3 (ENSPCTG00005009465) #24	ADCY6 (ENSPCTG00005009811) #25	TEX49 (ENSPCTG00005009964) #26	CCNT1 (ENSPCTG00005010029) #27	KANSL2 (ENSPCTG00005010081) #28	LALBA (ENSPCTG00005010137) #29	OR10AD1 (ENSPCTG00005010253)	ZNF641 (ENSPCTG00005010300) #33	H1-7 (ENSPCTG00005010454) #34	CCDC184 (ENSPCTG00005010471) #37	ASB8 (ENSPCTG00005010504)	PFKM (ENSPCTG00005010671)	SENP1 (ENSPCTG00005011241)	COL2A1 (ENSPCTG00005011414)
Blue whale	MODERN SPECIES	1	TUBA1C (ENSBMSG00010017602)	ENSBMSG00010017570	ENSBMSG00010017482	LMBR1L (ENSBMSG00010017366) #10	DHH (ENSBMSG00010017307) #11	RHEBL1 (ENSBMSG00010017253) #12	ENSBMSG00010017213 #13	ENSBMSG00010017183 #13	ENSBMSG00010017118 #15	DDN (ENSBMSG00010017081) #16	WNT1 (ENSBMSG00010017037) #17	WNT10B (ENSBMSG00010016972) #18	ARF3 (ENSBMSG00010016925) #19	FKBP11 (ENSBMSG00010016883) #20	CCDC65 (ENSBMSG00010016833) #21	RND1 (ENSBMSG00010016812) #22	DDX23 (ENSBMSG00010016731) #23	CACNB3 (ENSBMSG00010015985) #24	ADCY6 (ENSBMSG00010015810) #25	TEX49 (ENSBMSG00010015728) #26	CCNT1 (ENSBMSG00010015691) #27	KANSL2 (ENSBMSG00010015639) #28	LALBA (ENSBMSG00010015595) #29	C12orf54 (ENSBMSG00010015534)	ENSBMSG00010015505 #31	ENSBMSG00010015482 ##31	ENSBMSG00010015450 ##31	ENSBMSG00010015426	ZNF641 (ENSBMSG00010015344) #33	H1-7 (ENSBMSG00010015314) #34	CCDC184 (ENSBMSG00010015284) #37
Pecora	ANCESTRAL SPECIES	3	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00960000190898	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000163803.i	ENSGT00940000162388.B	ENSGT00940000162388.C.a	ENSGT00940000162388.C.b	ENSGT00940000162388.A	ENSGT00940000159881.a.a.b ##32	ENSGT00940000159881.a.b.b ##32	ENSGT00940000159881.a.a.a ##32
Yarkand deer	MODERN SPECIES	22	TROAP (ENSCHYG00000003840) #8	PRPH (ENSCHYG00000003901) #9	TUBA1B (ENSCHYG00000003929)	ENSCHYG00000003953	LMBR1L (ENSCHYG00000003957) #10	DHH (ENSCHYG00000005055) #11	RHEBL1 (ENSCHYG00000005073) #12	KMT2D (ENSCHYG00000005198) #13	PRKAG1 (ENSCHYG00000005803) #15	DDN (ENSCHYG00000006028) #16	WNT1 (ENSCHYG00000006049) #17	WNT10B (ENSCHYG00000006086) #18	ENSCHYG00000006160 #19	ENSCHYG00000006248	CCDC65 (ENSCHYG00000006275) #21	RND1 (ENSCHYG00000006305) #22	ENSCHYG00000006333 #23	CACNB3 (ENSCHYG00000006420) #24	ADCY6 (ENSCHYG00000006802) #25	TEX49 (ENSCHYG00000007024) #26	CCNT1 (ENSCHYG00000007058) #27	KANSL2 (ENSCHYG00000007154) #28	LALBA (ENSCHYG00000007267) #29	OR5BS1P (ENSCHYG00000007297)	ENSCHYG00000007310	ENSCHYG00000007316	ENSCHYG00000007334	ENSCHYG00000007345	ENSCHYG00000007357 ##32	ENSCHYG00000007368 ##32	OR8S1 (ENSCHYG00000007382) ##32
Percora_a	ANCESTRAL SPECIES	3	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00960000190898	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000163803.i	ENSGT00940000162388.B	ENSGT00940000162388.C.a	ENSGT00940000162388.C.b	ENSGT00940000162388.A	ENSGT00940000159881.a.a.b ##32	ENSGT00940000159881.a.b.b ##32	ENSGT00940000159881.a.a.a ##32
Siberian musk deer	MODERN SPECIES	320	ENSMMSG00000012233	ENSMMSG00000012225	ENSMMSG00000012207	ENSMMSG00000012192	LMBR1L (ENSMMSG00000012091) #10	DHH (ENSMMSG00000012067) #11	RHEBL1 (ENSMMSG00000012021) #12	KMT2D (ENSMMSG00000011813) #13	PRKAG1 (ENSMMSG00000011683) #15	DDN (ENSMMSG00000011655) #16	WNT1 (ENSMMSG00000011621) #17	WNT10B (ENSMMSG00000011539) #18	ARF3 (ENSMMSG00000011483) #19	FKBP11 (ENSMMSG00000011435) #20	CCDC65 (ENSMMSG00000011417) #21	RND1 (ENSMMSG00000011388) #22	DDX23 (ENSMMSG00000011285) #23	CACNB3 (ENSMMSG00000011142) #24	ADCY6 (ENSMMSG00000010871) #25	TEX49 (ENSMMSG00000010808) #26	CCNT1 (ENSMMSG00000010725) #27	KANSL2 (ENSMMSG00000010604) #28	LALBA (ENSMMSG00000010555) #29	ENSMMSG00000010541	ENSMMSG00000010527	ENSMMSG00000010508	ENSMMSG00000010488	ENSMMSG00000010450	ENSMMSG00000010441	C12orf54 (ENSMMSG00000010410)	ENSMMSG00000010379
Bovidae	ANCESTRAL SPECIES	3	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00960000190898	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000163803.j	ENSGT00940000163803.i	ENSGT00940000162388.B	ENSGT00940000162388.C.a	ENSGT00940000162388.C.b	ENSGT00940000162388.A	ENSGT00940000159881.a.a.b ##32	ENSGT00940000159881.a.b.b ##32
Caprinae	ANCESTRAL SPECIES		ENSGT00940000160203 #9	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000163803.j	ENSGT00940000163803.i	ENSGT00940000162388.B	ENSGT00940000162388.C.a	ENSGT00940000159881.a.a.b ##32	ENSGT00940000159881.a.b.b ##32	ENSGT00940000159881.a.a.a ##32	ENSGT00390000014843
Rambouillet Sheep	MODERN SPECIES	19	ENSOARG00020000929	TUBA1C (ENSOARG00020000944)	TUBA1A (ENSOARG00020000988)	ENSOARG00020001038	LMBR1L (ENSOARG00020001056) #10	DHH (ENSOARG00020001078) #11	RHEBL1 (ENSOARG00020001088) #12	KMT2D (ENSOARG00020001142) #13	PRKAG1 (ENSOARG00020001353) #15	DDN (ENSOARG00020001388) #16	WNT1 (ENSOARG00020001399) #17	WNT10B (ENSOARG00020001413) #18	ARF3 (ENSOARG00020001435) #19	FKBP11 (ENSOARG00020001464) #20	CCDC65 (ENSOARG00020001481) #21	RND1 (ENSOARG00020001495) #22	DDX23 (ENSOARG00020001513) #23	CACNB3 (ENSOARG00020001592) #24	ADCY6 (ENSOARG00020001829) #25	TEX49 (ENSOARG00020001874) #26	CCNT1 (ENSOARG00020001901) #27	KANSL2 (ENSOARG00020001947) #28	LALBA (ENSOARG00020001995) #29	ENSOARG00020002005	ENSOARG00020002016	ENSOARG00020002030	ENSOARG00020002038	ENSOARG00020002069 ##32	ENSOARG00020002087 ##32	OR8S1 (ENSOARG00020002101) ##32	ENSOARG00020002107 ##32
Goat	MODERN SPECIES	24	ENSCHIG00000019237	ENSCHIG00000025067	TUBA1A (ENSCHIG00000022988)	TUBA1B (ENSCHIG00000018025)	LMBR1L (ENSCHIG00000015579) #10	DHH (ENSCHIG00000009754) #11	RHEBL1 (ENSCHIG00000016686) #12	KMT2D (ENSCHIG00000015068) #13	PRKAG1 (ENSCHIG00000020571) #15	DDN (ENSCHIG00000009245) #16	WNT1 (ENSCHIG00000018993) #17	WNT10B (ENSCHIG00000010919) #18	ARF3 (ENSCHIG00000019252) #19	FKBP11 (ENSCHIG00000015331) #20	CCDC65 (ENSCHIG00000009627) #21	RND1 (ENSCHIG00000026053) #22	DDX23 (ENSCHIG00000018783) #23	CACNB3 (ENSCHIG00000012486) #24	ADCY6 (ENSCHIG00000011753) #25	TEX49 (ENSCHIG00000013799) #26	CCNT1 (ENSCHIG00000024236) #27	KANSL2 (ENSCHIG00000026147) #28	LALBA (ENSCHIG00000021449) #29	ENSCHIG00000011758	ENSCHIG00000022566 ##32	C12orf54 (ENSCHIG00000026745)	ENSCHIG00000011654 #31	ENSCHIG00000009579 ##31	ZNF641 (ENSCHIG00000023090) #33	ENSCHIG00000009244	ENSCHIG00000009773
Bovinae	ANCESTRAL SPECIES	17	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.dc.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00960000190898	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.ec	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000163803.i.b.a.a	ENSGT00940000162388.B	ENSGT00940000162388.C.a	ENSGT00940000162388.C.b	ENSGT00940000162388.A	ENSGT00940000159881.a.a.b ##32	ENSGT00940000159881.a.b.b ##32	ENSGT00940000159881.a.a.a ##32
Bos	ANCESTRAL SPECIES	2	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.dc.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00960000190898	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.ec	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000163803.i.b.a.a	ENSGT00970000197187	ENSGT00940000162388.B	ENSGT00940000162388.C.a	ENSGT00940000162388.C.b	ENSGT00940000162388.A.a	ENSGT00940000159881.a.a.b ##32	ENSGT00940000159881.a.b.b ##32
Bos_a	ANCESTRAL SPECIES	3	ENSGT00950000182825.A.a.b.a.b.a.b.a.a.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.ec	ENSGT00960000190898	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000163803.i.b.a.a	ENSGT00970000197187	ENSGT00940000162388.B	ENSGT00940000162388.C.a	ENSGT00940000162388.C.b	ENSGT00940000162388.A.a	ENSGT00940000159881.a.a.b ##32	ENSGT00940000159881.a.b.b ##32
Wild yak	MODERN SPECIES	811	ENSBMUG00000023293	ENSBMUG00000023265	ENSBMUG00000023231	TUBA1A (ENSBMUG00000023218)	LMBR1L (ENSBMUG00000023203) #10	DHH (ENSBMUG00000023184) #11	RHEBL1 (ENSBMUG00000023169) #12	KMT2D (ENSBMUG00000023143) #13	PRKAG1 (ENSBMUG00000023104) #15	DDN (ENSBMUG00000023077) #16	WNT1 (ENSBMUG00000023065) #17	WNT10B (ENSBMUG00000023052) #18	ARF3 (ENSBMUG00000023035) #19	FKBP11 (ENSBMUG00000023022) #20	CCDC65 (ENSBMUG00000022996) #21	RND1 (ENSBMUG00000022988) #22	DDX23 (ENSBMUG00000022978) #23	CACNB3 (ENSBMUG00000022951) #24	ADCY6 (ENSBMUG00000022919) #25	TEX49 (ENSBMUG00000022878) #26	CCNT1 (ENSBMUG00000022863) #27	KANSL2 (ENSBMUG00000022822) #28	LALBA (ENSBMUG00000022803) #29	ENSBMUG00000022798	ENSBMUG00000022792	ENSBMUG00000022786	ENSBMUG00000022781
Domestic yak	MODERN SPECIES	24	TUBA1C (ENSBGRG00000001528)	ENSBGRG00000001514	ENSBGRG00000001508	TUBA1B (ENSBGRG00000001452)	LMBR1L (ENSBGRG00000001347) #10	DHH (ENSBGRG00000001304) #11	RHEBL1 (ENSBGRG00000001273) #12	ENSBGRG00000001247 #13	ENSBGRG00000001218 #13	PRKAG1 (ENSBGRG00000001150) #15	DDN (ENSBGRG00000001128) #16	WNT1 (ENSBGRG00000001101) #17	WNT10B (ENSBGRG00000001078) #18	ENSBGRG00000000979 #19	CCDC65 (ENSBGRG00000000948) #21	RND1 (ENSBGRG00000000933) #22	DDX23 (ENSBGRG00000000870) #23	CACNB3 (ENSBGRG00000000782) #24	ADCY6 (ENSBGRG00000000673) #25	TEX49 (ENSBGRG00000000640) #26	ENSBGRG00000000624 #27	KANSL2 (ENSBGRG00000000597) #28	OR5BS1P (ENSBGRG00000000585)	ENSBGRG00000000479 #29	ENSBGRG00000000462	ENSBGRG00000000452	ENSBGRG00000000448	ENSBGRG00000000442	ENSBGRG00000000434 ##32	ENSBGRG00000000426 ##32	ENSBGRG00000000359
Bos_b	ANCESTRAL SPECIES	4	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.dc.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00960000190898	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.ec	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00940000163803.i.b.a.a	ENSGT00970000197187	ENSGT00940000162388.B	ENSGT00940000162388.C.a	ENSGT00940000162388.C.b	ENSGT00940000162388.A.b	ENSGT00940000162388.A.a	ENSGT00940000159881.a.b.b ##32
Cow	MODERN SPECIES	24	TUBA1C (ENSBTAG00000039992)	TUBA1A (ENSBTAG00000001489)	ENSBTAG00000052201	TUBA1B (ENSBTAG00000012244)	LMBR1L (ENSBTAG00000044048) #10	DHH (ENSBTAG00000000124) #11	RHEBL1 (ENSBTAG00000006557) #12	KMT2D (ENSBTAG00000014429) #13	PRKAG1 (ENSBTAG00000014426) #15	DDN (ENSBTAG00000014424) #16	WNT1 (ENSBTAG00000015364) #17	WNT10B (ENSBTAG00000015347) #18	ARF3 (ENSBTAG00000051755) #19	FKBP11 (ENSBTAG00000015828) #20	CCDC65 (ENSBTAG00000015825) #21	RND1 (ENSBTAG00000018773) #22	DDX23 (ENSBTAG00000021810) #23	CACNB3 (ENSBTAG00000021808) #24	ADCY6 (ENSBTAG00000005464) #25	TEX49 (ENSBTAG00000054993) #26	CCNT1 (ENSBTAG00000005861) #27	KANSL2 (ENSBTAG00000002693) #28	LALBA (ENSBTAG00000005859) #29	ENSBTAG00000051046	OR8S8 (ENSBTAG00000038290)	OR8S27 (ENSBTAG00000007706)	OR8S25 (ENSBTAG00000050247)	OR8S10 (ENSBTAG00000051668)	OR8S15 (ENSBTAG00000054691) ##32	OR8S1 (ENSBTAG00000038670) ##32	OR8S24 (ENSBTAG00000052728)
Hybrid Bos Indicus	MODERN SPECIES	24	ENSBIXG00005019629	ENSBIXG00005003208	ENSBIXG00005019748	LMBR1L (ENSBIXG00005019839) #10	DHH (ENSBIXG00005019876) #11	RHEBL1 (ENSBIXG00005005865) #12	KMT2D (ENSBIXG00005003303) #13	PRKAG1 (ENSBIXG00005003339) #15	DDN (ENSBIXG00005020214) #16	WNT1 (ENSBIXG00005020242) #17	WNT10B (ENSBIXG00005003396) #18	ENSBIXG00005020272	ENSBIXG00005003404	CCDC65 (ENSBIXG00005020299) #21	ENSBIXG00005020352 #19	RND1 (ENSBIXG00005003441) #22	DDX23 (ENSBIXG00005020544) #23	CACNB3 (ENSBIXG00005007344) #24	ADCY6 (ENSBIXG00005003512) #25	TEX49 (ENSBIXG00005006658) #26	ENSBIXG00005020791	CCNT1 (ENSBIXG00005020870) #27	KANSL2 (ENSBIXG00005006660) #28	OR5BS1P (ENSBIXG00005021006)	ENSBIXG00005003554 #29	ENSBIXG00005021075	ENSBIXG00005006598	ENSBIXG00005021096	ENSBIXG00005021105	ENSBIXG00005021112	ENSBIXG00005021120
American bison	MODERN SPECIES	3297	TUBA1A (ENSBBBG00000007243)	ENSBBBG00000023336	TUBA1B (ENSBBBG00000023348)	LMBR1L (ENSBBBG00000006114) #10	DHH (ENSBBBG00000023379) #11	RHEBL1 (ENSBBBG00000023390) #12	KMT2D (ENSBBBG00000023729) #13	PRKAG1 (ENSBBBG00000023811) #15	DDN (ENSBBBG00000023827) #16	WNT1 (ENSBBBG00000023837) #17	WNT10B (ENSBBBG00000023874) #18	ARF3 (ENSBBBG00000000297) #19	ENSBBBG00000023893 #20	ENSBBBG00000023906 #20	CCDC65 (ENSBBBG00000023926) #21	RND1 (ENSBBBG00000023931) #22	DDX23 (ENSBBBG00000006233) #23	CACNB3 (ENSBBBG00000024120) #24	ADCY6 (ENSBBBG00000006325) #25	TEX49 (ENSBBBG00000024301) #26	CCNT1 (ENSBBBG00000024356) #27	KANSL2 (ENSBBBG00000008714) #28	LALBA (ENSBBBG00000024432) #29	OR5BS1P (ENSBBBG00000009008)	ENSBBBG00000024447	ENSBBBG00000024452	EDDM13 (ENSBBBG00000024494)	ENSBBBG00000006390	ZNF583 (ENSBBBG00000024520)	ZNF582 (ENSBBBG00000006396)	ENSBBBG00000024546
Laurasiatheria_b	ANCESTRAL SPECIES	6	ENSGT00940000160203 #9	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000153832.f.y	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000159881.a.a.b ##32	ENSGT00940000159881.a.b.b ##32	ENSGT00940000159881.a.b.a ##32
Carnivora	ANCESTRAL SPECIES	3	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000153832.f.y	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000159881.a.b.b ##32	ENSGT00940000159881.a.b.a ##32	ENSGT00940000159881.a.a.b ##32
Caniformia	ANCESTRAL SPECIES	19	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.b.h	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000153832.f.y	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000159881.a.a.b.d ##32	ENSGT00940000159881.a.b.b ##32	ENSGT00940000159881.a.b.a ##32
Caniformia_b	ANCESTRAL SPECIES	17	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00940000154457.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000153832.f.y	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000159881.a.a.b.c.a ##32	ENSGT00940000159881.a.b.b ##32	ENSGT00940000159881.a.b.a ##32
Ursidae	ANCESTRAL SPECIES	36	ENSGT00950000185831	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.a	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000153832.f.y	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B.a
Ursus	ANCESTRAL SPECIES	39	ENSGT00950000185831	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.a	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000153832.f.y	ENSGT00940000161726 #29	ENSGT00940000162388.B.a	ENSGT00940000159881.a.a.b.c.a ##32	ENSGT00940000162388.A	ENSGT00940000162388.B.b
Polar bear	MODERN SPECIES	262	ENSUMAG00000006609	TUBA1B (ENSUMAG00000006597)	LMBR1L (ENSUMAG00000006589) #10	DHH (ENSUMAG00000006584) #11	RHEBL1 (ENSUMAG00000006580) #12	ENSUMAG00000006572 #13	ENSUMAG00000006565 #13	ENSUMAG00000006564	PRKAG1 (ENSUMAG00000006562) #15	WNT1 (ENSUMAG00000006560) #17	WNT10B (ENSUMAG00000006558) #18	ENSUMAG00000006555 #19	FKBP11 (ENSUMAG00000006552) #20	ENSUMAG00000006550	CCDC65 (ENSUMAG00000006548) #21	RND1 (ENSUMAG00000006545) #22	DDX23 (ENSUMAG00000006538) #23	CACNB3 (ENSUMAG00000006493) #24	ADCY6 (ENSUMAG00000006483) #25	TEX49 (ENSUMAG00000006472) #26	CCNT1 (ENSUMAG00000006450) #27	KANSL2 (ENSUMAG00000006435) #28	ENSUMAG00000006431	LALBA (ENSUMAG00000006409) #29	ENSUMAG00000006405	ENSUMAG00000006397	ENSUMAG00000006394	OR8S1 (ENSUMAG00000006392) ##32	ENSUMAG00000006389	ENSUMAG00000006386	ENSUMAG00000006382 #31
American black bear	MODERN SPECIES	751				LMBR1L (ENSUAMG00000027066) #10	DHH (ENSUAMG00000027067) #11	RHEBL1 (ENSUAMG00000027068) #12	KMT2D (ENSUAMG00000027069) #13	PRKAG1 (ENSUAMG00000027070) #15	DDN (ENSUAMG00000027071) #16	WNT1 (ENSUAMG00000027072) #17	WNT10B (ENSUAMG00000027073) #18	ARF3 (ENSUAMG00000027074) #19	FKBP11 (ENSUAMG00000027075) #20	ENSUAMG00000027076 #21	ENSUAMG00000027080 #21	RND1 (ENSUAMG00000027081) #22	DDX23 (ENSUAMG00000027082) #23	CACNB3 (ENSUAMG00000027084) #24
Giant Panda	MODERN SPECIES	7	SPATS2 (ENSAMEG00000000881)	DNAJC22 (ENSAMEG00000000876)	C1QL4 (ENSAMEG00000030468) #7	TROAP (ENSAMEG00000000850) #8	PRPH (ENSAMEG00000000783) #9	TUBA1C (ENSAMEG00000025910)	LMBR1L (ENSAMEG00000006887) #10	DHH (ENSAMEG00000006895) #11	RHEBL1 (ENSAMEG00000006903) #12	KMT2D (ENSAMEG00000006918) #13	DDN (ENSAMEG00000028769) #16	WNT1 (ENSAMEG00000007017) #17	WNT10B (ENSAMEG00000007028) #18	ENSAMEG00000026161 #19	CCDC65 (ENSAMEG00000007083) #21	RND1 (ENSAMEG00000028088) #22	DDX23 (ENSAMEG00000007123) #23	CACNB3 (ENSAMEG00000007171) #24	ADCY6 (ENSAMEG00000007210) #25	TEX49 (ENSAMEG00000007279) #26	CCNT1 (ENSAMEG00000007281) #27	KANSL2 (ENSAMEG00000007312) #28	ENSAMEG00000007338	LALBA (ENSAMEG00000007352) #29	OR5BS1P (ENSAMEG00000007376)	ENSAMEG00000030163	ENSAMEG00000029295 ##32	ENSAMEG00000030502 ##32	OR8S1 (ENSAMEG00000025995) ##32	ENSAMEG00000030056	C12orf54 (ENSAMEG00000006120)
Mustelinae	ANCESTRAL SPECIES	33	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00940000154457.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000153832.f.y	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000159881.a.b.b ##32	ENSGT00940000159881.a.a.b.c.b ##32	ENSGT00940000162202.C ##31
American mink	MODERN SPECIES	196	PRPH (ENSNVIG00000006650) #9	TUBA1C (ENSNVIG00000006678)	TUBA1A (ENSNVIG00000006688)	ENSNVIG00000006708	LMBRL (ENSNVIG00000006723) #10	DHH (ENSNVIG00000006799) #11	RHEBL1 (ENSNVIG00000006821) #12	KMT2D (ENSNVIG00000006871) #13	PRKAG1 (ENSNVIG00000007086) #15	DDN (ENSNVIG00000007147) #16	WNT1 (ENSNVIG00000007159) #17	ENSNVIG00000007174 #18	ARF3 (ENSNVIG00000007196) #19	FKBP11 (ENSNVIG00000007239) #20	CCDC65 (ENSNVIG00000007265) #21	RND1 (ENSNVIG00000007275) #22	DDX23 (ENSNVIG00000007288) #23	CACNB3 (ENSNVIG00000007329) #24	ADCY6 (ENSNVIG00000007481) #25	TEX49 (ENSNVIG00000007724) #26	CCNT1 (ENSNVIG00000007751) #27	KANSL2 (ENSNVIG00000007784) #28	ENSNVIG00000007827	LALBA (ENSNVIG00000007843) #29	OR5BS1P (ENSNVIG00000007849)	ENSNVIG00000007858	ENSNVIG00000007864	ENSNVIG00000007869 ##32	ENSNVIG00000007870 ##31	OR8S1 (ENSNVIG00000007877) ##32	ENSNVIG00000007881
Canidae	ANCESTRAL SPECIES	8	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.b.h	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000153832.f.y	ENSGT00940000153241.A.h	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B.c	ENSGT00940000162388.B.d.b	ENSGT00940000162388.B.d.a	ENSGT00940000162388.A	ENSGT00940000159881.a.a.b.d ##32
Red fox	MODERN SPECIES	32	TROAP (ENSVVUG00000020927) #8	PRPH (ENSVVUG00000020924) #9	ENSVVUG00000020906	ENSVVUG00000020903	ENSVVUG00000020900	LMBR1L (ENSVVUG00000020897) #10	DHH (ENSVVUG00000020895) #11	RHEBL1 (ENSVVUG00000020894) #12	PRKAG1 (ENSVVUG00000019735) #15	DDN (ENSVVUG00000019700) #16	WNT1 (ENSVVUG00000019697) #17	WNT10B (ENSVVUG00000019690) #18	ARF3 (ENSVVUG00000019673) #19	ENSVVUG00000019671 #20	CCDC65 (ENSVVUG00000019666) #21	RND1 (ENSVVUG00000019659) #22	DDX23 (ENSVVUG00000019648) #23	CACNB3 (ENSVVUG00000019645) #24	ADCY6 (ENSVVUG00000019630) #25	TEX49 (ENSVVUG00000019619) #26	CCNT1 (ENSVVUG00000019590) #27	ENSVVUG00000019583	ENSVVUG00000019578	LALBA (ENSVVUG00000019572) #29	ENSVVUG00000019568	ENSVVUG00000019564	ENSVVUG00000019563	ENSVVUG00000019556 ##32	ENSVVUG00000019553 ##32	C12orf54 (ENSVVUG00000019545)	ZNF641 (ENSVVUG00000019539) #33
Canis_lupus	ANCESTRAL SPECIES	14	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.b.h	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000153832.f.y	ENSGT00940000153241.A.h	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B.c	ENSGT00940000162388.B.d.b	ENSGT00940000162388.B.d.a.b	ENSGT00940000162388.B.d.a.a	ENSGT00940000162388.A
Dingo	MODERN SPECIES	329	ENSCAFG00020013475	ENSCAFG00020013474	TUBA1A (ENSCAFG00020013458)	TUBA1B (ENSCAFG00020013431)	LMBR1L (ENSCAFG00020013423) #10	DHH (ENSCAFG00020013420) #11	RHEBL1 (ENSCAFG00020013417) #12	ENSCAFG00020013412 #13	PRKAG1 (ENSCAFG00020013408) #15	DDN (ENSCAFG00020013406) #16	WNT1 (ENSCAFG00020013401) #17	WNT10B (ENSCAFG00020013394) #18	ARF3 (ENSCAFG00020013389) #19	FKBP11 (ENSCAFG00020013388) #20	CCDC65 (ENSCAFG00020013387) #21	RND1 (ENSCAFG00020013386) #22	DDX23 (ENSCAFG00020013383) #23	CACNB3 (ENSCAFG00020013365) #24	ADCY6 (ENSCAFG00020013357) #25	TEX49 (ENSCAFG00020013356) #26	CCNT1 (ENSCAFG00020013349) #27	KANSL2 (ENSCAFG00020013339) #28	ENSCAFG00020013334	ENSCAFG00020013331	LALBA (ENSCAFG00020013310) #29	ENSCAFG00020013309	ENSCAFG00020013301	ENSCAFG00020013299	ENSCAFG00020013296	ENSCAFG00020013294	ENSCAFG00020013293 ##32
Dog	MODERN SPECIES	19	ENSCAFG00845020455 #8	PRPH (ENSCAFG00845020632) #9	ENSCAFG00845020819	TUBA1B (ENSCAFG00845021145)	LMBR1L (ENSCAFG00845021402) #10	DHH (ENSCAFG00845021487) #11	RHEBL1 (ENSCAFG00845021547) #12	KMT2D (ENSCAFG00845021787) #13	PRKAG1 (ENSCAFG00845022388) #15	DDN (ENSCAFG00845022517) #16	WNT1 (ENSCAFG00845022557) #17	WNT10B (ENSCAFG00845022647) #18	ENSCAFG00845022913 #19	FKBP11 (ENSCAFG00845023275) #20	CCDC65 (ENSCAFG00845023368) #21	RND1 (ENSCAFG00845023432) #22	DDX23 (ENSCAFG00845023512) #23	CACNB3 (ENSCAFG00845023805) #24	ADCY6 (ENSCAFG00845024352) #25	TEX49 (ENSCAFG00845024904) #26	CCNT1 (ENSCAFG00845024989) #27	KANSL2 (ENSCAFG00845025163) #28	LYZF2 (ENSCAFG00845025398)	LALBA (ENSCAFG00845025453) #29	OR5BS1P (ENSCAFG00845025525)	ENSCAFG00845025546	ENSCAFG00845025579	ENSCAFG00845025608	ENSCAFG00845025649	cOR8S14 (ENSCAFG00845025678)	cOR8S16 (ENSCAFG00845025719)
Felidae	ANCESTRAL SPECIES	2	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000153832.f.y	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000159881.a.a.b ##32	ENSGT00940000159881.a.b.b ##32	ENSGT00940000159881.a.a.a ##32	ENSGT00940000166925
Panthera	ANCESTRAL SPECIES		ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000153832.f.y	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B.e	ENSGT00940000162388.B.f	ENSGT00940000159881.a.a.b ##32	ENSGT00940000159881.a.b.b ##32	ENSGT00940000159881.a.a.a ##32
Panthera_a	ANCESTRAL SPECIES	5	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000153832.f.y	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B.e	ENSGT00940000162388.B.f	ENSGT00940000159881.a.a.b ##32	ENSGT00940000159881.a.b.b ##32	ENSGT00940000159881.a.a.a ##32
lion	MODERN SPECIES	7	ENSPLOG00000011582	TUBA1A (ENSPLOG00000011490)	ENSPLOG00000011430	TUBA1B (ENSPLOG00000011373)	LMBR1L (ENSPLOG00000011098) #10	DHH (ENSPLOG00000011041) #11	RHEBL1 (ENSPLOG00000010984) #12	KMT2D (ENSPLOG00000010784) #13	PRKAG1 (ENSPLOG00000010608) #15	DDN (ENSPLOG00000010565) #16	WNT1 (ENSPLOG00000010521) #17	WNT10B (ENSPLOG00000010411) #18	ARF3 (ENSPLOG00000010349) #19	FKBP11 (ENSPLOG00000010230) #20	CCDC65 (ENSPLOG00000010162) #21	RND1 (ENSPLOG00000010124) #22	DDX23 (ENSPLOG00000010090) #23	CACNB3 (ENSPLOG00000009811) #24	TEX49 (ENSPLOG00000009719) #26	ADCY6 (ENSPLOG00000009398) #25	KANSL2 (ENSPLOG00000009219) #28	ENSPLOG00000009151	ENSPLOG00000009119	LALBA (ENSPLOG00000009064) #29	OR5BS1P (ENSPLOG00000009032)	ENSPLOG00000009003	ENSPLOG00000008991 ##32	ENSPLOG00000008974 ##32	OR8S1 (ENSPLOG00000008958) ##32	ENSPLOG00000008937	C12orf54 (ENSPLOG00000008880)
leopard	MODERN SPECIES	77	TROAP (ENSPPRG00000023461) #8	PRPH (ENSPPRG00000022929) #9	ENSPPRG00000022793	ENSPPRG00000000268	TUBA1B (ENSPPRG00000001738)	LMBR1L (ENSPPRG00000002507) #10	DHH (ENSPPRG00000002928) #11	RHEBL1 (ENSPPRG00000003212) #12	PRKAG1 (ENSPPRG00000009137) #15	DDN (ENSPPRG00000009672) #16	WNT1 (ENSPPRG00000010414) #17	WNT10B (ENSPPRG00000011632) #18	ARF3 (ENSPPRG00000013155) #19	FKBP11 (ENSPPRG00000013896) #20	CCDC65 (ENSPPRG00000014354) #21	RND1 (ENSPPRG00000014543) #22	DDX23 (ENSPPRG00000015345) #23	CACNB3 (ENSPPRG00000022329) #24	ADCY6 (ENSPPRG00000002220) #25	TEX49 (ENSPPRG00000002478) #26	CCNT1 (ENSPPRG00000002985) #27	KANSL2 (ENSPPRG00000004003) #28	ENSPPRG00000004625	LALBA (ENSPPRG00000005035) #29	ENSPPRG00000020998	ENSPPRG00000021009	ENSPPRG00000021024 ##32	ENSPPRG00000021040 ##32	OR8S1 (ENSPPRG00000021056) ##32	ENSPPRG00000021065	ENSPPRG00000005898
Tiger	MODERN SPECIES	14	TROAP (ENSPTIG00000021948) #8	PRPH (ENSPTIG00000019617) #9	ENSPTIG00000018218	ENSPTIG00000016981	ENSPTIG00000007278	LMBR1L (ENSPTIG00000002708) #10	DHH (ENSPTIG00000020962) #11	RHEBL1 (ENSPTIG00000020473) #12	PRKAG1 (ENSPTIG00000008554) #15	DDN (ENSPTIG00000007916) #16	WNT1 (ENSPTIG00000007101) #17	WNT10B (ENSPTIG00000005637) #18	ARF3 (ENSPTIG00000002553) #19	FKBP11 (ENSPTIG00000021680) #20	CCDC65 (ENSPTIG00000021454) #21	RND1 (ENSPTIG00000020347) #22	DDX23 (ENSPTIG00000018873) #23	CACNB3 (ENSPTIG00000014703) #24	ADCY6 (ENSPTIG00000009376) #25	TEX49 (ENSPTIG00000007788) #26	CCNT1 (ENSPTIG00000002066) #27	KANSL2 (ENSPTIG00000018738) #28	ENSPTIG00000017690	LALBA (ENSPTIG00000016605) #29	ENSPTIG00000000424	ENSPTIG00000000411	OR8S1 (ENSPTIG00000000392) ##32	C12orf54 (ENSPTIG00000015156)	ENSPTIG00000000355 #31	ZNF641 (ENSPTIG00000013144) #33	ENSPTIG00000000286
Cat	MODERN SPECIES	238	PRPH (ENSFCAG00000014769) #9	TUBA1C (ENSFCAG00000037882)	ENSFCAG00000014767	TUBA1A (ENSFCAG00000038056)	LMBR1L (ENSFCAG00000000098) #10	DHH (ENSFCAG00000043756) #11	RHEBL1 (ENSFCAG00000000096) #12	KMT2D (ENSFCAG00000000093) #13	PRKAG1 (ENSFCAG00000000091) #15	DDN (ENSFCAG00000000090) #16	WNT1 (ENSFCAG00000000089) #17	WNT10B (ENSFCAG00000030007) #18	ARF3 (ENSFCAG00000037304) #19	FKBP11 (ENSFCAG00000035568) #20	CCDC65 (ENSFCAG00000000085) #21	RND1 (ENSFCAG00000000084) #22	DDX23 (ENSFCAG00000000082) #23	CACNB3 (ENSFCAG00000000080) #24	TEX49 (ENSFCAG00000022110) #26	ADCY6 (ENSFCAG00000000079) #25	ENSFCAG00000043415 #27	KANSL2 (ENSFCAG00000029449) #28	ENSFCAG00000034992	LALBA (ENSFCAG00000050644) #29	ENSFCAG00000026779 ##32	ENSFCAG00000023498 ##32	ENSFCAG00000026209 ##32	ENSFCAG00000031127 ##32	ENSFCAG00000026373 ##31	OR8S1 (ENSFCAG00000041999) ##32	ENSFCAG00000034432
Laurasiatheria_c	ANCESTRAL SPECIES	5	ENSGT00940000160203 #9	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.C.b	ENSGT00940000159881.a.a.a ##32	ENSGT00390000014843	ENSGT00940000162202.A #31	ENSGT00940000162202.B ##31
Equus	ANCESTRAL SPECIES	16	ENSGT00940000160203 #9	ENSGT00940000154457.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000153832.f.y	ENSGT00940000161726 #29	ENSGT00940000163803.e	ENSGT00940000162388.B	ENSGT00940000162388.C.b	ENSGT00940000166925.b	ENSGT00940000159881.a.a.a ##32	ENSGT00980000199472	ENSGT00390000014843
Donkey	MODERN SPECIES	14	PRPH (ENSEASG00005001134) #9	TUBA1C (ENSEASG00005001123)	ENSEASG00005027053	TUBA1B (ENSEASG00005029815)	LMBR1L (ENSEASG00005001084) #10	DHH (ENSEASG00005027549) #11	RHEBL1 (ENSEASG00005001042) #12	KMT2D (ENSEASG00005000816) #13	PRKAG1 (ENSEASG00005000627) #15	DDN (ENSEASG00005038212) #16	WNT1 (ENSEASG00005000530) #17	WNT10B (ENSEASG00005000528) #18	ARF3 (ENSEASG00005032704) #19	FKBP11 (ENSEASG00005037660) #20	CCDC65 (ENSEASG00005000473) #21	RND1 (ENSEASG00005000462) #22	DDX23 (ENSEASG00005000455) #23	CACNB3 (ENSEASG00005000426) #24	ADCY6 (ENSEASG00005000395) #25	TEX49 (ENSEASG00005000382) #26	CCNT1 (ENSEASG00005000368) #27	KANSL2 (ENSEASG00005000346) #28	ENSEASG00005000118 #29	ENSEASG00005000318	OR5BS1P (ENSEASG00005032536)	ENSEASG00005024483	ENSEASG00005033241	ENSEASG00005023527	ENSEASG00005031846	ENSEASG00005023526	OR8S1 (ENSEASG00005028324) ##32
Horse	MODERN SPECIES	27	TROAP (ENSECAG00000017926) #8	PRPH (ENSECAG00000010432) #9	TUBA1A (ENSECAG00000030778)	TUBA1B (ENSECAG00000059551)	ENSECAG00000033690	LMBR1L (ENSECAG00000011362) #10	DHH (ENSECAG00000010603) #11	RHEBL1 (ENSECAG00000001442) #12	KMT2D (ENSECAG00000017946) #13	PRKAG1 (ENSECAG00000011134) #15	DDN (ENSECAG00000007971) #16	WNT1 (ENSECAG00000009064) #17	WNT10B (ENSECAG00000008298) #18	FKBP11 (ENSECAG00000006658) #19	CCDC65 (ENSECAG00000022789) #21	RND1 (ENSECAG00000020971) #22	DDX23 (ENSECAG00000016681) #23	CACNB3 (ENSECAG00000012018) #24	ADCY6 (ENSECAG00000022288) #25	CCNT1 (ENSECAG00000015768) #27	KANSL2 (ENSECAG00000013540) #28	ENSECAG00000010121	LALBA (ENSECAG00000001401) #29	ENSECAG00000034026	OR8S15 (ENSECAG00000028893) ##32	OR8S34 (ENSECAG00000047119) ##31	OR8S33 (ENSECAG00000052992)	OR8S24 (ENSECAG00000045091)	ENSECAG00000050123	ENSECAG00000037359	C12orf54 (ENSECAG00000039802)
Chiroptera	ANCESTRAL SPECIES	4	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.s.a #15	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162202.A #31	ENSGT00940000162121 #33	ENSGT00730000111596 #34	ENSGT01100000263574.a	ENSGT00390000002978 #37	ENSGT00940000159366
Microchiroptera	ANCESTRAL SPECIES	2	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00950000183019.f.b.a.s.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162202.A #31	ENSGT00940000162121 #33	ENSGT00730000111596 #34	ENSGT00390000002978 #37	ENSGT00940000159366	ENSGT00940000155440.d
Greater horseshoe bat	MODERN SPECIES	1	TROAP (ENSRFEG00010010867) #8	PRPH (ENSRFEG00010010768) #9	ENSRFEG00010010573	TUBA1B (ENSRFEG00010010426)	LMBR1L (ENSRFEG00010010270) #10	DHH (ENSRFEG00010010213) #11	ENSRFEG00010010186	ENSRFEG00010009959 #13	ENSRFEG00010009659 #15	DDN (ENSRFEG00010009634) #16	WNT1 (ENSRFEG00010009601) #17	WNT10B (ENSRFEG00010009503) #18	FKBP11 (ENSRFEG00010009367) #20	CCDC65 (ENSRFEG00010009326) #21	ENSRFEG00010009293	RND1 (ENSRFEG00010009261) #22	DDX23 (ENSRFEG00010009126) #23	CACNB3 (ENSRFEG00010008761) #24	ADCY6 (ENSRFEG00010008619) #25	TEX49 (ENSRFEG00010008549) #26	CCNT1 (ENSRFEG00010008442) #27	ENSRFEG00010008258 #28	ENSRFEG00010008162	LALBA (ENSRFEG00010008073) #29	OR5BS1P (ENSRFEG00010008042)	ENSRFEG00010008030 #31	ZNF641 (ENSRFEG00010007923) #33	ENSRFEG00010007885 #34	CCDC184 (ENSRFEG00010007804) #37	ASB8 (ENSRFEG00010007697)	PFKM (ENSRFEG00010007343)
Microbat	MODERN SPECIES	1028	C1QL4 (ENSMLUG00000022468) #7	TROAP (ENSMLUG00000004347) #8	PRPH (ENSMLUG00000009808) #9	ENSMLUG00000024840	TUBA1A (ENSMLUG00000010845)	TUBA1B (ENSMLUG00000002622)	DHH (ENSMLUG00000008353) #11	RHEBL1 (ENSMLUG00000008343) #12	KMT2D (ENSMLUG00000011179) #13	PRKAG1 (ENSMLUG00000011156) #15	WNT1 (ENSMLUG00000023725) #17	WNT10B (ENSMLUG00000011105) #18	ARF3 (ENSMLUG00000029846) #19	FKBP11 (ENSMLUG00000011084) #20	CCDC65 (ENSMLUG00000011073) #21	RND1 (ENSMLUG00000011066) #22	ENSMLUG00000011033 #23	CACNB3 (ENSMLUG00000010986) #24	ADCY6 (ENSMLUG00000010943) #25	TEX49 (ENSMLUG00000010932) #26	CCNT1 (ENSMLUG00000010910) #27	KANSL2 (ENSMLUG00000012761) #28	ENSMLUG00000028552	ENSMLUG00000028621	ENSMLUG00000027828	LALBA (ENSMLUG00000010895) #29	OR5BS1P (ENSMLUG00000010889)	ENSMLUG00000022240 #31	ENSMLUG00000027444	ZNF641 (ENSMLUG00000003695) #33	ENSMLUG00000003687 #34
Megabat	MODERN SPECIES	2398																RND1 (ENSPVAG00000009824) #22	DDX23 (ENSPVAG00000009818) #23	CACNB3 (ENSPVAG00000009816) #24	ADCY6 (ENSPVAG00000009814) #25
Atlantogenata	ANCESTRAL SPECIES	33	ENSGT00390000012132 #8	ENSGT00940000160203 #9	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000159881.a.b.b ##32	ENSGT00940000159881.a.b.a ##32	ENSGT00940000163941.A	ENSGT00940000162202.C ##31
Afrotheria	ANCESTRAL SPECIES	25	ENSGT00390000012132 #8	ENSGT00940000160203 #9	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B.g	ENSGT00940000162388.B.h	ENSGT00940000162388.A	ENSGT00940000159881.a.b.b ##32	ENSGT00940000159881.a.b.a ##32	ENSGT00940000163941.A	ENSGT00940000162202.C ##31
Afrotheria_a	ANCESTRAL SPECIES	24	ENSGT00390000012132 #8	ENSGT00940000160203 #9	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000165147	ENSGT00940000161726 #29	ENSGT00940000163803	ENSGT00940000162388.B.g	ENSGT00940000162388.B.h	ENSGT00940000162388.A	ENSGT00940000159881.a.b.b ##32	ENSGT00940000159881.a.b.a ##32	ENSGT00940000163941.A	ENSGT00940000162202.C ##31
Elephant	MODERN SPECIES	196	TROAP (ENSLAFG00000017503) #8	PRPH (ENSLAFG00000003951) #9	ENSLAFG00000029073	TUBA1B (ENSLAFG00000010021)	LMBR1L (ENSLAFG00000010017) #10	DHH (ENSLAFG00000010011) #11	RHEBL1 (ENSLAFG00000010008) #12	KMT2D (ENSLAFG00000009989) #13	PRKAG1 (ENSLAFG00000005040) #15	DDN (ENSLAFG00000022385) #16	WNT1 (ENSLAFG00000004211) #17	WNT10B (ENSLAFG00000004210) #18	ARF3 (ENSLAFG00000004207) #19	FKBP11 (ENSLAFG00000004202) #20	CCDC65 (ENSLAFG00000004200) #21	RND1 (ENSLAFG00000010202) #22	DDX23 (ENSLAFG00000014227) #23	CACNB3 (ENSLAFG00000014224) #24	ADCY6 (ENSLAFG00000014218) #25	CCNT1 (ENSLAFG00000029881) #27	KANSL2 (ENSLAFG00000014200) #28	ENSLAFG00000030854	LALBA (ENSLAFG00000014199) #29	ENSLAFG00000027094	ENSLAFG00000021927	ENSLAFG00000031095	ENSLAFG00000026241	ENSLAFG00000030518 ##32	ENSLAFG00000029710 ##32	ENSLAFG00000029814 ##32	ENSLAFG00000027869 ##32
Hyrax	MODERN SPECIES	5107																RND1 (ENSPCAG00000002103) #22	DDX23 (ENSPCAG00000002016) #23	CACNB3 (ENSPCAG00000001967) #24
Tenrec	MODERN SPECIES	8954															ENSETEG00000017944 #21	RND1 (ENSETEG00000017942) #22
Xenarthra	ANCESTRAL SPECIES	73	ENSGT00390000012136	ENSGT00940000155969 #7	ENSGT00390000012132 #8	ENSGT00940000160203 #9	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00940000154457.a.a.o	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26
Armadillo	MODERN SPECIES	311	DNAJC22 (ENSDNOG00000001855)	C1QL4 (ENSDNOG00000017845) #7	TROAP (ENSDNOG00000017843) #8	PRPH (ENSDNOG00000035037) #9	ENSDNOG00000004121	ENSDNOG00000039572	RHEBL1 (ENSDNOG00000006437) #12	KMT2D (ENSDNOG00000041118) #13	PRKAG1 (ENSDNOG00000006640) #15	DDN (ENSDNOG00000042932) #16	WNT1 (ENSDNOG00000006617) #17	WNT10B (ENSDNOG00000006613) #18	ARF3 (ENSDNOG00000010454) #19	ENSDNOG00000035391 #20	CCDC65 (ENSDNOG00000006591) #21	RND1 (ENSDNOG00000035948) #22	DDX23 (ENSDNOG00000043176) #23	CACNB3 (ENSDNOG00000043665) #24	ADCY6 (ENSDNOG00000040679) #25	TEX49 (ENSDNOG00000048512) #26
Marsupialia	ANCESTRAL SPECIES	24	ENSGT00950000182825.A.a.b.a.a	ENSGT00950000182825.A.a.b.a.b.a.a.b	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00730000111596 #34	ENSGT00390000002978 #37	ENSGT00940000159366	ENSGT00940000155440.d	ENSGT00940000155489.b	ENSGT00940000155224	ENSGT00940000155473	ENSGT00940000159065
Marsupialia_b	ANCESTRAL SPECIES	12	ENSGT00950000182825.A.a.b.a.a	ENSGT00950000182825.A.a.b.a.b.a.a.b	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a.i #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00730000111596 #34	ENSGT00390000002978 #37	ENSGT00940000159366	ENSGT00940000155440.d	ENSGT00940000155489.b	ENSGT00940000155224	ENSGT00940000155473	ENSGT00940000159065
Diprotodontia	ANCESTRAL SPECIES	29	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.b	ENSGT00950000182825.A.a.b.a.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a.i #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00730000111596 #34	ENSGT00390000002978 #37	ENSGT00940000159366	ENSGT00940000155440.d	ENSGT00940000155489.b	ENSGT00940000155224	ENSGT00940000155473	ENSGT00940000159065
Diprotodontia_a	ANCESTRAL SPECIES	29	ENSGT00940000160203 #9	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.b	ENSGT00950000182825.A.a.b.a.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a.i #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #26	ENSGT00940000159544 #27	ENSGT00940000155808 #28	ENSGT00940000161726 #29	ENSGT00730000111596 #34	ENSGT00390000002978 #37	ENSGT00940000159366.g	ENSGT00940000155440.d	ENSGT00940000155489.b	ENSGT00940000155224	ENSGT00940000155473	ENSGT00940000159065
Common wonbat	MODERN SPECIES	1128	C1QL4 (ENSVURG00010006616) #7	PRPH (ENSVURG00010006599) #9	ENSVURG00010006593	ENSVURG00010006586	ENSVURG00010006581	LMBR1L (ENSVURG00010006566) #10	DHH (ENSVURG00010006554) #11	ENSVURG00010006474 #13	ENSVURG00010006434 #15	ENSVURG00010006430 #16	WNT1 (ENSVURG00010006417) #17	WNT10B (ENSVURG00010006404) #18	ARF3 (ENSVURG00010006396) #19	ENSVURG00010006389 #20	CCDC65 (ENSVURG00010006366) #21	RND1 (ENSVURG00010006356) #22	DDX23 (ENSVURG00010006330) #23	CACNB3 (ENSVURG00010006214) #24	ADCY6 (ENSVURG00010006156) #25	TEX49 (ENSVURG00010006146) #26	CCNT1 (ENSVURG00010006120) #27	KANSL2 (ENSVURG00010006093) #28	ENSVURG00010006084 #29	ASB8 (ENSVURG00010006046)	PFKM (ENSVURG00010005884)	SENP1 (ENSVURG00010005800)	COL2A1 (ENSVURG00010005638)	VDR (ENSVURG00010005603)	HDAC7 (ENSVURG00010005565)	SLC48A1 (ENSVURG00010005551)	RAPGEF3 (ENSVURG00010005514)
koala	MODERN SPECIES	309														ENSPCIG00000035336 #21	ENSPCIG00000037193 #20	RND1 (ENSPCIG00000002332) #22	DDX23 (ENSPCIG00000027691) #23	CACNB3 (ENSPCIG00000027695) #24	ADCY6 (ENSPCIG00000027700) #25	TEX49 (ENSPCIG00000027707) #26	CCNT1 (ENSPCIG00000027711) #27	KANSL2 (ENSPCIG00000027713) #28	LALBA (ENSPCIG00000004161) #29	ENSPCIG00000016478	ENSPCIG00000016482 #34	CCDC184 (ENSPCIG00000016483) #37	ENSPCIG00000032651	PFKM (ENSPCIG00000015868)	SENP1 (ENSPCIG00000014356)	COL2A1 (ENSPCIG00000035466)	VDR (ENSPCIG00000036228)
Wallaby	MODERN SPECIES	12211																RND1 (ENSMEUG00000000881) #22
Tasmanian devil	MODERN SPECIES	4	ENSSHAG00000009120	KCNH3 (ENSSHAG00000008412)	SPATS2 (ENSSHAG00000007068)	C1QL4 (ENSSHAG00000005722) #7	ENSSHAG00000005623 #8	PRPH (ENSSHAG00000005303) #9	ENSSHAG00000013379	ENSSHAG00000021106	TUBA1A (ENSSHAG00000025605)	LMBR1L (ENSSHAG00000005343) #10	DHH (ENSSHAG00000027357) #11	PRKAG1 (ENSSHAG00000003385) #15	ENSSHAG00000003208 #16	WNT1 (ENSSHAG00000001436) #17	WNT10B (ENSSHAG00000002602) #18	ENSSHAG00000030963 #22	ARF3 (ENSSHAG00000029764) #19	CCDC65 (ENSSHAG00000023185) #21	DDX23 (ENSSHAG00000006590) #23	ENSSHAG00000028151 #24	ENSSHAG00000007601 #26	ENSSHAG00000007370 #25	ENSSHAG00000006801 #27	ENSSHAG00000026560 #28	ENSSHAG00000003347	ENSSHAG00000001583	ENSSHAG00000024530 #37	ENSSHAG00000001392 #29	ENSSHAG00000029127 #34	ASB8 (ENSSHAG00000030428)	PFKM (ENSSHAG00000031357)
Platypus	MODERN SPECIES	1	C1QL4 (ENSOANG00000043062) #7	ENSOANG00000002869 #8	PRPH (ENSOANG00000043342) #9	TUBA1B (ENSOANG00000047868)	LMBR1L (ENSOANG00000000135) #10	DHH (ENSOANG00000045795) #11	ENSOANG00000000139 #12	ENSOANG00000036319 #13	PRKAG1 (ENSOANG00000029421) #15	WNT1 (ENSOANG00000040219) #17	ENSOANG00000049154 #16	WNT10B (ENSOANG00000047168) #18	ARF3 (ENSOANG00000047072) #19	FKBP11 (ENSOANG00000040027) #20	CCDC65 (ENSOANG00000047800) #21	RND1 (ENSOANG00000039020) #22	DDX23 (ENSOANG00000039844) #23	CACNB3 (ENSOANG00000012839) #24	ADCY6 (ENSOANG00000008088) #25	ENSOANG00000032004 #26	CCNT1 (ENSOANG00000047892) #27	KANSL2 (ENSOANG00000005844) #28	ENSOANG00000048101	TMBIM6 (ENSOANG00000041902)	FMNL3 (ENSOANG00000011885)	PRPF40B (ENSOANG00000037973)	ATG101 (ENSOANG00000046188)	NR4A1 (ENSOANG00000048887)	TAMALIN (ENSOANG00000047958)	ACVR1B (ENSOANG00000037991)	ACVRL1 (ENSOANG00000003970)