Amniota	ANCESTRAL SPECIES	30	ENSGT00950000182825.A.a.b.a.a	ENSGT00950000182825.A.a.b.a.b.a.b	ENSGT00950000183165.b.b #9	ENSGT00940000154457.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00530000063607.a	ENSGT01050000244940.a.a	ENSGT00940000159962	ENSGT00930000150980.b	ENSGT00390000010523.d	ENSGT00390000016511	ENSGT00950000183038.a.b.a	ENSGT00530000063734.b	ENSGT00940000157032
Mammalia	ANCESTRAL SPECIES	82	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b	ENSGT00940000154457.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00530000063607.a	ENSGT01050000244940.a.a	ENSGT00940000159962	ENSGT00930000150980.b	ENSGT00390000016511	ENSGT00950000183038.a.b.a	ENSGT00530000063734.b	ENSGT00940000157032	ENSGT00940000161446
Theria	ANCESTRAL SPECIES	2	ENSGT00940000154457.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00730000111596	ENSGT00390000002978 #36	ENSGT00940000159366 #37	ENSGT00940000155440.d	ENSGT00940000155489.b	ENSGT00940000155224	ENSGT00940000161281	ENSGT00940000155473
Eutheria	ANCESTRAL SPECIES	1	ENSGT00940000154457.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000159881.a.b.b	ENSGT00940000159881.a.b.a	ENSGT00940000163941.A	ENSGT00940000165904
Boreoeutheria	ANCESTRAL SPECIES	6	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00940000154457.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00560000078683	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000159881.a.b.b	ENSGT00940000159881.a.b.a	ENSGT00940000163941.A	ENSGT00940000162202.C ##32
Euarchontoglires	ANCESTRAL SPECIES	6	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00560000078683	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000159881.a.a.a	ENSGT00390000014843	ENSGT00940000162202.A #32	ENSGT00940000162202.B ##32
Euarchontoglires_A	ANCESTRAL SPECIES	5	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00390000014843	ENSGT00940000162202.A #32	ENSGT00940000162202.B ##32	ENSGT00940000162121 #33
Glires	ANCESTRAL SPECIES	4	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00390000014843	ENSGT00940000162202.A #32	ENSGT00940000162202.B ##32	ENSGT00940000162121 #33
Rodentia	ANCESTRAL SPECIES	5	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00390000014843	ENSGT00940000162202.A #32	ENSGT00940000162202.B ##32	ENSGT00940000162202.C ##32
Rodentia_A	ANCESTRAL SPECIES	4	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000159881.a.a.b	ENSGT00390000014843	ENSGT00940000162202.A #32	ENSGT00940000162202.B ##32	ENSGT00940000162202.C ##32
Hystricomorpha	ANCESTRAL SPECIES	9	ENSGT00940000160203 #8	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000159881.a.a.b	ENSGT00390000014843	ENSGT00940000162202.A #32	ENSGT00940000162202.B ##32	ENSGT00940000162121 #33
Hystricomorpha_a	ANCESTRAL SPECIES	7	ENSGT00390000012132 #7	ENSGT00940000160203 #8	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000159881.a.a.b	ENSGT00940000164920 #31	ENSGT00390000014843	ENSGT00940000162202.A #32	ENSGT00940000162202.B ##32
Hystricomorpha_b	ANCESTRAL SPECIES	78	ENSGT00940000155969	ENSGT00390000012132 #7	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.b.b.a	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808.c #29	ENSGT00940000161726 #30	ENSGT00940000164920 #31	ENSGT00390000014843	ENSGT00940000162202.A #32	ENSGT00940000162202.B ##32	ENSGT00940000162121 #33	ENSGT01100000263574.a	ENSGT00390000002978 #36	ENSGT00940000159366 #37
Degu	MODERN SPECIES	141	ENSODEG00000004276 #7	PRPH (ENSODEG00000004229) #8	ENSODEG00000004198 #9	LMBR1L (ENSODEG00000004152) #10	DHH (ENSODEG00000004129) #11	RHEBL1 (ENSODEG00000004107) #12	ENSODEG00000004083 #13	ENSODEG00000004064 #14	ENSODEG00000004046 #15	DDN (ENSODEG00000004034) #16	WNT1 (ENSODEG00000004027) #17	WNT10B (ENSODEG00000004020) #18	ARF3 (ENSODEG00000004009) #19	FKBP11 (ENSODEG00000003672) #20	CCDC65 (ENSODEG00000003640) #21	RND1 (ENSODEG00000003618) #22	DDX23 (ENSODEG00000003592) #23	CACNB3 (ENSODEG00000003562) #24	ADCY6 (ENSODEG00000003474) #25	ENSODEG00000003445 #26	TEX49 (ENSODEG00000003431) #27	ENSODEG00000003425 #28	ENSODEG00000003381 #29	LALBA (ENSODEG00000003342) #30	ENSODEG00000003309 #31	ENSODEG00000003293 #32	ZNF641 (ENSODEG00000003266) #33	ENSODEG00000003244 #34	ENSODEG00000003231 #35	CCDC184 (ENSODEG00000019270) #36	ASB8 (ENSODEG00000004323) #37
Long-tailed chinchilla	MODERN SPECIES	207	ENSCLAG00000004426	TROAP (ENSCLAG00000003387) #7	PRPH (ENSCLAG00000003332) #8	ENSCLAG00000004794	LMBR1L (ENSCLAG00000004048) #10	DHH (ENSCLAG00000003629) #11	RHEBL1 (ENSCLAG00000002358) #12	KMT2D (ENSCLAG00000003665) #13	PRKAG1 (ENSCLAG00000003459) #15	DDN (ENSCLAG00000003076) #16	WNT1 (ENSCLAG00000002943) #17	WNT10B (ENSCLAG00000002817) #18	ARF3 (ENSCLAG00000003101) #19	ENSCLAG00000003008 #20	CCDC65 (ENSCLAG00000002533) #21	RND1 (ENSCLAG00000003094) #22	DDX23 (ENSCLAG00000002986) #23	CACNB3 (ENSCLAG00000002138) #24	ADCY6 (ENSCLAG00000003898) #25	TEX49 (ENSCLAG00000003509) #27	CCNT1 (ENSCLAG00000003430) #28	ENSCLAG00000003022 #29	LALBA (ENSCLAG00000002878) #30	ENSCLAG00000017542	C12orf54 (ENSCLAG00000002462)	ENSCLAG00000017498 #32	ENSCLAG00000002661 ##32	ZNF641 (ENSCLAG00000002291) #33	OR10AD1 (ENSCLAG00000002006)	CCDC184 (ENSCLAG00000017612) #36	ASB8 (ENSCLAG00000003759) #37
Guinea pig	MODERN SPECIES	9	TROAP (ENSCPOG00000014679) #7	PRPH (ENSCPOG00000014881) #8	ENSCPOG00000031519	TUBA1B (ENSCPOG00000039484)	LMBR1L (ENSCPOG00000002999) #10	DHH (ENSCPOG00000002257) #11	RHEBL1 (ENSCPOG00000002998) #12	KMT2D (ENSCPOG00000002973) #13	PRKAG1 (ENSCPOG00000002966) #15	DDN (ENSCPOG00000002960) #16	WNT1 (ENSCPOG00000024490) #17	WNT10B (ENSCPOG00000035034) #18	ARF3 (ENSCPOG00000040787) #19	FKBP11 (ENSCPOG00000031801) #20	CCDC65 (ENSCPOG00000003221) #21	RND1 (ENSCPOG00000003220) #22	DDX23 (ENSCPOG00000003278) #23	CACNB3 (ENSCPOG00000003277) #24	ADCY6 (ENSCPOG00000030377) #25	TEX49 (ENSCPOG00000030293) #27	CCNT1 (ENSCPOG00000038705) #28	KANSL2 (ENSCPOG00000005760) #29	ENSCPOG00000024843	Lalba (ENSCPOG00000027342) #30	ENSCPOG00000033889	ENSCPOG00000000012	ENSCPOG00000013910	ENSCPOG00000039913	ENSCPOG00000040584 #31	ENSCPOG00000012475 #32	ENSCPOG00000036505 ##32
Naked mole-rat female	MODERN SPECIES	8	ENSHGLG00000007474	TUBA1B (ENSHGLG00000036029)	ENSHGLG00000046022	LMBR1L (ENSHGLG00000014791) #10	DHH (ENSHGLG00000034254) #11	RHEBL1 (ENSHGLG00000013261) #12	ENSHGLG00000050567 #13	PRKAG1 (ENSHGLG00000003937) #15	DDN (ENSHGLG00000004151) #16	WNT1 (ENSHGLG00000004305) #17	WNT10B (ENSHGLG00000005760) #18	ARF3 (ENSHGLG00000050677) #19	FKBP11 (ENSHGLG00000008146) #20	CCDC65 (ENSHGLG00000003786) #21	ENSHGLG00000048199	RND1 (ENSHGLG00000004112) #22	DDX23 (ENSHGLG00000004292) #23	CACNB3 (ENSHGLG00000007792) #24	ADCY6 (ENSHGLG00000004662) #25	TEX49 (ENSHGLG00000007195) #27	ENSHGLG00000003361 #28	ENSHGLG00000003714 #29	ENSHGLG00000033115	ENSHGLG00000050339	ENSHGLG00000004311 #30	OR5BS1P (ENSHGLG00000042484)	ENSHGLG00000020586	ENSHGLG00000020517	ENSHGLG00000047106	ENSHGLG00000036300 #32	ENSHGLG00000034108 ##32
Sciuridae	ANCESTRAL SPECIES	15	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00390000014843	ENSGT00940000162202.A #32	ENSGT00940000162202.B ##32	ENSGT00940000162202.C ##32	ENSGT00940000162121 #33
Marmotini	ANCESTRAL SPECIES	19	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000159881.a.b.a	ENSGT00940000162202.A #32	ENSGT00940000162202.B ##32	ENSGT00940000162202.C ##32	ENSGT00940000162121 #33
Alpin marmot	MODERN SPECIES	34	ENSMMMG00000023075 #7	ENSMMMG00000023070	PRPH (ENSMMMG00000023068) #8	TUBA1C (ENSMMMG00000023064)	TUBA1A (ENSMMMG00000023062)	LMBR1L (ENSMMMG00000023056) #10	DHH (ENSMMMG00000023054) #11	RHEBL1 (ENSMMMG00000023043) #12	ENSMMMG00000023038 #13	ENSMMMG00000023022 #13	ENSMMMG00000023013 #15	DDN (ENSMMMG00000023006) #16	WNT10B (ENSMMMG00000022992) #18	FKBP11 (ENSMMMG00000022980) #20	CCDC65 (ENSMMMG00000022974) #21	RND1 (ENSMMMG00000022971) #22	DDX23 (ENSMMMG00000022958) #23	CACNB3 (ENSMMMG00000022935) #24	ADCY6 (ENSMMMG00000022920) #25	TEX49 (ENSMMMG00000022917) #27	CCNT1 (ENSMMMG00000022910) #28	KANSL2 (ENSMMMG00000022904) #29	LALBA (ENSMMMG00000022893) #30	OR5BS1P (ENSMMMG00000022891)	ENSMMMG00000022889	ENSMMMG00000022886	ENSMMMG00000022885 #32	ENSMMMG00000022881 ##32	ENSMMMG00000022878 ##32	ZNF641 (ENSMMMG00000022873) #33	H1-7 (ENSMMMG00000022871)
Marmotini_b	ANCESTRAL SPECIES	11	ENSGT00940000160203 #8	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000159881.a.b.a	ENSGT00940000162202.A #32	ENSGT00940000162202.B ##32	ENSGT00940000162202.C ##32	ENSGT00940000162121 #33
Arctic ground squirrel	MODERN SPECIES	348	C1QL4 (ENSUPAG00010009646)	ENSUPAG00010009642	PRPH (ENSUPAG00010009633) #8	TUBA1C (ENSUPAG00010009626)	TUBA1B (ENSUPAG00010009604)	LMBR1L (ENSUPAG00010009579) #10	DHH (ENSUPAG00010009573) #11	RHEBL1 (ENSUPAG00010009539) #12	PRKAG1 (ENSUPAG00010009337) #15	DDN (ENSUPAG00010009325) #16	WNT1 (ENSUPAG00010009320) #17	WNT10B (ENSUPAG00010009270) #18	ARF3 (ENSUPAG00010009256) #19	FKBP11 (ENSUPAG00010009234) #20	CCDC65 (ENSUPAG00010009212) #21	RND1 (ENSUPAG00010009175) #22	DDX23 (ENSUPAG00010009132) #23	CACNB3 (ENSUPAG00010008993) #24	ADCY6 (ENSUPAG00010008904) #25	TEX49 (ENSUPAG00010008891) #27	CCNT1 (ENSUPAG00010008871) #28	KANSL2 (ENSUPAG00010008805) #29	ENSUPAG00010008799	LALBA (ENSUPAG00010008774) #30	OR5BS1P (ENSUPAG00010008767)
Squirrel	MODERN SPECIES	112	PRPH (ENSSTOG00000000282) #8	ENSSTOG00000020227	TUBA1B (ENSSTOG00000021170)	TUBA1A (ENSSTOG00000033698)	LMBR1L (ENSSTOG00000008752) #10	DHH (ENSSTOG00000000186) #11	RHEBL1 (ENSSTOG00000003967) #12	KMT2D (ENSSTOG00000003904) #13	PRKAG1 (ENSSTOG00000014648) #15	DDN (ENSSTOG00000028408) #16	WNT1 (ENSSTOG00000003902) #17	WNT10B (ENSSTOG00000004303) #18	ARF3 (ENSSTOG00000004295) #19	FKBP11 (ENSSTOG00000023089) #20	CCDC65 (ENSSTOG00000004267) #21	RND1 (ENSSTOG00000004257) #22	DDX23 (ENSSTOG00000004219) #23	CACNB3 (ENSSTOG00000004199) #24	ADCY6 (ENSSTOG00000004149) #25	TEX49 (ENSSTOG00000004134) #27	CCNT1 (ENSSTOG00000021508) #28	KANSL2 (ENSSTOG00000004118) #29	ENSSTOG00000019743	LALBA (ENSSTOG00000033863) #30	ENSSTOG00000032648	ENSSTOG00000033401	ENSSTOG00000005852 #31	ENSSTOG00000033341 ##32	ZNF641 (ENSSTOG00000001970) #33	OR10AD1 (ENSSTOG00000001963)	CCDC184 (ENSSTOG00000001957) #36
Eurasian red squirrel	MODERN SPECIES	14	TUBA1C (ENSSVLG00005014280)	TUBA1A (ENSSVLG00005014169)	TUBA1B (ENSSVLG00005014122)	LMBR1L (ENSSVLG00005014035) #10	DHH (ENSSVLG00005013965) #11	RHEBL1 (ENSSVLG00005013912) #12	ENSSVLG00005013789 #13	ENSSVLG00005013748 #13	PRKAG1 (ENSSVLG00005013661) #15	DDN (ENSSVLG00005013335) #16	WNT1 (ENSSVLG00005013249) #17	WNT10B (ENSSVLG00005013159) #18	ARF3 (ENSSVLG00005012987) #19	FKBP11 (ENSSVLG00005012794) #20	CCDC65 (ENSSVLG00005012567) #21	RND1 (ENSSVLG00005012510) #22	DDX23 (ENSSVLG00005012479) #23	CACNB3 (ENSSVLG00005012131) #24	ADCY6 (ENSSVLG00005011914) #25	TEX49 (ENSSVLG00005011832) #27	CCNT1 (ENSSVLG00005011525) #28	KANSL2 (ENSSVLG00005011410) #29	ENSSVLG00005011395	ENSSVLG00005011295	LALBA (ENSSVLG00005011187) #30	OR5BS1P (ENSSVLG00005011139)	C12orf54 (ENSSVLG00005011007)	ENSSVLG00005010951 #32	ZNF641 (ENSSVLG00005010861) #33	H1-7 (ENSSVLG00005010817)	OR10AD1 (ENSSVLG00005010756)
Rodentia_B	ANCESTRAL SPECIES	3	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000164920 #31	ENSGT00940000162202.A #32	ENSGT00940000162202.B ##32	ENSGT00940000162202.C ##32
Myomorpha	ANCESTRAL SPECIES	2	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000164920 #31	ENSGT00940000162202.A #32	ENSGT00940000162202.B ##32	ENSGT00940000162202.C ##32
Muroidea	ANCESTRAL SPECIES	31	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000164920 #31	ENSGT00940000162202.A #32	ENSGT00940000162202.B ##32	ENSGT00940000162202.C ##32
Muroidea_A	ANCESTRAL SPECIES	9	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000164920 #31	ENSGT00940000162202.A #32	ENSGT00940000162202.B ##32	ENSGT00940000162202.C ##32
Cricetidae	ANCESTRAL SPECIES	10	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000162202.A #32	ENSGT00940000162202.B ##32	ENSGT00940000162202.C ##32	ENSGT00940000162121 #33
Cricetidae_B	ANCESTRAL SPECIES	6	ENSGT00940000155969	ENSGT00390000012132 #7	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000162202.A #32	ENSGT00940000162202.B ##32	ENSGT00940000162202.C ##32	ENSGT00940000162121 #33
Prairie vole	MODERN SPECIES	2	ENSMOCG00000001429	Prph (ENSMOCG00000010753) #8	Tuba1c (ENSMOCG00000011887)	Lmbr1l (ENSMOCG00000012252) #10	Dhh (ENSMOCG00000000393) #11	Rhebl1 (ENSMOCG00000004742) #12	ENSMOCG00000016455 #13	ENSMOCG00000010694 #13	Prkag1 (ENSMOCG00000014481) #15	Ddn (ENSMOCG00000016200) #16	Wnt1 (ENSMOCG00000017789) #17	Wnt10b (ENSMOCG00000021764) #18	Arf3 (ENSMOCG00000020182) #19	Fkbp11 (ENSMOCG00000021965) #20	Ccdc65 (ENSMOCG00000000518) #21	Rnd1 (ENSMOCG00000015821) #22	Ddx23 (ENSMOCG00000018987) #23	Cacnb3 (ENSMOCG00000007254) #24	Adcy6 (ENSMOCG00000013100) #25	Tex49 (ENSMOCG00000022816) #27	Ccnt1 (ENSMOCG00000012712) #28	Kansl2 (ENSMOCG00000010801) #29	Lalba (ENSMOCG00000018652) #30	ENSMOCG00000009420 #31	ENSMOCG00000017621	Zfp641 (ENSMOCG00000019174) #33	ENSMOCG00000001245	ENSMOCG00000001175	Ccdc184 (ENSMOCG00000003788) #36	Asb8 (ENSMOCG00000017776) #37	Pfkm (ENSMOCG00000021333)
Northern American deer mouse	MODERN SPECIES	12	Troap (ENSPEMG00000009011) #7	Prph (ENSPEMG00000011347) #8	Tuba1c (ENSPEMG00000025359)	ENSPEMG00000029758	Dhh (ENSPEMG00000029701) #11	Rhebl1 (ENSPEMG00000018904) #12	ENSPEMG00000015247 #13	ENSPEMG00000015938 #13	Prkag1 (ENSPEMG00000015142) #15	Ddn (ENSPEMG00000010537) #16	Wnt1 (ENSPEMG00000024721) #17	Wnt10b (ENSPEMG00000015297) #18	Arf3 (ENSPEMG00000028616) #19	Fkbp11 (ENSPEMG00000009775) #20	Ccdc65 (ENSPEMG00000007520) #21	Rnd1 (ENSPEMG00000014224) #22	Ddx23 (ENSPEMG00000011305) #23	Cacnb3 (ENSPEMG00000014805) #24	Adcy6 (ENSPEMG00000009690) #25	Tex49 (ENSPEMG00000000495) #27	Ccnt1 (ENSPEMG00000016743) #28	Kansl2 (ENSPEMG00000008795) #29	Or11m3 (ENSPEMG00000024651)	Lalba (ENSPEMG00000007983) #30	ENSPEMG00000029296	Or8s8 (ENSPEMG00000030973)	Or8s10 (ENSPEMG00000027490)	ENSPEMG00000028993	Or8s2 (ENSPEMG00000026284) #32	Or8s5 (ENSPEMG00000026513) ##32	ENSPEMG00000012906 ##32
Cricetinae	ANCESTRAL SPECIES	3	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000164920 #31	ENSGT00940000162202.A #32	ENSGT00940000162202.B ##32	ENSGT00940000162121 #33
Golden Hamster	MODERN SPECIES	626	C1ql4 (ENSMAUG00000017527)	Troap (ENSMAUG00000015646) #7	Prph (ENSMAUG00000015253) #8	Lmbr1l (ENSMAUG00000014206) #10	Dhh (ENSMAUG00000013999) #11	Rhebl1 (ENSMAUG00000013128) #12	ENSMAUG00000012521 #13	ENSMAUG00000012028 #13	Prkag1 (ENSMAUG00000011761) #15	Ddn (ENSMAUG00000011464) #16	Wnt1 (ENSMAUG00000012154) #17	Wnt10b (ENSMAUG00000012082) #18	Arf3 (ENSMAUG00000011928) #19	Fkbp11 (ENSMAUG00000015766) #20	Ccdc65 (ENSMAUG00000015430) #21	Rnd1 (ENSMAUG00000015221) #22	Ddx23 (ENSMAUG00000012336) #23	Cacnb3 (ENSMAUG00000012005) #24	Adcy6 (ENSMAUG00000011342) #25	Tex49 (ENSMAUG00000010854) #27	Ccnt1 (ENSMAUG00000015960) #28	Kansl2 (ENSMAUG00000015668) #29	Lalba (ENSMAUG00000013490) #30	ENSMAUG00000012783 #31	Or8s2 (ENSMAUG00000015201) #32	Or8s16 (ENSMAUG00000011283)	Zfp641 (ENSMAUG00000010993) #33	H1f7 (ENSMAUG00000010839)	ENSMAUG00000014007	ENSMAUG00000019216	Ccdc184 (ENSMAUG00000010780) #36
Chinese hamster chok1gshd	MODERN SPECIES	1	Prph (ENSCGRG00001006972) #8	TUBA1C (ENSCGRG00001011520)	ENSCGRG00001007551	ENSCGRG00001011667	Lmbr1l (ENSCGRG00001008575) #10	Dhh (ENSCGRG00001012548) #11	Rhebl1 (ENSCGRG00001005736) #12	Kmt2d (ENSCGRG00001004692) #13	Prkag1 (ENSCGRG00001003063) #15	Ddn (ENSCGRG00001004300) #16	Wnt1 (ENSCGRG00001003166) #17	Wnt10b (ENSCGRG00001004015) #18	Arf3 (ENSCGRG00001004437) #19	Fkbp11 (ENSCGRG00001012678) #20	Ccdc65 (ENSCGRG00001014624) #21	Rnd1 (ENSCGRG00001004988) #22	Ddx23 (ENSCGRG00001015090) #23	Cacnb3 (ENSCGRG00001007469) #24	Adcy6 (ENSCGRG00001002443) #25	Tex49 (ENSCGRG00001002641) #27	Ccnt1 (ENSCGRG00001010472) #28	Kansl2 (ENSCGRG00001007756) #29	Or11m3 (ENSCGRG00001010245)	Lalba (ENSCGRG00001004333) #30	ENSCGRG00001004394	Or8s8 (ENSCGRG00001010259)	Or8s10 (ENSCGRG00001009319)	Or8s2 (ENSCGRG00001008762) #32	Or8s5 (ENSCGRG00001007209) ##32	Zfp641 (ENSCGRG00001008450) #33	H1f7 (ENSCGRG00001006632)
Murinae	ANCESTRAL SPECIES	10	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000164920 #31	ENSGT00940000162202.A #32	ENSGT00940000162202.B ##32	ENSGT00940000162202.C ##32
Mus	ANCESTRAL SPECIES	11	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000164920 #31	ENSGT00940000162202.A #32	ENSGT00940000162202.B ##32	ENSGT00940000162121 #33
Mus_A	ANCESTRAL SPECIES	13	ENSGT00390000012132 #7	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000164920 #31	ENSGT00940000162202.A #32	ENSGT00940000162202.B ##32	ENSGT00940000162121 #33
Mus_B	ANCESTRAL SPECIES	12	ENSGT00390000012132 #7	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000164920 #31	ENSGT00940000162202.A #32	ENSGT00940000162202.B ##32	ENSGT00940000159881.b
Mouse	MODERN SPECIES	6	Tuba1c (ENSMUSG00000043091)	Tuba1a (ENSMUSG00000072235)	Gm49450 (ENSMUSG00000116358)	Tuba1b (ENSMUSG00000023004)	Lmbr1l (ENSMUSG00000022999) #10	Dhh (ENSMUSG00000023000) #11	Rhebl1 (ENSMUSG00000023755) #12	Kmt2d (ENSMUSG00000048154) #13	Prkag1 (ENSMUSG00000067713) #15	Ddn (ENSMUSG00000059213) #16	Wnt1 (ENSMUSG00000022997) #17	Wnt10b (ENSMUSG00000022996) #18	Arf3 (ENSMUSG00000051853) #19	Fkbp11 (ENSMUSG00000003355) #20	Ccdc65 (ENSMUSG00000003354) #21	Rnd1 (ENSMUSG00000054855) #22	Ddx23 (ENSMUSG00000003360) #23	Cacnb3 (ENSMUSG00000003352) #24	Adcy6 (ENSMUSG00000022994) #25	Tex49 (ENSMUSG00000022993) #27	Ccnt1 (ENSMUSG00000011960) #28	Kansl2 (ENSMUSG00000022992) #29	Or11m3 (ENSMUSG00000054036)	Lalba (ENSMUSG00000022991) #30	OR5BS1P (ENSMUSG00000108728)	Or8s8 (ENSMUSG00000032987)	Or8s10 (ENSMUSG00000063780)	Or8s2 (ENSMUSG00000056184) #32	Or8s5 (ENSMUSG00000051793) ##32	Or8s16 (ENSMUSG00000062037)	Zfp641 (ENSMUSG00000022987) #33
Mus_C	ANCESTRAL SPECIES	17	ENSGT00390000012132 #7	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000164920 #31	ENSGT00940000162202.A #32	ENSGT00940000162202.B ##32	ENSGT00940000159881.b
Steppe mouse	MODERN SPECIES	3092	C1ql4 (ENSMSIG00000002578)	Troap (ENSMSIG00000002521) #7	Prph (ENSMSIG00000002429) #8	Tuba1c (ENSMSIG00000002410)	Tuba1a (ENSMSIG00000002382)	ENSMSIG00000002356	Lmbr1l (ENSMSIG00000002200) #10	Dhh (ENSMSIG00000002172) #11	ENSMSIG00000002088 #12	Prkag1 (ENSMSIG00000001568) #15	Ddn (ENSMSIG00000001553) #16	Wnt1 (ENSMSIG00000001511) #17	Wnt10b (ENSMSIG00000001386) #18	Arf3 (ENSMSIG00000001320) #19	Ccdc65 (ENSMSIG00000001269) #21	Rnd1 (ENSMSIG00000001241) #22	Ddx23 (ENSMSIG00000001169) #23	Cacnb3 (ENSMSIG00000000901) #24	Adcy6 (ENSMSIG00000000695) #25	Ccnt1 (ENSMSIG00000000619) #28	Kansl2 (ENSMSIG00000000531) #29	Or11m3 (ENSMSIG00000000513)	Lalba (ENSMSIG00000000500) #30	ENSMSIG00000000476	Or8s8 (ENSMSIG00000000461)	Or8s2 (ENSMSIG00000000448) #32	Or8s5 (ENSMSIG00000000437) ##32	ENSMSIG00000000424	ENSMSIG00000000412	Zfp641 (ENSMSIG00000000347) #33	H1f7 (ENSMSIG00000000314)
spretus	MODERN SPECIES	6	Dnajc22 (MGP_SPRETEiJ_G0021153)	C1ql4 (MGP_SPRETEiJ_G0021152)	Troap (MGP_SPRETEiJ_G0021151) #7	Prph (MGP_SPRETEiJ_G0021150) #8	Lmbr1l (MGP_SPRETEiJ_G0021149) #10	Dhh (MGP_SPRETEiJ_G0021148) #11	Rhebl1 (MGP_SPRETEiJ_G0021147) #12	Kmt2d (MGP_SPRETEiJ_G0021146) #13	Prkag1 (MGP_SPRETEiJ_G0021145) #15	Ddn (MGP_SPRETEiJ_G0021144) #16	Wnt1 (MGP_SPRETEiJ_G0021143) #17	Wnt10b (MGP_SPRETEiJ_G0021142) #18	Arf3 (MGP_SPRETEiJ_G0021141) #19	Fkbp11 (MGP_SPRETEiJ_G0021140) #20	Ccdc65 (MGP_SPRETEiJ_G0021139) #21	Rnd1 (MGP_SPRETEiJ_G0021138) #22	Ddx23 (MGP_SPRETEiJ_G0021137) #23	Cacnb3 (MGP_SPRETEiJ_G0021136) #24	Adcy6 (MGP_SPRETEiJ_G0021135) #25	Tex49 (MGP_SPRETEiJ_G0021134) #27	Ccnt1 (MGP_SPRETEiJ_G0021133) #28	Kansl2 (MGP_SPRETEiJ_G0021132) #29	Or11m3 (MGP_SPRETEiJ_G0021131)	Lalba (MGP_SPRETEiJ_G0021130) #30	Or8s8 (MGP_SPRETEiJ_G0021129)	Or8s10 (MGP_SPRETEiJ_G0021128)	MGP_SPRETEiJ_G0021127 #31	Or8s2 (MGP_SPRETEiJ_G0021126) #32	Or8s5 (MGP_SPRETEiJ_G0021125) ##32	MGP_SPRETEiJ_G0021124	Zfp641 (MGP_SPRETEiJ_G0021123) #33
Ryukyu mouse	MODERN SPECIES	6	Troap (MGP_CAROLIEiJ_G0020256) #7	Prph (MGP_CAROLIEiJ_G0020255) #8	MGP_CAROLIEiJ_G0020254	MGP_CAROLIEiJ_G0020253	Lmbr1l (MGP_CAROLIEiJ_G0020252) #10	Dhh (MGP_CAROLIEiJ_G0020251) #11	Rhebl1 (MGP_CAROLIEiJ_G0020250) #12	Kmt2d (MGP_CAROLIEiJ_G0020249) #13	Prkag1 (MGP_CAROLIEiJ_G0020248) #15	Ddn (MGP_CAROLIEiJ_G0020247) #16	Wnt1 (MGP_CAROLIEiJ_G0020246) #17	Wnt10b (MGP_CAROLIEiJ_G0020245) #18	Arf3 (MGP_CAROLIEiJ_G0020244) #19	Fkbp11 (MGP_CAROLIEiJ_G0020243) #20	Ccdc65 (MGP_CAROLIEiJ_G0020242) #21	Rnd1 (MGP_CAROLIEiJ_G0020241) #22	Ddx23 (MGP_CAROLIEiJ_G0020240) #23	Cacnb3 (MGP_CAROLIEiJ_G0020239) #24	Adcy6 (MGP_CAROLIEiJ_G0020238) #25	Tex49 (MGP_CAROLIEiJ_G0020237) #27	Ccnt1 (MGP_CAROLIEiJ_G0020236) #28	Kansl2 (MGP_CAROLIEiJ_G0020235) #29	Or11m3 (MGP_CAROLIEiJ_G0020234)	Lalba (MGP_CAROLIEiJ_G0020233) #30	Or8s8 (MGP_CAROLIEiJ_G0020232)	Or8s10 (MGP_CAROLIEiJ_G0020231)	MGP_CAROLIEiJ_G0020230 #31	Or8s2 (MGP_CAROLIEiJ_G0020229) #32	Or8s5 (MGP_CAROLIEiJ_G0020228) ##32	Zfp641 (MGP_CAROLIEiJ_G0020227) #33	H1f7 (MGP_CAROLIEiJ_G0020226)
Shrew mouse	MODERN SPECIES	8	Troap (MGP_PahariEiJ_G0020259) #7	MGP_PahariEiJ_G0020258	MGP_PahariEiJ_G0020256	MGP_PahariEiJ_G0020257	Lmbr1l (MGP_PahariEiJ_G0020255) #10	Dhh (MGP_PahariEiJ_G0020254) #11	Rhebl1 (MGP_PahariEiJ_G0020253) #12	Kmt2d (MGP_PahariEiJ_G0020252) #13	Prkag1 (MGP_PahariEiJ_G0020251) #15	Ddn (MGP_PahariEiJ_G0020250) #16	Wnt1 (MGP_PahariEiJ_G0020249) #17	Wnt10b (MGP_PahariEiJ_G0020248) #18	Arf3 (MGP_PahariEiJ_G0020247) #19	Fkbp11 (MGP_PahariEiJ_G0020246) #20	Ccdc65 (MGP_PahariEiJ_G0020245) #21	Rnd1 (MGP_PahariEiJ_G0020244) #22	Ddx23 (MGP_PahariEiJ_G0020243) #23	Cacnb3 (MGP_PahariEiJ_G0020242) #24	Adcy6 (MGP_PahariEiJ_G0020241) #25	Tex49 (MGP_PahariEiJ_G0020240) #27	Ccnt1 (MGP_PahariEiJ_G0020239) #28	Kansl2 (MGP_PahariEiJ_G0020238) #29	Or11m3 (MGP_PahariEiJ_G0020237)	Lalba (MGP_PahariEiJ_G0020236) #30	Or8s8 (MGP_PahariEiJ_G0020235)	Or8s10 (MGP_PahariEiJ_G0020234)	MGP_PahariEiJ_G0020233 #31	Or8s2 (MGP_PahariEiJ_G0020232) #32	Or8s5 (MGP_PahariEiJ_G0020231) ##32	Zfp641 (MGP_PahariEiJ_G0020230) #33	H1f7 (MGP_PahariEiJ_G0020229)
Rat	MODERN SPECIES	17	Prph (ENSRNOG00000052880) #8	Tuba1c (ENSRNOG00000021438)	AC114446.1 (ENSRNOG00000059545)	Tuba1a (ENSRNOG00000053468)	Lmbr1l (ENSRNOG00000061607) #10	Dhh (ENSRNOG00000053675) #11	Rhebl1 (ENSRNOG00000054385) #12	Prkag1 (ENSRNOG00000070180) #15	Prkag1 (ENSRNOG00000061499) #13	Ddn (ENSRNOG00000059605) #16	Wnt1 (ENSRNOG00000061818) #17	Wnt10b (ENSRNOG00000061238) #18	Arf3 (ENSRNOG00000054775) #19	Fkbp11 (ENSRNOG00000070637) #20	Ccdc65 (ENSRNOG00000058916) #21	Rnd1 (ENSRNOG00000059857) #22	Ddx23 (ENSRNOG00000060154) #23	Cacnb3 (ENSRNOG00000054274) #24	Adcy6 (ENSRNOG00000054757) #25	Tex49 (ENSRNOG00000057264) #27	Ccnt1 (ENSRNOG00000053054) #28	Kansl2 (ENSRNOG00000060185) #29	Or11m3 (ENSRNOG00000031503)	Lalba (ENSRNOG00000010811) #30	ENSRNOG00000062462	Or8s8 (ENSRNOG00000070632)	Or8s10 (ENSRNOG00000067109)	Or8s2 (ENSRNOG00000033022) #32	Or8s5 (ENSRNOG00000064461) ##32	Or8s16 (ENSRNOG00000067164) ##32	Zfp641 (ENSRNOG00000032447) #33
Upper Galilee mountains blind mole rat	MODERN SPECIES	1666				Lmbr1l (ENSNGAG00000000187) #10	Dhh (ENSNGAG00000018490) #11	Rhebl1 (ENSNGAG00000015540) #12	ENSNGAG00000012838 #13	ENSNGAG00000012125 #13	Prkag1 (ENSNGAG00000012811) #15	Ddn (ENSNGAG00000008326) #16	Wnt1 (ENSNGAG00000007571) #17	Wnt10b (ENSNGAG00000004862) #18	Arf3 (ENSNGAG00000015800) #19	ENSNGAG00000015440 #20	Ccdc65 (ENSNGAG00000008161) #21	Rnd1 (ENSNGAG00000001259) #22	Ddx23 (ENSNGAG00000019018) #23	Cacnb3 (ENSNGAG00000017756) #24	Adcy6 (ENSNGAG00000010902) #25	Tex49 (ENSNGAG00000008742) #27	Ccnt1 (ENSNGAG00000004672) #28	Kansl2 (ENSNGAG00000001029) #29	Or11m3 (ENSNGAG00000018584)	Lalba (ENSNGAG00000019393) #30	ENSNGAG00000014255 #31
Lesser Egyptian jerboa	MODERN SPECIES	157	Tuba1c (ENSJJAG00000010823)	Tuba1a (ENSJJAG00000010205)	Tuba1b (ENSJJAG00000003271)	ENSJJAG00000000483 #10	Dhh (ENSJJAG00000000231) #11	ENSJJAG00000023273 #13	ENSJJAG00000023190	ENSJJAG00000021738 #13	Prkag1 (ENSJJAG00000021260) #15	Ddn (ENSJJAG00000020419) #16	Wnt1 (ENSJJAG00000019856) #17	Wnt10b (ENSJJAG00000019751) #18	Arf3 (ENSJJAG00000019531) #19	Fkbp11 (ENSJJAG00000019024) #20	Ccdc65 (ENSJJAG00000018310) #21	Rnd1 (ENSJJAG00000018029) #22	Ddx23 (ENSJJAG00000018994) #23	Cacnb3 (ENSJJAG00000017876) #24	Adcy6 (ENSJJAG00000016023) #25	Tex49 (ENSJJAG00000014955) #27	Ccnt1 (ENSJJAG00000014633) #28	Kansl2 (ENSJJAG00000012644) #29	ENSJJAG00000013730	Lalba (ENSJJAG00000011329) #30	ENSJJAG00000003638 #31	ENSJJAG00000001609 ##32	Zfp641 (ENSJJAG00000023912) #33	ENSJJAG00000014189	ENSJJAG00000023686	Ccdc184 (ENSJJAG00000014181) #36	ENSJJAG00000023643 #37
Kangaroo rat	MODERN SPECIES	361	Prph (ENSDORG00000004920) #8	Tuba1c (ENSDORG00000015065)	Tuba1a (ENSDORG00000006812)	ENSDORG00000000156	ENSDORG00000008221 #10	Dhh (ENSDORG00000024818) #11	Rhebl1 (ENSDORG00000006513) #12	ENSDORG00000027776 #13	ENSDORG00000024758 #13	Prkag1 (ENSDORG00000006505) #15	Ddn (ENSDORG00000028862) #16	Wnt1 (ENSDORG00000007735) #17	Wnt10b (ENSDORG00000010403) #18	Arf3 (ENSDORG00000024681) #19	Ccdc65 (ENSDORG00000012748) #21	Rnd1 (ENSDORG00000023400) #22	Ddx23 (ENSDORG00000012659) #23	Cacnb3 (ENSDORG00000012657) #24	Adcy6 (ENSDORG00000005171) #25	Tex49 (ENSDORG00000023756) #27	Ccnt1 (ENSDORG00000002854) #28	Kansl2 (ENSDORG00000001180) #29	Lalba (ENSDORG00000009838) #30	ENSDORG00000002609 #31	ENSDORG00000025213 ##32	Zfp641 (ENSDORG00000011810) #33	ENSDORG00000027881	ENSDORG00000027511	Ccdc184 (ENSDORG00000000096) #36	Asb8 (ENSDORG00000027268) #37	Pfkm (ENSDORG00000000094)
Lagomorpha	ANCESTRAL SPECIES	81	ENSGT00390000012132 #7	ENSGT00940000160203 #8	ENSGT00940000154457.a.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.k #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00390000014843
Pika	MODERN SPECIES	9189														WNT10B (ENSOPRG00000006825) #18	CCDC65 (ENSOPRG00000006811) #21	RND1 (ENSOPRG00000006802) #22
Rabbit	MODERN SPECIES	15	TUBA1C (ENSOCUG00000028032)	ENSOCUG00000023038	ENSOCUG00000027812	LMBR1L (ENSOCUG00000011586) #10	DHH (ENSOCUG00000029219) #11	RHEBL1 (ENSOCUG00000016881) #12	KMT2D (ENSOCUG00000006202) #13	ENSOCUG00000008409 #15	DDN (ENSOCUG00000008404) #16	WNT1 (ENSOCUG00000026066) #17	WNT10B (ENSOCUG00000009580) #18	ARF3 (ENSOCUG00000039073) #19	ENSOCUG00000009574 #20	CCDC65 (ENSOCUG00000026025) #21	ENSOCUG00000035268 #21	RND1 (ENSOCUG00000025362) #22	DDX23 (ENSOCUG00000001414) #23	CACNB3 (ENSOCUG00000007401) #24	TEX49 (ENSOCUG00000007390) #27	ADCY6 (ENSOCUG00000007394) #25	CCNT1 (ENSOCUG00000007383) #28	KANSL2 (ENSOCUG00000007379) #29	LYZG (ENSOCUG00000015834) #30	ENSOCUG00000008989	ENSOCUG00000038424	ENSOCUG00000030065	ENSOCUG00000021510 #32	BMP2 (ENSOCUG00000011674)	HAO1 (ENSOCUG00000011539)	TMX4 (ENSOCUG00000007336)	ENSOCUG00000038367
Tree shrew	MODERN SPECIES	3505													ARF3 (ENSTBEG00000017353) #19	FKBP11 (ENSTBEG00000017269) #20	CCDC65 (ENSTBEG00000017191) #21	RND1 (ENSTBEG00000017126) #22	DDX23 (ENSTBEG00000016909) #23	CACNB3 (ENSTBEG00000016783) #24
Primates	ANCESTRAL SPECIES	6	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00560000078683	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000159881.a.a.a	ENSGT00390000014843	ENSGT00940000162202.A #32	ENSGT00940000162202.B ##32	ENSGT00940000162121 #33	ENSGT00730000111596	ENSGT01100000263574.a
Haplorrhini	ANCESTRAL SPECIES	3	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00560000078683	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000159881.a.a.a	ENSGT00390000014843	ENSGT00940000162202.A #32	ENSGT00940000162121 #33	ENSGT00730000111596	ENSGT01100000263574.a	ENSGT00390000002978 #36
Simiiformes	ANCESTRAL SPECIES	4	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.l.a	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00560000078683	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000159881.a.a.a	ENSGT00390000014843	ENSGT00940000162202.A #32	ENSGT00940000162121 #33	ENSGT00730000111596	ENSGT01100000263574.a	ENSGT00390000002978 #36
Catarrhini	ANCESTRAL SPECIES	4	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00560000078683	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b.e #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000159881.a.a.a	ENSGT00390000014843	ENSGT00940000162121 #33	ENSGT00730000111596	ENSGT01100000263574.a	ENSGT00910000147030	ENSGT00390000002978 #36
Hominoidea	ANCESTRAL SPECIES	5	ENSGT00390000012132 #7	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b.e #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000159881.a.a.a	ENSGT00390000014843	ENSGT00940000162121 #33	ENSGT00730000111596	ENSGT01100000263574.a	ENSGT00910000147030	ENSGT00390000002978 #36
Gibbon	MODERN SPECIES	23	PRPH (ENSNLEG00000017833) #8	ENSNLEG00000028012	ENSNLEG00000017835	TUBA1A (ENSNLEG00000032990)	LMBR1L (ENSNLEG00000017843) #10	DHH (ENSNLEG00000017846) #11	RHEBL1 (ENSNLEG00000017847) #12	KMT2D (ENSNLEG00000017849) #13	PRKAG1 (ENSNLEG00000017850) #15	DDN (ENSNLEG00000017854) #16	WNT1 (ENSNLEG00000017855) #17	ENSNLEG00000030793 #18	ENSNLEG00000030380 #19	CCDC65 (ENSNLEG00000017860) #21	FKBP11 (ENSNLEG00000017862) #20	RND1 (ENSNLEG00000028550) #22	DDX23 (ENSNLEG00000017864) #23	CACNB3 (ENSNLEG00000017866) #24	ADCY6 (ENSNLEG00000017868) #25	ENSNLEG00000034433 #27	CCNT1 (ENSNLEG00000017873) #28	ENSNLEG00000017874 #29	LALBA (ENSNLEG00000017877) #30	ZNF641 (ENSNLEG00000017881) #33	ENSNLEG00000017883	ENSNLEG00000017884	CCDC184 (ENSNLEG00000019275) #36	ENSNLEG00000028267	ASB8 (ENSNLEG00000017885) #37	PFKM (ENSNLEG00000017887)	SENP1 (ENSNLEG00000017891)
Hominidae	ANCESTRAL SPECIES	4	ENSGT00390000012132 #7	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b.e #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000159881.a.a.a	ENSGT00390000014843	ENSGT00940000162121 #33	ENSGT00730000111596	ENSGT01100000263574.a	ENSGT00910000147030	ENSGT00390000002978 #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	5	ENSGT00390000012132 #7	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b.e #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000159881.a.a.a	ENSGT00390000014843	ENSGT00950000182907.a.b.b.b.tb.b	ENSGT00940000162121 #33	ENSGT00730000111596	ENSGT01100000263574.a	ENSGT00910000147030
Homo/Pan group	ANCESTRAL SPECIES	6	ENSGT00390000012132 #7	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b.e #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000159881.a.a.a	ENSGT00390000014843	ENSGT00950000182907.a.b.b.b.tb.b	ENSGT00940000162121 #33	ENSGT00730000111596	ENSGT01100000263574.a	ENSGT00910000147030
Pan	ANCESTRAL SPECIES	4	ENSGT00390000012132 #7	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b.e #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000159881.a.a.a	ENSGT00950000182907.a.b.b.b.tb.b	ENSGT00940000162121 #33	ENSGT00730000111596	ENSGT01100000263574.a	ENSGT00910000147030	ENSGT00390000002978 #36	ENSGT00950000183070.a.b.g.b.a.c.a
Bonobo	MODERN SPECIES	3	PRPH (ENSPPAG00000034520) #8	TUBA1C (ENSPPAG00000033269)	ENSPPAG00000025479	TUBA1B (ENSPPAG00000042451)	LMBR1L (ENSPPAG00000043358) #10	DHH (ENSPPAG00000016771) #11	RHEBL1 (ENSPPAG00000034151) #12	KMT2D (ENSPPAG00000002127) #13	PRKAG1 (ENSPPAG00000041021) #15	DDN (ENSPPAG00000032934) #16	WNT1 (ENSPPAG00000026068) #17	WNT10B (ENSPPAG00000035557) #18	ARF3 (ENSPPAG00000029662) #19	CCDC65 (ENSPPAG00000043558) #21	FKBP11 (ENSPPAG00000038416) #20	RND1 (ENSPPAG00000038456) #22	DDX23 (ENSPPAG00000037807) #23	CACNB3 (ENSPPAG00000011855) #24	ADCY6 (ENSPPAG00000030921) #25	TEX49 (ENSPPAG00000036148) #27	CCNT1 (ENSPPAG00000032804) #28	ENSPPAG00000026612 #29	LALBA (ENSPPAG00000030532) #30	OR8S1 (ENSPPAG00000037092)	ZNF641 (ENSPPAG00000043802) #33	H1-7 (ENSPPAG00000012971)	OR10AD1 (ENSPPAG00000006971)	ENSPPAG00000031405	CCDC184 (ENSPPAG00000001304) #36	ENSPPAG00000031624	ASB8 (ENSPPAG00000035275) #37
Chimpanzee	MODERN SPECIES	3	PRPH (ENSPTRG00000004903) #8	TUBA1C (ENSPTRG00000048544)	TUBA1A (ENSPTRG00000004901)	TUBA1B (ENSPTRG00000045808)	LMBR1L (ENSPTRG00000004899) #10	DHH (ENSPTRG00000045260) #11	RHEBL1 (ENSPTRG00000004897) #12	KMT2D (ENSPTRG00000004896) #13	PRKAG1 (ENSPTRG00000004895) #15	DDN (ENSPTRG00000004894) #16	WNT1 (ENSPTRG00000004893) #17	WNT10B (ENSPTRG00000004892) #18	ARF3 (ENSPTRG00000004891) #19	CCDC65 (ENSPTRG00000004889) #21	FKBP11 (ENSPTRG00000004890) #20	RND1 (ENSPTRG00000004888) #22	DDX23 (ENSPTRG00000004887) #23	CACNB3 (ENSPTRG00000004886) #24	ADCY6 (ENSPTRG00000004885) #25	TEX49 (ENSPTRG00000041051) #27	CCNT1 (ENSPTRG00000004883) #28	KANSL2 (ENSPTRG00000004882) #29	LALBA (ENSPTRG00000004881) #30	OR8S1 (ENSPTRG00000023679)	ENSPTRG00000004879	ZNF641 (ENSPTRG00000045476) #33	H1-7 (ENSPTRG00000004877)	ENSPTRG00000029704	ENSPTRG00000045723	CCDC184 (ENSPTRG00000029702) #36	ENSPTRG00000048129
Human	MODERN SPECIES	3	TUBA1C (ENSG00000167553)	TUBA1A (ENSG00000167552)	TUBA1B (ENSG00000123416)	LMBR1L (ENSG00000139636) #10	DHH (ENSG00000139549) #11	RHEBL1 (ENSG00000167550) #12	KMT2D (ENSG00000167548) #13	PRKAG1 (ENSG00000181929) #15	DDN (ENSG00000181418) #16	WNT1 (ENSG00000125084) #17	WNT10B (ENSG00000169884) #18	ARF3 (ENSG00000134287) #19	FKBP11 (ENSG00000134285) #20	CCDC65 (ENSG00000139537) #21	ENSG00000272822	RND1 (ENSG00000172602) #22	DDX23 (ENSG00000174243) #23	CACNB3 (ENSG00000167535) #24	ADCY6 (ENSG00000174233) #25	TEX49 (ENSG00000257987) #27	CCNT1 (ENSG00000129315) #28	KANSL2 (ENSG00000139620) #29	LALBA (ENSG00000167531) #30	OR5BS1P (ENSG00000198678)	OR8S1 (ENSG00000284723)	C12orf54 (ENSG00000177627)	ANP32D (ENSG00000139223)	ZNF641 (ENSG00000167528) #33	H1-7 (ENSG00000187166)	OR10AD1 (ENSG00000172640)	CCDC184 (ENSG00000177875) #36
Gorilla	MODERN SPECIES	3	DNAJC22 (ENSGGOG00000024291)	C1QL4 (ENSGGOG00000012547)	TROAP (ENSGGOG00000012528) #7	PRPH (ENSGGOG00000025284) #8	TUBA1C (ENSGGOG00000000769)	TUBA1A (ENSGGOG00000005381)	TUBA1B (ENSGGOG00000028554)	LMBR1L (ENSGGOG00000028106) #10	DHH (ENSGGOG00000007990) #11	RHEBL1 (ENSGGOG00000007983) #12	KMT2D (ENSGGOG00000007949) #13	PRKAG1 (ENSGGOG00000011283) #15	DDN (ENSGGOG00000011280) #16	WNT1 (ENSGGOG00000011272) #17	WNT10B (ENSGGOG00000011269) #18	RND1 (ENSGGOG00000007068) #22	DDX23 (ENSGGOG00000015252) #23	CACNB3 (ENSGGOG00000015239) #24	ADCY6 (ENSGGOG00000002316) #25	TEX49 (ENSGGOG00000041865) #27	CCNT1 (ENSGGOG00000013082) #28	ENSGGOG00000013077 #29	LALBA (ENSGGOG00000025788) #30	OR8S1 (ENSGGOG00000003022)	C12orf54 (ENSGGOG00000016663)	ZNF641 (ENSGGOG00000013643) #33	H1-7 (ENSGGOG00000025202)	OR10AD1 (ENSGGOG00000008264)	ENSGGOG00000023950	CCDC184 (ENSGGOG00000026078) #36	ENSGGOG00000041361
Orangutan	MODERN SPECIES	3	TROAP (ENSPPYG00000004485) #7	PRPH (ENSPPYG00000004483) #8	TUBA1C (ENSPPYG00000004482)	TUBA1A (ENSPPYG00000004481)	LMBR1L (ENSPPYG00000004471) #10	DHH (ENSPPYG00000004480) #11	RHEBL1 (ENSPPYG00000004479) #12	ENSPPYG00000029928 #13	PRKAG1 (ENSPPYG00000004477) #15	DDN (ENSPPYG00000004476) #16	WNT1 (ENSPPYG00000004475) #17	WNT10B (ENSPPYG00000004474) #18	ARF3 (ENSPPYG00000004473) #19	FKBP11 (ENSPPYG00000004472) #20	CCDC65 (ENSPPYG00000004470) #21	RND1 (ENSPPYG00000004469) #22	DDX23 (ENSPPYG00000004468) #23	CACNB3 (ENSPPYG00000004467) #24	ADCY6 (ENSPPYG00000004466) #25	TEX49 (ENSPPYG00000032235) #27	CCNT1 (ENSPPYG00000036637) #28	KANSL2 (ENSPPYG00000004464) #29	LALBA (ENSPPYG00000004463) #30	OR5BS1P (ENSPPYG00000004462)	ENSPPYG00000004461	C12orf54 (ENSPPYG00000004460)	ANP32D (ENSPPYG00000004459)	ZNF641 (ENSPPYG00000036320) #33	CCDC184 (ENSPPYG00000004455) #36	ENSPPYG00000038285	ASB8 (ENSPPYG00000038698) #37
Cercopithecidae	ANCESTRAL SPECIES	3	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00560000078683	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b.e #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000159881.a.a.a	ENSGT00390000014843	ENSGT00940000162202.A #32	ENSGT00940000162121 #33	ENSGT00730000111596	ENSGT01100000263574.a	ENSGT00910000147030
Rhinopithecus	ANCESTRAL SPECIES	4	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00560000078683	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b.e #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000159881.a.a.a	ENSGT00390000014843	ENSGT00390000007552.f.x.z	ENSGT00940000162121 #33	ENSGT01100000263574.a	ENSGT00910000147030	ENSGT00390000002978 #36	ENSGT00950000183070.a.b.g.b.a.d
Black snub-nosed monkey	MODERN SPECIES	1192	TROAP (ENSRBIG00000000994) #7	PRPH (ENSRBIG00000042471) #8	ENSRBIG00000026839	LMBR1L (ENSRBIG00000042873) #10	DHH (ENSRBIG00000033154) #11	RHEBL1 (ENSRBIG00000042716) #12	KMT2D (ENSRBIG00000028892) #13	PRKAG1 (ENSRBIG00000028288) #15	DDN (ENSRBIG00000028117) #16	WNT1 (ENSRBIG00000040400) #17	WNT10B (ENSRBIG00000031686) #18	ARF3 (ENSRBIG00000044317) #19	ENSRBIG00000040877	CCDC65 (ENSRBIG00000031835) #21	FKBP11 (ENSRBIG00000034219) #20	RND1 (ENSRBIG00000008703) #22	DDX23 (ENSRBIG00000040362) #23	CACNB3 (ENSRBIG00000027539) #24	ADCY6 (ENSRBIG00000020775) #25	TEX49 (ENSRBIG00000040348) #27	CCNT1 (ENSRBIG00000034059) #28	KANSL2 (ENSRBIG00000031481) #29	LALBA (ENSRBIG00000007431) #30	OR8S1 (ENSRBIG00000033095)	C12orf54 (ENSRBIG00000039534)	ENSRBIG00000032258	ZNF641 (ENSRBIG00000032093) #33
Golden snub-nosed monkey	MODERN SPECIES	2523	TUBA1C (ENSRROG00000041724)	ENSRROG00000001182	TUBA1B (ENSRROG00000042978)	LMBR1L (ENSRROG00000044118) #10	DHH (ENSRROG00000034891) #11	RHEBL1 (ENSRROG00000036462) #12	KMT2D (ENSRROG00000035460) #13	PRKAG1 (ENSRROG00000037662) #15	DDN (ENSRROG00000032736) #16	WNT1 (ENSRROG00000006398) #17	WNT10B (ENSRROG00000044970) #18	ARF3 (ENSRROG00000042065) #19	ENSRROG00000044310	CCDC65 (ENSRROG00000029231) #21	FKBP11 (ENSRROG00000026680) #20	RND1 (ENSRROG00000023951) #22	DDX23 (ENSRROG00000028964) #23	CACNB3 (ENSRROG00000041133) #24	ADCY6 (ENSRROG00000043634) #25
Cercopithecinae	ANCESTRAL SPECIES	7	ENSGT00390000012132 #7	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b.e #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000159881.a.a.a	ENSGT00390000014843	ENSGT00940000162202.A #32	ENSGT00940000162121 #33	ENSGT00730000111596	ENSGT00390000002978 #36	ENSGT00950000183070.a.b.g.b.a.d
Vervet Monkey	MODERN SPECIES	2	PRPH (ENSCSAG00000006146) #8	TUBA1C (ENSCSAG00000006152)	TUBA1A (ENSCSAG00000006153)	ENSCSAG00000006157	LMBR1L (ENSCSAG00000006161) #10	DHH (ENSCSAG00000006163) #11	RHEBL1 (ENSCSAG00000006168) #12	KMT2D (ENSCSAG00000006178) #13	PRKAG1 (ENSCSAG00000006199) #15	DDN (ENSCSAG00000006208) #16	WNT1 (ENSCSAG00000006212) #17	WNT10B (ENSCSAG00000006220) #18	ARF3 (ENSCSAG00000006224) #19	FKBP11 (ENSCSAG00000006226) #20	CCDC65 (ENSCSAG00000006233) #21	RND1 (ENSCSAG00000006239) #22	DDX23 (ENSCSAG00000006240) #23	CACNB3 (ENSCSAG00000006242) #24	ADCY6 (ENSCSAG00000006246) #25	TEX49 (ENSCSAG00000006250) #27	CCNT1 (ENSCSAG00000006255) #28	KANSL2 (ENSCSAG00000006258) #29	LALBA (ENSCSAG00000006263) #30	OR5BS1P (ENSCSAG00000006266)	OR8S1 (ENSCSAG00000006270)	C12orf54 (ENSCSAG00000006273)	ENSCSAG00000006275	ENSCSAG00000019252 #32	ZNF641 (ENSCSAG00000006278) #33	H1-7 (ENSCSAG00000019251)	ENSCSAG00000006285
Cercopithecinae_a	ANCESTRAL SPECIES	7	ENSGT00390000012132.c.a #7	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b.e #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000159881.a.a.a	ENSGT00390000014843	ENSGT00940000162121 #33	ENSGT00730000111596	ENSGT00390000002978 #36	ENSGT00950000183070.a.b.g.b.a.d	ENSGT00940000159366 #37
Macaca	ANCESTRAL SPECIES	6	ENSGT00390000012132.c.a #7	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b.e #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000159881.a.a.a	ENSGT00390000014843	ENSGT00940000162121 #33	ENSGT00730000111596	ENSGT00390000002978 #36	ENSGT00950000183070.a.b.g.b.a.d	ENSGT00940000159366 #37
Pig-tailed macaque	MODERN SPECIES	196	TROAP (ENSMNEG00000039086) #7	PRPH (ENSMNEG00000033632) #8	TUBA1C (ENSMNEG00000000827)	TUBA1B (ENSMNEG00000031206)	LMBR1L (ENSMNEG00000029874) #10	DHH (ENSMNEG00000033172) #11	RHEBL1 (ENSMNEG00000032195) #12	KMT2D (ENSMNEG00000034150) #13	PRKAG1 (ENSMNEG00000032221) #15	DDN (ENSMNEG00000036264) #16	WNT1 (ENSMNEG00000043908) #17	WNT10B (ENSMNEG00000022399) #18	ARF3 (ENSMNEG00000032173) #19	CCDC65 (ENSMNEG00000043967) #21	FKBP11 (ENSMNEG00000030125) #20	RND1 (ENSMNEG00000038480) #22	DDX23 (ENSMNEG00000040016) #23	CACNB3 (ENSMNEG00000029365) #24	ADCY6 (ENSMNEG00000043535) #25	TEX49 (ENSMNEG00000028091) #27	CCNT1 (ENSMNEG00000042465) #28	KANSL2 (ENSMNEG00000039608) #29	LALBA (ENSMNEG00000034387) #30	OR8S1 (ENSMNEG00000032997)	C12orf54 (ENSMNEG00000038960)	ENSMNEG00000032933	ENSMNEG00000028722	ZNF641 (ENSMNEG00000044922) #33	ENSMNEG00000045356	CCDC184 (ENSMNEG00000000953) #36	ASB8 (ENSMNEG00000036379) #37
Macaca_a	ANCESTRAL SPECIES	6	ENSGT00940000155969	ENSGT00390000012132.c.a #7	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b.e #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000159881.a.a.a	ENSGT00390000014843	ENSGT00940000162121 #33	ENSGT00730000111596	ENSGT00390000002978 #36	ENSGT00940000159366 #37	ENSGT00940000155440.d
Rhesus	MODERN SPECIES	2	PRPH (ENSMMUG00000031976) #8	TUBA1C (ENSMMUG00000009788)	TUBA1A (ENSMMUG00000021081)	LMBR1L (ENSMMUG00000012769) #10	DHH (ENSMMUG00000012776) #11	RHEBL1 (ENSMMUG00000015721) #12	KMT2D (ENSMMUG00000015718) #13	PRKAG1 (ENSMMUG00000015713) #15	DDN (ENSMMUG00000058313) #16	WNT1 (ENSMMUG00000015709) #17	WNT10B (ENSMMUG00000015705) #18	ENSMMUG00000041595	ENSMMUG00000063745	CCDC65 (ENSMMUG00000006970) #21	ARF3 (ENSMMUG00000006971) #19	RND1 (ENSMMUG00000048864) #22	DDX23 (ENSMMUG00000008432) #23	CACNB3 (ENSMMUG00000008430) #24	ADCY6 (ENSMMUG00000006253) #25	TEX49 (ENSMMUG00000054025) #27	CCNT1 (ENSMMUG00000007629) #28	KANSL2 (ENSMMUG00000003877) #29	LALBA (ENSMMUG00000000283) #30	OR5BS1P (ENSMMUG00000059987)	OR8S1 (ENSMMUG00000000539)	ENSMMUG00000048875	ZNF641 (ENSMMUG00000014484) #33	H1-7 (ENSMMUG00000051724)	CCDC184 (ENSMMUG00000052412) #36	ASB8 (ENSMMUG00000002048) #37	PFKM (ENSMMUG00000002045)
Crab-eating macaque	MODERN SPECIES	2	TROAP (ENSMFAG00000021053) #7	PRPH (ENSMFAG00000050077) #8	ENSMFAG00000042144	TUBA1B (ENSMFAG00000035643)	DHH (ENSMFAG00000051486) #11	LMBR1L (ENSMFAG00000031019) #10	RHEBL1 (ENSMFAG00000035227) #12	ENSMFAG00000038689 #13	ENSMFAG00000052907 #13	PRKAG1 (ENSMFAG00000040023) #15	DDN (ENSMFAG00000025897) #16	WNT1 (ENSMFAG00000034644) #17	WNT10B (ENSMFAG00000043880) #18	ARF3 (ENSMFAG00000036847) #19	CCDC65 (ENSMFAG00000000659) #21	RND1 (ENSMFAG00000052114) #22	DDX23 (ENSMFAG00000038666) #23	CACNB3 (ENSMFAG00000041712) #24	ADCY6 (ENSMFAG00000039058) #25	TEX49 (ENSMFAG00000041881) #27	CCNT1 (ENSMFAG00000042457) #28	KANSL2 (ENSMFAG00000039042) #29	ENSMFAG00000050804	LALBA (ENSMFAG00000003340) #30	OR5BS1P (ENSMFAG00000060517)	OR8S1 (ENSMFAG00000043587)	ENSMFAG00000031362	ENSMFAG00000049420	ENSMFAG00000042792 #33	H1-7 (ENSMFAG00000053048)	CCDC184 (ENSMFAG00000058649) #36
Cercopithecinae_b	ANCESTRAL SPECIES	2	ENSGT00940000155969	ENSGT00390000012132.d #7	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b.e #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000159881.a.a.a	ENSGT00390000014843	ENSGT00390000003125.i.b	ENSGT00940000162121 #33	ENSGT00730000111596	ENSGT00390000002978 #36	ENSGT00940000159366 #37
Cercopithecinae_d	ANCESTRAL SPECIES	3	ENSGT00940000155969	ENSGT00390000012132.d #7	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b.e #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000159881.a.a.a	ENSGT00390000014843	ENSGT00390000003125.i.b	ENSGT00940000162121 #33	ENSGT00390000004856.w.a.a.b.a.a.b	ENSGT00940000157911.b.a	ENSGT00910000147030	ENSGT00390000002978 #36
Sooty mangabey	MODERN SPECIES	571	TROAP (ENSCATG00000043456) #7	PRPH (ENSCATG00000039831) #8	TUBA1C (ENSCATG00000031924)	TUBA1B (ENSCATG00000038328)	LMBR1L (ENSCATG00000012344) #10	DHH (ENSCATG00000041798) #11	RHEBL1 (ENSCATG00000037990) #12	KMT2D (ENSCATG00000038964) #13	PRKAG1 (ENSCATG00000035196) #15	DDN (ENSCATG00000041447) #16	WNT10B (ENSCATG00000042594) #18	WNT1 (ENSCATG00000029984) #17	ARF3 (ENSCATG00000033929) #19	CCDC65 (ENSCATG00000035262) #21	FKBP11 (ENSCATG00000030882) #20	RND1 (ENSCATG00000026420) #22	DDX23 (ENSCATG00000039797) #23	CACNB3 (ENSCATG00000036744) #24	ADCY6 (ENSCATG00000031664) #25	TEX49 (ENSCATG00000026325) #27	CCNT1 (ENSCATG00000012742) #28	KANSL2 (ENSCATG00000039151) #29	LALBA (ENSCATG00000035302) #30	OR8S1 (ENSCATG00000004425)	C12orf54 (ENSCATG00000034097)	ENSCATG00000041332	ZNF641 (ENSCATG00000043835) #33	ENSCATG00000021099	ENSCATG00000038030	ENSCATG00000032527	ASB8 (ENSCATG00000030950) #37
Drill	MODERN SPECIES	959	TUBA1C (ENSMLEG00000043554)	ENSMLEG00000031016	ENSMLEG00000026197	LMBR1L (ENSMLEG00000043801) #10	DHH (ENSMLEG00000029947) #11	RHEBL1 (ENSMLEG00000043169) #12	KMT2D (ENSMLEG00000027718) #13	PRKAG1 (ENSMLEG00000040639) #15	DDN (ENSMLEG00000042019) #16	WNT1 (ENSMLEG00000006250) #17	WNT10B (ENSMLEG00000023418) #18	ARF3 (ENSMLEG00000028270) #19	ENSMLEG00000018862	CCDC65 (ENSMLEG00000039143) #21	FKBP11 (ENSMLEG00000043157) #20	RND1 (ENSMLEG00000030008) #22	DDX23 (ENSMLEG00000042846) #23	CACNB3 (ENSMLEG00000021784) #24	ADCY6 (ENSMLEG00000043020) #25	TEX49 (ENSMLEG00000031575) #27	CCNT1 (ENSMLEG00000043751) #28	KANSL2 (ENSMLEG00000030435) #29	ENSMLEG00000033939 #30	OR8S1 (ENSMLEG00000043967)	C12orf54 (ENSMLEG00000013602)	ENSMLEG00000030489	ENSMLEG00000036523	ZNF641 (ENSMLEG00000044259) #33	ENSMLEG00000007600	ENSMLEG00000035066	ENSMLEG00000039549
Olive baboon	MODERN SPECIES	19	ENSPANG00000012632 #7	PRPH (ENSPANG00000014074) #8	ENSPANG00000038136	ENSPANG00000047303	LMBR1L (ENSPANG00000022414) #10	DHH (ENSPANG00000022683) #11	RHEBL1 (ENSPANG00000006545) #12	KMT2D (ENSPANG00000000833) #13	PRKAG1 (ENSPANG00000000832) #15	DDN (ENSPANG00000010116) #16	WNT1 (ENSPANG00000014119) #17	WNT10B (ENSPANG00000043026) #18	ARF3 (ENSPANG00000025346) #19	FKBP11 (ENSPANG00000007285) #20	CCDC65 (ENSPANG00000019461) #21	RND1 (ENSPANG00000039740) #22	DDX23 (ENSPANG00000019459) #23	CACNB3 (ENSPANG00000019458) #24	ADCY6 (ENSPANG00000021677) #25	TEX49 (ENSPANG00000016674) #27	CCNT1 (ENSPANG00000012633) #28	KANSL2 (ENSPANG00000019844) #29	LALBA (ENSPANG00000050965) #30	OR5BS1P (ENSPANG00000041563)	OR8S1 (ENSPANG00000006685)	C12orf54 (ENSPANG00000008134)	ENSPANG00000041823	ENSPANG00000041580	ZNF641 (ENSPANG00000014075) #33	H1-7 (ENSPANG00000045002)	CCDC184 (ENSPANG00000014422) #36
Platyrrhini	ANCESTRAL SPECIES	6	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.l.a	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00560000078683	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00390000014843	ENSGT00940000162202.A #32	ENSGT00730000111596	ENSGT00940000162121 #33	ENSGT00530000063539.b	ENSGT00940000158580	ENSGT00730000110905.b
Cebidae	ANCESTRAL SPECIES	2	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00560000078683	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00390000014843	ENSGT00940000162202.A #32	ENSGT00730000111596	ENSGT00940000162121 #33	ENSGT00940000158580	ENSGT00730000110905.b	ENSGT00940000153832.f
Cebidae_a	ANCESTRAL SPECIES	5	ENSGT00940000154457.a.a	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00560000078683	ENSGT00940000159521 #20	ENSGT00950000182960.a.a.a.a.b.rb.n.a.a	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00390000014843	ENSGT00940000162202.A #32	ENSGT00730000111596	ENSGT00940000162121 #33	ENSGT00940000158580	ENSGT00730000110905.b	ENSGT00940000153832.f	ENSGT00940000155811
Bolivian squirrel monkey	MODERN SPECIES	153	ENSSBOG00000028238	LMBR1L (ENSSBOG00000023418) #10	DHH (ENSSBOG00000036092) #11	RHEBL1 (ENSSBOG00000035130) #12	KMT2D (ENSSBOG00000035169) #13	PRKAG1 (ENSSBOG00000021677) #15	DDN (ENSSBOG00000021863) #16	WNT1 (ENSSBOG00000023811) #17	WNT10B (ENSSBOG00000016250) #18	ARF3 (ENSSBOG00000021606) #19	ENSSBOG00000018490	FKBP11 (ENSSBOG00000023963) #20	ENSSBOG00000034756	ENSSBOG00000029649	CCDC65 (ENSSBOG00000023064) #21	RND1 (ENSSBOG00000001346) #22	DDX23 (ENSSBOG00000025799) #23	CACNB3 (ENSSBOG00000002898) #24
Capuchin	MODERN SPECIES	181	ENSCCAG00000032130	ENSCCAG00000036239	LMBR1L (ENSCCAG00000034639) #10	DHH (ENSCCAG00000008770) #11	RHEBL1 (ENSCCAG00000021754) #12	KMT2D (ENSCCAG00000034677) #13	PRKAG1 (ENSCCAG00000017317) #15	DDN (ENSCCAG00000030806) #16	WNT1 (ENSCCAG00000031046) #17	WNT10B (ENSCCAG00000037600) #18	ENSCCAG00000033541	ARF3 (ENSCCAG00000037739) #19	FKBP11 (ENSCCAG00000032118) #20	ENSCCAG00000023694	CCDC65 (ENSCCAG00000036201) #21	RND1 (ENSCCAG00000034569) #22	DDX23 (ENSCCAG00000029177) #23	CACNB3 (ENSCCAG00000036470) #24	ADCY6 (ENSCCAG00000024076) #25	TEX49 (ENSCCAG00000032188) #27	CCNT1 (ENSCCAG00000023845) #28	KANSL2 (ENSCCAG00000020376) #29	LALBA (ENSCCAG00000025269) #30	C12orf54 (ENSCCAG00000037784)	ENSCCAG00000034809	ENSCCAG00000021143 #32	H1-7 (ENSCCAG00000014081)	ZNF641 (ENSCCAG00000036303) #33	ENSCCAG00000037642	ENSCCAG00000026653	CPM (ENSCCAG00000037814)
Marmoset	MODERN SPECIES	21	PRPH (ENSCJAG00000020904) #8	TUBA1C (ENSCJAG00000075171)	TUBA1A (ENSCJAG00000071730)	TUBA1B (ENSCJAG00000086136)	LMBR1L (ENSCJAG00000020863) #10	DHH (ENSCJAG00000020862) #11	RHEBL1 (ENSCJAG00000020856) #12	ENSCJAG00000058349 #13	ENSCJAG00000020827 #15	DDN (ENSCJAG00000048410) #16	WNT1 (ENSCJAG00000020813) #17	WNT10B (ENSCJAG00000020802) #18	ARF3 (ENSCJAG00000020800) #19	CCDC65 (ENSCJAG00000020792) #21	FKBP11 (ENSCJAG00000046812) #20	RND1 (ENSCJAG00000051836) #22	DDX23 (ENSCJAG00000020775) #23	CACNB3 (ENSCJAG00000020762) #24	ADCY6 (ENSCJAG00000020756) #25	TEX49 (ENSCJAG00000041983) #27	CCNT1 (ENSCJAG00000020739) #28	KANSL2 (ENSCJAG00000020735) #29	LALBA (ENSCJAG00000020732) #30	OR5BS1P (ENSCJAG00000060436)	C12orf54 (ENSCJAG00000020725)	ZNF641 (ENSCJAG00000082757) #33	ENSCJAG00000070721	ENSCJAG00000074436	CPM (ENSCJAG00000001828)	CPSF6 (ENSCJAG00000001798)	LYZ (ENSCJAG00000001779)
Mas night monkey	MODERN SPECIES	1029	ENSANAG00000028464	LMBR1L (ENSANAG00000038013) #10	DHH (ENSANAG00000023041) #11	RHEBL1 (ENSANAG00000025035) #12	KMT2D (ENSANAG00000024519) #13	PRKAG1 (ENSANAG00000029035) #15	DDN (ENSANAG00000027078) #16	WNT1 (ENSANAG00000026167) #17	WNT10B (ENSANAG00000031838) #18	ENSANAG00000020636	ARF3 (ENSANAG00000025111) #19	ENSANAG00000030850	FKBP11 (ENSANAG00000032791) #20	ENSANAG00000036811	CCDC65 (ENSANAG00000025259) #21	RND1 (ENSANAG00000032196) #22	DDX23 (ENSANAG00000018663) #23	CACNB3 (ENSANAG00000023621) #24	ADCY6 (ENSANAG00000030000) #25	TEX49 (ENSANAG00000024703) #27	CCNT1 (ENSANAG00000019549) #28	KANSL2 (ENSANAG00000029846) #29	LALBA (ENSANAG00000027355) #30	C12orf54 (ENSANAG00000035791)	ZNF641 (ENSANAG00000036405) #33	ENSANAG00000038209	CPM (ENSANAG00000038366)	CPSF6 (ENSANAG00000019240)	LYZ (ENSANAG00000019339)	YEATS4 (ENSANAG00000032795)	ENSANAG00000033517
Tarsier	MODERN SPECIES	6705				TUBA1A (ENSTSYG00000031483)	TUBA1B (ENSTSYG00000013266)	LMBR1L (ENSTSYG00000009959) #10	DHH (ENSTSYG00000030517) #11	RHEBL1 (ENSTSYG00000036357) #12	KMT2D (ENSTSYG00000001131) #13	PRKAG1 (ENSTSYG00000013458) #15	WNT1 (ENSTSYG00000037339) #17	WNT10B (ENSTSYG00000035601) #18	ARF3 (ENSTSYG00000011564) #19	FKBP11 (ENSTSYG00000007691) #20	CCDC65 (ENSTSYG00000007635) #21	RND1 (ENSTSYG00000027407) #22	DDX23 (ENSTSYG00000005429) #23	CACNB3 (ENSTSYG00000005384) #24	ADCY6 (ENSTSYG00000014642) #25	TEX49 (ENSTSYG00000034408) #27	CCNT1 (ENSTSYG00000025426) #28	KANSL2 (ENSTSYG00000009751) #29	LALBA (ENSTSYG00000007307) #30
Strepsirrhini	ANCESTRAL SPECIES	3	ENSGT00940000160203 #8	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000159881.a.a.a	ENSGT00390000014843	ENSGT00940000162202.B ##32	ENSGT00940000162121 #33	ENSGT00730000111596	ENSGT01100000263574.a	ENSGT00390000002978 #36
Lemuriformes	ANCESTRAL SPECIES	1	ENSGT00940000160203 #8	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000159881.a.a.a	ENSGT00390000014843	ENSGT00940000162202.B ##32	ENSGT00940000162121 #33	ENSGT00730000111596	ENSGT01100000263574.a	ENSGT00390000002978 #36
Mouse lemur	MODERN SPECIES	29	PRPH (ENSMICG00000016388) #8	ENSMICG00000036184	TUBA1A (ENSMICG00000031961)	TUBA1B (ENSMICG00000046786)	LMBR1L (ENSMICG00000017550) #10	DHH (ENSMICG00000017549) #11	RHEBL1 (ENSMICG00000017548) #12	KMT2D (ENSMICG00000017547) #13	PRKAG1 (ENSMICG00000035239) #15	DDN (ENSMICG00000032556) #16	WNT1 (ENSMICG00000045219) #17	WNT10B (ENSMICG00000011017) #18	ARF3 (ENSMICG00000043617) #19	CCDC65 (ENSMICG00000029612) #21	FKBP11 (ENSMICG00000017545) #20	RND1 (ENSMICG00000034995) #22	DDX23 (ENSMICG00000017541) #23	CACNB3 (ENSMICG00000017540) #24	ADCY6 (ENSMICG00000011825) #25	TEX49 (ENSMICG00000046126) #27	CCNT1 (ENSMICG00000045745) #28	KANSL2 (ENSMICG00000005369) #29	LALBA (ENSMICG00000027875) #30	C12orf54 (ENSMICG00000044033)	ZNF641 (ENSMICG00000007360) #33	ENSMICG00000043548	ASB8 (ENSMICG00000036562) #37	ENSMICG00000009077	SENP1 (ENSMICG00000009067)	COL2A1 (ENSMICG00000009035)	TMEM106C (ENSMICG00000001808)
Lemuriformes_a	ANCESTRAL SPECIES	8	ENSGT00390000012132 #7	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000159881.a.a.a	ENSGT00390000014843	ENSGT00940000162202.B ##32	ENSGT00940000162121 #33	ENSGT00730000111596	ENSGT01100000263574.a	ENSGT00390000002978 #36
Greater bamboo lemur	MODERN SPECIES	157					LMBR1L (ENSPSMG00000005135) #10	DHH (ENSPSMG00000005234) #11	RHEBL1 (ENSPSMG00000005241) #12	KMT2D (ENSPSMG00000005275) #13	PRKAG1 (ENSPSMG00000005361) #15	DDN (ENSPSMG00000005533) #16	WNT1 (ENSPSMG00000005535) #17	WNT10B (ENSPSMG00000005540) #18	ARF3 (ENSPSMG00000005561) #19	FKBP11 (ENSPSMG00000005580) #20	CCDC65 (ENSPSMG00000005598) #21	RND1 (ENSPSMG00000005611) #22	DDX23 (ENSPSMG00000005631) #23	CACNB3 (ENSPSMG00000005832) #24	ADCY6 (ENSPSMG00000006198) #25	TEX49 (ENSPSMG00000006230) #27	CCNT1 (ENSPSMG00000006248) #28	KANSL2 (ENSPSMG00000006262) #29	LALBA (ENSPSMG00000006288) #30	OR5BS1P (ENSPSMG00000006293)	OR8S1 (ENSPSMG00000006307)	C12orf54 (ENSPSMG00000006313)	ENSPSMG00000006325 ##32	ZNF641 (ENSPSMG00000006343) #33	ENSPSMG00000006354	OR10AD1 (ENSPSMG00000006355)	CCDC184 (ENSPSMG00000006359) #36
Coquerels sifaka	MODERN SPECIES	91	TROAP (ENSPCOG00000020936) #7	PRPH (ENSPCOG00000024415) #8	TUBA1C (ENSPCOG00000023706)	TUBA1A (ENSPCOG00000014540)	LMBR1L (ENSPCOG00000021876) #10	DHH (ENSPCOG00000000341) #11	RHEBL1 (ENSPCOG00000025412) #12	KMT2D (ENSPCOG00000023172) #13	PRKAG1 (ENSPCOG00000014137) #15	DDN (ENSPCOG00000027752) #16	WNT1 (ENSPCOG00000015303) #17	WNT10B (ENSPCOG00000005304) #18	ARF3 (ENSPCOG00000001914) #19	FKBP11 (ENSPCOG00000017728) #20	ENSPCOG00000019265 #21	RND1 (ENSPCOG00000021549) #22	DDX23 (ENSPCOG00000025915) #23	CACNB3 (ENSPCOG00000027005) #24	ADCY6 (ENSPCOG00000007340) #25	TEX49 (ENSPCOG00000019022) #27	CCNT1 (ENSPCOG00000024849) #28	KANSL2 (ENSPCOG00000024808) #29
Bushbaby	MODERN SPECIES	185	TROAP (ENSOGAG00000009440) #7	PRPH (ENSOGAG00000009430) #8	ENSOGAG00000032046	TUBA1B (ENSOGAG00000009435)	LMBR1L (ENSOGAG00000005451) #10	DHH (ENSOGAG00000034671) #11	ENSOGAG00000013477 #12	KMT2D (ENSOGAG00000013443) #13	ENSOGAG00000013439 #15	DDN (ENSOGAG00000013435) #16	WNT1 (ENSOGAG00000028669) #17	WNT10B (ENSOGAG00000016922) #18	ENSOGAG00000012858 #19	FKBP11 (ENSOGAG00000006494) #20	CCDC65 (ENSOGAG00000006488) #21	RND1 (ENSOGAG00000034246) #22	DDX23 (ENSOGAG00000016813) #23	CACNB3 (ENSOGAG00000028602) #24	ADCY6 (ENSOGAG00000016801) #25	CCNT1 (ENSOGAG00000016794) #28	KANSL2 (ENSOGAG00000033595) #29	LALBA (ENSOGAG00000028012) #30	OR8S1 (ENSOGAG00000005676)	C12orf54 (ENSOGAG00000005674)	ENSOGAG00000034537 ##32	ZNF641 (ENSOGAG00000005519) #33	H1-7 (ENSOGAG00000008945)	OR10AD1 (ENSOGAG00000005517)	CCDC184 (ENSOGAG00000030121) #36	ASB8 (ENSOGAG00000005509) #37	PFKM (ENSOGAG00000005501)
Laurasiatheria	ANCESTRAL SPECIES	6	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00560000078683	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000159881.a.b.b	ENSGT00940000159881.a.b.a	ENSGT00940000163941.A	ENSGT00940000162202.C ##32	ENSGT00940000159881.a.a.a
Eulipotyphla	ANCESTRAL SPECIES	158														ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24
Common shrew	MODERN SPECIES	4846															ENSSARG00000004603 #21	RND1 (ENSSARG00000004593) #22	DDX23 (ENSSARG00000004534) #23	CACNB3 (ENSSARG00000004502) #24
Hedgehog	MODERN SPECIES	10653																RND1 (ENSEEUG00000015869) #22
Laurasiatheria_a	ANCESTRAL SPECIES	6	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00560000078683	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000159881.a.a.b	ENSGT00940000159881.a.b.b	ENSGT00940000159881.a.b.a	ENSGT00940000163941.A	ENSGT00940000162202.C ##32
Artiodactyla	ANCESTRAL SPECIES	6	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00560000078683	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.C.a	ENSGT00940000162388.C.b	ENSGT00940000162388.A	ENSGT00940000159881.a.a.b	ENSGT00940000159881.a.b.b	ENSGT00940000159881.a.b.a
Suina	ANCESTRAL SPECIES	21	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00560000078683	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000167128	ENSGT00940000157255	ENSGT00390000015968	ENSGT00940000157835	ENSGT00950000183132.A	ENSGT01050000244879.b.a.b.a	ENSGT00390000014700.a	ENSGT00390000013899.a.a	ENSGT00530000063817.b	ENSGT00940000155455 #34
Chacoan peccary	MODERN SPECIES	899	DNAJC22 (ENSCWAG00000018638)	C1QL4 (ENSCWAG00000018661)	TROAP (ENSCWAG00000018696) #7	PRPH (ENSCWAG00000018787) #8	TUBA1C (ENSCWAG00000018842)	LMBR1L (ENSCWAG00000019023) #10	DHH (ENSCWAG00000019060) #11	RHEBL1 (ENSCWAG00000019080) #12	PRKAG1 (ENSCWAG00000019683) #15	DDN (ENSCWAG00000019760) #16	WNT1 (ENSCWAG00000019782) #17	WNT10B (ENSCWAG00000019813) #18	ARF3 (ENSCWAG00000019853) #19	FKBP11 (ENSCWAG00000019881) #20	CCDC65 (ENSCWAG00000019906) #21	RND1 (ENSCWAG00000019925) #22	DDX23 (ENSCWAG00000019941) #23	CACNB3 (ENSCWAG00000020007) #24	ADCY6 (ENSCWAG00000020127) #25	TEX49 (ENSCWAG00000020170) #27	CCNT1 (ENSCWAG00000020191) #28	ENSCWAG00000020216	NUAK1 (ENSCWAG00000020234)	CKAP4 (ENSCWAG00000020245)	TCP11L2 (ENSCWAG00000020258)	POLR3B (ENSCWAG00000020275)	RFX4 (ENSCWAG00000020335)	RIC8B (ENSCWAG00000020465)	TMEM263 (ENSCWAG00000020539)	MTERF2 (ENSCWAG00000020546)	CRY1 (ENSCWAG00000020554) #34
Pig	MODERN SPECIES	13	ENSSSCG00000000194	TUBA1B (ENSSSCG00000000190)	LMBR1L (ENSSSCG00000000189) #10	DHH (ENSSSCG00000000188) #11	RHEBL1 (ENSSSCG00000000186) #12	ENSSSCG00000042640 #13	ENSSSCG00000035856 #13	PRKAG1 (ENSSSCG00000000185) #15	DDN (ENSSSCG00000000184) #16	WNT1 (ENSSSCG00000000183) #17	WNT10B (ENSSSCG00000000182) #18	ARF3 (ENSSSCG00000051954) #19	ENSSSCG00000032202	FKBP11 (ENSSSCG00000059895) #20	CCDC65 (ENSSSCG00000000179) #21	RND1 (ENSSSCG00000038562) #22	DDX23 (ENSSSCG00000000176) #23	CACNB3 (ENSSSCG00000032967) #24	ADCY6 (ENSSSCG00000000175) #25	TEX49 (ENSSSCG00000000174) #27	CCNT1 (ENSSSCG00000038181) #28	C12orf75 (ENSSSCG00000031661)	NUAK1 (ENSSSCG00000032861)	CKAP4 (ENSSSCG00000000171)	TCP11L2 (ENSSSCG00000024881)	POLR3B (ENSSSCG00000057209)	RFX4 (ENSSSCG00000052141)	RIC8B (ENSSSCG00000000167)	TMEM263 (ENSSSCG00000038968)	MTERF2 (ENSSSCG00000039109)	CRY1 (ENSSSCG00000000164) #34
Artiodactyla_a	ANCESTRAL SPECIES	5	ENSGT00940000160203 #8	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.C.a	ENSGT00940000162388.C.b	ENSGT00940000162388.A	ENSGT00940000159881.a.a.b	ENSGT00940000159881.a.b.b	ENSGT00940000159881.a.a.a
Camelidae	ANCESTRAL SPECIES	27	ENSGT00950000182825.A.a.b.a.b.a.a.b	ENSGT00940000154457.a.a.d	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.C.b	ENSGT00940000159881.a.a.b	ENSGT00940000159881.a.a.a	ENSGT00980000199472	ENSGT00390000014843	ENSGT00940000162202.B ##32
Arabian camel	MODERN SPECIES	3	ENSCDRG00005006108	PRPH (ENSCDRG00005006126) #8	ENSCDRG00005006150	ENSCDRG00005006163	LMBR1L (ENSCDRG00005006301) #10	DHH (ENSCDRG00005006364) #11	RHEBL1 (ENSCDRG00005006397) #12	KMT2D (ENSCDRG00005006455) #13	PRKAG1 (ENSCDRG00005006815) #15	DDN (ENSCDRG00005007430) #16	WNT1 (ENSCDRG00005007459) #17	WNT10B (ENSCDRG00005007497) #18	ARF3 (ENSCDRG00005007669) #19	FKBP11 (ENSCDRG00005007776) #20	CCDC65 (ENSCDRG00005007938) #21	RND1 (ENSCDRG00005007992) #22	DDX23 (ENSCDRG00005008033) #23	CACNB3 (ENSCDRG00005008229) #24	ADCY6 (ENSCDRG00005008996) #25	TEX49 (ENSCDRG00005009197) #27	CCNT1 (ENSCDRG00005009254) #28	KANSL2 (ENSCDRG00005009454) #29	LALBA (ENSCDRG00005009690) #30	OR5BS1P (ENSCDRG00005009797)	ENSCDRG00005009851	ENSCDRG00005009869	ENSCDRG00005009891	OR8S1 (ENSCDRG00005009912)	ENSCDRG00005009926	C12orf54 (ENSCDRG00005009973)	ENSCDRG00005010054 ##32
Artiodactyla_b	ANCESTRAL SPECIES	5	ENSGT00940000160203 #8	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.C.a	ENSGT00940000162388.C.b	ENSGT00940000162388.A	ENSGT00940000159881.a.a.b	ENSGT00940000159881.a.b.b	ENSGT00940000159881.a.a.a
Cetacea	ANCESTRAL SPECIES	8	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.bc.b	ENSGT00940000154457.a.a.c.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.cc	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00390000014843	ENSGT00940000162202.A #32	ENSGT00940000162202.B ##32	ENSGT00940000165904.b	ENSGT00940000162121 #33	ENSGT00730000111596	ENSGT00390000002978 #36	ENSGT00940000159366 #37
Odontoceti	ANCESTRAL SPECIES	7	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.bc.b	ENSGT00940000154457.a.a.c.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.cc	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000162202.A #32	ENSGT00940000162202.B ##32	ENSGT00940000162121 #33	ENSGT00730000111596	ENSGT00390000002978 #36	ENSGT00940000159366 #37	ENSGT00940000155440.d	ENSGT00940000155489.b.f
Odontoceti_a	ANCESTRAL SPECIES	6	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.bc.b	ENSGT00940000154457.a.a.c.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.cc	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000162202.A #32	ENSGT00940000162202.B ##32	ENSGT00940000162121 #33	ENSGT00730000111596	ENSGT00390000002978 #36	ENSGT00940000159366 #37	ENSGT00940000155440.d	ENSGT00940000155489.b.f
Odontoceti_b	ANCESTRAL SPECIES	7	ENSGT00940000160203 #8	ENSGT00940000154457.a.a.c.a	ENSGT00900000143450	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.cc	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000162202.A #32	ENSGT00940000162202.B ##32	ENSGT00940000162121 #33	ENSGT00730000111596	ENSGT00390000002978 #36	ENSGT00940000159366 #37	ENSGT00940000155440.d	ENSGT00940000155489.b.f
Monodontidae	ANCESTRAL SPECIES	6	ENSGT01010000229521	ENSGT00940000154457.a.a.c.a	ENSGT00900000143450	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.cc	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000162202.A #32	ENSGT00940000162202.B ##32	ENSGT00940000162121 #33	ENSGT00730000111596	ENSGT00390000002978 #36	ENSGT00940000159366 #37	ENSGT00940000155440.d	ENSGT00940000155489.b.f
Narwhal	MODERN SPECIES	313	ENSMMNG00015021728	ENSMMNG00015021713	ENSMMNG00015021709	TUBA1B (ENSMMNG00015021671)	LMBR1L (ENSMMNG00015021626) #10	DHH (ENSMMNG00015021606) #11	RHEBL1 (ENSMMNG00015021596) #12	KMT2D (ENSMMNG00015021547) #13	PRKAG1 (ENSMMNG00015021509) #15	DDN (ENSMMNG00015021490) #16	WNT1 (ENSMMNG00015021481) #17	WNT10B (ENSMMNG00015021457) #18	ARF3 (ENSMMNG00015021435) #19	FKBP11 (ENSMMNG00015021421) #20	CCDC65 (ENSMMNG00015021403) #21	RND1 (ENSMMNG00015021382) #22	DDX23 (ENSMMNG00015021351) #23	CACNB3 (ENSMMNG00015021282) #24	ADCY6 (ENSMMNG00015021235) #25	TEX49 (ENSMMNG00015021216) #27	CCNT1 (ENSMMNG00015021207) #28	KANSL2 (ENSMMNG00015021172) #29	LALBA (ENSMMNG00015021155) #30	ENSMMNG00015021133 #32	ENSMMNG00015021120 ##32	ZNF641 (ENSMMNG00015021069) #33	ENSMMNG00015021040	CCDC184 (ENSMMNG00015021019) #36	ASB8 (ENSMMNG00015020972) #37	PFKM (ENSMMNG00015020844)	SENP1 (ENSMMNG00015020735)
Beluga whale	MODERN SPECIES	39	ENSDLEG00000005507	ENSDLEG00000005525	ENSDLEG00000005535	ENSDLEG00000005539	LMBR1L (ENSDLEG00000005547) #10	DHH (ENSDLEG00000005560) #11	RHEBL1 (ENSDLEG00000005603) #12	ENSDLEG00000005622 #13	PRKAG1 (ENSDLEG00000005643) #15	DDN (ENSDLEG00000005658) #16	WNT1 (ENSDLEG00000005671) #17	WNT10B (ENSDLEG00000005685) #18	ARF3 (ENSDLEG00000005695) #19	FKBP11 (ENSDLEG00000005706) #20	CCDC65 (ENSDLEG00000005725) #21	RND1 (ENSDLEG00000005740) #22	DDX23 (ENSDLEG00000005750) #23	CACNB3 (ENSDLEG00000005763) #24	ADCY6 (ENSDLEG00000005780) #25	TEX49 (ENSDLEG00000005785) #27	CCNT1 (ENSDLEG00000005789) #28	KANSL2 (ENSDLEG00000005802) #29	LALBA (ENSDLEG00000005853) #30	ENSDLEG00000005857 #32	ENSDLEG00000005879 ##32	ZNF641 (ENSDLEG00000005908) #33	ENSDLEG00000005917	CCDC184 (ENSDLEG00000005920) #36	ASB8 (ENSDLEG00000005926) #37	PFKM (ENSDLEG00000005929)	SENP1 (ENSDLEG00000005948)
Vaquita	MODERN SPECIES	1	PRPH (ENSPSNG00000010814) #8	ENSPSNG00000010933	TUBA1A (ENSPSNG00000010994)	KLHL8 (ENSPSNG00000011123)	TUBA1B (ENSPSNG00000011161)	LMBR1L (ENSPSNG00000011226) #10	DHH (ENSPSNG00000011320) #11	RHEBL1 (ENSPSNG00000011379) #12	KMT2D (ENSPSNG00000011440) #13	ENSPSNG00000011515 #15	DDN (ENSPSNG00000011626) #16	WNT10B (ENSPSNG00000011881) #18	ARF3 (ENSPSNG00000011993) #19	FKBP11 (ENSPSNG00000012091) #20	CCDC65 (ENSPSNG00000012176) #21	RND1 (ENSPSNG00000012213) #22	DDX23 (ENSPSNG00000012273) #23	CACNB3 (ENSPSNG00000012498) #24	ADCY6 (ENSPSNG00000012820) #25	TEX49 (ENSPSNG00000012970) #27	CCNT1 (ENSPSNG00000013040) #28	KANSL2 (ENSPSNG00000013130) #29	LALBA (ENSPSNG00000013222) #30	ENSPSNG00000013321 #32	ENSPSNG00000013345 ##32	ZNF641 (ENSPSNG00000013419) #33	ENSPSNG00000013590	CCDC184 (ENSPSNG00000013611) #36	ASB8 (ENSPSNG00000013660) #37	PFKM (ENSPSNG00000013971)	SENP1 (ENSPSNG00000014150)
Dolphin	MODERN SPECIES	2013					TUBA1B (ENSTTRG00000004794)	LMBR1L (ENSTTRG00000004787) #10	DHH (ENSTTRG00000004783) #11	RHEBL1 (ENSTTRG00000004778) #12	KMT2D (ENSTTRG00000004737) #13	PRKAG1 (ENSTTRG00000004730) #15	WNT1 (ENSTTRG00000004715) #17	WNT10B (ENSTTRG00000004707) #18	ARF3 (ENSTTRG00000004698) #19	FKBP11 (ENSTTRG00000004690) #20	CCDC65 (ENSTTRG00000004671) #21	RND1 (ENSTTRG00000004652) #22	DDX23 (ENSTTRG00000004604) #23
Sperm whale	MODERN SPECIES	17	KCNH3 (ENSPCTG00005008212)	SPATS2 (ENSPCTG00005008268)	ENSPCTG00005008318	C1QL4 (ENSPCTG00005008336)	TROAP (ENSPCTG00005008366) #7	TUBA1B (ENSPCTG00005008408)	ENSPCTG00005008557	ENSPCTG00005008583	LMBR1L (ENSPCTG00005008612) #10	DHH (ENSPCTG00005008692) #11	RHEBL1 (ENSPCTG00005008730) #12	ENSPCTG00005008759 #13	ENSPCTG00005008813 #13	PRKAG1 (ENSPCTG00005008847) #15	DDN (ENSPCTG00005009026) #16	RND1 (ENSPCTG00005009054) #22	DDX23 (ENSPCTG00005009112) #23	CACNB3 (ENSPCTG00005009465) #24	ADCY6 (ENSPCTG00005009811) #25	TEX49 (ENSPCTG00005009964) #27	CCNT1 (ENSPCTG00005010029) #28	KANSL2 (ENSPCTG00005010081) #29	LALBA (ENSPCTG00005010137) #30	OR10AD1 (ENSPCTG00005010253)	ZNF641 (ENSPCTG00005010300) #33	H1-7 (ENSPCTG00005010454)	CCDC184 (ENSPCTG00005010471) #36	ASB8 (ENSPCTG00005010504) #37	PFKM (ENSPCTG00005010671)	SENP1 (ENSPCTG00005011241)	COL2A1 (ENSPCTG00005011414)
Blue whale	MODERN SPECIES	1	TUBA1C (ENSBMSG00010017602)	ENSBMSG00010017570	ENSBMSG00010017482	LMBR1L (ENSBMSG00010017366) #10	DHH (ENSBMSG00010017307) #11	RHEBL1 (ENSBMSG00010017253) #12	ENSBMSG00010017213 #13	ENSBMSG00010017183 #13	ENSBMSG00010017118 #15	DDN (ENSBMSG00010017081) #16	WNT1 (ENSBMSG00010017037) #17	WNT10B (ENSBMSG00010016972) #18	ARF3 (ENSBMSG00010016925) #19	FKBP11 (ENSBMSG00010016883) #20	CCDC65 (ENSBMSG00010016833) #21	RND1 (ENSBMSG00010016812) #22	DDX23 (ENSBMSG00010016731) #23	CACNB3 (ENSBMSG00010015985) #24	ADCY6 (ENSBMSG00010015810) #25	TEX49 (ENSBMSG00010015728) #27	CCNT1 (ENSBMSG00010015691) #28	KANSL2 (ENSBMSG00010015639) #29	LALBA (ENSBMSG00010015595) #30	C12orf54 (ENSBMSG00010015534)	ENSBMSG00010015505 #32	ENSBMSG00010015482 ##32	ENSBMSG00010015450 ##32	ENSBMSG00010015426	ZNF641 (ENSBMSG00010015344) #33	H1-7 (ENSBMSG00010015314)	CCDC184 (ENSBMSG00010015284) #36
Pecora	ANCESTRAL SPECIES	3	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00960000190898	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000163803.i	ENSGT00940000162388.B	ENSGT00940000162388.C.a	ENSGT00940000162388.C.b	ENSGT00940000162388.A	ENSGT00940000159881.a.a.b	ENSGT00940000159881.a.b.b	ENSGT00940000159881.a.a.a
Yarkand deer	MODERN SPECIES	22	TROAP (ENSCHYG00000003840) #7	PRPH (ENSCHYG00000003901) #8	TUBA1B (ENSCHYG00000003929)	ENSCHYG00000003953	LMBR1L (ENSCHYG00000003957) #10	DHH (ENSCHYG00000005055) #11	RHEBL1 (ENSCHYG00000005073) #12	KMT2D (ENSCHYG00000005198) #13	PRKAG1 (ENSCHYG00000005803) #15	DDN (ENSCHYG00000006028) #16	WNT1 (ENSCHYG00000006049) #17	WNT10B (ENSCHYG00000006086) #18	ENSCHYG00000006160 #19	ENSCHYG00000006248	CCDC65 (ENSCHYG00000006275) #21	RND1 (ENSCHYG00000006305) #22	ENSCHYG00000006333 #23	CACNB3 (ENSCHYG00000006420) #24	ADCY6 (ENSCHYG00000006802) #25	TEX49 (ENSCHYG00000007024) #27	CCNT1 (ENSCHYG00000007058) #28	KANSL2 (ENSCHYG00000007154) #29	LALBA (ENSCHYG00000007267) #30	OR5BS1P (ENSCHYG00000007297)	ENSCHYG00000007310	ENSCHYG00000007316	ENSCHYG00000007334	ENSCHYG00000007345	ENSCHYG00000007357	ENSCHYG00000007368	OR8S1 (ENSCHYG00000007382)
Percora_a	ANCESTRAL SPECIES	3	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00960000190898	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000163803.i	ENSGT00940000162388.B	ENSGT00940000162388.C.a	ENSGT00940000162388.C.b	ENSGT00940000162388.A	ENSGT00940000159881.a.a.b	ENSGT00940000159881.a.b.b	ENSGT00940000159881.a.a.a
Siberian musk deer	MODERN SPECIES	320	ENSMMSG00000012233	ENSMMSG00000012225	ENSMMSG00000012207	ENSMMSG00000012192	LMBR1L (ENSMMSG00000012091) #10	DHH (ENSMMSG00000012067) #11	RHEBL1 (ENSMMSG00000012021) #12	KMT2D (ENSMMSG00000011813) #13	PRKAG1 (ENSMMSG00000011683) #15	DDN (ENSMMSG00000011655) #16	WNT1 (ENSMMSG00000011621) #17	WNT10B (ENSMMSG00000011539) #18	ARF3 (ENSMMSG00000011483) #19	FKBP11 (ENSMMSG00000011435) #20	CCDC65 (ENSMMSG00000011417) #21	RND1 (ENSMMSG00000011388) #22	DDX23 (ENSMMSG00000011285) #23	CACNB3 (ENSMMSG00000011142) #24	ADCY6 (ENSMMSG00000010871) #25	TEX49 (ENSMMSG00000010808) #27	CCNT1 (ENSMMSG00000010725) #28	KANSL2 (ENSMMSG00000010604) #29	LALBA (ENSMMSG00000010555) #30	ENSMMSG00000010541	ENSMMSG00000010527	ENSMMSG00000010508	ENSMMSG00000010488	ENSMMSG00000010450	ENSMMSG00000010441	C12orf54 (ENSMMSG00000010410)	ENSMMSG00000010379
Bovidae	ANCESTRAL SPECIES	3	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00960000190898	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000163803.j	ENSGT00940000163803.i	ENSGT00940000162388.B	ENSGT00940000162388.C.a	ENSGT00940000162388.C.b	ENSGT00940000162388.A	ENSGT00940000159881.a.a.b	ENSGT00940000159881.a.b.b
Caprinae	ANCESTRAL SPECIES		ENSGT00940000160203 #8	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000163803.j	ENSGT00940000163803.i	ENSGT00940000162388.B	ENSGT00940000162388.C.a	ENSGT00940000159881.a.a.b	ENSGT00940000159881.a.b.b	ENSGT00940000159881.a.a.a	ENSGT00390000014843
Rambouillet Sheep	MODERN SPECIES	19	ENSOARG00020000929	TUBA1C (ENSOARG00020000944)	TUBA1A (ENSOARG00020000988)	ENSOARG00020001038	LMBR1L (ENSOARG00020001056) #10	DHH (ENSOARG00020001078) #11	RHEBL1 (ENSOARG00020001088) #12	KMT2D (ENSOARG00020001142) #13	PRKAG1 (ENSOARG00020001353) #15	DDN (ENSOARG00020001388) #16	WNT1 (ENSOARG00020001399) #17	WNT10B (ENSOARG00020001413) #18	ARF3 (ENSOARG00020001435) #19	FKBP11 (ENSOARG00020001464) #20	CCDC65 (ENSOARG00020001481) #21	RND1 (ENSOARG00020001495) #22	DDX23 (ENSOARG00020001513) #23	CACNB3 (ENSOARG00020001592) #24	ADCY6 (ENSOARG00020001829) #25	TEX49 (ENSOARG00020001874) #27	CCNT1 (ENSOARG00020001901) #28	KANSL2 (ENSOARG00020001947) #29	LALBA (ENSOARG00020001995) #30	ENSOARG00020002005	ENSOARG00020002016	ENSOARG00020002030	ENSOARG00020002038	ENSOARG00020002069	ENSOARG00020002087	OR8S1 (ENSOARG00020002101)	ENSOARG00020002107
Goat	MODERN SPECIES	24	ENSCHIG00000019237	ENSCHIG00000025067	TUBA1A (ENSCHIG00000022988)	TUBA1B (ENSCHIG00000018025)	LMBR1L (ENSCHIG00000015579) #10	DHH (ENSCHIG00000009754) #11	RHEBL1 (ENSCHIG00000016686) #12	KMT2D (ENSCHIG00000015068) #13	PRKAG1 (ENSCHIG00000020571) #15	DDN (ENSCHIG00000009245) #16	WNT1 (ENSCHIG00000018993) #17	WNT10B (ENSCHIG00000010919) #18	ARF3 (ENSCHIG00000019252) #19	FKBP11 (ENSCHIG00000015331) #20	CCDC65 (ENSCHIG00000009627) #21	RND1 (ENSCHIG00000026053) #22	DDX23 (ENSCHIG00000018783) #23	CACNB3 (ENSCHIG00000012486) #24	ADCY6 (ENSCHIG00000011753) #25	TEX49 (ENSCHIG00000013799) #27	CCNT1 (ENSCHIG00000024236) #28	KANSL2 (ENSCHIG00000026147) #29	LALBA (ENSCHIG00000021449) #30	ENSCHIG00000011758	ENSCHIG00000022566	C12orf54 (ENSCHIG00000026745)	ENSCHIG00000011654 #32	ENSCHIG00000009579 ##32	ZNF641 (ENSCHIG00000023090) #33	ENSCHIG00000009244	ENSCHIG00000009773
Bovinae	ANCESTRAL SPECIES	17	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.dc.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00960000190898	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.ec	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000163803.i.b.a.a	ENSGT00940000162388.B	ENSGT00940000162388.C.a	ENSGT00940000162388.C.b	ENSGT00940000162388.A	ENSGT00940000159881.a.a.b	ENSGT00940000159881.a.b.b	ENSGT00940000159881.a.a.a
Bos	ANCESTRAL SPECIES	2	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.dc.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00960000190898	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.ec	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000163803.i.b.a.a	ENSGT00970000197187	ENSGT00940000162388.B	ENSGT00940000162388.C.a	ENSGT00940000162388.C.b	ENSGT00940000162388.A.a	ENSGT00940000159881.a.a.b	ENSGT00940000159881.a.b.b
Bos_a	ANCESTRAL SPECIES	3	ENSGT00950000182825.A.a.b.a.b.a.b.a.a.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.ec	ENSGT00960000190898	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000163803.i.b.a.a	ENSGT00970000197187	ENSGT00940000162388.B	ENSGT00940000162388.C.a	ENSGT00940000162388.C.b	ENSGT00940000162388.A.a	ENSGT00940000159881.a.a.b	ENSGT00940000159881.a.b.b
Wild yak	MODERN SPECIES	811	ENSBMUG00000023293	ENSBMUG00000023265	ENSBMUG00000023231	TUBA1A (ENSBMUG00000023218)	LMBR1L (ENSBMUG00000023203) #10	DHH (ENSBMUG00000023184) #11	RHEBL1 (ENSBMUG00000023169) #12	KMT2D (ENSBMUG00000023143) #13	PRKAG1 (ENSBMUG00000023104) #15	DDN (ENSBMUG00000023077) #16	WNT1 (ENSBMUG00000023065) #17	WNT10B (ENSBMUG00000023052) #18	ARF3 (ENSBMUG00000023035) #19	FKBP11 (ENSBMUG00000023022) #20	CCDC65 (ENSBMUG00000022996) #21	RND1 (ENSBMUG00000022988) #22	DDX23 (ENSBMUG00000022978) #23	CACNB3 (ENSBMUG00000022951) #24	ADCY6 (ENSBMUG00000022919) #25	TEX49 (ENSBMUG00000022878) #27	CCNT1 (ENSBMUG00000022863) #28	KANSL2 (ENSBMUG00000022822) #29	LALBA (ENSBMUG00000022803) #30	ENSBMUG00000022798	ENSBMUG00000022792	ENSBMUG00000022786	ENSBMUG00000022781
Domestic yak	MODERN SPECIES	24	TUBA1C (ENSBGRG00000001528)	ENSBGRG00000001514	ENSBGRG00000001508	TUBA1B (ENSBGRG00000001452)	LMBR1L (ENSBGRG00000001347) #10	DHH (ENSBGRG00000001304) #11	RHEBL1 (ENSBGRG00000001273) #12	ENSBGRG00000001247 #13	ENSBGRG00000001218 #13	PRKAG1 (ENSBGRG00000001150) #15	DDN (ENSBGRG00000001128) #16	WNT1 (ENSBGRG00000001101) #17	WNT10B (ENSBGRG00000001078) #18	ENSBGRG00000000979 #19	CCDC65 (ENSBGRG00000000948) #21	RND1 (ENSBGRG00000000933) #22	DDX23 (ENSBGRG00000000870) #23	CACNB3 (ENSBGRG00000000782) #24	ADCY6 (ENSBGRG00000000673) #25	TEX49 (ENSBGRG00000000640) #27	ENSBGRG00000000624 #28	KANSL2 (ENSBGRG00000000597) #29	OR5BS1P (ENSBGRG00000000585)	ENSBGRG00000000479 #30	ENSBGRG00000000462	ENSBGRG00000000452	ENSBGRG00000000448	ENSBGRG00000000442	ENSBGRG00000000434	ENSBGRG00000000426	ENSBGRG00000000359
Bos_b	ANCESTRAL SPECIES	4	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.dc.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00960000190898	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.ec	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00940000163803.i.b.a.a	ENSGT00970000197187	ENSGT00940000162388.B	ENSGT00940000162388.C.a	ENSGT00940000162388.C.b	ENSGT00940000162388.A.b	ENSGT00940000162388.A.a	ENSGT00940000159881.a.b.b
Cow	MODERN SPECIES	24	TUBA1C (ENSBTAG00000039992)	TUBA1A (ENSBTAG00000001489)	ENSBTAG00000052201	TUBA1B (ENSBTAG00000012244)	LMBR1L (ENSBTAG00000044048) #10	DHH (ENSBTAG00000000124) #11	RHEBL1 (ENSBTAG00000006557) #12	KMT2D (ENSBTAG00000014429) #13	PRKAG1 (ENSBTAG00000014426) #15	DDN (ENSBTAG00000014424) #16	WNT1 (ENSBTAG00000015364) #17	WNT10B (ENSBTAG00000015347) #18	ARF3 (ENSBTAG00000051755) #19	FKBP11 (ENSBTAG00000015828) #20	CCDC65 (ENSBTAG00000015825) #21	RND1 (ENSBTAG00000018773) #22	DDX23 (ENSBTAG00000021810) #23	CACNB3 (ENSBTAG00000021808) #24	ADCY6 (ENSBTAG00000005464) #25	TEX49 (ENSBTAG00000054993) #27	CCNT1 (ENSBTAG00000005861) #28	KANSL2 (ENSBTAG00000002693) #29	LALBA (ENSBTAG00000005859) #30	ENSBTAG00000051046	OR8S8 (ENSBTAG00000038290)	OR8S27 (ENSBTAG00000007706)	OR8S25 (ENSBTAG00000050247)	OR8S10 (ENSBTAG00000051668)	OR8S15 (ENSBTAG00000054691)	OR8S1 (ENSBTAG00000038670)	OR8S24 (ENSBTAG00000052728)
Hybrid Bos Indicus	MODERN SPECIES	24	ENSBIXG00005019629	ENSBIXG00005003208	ENSBIXG00005019748	LMBR1L (ENSBIXG00005019839) #10	DHH (ENSBIXG00005019876) #11	RHEBL1 (ENSBIXG00005005865) #12	KMT2D (ENSBIXG00005003303) #13	PRKAG1 (ENSBIXG00005003339) #15	DDN (ENSBIXG00005020214) #16	WNT1 (ENSBIXG00005020242) #17	WNT10B (ENSBIXG00005003396) #18	ENSBIXG00005020272	ENSBIXG00005003404	CCDC65 (ENSBIXG00005020299) #21	ENSBIXG00005020352 #19	RND1 (ENSBIXG00005003441) #22	DDX23 (ENSBIXG00005020544) #23	CACNB3 (ENSBIXG00005007344) #24	ADCY6 (ENSBIXG00005003512) #25	TEX49 (ENSBIXG00005006658) #27	ENSBIXG00005020791	CCNT1 (ENSBIXG00005020870) #28	KANSL2 (ENSBIXG00005006660) #29	OR5BS1P (ENSBIXG00005021006)	ENSBIXG00005003554 #30	ENSBIXG00005021075	ENSBIXG00005006598	ENSBIXG00005021096	ENSBIXG00005021105	ENSBIXG00005021112	ENSBIXG00005021120
American bison	MODERN SPECIES	3297	TUBA1A (ENSBBBG00000007243)	ENSBBBG00000023336	TUBA1B (ENSBBBG00000023348)	LMBR1L (ENSBBBG00000006114) #10	DHH (ENSBBBG00000023379) #11	RHEBL1 (ENSBBBG00000023390) #12	KMT2D (ENSBBBG00000023729) #13	PRKAG1 (ENSBBBG00000023811) #15	DDN (ENSBBBG00000023827) #16	WNT1 (ENSBBBG00000023837) #17	WNT10B (ENSBBBG00000023874) #18	ARF3 (ENSBBBG00000000297) #19	ENSBBBG00000023893 #20	ENSBBBG00000023906 #20	CCDC65 (ENSBBBG00000023926) #21	RND1 (ENSBBBG00000023931) #22	DDX23 (ENSBBBG00000006233) #23	CACNB3 (ENSBBBG00000024120) #24	ADCY6 (ENSBBBG00000006325) #25	TEX49 (ENSBBBG00000024301) #27	CCNT1 (ENSBBBG00000024356) #28	KANSL2 (ENSBBBG00000008714) #29	LALBA (ENSBBBG00000024432) #30	OR5BS1P (ENSBBBG00000009008)	ENSBBBG00000024447	ENSBBBG00000024452	EDDM13 (ENSBBBG00000024494)	ENSBBBG00000006390	ZNF583 (ENSBBBG00000024520)	ZNF582 (ENSBBBG00000006396)	ENSBBBG00000024546
Laurasiatheria_b	ANCESTRAL SPECIES	6	ENSGT00940000160203 #8	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000153832.f.y	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000159881.a.a.b	ENSGT00940000159881.a.b.b	ENSGT00940000159881.a.b.a
Carnivora	ANCESTRAL SPECIES	3	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000153832.f.y	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000159881.a.b.b	ENSGT00940000159881.a.b.a	ENSGT00940000159881.a.a.b
Caniformia	ANCESTRAL SPECIES	19	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.b.h	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000153832.f.y	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000159881.a.a.b.d	ENSGT00940000159881.a.b.b	ENSGT00940000159881.a.b.a
Caniformia_b	ANCESTRAL SPECIES	17	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00940000154457.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000153832.f.y	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000159881.a.a.b.c.a	ENSGT00940000159881.a.b.b	ENSGT00940000159881.a.b.a
Ursidae	ANCESTRAL SPECIES	36	ENSGT00950000185831	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.a	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000153832.f.y	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B.a
Ursus	ANCESTRAL SPECIES	39	ENSGT00950000185831	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.a	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000153832.f.y	ENSGT00940000161726 #30	ENSGT00940000162388.B.a	ENSGT00940000159881.a.a.b.c.a	ENSGT00940000162388.A	ENSGT00940000162388.B.b
Polar bear	MODERN SPECIES	262	ENSUMAG00000006609 ##9	TUBA1B (ENSUMAG00000006597)	LMBR1L (ENSUMAG00000006589) #10	DHH (ENSUMAG00000006584) #11	RHEBL1 (ENSUMAG00000006580) #12	ENSUMAG00000006572 #13	ENSUMAG00000006565 #13	ENSUMAG00000006564	PRKAG1 (ENSUMAG00000006562) #15	WNT1 (ENSUMAG00000006560) #17	WNT10B (ENSUMAG00000006558) #18	ENSUMAG00000006555 #19	FKBP11 (ENSUMAG00000006552) #20	ENSUMAG00000006550	CCDC65 (ENSUMAG00000006548) #21	RND1 (ENSUMAG00000006545) #22	DDX23 (ENSUMAG00000006538) #23	CACNB3 (ENSUMAG00000006493) #24	ADCY6 (ENSUMAG00000006483) #25	TEX49 (ENSUMAG00000006472) #27	CCNT1 (ENSUMAG00000006450) #28	KANSL2 (ENSUMAG00000006435) #29	ENSUMAG00000006431	LALBA (ENSUMAG00000006409) #30	ENSUMAG00000006405	ENSUMAG00000006397	ENSUMAG00000006394	OR8S1 (ENSUMAG00000006392)	ENSUMAG00000006389	ENSUMAG00000006386	ENSUMAG00000006382 #32
American black bear	MODERN SPECIES	751				LMBR1L (ENSUAMG00000027066) #10	DHH (ENSUAMG00000027067) #11	RHEBL1 (ENSUAMG00000027068) #12	KMT2D (ENSUAMG00000027069) #13	PRKAG1 (ENSUAMG00000027070) #15	DDN (ENSUAMG00000027071) #16	WNT1 (ENSUAMG00000027072) #17	WNT10B (ENSUAMG00000027073) #18	ARF3 (ENSUAMG00000027074) #19	FKBP11 (ENSUAMG00000027075) #20	ENSUAMG00000027076 #21	ENSUAMG00000027080 #21	RND1 (ENSUAMG00000027081) #22	DDX23 (ENSUAMG00000027082) #23	CACNB3 (ENSUAMG00000027084) #24
Giant Panda	MODERN SPECIES	7	SPATS2 (ENSAMEG00000000881)	DNAJC22 (ENSAMEG00000000876)	C1QL4 (ENSAMEG00000030468)	TROAP (ENSAMEG00000000850) #7	PRPH (ENSAMEG00000000783) #8	TUBA1C (ENSAMEG00000025910)	LMBR1L (ENSAMEG00000006887) #10	DHH (ENSAMEG00000006895) #11	RHEBL1 (ENSAMEG00000006903) #12	KMT2D (ENSAMEG00000006918) #13	DDN (ENSAMEG00000028769) #16	WNT1 (ENSAMEG00000007017) #17	WNT10B (ENSAMEG00000007028) #18	ENSAMEG00000026161 #19	CCDC65 (ENSAMEG00000007083) #21	RND1 (ENSAMEG00000028088) #22	DDX23 (ENSAMEG00000007123) #23	CACNB3 (ENSAMEG00000007171) #24	ADCY6 (ENSAMEG00000007210) #25	TEX49 (ENSAMEG00000007279) #27	CCNT1 (ENSAMEG00000007281) #28	KANSL2 (ENSAMEG00000007312) #29	ENSAMEG00000007338	LALBA (ENSAMEG00000007352) #30	OR5BS1P (ENSAMEG00000007376)	ENSAMEG00000030163	ENSAMEG00000029295	ENSAMEG00000030502	OR8S1 (ENSAMEG00000025995)	ENSAMEG00000030056	C12orf54 (ENSAMEG00000006120)
Mustelinae	ANCESTRAL SPECIES	33	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00940000154457.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000153832.f.y	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000159881.a.b.b	ENSGT00940000159881.a.a.b.c.b	ENSGT00940000162202.C ##32
American mink	MODERN SPECIES	196	PRPH (ENSNVIG00000006650) #8	TUBA1C (ENSNVIG00000006678)	TUBA1A (ENSNVIG00000006688)	ENSNVIG00000006708	LMBRL (ENSNVIG00000006723) #10	DHH (ENSNVIG00000006799) #11	RHEBL1 (ENSNVIG00000006821) #12	KMT2D (ENSNVIG00000006871) #13	PRKAG1 (ENSNVIG00000007086) #15	DDN (ENSNVIG00000007147) #16	WNT1 (ENSNVIG00000007159) #17	ENSNVIG00000007174 #18	ARF3 (ENSNVIG00000007196) #19	FKBP11 (ENSNVIG00000007239) #20	CCDC65 (ENSNVIG00000007265) #21	RND1 (ENSNVIG00000007275) #22	DDX23 (ENSNVIG00000007288) #23	CACNB3 (ENSNVIG00000007329) #24	ADCY6 (ENSNVIG00000007481) #25	TEX49 (ENSNVIG00000007724) #27	CCNT1 (ENSNVIG00000007751) #28	KANSL2 (ENSNVIG00000007784) #29	ENSNVIG00000007827	LALBA (ENSNVIG00000007843) #30	OR5BS1P (ENSNVIG00000007849)	ENSNVIG00000007858	ENSNVIG00000007864	ENSNVIG00000007869	ENSNVIG00000007870 ##32	OR8S1 (ENSNVIG00000007877)	ENSNVIG00000007881
Canidae	ANCESTRAL SPECIES	8	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.b.h	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000153832.f.y	ENSGT00940000153241.A.h	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B.c	ENSGT00940000162388.B.d.b	ENSGT00940000162388.B.d.a	ENSGT00940000162388.A	ENSGT00940000159881.a.a.b.d
Red fox	MODERN SPECIES	32	TROAP (ENSVVUG00000020927) #7	PRPH (ENSVVUG00000020924) #8	ENSVVUG00000020906	ENSVVUG00000020903	ENSVVUG00000020900	LMBR1L (ENSVVUG00000020897) #10	DHH (ENSVVUG00000020895) #11	RHEBL1 (ENSVVUG00000020894) #12	PRKAG1 (ENSVVUG00000019735) #15	DDN (ENSVVUG00000019700) #16	WNT1 (ENSVVUG00000019697) #17	WNT10B (ENSVVUG00000019690) #18	ARF3 (ENSVVUG00000019673) #19	ENSVVUG00000019671 #20	CCDC65 (ENSVVUG00000019666) #21	RND1 (ENSVVUG00000019659) #22	DDX23 (ENSVVUG00000019648) #23	CACNB3 (ENSVVUG00000019645) #24	ADCY6 (ENSVVUG00000019630) #25	TEX49 (ENSVVUG00000019619) #27	CCNT1 (ENSVVUG00000019590) #28	ENSVVUG00000019583	ENSVVUG00000019578	LALBA (ENSVVUG00000019572) #30	ENSVVUG00000019568	ENSVVUG00000019564	ENSVVUG00000019563	ENSVVUG00000019556	ENSVVUG00000019553	C12orf54 (ENSVVUG00000019545)	ZNF641 (ENSVVUG00000019539) #33
Canis_lupus	ANCESTRAL SPECIES	14	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.b.h	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000153832.f.y	ENSGT00940000153241.A.h	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B.c	ENSGT00940000162388.B.d.b	ENSGT00940000162388.B.d.a.b	ENSGT00940000162388.B.d.a.a	ENSGT00940000162388.A
Dingo	MODERN SPECIES	329	ENSCAFG00020013475	ENSCAFG00020013474	TUBA1A (ENSCAFG00020013458)	TUBA1B (ENSCAFG00020013431)	LMBR1L (ENSCAFG00020013423) #10	DHH (ENSCAFG00020013420) #11	RHEBL1 (ENSCAFG00020013417) #12	ENSCAFG00020013412 #13	PRKAG1 (ENSCAFG00020013408) #15	DDN (ENSCAFG00020013406) #16	WNT1 (ENSCAFG00020013401) #17	WNT10B (ENSCAFG00020013394) #18	ARF3 (ENSCAFG00020013389) #19	FKBP11 (ENSCAFG00020013388) #20	CCDC65 (ENSCAFG00020013387) #21	RND1 (ENSCAFG00020013386) #22	DDX23 (ENSCAFG00020013383) #23	CACNB3 (ENSCAFG00020013365) #24	ADCY6 (ENSCAFG00020013357) #25	TEX49 (ENSCAFG00020013356) #27	CCNT1 (ENSCAFG00020013349) #28	KANSL2 (ENSCAFG00020013339) #29	ENSCAFG00020013334	ENSCAFG00020013331	LALBA (ENSCAFG00020013310) #30	ENSCAFG00020013309	ENSCAFG00020013301	ENSCAFG00020013299	ENSCAFG00020013296	ENSCAFG00020013294	ENSCAFG00020013293
Dog	MODERN SPECIES	19	ENSCAFG00845020455 #7	PRPH (ENSCAFG00845020632) #8	ENSCAFG00845020819	TUBA1B (ENSCAFG00845021145)	LMBR1L (ENSCAFG00845021402) #10	DHH (ENSCAFG00845021487) #11	RHEBL1 (ENSCAFG00845021547) #12	KMT2D (ENSCAFG00845021787) #13	PRKAG1 (ENSCAFG00845022388) #15	DDN (ENSCAFG00845022517) #16	WNT1 (ENSCAFG00845022557) #17	WNT10B (ENSCAFG00845022647) #18	ENSCAFG00845022913 #19	FKBP11 (ENSCAFG00845023275) #20	CCDC65 (ENSCAFG00845023368) #21	RND1 (ENSCAFG00845023432) #22	DDX23 (ENSCAFG00845023512) #23	CACNB3 (ENSCAFG00845023805) #24	ADCY6 (ENSCAFG00845024352) #25	TEX49 (ENSCAFG00845024904) #27	CCNT1 (ENSCAFG00845024989) #28	KANSL2 (ENSCAFG00845025163) #29	LYZF2 (ENSCAFG00845025398)	LALBA (ENSCAFG00845025453) #30	OR5BS1P (ENSCAFG00845025525)	ENSCAFG00845025546	ENSCAFG00845025579	ENSCAFG00845025608	ENSCAFG00845025649	cOR8S14 (ENSCAFG00845025678)	cOR8S16 (ENSCAFG00845025719)
Felidae	ANCESTRAL SPECIES	2	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000153832.f.y	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000159881.a.a.b	ENSGT00940000159881.a.b.b	ENSGT00940000159881.a.a.a	ENSGT00940000166925
Panthera	ANCESTRAL SPECIES		ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000153832.f.y	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B.e	ENSGT00940000162388.B.f	ENSGT00940000159881.a.a.b	ENSGT00940000159881.a.b.b	ENSGT00940000159881.a.a.a
Panthera_a	ANCESTRAL SPECIES	5	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000153832.f.y	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B.e	ENSGT00940000162388.B.f	ENSGT00940000159881.a.a.b	ENSGT00940000159881.a.b.b	ENSGT00940000159881.a.a.a
lion	MODERN SPECIES	7	ENSPLOG00000011582	TUBA1A (ENSPLOG00000011490)	ENSPLOG00000011430	TUBA1B (ENSPLOG00000011373)	LMBR1L (ENSPLOG00000011098) #10	DHH (ENSPLOG00000011041) #11	RHEBL1 (ENSPLOG00000010984) #12	KMT2D (ENSPLOG00000010784) #13	PRKAG1 (ENSPLOG00000010608) #15	DDN (ENSPLOG00000010565) #16	WNT1 (ENSPLOG00000010521) #17	WNT10B (ENSPLOG00000010411) #18	ARF3 (ENSPLOG00000010349) #19	FKBP11 (ENSPLOG00000010230) #20	CCDC65 (ENSPLOG00000010162) #21	RND1 (ENSPLOG00000010124) #22	DDX23 (ENSPLOG00000010090) #23	CACNB3 (ENSPLOG00000009811) #24	TEX49 (ENSPLOG00000009719) #27	ADCY6 (ENSPLOG00000009398) #25	KANSL2 (ENSPLOG00000009219) #29	ENSPLOG00000009151	ENSPLOG00000009119	LALBA (ENSPLOG00000009064) #30	OR5BS1P (ENSPLOG00000009032)	ENSPLOG00000009003	ENSPLOG00000008991	ENSPLOG00000008974	OR8S1 (ENSPLOG00000008958)	ENSPLOG00000008937	C12orf54 (ENSPLOG00000008880)
leopard	MODERN SPECIES	77	TROAP (ENSPPRG00000023461) #7	PRPH (ENSPPRG00000022929) #8	ENSPPRG00000022793	ENSPPRG00000000268	TUBA1B (ENSPPRG00000001738)	LMBR1L (ENSPPRG00000002507) #10	DHH (ENSPPRG00000002928) #11	RHEBL1 (ENSPPRG00000003212) #12	PRKAG1 (ENSPPRG00000009137) #15	DDN (ENSPPRG00000009672) #16	WNT1 (ENSPPRG00000010414) #17	WNT10B (ENSPPRG00000011632) #18	ARF3 (ENSPPRG00000013155) #19	FKBP11 (ENSPPRG00000013896) #20	CCDC65 (ENSPPRG00000014354) #21	RND1 (ENSPPRG00000014543) #22	DDX23 (ENSPPRG00000015345) #23	CACNB3 (ENSPPRG00000022329) #24	ADCY6 (ENSPPRG00000002220) #25	TEX49 (ENSPPRG00000002478) #27	CCNT1 (ENSPPRG00000002985) #28	KANSL2 (ENSPPRG00000004003) #29	ENSPPRG00000004625	LALBA (ENSPPRG00000005035) #30	ENSPPRG00000020998	ENSPPRG00000021009	ENSPPRG00000021024	ENSPPRG00000021040	OR8S1 (ENSPPRG00000021056)	ENSPPRG00000021065	ENSPPRG00000005898
Tiger	MODERN SPECIES	14	TROAP (ENSPTIG00000021948) #7	PRPH (ENSPTIG00000019617) #8	ENSPTIG00000018218	ENSPTIG00000016981	ENSPTIG00000007278	LMBR1L (ENSPTIG00000002708) #10	DHH (ENSPTIG00000020962) #11	RHEBL1 (ENSPTIG00000020473) #12	PRKAG1 (ENSPTIG00000008554) #15	DDN (ENSPTIG00000007916) #16	WNT1 (ENSPTIG00000007101) #17	WNT10B (ENSPTIG00000005637) #18	ARF3 (ENSPTIG00000002553) #19	FKBP11 (ENSPTIG00000021680) #20	CCDC65 (ENSPTIG00000021454) #21	RND1 (ENSPTIG00000020347) #22	DDX23 (ENSPTIG00000018873) #23	CACNB3 (ENSPTIG00000014703) #24	ADCY6 (ENSPTIG00000009376) #25	TEX49 (ENSPTIG00000007788) #27	CCNT1 (ENSPTIG00000002066) #28	KANSL2 (ENSPTIG00000018738) #29	ENSPTIG00000017690	LALBA (ENSPTIG00000016605) #30	ENSPTIG00000000424	ENSPTIG00000000411	OR8S1 (ENSPTIG00000000392)	C12orf54 (ENSPTIG00000015156)	ENSPTIG00000000355 #32	ZNF641 (ENSPTIG00000013144) #33	ENSPTIG00000000286
Cat	MODERN SPECIES	238	PRPH (ENSFCAG00000014769) #8	TUBA1C (ENSFCAG00000037882)	ENSFCAG00000014767	TUBA1A (ENSFCAG00000038056)	LMBR1L (ENSFCAG00000000098) #10	DHH (ENSFCAG00000043756) #11	RHEBL1 (ENSFCAG00000000096) #12	KMT2D (ENSFCAG00000000093) #13	PRKAG1 (ENSFCAG00000000091) #15	DDN (ENSFCAG00000000090) #16	WNT1 (ENSFCAG00000000089) #17	WNT10B (ENSFCAG00000030007) #18	ARF3 (ENSFCAG00000037304) #19	FKBP11 (ENSFCAG00000035568) #20	CCDC65 (ENSFCAG00000000085) #21	RND1 (ENSFCAG00000000084) #22	DDX23 (ENSFCAG00000000082) #23	CACNB3 (ENSFCAG00000000080) #24	TEX49 (ENSFCAG00000022110) #27	ADCY6 (ENSFCAG00000000079) #25	ENSFCAG00000043415 #28	KANSL2 (ENSFCAG00000029449) #29	ENSFCAG00000034992	LALBA (ENSFCAG00000050644) #30	ENSFCAG00000026779	ENSFCAG00000023498	ENSFCAG00000026209	ENSFCAG00000031127	ENSFCAG00000026373 ##32	OR8S1 (ENSFCAG00000041999)	ENSFCAG00000034432
Laurasiatheria_c	ANCESTRAL SPECIES	5	ENSGT00940000160203 #8	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.C.b	ENSGT00940000159881.a.a.a	ENSGT00390000014843	ENSGT00940000162202.A #32	ENSGT00940000162202.B ##32
Equus	ANCESTRAL SPECIES	16	ENSGT00940000160203 #8	ENSGT00940000154457.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000153832.f.y	ENSGT00940000161726 #30	ENSGT00940000163803.e	ENSGT00940000162388.B	ENSGT00940000162388.C.b	ENSGT00940000166925.b	ENSGT00940000159881.a.a.a	ENSGT00980000199472	ENSGT00390000014843
Donkey	MODERN SPECIES	14	PRPH (ENSEASG00005001134) #8	TUBA1C (ENSEASG00005001123)	ENSEASG00005027053	TUBA1B (ENSEASG00005029815)	LMBR1L (ENSEASG00005001084) #10	DHH (ENSEASG00005027549) #11	RHEBL1 (ENSEASG00005001042) #12	KMT2D (ENSEASG00005000816) #13	PRKAG1 (ENSEASG00005000627) #15	DDN (ENSEASG00005038212) #16	WNT1 (ENSEASG00005000530) #17	WNT10B (ENSEASG00005000528) #18	ARF3 (ENSEASG00005032704) #19	FKBP11 (ENSEASG00005037660) #20	CCDC65 (ENSEASG00005000473) #21	RND1 (ENSEASG00005000462) #22	DDX23 (ENSEASG00005000455) #23	CACNB3 (ENSEASG00005000426) #24	ADCY6 (ENSEASG00005000395) #25	TEX49 (ENSEASG00005000382) #27	CCNT1 (ENSEASG00005000368) #28	KANSL2 (ENSEASG00005000346) #29	ENSEASG00005000118 #30	ENSEASG00005000318	OR5BS1P (ENSEASG00005032536)	ENSEASG00005024483	ENSEASG00005033241	ENSEASG00005023527	ENSEASG00005031846	ENSEASG00005023526	OR8S1 (ENSEASG00005028324)
Horse	MODERN SPECIES	27	TROAP (ENSECAG00000017926) #7	PRPH (ENSECAG00000010432) #8	TUBA1A (ENSECAG00000030778)	TUBA1B (ENSECAG00000059551)	ENSECAG00000033690	LMBR1L (ENSECAG00000011362) #10	DHH (ENSECAG00000010603) #11	RHEBL1 (ENSECAG00000001442) #12	KMT2D (ENSECAG00000017946) #13	PRKAG1 (ENSECAG00000011134) #15	DDN (ENSECAG00000007971) #16	WNT1 (ENSECAG00000009064) #17	WNT10B (ENSECAG00000008298) #18	FKBP11 (ENSECAG00000006658) #19	CCDC65 (ENSECAG00000022789) #21	RND1 (ENSECAG00000020971) #22	DDX23 (ENSECAG00000016681) #23	CACNB3 (ENSECAG00000012018) #24	ADCY6 (ENSECAG00000022288) #25	CCNT1 (ENSECAG00000015768) #28	KANSL2 (ENSECAG00000013540) #29	ENSECAG00000010121	LALBA (ENSECAG00000001401) #30	ENSECAG00000034026	OR8S15 (ENSECAG00000028893)	OR8S34 (ENSECAG00000047119) ##32	OR8S33 (ENSECAG00000052992)	OR8S24 (ENSECAG00000045091)	ENSECAG00000050123	ENSECAG00000037359	C12orf54 (ENSECAG00000039802)
Chiroptera	ANCESTRAL SPECIES	4	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.s.a #15	ENSGT00950000183019.f.b.a.t #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162202.A #32	ENSGT00940000162121 #33	ENSGT00730000111596	ENSGT01100000263574.a	ENSGT00390000002978 #36	ENSGT00940000159366 #37
Microchiroptera	ANCESTRAL SPECIES	2	ENSGT00950000182825.A.a.b.a.b.a.b.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a.t #15	ENSGT00950000183019.f.b.a.s.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162202.A #32	ENSGT00940000162121 #33	ENSGT00730000111596	ENSGT00390000002978 #36	ENSGT00940000159366 #37	ENSGT00940000155440.d
Greater horseshoe bat	MODERN SPECIES	1	TROAP (ENSRFEG00010010867) #7	PRPH (ENSRFEG00010010768) #8	ENSRFEG00010010573	TUBA1B (ENSRFEG00010010426)	LMBR1L (ENSRFEG00010010270) #10	DHH (ENSRFEG00010010213) #11	ENSRFEG00010010186	ENSRFEG00010009959 #13	ENSRFEG00010009659 #15	DDN (ENSRFEG00010009634) #16	WNT1 (ENSRFEG00010009601) #17	WNT10B (ENSRFEG00010009503) #18	FKBP11 (ENSRFEG00010009367) #20	CCDC65 (ENSRFEG00010009326) #21	ENSRFEG00010009293	RND1 (ENSRFEG00010009261) #22	DDX23 (ENSRFEG00010009126) #23	CACNB3 (ENSRFEG00010008761) #24	ADCY6 (ENSRFEG00010008619) #25	TEX49 (ENSRFEG00010008549) #27	CCNT1 (ENSRFEG00010008442) #28	ENSRFEG00010008258 #29	ENSRFEG00010008162	LALBA (ENSRFEG00010008073) #30	OR5BS1P (ENSRFEG00010008042)	ENSRFEG00010008030 #32	ZNF641 (ENSRFEG00010007923) #33	ENSRFEG00010007885	CCDC184 (ENSRFEG00010007804) #36	ASB8 (ENSRFEG00010007697) #37	PFKM (ENSRFEG00010007343)
Microbat	MODERN SPECIES	1028	C1QL4 (ENSMLUG00000022468)	TROAP (ENSMLUG00000004347) #7	PRPH (ENSMLUG00000009808) #8	ENSMLUG00000024840	TUBA1A (ENSMLUG00000010845)	TUBA1B (ENSMLUG00000002622)	DHH (ENSMLUG00000008353) #11	RHEBL1 (ENSMLUG00000008343) #12	KMT2D (ENSMLUG00000011179) #13	PRKAG1 (ENSMLUG00000011156) #15	WNT1 (ENSMLUG00000023725) #17	WNT10B (ENSMLUG00000011105) #18	ARF3 (ENSMLUG00000029846) #19	FKBP11 (ENSMLUG00000011084) #20	CCDC65 (ENSMLUG00000011073) #21	RND1 (ENSMLUG00000011066) #22	ENSMLUG00000011033 #23	CACNB3 (ENSMLUG00000010986) #24	ADCY6 (ENSMLUG00000010943) #25	TEX49 (ENSMLUG00000010932) #27	CCNT1 (ENSMLUG00000010910) #28	KANSL2 (ENSMLUG00000012761) #29	ENSMLUG00000028552	ENSMLUG00000028621	ENSMLUG00000027828	LALBA (ENSMLUG00000010895) #30	OR5BS1P (ENSMLUG00000010889)	ENSMLUG00000022240 #32	ENSMLUG00000027444	ZNF641 (ENSMLUG00000003695) #33	ENSMLUG00000003687
Megabat	MODERN SPECIES	2398																RND1 (ENSPVAG00000009824) #22	DDX23 (ENSPVAG00000009818) #23	CACNB3 (ENSPVAG00000009816) #24	ADCY6 (ENSPVAG00000009814) #25
Atlantogenata	ANCESTRAL SPECIES	33	ENSGT00390000012132 #7	ENSGT00940000160203 #8	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B	ENSGT00940000162388.A	ENSGT00940000159881.a.b.b	ENSGT00940000159881.a.b.a	ENSGT00940000163941.A	ENSGT00940000162202.C ##32
Afrotheria	ANCESTRAL SPECIES	25	ENSGT00390000012132 #7	ENSGT00940000160203 #8	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B.g	ENSGT00940000162388.B.h	ENSGT00940000162388.A	ENSGT00940000159881.a.b.b	ENSGT00940000159881.a.b.a	ENSGT00940000163941.A	ENSGT00940000162202.C ##32
Afrotheria_a	ANCESTRAL SPECIES	24	ENSGT00390000012132 #7	ENSGT00940000160203 #8	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000165147	ENSGT00940000161726 #30	ENSGT00940000163803	ENSGT00940000162388.B.g	ENSGT00940000162388.B.h	ENSGT00940000162388.A	ENSGT00940000159881.a.b.b	ENSGT00940000159881.a.b.a	ENSGT00940000163941.A	ENSGT00940000162202.C ##32
Elephant	MODERN SPECIES	196	TROAP (ENSLAFG00000017503) #7	PRPH (ENSLAFG00000003951) #8	ENSLAFG00000029073	TUBA1B (ENSLAFG00000010021)	LMBR1L (ENSLAFG00000010017) #10	DHH (ENSLAFG00000010011) #11	RHEBL1 (ENSLAFG00000010008) #12	KMT2D (ENSLAFG00000009989) #13	PRKAG1 (ENSLAFG00000005040) #15	DDN (ENSLAFG00000022385) #16	WNT1 (ENSLAFG00000004211) #17	WNT10B (ENSLAFG00000004210) #18	ARF3 (ENSLAFG00000004207) #19	FKBP11 (ENSLAFG00000004202) #20	CCDC65 (ENSLAFG00000004200) #21	RND1 (ENSLAFG00000010202) #22	DDX23 (ENSLAFG00000014227) #23	CACNB3 (ENSLAFG00000014224) #24	ADCY6 (ENSLAFG00000014218) #25	CCNT1 (ENSLAFG00000029881) #28	KANSL2 (ENSLAFG00000014200) #29	ENSLAFG00000030854	LALBA (ENSLAFG00000014199) #30	ENSLAFG00000027094	ENSLAFG00000021927	ENSLAFG00000031095	ENSLAFG00000026241	ENSLAFG00000030518	ENSLAFG00000029710	ENSLAFG00000029814	ENSLAFG00000027869
Hyrax	MODERN SPECIES	5107																RND1 (ENSPCAG00000002103) #22	DDX23 (ENSPCAG00000002016) #23	CACNB3 (ENSPCAG00000001967) #24
Tenrec	MODERN SPECIES	8954															ENSETEG00000017944 #21	RND1 (ENSETEG00000017942) #22
Xenarthra	ANCESTRAL SPECIES	73	ENSGT00390000012136	ENSGT00940000155969	ENSGT00390000012132 #7	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00940000154457.a.a.o	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27
Armadillo	MODERN SPECIES	311	DNAJC22 (ENSDNOG00000001855)	C1QL4 (ENSDNOG00000017845)	TROAP (ENSDNOG00000017843) #7	PRPH (ENSDNOG00000035037) #8	ENSDNOG00000004121	ENSDNOG00000039572	RHEBL1 (ENSDNOG00000006437) #12	KMT2D (ENSDNOG00000041118) #13	PRKAG1 (ENSDNOG00000006640) #15	DDN (ENSDNOG00000042932) #16	WNT1 (ENSDNOG00000006617) #17	WNT10B (ENSDNOG00000006613) #18	ARF3 (ENSDNOG00000010454) #19	ENSDNOG00000035391 #20	CCDC65 (ENSDNOG00000006591) #21	RND1 (ENSDNOG00000035948) #22	DDX23 (ENSDNOG00000043176) #23	CACNB3 (ENSDNOG00000043665) #24	ADCY6 (ENSDNOG00000040679) #25	TEX49 (ENSDNOG00000048512) #27
Marsupialia	ANCESTRAL SPECIES	24	ENSGT00950000182825.A.a.b.a.a	ENSGT00950000182825.A.a.b.a.b.a.a.b	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00730000111596	ENSGT00390000002978 #36	ENSGT00940000159366 #37	ENSGT00940000155440.d	ENSGT00940000155489.b	ENSGT00940000155224	ENSGT00940000155473	ENSGT00940000159065
Marsupialia_b	ANCESTRAL SPECIES	12	ENSGT00950000182825.A.a.b.a.a	ENSGT00950000182825.A.a.b.a.b.a.a.b	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.b.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a.i #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00730000111596	ENSGT00390000002978 #36	ENSGT00940000159366 #37	ENSGT00940000155440.d	ENSGT00940000155489.b	ENSGT00940000155224	ENSGT00940000155473	ENSGT00940000159065
Diprotodontia	ANCESTRAL SPECIES	29	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.b	ENSGT00950000182825.A.a.b.a.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a.i #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00730000111596	ENSGT00390000002978 #36	ENSGT00940000159366 #37	ENSGT00940000155440.d	ENSGT00940000155489.b	ENSGT00940000155224	ENSGT00940000155473	ENSGT00940000159065
Diprotodontia_a	ANCESTRAL SPECIES	29	ENSGT00940000160203 #8	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.b	ENSGT00950000182825.A.a.b.a.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a.i #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00940000161726 #30	ENSGT00730000111596	ENSGT00390000002978 #36	ENSGT00940000159366.g #37	ENSGT00940000155440.d	ENSGT00940000155489.b	ENSGT00940000155224	ENSGT00940000155473	ENSGT00940000159065
Common wonbat	MODERN SPECIES	1128	C1QL4 (ENSVURG00010006616)	PRPH (ENSVURG00010006599) #8	ENSVURG00010006593	ENSVURG00010006586	ENSVURG00010006581	LMBR1L (ENSVURG00010006566) #10	DHH (ENSVURG00010006554) #11	ENSVURG00010006474 #13	ENSVURG00010006434 #15	ENSVURG00010006430 #16	WNT1 (ENSVURG00010006417) #17	WNT10B (ENSVURG00010006404) #18	ARF3 (ENSVURG00010006396) #19	ENSVURG00010006389 #20	CCDC65 (ENSVURG00010006366) #21	RND1 (ENSVURG00010006356) #22	DDX23 (ENSVURG00010006330) #23	CACNB3 (ENSVURG00010006214) #24	ADCY6 (ENSVURG00010006156) #25	TEX49 (ENSVURG00010006146) #27	CCNT1 (ENSVURG00010006120) #28	KANSL2 (ENSVURG00010006093) #29	ENSVURG00010006084 #30	ASB8 (ENSVURG00010006046) #37	PFKM (ENSVURG00010005884)	SENP1 (ENSVURG00010005800)	COL2A1 (ENSVURG00010005638)	VDR (ENSVURG00010005603)	HDAC7 (ENSVURG00010005565)	SLC48A1 (ENSVURG00010005551)	RAPGEF3 (ENSVURG00010005514)
koala	MODERN SPECIES	309														ENSPCIG00000035336 #21	ENSPCIG00000037193 #20	RND1 (ENSPCIG00000002332) #22	DDX23 (ENSPCIG00000027691) #23	CACNB3 (ENSPCIG00000027695) #24	ADCY6 (ENSPCIG00000027700) #25	TEX49 (ENSPCIG00000027707) #27	CCNT1 (ENSPCIG00000027711) #28	KANSL2 (ENSPCIG00000027713) #29	LALBA (ENSPCIG00000004161) #30	ENSPCIG00000016478 #37	ENSPCIG00000016482	CCDC184 (ENSPCIG00000016483) #36	ENSPCIG00000032651 #37	PFKM (ENSPCIG00000015868)	SENP1 (ENSPCIG00000014356)	COL2A1 (ENSPCIG00000035466)	VDR (ENSPCIG00000036228)
Wallaby	MODERN SPECIES	12211																RND1 (ENSMEUG00000000881) #22
Tasmanian devil	MODERN SPECIES	4	ENSSHAG00000009120	KCNH3 (ENSSHAG00000008412)	SPATS2 (ENSSHAG00000007068)	C1QL4 (ENSSHAG00000005722)	ENSSHAG00000005623 #7	PRPH (ENSSHAG00000005303) #8	ENSSHAG00000013379	ENSSHAG00000021106	TUBA1A (ENSSHAG00000025605)	LMBR1L (ENSSHAG00000005343) #10	DHH (ENSSHAG00000027357) #11	PRKAG1 (ENSSHAG00000003385) #15	ENSSHAG00000003208 #16	WNT1 (ENSSHAG00000001436) #17	WNT10B (ENSSHAG00000002602) #18	ENSSHAG00000030963 #22	ARF3 (ENSSHAG00000029764) #19	CCDC65 (ENSSHAG00000023185) #21	DDX23 (ENSSHAG00000006590) #23	ENSSHAG00000028151 #24	ENSSHAG00000007601 #27	ENSSHAG00000007370 #25	ENSSHAG00000006801 #28	ENSSHAG00000026560 #29	ENSSHAG00000003347	ENSSHAG00000001583	ENSSHAG00000024530 #36	ENSSHAG00000001392 #30	ENSSHAG00000029127	ASB8 (ENSSHAG00000030428) #37	PFKM (ENSSHAG00000031357)
Platypus	MODERN SPECIES	1	C1QL4 (ENSOANG00000043062)	ENSOANG00000002869 #7	PRPH (ENSOANG00000043342) #8	TUBA1B (ENSOANG00000047868)	LMBR1L (ENSOANG00000000135) #10	DHH (ENSOANG00000045795) #11	ENSOANG00000000139 #12	ENSOANG00000036319 #13	PRKAG1 (ENSOANG00000029421) #15	WNT1 (ENSOANG00000040219) #17	ENSOANG00000049154 #16	WNT10B (ENSOANG00000047168) #18	ARF3 (ENSOANG00000047072) #19	FKBP11 (ENSOANG00000040027) #20	CCDC65 (ENSOANG00000047800) #21	RND1 (ENSOANG00000039020) #22	DDX23 (ENSOANG00000039844) #23	CACNB3 (ENSOANG00000012839) #24	ADCY6 (ENSOANG00000008088) #25	ENSOANG00000032004 #27	CCNT1 (ENSOANG00000047892) #28	KANSL2 (ENSOANG00000005844) #29	ENSOANG00000048101	TMBIM6 (ENSOANG00000041902)	FMNL3 (ENSOANG00000011885)	PRPF40B (ENSOANG00000037973)	ATG101 (ENSOANG00000046188)	NR4A1 (ENSOANG00000048887)	TAMALIN (ENSOANG00000047958)	ACVR1B (ENSOANG00000037991)	ACVRL1 (ENSOANG00000003970)
Sauria	ANCESTRAL SPECIES	25	ENSGT00950000182825.A.a.b.a.a	ENSGT00950000182825.A.a.b.a.b.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.b	ENSGT00940000154457.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00530000063607.a	ENSGT01050000244940.a.a	ENSGT00940000159962	ENSGT00930000150980.b	ENSGT00950000185385	ENSGT00390000016511	ENSGT00950000183038.a.b.a	ENSGT00530000063734.b	ENSGT00940000157032
Lepidosauria	ANCESTRAL SPECIES	66								ENSGT00940000156785	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00530000063607.a	ENSGT01050000244940.a.a	ENSGT00940000159962	ENSGT00930000150980.b	ENSGT00950000185385	ENSGT00390000016511	ENSGT00950000183038.a.b.a	ENSGT00530000063734.b	ENSGT00940000157032
Episquamata	ANCESTRAL SPECIES	4	ENSGT00940000164642	ENSGT00940000161079	ENSGT00530000063647.B	ENSGT00940000155746	ENSGT01030000234570.d.b.a.a.a.b	ENSGT01030000234570.d.b.a.a.b	ENSGT00940000156561.b	ENSGT00940000156785	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00530000063607.a	ENSGT01050000244940.a.a	ENSGT00940000159962	ENSGT00930000150980.b	ENSGT00390000010523.d	ENSGT00940000154256	ENSGT00440000033468.c.a	ENSGT00390000011466	ENSGT00940000154118.a.a.a.b
Toxicofera	ANCESTRAL SPECIES	19	ENSGT00940000164642	ENSGT00940000161079	ENSGT00530000063647.B	ENSGT00940000155746	ENSGT01030000234570.d.b.a.a.a.b	ENSGT01030000234570.d.b.a.a.b	ENSGT00940000156561.b	ENSGT00940000156785	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00530000063607.a	ENSGT01050000244940.a.a	ENSGT00940000159962	ENSGT00930000150980.b	ENSGT00390000010523.d	ENSGT00940000154256	ENSGT00440000033468.c.a	ENSGT00390000011466	ENSGT00940000154118.a.a.a.b
Elapidae	ANCESTRAL SPECIES	2	ENSGT00940000155330	ENSGT00950000183167.a.b.b.b	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00950000185372	ENSGT00390000000685	ENSGT00390000010077	ENSGT00950000182882.A.a	ENSGT00940000160845	ENSGT00940000160329.a #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00530000063607.a	ENSGT01050000244940.a.a	ENSGT00940000159962	ENSGT00930000150980.b	ENSGT00390000010523.d	ENSGT00940000154256	ENSGT00440000033468.c.a	ENSGT00390000011466	ENSGT00940000154118.a.a.a.b
Elapidae_a	ANCESTRAL SPECIES	54	ENSGT00940000155330	ENSGT00950000183167.a.b.b.b	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00950000185372	ENSGT00390000000685	ENSGT00390000010077	ENSGT00950000182882.A.a	ENSGT00940000160845	ENSGT00940000160329.a #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00530000063607.a	ENSGT01050000244940.a.a	ENSGT00940000159962	ENSGT00930000150980.b	ENSGT00950000185385	ENSGT00390000010523.d	ENSGT00940000154256	ENSGT00440000033468.c.a	ENSGT00390000011466
Acanthophiinae	ANCESTRAL SPECIES	53	ENSGT00940000155330	ENSGT00950000183167.a.b.b.b	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00950000185372	ENSGT00390000000685	ENSGT00390000010077	ENSGT00950000182882.A.a	ENSGT00940000160845	ENSGT00940000160329.a #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a.g #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00530000063607.a	ENSGT01050000244940.a.a	ENSGT00940000159962	ENSGT00930000150980.b	ENSGT00950000185385	ENSGT00390000010523.d	ENSGT00940000154256	ENSGT00440000033468.c.a	ENSGT00390000011466	ENSGT00940000154118.a.a.a.b
Eastern brown snake	MODERN SPECIES	72	CTDSP2 (ENSPTXG00000006974)	SLC11A2 (ENSPTXG00000006972)	LETMD1 (ENSPTXG00000006970)	CSRNP2 (ENSPTXG00000006969)	TFCP2 (ENSPTXG00000006967)	POU6F1 (ENSPTXG00000006965)	ENSPTXG00000006964	DAZAP2 (ENSPTXG00000006962)	SMAGP (ENSPTXG00000006961)	GALNT6 (ENSPTXG00000006960)	ENSPTXG00000006959 #17	WNT10B (ENSPTXG00000006958) #18	ARF3 (ENSPTXG00000006957) #19	FKBP11 (ENSPTXG00000006956) #20	CCDC65 (ENSPTXG00000006894) #21	RND1 (ENSPTXG00000006892) #22	DDX23 (ENSPTXG00000006889) #23	CACNB3 (ENSPTXG00000006887) #24	ADCY6 (ENSPTXG00000006885) #25	CCNT1 (ENSPTXG00000006884) #28	KANSL2 (ENSPTXG00000006881) #29	NCKAP5L (ENSPTXG00000006880)	TMBIM6 (ENSPTXG00000006878)	FMNL3 (ENSPTXG00000006243)	PRPF40B (ENSPTXG00000006240)	ENSPTXG00000006237	PTGES3 (ENSPTXG00000006236)	NACA (ENSPTXG00000006235)	PRIM1 (ENSPTXG00000013516)	ENSPTXG00000013514	ENSPTXG00000013513
Mainland tiger snake	MODERN SPECIES	90	SLC11A2 (ENSNSUG00000003504)	LETMD1 (ENSNSUG00000003506)	CSRNP2 (ENSNSUG00000003512)	TFCP2 (ENSNSUG00000003517)	ENSNSUG00000003526	ENSNSUG00000003527	DAZAP2 (ENSNSUG00000003528)	SMAGP (ENSNSUG00000003535)	BIN2 (ENSNSUG00000003538)	GALNT6 (ENSNSUG00000003566)	WNT1 (ENSNSUG00000003574) #17	WNT10B (ENSNSUG00000003581) #18	ENSNSUG00000003589 #19	FKBP11 (ENSNSUG00000003593) #20	CCDC65 (ENSNSUG00000003595) #21	RND1 (ENSNSUG00000003668) #22	DDX23 (ENSNSUG00000003689) #23	CACNB3 (ENSNSUG00000003756) #24
Blue-lipped sea krait	MODERN SPECIES	1669																RND1 (ENSLLTG00000006384) #22	DDX23 (ENSLLTG00000006365) #23	CACNB3 (ENSLLTG00000014112) #24
Indian cobra	MODERN SPECIES	1	CTDSP2 (ENSNNAG00000012418)	SLC11A2 (ENSNNAG00000012373)	LETMD1 (ENSNNAG00000012157)	CSRNP2 (ENSNNAG00000012121)	TFCP2 (ENSNNAG00000012088)	POU6F1 (ENSNNAG00000012063)	ENSNNAG00000012042	DAZAP2 (ENSNNAG00000012033)	SMAGP (ENSNNAG00000012009)	GALNT6 (ENSNNAG00000011966)	WNT1 (ENSNNAG00000011934) #17	WNT10B (ENSNNAG00000011855) #18	ARF3 (ENSNNAG00000011843) #19	FKBP11 (ENSNNAG00000011832) #20	CCDC65 (ENSNNAG00000011803) #21	RND1 (ENSNNAG00000011770) #22	DDX23 (ENSNNAG00000011713) #23	CACNB3 (ENSNNAG00000011651) #24	ENSNNAG00000011638	ADCY6 (ENSNNAG00000010911) #25	CCNT1 (ENSNNAG00000010829) #28	KANSL2 (ENSNNAG00000010712) #29	NCKAP5L (ENSNNAG00000010637)	TMBIM6 (ENSNNAG00000010618)	FMNL3 (ENSNNAG00000009336)	PRPF40B (ENSNNAG00000009183)	ENSNNAG00000009163	PTGES3 (ENSNNAG00000009137)	NACA (ENSNNAG00000008952)	PRIM1 (ENSNNAG00000008835)	ENSNNAG00000008689
Lizard	MODERN SPECIES	1	SMARCC2 (ENSACAG00000007714)	MYL6 (ENSACAG00000007876)	ENSACAG00000022592	ESYT1 (ENSACAG00000007931)	ENSACAG00000008047	PRKAG1 (ENSACAG00000008069) #15	DDN (ENSACAG00000027539) #16	WNT1 (ENSACAG00000038804) #17	WNT10B (ENSACAG00000008227) #18	ARF3 (ENSACAG00000008240) #19	FKBP11 (ENSACAG00000039190) #20	CCDC65 (ENSACAG00000008278) #21	ENSACAG00000040367	ENSACAG00000040754	ENSACAG00000008308	RND1 (ENSACAG00000036936) #22	DDX23 (ENSACAG00000025589) #23	CACNB3 (ENSACAG00000026984) #24	ADCY6 (ENSACAG00000008435) #25	ENSACAG00000045202	ENSACAG00000042664	TEX49 (ENSACAG00000028784) #27	CCNT1 (ENSACAG00000008649) #28	KANSL2 (ENSACAG00000008776) #29	NCKAP5L (ENSACAG00000008804)	TMBIM6 (ENSACAG00000008821)	FMNL3 (ENSACAG00000008940)	ENSACAG00000040132	PRPF40B (ENSACAG00000009074)	ENSACAG00000043897	ENSACAG00000009130
Laterata	ANCESTRAL SPECIES	1	ENSGT00940000164642	ENSGT00940000161079.m	ENSGT00530000063647.B	ENSGT00940000155746	ENSGT01030000234570.d.b.a.a.a.b	ENSGT01030000234570.d.b.a.a.b	ENSGT00940000156561.b	ENSGT00940000156785	ENSGT00950000183019.f.b.a #15	ENSGT00990000213996	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00530000063607.a	ENSGT01050000244940.a.a	ENSGT00940000159962	ENSGT00930000150980.b	ENSGT00390000010523.d	ENSGT00940000154256	ENSGT00440000033468.c.a	ENSGT00390000011466	ENSGT00940000154118.a.a.a.b
Common wall lizard	MODERN SPECIES	10	ENSPMRG00000019968	B4GALNT1 (ENSPMRG00000019981)	OS9 (ENSPMRG00000019992)	SMARCC2 (ENSPMRG00000020055)	ENSPMRG00000020127	ENSPMRG00000020131	ESYT1 (ENSPMRG00000020150)	INPP1 (ENSPMRG00000020184)	PRKAG1 (ENSPMRG00000020195) #15	ENSPMRG00000020212	WNT1 (ENSPMRG00000020219) #17	WNT10B (ENSPMRG00000020233) #18	ARF3 (ENSPMRG00000020239) #19	FKBP11 (ENSPMRG00000020247) #20	CCDC65 (ENSPMRG00000020261) #21	RND1 (ENSPMRG00000020270) #22	DDX23 (ENSPMRG00000020281) #23	CACNB3 (ENSPMRG00000020335) #24	ADCY6 (ENSPMRG00000020545) #25	ENSPMRG00000020976	CCNT1 (ENSPMRG00000020978) #28	KANSL2 (ENSPMRG00000020997) #29	NCKAP5L (ENSPMRG00000021064)	TMBIM6 (ENSPMRG00000021105)	FMNL3 (ENSPMRG00000021374)	PRPF40B (ENSPMRG00000022297)	ENSPMRG00000022316	PTGES3 (ENSPMRG00000022334)	ENSPMRG00000022361	PRIM1 (ENSPMRG00000022380)	ENSPMRG00000022483
Argentine black and white tegu	MODERN SPECIES	18	CS (ENSSMRG00000012109)	ENSSMRG00000012090	NABP2 (ENSSMRG00000012087)	RNF41 (ENSSMRG00000012083)	SMARCC2 (ENSSMRG00000012077)	MYL6 (ENSSMRG00000012073)	ENSSMRG00000012071	ESYT1 (ENSSMRG00000012069)	INPP1 (ENSSMRG00000012047)	PRKAG1 (ENSSMRG00000012046) #15	WNT1 (ENSSMRG00000012042) #17	WNT10B (ENSSMRG00000012040) #18	ARF3 (ENSSMRG00000012037) #19	FKBP11 (ENSSMRG00000012020) #20	CCDC65 (ENSSMRG00000012018) #21	RND1 (ENSSMRG00000012016) #22	DDX23 (ENSSMRG00000012008) #23	CACNB3 (ENSSMRG00000012001) #24	ADCY6 (ENSSMRG00000011989) #25	TEX49 (ENSSMRG00000011949) #27	CCNT1 (ENSSMRG00000011948) #28	KANSL2 (ENSSMRG00000011945) #29	NCKAP5L (ENSSMRG00000011944)	ENSSMRG00000011943	TMBIM6 (ENSSMRG00000011940)	FMNL3 (ENSSMRG00000009293)	PRPF40B (ENSSMRG00000009282)	ENSSMRG00000009281	ENSSMRG00000009279	PTGES3 (ENSSMRG00000009278)	NACA (ENSSMRG00000009276)
tuatara	MODERN SPECIES	1096	C1QL4 (ENSSPUG00000015363)	DNAJC22 (ENSSPUG00000015370)	SPATS2 (ENSSPUG00000015381)	KCNH3 (ENSSPUG00000015392)	MCRS1 (ENSSPUG00000015423)	ITGA7 (ENSSPUG00000015549)	ENSSPUG00000015909	ENSSPUG00000015917	RDH5 (ENSSPUG00000015921)	CD63 (ENSSPUG00000015932)	ENSSPUG00000015944	PRKAG1 (ENSSPUG00000015960) #15	WNT1 (ENSSPUG00000015975) #17	ARF3 (ENSSPUG00000015988) #19	FKBP11 (ENSSPUG00000015994) #20	RND1 (ENSSPUG00000016028) #22	DDX23 (ENSSPUG00000016044) #23	CACNB3 (ENSSPUG00000016080) #24	ADCY6 (ENSSPUG00000016123) #25	CCNT1 (ENSSPUG00000016139) #28	KANSL2 (ENSSPUG00000016149) #29	NCKAP5L (ENSSPUG00000016206)	TMBIM6 (ENSSPUG00000016306)	FMNL3 (ENSSPUG00000016321)	PRPF40B (ENSSPUG00000016351)	ENSSPUG00000016373	NR4A1 (ENSSPUG00000016379)	TAMALIN (ENSSPUG00000016387)	ACVR1B (ENSSPUG00000016402)	ENSSPUG00000016412	SCN8A (ENSSPUG00000016429)
Archelosauria	ANCESTRAL SPECIES	26	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00950000182825.A.a.b.a.a	ENSGT00950000182825.A.a.b.a.b.a.b	ENSGT00940000154457.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00530000063607.a	ENSGT01050000244940.a.a	ENSGT00940000159962	ENSGT00930000150980.b	ENSGT00950000185385	ENSGT00390000016511	ENSGT00950000183038.a.b.a	ENSGT00530000063734.b	ENSGT00940000157032
Cryptodira	ANCESTRAL SPECIES	25	ENSGT00390000012132 #7	ENSGT00940000160203 #8	ENSGT00940000154457.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B.h #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00530000063607.a	ENSGT01050000244940.a.a	ENSGT00940000159962	ENSGT00930000150980.b	ENSGT00950000185385	ENSGT00390000016511	ENSGT00950000183038.a.b.a	ENSGT00530000063734.b	ENSGT00940000157032
Testudinoidea	ANCESTRAL SPECIES	21	ENSGT00940000154457.a.b	ENSGT00940000154457.a.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B.h #21	ENSGT00940000153804.B.g #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00530000063607.a	ENSGT01050000244940.a.a	ENSGT00940000159962	ENSGT00930000150980.b	ENSGT00950000185385	ENSGT00390000016511	ENSGT00950000183038.a.b.a	ENSGT00530000063734.b	ENSGT00940000157032
Testudinidae	ANCESTRAL SPECIES	25	ENSGT00940000154457.a.b	ENSGT00940000154457.a.a	ENSGT00950000182825.A.a.b.a.b.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B.h #21	ENSGT00940000153804.B.g #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00530000063607.a	ENSGT01050000244940.a.a	ENSGT00940000159962	ENSGT00930000150980.b	ENSGT00950000185385	ENSGT00390000016511	ENSGT00950000183038.a.b.a	ENSGT00530000063734.b	ENSGT00940000157032	ENSGT00940000164733
Goode s thornscrub tortoise	MODERN SPECIES	17	ENSGEVG00005007895	ENSGEVG00005007919	ENSGEVG00005007941	LMBR1L (ENSGEVG00005007977) #10	DHH (ENSGEVG00005008078) #11	RHEBL1 (ENSGEVG00005008190) #12	ENSGEVG00005008350 #13	PRKAG1 (ENSGEVG00005008401) #15	ENSGEVG00005008432	WNT1 (ENSGEVG00005008476) #17	WNT10B (ENSGEVG00005008535) #18	ARF3 (ENSGEVG00005008644) #19	FKBP11 (ENSGEVG00005008664) #20	ENSGEVG00005008679 #21	ENSGEVG00005008701 #21	RND1 (ENSGEVG00005008717) #22	DDX23 (ENSGEVG00005008745) #23	CACNB3 (ENSGEVG00005008790) #24	ADCY6 (ENSGEVG00005008885) #25	CCNT1 (ENSGEVG00005008995) #28	KANSL2 (ENSGEVG00005009046) #29	TMBIM6 (ENSGEVG00005009215)	FMNL3 (ENSGEVG00005009313)	PRPF40B (ENSGEVG00005009586)	ENSGEVG00005009641	ATG101 (ENSGEVG00005009687)	NR4A1 (ENSGEVG00005000057)	TAMALIN (ENSGEVG00005000070)	ACVR1B (ENSGEVG00005000089)	ENSGEVG00005000122	ENSGEVG00005000139
Abingdon island giant tortoise	MODERN SPECIES	1111	ENSCABG00000007220	ENSCABG00000007222	ENSCABG00000007236	ENSCABG00000007237	ENSCABG00000007239 #10	DHH (ENSCABG00000007241) #11	RHEBL1 (ENSCABG00000007247) #12	PRKAG1 (ENSCABG00000007267) #15	DDN (ENSCABG00000007295) #16	WNT1 (ENSCABG00000007304) #17	WNT10B (ENSCABG00000007309) #18	ARF3 (ENSCABG00000007313) #19	FKBP11 (ENSCABG00000007317) #20	ENSCABG00000007319 #21	ENSCABG00000007322 #21	RND1 (ENSCABG00000007324) #22	DDX23 (ENSCABG00000007329) #23	CACNB3 (ENSCABG00000007333) #24	ADCY6 (ENSCABG00000007338) #25	CCNT1 (ENSCABG00000007341) #28	KANSL2 (ENSCABG00000007370) #29	NCKAP5L (ENSCABG00000007377)	TMBIM6 (ENSCABG00000007381)	FMNL3 (ENSCABG00000007437)	PRPF40B (ENSCABG00000008949)	ENSCABG00000008993	ATG101 (ENSCABG00000008994)	NR4A1 (ENSCABG00000008996)	TAMALIN (ENSCABG00000009000)	ACVR1B (ENSCABG00000009004)	ENSCABG00000009079
Emydidae	ANCESTRAL SPECIES	49	ENSGT00940000155969	ENSGT00940000160203 #8	ENSGT00940000154457.a.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00390000016495 #16	ENSGT00940000160329 #17	ENSGT00940000160653 #18	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B.h #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a.g #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00530000063607.a	ENSGT01050000244940.a.a	ENSGT00940000159962	ENSGT00930000150980.b	ENSGT00950000185385	ENSGT00390000016511	ENSGT00950000183038.a.b.a	ENSGT00530000063734.b	ENSGT00940000157032
Three-toed box turtle	MODERN SPECIES	255																RND1 (ENSTMTG00000009217) #22
painted turtle	MODERN SPECIES	871	ENSCPBG00000020020	PRPH (ENSCPBG00000020019) #8	ENSCPBG00000020017	ENSCPBG00000020016	ENSCPBG00000020015	LMBR1L (ENSCPBG00000020010) #10	DHH (ENSCPBG00000020008) #11	RHEBL1 (ENSCPBG00000020007) #12	PRKAG1 (ENSCPBG00000020003) #15	DDN (ENSCPBG00000020002) #16	WNT1 (ENSCPBG00000020000) #17	WNT10B (ENSCPBG00000019996) #18	ARF3 (ENSCPBG00000019994) #19	FKBP11 (ENSCPBG00000019993) #20	CCDC65 (ENSCPBG00000019991) #21	RND1 (ENSCPBG00000019989) #22	DDX23 (ENSCPBG00000019988) #23	CACNB3 (ENSCPBG00000019984) #24	ADCY6 (ENSCPBG00000019978) #25	TEX49 (ENSCPBG00000019976) #27	CCNT1 (ENSCPBG00000019975) #28	KANSL2 (ENSCPBG00000019969) #29	NCKAP5L (ENSCPBG00000019967)	TMBIM6 (ENSCPBG00000019962)	FMNL3 (ENSCPBG00000019686)	PRPF40B (ENSCPBG00000019498)	ENSCPBG00000019483	ATG101 (ENSCPBG00000019481)	NR4A1 (ENSCPBG00000019477)	TAMALIN (ENSCPBG00000019472)	ACVR1B (ENSCPBG00000019469)
Chinese turtle	MODERN SPECIES	1705	MCRS1 (ENSPSIG00000002974)	KCNH3 (ENSPSIG00000002968)	SPATS2 (ENSPSIG00000002965)	DNAJC22 (ENSPSIG00000002958)	PRPH (ENSPSIG00000002950) #8	ENSPSIG00000002936	TUBA1B (ENSPSIG00000002906)	LMBR1L (ENSPSIG00000002900) #10	DHH (ENSPSIG00000002888) #11	RHEBL1 (ENSPSIG00000002887) #12	WNT1 (ENSPSIG00000002885) #17	ENSPSIG00000002881 ##19	ENSPSIG00000002878	FKBP11 (ENSPSIG00000002874) #20	CCDC65 (ENSPSIG00000002864) #21	RND1 (ENSPSIG00000002860) #22	DDX23 (ENSPSIG00000002834) #23	CACNB3 (ENSPSIG00000002821) #24	ADCY6 (ENSPSIG00000002748) #25	TEX49 (ENSPSIG00000002744) #27	CCNT1 (ENSPSIG00000002720) #28	KANSL2 (ENSPSIG00000002709) #29	TMBIM6 (ENSPSIG00000002697)	ENSPSIG00000002684	ENSPSIG00000002673	ATG101 (ENSPSIG00000002653)	NR4A1 (ENSPSIG00000018018)	TAMALIN (ENSPSIG00000018003)	ACVR1B (ENSPSIG00000017901)	ENSPSIG00000017730	ANKRD33 (ENSPSIG00000017698)
Archosauria	ANCESTRAL SPECIES	32	ENSGT00940000155969	ENSGT00940000160203 #8	ENSGT00940000154457.a.a	ENSGT00950000182825.A.a.b.a.b.b	ENSGT00950000182825.A.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00940000160329 #17	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00390000010327 #27	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00530000063607.a	ENSGT01050000244940.a.a	ENSGT00940000159962	ENSGT00930000150980.b	ENSGT00950000185385	ENSGT00390000016511	ENSGT00950000183038.a.b.a	ENSGT00530000063734.b	ENSGT00940000157032
Australian saltwater crocodile	MODERN SPECIES	7													ARF3 (ENSCPRG00005001385) #19	FKBP11 (ENSCPRG00005001392) #20	CCDC65 (ENSCPRG00005001417) #21	RND1 (ENSCPRG00005001427) #22	DDX23 (ENSCPRG00005001479) #23	CACNB3 (ENSCPRG00005001571) #24	ADCY6 (ENSCPRG00005001591) #25	TEX49 (ENSCPRG00005001629) #27	CCNT1 (ENSCPRG00005001632) #28	KANSL2 (ENSCPRG00005001635) #29	NCKAP5L (ENSCPRG00005001644)	TMBIM6 (ENSCPRG00005001649)	FMNL3 (ENSCPRG00005001684)	PRPF40B (ENSCPRG00005001883)	ENSCPRG00005001953	ATG101 (ENSCPRG00005001955)	NR4A1 (ENSCPRG00005001958)	ACVR1B (ENSCPRG00005001974)	ENSCPRG00005001977
Aves	ANCESTRAL SPECIES	37	ENSGT00390000012136	ENSGT00940000155969	ENSGT00940000160203 #8	ENSGT00940000154457.a.a	ENSGT00950000182825.A.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00940000160329 #17	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00530000063607.a	ENSGT01050000244940.a.a	ENSGT00940000159962	ENSGT00390000016511	ENSGT00950000183038.a.b.a	ENSGT00530000063734.b	ENSGT00940000157032	ENSGT00940000164733	ENSGT00500000044852.b	ENSGT00940000161971
Neognathae	ANCESTRAL SPECIES	31	ENSGT00390000012136	ENSGT00940000155969	ENSGT00940000160203 #8	ENSGT00940000154457.a.a	ENSGT00950000182825.A.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00940000160329 #17	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00530000063607.a	ENSGT01050000244940.a.a	ENSGT00940000159962	ENSGT00390000016511	ENSGT00950000183038.a.b.a	ENSGT00530000063734.b	ENSGT00940000157032	ENSGT00940000164733	ENSGT00500000044852.b	ENSGT00940000161971
Galloanserae	ANCESTRAL SPECIES	37						ENSGT00950000182825.A.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00940000160329 #17	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT01050000244940.a.a	ENSGT00940000159962	ENSGT00390000016511	ENSGT00950000183038.a.b.a	ENSGT00530000063734.b	ENSGT00940000157032	ENSGT00940000164733	ENSGT00500000044852.b	ENSGT00940000161971	ENSGT00940000156263
Anatidae	ANCESTRAL SPECIES	104							ENSGT00940000154457.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00940000160329 #17	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24
Duck	MODERN SPECIES	872																RND1 (ENSAPLG00000003173) #22	DDX23 (ENSAPLG00000002868) #23
Pink-footed goose	MODERN SPECIES	523						LMBR1L (ENSABRG00000003807) #10	DHH (ENSABRG00000003824) #11	ENSABRG00000003832 #13	ENSABRG00000003842 #13	ENSABRG00000003854	PRKAG1 (ENSABRG00000003860) #15	WNT1 (ENSABRG00000003878) #17	ARF3 (ENSABRG00000003900) #19	CCDC65 (ENSABRG00000003962) #21	FKBP11 (ENSABRG00000004035) #20	RND1 (ENSABRG00000004045) #22	DDX23 (ENSABRG00000004061) #23	CACNB3 (ENSABRG00000004078) #24
Phasianidae	ANCESTRAL SPECIES																	ENSGT00940000158666 #22
Phasianidae_b	ANCESTRAL SPECIES	37											ENSGT00940000160329 #17	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000155606.b #23	ENSGT00940000158666 #22	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT01050000244940.a.a	ENSGT00940000159962	ENSGT00390000016511	ENSGT00950000183038.a.b.a	ENSGT00530000063734.b	ENSGT00940000157032	ENSGT00940000164733	ENSGT00500000044852.b	ENSGT00940000161971	ENSGT00940000156263	ENSGT00940000165418
Turkey	MODERN SPECIES	851																ENSMGAG00000019639 #22
Chicken	MODERN SPECIES	27											WNT1 (ENSGALG00010022557) #17	ARF3 (ENSGALG00010022565) #19	FKBP11 (ENSGALG00010022583) #20	CCDC65 (ENSGALG00010022592) #21	DDX23 (ENSGALG00010022712) #23	RND1 (ENSGALG00010022739) #22	CACNB3 (ENSGALG00010022767) #24	ADCY6 (ENSGALG00010022807) #25	CCNT1 (ENSGALG00010023074) #28	KANSL2 (ENSGALG00010023077) #29	ENSGALG00010023091	ENSGALG00010025425	ENSGALG00010025449	ATG101 (ENSGALG00010025496)	NR4A1 (ENSGALG00010025421)	TAMALIN (ENSGALG00010025405)	ACVR1B (ENSGALG00010022190)	ENSGALG00010022215	FIGNL2 (ENSGALG00010022248)	SCN8A (ENSGALG00010022264)	ENSGALG00010022277
Japanese quail	MODERN SPECIES	55															ENSCJPG00005003141	RND1 (ENSCJPG00005003138) #22	CCDC65 (ENSCJPG00005003137) #21	ENSCJPG00005003136	DDX23 (ENSCJPG00005002645) #23	ENSCJPG00005002614	ENSCJPG00005002610 #24	ADCY6 (ENSCJPG00005002528) #25	CCNT1 (ENSCJPG00005002526) #28	KANSL2 (ENSCJPG00005002509) #29
Neognathae_b	ANCESTRAL SPECIES	30	ENSGT00940000160203 #8	ENSGT00940000154457.a.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.b	ENSGT00940000154457.b.db.b	ENSGT00950000182825.A.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00940000160329 #17	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00530000063607.a	ENSGT01050000244940.a.a	ENSGT00940000159962	ENSGT00390000016511	ENSGT00950000183038.a.b.a	ENSGT00530000063734.b	ENSGT00940000157032	ENSGT00940000164733	ENSGT00500000044852.b	ENSGT00940000161971
Passeriformes	ANCESTRAL SPECIES	32		ENSGT00950000182825.A.a.b.a.a	ENSGT00950000182825.A.a.b.a.b.a.b	ENSGT00940000154457.b.db.b	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00940000160329 #17	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00530000063607.a	ENSGT01050000244940.a.a	ENSGT00940000159962	ENSGT00390000016511.i.a	ENSGT00950000183038.a.b.a	ENSGT00530000063734.b	ENSGT00940000157032	ENSGT00940000161446	ENSGT00500000044852.b	ENSGT01070000255642
Passeriformes_d	ANCESTRAL SPECIES	33	ENSGT00940000160065	ENSGT00940000160235	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.b	ENSGT00940000154457.b.db.b	ENSGT00950000182825.A.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00940000160329 #17	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00530000063607.a	ENSGT01050000244940.a.a	ENSGT00940000159962	ENSGT00390000016511.i.a	ENSGT00950000183038.a.b.a	ENSGT00530000063734.b	ENSGT00940000157032	ENSGT00940000161446	ENSGT00500000044852.b	ENSGT01070000255642
Passeriformes_g	ANCESTRAL SPECIES	32	ENSGT00940000160065	ENSGT00940000160235	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.b	ENSGT00940000154457.b.db.b	ENSGT00950000182825.A.a.b.a.b.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00940000160329 #17	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00530000063607.a	ENSGT01050000244940.a.a	ENSGT00940000159962	ENSGT00390000016511.i.b	ENSGT00950000183038.a.b.a	ENSGT00530000063734.b	ENSGT00940000157032	ENSGT00940000161446	ENSGT00500000044852.b	ENSGT01070000255642
Passeroidea	ANCESTRAL SPECIES	35	ENSGT00940000161040	ENSGT00950000183092.a	ENSGT00940000155609	ENSGT00940000160065	ENSGT00940000160235	ENSGT00940000160203 #8	ENSGT00950000182825.A.a.b.a.b.a.a.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00950000183019.f.b.a #15	ENSGT00940000160329 #17	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00530000063607.a	ENSGT01050000244940.a.a	ENSGT00940000159962	ENSGT00390000016511.i.b	ENSGT00950000183038.a.b.a	ENSGT00530000063734.b	ENSGT00940000157032	ENSGT00940000164733	ENSGT00500000044852.b	ENSGT01070000255642
Zebra finch	MODERN SPECIES	22	INHBC (ENSTGUG00000015903)	ENSTGUG00000027520	ENSTGUG00000024485	GLI1 (ENSTGUG00000025969)	PRPH (ENSTGUG00000023840) #8	ENSTGUG00000015913	TUBA1B (ENSTGUG00000010166)	LMBR1L (ENSTGUG00000017102) #10	DHH (ENSTGUG00000021456) #11	PRKAG1 (ENSTGUG00000020829) #15	ENSTGUG00000020585	WNT1 (ENSTGUG00000014931) #17	ARF3 (ENSTGUG00000029686) #19	FKBP11 (ENSTGUG00000015311) #20	CCDC65 (ENSTGUG00000025132) #21	RND1 (ENSTGUG00000028596) #22	DDX23 (ENSTGUG00000021965) #23	CACNB3 (ENSTGUG00000015546) #24	ADCY6 (ENSTGUG00000017455) #25	CCNT1 (ENSTGUG00000021992) #28	KANSL2 (ENSTGUG00000024698) #29	NCKAP5L (ENSTGUG00000024875)	TMBIM6 (ENSTGUG00000028099)	ATG101 (ENSTGUG00000016801)	ENSTGUG00000020476	ENSTGUG00000020834	ENSTGUG00000003248	ENSTGUG00000020607	ENSTGUG00000022242	ENSTGUG00000019149	ENSTGUG00000027188
Great tit	MODERN SPECIES	267	ENSPMJG00000005228	ENSPMJG00000005229	GLI1 (ENSPMJG00000005230)	ENSPMJG00000005236	ENSPMJG00000005238	ENSPMJG00000005240	LMBR1L (ENSPMJG00000005242) #10	DHH (ENSPMJG00000005247) #11	ENSPMJG00000005248 #13	ENSPMJG00000005252 #13	PRKAG1 (ENSPMJG00000005254) #15	WNT1 (ENSPMJG00000005255) #17	ARF3 (ENSPMJG00000005257) #19	FKBP11 (ENSPMJG00000005260) #20	CCDC65 (ENSPMJG00000005266) #21	RND1 (ENSPMJG00000005271) #22	DDX23 (ENSPMJG00000005273) #23	CACNB3 (ENSPMJG00000005343) #24	ADCY6 (ENSPMJG00000005352) #25	CCNT1 (ENSPMJG00000005360) #28	KANSL2 (ENSPMJG00000005369) #29	TMBIM6 (ENSPMJG00000005380)	FMNL3 (ENSPMJG00000005388)	ATG101 (ENSPMJG00000006492)	NR4A1 (ENSPMJG00000006494)	TAMALIN (ENSPMJG00000006496)	ACVR1B (ENSPMJG00000006497)	ENSPMJG00000006500	ENSPMJG00000006503	ENSPMJG00000006505	ENSPMJG00000006507
Neognathae_c	ANCESTRAL SPECIES	34	ENSGT00390000001138.a	ENSGT00390000012136	ENSGT00940000155969	ENSGT00940000160203 #8	ENSGT00940000154457.a.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00390000007809.a #10	ENSGT00940000161132 #11	ENSGT00940000161665 #12	ENSGT00940000156707 #13	ENSGT00950000183019.f.b.a #15	ENSGT00940000160329 #17	ENSGT00950000183080.a.a #19	ENSGT00940000159521 #20	ENSGT00940000153804.B #21	ENSGT00940000158666 #22	ENSGT00940000155606.b #23	ENSGT00950000182837.b.a #24	ENSGT00940000155687 #25	ENSGT00940000159544 #28	ENSGT00940000155808 #29	ENSGT00530000063607.a	ENSGT01050000244940.a.a	ENSGT00940000159962	ENSGT00390000016511	ENSGT00950000183038.a.b.a	ENSGT00530000063734.b	ENSGT00940000157032	ENSGT00940000164733	ENSGT00500000044852.b	ENSGT00940000161971
Kakapo	MODERN SPECIES	15	C1QL4 (ENSSHBG00005012859)	PRPH (ENSSHBG00005012882) #8	ENSSHBG00005012920	TUBA1B (ENSSHBG00005012958)	LMBR1L (ENSSHBG00005012994) #10	DHH (ENSSHBG00005013010) #11	RHEBL1 (ENSSHBG00005013025) #12	ENSSHBG00005013050 #13	ENSSHBG00005013072 #13	PRKAG1 (ENSSHBG00005013091) #15	ENSSHBG00005013112	WNT1 (ENSSHBG00005013129) #17	ARF3 (ENSSHBG00005013165) #19	FKBP11 (ENSSHBG00005001116) #20	CCDC65 (ENSSHBG00005001117) #21	RND1 (ENSSHBG00005012569) #22	DDX23 (ENSSHBG00005012584) #23	CACNB3 (ENSSHBG00005012618) #24	ADCY6 (ENSSHBG00005012650) #25	CCNT1 (ENSSHBG00005012675) #28	KANSL2 (ENSSHBG00005012692) #29	NCKAP5L (ENSSHBG00005012722)	ENSSHBG00005012748	FMNL3 (ENSSHBG00005012806)	ATG101 (ENSSHBG00005012893)	NR4A1 (ENSSHBG00005012908)	TAMALIN (ENSSHBG00005012950)	ACVR1B (ENSSHBG00005012990)	ENSSHBG00005013009	ENSSHBG00005013020	FIGNL2 (ENSSHBG00005013029)
Golden eagle	MODERN SPECIES	6	LETMD1 (ENSACCG00020007399)	SLC11A2 (ENSACCG00020007435)	ENSACCG00020007463	TSFM (ENSACCG00020007470)	EEF1AKMT3 (ENSACCG00020007481)	METTL1 (ENSACCG00020007492)	CYP27B1 (ENSACCG00020007564)	LMBR1L (ENSACCG00020007619) #10	DHH (ENSACCG00020007635) #11	RHEBL1 (ENSACCG00020007645) #12	PRKAG1 (ENSACCG00020007740) #15	WNT1 (ENSACCG00020007753) #17	ARF3 (ENSACCG00020007762) #19	FKBP11 (ENSACCG00020007773) #20	CCDC65 (ENSACCG00020007779) #21	RND1 (ENSACCG00020007790) #22	DDX23 (ENSACCG00020007807) #23	CACNB3 (ENSACCG00020007825) #24	ADCY6 (ENSACCG00020007847) #25	CCNT1 (ENSACCG00020007866) #28	KANSL2 (ENSACCG00020007889) #29	NCKAP5L (ENSACCG00020007924)	TMBIM6 (ENSACCG00020007934)	FMNL3 (ENSACCG00020008061)	ATG101 (ENSACCG00020008162)	NR4A1 (ENSACCG00020008170)	TAMALIN (ENSACCG00020008179)	ACVR1B (ENSACCG00020008193)	ENSACCG00020008217	ANKRD33 (ENSACCG00020008239)	FIGNL2 (ENSACCG00020008253)