Euteleostomi ANCESTRAL SPECIES 78 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00390000013973.B ENSGT00940000159761 ENSGT00390000000463 ENSGT00950000182933.B.b ENSGT00940000157338 ENSGT00390000006544 ENSGT00940000157228 ENSGT00940000156104.B ENSGT01050000244961.a.a.a ENSGT01050000244961.a.b ENSGT01050000244893.c.b.b ENSGT00390000007786.a ENSGT00940000167917 ENSGT00940000156686 ENSGT00940000153510.a Sarcopterygii ANCESTRAL SPECIES 24 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000154294 ENSGT00940000156498 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00390000013973.B ENSGT00940000159761 ENSGT00390000000463 ENSGT01070000253837 ENSGT00940000153759.a.b ENSGT00940000154705.A ENSGT00390000005412 ENSGT00940000155563 ENSGT01050000244891.E ENSGT00390000002361 ENSGT00940000154830 ENSGT00390000009760 ENSGT00940000160720 ENSGT00940000175870 ENSGT00940000163128.a Tetrapoda ANCESTRAL SPECIES 30 ENSGT00940000158604 ENSGT00940000160741 ENSGT00390000004832 ENSGT00940000156193 ENSGT00440000033742.a.b ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00390000013973.B ENSGT00940000159761 ENSGT00390000000463 ENSGT01070000253837 ENSGT00940000153759.a.b ENSGT00940000154705.A ENSGT00390000005412 ENSGT00940000155563 ENSGT01050000244891.F ENSGT00390000002361 ENSGT00940000154830 ENSGT00390000009760 ENSGT00940000160720 ENSGT00940000175870 ENSGT00940000163128.a Amniota ANCESTRAL SPECIES 14 ENSGT00940000158604 ENSGT00940000160741 ENSGT00390000004832 ENSGT00940000156193 ENSGT00440000033742.a.b ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00390000013973.B ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00940000156497 ENSGT01020000230794 ENSGT00940000156292 ENSGT00940000163949 ENSGT00390000002808.b ENSGT00390000002808.a ENSGT00940000160739 ENSGT00940000156993 ENSGT00390000017837.a ENSGT00550000075038 ENSGT00940000162478 Mammalia ANCESTRAL SPECIES 12 ENSGT00940000160741 ENSGT00390000004832 ENSGT00940000156193 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00940000156497 ENSGT01020000230794 ENSGT00940000156292 ENSGT00390000002808.b ENSGT00390000002808.a ENSGT00940000160739 ENSGT00940000156993 ENSGT00390000017837.a ENSGT00550000075038 ENSGT00940000162478 ENSGT00940000161200 ENSGT00940000159539 Theria ANCESTRAL SPECIES 25 ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 Eutheria ANCESTRAL SPECIES 4 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00740000117022 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 Boreoeutheria ANCESTRAL SPECIES 4 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00490000044407 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00740000117022 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01100000263482.F ENSGT01100000263482.A.a.a.c.a Laurasiatheria ANCESTRAL SPECIES 4 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00490000044407 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00740000117022 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01100000263482.F ENSGT01030000234760 Laurasiatheria_a ANCESTRAL SPECIES 4 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00490000044407 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00740000117022 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01030000234760 ENSGT00940000158479 Laurasiatheria_b ANCESTRAL SPECIES 4 ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00740000117022 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01030000234760 ENSGT00940000158479 Carnivora ANCESTRAL SPECIES 9 ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00740000117022 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01100000263482.F ENSGT01030000234760 ENSGT00940000158479 Caniformia ANCESTRAL SPECIES 6 ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00740000117022 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01100000263482.F ENSGT00940000158479 ENSGT00940000156339 Caniformia_b ANCESTRAL SPECIES 21 ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00740000117022 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01030000234760 ENSGT01100000263482.F ENSGT00940000158479 Ursidae ANCESTRAL SPECIES 18 ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01030000234760 ENSGT01100000263482.F ENSGT00940000158479 ENSGT00940000156339 Ursus ANCESTRAL SPECIES 8 ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00940000153112.E.f.b.c.b ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01030000234760 ENSGT00940000156339 ENSGT00390000012151 American black bear MODERN SPECIES 135 RHBDL3 (ENSUAMG00000002279) #20 C17orf75 (ENSUAMG00000002234) #21 ZNF207 (ENSUAMG00000002209) #22 Polar bear MODERN SPECIES 192 OMG (ENSUMAG00000015106) EVI2B (ENSUMAG00000015108) EVI2A (ENSUMAG00000015109) RAB11FIP4 (ENSUMAG00000015115) COPRS (ENSUMAG00000015132) UTP6 (ENSUMAG00000015139) SUZ12 (ENSUMAG00000015161) CRLF3 (ENSUMAG00000015224) ATAD5 (ENSUMAG00000015244) TEFM (ENSUMAG00000015276) ADAP2 (ENSUMAG00000015291) ENSUMAG00000015298 RHOT1 (ENSUMAG00000015308) RHBDL3 (ENSUMAG00000015318) #20 C17orf75 (ENSUMAG00000015332) #21 ZNF207 (ENSUMAG00000015371) #22 PSMD11 (ENSUMAG00000015400) CDK5R1 (ENSUMAG00000015534) MYO1D (ENSUMAG00000015550) ENSUMAG00000015571 TMEM98 (ENSUMAG00000015573) ENSUMAG00000015581 ASIC2 (ENSUMAG00000015591) ENSUMAG00000015601 CCL2 (ENSUMAG00000015604) CCL7 (ENSUMAG00000015608) CCL8 (ENSUMAG00000015612) CCL13 (ENSUMAG00000015615) ENSUMAG00000015623 CCT6B (ENSUMAG00000015641) ZNF830 (ENSUMAG00000015731) Giant Panda MODERN SPECIES 4 ENSAMEG00000005313 ENSAMEG00000019807 EVI2B (ENSAMEG00000019814) EVI2A (ENSAMEG00000005406) RAB11FIP4 (ENSAMEG00000005409) COPRS (ENSAMEG00000005439) UTP6 (ENSAMEG00000005443) ENSAMEG00000005490 ENSAMEG00000005514 ENSAMEG00000005534 TEFM (ENSAMEG00000005559) ENSAMEG00000005566 ENSAMEG00000005578 ENSAMEG00000005643 #20 C17orf75 (ENSAMEG00000005662) #21 ZNF207 (ENSAMEG00000005671) #22 PSMD11 (ENSAMEG00000005693) CDK5R1 (ENSAMEG00000019817) MYO1D (ENSAMEG00000005735) TMEM98 (ENSAMEG00000026035) SPACA3 (ENSAMEG00000005761) ASIC2 (ENSAMEG00000005774) ENSAMEG00000025929 CCL7 (ENSAMEG00000028962) CCL8 (ENSAMEG00000029965) CCL13 (ENSAMEG00000023685) CCL1 (ENSAMEG00000005795) TMEM132E (ENSAMEG00000014409) CCT6B (ENSAMEG00000014473) ZNF830 (ENSAMEG00000019495) LIG3 (ENSAMEG00000014509) Mustelinae ANCESTRAL SPECIES 2 ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00740000117022 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01100000263482.F ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 Ferret MODERN SPECIES 181 EVI2B (ENSMPUG00000019512) RAB11FIP4 (ENSMPUG00000014571) ENSMPUG00000014576 COPRS (ENSMPUG00000014579) UTP6 (ENSMPUG00000014581) ENSMPUG00000014639 SUZ12 (ENSMPUG00000014641) CRLF3 (ENSMPUG00000014670) ATAD5 (ENSMPUG00000014687) TEFM (ENSMPUG00000014690) ADAP2 (ENSMPUG00000014694) RNF135 (ENSMPUG00000014696) RHOT1 (ENSMPUG00000014703) RHBDL3 (ENSMPUG00000014711) #20 C17orf75 (ENSMPUG00000014757) #21 ZNF207 (ENSMPUG00000014761) #22 PSMD11 (ENSMPUG00000014767) CDK5R1 (ENSMPUG00000019514) MYO1D (ENSMPUG00000014772) ENSMPUG00000014779 TMEM98 (ENSMPUG00000014780) SPACA3 (ENSMPUG00000014796) ASIC2 (ENSMPUG00000014834) ENSMPUG00000014838 ENSMPUG00000014840 CCL2 (ENSMPUG00000014841) CCL7 (ENSMPUG00000014843) CCL8 (ENSMPUG00000014845) CCL13 (ENSMPUG00000014846) ENSMPUG00000014849 TMEM132E (ENSMPUG00000014852) American mink MODERN SPECIES 37 OMG (ENSNVIG00000018705) EVI2B (ENSNVIG00000018709) EVI2A (ENSNVIG00000018714) ENSNVIG00000018723 COPRS (ENSNVIG00000018741) UTP6 (ENSNVIG00000018745) SUZ12 (ENSNVIG00000018784) CRLF3 (ENSNVIG00000018811) ATAD5 (ENSNVIG00000018837) ENSNVIG00000018890 ADAP2 (ENSNVIG00000018896) ENSNVIG00000018939 RHOT1 (ENSNVIG00000018960) RHBDL3 (ENSNVIG00000019290) #20 NJMU (ENSNVIG00000019347) #21 ZNF207 (ENSNVIG00000019388) #22 PSMD11 (ENSNVIG00000019522) CD5R1 (ENSNVIG00000019539) MYO1D (ENSNVIG00000019549) TMM98 (ENSNVIG00000019571) SPACA3 (ENSNVIG00000019598) ASIC2 (ENSNVIG00000019610) CCL2 (ENSNVIG00000019643) ENSNVIG00000019653 CCL8 (ENSNVIG00000019665) CCL13 (ENSNVIG00000019676) CCL1 (ENSNVIG00000019684) TMEM132E (ENSNVIG00000019694) CCT6B (ENSNVIG00000019712) ZNF830 (ENSNVIG00000019817) LIG3 (ENSNVIG00000019831) Canidae ANCESTRAL SPECIES 2 ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449.a ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01100000263482.F ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 Red fox MODERN SPECIES 20 DKC1 (ENSVVUG00000020734) MPP1 (ENSVVUG00000020728) F8 (ENSVVUG00000020717) FUNDC2 (ENSVVUG00000020713) CMC4 (ENSVVUG00000020710) MTCP1 (ENSVVUG00000020711) ENSVVUG00000020709 ENSVVUG00000020707 ENSVVUG00000020703 ADAP2 (ENSVVUG00000020701) RNF135 (ENSVVUG00000020698) ENSVVUG00000020695 RHOT1 (ENSVVUG00000020640) RHBDL3 (ENSVVUG00000020629) #20 CUNH17orf75 (ENSVVUG00000020625) #21 ZNF207 (ENSVVUG00000020618) #22 PSMD11 (ENSVVUG00000020613) CDK5R1 (ENSVVUG00000020611) MYO1D (ENSVVUG00000020589) TMEM98 (ENSVVUG00000020587) SPACA3 (ENSVVUG00000020586) ASIC2 (ENSVVUG00000020562) ENSVVUG00000020545 CCL2 (ENSVVUG00000020543) CCL8 (ENSVVUG00000020542) ENSVVUG00000020541 CCL1 (ENSVVUG00000020540) TMEM132E (ENSVVUG00000020524) CCT6B (ENSVVUG00000020499) ZNF830 (ENSVVUG00000020495) LIG3 (ENSVVUG00000020483) Canis_lupus ANCESTRAL SPECIES 3 ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449.a ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01100000263482.F ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 Dingo DUPLICATION Dingo MODERN SPECIES 150 ENSCAFG00020014255 #21 ENSCAFG00020014254 #21 ENSCAFG00020014249 #22 PSMD11 (ENSCAFG00020014246) CDK5R1 (ENSCAFG00020014244) MYO1D (ENSCAFG00020014232) TMEM98 (ENSCAFG00020014224) ENSCAFG00020014220 ASIC2 (ENSCAFG00020014212) ENSCAFG00020014208 ENSCAFG00020014206 CCL7 (ENSCAFG00020014205) CCL8 (ENSCAFG00020014202) CCL13 (ENSCAFG00020014200) ENSCAFG00020014197 TMEM132E (ENSCAFG00020014170) ENSCAFG00020014164 ENSCAFG00020014162 Dingo MODERN SPECIES 327 ENSCAFG00020014662 RAB11FIP4 (ENSCAFG00020014665) ENSCAFG00020014676 UTP6 (ENSCAFG00020014678) SUZ12 (ENSCAFG00020014688) CRLF3 (ENSCAFG00020014745) ATAD5 (ENSCAFG00020014749) TEFM (ENSCAFG00020014756) ADAP2 (ENSCAFG00020014760) ENSCAFG00020014771 ENSCAFG00020014772 RHOT1 (ENSCAFG00020014790) RHBDL3 (ENSCAFG00020016379) #20 ENSCAFG00020016390 #21 ENSCAFG00020016393 #21 ENSCAFG00020016397 #22 Dog DUPLICATION Dog MODERN SPECIES 37 EVI2A (ENSCAFG00845014271) ENSCAFG00845014199 RAB11FIP4 (ENSCAFG00845014090) COPRS (ENSCAFG00845014015) UTP6 (ENSCAFG00845013931) SUZ12 (ENSCAFG00845013827) ENSCAFG00845013766 ATAD5 (ENSCAFG00845013608) TEFM (ENSCAFG00845013524) ADAP2 (ENSCAFG00845013471) RNF135 (ENSCAFG00845013351) ENSCAFG00845013335 RHOT1 (ENSCAFG00845012939) RHBDL3 (ENSCAFG00845012661) #20 C17orf75 (ENSCAFG00845012586) #21 ZNF207 (ENSCAFG00845012267) #22 PSMD11 (ENSCAFG00845012106) CDK5R1 (ENSCAFG00845012076) MYO1D (ENSCAFG00845011784) TMEM98 (ENSCAFG00845011666) SPACA3 (ENSCAFG00845011594) ASIC2 (ENSCAFG00845011475) CCL2 (ENSCAFG00845011375) CCL8 (ENSCAFG00845011338) CCL1 (ENSCAFG00845011240) CCL13 (ENSCAFG00845011162) TMEM132E (ENSCAFG00845011068) ENSCAFG00845011012 CCT6B (ENSCAFG00845010909) ZNF830 (ENSCAFG00845010855) LIG3 (ENSCAFG00845010737) Dog MODERN SPECIES 2 BTNL9 (ENSCAFG00845005351) OR2T26 (ENSCAFG00845005372) ENSCAFG00845005382 TRIM7 (ENSCAFG00845005395) TRIM41 (ENSCAFG00845005431) RACK1 (ENSCAFG00845005488) ENSCAFG00845005544 ENSCAFG00845005562 ENSCAFG00845005580 ENSCAFG00845005606 ENSCAFG00845005621 IFGGC1 (ENSCAFG00845005668) ENSCAFG00845005718 IFGGB2 (ENSCAFG00845005769) ENSCAFG00845005800 ENSCAFG00845005821 #22 ENSCAFG00845005841 ENSCAFG00845006015 CNOT6 (ENSCAFG00845006394) ENSCAFG00845006420 GFPT2 (ENSCAFG00845006488) MAPK9 (ENSCAFG00845006710) RASGEF1C (ENSCAFG00845006880) RNF130 (ENSCAFG00845007023) TBC1D9B (ENSCAFG00845007248) ENSCAFG00845007488 SQSTM1 (ENSCAFG00845007599) MGAT4B (ENSCAFG00845007711) LTC4S (ENSCAFG00845007863) MAML1 (ENSCAFG00845007951) CANX (ENSCAFG00845008030) Felidae ANCESTRAL SPECIES 8 ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01030000234760 ENSGT00940000158479.i ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 Cat MODERN SPECIES 245 OMG (ENSFCAG00000008854) EVI2B (ENSFCAG00000006064) EVI2A (ENSFCAG00000043747) RAB11FIP4 (ENSFCAG00000006068) COPRS (ENSFCAG00000015794) UTP6 (ENSFCAG00000015795) SUZ12 (ENSFCAG00000023797) CRLF3 (ENSFCAG00000025986) ATAD5 (ENSFCAG00000006895) TEFM (ENSFCAG00000022086) ADAP2 (ENSFCAG00000012459) ENSFCAG00000009132 RHOT1 (ENSFCAG00000015378) RHBDL3 (ENSFCAG00000015381) #20 CE1H17orf75 (ENSFCAG00000025653) #21 ZNF207 (ENSFCAG00000015387) #22 ENSFCAG00000028860 PSMD11 (ENSFCAG00000002060) CDK5R1 (ENSFCAG00000008545) MYO1D (ENSFCAG00000012420) TMEM98 (ENSFCAG00000000912) SPACA3 (ENSFCAG00000000913) ASIC2 (ENSFCAG00000018329) CCL2 (ENSFCAG00000038488) CCL7 (ENSFCAG00000045217) CCL8 (ENSFCAG00000013594) CCL13 (ENSFCAG00000026454) ENSFCAG00000032743 TMEM132E (ENSFCAG00000022991) CCT6B (ENSFCAG00000022789) LIG3 (ENSFCAG00000000249) Panthera ANCESTRAL SPECIES 14 ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01060000248892 ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01040000242096 ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01030000234760 ENSGT00940000158479.i ENSGT00940000156339 ENSGT00390000012151 Tiger MODERN SPECIES 76 EVI2B (ENSPTIG00000002057) EVI2A (ENSPTIG00000021682) NF1 (ENSPTIG00000019194) RAB11FIP4 (ENSPTIG00000016907) COPRS (ENSPTIG00000016317) UTP6 (ENSPTIG00000013913) SUZ12 (ENSPTIG00000010329) CRLF3 (ENSPTIG00000009626) ATAD5 (ENSPTIG00000006424) TEFM (ENSPTIG00000004505) ADAP2 (ENSPTIG00000021798) ENSPTIG00000021371 RHOT1 (ENSPTIG00000010535) RHBDL3 (ENSPTIG00000006273) #20 C17orf75 (ENSPTIG00000001419) #21 ZNF207 (ENSPTIG00000016631) #22 PSMD11 (ENSPTIG00000014305) CDK5R1 (ENSPTIG00000000341) MYO1D (ENSPTIG00000007889) TMEM98 (ENSPTIG00000004532) SPACA3 (ENSPTIG00000000021) ASIC2 (ENSPTIG00000021857) Panthera_a ANCESTRAL SPECIES 13 ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01060000248892 ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01040000242096 ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01030000234760 ENSGT00940000158479.i ENSGT00940000156339 ENSGT00390000012151 leopard MODERN SPECIES 96 EVI2B (ENSPPRG00000018243) EVI2A (ENSPPRG00000003824) RAB11FIP4 (ENSPPRG00000003276) COPRS (ENSPPRG00000001459) UTP6 (ENSPPRG00000001010) SUZ12 (ENSPPRG00000021306) CRLF3 (ENSPPRG00000020201) ATAD5 (ENSPPRG00000018417) TEFM (ENSPPRG00000015099) ADAP2 (ENSPPRG00000014777) ENSPPRG00000011923 RNF135 (ENSPPRG00000011481) RHOT1 (ENSPPRG00000010338) RHBDL3 (ENSPPRG00000006776) #20 C17orf75 (ENSPPRG00000002407) #21 ZNF207 (ENSPPRG00000001689) #22 PSMD11 (ENSPPRG00000023389) CDK5R1 (ENSPPRG00000017589) MYO1D (ENSPPRG00000024181) TMEM98 (ENSPPRG00000014217) SPACA3 (ENSPPRG00000013306) ASIC2 (ENSPPRG00000011981) ENSPPRG00000009983 ENSPPRG00000009828 CCL8 (ENSPPRG00000009741) CCL13 (ENSPPRG00000009433) ENSPPRG00000008979 TMEM132E (ENSPPRG00000008656) CCT6B (ENSPPRG00000007926) ZNF830 (ENSPPRG00000017044) LIG3 (ENSPPRG00000005157) lion MODERN SPECIES 14 OMG (ENSPLOG00000013157) EVI2B (ENSPLOG00000013180) EVI2A (ENSPLOG00000013199) RAB11FIP4 (ENSPLOG00000013242) COPRS (ENSPLOG00000013486) UTP6 (ENSPLOG00000013575) SUZ12 (ENSPLOG00000013650) CRLF3 (ENSPLOG00000013965) ATAD5 (ENSPLOG00000014072) TEFM (ENSPLOG00000014129) ADAP2 (ENSPLOG00000014207) ENSPLOG00000014267 RHOT1 (ENSPLOG00000014449) RHBDL3 (ENSPLOG00000014660) #20 C17orf75 (ENSPLOG00000014757) #21 ZNF207 (ENSPLOG00000014967) #22 ENSPLOG00000015470 PSMD11 (ENSPLOG00000015536) CDK5R1 (ENSPLOG00000015588) MYO1D (ENSPLOG00000015637) TMEM98 (ENSPLOG00000015789) SPACA3 (ENSPLOG00000015896) ASIC2 (ENSPLOG00000015956) ENSPLOG00000016136 CCL2 (ENSPLOG00000016154) ENSPLOG00000016184 CCL8 (ENSPLOG00000008313) CCL13 (ENSPLOG00000008357) ENSPLOG00000008391 TMEM132E (ENSPLOG00000008445) CCT6B (ENSPLOG00000008659) Laurasiatheria_c ANCESTRAL SPECIES 3 ENSGT00550000074797.b ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT00390000003008 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 Equus ANCESTRAL SPECIES ENSGT00550000074797.b ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 Horse MODERN SPECIES 2 KSR1 (ENSECAG00000019816) WSB1 (ENSECAG00000016726) EVI2B (ENSECAG00000004162) EVI2A (ENSECAG00000004031) NF1 (ENSECAG00000008317) RAB11FIP4 (ENSECAG00000006337) UTP6 (ENSECAG00000022217) SUZ12 (ENSECAG00000019997) CRLF3 (ENSECAG00000019822) ATAD5 (ENSECAG00000018443) TEFM (ENSECAG00000058199) ADAP2 (ENSECAG00000015333) RNF135 (ENSECAG00000014806) RHOT1 (ENSECAG00000009478) C11H17orf75 (ENSECAG00000001756) #21 ZNF207 (ENSECAG00000017464) #22 PSMD11 (ENSECAG00000014306) CDK5R1 (ENSECAG00000004006) MYO1D (ENSECAG00000009709) TMEM98 (ENSECAG00000007610) SPACA3 (ENSECAG00000005842) ASIC2 (ENSECAG00000000922) CCL8 (ENSECAG00000034282) ENSECAG00000036873 TMEM132E (ENSECAG00000023816) ZNF830 (ENSECAG00000003872) CCT6B (ENSECAG00000021342) LIG3 (ENSECAG00000016416) RFFL (ENSECAG00000015502) RAD51D (ENSECAG00000014139) FNDC8 (ENSECAG00000014023) Donkey MODERN SPECIES 4 ENSEASG00005010856 EVI2B (ENSEASG00005030701) EVI2A (ENSEASG00005010859) RAB11FIP4 (ENSEASG00005010862) UTP6 (ENSEASG00005010870) ENSEASG00005010872 ENSEASG00005010875 ENSEASG00005010880 TEFM (ENSEASG00005010887) ADAP2 (ENSEASG00005010891) ENSEASG00005029034 ENSEASG00005033664 ENSEASG00005010897 ENSEASG00005010901 #20 C17orf75 (ENSEASG00005010904) #21 ZNF207 (ENSEASG00005010907) #22 PSMD11 (ENSEASG00005010909) CDK5R1 (ENSEASG00005010912) MYO1D (ENSEASG00005010913) TMEM98 (ENSEASG00005010917) SPACA3 (ENSEASG00005010921) ASIC2 (ENSEASG00005010930) ENSEASG00005001865 ENSEASG00005035074 CCL2 (ENSEASG00005026206) CCL7 (ENSEASG00005028946) CCL11 (ENSEASG00005029284) CCL8 (ENSEASG00005028357) ENSEASG00005033288 ENSEASG00005036948 TMEM132E (ENSEASG00005010955) Chiroptera ANCESTRAL SPECIES 2 ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 Megabat MODERN SPECIES 3695 ZNF207 (ENSPVAG00000009766) #22 PSMD11 (ENSPVAG00000009767) Microchiroptera ANCESTRAL SPECIES ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 Microbat DUPLICATION Microbat MODERN SPECIES 1224 CA10 (ENSMLUG00000016229) ENSMLUG00000028702 RHOT1 (ENSMLUG00000012605) RHBDL3 (ENSMLUG00000007115) #20 C17orf75 (ENSMLUG00000007126) #21 ENSMLUG00000016085 #22 PSMD11 (ENSMLUG00000003874) CDK5R1 (ENSMLUG00000025930) MYO1D (ENSMLUG00000003887) ENSMLUG00000001191 SPACA3 (ENSMLUG00000001197) ASIC2 (ENSMLUG00000001207) Microbat MODERN SPECIES 949 PDHA2 (ENSMLUG00000014449) UNC5C (ENSMLUG00000009105) BMPR1B (ENSMLUG00000009090) PDLIM5 (ENSMLUG00000002083) HPGDS (ENSMLUG00000000432) SMARCAD1 (ENSMLUG00000000425) ATOH1 (ENSMLUG00000008044) GRID2 (ENSMLUG00000013810) ENSMLUG00000029344 #22 ENSMLUG00000028227 ENSMLUG00000023642 CCSER1 (ENSMLUG00000013655) MMRN1 (ENSMLUG00000000231) SNCA (ENSMLUG00000008577) ENSMLUG00000022411 FAM13A (ENSMLUG00000012281) NAP1L5 (ENSMLUG00000012266) HERC3 (ENSMLUG00000012241) ENSMLUG00000030473 PYURF (ENSMLUG00000030624) ENSMLUG00000023671 ENSMLUG00000012227 ENSMLUG00000027952 ENSMLUG00000026890 Greater horseshoe bat MODERN SPECIES 13 RAB11FIP4 (ENSRFEG00010017596) ENSRFEG00010017808 ENSRFEG00010017847 COPRS (ENSRFEG00010017903) UTP6 (ENSRFEG00010017972) SUZ12 (ENSRFEG00010018041) CRLF3 (ENSRFEG00010018133) ATAD5 (ENSRFEG00010018233) TEFM (ENSRFEG00010018619) ADAP2 (ENSRFEG00010018637) RNF135 (ENSRFEG00010018686) RHOT1 (ENSRFEG00010018815) RHBDL3 (ENSRFEG00010019014) #20 C17orf75 (ENSRFEG00010019104) #21 ENSRFEG00010019127 ZNF207 (ENSRFEG00010019158) #22 ENSRFEG00010019307 PSMD11 (ENSRFEG00010019338) CDK5R1 (ENSRFEG00010019423) MYO1D (ENSRFEG00010019451) ENSRFEG00010019534 TMEM98 (ENSRFEG00010019564) SPACA3 (ENSRFEG00010019589) ASIC2 (ENSRFEG00010019642) ENSRFEG00010019773 CCL2 (ENSRFEG00010019809) CCL8 (ENSRFEG00010019872) TMEM132E (ENSRFEG00010019902) CCT6B (ENSRFEG00010020082) ZNF830 (ENSRFEG00010020329) LIG3 (ENSRFEG00010020352) Artiodactyla ANCESTRAL SPECIES 4 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00490000044407 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 Suina ANCESTRAL SPECIES ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a Chacoan peccary MODERN SPECIES 144 C17orf75 (ENSCWAG00000013929) #21 ZNF207 (ENSCWAG00000013991) #22 PSMD11 (ENSCWAG00000014200) CDK5R1 (ENSCWAG00000014253) MYO1D (ENSCWAG00000014304) TMEM98 (ENSCWAG00000014817) SPACA3 (ENSCWAG00000014931) ASIC2 (ENSCWAG00000015037) CCL2 (ENSCWAG00000015205) CCL11 (ENSCWAG00000015240) CCL8 (ENSCWAG00000015268) ENSCWAG00000015299 TMEM132E (ENSCWAG00000015350) CCT6B (ENSCWAG00000015565) ZNF830 (ENSCWAG00000015919) LIG3 (ENSCWAG00000015948) RFFL (ENSCWAG00000016017) Pig MODERN SPECIES 3 EVI2B (ENSSSCG00000017750) EVI2A (ENSSSCG00000017749) NF1 (ENSSSCG00000017748) RAB11FIP4 (ENSSSCG00000017747) COPRS (ENSSSCG00000061452) UTP6 (ENSSSCG00000017745) SUZ12 (ENSSSCG00000017744) CRLF3 (ENSSSCG00000017743) ATAD5 (ENSSSCG00000035954) TEFM (ENSSSCG00000017741) ADAP2 (ENSSSCG00000017738) RNF135 (ENSSSCG00000017737) RHOT1 (ENSSSCG00000017735) RHBDL3 (ENSSSCG00000017734) #20 C17orf75 (ENSSSCG00000017733) #21 ZNF207 (ENSSSCG00000017732) #22 PSMD11 (ENSSSCG00000017731) CDK5R1 (ENSSSCG00000017730) MYO1D (ENSSSCG00000017728) TMEM98 (ENSSSCG00000017727) SPACA3 (ENSSSCG00000017726) ASIC2 (ENSSSCG00000040177) ENSSSCG00000058804 ENSSSCG00000034396 ENSSSCG00000031620 CCL2 (ENSSSCG00000017723) CCL11 (ENSSSCG00000044762) CCL8 (ENSSSCG00000040648) CCL1 (ENSSSCG00000017720) TMEM132E (ENSSSCG00000022987) CCT6B (ENSSSCG00000022196) Artiodactyla_a ANCESTRAL SPECIES 3 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00490000044407 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 Camelidae ANCESTRAL SPECIES 46 ENSGT00550000074797.b ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a Arabian camel DUPLICATION Arabian camel MODERN SPECIES 7 OMG (ENSCDRG00005016766) EVI2B (ENSCDRG00005016784) EVI2A (ENSCDRG00005016797) ENSCDRG00005016822 COPRS (ENSCDRG00005016899) UTP6 (ENSCDRG00005016986) SUZ12 (ENSCDRG00005017103) CRLF3 (ENSCDRG00005017225) ENSCDRG00005017338 ATAD5 (ENSCDRG00005017353) TEFM (ENSCDRG00005017496) ADAP2 (ENSCDRG00005017539) RHOT1 (ENSCDRG00005017659) RHBDL3 (ENSCDRG00005017971) #20 C17orf75 (ENSCDRG00005018024) #21 ENSCDRG00005018176 #22 PSMD11 (ENSCDRG00005018315) CDK5R1 (ENSCDRG00005018360) MYO1D (ENSCDRG00005018383) TMEM98 (ENSCDRG00005018566) ENSCDRG00005018607 ENSCDRG00005018651 ASIC2 (ENSCDRG00005018676) CCL2 (ENSCDRG00005018730) ENSCDRG00005018754 CCL8 (ENSCDRG00005018771) ENSCDRG00005018782 TMEM132E (ENSCDRG00005018809) CCT6B (ENSCDRG00005018987) ZNF830 (ENSCDRG00005019235) LIG3 (ENSCDRG00005019260) Arabian camel MODERN SPECIES 14 ENSCDRG00005014486 CLEC4G (ENSCDRG00005014424) ENSCDRG00005014380 EVI5L (ENSCDRG00005014180) PRR36 (ENSCDRG00005014132) LRRC8E (ENSCDRG00005014110) MAP2K7 (ENSCDRG00005013675) TGFBR3L (ENSCDRG00005013598) SNAPC2 (ENSCDRG00005013517) CTXN1 (ENSCDRG00005013495) TIMM44 (ENSCDRG00005013430) ELAVL1 (ENSCDRG00005013355) CCL25 (ENSCDRG00005013296) FBN3 (ENSCDRG00005011636) CERS4 (ENSCDRG00005011543) ENSCDRG00005011484 #22 CD320 (ENSCDRG00005011455) NDUFA7 (ENSCDRG00005011397) RPS28 (ENSCDRG00005011369) KANK3 (ENSCDRG00005011269) ANGPTL4 (ENSCDRG00005011142) RAB11B (ENSCDRG00005011000) MARCHF2 (ENSCDRG00005010915) HNRNPM (ENSCDRG00005010751) PRAM1 (ENSCDRG00005010701) ZNF414 (ENSCDRG00005010644) MYO1F (ENSCDRG00005008914) ADAMTS10 (ENSCDRG00005014083) ACTL9 (ENSCDRG00005014023) OR2Z1 (ENSCDRG00005013991) ZNF558 (ENSCDRG00005013914) Alpaca MODERN SPECIES 254 RHOT1 (ENSVPAG00000002513) ENSVPAG00000002517 #20 C17orf75 (ENSVPAG00000002519) #21 ZNF207 (ENSVPAG00000002521) #22 PSMD11 (ENSVPAG00000002523) MYO1D (ENSVPAG00000002525) TMEM98 (ENSVPAG00000002527) Artiodactyla_b ANCESTRAL SPECIES 3 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00490000044407 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 Cetacea ANCESTRAL SPECIES 5 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00490000044407 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01030000234760 ENSGT01100000263482.F ENSGT00940000158479 Blue whale MODERN SPECIES 12 OMG (ENSBMSG00010017364) EVI2B (ENSBMSG00010017353) EVI2A (ENSBMSG00010017340) NF1 (ENSBMSG00010016830) RAB11FIP4 (ENSBMSG00010016704) COPRS (ENSBMSG00010016604) UTP6 (ENSBMSG00010016566) SUZ12 (ENSBMSG00010016507) CRLF3 (ENSBMSG00010016451) ATAD5 (ENSBMSG00010016293) TEFM (ENSBMSG00010016257) ADAP2 (ENSBMSG00010016222) RHOT1 (ENSBMSG00010016141) RHBDL3 (ENSBMSG00010016026) #20 C17orf75 (ENSBMSG00010015998) #21 ZNF207 (ENSBMSG00010015813) #22 PSMD11 (ENSBMSG00010015716) CDK5R1 (ENSBMSG00010015699) MYO1D (ENSBMSG00010015533) TMEM98 (ENSBMSG00010015458) SPACA3 (ENSBMSG00010015398) ASIC2 (ENSBMSG00010015290) CCL2 (ENSBMSG00010015239) CCL7 (ENSBMSG00010015213) CCL11 (ENSBMSG00010015194) CCL8 (ENSBMSG00010015171) CCL1 (ENSBMSG00010015132) TMEM132E (ENSBMSG00010015019) ENSBMSG00010014985 ZNF830 (ENSBMSG00010014976) LIG3 (ENSBMSG00010014942) Odontoceti ANCESTRAL SPECIES 17 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00490000044407 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 Sperm whale MODERN SPECIES 12 STOX1 (ENSPCTG00005006234) CCAR1 (ENSPCTG00005005994) TET1 (ENSPCTG00005005923) DNA2 (ENSPCTG00005005526) HNRNPH3 (ENSPCTG00005005402) RUFY2 (ENSPCTG00005005150) PBLD (ENSPCTG00005005019) ATOH7 (ENSPCTG00005004994) MYPN (ENSPCTG00005004741) HERC4 (ENSPCTG00005004555) SIRT1 (ENSPCTG00005004488) DNAJC12 (ENSPCTG00005004448) ENSPCTG00005004399 LRRTM3 (ENSPCTG00005021822) CTNNA3 (ENSPCTG00005021800) ENSPCTG00005021784 #22 ENSPCTG00005021773 ENSPCTG00005021765 ENSPCTG00005021759 REEP3 (ENSPCTG00005021737) JMJD1C (ENSPCTG00005021543) NRBF2 (ENSPCTG00005021512) EGR2 (ENSPCTG00005021490) ADO (ENSPCTG00005021478) ZNF365 (ENSPCTG00005021453) RTKN2 (ENSPCTG00005021419) ARID5B (ENSPCTG00005021363) CABCOCO1 (ENSPCTG00005021317) TMEM26 (ENSPCTG00005021293) RHOBTB1 (ENSPCTG00005021266) CDK1 (ENSPCTG00005021227) Odontoceti_a ANCESTRAL SPECIES 18 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00490000044407 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01030000234760 ENSGT01100000263482.F ENSGT00940000158479 Dolphin MODERN SPECIES 6504 RHBDL3 (ENSTTRG00000011323) #20 C17orf75 (ENSTTRG00000011316) #21 ZNF207 (ENSTTRG00000011300) #22 Odontoceti_b ANCESTRAL SPECIES 20 ENSGT00550000074797.b ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01030000234760 ENSGT01100000263482.F ENSGT00940000158479 ENSGT01010000228931 Monodontidae ANCESTRAL SPECIES 21 ENSGT00550000074797.b ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01100000263482.F ENSGT00940000158479 ENSGT01010000228931 ENSGT00390000012151 Narwhal MODERN SPECIES 316 OMG (ENSMMNG00015020297) EVI2B (ENSMMNG00015020306) EVI2A (ENSMMNG00015020315) RAB11FIP4 (ENSMMNG00015020333) COPRS (ENSMMNG00015020405) UTP6 (ENSMMNG00015020445) SUZ12 (ENSMMNG00015020516) CRLF3 (ENSMMNG00015020564) ATAD5 (ENSMMNG00015020618) ENSMMNG00015020651 TEFM (ENSMMNG00015020658) ADAP2 (ENSMMNG00015020674) RHOT1 (ENSMMNG00015020743) RHBDL3 (ENSMMNG00015020871) #20 C17orf75 (ENSMMNG00015020915) #21 ZNF207 (ENSMMNG00015021000) #22 PSMD11 (ENSMMNG00015021150) CDK5R1 (ENSMMNG00015021171) MYO1D (ENSMMNG00015021191) TMEM98 (ENSMMNG00015021221) SPACA3 (ENSMMNG00015021243) ASIC2 (ENSMMNG00015021265) CCL2 (ENSMMNG00015021287) ENSMMNG00015021298 CCL11 (ENSMMNG00015021303) CCL8 (ENSMMNG00015021312) ENSMMNG00015021318 CCL1 (ENSMMNG00015021332) TMEM132E (ENSMMNG00015021348) ENSMMNG00015021366 ENSMMNG00015015650 Beluga whale MODERN SPECIES 43 EVI2A (ENSDLEG00000005770) NF1 (ENSDLEG00000004918) RAB11FIP4 (ENSDLEG00000004705) ENSDLEG00000004673 UTP6 (ENSDLEG00000004635) SUZ12 (ENSDLEG00000004558) ENSDLEG00000004529 CRLF3 (ENSDLEG00000004508) ENSDLEG00000004497 ATAD5 (ENSDLEG00000004353) TEFM (ENSDLEG00000004305) ADAP2 (ENSDLEG00000020513) RHOT1 (ENSDLEG00000019806) RHBDL3 (ENSDLEG00000019728) #20 C17orf75 (ENSDLEG00000019724) #21 ZNF207 (ENSDLEG00000019706) #22 PSMD11 (ENSDLEG00000019694) CDK5R1 (ENSDLEG00000019689) MYO1D (ENSDLEG00000019656) TMEM98 (ENSDLEG00000019652) SPACA3 (ENSDLEG00000019645) ASIC2 (ENSDLEG00000019639) ENSDLEG00000019633 CCL2 (ENSDLEG00000019628) CCL11 (ENSDLEG00000019618) ENSDLEG00000019603 ENSDLEG00000019587 ENSDLEG00000019583 SPEM2 (ENSDLEG00000019571) ENSDLEG00000019561 ENSDLEG00000019553 Vaquita DUPLICATION Vaquita MODERN SPECIES 7 CCAR1 (ENSPSNG00000018574) ENSPSNG00000018517 TET1 (ENSPSNG00000018401) DNA2 (ENSPSNG00000018291) RUFY2 (ENSPSNG00000018016) HNRNPH3 (ENSPSNG00000017903) PBLD (ENSPSNG00000017813) ATOH7 (ENSPSNG00000017790) MYPN (ENSPSNG00000017208) HERC4 (ENSPSNG00000016699) SIRT1 (ENSPSNG00000016409) ENSPSNG00000016344 DNAJC12 (ENSPSNG00000016132) LRRTM3 (ENSPSNG00000016050) CTNNA3 (ENSPSNG00000015816) ENSPSNG00000015753 #22 ENSPSNG00000015687 REEP3 (ENSPSNG00000015636) JMJD1C (ENSPSNG00000015259) NRBF2 (ENSPSNG00000015149) EGR2 (ENSPSNG00000015063) ADO (ENSPSNG00000015035) ZNF365 (ENSPSNG00000014971) RTKN2 (ENSPSNG00000014902) ARID5B (ENSPSNG00000014736) CABCOCO1 (ENSPSNG00000014615) TMEM26 (ENSPSNG00000014493) RHOBTB1 (ENSPSNG00000014292) CDK1 (ENSPSNG00000014155) ENSPSNG00000014083 ANK3 (ENSPSNG00000012368) Vaquita MODERN SPECIES 12 EVI2B (ENSPSNG00000021314) EVI2A (ENSPSNG00000021323) RAB11FIP4 (ENSPSNG00000021351) COPRS (ENSPSNG00000021477) UTP6 (ENSPSNG00000021544) SUZ12 (ENSPSNG00000021611) CRLF3 (ENSPSNG00000021636) ENSPSNG00000021650 ATAD5 (ENSPSNG00000021738) ENSPSNG00000022012 TEFM (ENSPSNG00000022020) ADAP2 (ENSPSNG00000022035) RHOT1 (ENSPSNG00000022092) RHBDL3 (ENSPSNG00000022156) #20 C17orf75 (ENSPSNG00000022179) #21 ZNF207 (ENSPSNG00000022235) #22 PSMD11 (ENSPSNG00000022276) MYO1D (ENSPSNG00000022301) TMEM98 (ENSPSNG00000022321) SPACA3 (ENSPSNG00000022329) ASIC2 (ENSPSNG00000022343) CCL2 (ENSPSNG00000022350) ENSPSNG00000022355 ENSPSNG00000022365 ENSPSNG00000022368 ENSPSNG00000022370 ENSPSNG00000009585 ENSPSNG00000009606 ENSPSNG00000009692 ENSPSNG00000009744 ENSPSNG00000009891 Pecora ANCESTRAL SPECIES 1 ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 Yarkand deer MODERN SPECIES 28 EVI2B (ENSCHYG00000007832) EVI2A (ENSCHYG00000007807) NF1 (ENSCHYG00000007674) RAB11FIP4 (ENSCHYG00000007539) ENSCHYG00000007474 COPRS (ENSCHYG00000007434) ENSCHYG00000007381 SUZ12 (ENSCHYG00000006992) CRLF3 (ENSCHYG00000006890) ATAD5 (ENSCHYG00000006843) TEFM (ENSCHYG00000006805) RNF135 (ENSCHYG00000006620) RHOT1 (ENSCHYG00000006284) RHBDL3 (ENSCHYG00000006168) #20 C17orf75 (ENSCHYG00000006089) #21 ZNF207 (ENSCHYG00000005793) #22 PSMD11 (ENSCHYG00000005685) CDK5R1 (ENSCHYG00000005666) MYO1D (ENSCHYG00000005522) TMEM98 (ENSCHYG00000005448) SPACA3 (ENSCHYG00000005400) ENSCHYG00000005385 ENSCHYG00000005365 ASIC2 (ENSCHYG00000005233) CCL2 (ENSCHYG00000004987) CCL11 (ENSCHYG00000004959) ENSCHYG00000004663 ENSCHYG00000004652 TMEM132E (ENSCHYG00000004615) CCT6B (ENSCHYG00000004528) ZNF830 (ENSCHYG00000004488) Percora_a ANCESTRAL SPECIES 2 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00390000010799.u.a.j ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 Siberian musk deer MODERN SPECIES 1135 EVI2A (ENSMMSG00000005424) NF1 (ENSMMSG00000004739) RAB11FIP4 (ENSMMSG00000014971) COPRS (ENSMMSG00000014900) ENSMMSG00000014848 SUZ12 (ENSMMSG00000014732) ENSMMSG00000014703 CRLF3 (ENSMMSG00000014680) ATAD5 (ENSMMSG00000014589) TEFM (ENSMMSG00000014559) ADAP2 (ENSMMSG00000014535) RNF135 (ENSMMSG00000014522) RHOT1 (ENSMMSG00000014399) RHBDL3 (ENSMMSG00000014303) #20 C17orf75 (ENSMMSG00000014275) #21 ZNF207 (ENSMMSG00000014169) #22 PSMD11 (ENSMMSG00000014125) CDK5R1 (ENSMMSG00000014112) MYO1D (ENSMMSG00000014045) TMEM98 (ENSMMSG00000013992) SPACA3 (ENSMMSG00000013944) ASIC2 (ENSMMSG00000013849) CCL2 (ENSMMSG00000013816) CCL11 (ENSMMSG00000013803) CCL8 (ENSMMSG00000013783) CCL1 (ENSMMSG00000013764) ENSMMSG00000013748 TMEM132E (ENSMMSG00000013674) CCT6B (ENSMMSG00000013474) ZNF830 (ENSMMSG00000013439) LIG3 (ENSMMSG00000013344) Bovidae ANCESTRAL SPECIES 2 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493.i ENSGT00390000012364 ENSGT00390000010799.u.a.j ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 Caprinae ANCESTRAL SPECIES 1 ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493.i ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 Rambouillet Sheep MODERN SPECIES 2 EVI2B (ENSOARG00020010685) EVI2A (ENSOARG00020010709) RAB11FIP4 (ENSOARG00020010743) ENSOARG00020011158 ENSOARG00020011224 UTP6 (ENSOARG00020011367) SUZ12 (ENSOARG00020011487) CRLF3 (ENSOARG00020011795) ENSOARG00020011916 TEFM (ENSOARG00020011981) ADAP2 (ENSOARG00020012053) RNF135 (ENSOARG00020012111) RHOT1 (ENSOARG00020012187) RHBDL3 (ENSOARG00020012523) #20 C17orf75 (ENSOARG00020012947) #21 ZNF207 (ENSOARG00020013074) #22 PSMD11 (ENSOARG00020013882) CDK5R1 (ENSOARG00020014060) MYO1D (ENSOARG00020014169) RPS26 (ENSOARG00020016985) TMEM98 (ENSOARG00020017022) SPACA3 (ENSOARG00020017184) ASIC2 (ENSOARG00020017317) CCL2 (ENSOARG00020017573) CCL11 (ENSOARG00020017624) CCL8 (ENSOARG00020017661) CCL1 (ENSOARG00020017691) TMEM132E (ENSOARG00020017730) CCT6B (ENSOARG00020018028) ZNF830 (ENSOARG00020018540) LIG3 (ENSOARG00020018561) Goat MODERN SPECIES 10 EVI2A (ENSCHIG00000025780) NF1 (ENSCHIG00000010629) RAB11FIP4 (ENSCHIG00000019966) ENSCHIG00000012864 COPRS (ENSCHIG00000018532) ENSCHIG00000017954 SUZ12 (ENSCHIG00000026246) CRLF3 (ENSCHIG00000021351) ATAD5 (ENSCHIG00000016940) TEFM (ENSCHIG00000024685) ADAP2 (ENSCHIG00000011945) RNF135 (ENSCHIG00000022049) RHOT1 (ENSCHIG00000015707) RHBDL3 (ENSCHIG00000025504) #20 C17orf75 (ENSCHIG00000024915) #21 ZNF207 (ENSCHIG00000013026) #22 PSMD11 (ENSCHIG00000008139) CDK5R1 (ENSCHIG00000004376) MYO1D (ENSCHIG00000014922) TMEM98 (ENSCHIG00000027044) SPACA3 (ENSCHIG00000014732) ASIC2 (ENSCHIG00000026032) ENSCHIG00000014289 CCL2 (ENSCHIG00000023567) CCL11 (ENSCHIG00000012968) CCL8 (ENSCHIG00000020074) ENSCHIG00000002408 TMEM132E (ENSCHIG00000015468) CCT6B (ENSCHIG00000023739) ZNF830 (ENSCHIG00000012740) LIG3 (ENSCHIG00000023884) Bovinae ANCESTRAL SPECIES ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493.i ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00390000010799.u.a.j ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a American bison MODERN SPECIES 3331 EVI2A (ENSBBBG00000016984) RAB11FIP4 (ENSBBBG00000016968) ENSBBBG00000016891 COPRS (ENSBBBG00000016861) ENSBBBG00000004167 SUZ12 (ENSBBBG00000004153) CRLF3 (ENSBBBG00000007423) ENSBBBG00000016709 ATAD5 (ENSBBBG00000016688) TEFM (ENSBBBG00000016527) ADAP2 (ENSBBBG00000016491) RNF135 (ENSBBBG00000008504) RHOT1 (ENSBBBG00000004063) RHBDL3 (ENSBBBG00000016033) #20 C17orf75 (ENSBBBG00000016016) #21 ZNF207 (ENSBBBG00000003982) #22 PSMD11 (ENSBBBG00000015842) CDK5R1 (ENSBBBG00000015765) MYO1D (ENSBBBG00000015737) TMEM98 (ENSBBBG00000015612) SPACA3 (ENSBBBG00000003890) ASIC2 (ENSBBBG00000000789) CCL2 (ENSBBBG00000015537) CCL11 (ENSBBBG00000015529) ENSBBBG00000015515 TMEM132E (ENSBBBG00000003856) CCT6B (ENSBBBG00000015432) ZNF830 (ENSBBBG00000003814) LIG3 (ENSBBBG00000003485) RFFL (ENSBBBG00000001330) RAD51D (ENSBBBG00000015308) Bos ANCESTRAL SPECIES 1 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493.i ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00390000010799.u.a.j ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a Bos_a ANCESTRAL SPECIES ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493.i ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00390000010799.u.a.j ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a Wild yak MODERN SPECIES 829 EVI2B (ENSBMUG00000011238) EVI2A (ENSBMUG00000011235) NF1 (ENSBMUG00000011111) RAB11FIP4 (ENSBMUG00000010684) COPRS (ENSBMUG00000010623) UTP6 (ENSBMUG00000010588) SUZ12 (ENSBMUG00000010551) ENSBMUG00000010522 ATAD5 (ENSBMUG00000010450) TEFM (ENSBMUG00000010384) ADAP2 (ENSBMUG00000010349) ENSBMUG00000010324 RHOT1 (ENSBMUG00000010283) RHBDL3 (ENSBMUG00000010162) #20 ENSBMUG00000010140 #21 ZNF207 (ENSBMUG00000010122) #22 PSMD11 (ENSBMUG00000010031) CDK5R1 (ENSBMUG00000010012) MYO1D (ENSBMUG00000009987) TMEM98 (ENSBMUG00000009909) SPACA3 (ENSBMUG00000009900) ASIC2 (ENSBMUG00000009872) Domestic yak MODERN SPECIES 10 OMG (ENSBGRG00000015564) EVI2B (ENSBGRG00000015582) EVI2A (ENSBGRG00000015599) RAB11FIP4 (ENSBGRG00000015654) UTP6 (ENSBGRG00000016004) SUZ12 (ENSBGRG00000016989) CRLF3 (ENSBGRG00000017273) ENSBGRG00000017421 ATAD5 (ENSBGRG00000017486) TEFM (ENSBGRG00000018181) ADAP2 (ENSBGRG00000018321) RNF135 (ENSBGRG00000018378) RHOT1 (ENSBGRG00000018417) RHBDL3 (ENSBGRG00000018758) #20 C17orf75 (ENSBGRG00000018880) #21 ZNF207 (ENSBGRG00000018994) #22 ENSBGRG00000019374 PSMD11 (ENSBGRG00000019390) CDK5R1 (ENSBGRG00000019524) MYO1D (ENSBGRG00000019568) TMEM98 (ENSBGRG00000019780) ENSBGRG00000019895 ASIC2 (ENSBGRG00000019964) ENSBGRG00000020251 CCL11 (ENSBGRG00000020299) ENSBGRG00000020373 ENSBGRG00000020420 TMEM132E (ENSBGRG00000020451) CCT6B (ENSBGRG00000020692) ZNF830 (ENSBGRG00000021136) LIG3 (ENSBGRG00000021180) Bos_b ANCESTRAL SPECIES 38 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493.i ENSGT00390000012364 ENSGT00390000010799.u.a.j ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a Cow MODERN SPECIES 10 ENSBTAG00000050242 RAB11FIP4 (ENSBTAG00000016972) COPRS (ENSBTAG00000049483) UTP6 (ENSBTAG00000015612) SUZ12 (ENSBTAG00000018752) ENSBTAG00000025202 CRLF3 (ENSBTAG00000018381) ATAD5 (ENSBTAG00000018383) ENSBTAG00000051813 TEFM (ENSBTAG00000018386) ADAP2 (ENSBTAG00000003334) RNF135 (ENSBTAG00000017225) RHOT1 (ENSBTAG00000010001) RHBDL3 (ENSBTAG00000020992) #20 C19H17orf75 (ENSBTAG00000020994) #21 ZNF207 (ENSBTAG00000008883) #22 PSMD11 (ENSBTAG00000018897) CDK5R1 (ENSBTAG00000004475) MYO1D (ENSBTAG00000015527) TMEM98 (ENSBTAG00000008913) SPACA3 (ENSBTAG00000000344) ASIC2 (ENSBTAG00000025200) CCL2 (ENSBTAG00000037811) CCL11 (ENSBTAG00000004129) CCL8 (ENSBTAG00000014113) CCL1 (ENSBTAG00000008832) TMEM132E (ENSBTAG00000002680) CCT6B (ENSBTAG00000020338) ZNF830 (ENSBTAG00000020340) LIG3 (ENSBTAG00000018689) RFFL (ENSBTAG00000013645) Hybrid Bos Indicus MODERN SPECIES 10 OMG (ENSBIXG00005002940) EVI2B (ENSBIXG00005018145) EVI2A (ENSBIXG00005018153) NF1 (ENSBIXG00005018607) RAB11FIP4 (ENSBIXG00005018731) COPRS (ENSBIXG00005018823) UTP6 (ENSBIXG00005018868) SUZ12 (ENSBIXG00005000054) CRLF3 (ENSBIXG00005003096) ATAD5 (ENSBIXG00005002643) TEFM (ENSBIXG00005019077) ADAP2 (ENSBIXG00005006808) RNF135 (ENSBIXG00005019124) RHOT1 (ENSBIXG00005019289) C17orf75 (ENSBIXG00005006030) #21 ZNF207 (ENSBIXG00005019493) #22 ENSBIXG00005019526 PSMD11 (ENSBIXG00005019559) CDK5R1 (ENSBIXG00005019571) MYO1D (ENSBIXG00005019665) TMEM98 (ENSBIXG00005019737) ENSBIXG00005019792 ASIC2 (ENSBIXG00005006881) CCL2 (ENSBIXG00005006654) CCL11 (ENSBIXG00005003267) ENSBIXG00005019984 ENSBIXG00005003275 TMEM132E (ENSBIXG00005003295) CCT6B (ENSBIXG00005020356) ZNF830 (ENSBIXG00005000019) LIG3 (ENSBIXG00005020425) Eulipotyphla ANCESTRAL SPECIES ENSGT00730000111057 #22 Common shrew MODERN SPECIES 135 ZNF207 (ENSSARG00000003126) #22 Hedgehog MODERN SPECIES 12374 ZNF207 (ENSEEUG00000001574) #22 Euarchontoglires ANCESTRAL SPECIES 4 ENSGT00440000033742.a.b ENSGT01000000215472 ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00490000044407 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00740000117022 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01100000263482.F ENSGT01060000248892 ENSGT01100000263482.A.a.a.d.a.a.b Euarchontoglires_A ANCESTRAL SPECIES 4 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT01000000215472 ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.c.a ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 Tree shrew MODERN SPECIES 3852 RHOT1 (ENSTBEG00000004348) RHBDL3 (ENSTBEG00000005029) #20 C17orf75 (ENSTBEG00000005744) #21 ENSTBEG00000007127 #22 Glires ANCESTRAL SPECIES 3 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT01000000215472 ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.c.a ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 Lagomorpha ANCESTRAL SPECIES ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.c.a ENSGT01100000263482.F ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 Rabbit MODERN SPECIES 10 OMG (ENSOCUG00000008593) EVI2B (ENSOCUG00000008595) EVI2A (ENSOCUG00000008603) RAB11FIP4 (ENSOCUG00000007443) COPRS (ENSOCUG00000015488) UTP6 (ENSOCUG00000016980) SUZ12 (ENSOCUG00000002536) CRLF3 (ENSOCUG00000002764) ATAD5 (ENSOCUG00000015229) TEFM (ENSOCUG00000015262) ADAP2 (ENSOCUG00000015269) ENSOCUG00000008741 RHOT1 (ENSOCUG00000012506) RHBDL3 (ENSOCUG00000008179) #20 C17orf75 (ENSOCUG00000008187) #21 ZNF207 (ENSOCUG00000008195) #22 PSMD11 (ENSOCUG00000008495) MYO1D (ENSOCUG00000008513) TMEM98 (ENSOCUG00000009595) SPACA3 (ENSOCUG00000010792) ASIC2 (ENSOCUG00000013626) ENSOCUG00000025296 CCL2 (ENSOCUG00000021710) ENSOCUG00000034927 CCL11 (ENSOCUG00000005935) ENSOCUG00000030195 ENSOCUG00000013412 ENSOCUG00000013416 TMEM132E (ENSOCUG00000012159) CCT6B (ENSOCUG00000012343) ZNF830 (ENSOCUG00000012351) Pika MODERN SPECIES 4736 ENSOPRG00000014844 RHOT1 (ENSOPRG00000014856) RHBDL3 (ENSOPRG00000014911) #20 C17orf75 (ENSOPRG00000014924) #21 ENSOPRG00000014950 #22 Rodentia ANCESTRAL SPECIES 4 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT01000000215472 ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.c.a ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 Rodentia_B ANCESTRAL SPECIES 1 ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00550000074797.b ENSGT00440000033742.a.b ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b.d ENSGT01100000263482.A.a.a.c.a ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 Myomorpha ANCESTRAL SPECIES ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00550000074797.b ENSGT00440000033742.a.b ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a.b ENSGT01100000263482.A.a.a.c.a ENSGT01100000263482.F ENSGT01100000263482.A.a.a.d.a.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b.d ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 Muroidea ANCESTRAL SPECIES ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00550000074797.b ENSGT00440000033742.a.b ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.b.d ENSGT01100000263482.A.a.a.d.a.a.a.a.a ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 Muroidea_A ANCESTRAL SPECIES 1 ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00550000074797.b ENSGT00440000033742.a.b ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a.b ENSGT01100000263482.A.a.a.c.b ENSGT01100000263482.A.a.a.d.a.a.a.a.a ENSGT01100000263482.A.a.a.c.a ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 Cricetidae ANCESTRAL SPECIES ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00550000074797.b ENSGT00440000033742.a.b ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a.b ENSGT01100000263482.A.a.a.c.b ENSGT01100000263482.A.a.a.d.a.a.a.a.a ENSGT01100000263482.A.a.a.c.a ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 Cricetidae_B ANCESTRAL SPECIES ENSGT00550000074797.b ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a.b ENSGT01100000263482.A.a.a.c.b ENSGT01100000263482.A.a.a.d.a.a.a.a.a ENSGT01100000263482.A.a.a.c.a ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 Northern American deer mouse MODERN SPECIES 21 Omg (ENSPEMG00000012789) Evi2b (ENSPEMG00000011425) Evi2a (ENSPEMG00000009997) Rab11fip4 (ENSPEMG00000017840) Utp6 (ENSPEMG00000014081) Suz12 (ENSPEMG00000019235) Crlf3 (ENSPEMG00000018811) Atad5 (ENSPEMG00000012850) Tefm (ENSPEMG00000016212) Adap2 (ENSPEMG00000002187) ENSPEMG00000018511 Rhot1 (ENSPEMG00000015998) Rhbdl3 (ENSPEMG00000017609) #20 5730455P16Rik (ENSPEMG00000007661) #21 ENSPEMG00000031231 Zfp207 (ENSPEMG00000009110) #22 Psmd11 (ENSPEMG00000015029) Cdk5r1 (ENSPEMG00000004672) Myo1d (ENSPEMG00000021437) Tmem98 (ENSPEMG00000015639) Spaca3 (ENSPEMG00000008847) Asic2 (ENSPEMG00000022612) ENSPEMG00000021078 Ccl2 (ENSPEMG00000024087) Ccl7 (ENSPEMG00000022329) Ccl11 (ENSPEMG00000031393) Ccl12 (ENSPEMG00000018710) Ccl8 (ENSPEMG00000024303) ENSPEMG00000022558 Tmem132e (ENSPEMG00000016046) Cct6b (ENSPEMG00000022000) Prairie vole MODERN SPECIES 15 Omg (ENSMOCG00000008768) Evi2b (ENSMOCG00000017970) Evi2a (ENSMOCG00000003867) Nf1 (ENSMOCG00000013672) Rab11fip4 (ENSMOCG00000016866) Utp6 (ENSMOCG00000014163) Suz12 (ENSMOCG00000019023) Crlf3 (ENSMOCG00000012869) Atad5 (ENSMOCG00000003812) Tefm (ENSMOCG00000000789) Adap2 (ENSMOCG00000012833) ENSMOCG00000008236 Rhot1 (ENSMOCG00000018397) Rhbdl3 (ENSMOCG00000018973) #20 5730455P16Rik (ENSMOCG00000020781) #21 Zfp207 (ENSMOCG00000017262) #22 ENSMOCG00000010820 ENSMOCG00000012529 Cdk5r1 (ENSMOCG00000001690) Myo1d (ENSMOCG00000018702) Tmem98 (ENSMOCG00000019650) Spaca3 (ENSMOCG00000019356) Asic2 (ENSMOCG00000011922) Ccl2 (ENSMOCG00000017496) Ccl7 (ENSMOCG00000014487) Ccl11 (ENSMOCG00000003156) Ccl12 (ENSMOCG00000009094) Ccl8 (ENSMOCG00000006845) Ccl1 (ENSMOCG00000005819) Tmem132e (ENSMOCG00000017883) Cct6b (ENSMOCG00000015382) Cricetinae ANCESTRAL SPECIES ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00550000074797.b ENSGT00440000033742.a.b ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a.b ENSGT01100000263482.A.a.a.c.b ENSGT01100000263482.A.a.a.d.a.a.a.a.a ENSGT01100000263482.A.a.a.c.a ENSGT01100000263482.F ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 Chinese hamster chok1gshd MODERN SPECIES 374 Omg (ENSCGRG00001003552) Evi2b (ENSCGRG00001002438) Evi2a (ENSCGRG00001001421) Nf1 (ENSCGRG00001015811) Rab11fip4 (ENSCGRG00001011772) Utp6 (ENSCGRG00001000046) Suz12 (ENSCGRG00001012460) ENSCGRG00001008689 Atad5 (ENSCGRG00001015531) Tefm (ENSCGRG00001014415) Adap2 (ENSCGRG00001013794) ENSCGRG00001013219 Rhot1 (ENSCGRG00001018128) Rhbdl3 (ENSCGRG00001011616) #20 5730455P16Rik (ENSCGRG00001011069) #21 Zfp207 (ENSCGRG00001018133) #22 Psmd11 (ENSCGRG00001014740) Cdk5r1 (ENSCGRG00001014057) Myo1d (ENSCGRG00001020403) Golden Hamster MODERN SPECIES 684 Omg (ENSMAUG00000000920) Evi2b (ENSMAUG00000021786) Evi2a (ENSMAUG00000011179) Nf1 (ENSMAUG00000021534) Rab11fip4 (ENSMAUG00000012204) Utp6 (ENSMAUG00000021895) Suz12 (ENSMAUG00000001677) Crlf3 (ENSMAUG00000001238) Atad5 (ENSMAUG00000019548) Tefm (ENSMAUG00000006565) Adap2 (ENSMAUG00000001797) ENSMAUG00000022173 Rhot1 (ENSMAUG00000021776) Rhbdl3 (ENSMAUG00000020013) #20 5730455P16Rik (ENSMAUG00000007002) #21 Zfp207 (ENSMAUG00000008892) #22 Psmd11 (ENSMAUG00000019073) Cdk5r1 (ENSMAUG00000021140) ENSMAUG00000009545 Myo1d (ENSMAUG00000013009) Tmem98 (ENSMAUG00000012837) Spaca3 (ENSMAUG00000018445) Asic2 (ENSMAUG00000010967) Ccl2 (ENSMAUG00000020623) ENSMAUG00000012536 Ccl7 (ENSMAUG00000011314) Ccl11 (ENSMAUG00000015725) Ccl12 (ENSMAUG00000013327) Ccl8 (ENSMAUG00000018176) ENSMAUG00000013646 Tmem132e (ENSMAUG00000016009) Murinae ANCESTRAL SPECIES 6 ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00550000074797.b ENSGT00440000033742.a.b ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a.b ENSGT01100000263482.A.a.a.c.b ENSGT01100000263482.A.a.a.d.a.a.a.a.a ENSGT01100000263482.A.a.a.c.a ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 Mus ANCESTRAL SPECIES 2 ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00550000074797.b ENSGT00440000033742.a.b ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT00900000143320 ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a.b ENSGT01100000263482.A.a.a.c.b ENSGT01100000263482.A.a.a.d.a.a.a.a.a ENSGT01100000263482.A.a.a.c.a ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 Mus_A ANCESTRAL SPECIES 2 ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00550000074797.b ENSGT00440000033742.a.b ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a.q ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT00900000143320 ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a.b ENSGT01100000263482.A.a.a.c.b ENSGT01100000263482.A.a.a.d.a.a.a.a.a ENSGT01100000263482.A.a.a.c.a ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 Mus_B ANCESTRAL SPECIES 2 ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00550000074797.b ENSGT00440000033742.a.b ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a.q ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT00900000143320 ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a.b ENSGT01100000263482.A.a.a.c.b ENSGT01100000263482.A.a.a.d.a.a.a.a.a ENSGT01100000263482.A.a.a.c.a ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 Mus_C ANCESTRAL SPECIES 3 ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00550000074797.b ENSGT00440000033742.a.b ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a.q ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT00900000143320 ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a.b ENSGT01100000263482.A.a.a.c.b ENSGT01100000263482.A.a.a.d.a.a.a.a.a ENSGT01100000263482.A.a.a.c.a ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 spretus MODERN SPECIES 2 Omg (MGP_SPRETEiJ_G0017667) MGP_SPRETEiJ_G0017668 MGP_SPRETEiJ_G0017669 Evi2a (MGP_SPRETEiJ_G0017670) Rab11fip4 (MGP_SPRETEiJ_G0017671) Utp6 (MGP_SPRETEiJ_G0017672) Suz12 (MGP_SPRETEiJ_G0017673) Crlf3 (MGP_SPRETEiJ_G0017674) Atad5 (MGP_SPRETEiJ_G0017675) Tefm (MGP_SPRETEiJ_G0017676) Adap2 (MGP_SPRETEiJ_G0017677) Rnf135 (MGP_SPRETEiJ_G0017678) Rhot1 (MGP_SPRETEiJ_G0017679) Rhbdl3 (MGP_SPRETEiJ_G0017680) #20 5730455P16Rik (MGP_SPRETEiJ_G0017681) #21 Zfp207 (MGP_SPRETEiJ_G0017682) #22 Psmd11 (MGP_SPRETEiJ_G0017683) Cdk5r1 (MGP_SPRETEiJ_G0017684) Myo1d (MGP_SPRETEiJ_G0017685) Tmem98 (MGP_SPRETEiJ_G0017686) Spaca3 (MGP_SPRETEiJ_G0017687) Asic2 (MGP_SPRETEiJ_G0017688) MGP_SPRETEiJ_G0017689 MGP_SPRETEiJ_G0017690 Ccl2 (MGP_SPRETEiJ_G0017691) Ccl7 (MGP_SPRETEiJ_G0017692) Ccl11 (MGP_SPRETEiJ_G0017693) Ccl12 (MGP_SPRETEiJ_G0017694) Ccl8 (MGP_SPRETEiJ_G0017695) Ccl1 (MGP_SPRETEiJ_G0017696) Tmem132e (MGP_SPRETEiJ_G0017697) Steppe mouse MODERN SPECIES 3351 Evi2b (ENSMSIG00000009267) Evi2a (ENSMSIG00000009262) Nf1 (ENSMSIG00000008704) Rab11fip4 (ENSMSIG00000008628) ENSMSIG00000008597 Utp6 (ENSMSIG00000008510) Suz12 (ENSMSIG00000008361) Crlf3 (ENSMSIG00000008282) Atad5 (ENSMSIG00000008129) Tefm (ENSMSIG00000008088) Adap2 (ENSMSIG00000008061) Rnf135 (ENSMSIG00000008044) Rhot1 (ENSMSIG00000007800) Rhbdl3 (ENSMSIG00000007754) #20 5730455P16Rik (ENSMSIG00000007744) #21 Zfp207 (ENSMSIG00000007459) #22 Psmd11 (ENSMSIG00000007357) Cdk5r1 (ENSMSIG00000007341) ENSMSIG00000007320 Myo1d (ENSMSIG00000007194) Tmem98 (ENSMSIG00000007161) Spaca3 (ENSMSIG00000007147) ENSMSIG00000007120 Asic2 (ENSMSIG00000007029) Ccl2 (ENSMSIG00000007015) ENSMSIG00000006998 Ccl7 (ENSMSIG00000006992) Ccl11 (ENSMSIG00000006983) Ccl12 (ENSMSIG00000006962) Ccl8 (ENSMSIG00000006943) Ccl1 (ENSMSIG00000006904) Mouse MODERN SPECIES 2 Nf1 (ENSMUSG00000020716) Omg (ENSMUSG00000049612) Evi2b (ENSMUSG00000093938) Evi2a (ENSMUSG00000078771) Rab11fip4 (ENSMUSG00000017639) Utp6 (ENSMUSG00000035575) Suz12 (ENSMUSG00000017548) Crlf3 (ENSMUSG00000017561) Atad5 (ENSMUSG00000017550) Tefm (ENSMUSG00000046909) Adap2 (ENSMUSG00000020709) Rnf135 (ENSMUSG00000020707) Rhot1 (ENSMUSG00000017686) Rhbdl3 (ENSMUSG00000017692) #20 5730455P16Rik (ENSMUSG00000057181) #21 Zfp207 (ENSMUSG00000017421) #22 Psmd11 (ENSMUSG00000017428) Cdk5r1 (ENSMUSG00000048895) Myo1d (ENSMUSG00000035441) Tmem98 (ENSMUSG00000035413) Spaca3 (ENSMUSG00000053184) Asic2 (ENSMUSG00000020704) Ccl2 (ENSMUSG00000035385) Ccl7 (ENSMUSG00000035373) Ccl11 (ENSMUSG00000020676) Ccl12 (ENSMUSG00000035352) Ccl8 (ENSMUSG00000009185) Ccl1 (ENSMUSG00000020702) Tmem132e (ENSMUSG00000020701) Cct6b (ENSMUSG00000020698) Zfp830 (ENSMUSG00000046010) Ryukyu mouse MODERN SPECIES 2 Omg (MGP_CAROLIEiJ_G0016823) MGP_CAROLIEiJ_G0016824 MGP_CAROLIEiJ_G0016825 Evi2a (MGP_CAROLIEiJ_G0016826) Rab11fip4 (MGP_CAROLIEiJ_G0016827) Utp6 (MGP_CAROLIEiJ_G0016828) Suz12 (MGP_CAROLIEiJ_G0016829) Crlf3 (MGP_CAROLIEiJ_G0016830) Atad5 (MGP_CAROLIEiJ_G0016831) Tefm (MGP_CAROLIEiJ_G0016832) Adap2 (MGP_CAROLIEiJ_G0016833) Rnf135 (MGP_CAROLIEiJ_G0016834) Rhot1 (MGP_CAROLIEiJ_G0016835) Rhbdl3 (MGP_CAROLIEiJ_G0016836) #20 5730455P16Rik (MGP_CAROLIEiJ_G0016837) #21 Zfp207 (MGP_CAROLIEiJ_G0016838) #22 Psmd11 (MGP_CAROLIEiJ_G0016839) Cdk5r1 (MGP_CAROLIEiJ_G0016840) Myo1d (MGP_CAROLIEiJ_G0016841) Tmem98 (MGP_CAROLIEiJ_G0016842) Spaca3 (MGP_CAROLIEiJ_G0016843) Asic2 (MGP_CAROLIEiJ_G0016844) MGP_CAROLIEiJ_G0016845 MGP_CAROLIEiJ_G0016846 Ccl2 (MGP_CAROLIEiJ_G0016847) Ccl7 (MGP_CAROLIEiJ_G0016848) Ccl11 (MGP_CAROLIEiJ_G0016849) Ccl12 (MGP_CAROLIEiJ_G0016850) Ccl8 (MGP_CAROLIEiJ_G0016851) Ccl1 (MGP_CAROLIEiJ_G0016852) Tmem132e (MGP_CAROLIEiJ_G0016853) Shrew mouse MODERN SPECIES 5 Omg (MGP_PahariEiJ_G0017960) MGP_PahariEiJ_G0017961 MGP_PahariEiJ_G0017962 Evi2a (MGP_PahariEiJ_G0017963) Rab11fip4 (MGP_PahariEiJ_G0017964) Utp6 (MGP_PahariEiJ_G0017965) Suz12 (MGP_PahariEiJ_G0017966) Crlf3 (MGP_PahariEiJ_G0017967) Atad5 (MGP_PahariEiJ_G0017968) Tefm (MGP_PahariEiJ_G0017969) Adap2 (MGP_PahariEiJ_G0017970) Rnf135 (MGP_PahariEiJ_G0017971) Rhot1 (MGP_PahariEiJ_G0017972) MGP_PahariEiJ_G0017973 #20 5730455P16Rik (MGP_PahariEiJ_G0017974) #21 Zfp207 (MGP_PahariEiJ_G0017975) #22 Psmd11 (MGP_PahariEiJ_G0017976) Cdk5r1 (MGP_PahariEiJ_G0017977) Myo1d (MGP_PahariEiJ_G0017978) Tmem98 (MGP_PahariEiJ_G0017979) Spaca3 (MGP_PahariEiJ_G0017980) Asic2 (MGP_PahariEiJ_G0017981) MGP_PahariEiJ_G0017982 MGP_PahariEiJ_G0017983 Ccl2 (MGP_PahariEiJ_G0017984) Ccl7 (MGP_PahariEiJ_G0017985) Ccl11 (MGP_PahariEiJ_G0017986) MGP_PahariEiJ_G0017987 MGP_PahariEiJ_G0017988 Ccl1 (MGP_PahariEiJ_G0017989) Tmem132e (MGP_PahariEiJ_G0017990) Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 1422 Rhot1 (ENSNGAG00000002156) Rhbdl3 (ENSNGAG00000011451) #20 5730455P16Rik (ENSNGAG00000008162) #21 ENSNGAG00000018144 #22 Psmd11 (ENSNGAG00000007349) Cdk5r1 (ENSNGAG00000015681) Myo1d (ENSNGAG00000014753) Tmem98 (ENSNGAG00000000432) Spaca3 (ENSNGAG00000019287) Asic2 (ENSNGAG00000017605) Ccl2 (ENSNGAG00000013703) Ccl7 (ENSNGAG00000012785) ENSNGAG00000010601 Ccl12 (ENSNGAG00000015220) ENSNGAG00000008109 Ccl1 (ENSNGAG00000003526) Tmem132e (ENSNGAG00000014402) ENSNGAG00000017447 Cct6b (ENSNGAG00000011636) Upper Galilee mountains blind mole rat MODERN SPECIES 1276 Fam13a (ENSNGAG00000016431) Tigd2 (ENSNGAG00000013979) Gprin3 (ENSNGAG00000000029) Snca (ENSNGAG00000017413) Mmrn1 (ENSNGAG00000013643) ENSNGAG00000014274 ENSNGAG00000012453 Grid2 (ENSNGAG00000018830) Atoh1 (ENSNGAG00000017323) Smarcad1 (ENSNGAG00000000810) Hpgds (ENSNGAG00000012687) Qrfprl (ENSNGAG00000010835) Tnip3 (ENSNGAG00000013422) Ndnf (ENSNGAG00000012166) Prdm5 (ENSNGAG00000018317) ENSNGAG00000020137 #22 Mad2l1 (ENSNGAG00000019258) ENSNGAG00000011475 Gng12 (ENSNGAG00000004651) Gadd45a (ENSNGAG00000010577) ENSNGAG00000019203 ENSNGAG00000014083 Il23r (ENSNGAG00000017497) Lesser Egyptian jerboa MODERN SPECIES 131 Lrp2bp (ENSJJAG00000021416) Snx25 (ENSJJAG00000011269) ENSJJAG00000016310 Cfap97 (ENSJJAG00000022129) Slc25a4 (ENSJJAG00000000440) Helt (ENSJJAG00000000703) ENSJJAG00000001971 Acsl1 (ENSJJAG00000011663) Cenpu (ENSJJAG00000018172) Primpol (ENSJJAG00000020921) Casp3 (ENSJJAG00000010159) ENSJJAG00000005302 ENSJJAG00000011175 ENSJJAG00000015216 Enpp6 (ENSJJAG00000015782) ENSJJAG00000023183 #22 ENSJJAG00000000499 Stox2 (ENSJJAG00000020846) ENSJJAG00000005969 Kangaroo rat MODERN SPECIES 350 Omg (ENSDORG00000026854) Evi2b (ENSDORG00000011472) Evi2a (ENSDORG00000026168) Nf1 (ENSDORG00000011467) Rab11fip4 (ENSDORG00000011807) Utp6 (ENSDORG00000003843) Suz12 (ENSDORG00000000460) Crlf3 (ENSDORG00000015909) Atad5 (ENSDORG00000000344) Tefm (ENSDORG00000000352) Adap2 (ENSDORG00000006678) ENSDORG00000025558 Rhot1 (ENSDORG00000001407) Rhbdl3 (ENSDORG00000024743) #20 5730455P16Rik (ENSDORG00000007133) #21 Zfp207 (ENSDORG00000007139) #22 Psmd11 (ENSDORG00000011438) Cdk5r1 (ENSDORG00000011445) Myo1d (ENSDORG00000011446) Tmem98 (ENSDORG00000026828) Spaca3 (ENSDORG00000015899) Asic2 (ENSDORG00000015901) Ccl7 (ENSDORG00000003289) ENSDORG00000007302 Tmem132e (ENSDORG00000006863) Rodentia_A ANCESTRAL SPECIES 3 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT01000000215472 ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.c.a ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 Hystricomorpha ANCESTRAL SPECIES 3 ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.c.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.c.a.b ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a Hystricomorpha_a ANCESTRAL SPECIES ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.c.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.c.a.b ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a Hystricomorpha_b ANCESTRAL SPECIES ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.c.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.c.a.b ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a Long-tailed chinchilla MODERN SPECIES 188 OMG (ENSCLAG00000012747) EVI2B (ENSCLAG00000017819) EVI2A (ENSCLAG00000013303) RAB11FIP4 (ENSCLAG00000012724) COPRS (ENSCLAG00000013385) UTP6 (ENSCLAG00000007274) SUZ12 (ENSCLAG00000008281) CRLF3 (ENSCLAG00000009651) ATAD5 (ENSCLAG00000009928) TEFM (ENSCLAG00000006597) ADAP2 (ENSCLAG00000005862) ENSCLAG00000007154 RHOT1 (ENSCLAG00000007856) RHBDL3 (ENSCLAG00000008877) #20 C17orf75 (ENSCLAG00000007683) #21 ZNF207 (ENSCLAG00000006441) #22 PSMD11 (ENSCLAG00000009489) CDK5R1 (ENSCLAG00000017838) MYO1D (ENSCLAG00000009101) TMEM98 (ENSCLAG00000007965) SPACA3 (ENSCLAG00000008459) ASIC2 (ENSCLAG00000004876) ENSCLAG00000005731 ENSCLAG00000006066 CCL11 (ENSCLAG00000004752) ENSCLAG00000005107 ENSCLAG00000006411 TMEM132E (ENSCLAG00000006946) CCT6B (ENSCLAG00000014724) ZNF830 (ENSCLAG00000017672) LIG3 (ENSCLAG00000009138) Degu MODERN SPECIES 113 NF1 (ENSODEG00000011949) OMG (ENSODEG00000011985) EVI2B (ENSODEG00000013035) RAB11FIP4 (ENSODEG00000015676) ENSODEG00000012209 COPRS (ENSODEG00000011871) UTP6 (ENSODEG00000011971) SUZ12 (ENSODEG00000013459) ENSODEG00000013349 ATAD5 (ENSODEG00000014008) ADAP2 (ENSODEG00000011944) ENSODEG00000013107 RHOT1 (ENSODEG00000012674) RHBDL3 (ENSODEG00000012800) #20 C17orf75 (ENSODEG00000012638) #21 ZNF207 (ENSODEG00000012683) #22 ENSODEG00000013615 ENSODEG00000014487 CDK5R1 (ENSODEG00000020159) MYO1D (ENSODEG00000012420) TMEM98 (ENSODEG00000012273) ENSODEG00000012654 ASIC2 (ENSODEG00000012964) CCL11 (ENSODEG00000013280) ENSODEG00000013352 TMEM132E (ENSODEG00000013225) CCT6B (ENSODEG00000013365) ENSODEG00000020133 ZNF830 (ENSODEG00000012121) LIG3 (ENSODEG00000014335) RFFL (ENSODEG00000013992) Guinea pig MODERN SPECIES 32 OR4K2 (ENSCPOG00000030333) OR4Q3 (ENSCPOG00000020338) RAB11FIP4 (ENSCPOG00000011634) COPRS (ENSCPOG00000006018) UTP6 (ENSCPOG00000014294) ENSCPOG00000034287 SUZ12 (ENSCPOG00000024628) CRLF3 (ENSCPOG00000008693) ATAD5 (ENSCPOG00000011900) TEFM (ENSCPOG00000011909) ADAP2 (ENSCPOG00000004369) RNF135 (ENSCPOG00000004880) RHOT1 (ENSCPOG00000007927) RHBDL3 (ENSCPOG00000022880) #20 C17orf75 (ENSCPOG00000013162) #21 ZNF207 (ENSCPOG00000001728) #22 PSMD11 (ENSCPOG00000009798) CDK5R1 (ENSCPOG00000020676) MYO1D (ENSCPOG00000000149) TMEM98 (ENSCPOG00000000153) SPACA3 (ENSCPOG00000027605) ASIC2 (ENSCPOG00000025132) ENSCPOG00000033808 ENSCPOG00000013468 CCL7 (ENSCPOG00000013035) CCL11 (ENSCPOG00000032138) ENSCPOG00000033402 TMEM132E (ENSCPOG00000001908) CCT6B (ENSCPOG00000002794) ZNF830 (ENSCPOG00000031218) LIG3 (ENSCPOG00000013032) Naked mole-rat female MODERN SPECIES 12 ENSHGLG00000017502 MPO (ENSHGLG00000019104) LPO (ENSHGLG00000018067) MKS1 (ENSHGLG00000012631) ENSHGLG00000037944 ENSHGLG00000045253 ENSHGLG00000010660 ENSHGLG00000009908 ENSHGLG00000010534 ENSHGLG00000010961 ENSHGLG00000041636 RHOT1 (ENSHGLG00000011785) ENSHGLG00000049011 #20 C17orf75 (ENSHGLG00000019463) #21 ENSHGLG00000002460 ZNF207 (ENSHGLG00000019501) #22 PSMD11 (ENSHGLG00000019505) CDK5R1 (ENSHGLG00000037917) MYO1D (ENSHGLG00000015796) TMEM98 (ENSHGLG00000015858) SPACA3 (ENSHGLG00000015911) ASIC2 (ENSHGLG00000000958) CCL2 (ENSHGLG00000034308) CCL11 (ENSHGLG00000001015) ENSHGLG00000001025 ENSHGLG00000042122 Lig3 (ENSHGLG00000001349) ENSHGLG00000001734 RAD51D (ENSHGLG00000001857) FNDC8 (ENSHGLG00000001963) NLE1 (ENSHGLG00000002006) Sciuridae ANCESTRAL SPECIES 4 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT01000000215472 ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.c.a ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 Eurasian red squirrel MODERN SPECIES 12 OMG (ENSSVLG00005015267) EVI2B (ENSSVLG00005015286) EVI2A (ENSSVLG00005015311) RAB11FIP4 (ENSSVLG00005015383) COPRS (ENSSVLG00005015650) UTP6 (ENSSVLG00005015715) SUZ12 (ENSSVLG00005015781) CRLF3 (ENSSVLG00005016089) ATAD5 (ENSSVLG00005016127) TEFM (ENSSVLG00005016323) ADAP2 (ENSSVLG00005016368) RNF135 (ENSSVLG00005016571) RHOT1 (ENSSVLG00005016781) RHBDL3 (ENSSVLG00005016946) #20 C17orf75 (ENSSVLG00005017088) #21 ZNF207 (ENSSVLG00005017171) #22 ENSSVLG00005017498 CDK5R1 (ENSSVLG00005017534) MYO1D (ENSSVLG00005017566) ENSSVLG00005017677 TMEM98 (ENSSVLG00005017715) ENSSVLG00005017765 ASIC2 (ENSSVLG00005017834) ENSSVLG00005018047 ENSSVLG00005018082 ENSSVLG00005018128 ENSSVLG00005018180 ENSSVLG00005018242 ENSSVLG00005018284 ENSSVLG00005018440 ENSSVLG00005018536 Marmotini ANCESTRAL SPECIES 39 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT01000000215472 ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.c.a ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 Marmotini_b DUPLICATION Marmotini_b ANCESTRAL SPECIES 34 ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057.q #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.c.a ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 Squirrel MODERN SPECIES 138 OMG (ENSSTOG00000005562) EVI2B (ENSSTOG00000026274) NF1 (ENSSTOG00000034066) RAB11FIP4 (ENSSTOG00000010883) COPRS (ENSSTOG00000025397) UTP6 (ENSSTOG00000015875) SUZ12 (ENSSTOG00000022754) CRLF3 (ENSSTOG00000012342) ATAD5 (ENSSTOG00000025411) TEFM (ENSSTOG00000012367) ADAP2 (ENSSTOG00000025811) RNF135 (ENSSTOG00000027338) RHOT1 (ENSSTOG00000011738) RHBDL3 (ENSSTOG00000000698) #20 C17orf75 (ENSSTOG00000000705) #21 ENSSTOG00000000712 #22 PSMD11 (ENSSTOG00000009686) CDK5R1 (ENSSTOG00000009703) MYO1D (ENSSTOG00000000438) TMEM98 (ENSSTOG00000011945) ASIC2 (ENSSTOG00000027185) ENSSTOG00000028166 CCL7 (ENSSTOG00000032557) CCL11 (ENSSTOG00000012718) ENSSTOG00000023292 CCL1 (ENSSTOG00000007409) TMEM132E (ENSSTOG00000024193) CCT6B (ENSSTOG00000027687) ZNF830 (ENSSTOG00000006057) LIG3 (ENSSTOG00000006065) RFFL (ENSSTOG00000006115) Arctic ground squirrel MODERN SPECIES 63 EVI2B (ENSUPAG00010022480) EVI2A (ENSUPAG00010022481) RAB11FIP4 (ENSUPAG00010022484) ENSUPAG00010022485 COPRS (ENSUPAG00010022492) ENSUPAG00010022494 SUZ12 (ENSUPAG00010022503) CRLF3 (ENSUPAG00010022508) ATAD5 (ENSUPAG00010022514) TEFM (ENSUPAG00010022537) ADAP2 (ENSUPAG00010022538) RNF135 (ENSUPAG00010022541) RHOT1 (ENSUPAG00010022548) RHBDL3 (ENSUPAG00010023045) #20 C17orf75 (ENSUPAG00010023047) #21 ZNF207 (ENSUPAG00010023051) #22 PSMD11 (ENSUPAG00010023057) CDK5R1 (ENSUPAG00010023059) MYO1D (ENSUPAG00010023060) TMEM98 (ENSUPAG00010023062) SPACA3 (ENSUPAG00010023063) ASIC2 (ENSUPAG00010023064) Marmotini_b ANCESTRAL SPECIES ENSGT00730000111057.r #22 Squirrel MODERN SPECIES 573 ENSSTOG00000030534 #22 Alpin marmot MODERN SPECIES 71 EVI2B (ENSMMMG00000012769) EVI2A (ENSMMMG00000012771) ENSMMMG00000012772 RAB11FIP4 (ENSMMMG00000012781) ENSMMMG00000012799 COPRS (ENSMMMG00000012825) UTP6 (ENSMMMG00000012830) SUZ12 (ENSMMMG00000012866) CRLF3 (ENSMMMG00000012930) TEFM (ENSMMMG00000012960) ADAP2 (ENSMMMG00000012962) RNF135 (ENSMMMG00000012984) RHOT1 (ENSMMMG00000013006) RHBDL3 (ENSMMMG00000013354) #20 C17orf75 (ENSMMMG00000013368) #21 ZNF207 (ENSMMMG00000013387) #22 PSMD11 (ENSMMMG00000013441) CDK5R1 (ENSMMMG00000013447) MYO1D (ENSMMMG00000013449) ENSMMMG00000013474 SPACA3 (ENSMMMG00000013483) ASIC2 (ENSMMMG00000013492) ENSMMMG00000013509 CCL7 (ENSMMMG00000013514) CCL11 (ENSMMMG00000013522) ENSMMMG00000013534 ENSMMMG00000013542 ENSMMMG00000013547 CCT6B (ENSMMMG00000013567) ZNF830 (ENSMMMG00000013592) LIG3 (ENSMMMG00000013596) Primates ANCESTRAL SPECIES 3 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT01000000215472 ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00490000044407 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00740000117022 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01100000263482.F ENSGT00940000158479 Strepsirrhini ANCESTRAL SPECIES 4 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT01000000215472 ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01100000263482.F ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 Lemuriformes ANCESTRAL SPECIES 2 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT01000000215472 ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01100000263482.F ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 Mouse lemur MODERN SPECIES 7 ENSMICG00000037781 NF1 (ENSMICG00000002852) OMG (ENSMICG00000002876) RAB11FIP4 (ENSMICG00000002885) COPRS (ENSMICG00000029453) UTP6 (ENSMICG00000002632) SUZ12 (ENSMICG00000002637) CRLF3 (ENSMICG00000033044) ATAD5 (ENSMICG00000003613) TEFM (ENSMICG00000009936) ADAP2 (ENSMICG00000003621) RNF135 (ENSMICG00000005151) RHOT1 (ENSMICG00000007771) RHBDL3 (ENSMICG00000007783) #20 C17orf75 (ENSMICG00000007788) #21 ZNF207 (ENSMICG00000002395) #22 ENSMICG00000026860 PSMD11 (ENSMICG00000011849) CDK5R1 (ENSMICG00000042797) MYO1D (ENSMICG00000011863) TMEM98 (ENSMICG00000011888) SPACA3 (ENSMICG00000043535) ASIC2 (ENSMICG00000035781) CCL2 (ENSMICG00000034682) CCL8 (ENSMICG00000037888) CCL13 (ENSMICG00000036035) CCL1 (ENSMICG00000042374) TMEM132E (ENSMICG00000003085) CCT6B (ENSMICG00000035976) LIG3 (ENSMICG00000006814) RFFL (ENSMICG00000006829) Lemuriformes_a ANCESTRAL SPECIES ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT01000000215472 ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01100000263482.F ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 Greater bamboo lemur MODERN SPECIES 167 EVI2A (ENSPSMG00000015849) RAB11FIP4 (ENSPSMG00000015899) ENSPSMG00000015918 COPRS (ENSPSMG00000015946) UTP6 (ENSPSMG00000016038) SUZ12 (ENSPSMG00000016122) CRLF3 (ENSPSMG00000016147) ATAD5 (ENSPSMG00000016178) TEFM (ENSPSMG00000016197) ADAP2 (ENSPSMG00000016226) RNF135 (ENSPSMG00000016233) RHOT1 (ENSPSMG00000016604) RHBDL3 (ENSPSMG00000016749) #20 ENSPSMG00000016756 C17orf75 (ENSPSMG00000016774) #21 ZNF207 (ENSPSMG00000016931) #22 PSMD11 (ENSPSMG00000016979) CDK5R1 (ENSPSMG00000016985) MYO1D (ENSPSMG00000017027) TMEM98 (ENSPSMG00000017093) SPACA3 (ENSPSMG00000017102) ASIC2 (ENSPSMG00000017117) CCL2 (ENSPSMG00000017119) ENSPSMG00000017122 CCL11 (ENSPSMG00000017132) CCL8 (ENSPSMG00000017139) CCL13 (ENSPSMG00000017153) TMEM132E (ENSPSMG00000017176) ENSPSMG00000017180 CCT6B (ENSPSMG00000017271) ZNF830 (ENSPSMG00000017386) Coquerels sifaka MODERN SPECIES 400 WSB1 (ENSPCOG00000026459) NF1 (ENSPCOG00000025474) RAB11FIP4 (ENSPCOG00000027596) ENSPCOG00000017944 COPRS (ENSPCOG00000016471) UTP6 (ENSPCOG00000010224) SUZ12 (ENSPCOG00000014564) CRLF3 (ENSPCOG00000015459) ATAD5 (ENSPCOG00000017323) TEFM (ENSPCOG00000022322) ADAP2 (ENSPCOG00000020468) RNF135 (ENSPCOG00000022621) ENSPCOG00000014537 RHBDL3 (ENSPCOG00000027181) #20 C17orf75 (ENSPCOG00000028496) #21 ZNF207 (ENSPCOG00000020744) #22 PSMD11 (ENSPCOG00000020989) CDK5R1 (ENSPCOG00000002073) MYO1D (ENSPCOG00000015762) TMEM98 (ENSPCOG00000020899) SPACA3 (ENSPCOG00000018597) ASIC2 (ENSPCOG00000025881) CCL2 (ENSPCOG00000015709) ENSPCOG00000009890 CCL11 (ENSPCOG00000013678) CCL8 (ENSPCOG00000003413) CCL13 (ENSPCOG00000020576) CCL1 (ENSPCOG00000027470) TMEM132E (ENSPCOG00000014193) Bushbaby DUPLICATION Bushbaby MODERN SPECIES 227 EVI2B (ENSOGAG00000010069) EVI2A (ENSOGAG00000033499) ENSOGAG00000032163 RAB11FIP4 (ENSOGAG00000016294) COPRS (ENSOGAG00000004510) UTP6 (ENSOGAG00000004511) SUZ12 (ENSOGAG00000016923) CRLF3 (ENSOGAG00000001185) ATAD5 (ENSOGAG00000001186) TEFM (ENSOGAG00000001190) ADAP2 (ENSOGAG00000001192) RNF135 (ENSOGAG00000001193) RHOT1 (ENSOGAG00000001194) RHBDL3 (ENSOGAG00000001197) #20 C17orf75 (ENSOGAG00000001198) #21 ENSOGAG00000001200 #22 PSMD11 (ENSOGAG00000015456) CDK5R1 (ENSOGAG00000034547) MYO1D (ENSOGAG00000015457) TMEM98 (ENSOGAG00000015459) SPACA3 (ENSOGAG00000025382) ASIC2 (ENSOGAG00000015461) CCL7 (ENSOGAG00000003894) CCL11 (ENSOGAG00000003893) ENSOGAG00000028610 CCL13 (ENSOGAG00000003892) ENSOGAG00000003889 TMEM132E (ENSOGAG00000008267) CCT6B (ENSOGAG00000009862) ZNF830 (ENSOGAG00000009870) LIG3 (ENSOGAG00000009871) Bushbaby MODERN SPECIES 232 ENSOGAG00000032990 GPR101 (ENSOGAG00000006478) ZIC3 (ENSOGAG00000011700) ENSOGAG00000025744 ENSOGAG00000027112 FGF13 (ENSOGAG00000031744) ENSOGAG00000030480 ENSOGAG00000029354 ENSOGAG00000028887 F9 (ENSOGAG00000000863) MCF2 (ENSOGAG00000000864) ATP11C (ENSOGAG00000002088) ENSOGAG00000015306 ENSOGAG00000029856 #22 ENSOGAG00000033659 ENSOGAG00000030168 ENSOGAG00000034439 ENSOGAG00000031982 ENSOGAG00000028331 ENSOGAG00000034324 SOX3 (ENSOGAG00000025781) ENSOGAG00000026459 ENSOGAG00000029605 ENSOGAG00000034583 LDOC1 (ENSOGAG00000034696) ENSOGAG00000029867 ENSOGAG00000029270 SLITRK4 (ENSOGAG00000007373) Haplorrhini ANCESTRAL SPECIES 6 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT01000000215472 ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00490000044407 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00740000117022 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01100000263482.F ENSGT01030000234760 Tarsier MODERN SPECIES 2201 ZNF207 (ENSTSYG00000003620) #22 PSMD11 (ENSTSYG00000012073) CDK5R1 (ENSTSYG00000011930) MYO1D (ENSTSYG00000011934) Simiiformes ANCESTRAL SPECIES 7 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT01000000215472 ENSGT00390000007384 ENSGT00390000016493.b.b ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00490000044407 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00740000117022 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01100000263482.F ENSGT00940000158479 Catarrhini ANCESTRAL SPECIES 8 ENSGT00440000033742.a.b ENSGT01000000215472 ENSGT00390000007384 ENSGT00390000016493.b.b ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00490000044407 ENSGT00730000111572.b ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00740000117022 ENSGT00390000012062.m ENSGT00940000161810 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01100000263482.F ENSGT00390000003008 Hominoidea ANCESTRAL SPECIES 27 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384.c.a ENSGT00390000016493.b.b ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00730000111572.b ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00740000117022 ENSGT00390000012062.m ENSGT00940000161810 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01100000263482.F ENSGT00390000003008 Hominidae ANCESTRAL SPECIES 20 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384.d ENSGT00390000016493.b.b ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00730000111572.b ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00740000117022 ENSGT00390000012062.m ENSGT00940000161810 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01100000263482.F ENSGT00390000003008 Orangutan MODERN SPECIES 8 EVI2A (ENSPPYG00000008150) EVI2B (ENSPPYG00000008149) OMG (ENSPPYG00000008148) ENSPPYG00000008146 RNF135 (ENSPPYG00000008145) ADAP2 (ENSPPYG00000008144) TEFM (ENSPPYG00000008143) ATAD5 (ENSPPYG00000039479) CRLF3 (ENSPPYG00000008142) ENSPPYG00000040619 ENSPPYG00000008155 RHOT1 (ENSPPYG00000008157) ENSPPYG00000008158 RHBDL3 (ENSPPYG00000008159) #20 C17H17orf75 (ENSPPYG00000008160) #21 ZNF207 (ENSPPYG00000008161) #22 PSMD11 (ENSPPYG00000008162) CDK5R1 (ENSPPYG00000008163) MYO1D (ENSPPYG00000008164) TMEM98 (ENSPPYG00000008166) SPACA3 (ENSPPYG00000008867) ASIC2 (ENSPPYG00000008167) CCL2 (ENSPPYG00000008169) CCL7 (ENSPPYG00000008170) CCL11 (ENSPPYG00000008171) CCL8 (ENSPPYG00000029480) CCL13 (ENSPPYG00000036667) CCL1 (ENSPPYG00000041084) TMEM132E (ENSPPYG00000008862) CCT6B (ENSPPYG00000008174) ZNF830 (ENSPPYG00000008175) Homo/Pan/Gorilla group ANCESTRAL SPECIES 1 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384.d ENSGT00390000016493.b.b ENSGT00390000012364 ENSGT00940000153469.a.b.g.a ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00730000111572.b ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00910000148183 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00740000117022 ENSGT00390000012062.m ENSGT00940000161810 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01100000263482.F ENSGT00390000003008 Gorilla DUPLICATION Gorilla MODERN SPECIES 18 ENSGGOG00000025742 EVI2B (ENSGGOG00000005182) EVI2A (ENSGGOG00000024807) NF1 (ENSGGOG00000006983) RAB11FIP4 (ENSGGOG00000001071) COPRS (ENSGGOG00000007292) UTP6 (ENSGGOG00000013569) SUZ12 (ENSGGOG00000010352) ENSGGOG00000026947 ENSGGOG00000043944 ENSGGOG00000037185 RHOT1 (ENSGGOG00000006643) ENSGGOG00000037024 RHBDL3 (ENSGGOG00000010876) #20 C17orf75 (ENSGGOG00000002514) #21 ENSGGOG00000024003 #22 PSMD11 (ENSGGOG00000001054) CDK5R1 (ENSGGOG00000040028) MYO1D (ENSGGOG00000000276) TMEM98 (ENSGGOG00000013333) SPACA3 (ENSGGOG00000001125) ENSGGOG00000040939 ENSGGOG00000041068 CCL2 (ENSGGOG00000016211) CCL7 (ENSGGOG00000004500) ENSGGOG00000044068 ENSGGOG00000044171 CCL8 (ENSGGOG00000004504) CCL13 (ENSGGOG00000002887) CCL1 (ENSGGOG00000028387) TMEM132E (ENSGGOG00000015325) Gorilla MODERN SPECIES 15 DYTN (ENSGGOG00000027242) FAM237A (ENSGGOG00000037017) ADAM23 (ENSGGOG00000012509) ENSGGOG00000024971 ZDBF2 (ENSGGOG00000023142) ENSGGOG00000042195 EEF1B2 (ENSGGOG00000007002) NDUFS1 (ENSGGOG00000001513) INO80D (ENSGGOG00000015570) NRP2 (ENSGGOG00000009537) PARD3B (ENSGGOG00000034911) ICOS (ENSGGOG00000014097) CTLA4 (ENSGGOG00000007961) ENSGGOG00000039900 CD28 (ENSGGOG00000041735) ENSGGOG00000023735 #22 RAPH1 (ENSGGOG00000016399) ABI2 (ENSGGOG00000016384) CYP20A1 (ENSGGOG00000007044) NBEAL1 (ENSGGOG00000015453) ENSGGOG00000036442 WDR12 (ENSGGOG00000026073) ICA1L (ENSGGOG00000017038) ENSGGOG00000016194 ENSGGOG00000014813 BMPR2 (ENSGGOG00000010989) ENSGGOG00000042085 ENSGGOG00000014545 ENSGGOG00000026439 ENSGGOG00000007480 ENSGGOG00000027043 Homo/Pan group ANCESTRAL SPECIES 2 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384.c.a ENSGT00390000016493.b.b ENSGT00390000012364 ENSGT00940000153469.a.b.g.a ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00730000111572.b ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00910000148183 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00740000117022 ENSGT00390000012062.m ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01100000263482.F ENSGT00390000003008 ENSGT00940000158479 Human MODERN SPECIES 8 ADAP2 (ENSG00000184060) RNF135 (ENSG00000181481) NF1 (ENSG00000196712) OMG (ENSG00000126861) EVI2B (ENSG00000185862) ENSG00000265118 EVI2A (ENSG00000126860) RAB11FIP4 (ENSG00000131242) COPRS (ENSG00000172301) UTP6 (ENSG00000108651) SUZ12 (ENSG00000178691) LRRC37B (ENSG00000185158) RHOT1 (ENSG00000126858) RHBDL3 (ENSG00000141314) #20 C17orf75 (ENSG00000108666) #21 ZNF207 (ENSG00000010244) #22 PSMD11 (ENSG00000108671) CDK5R1 (ENSG00000176749) MYO1D (ENSG00000176658) H2BN1 (ENSG00000290320) TMEM98 (ENSG00000006042) SPACA3 (ENSG00000141316) ASIC2 (ENSG00000108684) CCL2 (ENSG00000108691) CCL7 (ENSG00000108688) CCL11 (ENSG00000172156) CCL8 (ENSG00000108700) CCL13 (ENSG00000181374) CCL1 (ENSG00000108702) TMEM132E (ENSG00000181291) CCT6B (ENSG00000132141) Pan ANCESTRAL SPECIES 3 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384.d ENSGT00390000016493.b.b ENSGT00390000012364 ENSGT00940000153469.a.b.g.a ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00730000111572.b ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00910000148183 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062.m ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01100000263482.F ENSGT00390000003008 ENSGT00940000158479 ENSGT00940000156339 Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 8 NF1 (ENSPTRG00000008970) RAB11FIP4 (ENSPTRG00000008974) COPRS (ENSPTRG00000008976) UTP6 (ENSPTRG00000008977) SUZ12 (ENSPTRG00000008980) CRLF3 (ENSPTRG00000008963) ATAD5 (ENSPTRG00000008964) TEFM (ENSPTRG00000008965) ADAP2 (ENSPTRG00000008966) RNF135 (ENSPTRG00000008967) ENSPTRG00000050077 RHOT1 (ENSPTRG00000008986) ENSPTRG00000051245 RHBDL3 (ENSPTRG00000008987) #20 C17H17orf75 (ENSPTRG00000008988) #21 ZNF207 (ENSPTRG00000008989) #22 PSMD11 (ENSPTRG00000008990) CDK5R1 (ENSPTRG00000030892) MYO1D (ENSPTRG00000008991) TMEM98 (ENSPTRG00000008993) SPACA3 (ENSPTRG00000049269) ASIC2 (ENSPTRG00000008996) CCL2 (ENSPTRG00000008999) CCL7 (ENSPTRG00000009000) CCL11 (ENSPTRG00000048230) CCL8 (ENSPTRG00000009002) CCL13 (ENSPTRG00000043899) CCL1 (ENSPTRG00000009004) TMEM132E (ENSPTRG00000009005) CCT6B (ENSPTRG00000023221) ZNF830 (ENSPTRG00000009007) Chimpanzee MODERN SPECIES 15 DYTN (ENSPTRG00000042355) FAM237A (ENSPTRG00000045763) ADAM23 (ENSPTRG00000012846) ZDBF2 (ENSPTRG00000029052) ENSPTRG00000052002 CMKLR2 (ENSPTRG00000012844) EEF1B2 (ENSPTRG00000049619) NDUFS1 (ENSPTRG00000012842) INO80D (ENSPTRG00000012841) NRP2 (ENSPTRG00000012839) PARD3B (ENSPTRG00000012838) ICOS (ENSPTRG00000012837) CTLA4 (ENSPTRG00000044793) ENSPTRG00000051964 CD28 (ENSPTRG00000012833) ENSPTRG00000043246 #22 RAPH1 (ENSPTRG00000012831) ABI2 (ENSPTRG00000012830) ENSPTRG00000012829 NBEAL1 (ENSPTRG00000012828) CARF (ENSPTRG00000012824) WDR12 (ENSPTRG00000012823) ICA1L (ENSPTRG00000012822) ENSPTRG00000044806 ENSPTRG00000040928 FAM117B (ENSPTRG00000012821) BMPR2 (ENSPTRG00000029076) ENSPTRG00000047517 NOP58 (ENSPTRG00000012818) ENSPTRG00000012817 ENSPTRG00000049039 Bonobo DUPLICATION Bonobo MODERN SPECIES 8 NF1 (ENSPPAG00000030406) RAB11FIP4 (ENSPPAG00000036623) ENSPPAG00000039082 UTP6 (ENSPPAG00000038089) CRLF3 (ENSPPAG00000037920) ATAD5 (ENSPPAG00000030438) TEFM (ENSPPAG00000039403) ADAP2 (ENSPPAG00000027684) ENSPPAG00000031531 ENSPPAG00000022296 ENSPPAG00000012149 RHOT1 (ENSPPAG00000027700) ENSPPAG00000034448 RHBDL3 (ENSPPAG00000027407) #20 C17orf75 (ENSPPAG00000028763) #21 ENSPPAG00000032098 #22 PSMD11 (ENSPPAG00000044105) CDK5R1 (ENSPPAG00000030747) MYO1D (ENSPPAG00000036175) TMEM98 (ENSPPAG00000037372) SPACA3 (ENSPPAG00000039834) ENSPPAG00000038474 ENSPPAG00000035274 CCL2 (ENSPPAG00000033176) CCL7 (ENSPPAG00000029310) CCL11 (ENSPPAG00000041920) CCL8 (ENSPPAG00000039853) CCL13 (ENSPPAG00000041440) CCL1 (ENSPPAG00000004362) ENSPPAG00000041711 TMEM132E (ENSPPAG00000034783) Bonobo MODERN SPECIES 15 ENSPPAG00000031338 DYTN (ENSPPAG00000008787) FAM237A (ENSPPAG00000028915) ADAM23 (ENSPPAG00000030147) ZDBF2 (ENSPPAG00000038901) ENSPPAG00000031391 ENSPPAG00000033754 NDUFS1 (ENSPPAG00000032284) INO80D (ENSPPAG00000017120) ENSPPAG00000040957 NRP2 (ENSPPAG00000041062) PARD3B (ENSPPAG00000033958) ICOS (ENSPPAG00000037117) CTLA4 (ENSPPAG00000041661) CD28 (ENSPPAG00000034998) ENSPPAG00000032675 #22 RAPH1 (ENSPPAG00000024317) ABI2 (ENSPPAG00000030582) CYP20A1 (ENSPPAG00000040724) NBEAL1 (ENSPPAG00000040934) CARF (ENSPPAG00000042960) ENSPPAG00000033697 ICA1L (ENSPPAG00000037623) ENSPPAG00000027947 FAM117B (ENSPPAG00000041596) BMPR2 (ENSPPAG00000017269) ENSPPAG00000043823 NOP58 (ENSPPAG00000036626) ENSPPAG00000039520 ENSPPAG00000039551 ENSPPAG00000036444 Gibbon DUPLICATION Gibbon MODERN SPECIES 4 FOXN2 (ENSNLEG00000008649) MSH6 (ENSNLEG00000008521) FBXO11 (ENSNLEG00000008539) ENSNLEG00000029761 MSH2 (ENSNLEG00000008421) EPCAM (ENSNLEG00000008380) ENSNLEG00000035354 CRLF3 (ENSNLEG00000005850) ATAD5 (ENSNLEG00000005853) TEFM (ENSNLEG00000005875) ADAP2 (ENSNLEG00000005879) ENSNLEG00000030868 RHOT1 (ENSNLEG00000005886) ENSNLEG00000005933 #20 C17orf75 (ENSNLEG00000031662) #21 ENSNLEG00000005954 #22 PSMD11 (ENSNLEG00000005992) MYO1D (ENSNLEG00000006028) ENSNLEG00000028584 SPACA3 (ENSNLEG00000014819) ENSNLEG00000006041 ENSNLEG00000032286 CA4 (ENSNLEG00000000324) ENSNLEG00000000355 ENSNLEG00000000340 CHCT1 (ENSNLEG00000000357) ENSNLEG00000033351 ENSNLEG00000035218 APPBP2 (ENSNLEG00000000368) PPM1D (ENSNLEG00000000379) BCAS3 (ENSNLEG00000000387) Gibbon MODERN SPECIES 14 DYTN (ENSNLEG00000007113) FAM237A (ENSNLEG00000007112) ADAM23 (ENSNLEG00000007102) ZDBF2 (ENSNLEG00000007100) ENSNLEG00000033131 ENSNLEG00000007098 NDUFS1 (ENSNLEG00000007090) INO80D (ENSNLEG00000032256) NRP2 (ENSNLEG00000007071) ENSNLEG00000036209 ENSNLEG00000007066 ICOS (ENSNLEG00000007065) CTLA4 (ENSNLEG00000007059) CD28 (ENSNLEG00000007057) ENSNLEG00000029125 ENSNLEG00000035533 #22 ENSNLEG00000030127 RAPH1 (ENSNLEG00000007048) ENSNLEG00000007043 CYP20A1 (ENSNLEG00000035097) ENSNLEG00000029450 NBEAL1 (ENSNLEG00000007032) CARF (ENSNLEG00000007026) WDR12 (ENSNLEG00000007018) ICA1L (ENSNLEG00000007012) ENSNLEG00000027717 ENSNLEG00000029928 ENSNLEG00000007009 BMPR2 (ENSNLEG00000007004) ENSNLEG00000031345 NOP58 (ENSNLEG00000007000) Cercopithecidae ANCESTRAL SPECIES 6 ENSGT01000000215472 ENSGT00390000007384 ENSGT00390000016493.b.b ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00490000044407 ENSGT00730000111572.b ENSGT00940000155641 ENSGT00390000006548.b.k.lb ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062.m ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01100000263482.F ENSGT00390000003008 ENSGT00940000158479 ENSGT00940000156339 Rhinopithecus ANCESTRAL SPECIES 125 ENSGT00940000155671.q.a ENSGT00390000007384 ENSGT00390000016493.b.b ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00390000006922.m.b.a.c.a ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00730000111572.b ENSGT00940000155641 ENSGT00390000006548.b.k.lb ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062.m ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01100000263482.F ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 Black snub-nosed monkey MODERN SPECIES 1024 ENSRBIG00000031245 COPRS (ENSRBIG00000040651) UTP6 (ENSRBIG00000020822) SUZ12 (ENSRBIG00000035000) CRLF3 (ENSRBIG00000040685) ENSRBIG00000043638 ATAD5 (ENSRBIG00000028803) TEFM (ENSRBIG00000044300) ADAP2 (ENSRBIG00000031583) RNF135 (ENSRBIG00000032245) ENSRBIG00000037919 RHOT1 (ENSRBIG00000028432) ENSRBIG00000010676 RHBDL3 (ENSRBIG00000037522) #20 C17orf75 (ENSRBIG00000036493) #21 ZNF207 (ENSRBIG00000030664) #22 PSMD11 (ENSRBIG00000031642) CDK5R1 (ENSRBIG00000029772) MYO1D (ENSRBIG00000030384) TMEM98 (ENSRBIG00000033509) SPACA3 (ENSRBIG00000031083) ENSRBIG00000011050 ASIC2 (ENSRBIG00000039882) CCL2 (ENSRBIG00000039932) CCL7 (ENSRBIG00000035832) CCL11 (ENSRBIG00000043002) CCL8 (ENSRBIG00000040497) CCL13 (ENSRBIG00000037720) CCL1 (ENSRBIG00000032049) TMEM132E (ENSRBIG00000034726) ZNF830 (ENSRBIG00000029713) Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 1659 ENSRROG00000039704 ATAD5 (ENSRROG00000040978) TEFM (ENSRROG00000030422) ADAP2 (ENSRROG00000033024) RNF135 (ENSRROG00000043224) ENSRROG00000043873 RHOT1 (ENSRROG00000041054) ENSRROG00000009075 RHBDL3 (ENSRROG00000032686) #20 C17orf75 (ENSRROG00000035975) #21 ENSRROG00000037743 #22 PSMD11 (ENSRROG00000032071) CDK5R1 (ENSRROG00000026898) MYO1D (ENSRROG00000036278) TMEM98 (ENSRROG00000044185) SPACA3 (ENSRROG00000036513) ASIC2 (ENSRROG00000036757) Golden snub-nosed monkey MODERN SPECIES 2758 ADAM23 (ENSRROG00000036437) ZDBF2 (ENSRROG00000032109) ENSRROG00000038360 CMKLR2 (ENSRROG00000015659) ENSRROG00000041925 NDUFS1 (ENSRROG00000033953) INO80D (ENSRROG00000003571) NRP2 (ENSRROG00000040911) PARD3B (ENSRROG00000013717) ICOS (ENSRROG00000038288) CTLA4 (ENSRROG00000028565) ENSRROG00000034095 CD28 (ENSRROG00000043826) ENSRROG00000034411 #22 ENSRROG00000006311 RAPH1 (ENSRROG00000010278) ABI2 (ENSRROG00000040959) CYP20A1 (ENSRROG00000040044) NBEAL1 (ENSRROG00000015491) CARF (ENSRROG00000045180) Cercopithecinae ANCESTRAL SPECIES 4 ENSGT00440000033742.a.b ENSGT01000000215472 ENSGT00390000007384 ENSGT00390000016493.b.b ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00490000044407 ENSGT00940000155641 ENSGT00390000006548.b.k.lb ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000017697.a.m.b ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062.m ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01100000263482.F ENSGT00390000003008 ENSGT00940000158479 Vervet Monkey MODERN SPECIES 7 RAB11FIP4 (ENSCSAG00000006613) ENSCSAG00000006606 COPRS (ENSCSAG00000006603) UTP6 (ENSCSAG00000006595) SUZ12 (ENSCSAG00000006586) CRLF3 (ENSCSAG00000006577) ATAD5 (ENSCSAG00000006541) TEFM (ENSCSAG00000006512) ADAP2 (ENSCSAG00000006503) RNF135 (ENSCSAG00000006495) ENSCSAG00000000559 RHOT1 (ENSCSAG00000006465) RHBDL3 (ENSCSAG00000006421) #20 ENSCSAG00000000558 C17orf75 (ENSCSAG00000006408) #21 ZNF207 (ENSCSAG00000006379) #22 PSMD11 (ENSCSAG00000006373) ENSCSAG00000000557 CDK5R1 (ENSCSAG00000006370) MYO1D (ENSCSAG00000006369) TMEM98 (ENSCSAG00000006365) SPACA3 (ENSCSAG00000006362) ASIC2 (ENSCSAG00000006357) CCL2 (ENSCSAG00000006354) CCL11 (ENSCSAG00000006352) CCL8 (ENSCSAG00000006350) CCL13 (ENSCSAG00000006348) CCL1 (ENSCSAG00000006347) ENSCSAG00000006343 TMEM132E (ENSCSAG00000006340) CCT6B (ENSCSAG00000006334) Cercopithecinae_a ANCESTRAL SPECIES 4 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT01000000215472 ENSGT00390000007384 ENSGT00390000016493.b.b ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00390000006548.b.k.lb ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000017697.a.m.b ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062.m ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01100000263482.F ENSGT00940000158479 ENSGT00940000156339 Macaca ANCESTRAL SPECIES 4 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00910000148586 ENSGT01000000215472 ENSGT00390000007384 ENSGT00390000016493.b.b ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481.m #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062.m ENSGT00940000161810 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01100000263482.F ENSGT00940000158479 ENSGT00940000156339 Macaca_a ANCESTRAL SPECIES 4 ENSGT00440000033742.a.b ENSGT00910000148586 ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.a.b.a.a.a.a.b.c.b ENSGT01040000240755.A.b.a.a ENSGT00390000007384 ENSGT00390000016493.b.b ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481.m #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062.m ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01100000263482.F ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 Crab-eating macaque MODERN SPECIES 7 ENSMFAG00000047784 ENSMFAG00000064943 ENSMFAG00000063616 COPRS (ENSMFAG00000030359) UTP6 (ENSMFAG00000038842) SUZ12 (ENSMFAG00000040091) CRLF3 (ENSMFAG00000044393) ATAD5 (ENSMFAG00000039082) ENSMFAG00000063937 TEFM (ENSMFAG00000001938) ENSMFAG00000059379 RNF135 (ENSMFAG00000002510) RHOT1 (ENSMFAG00000034504) C17orf75 (ENSMFAG00000000431) #21 ENSMFAG00000048628 #21 ZNF207 (ENSMFAG00000001904) #22 RHBDL3 (ENSMFAG00000041020) #20 ENSMFAG00000057242 PSMD11 (ENSMFAG00000039747) ENSMFAG00000048750 MYO1D (ENSMFAG00000033021) ENSMFAG00000055833 TMEM98 (ENSMFAG00000000693) SPACA3 (ENSMFAG00000001727) ASIC2 (ENSMFAG00000007668) ENSMFAG00000059870 ENSMFAG00000053189 CCL2 (ENSMFAG00000053406) CCL7 (ENSMFAG00000031903) CCL11 (ENSMFAG00000060137) CCL8 (ENSMFAG00000041874) Rhesus MODERN SPECIES 7 ENSMMUG00000051206 ENSMMUG00000058961 COPRS (ENSMMUG00000057946) UTP6 (ENSMMUG00000020403) SUZ12 (ENSMMUG00000001116) CRLF3 (ENSMMUG00000009069) ATAD5 (ENSMMUG00000040177) TEFM (ENSMMUG00000052827) ADAP2 (ENSMMUG00000009077) RNF135 (ENSMMUG00000007967) RHOT1 (ENSMMUG00000018222) RHBDL3 (ENSMMUG00000003158) #20 ENSMMUG00000054531 ENSMMUG00000058431 C16H17orf75 (ENSMMUG00000022379) #21 ZNF207 (ENSMMUG00000016875) #22 PSMD11 (ENSMMUG00000018962) CDK5R1 (ENSMMUG00000009548) MYO1D (ENSMMUG00000014689) ENSMMUG00000059292 TMEM98 (ENSMMUG00000022356) SPACA3 (ENSMMUG00000011411) ASIC2 (ENSMMUG00000011413) ENSMMUG00000002324 ENSMMUG00000062894 CCL2 (ENSMMUG00000000288) CCL7 (ENSMMUG00000009782) CCL11 (ENSMMUG00000064793) ENSMMUG00000058490 CCL8 (ENSMMUG00000009784) CCL13 (ENSMMUG00000009785) Pig-tailed macaque DUPLICATION Pig-tailed macaque MODERN SPECIES 116 RAB11FIP4 (ENSMNEG00000035170) ENSMNEG00000018196 ENSMNEG00000000618 COPRS (ENSMNEG00000042239) UTP6 (ENSMNEG00000039480) SUZ12 (ENSMNEG00000030008) ENSMNEG00000032660 ATAD5 (ENSMNEG00000041128) TEFM (ENSMNEG00000037622) ENSMNEG00000010597 ADAP2 (ENSMNEG00000033418) RNF135 (ENSMNEG00000037190) RHOT1 (ENSMNEG00000043417) RHBDL3 (ENSMNEG00000024854) #20 C17orf75 (ENSMNEG00000043612) #21 ENSMNEG00000041308 #22 ENSMNEG00000044062 PSMD11 (ENSMNEG00000032399) CDK5R1 (ENSMNEG00000024350) MYO1D (ENSMNEG00000043394) TMEM98 (ENSMNEG00000041204) SPACA3 (ENSMNEG00000033069) ENSMNEG00000045019 ENSMNEG00000026560 ENSMNEG00000030615 ENSMNEG00000012290 ENSMNEG00000006241 CCL2 (ENSMNEG00000038921) CCL7 (ENSMNEG00000036187) CCL11 (ENSMNEG00000028877) CCL8 (ENSMNEG00000040396) Pig-tailed macaque MODERN SPECIES 409 DYTN (ENSMNEG00000038040) FAM237A (ENSMNEG00000032870) ADAM23 (ENSMNEG00000027959) ENSMNEG00000028225 ZDBF2 (ENSMNEG00000031863) ENSMNEG00000030060 NDUFS1 (ENSMNEG00000032822) INO80D (ENSMNEG00000032459) NRP2 (ENSMNEG00000039082) ENSMNEG00000031020 PARD3B (ENSMNEG00000040103) ICOS (ENSMNEG00000029598) CTLA4 (ENSMNEG00000043834) ENSMNEG00000030427 CD28 (ENSMNEG00000033642) ENSMNEG00000036304 #22 RAPH1 (ENSMNEG00000030823) ABI2 (ENSMNEG00000028519) CYP20A1 (ENSMNEG00000045164) NBEAL1 (ENSMNEG00000044041) CARF (ENSMNEG00000033105) ENSMNEG00000027411 ICA1L (ENSMNEG00000039428) FAM117B (ENSMNEG00000033073) BMPR2 (ENSMNEG00000032368) NOP58 (ENSMNEG00000012760) ENSMNEG00000041929 KIAA2012 (ENSMNEG00000030605) ENSMNEG00000029108 FZD7 (ENSMNEG00000026832) CDK15 (ENSMNEG00000043552) Cercopithecinae_b ANCESTRAL SPECIES 33 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT01000000215472 ENSGT00390000007384 ENSGT00390000016493.b.b ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00390000006548.b.k.lb ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000017697.a.m.b ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062.m ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01100000263482.F ENSGT00940000158479 ENSGT00940000156339 Olive baboon MODERN SPECIES 8 EVI2B (ENSPANG00000023110) RAB11FIP4 (ENSPANG00000023111) COPRS (ENSPANG00000023112) UTP6 (ENSPANG00000023113) SUZ12 (ENSPANG00000023097) CRLF3 (ENSPANG00000023099) ATAD5 (ENSPANG00000023096) TEFM (ENSPANG00000023094) ADAP2 (ENSPANG00000023090) ENSPANG00000035965 RNF135 (ENSPANG00000023083) RHOT1 (ENSPANG00000023084) RHBDL3 (ENSPANG00000023087) #20 ENSPANG00000016500 C17orf75 (ENSPANG00000023088) #21 ZNF207 (ENSPANG00000023027) #22 PSMD11 (ENSPANG00000023029) ENSPANG00000013718 CDK5R1 (ENSPANG00000016542) MYO1D (ENSPANG00000023030) TMEM98 (ENSPANG00000023031) SPACA3 (ENSPANG00000023033) ASIC2 (ENSPANG00000023034) CCL2 (ENSPANG00000051132) CCL7 (ENSPANG00000038856) CCL11 (ENSPANG00000023037) CCL8 (ENSPANG00000044922) CCL13 (ENSPANG00000023023) CCL1 (ENSPANG00000045394) TMEM132E (ENSPANG00000023021) CCT6B (ENSPANG00000023018) Cercopithecinae_d ANCESTRAL SPECIES 98 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT01000000215472 ENSGT00390000007384 ENSGT00390000016493.b.b ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00390000006548.b.k.lb ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000017697.a.m.b ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062.m ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01100000263482.F ENSGT00940000158479 ENSGT00940000156339 Drill DUPLICATION Drill MODERN SPECIES 1098 ATAD5 (ENSMLEG00000000078) TEFM (ENSMLEG00000042473) ADAP2 (ENSMLEG00000034044) ENSMLEG00000017585 RNF135 (ENSMLEG00000036696) RHOT1 (ENSMLEG00000035757) RHBDL3 (ENSMLEG00000032731) #20 ENSMLEG00000029859 ENSMLEG00000020349 ENSMLEG00000018149 #22 C17orf75 (ENSMLEG00000041614) #21 PSMD11 (ENSMLEG00000034425) ENSMLEG00000026829 CDK5R1 (ENSMLEG00000008724) MYO1D (ENSMLEG00000033057) TMEM98 (ENSMLEG00000043246) SPACA3 (ENSMLEG00000020226) ASIC2 (ENSMLEG00000027675) ENSMLEG00000023408 Drill MODERN SPECIES 1089 INO80D (ENSMLEG00000039669) NRP2 (ENSMLEG00000035732) ENSMLEG00000040986 PARD3B (ENSMLEG00000031270) ICOS (ENSMLEG00000007807) CTLA4 (ENSMLEG00000037639) CD28 (ENSMLEG00000037603) ENSMLEG00000004995 #22 RAPH1 (ENSMLEG00000033969) ABI2 (ENSMLEG00000040577) CYP20A1 (ENSMLEG00000034377) NBEAL1 (ENSMLEG00000032708) Sooty mangabey DUPLICATION Sooty mangabey MODERN SPECIES 145 NF1 (ENSCATG00000040392) RAB11FIP4 (ENSCATG00000035537) ENSCATG00000017519 COPRS (ENSCATG00000034499) UTP6 (ENSCATG00000034868) SUZ12 (ENSCATG00000045058) CRLF3 (ENSCATG00000033888) ATAD5 (ENSCATG00000044730) TEFM (ENSCATG00000044869) ADAP2 (ENSCATG00000032362) RNF135 (ENSCATG00000010095) RHOT1 (ENSCATG00000036450) ENSCATG00000038442 RHBDL3 (ENSCATG00000038200) #20 C17orf75 (ENSCATG00000016130) #21 ENSCATG00000031958 #22 PSMD11 (ENSCATG00000043638) CDK5R1 (ENSCATG00000019620) MYO1D (ENSCATG00000040334) TMEM98 (ENSCATG00000039721) SPACA3 (ENSCATG00000029915) ASIC2 (ENSCATG00000035584) CCL2 (ENSCATG00000043802) CCL7 (ENSCATG00000038886) CCL11 (ENSCATG00000037948) CCL8 (ENSCATG00000039815) CCL13 (ENSCATG00000037447) CCL1 (ENSCATG00000043758) TMEM132E (ENSCATG00000035833) ZNF830 (ENSCATG00000002410) CCT6B (ENSCATG00000039984) Sooty mangabey MODERN SPECIES 570 FASTKD2 (ENSCATG00000038647) MDH1B (ENSCATG00000035467) DYTN (ENSCATG00000035275) FAM237A (ENSCATG00000036777) ADAM23 (ENSCATG00000043626) ENSCATG00000037624 ZDBF2 (ENSCATG00000037091) ENSCATG00000037736 NDUFS1 (ENSCATG00000037259) INO80D (ENSCATG00000044654) NRP2 (ENSCATG00000032051) PARD3B (ENSCATG00000022284) ICOS (ENSCATG00000043591) CTLA4 (ENSCATG00000036235) CD28 (ENSCATG00000043017) ENSCATG00000043923 #22 RAPH1 (ENSCATG00000044686) ABI2 (ENSCATG00000038300) CYP20A1 (ENSCATG00000034415) NBEAL1 (ENSCATG00000036478) CARF (ENSCATG00000035061) ENSCATG00000035496 ICA1L (ENSCATG00000036911) FAM117B (ENSCATG00000033570) ENSCATG00000033526 BMPR2 (ENSCATG00000033192) NOP58 (ENSCATG00000037684) ENSCATG00000035585 ENSCATG00000033452 KIAA2012 (ENSCATG00000034304) FZD7 (ENSCATG00000004913) Platyrrhini ANCESTRAL SPECIES 1 ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493.b.b ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a.i ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 Mas night monkey MODERN SPECIES 416 ENSANAG00000023634 ENSANAG00000021368 UTP6 (ENSANAG00000034603) ENSANAG00000019084 ENSANAG00000035949 SUZ12 (ENSANAG00000025936) CRLF3 (ENSANAG00000026772) ATAD5 (ENSANAG00000038293) ENSANAG00000030251 TEFM (ENSANAG00000037987) ADAP2 (ENSANAG00000020704) RNF135 (ENSANAG00000020022) ENSANAG00000029584 RHBDL3 (ENSANAG00000027744) #20 C17orf75 (ENSANAG00000032338) #21 ZNF207 (ENSANAG00000033773) #22 PSMD11 (ENSANAG00000021703) CDK5R1 (ENSANAG00000012728) MYO1D (ENSANAG00000036261) ENSANAG00000037868 TMEM98 (ENSANAG00000038126) SPACA3 (ENSANAG00000035068) ASIC2 (ENSANAG00000001281) CCL2 (ENSANAG00000037893) CCL7 (ENSANAG00000022972) CCL11 (ENSANAG00000025265) CCL8 (ENSANAG00000023316) ENSANAG00000034079 CCL1 (ENSANAG00000023858) TMEM132E (ENSANAG00000029169) ENSANAG00000006396 Cebidae ANCESTRAL SPECIES 10 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493.b.a ENSGT00390000016493.b.b ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a.i ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 Marmoset MODERN SPECIES 17 NF1 (ENSCJAG00000013924) RAB11FIP4 (ENSCJAG00000014099) ENSCJAG00000014106 COPRS (ENSCJAG00000014110) UTP6 (ENSCJAG00000014115) SUZ12 (ENSCJAG00000014133) ENSCJAG00000085031 CRLF3 (ENSCJAG00000039568) ENSCJAG00000078212 ATAD5 (ENSCJAG00000014179) TEFM (ENSCJAG00000014201) RNF135 (ENSCJAG00000014210) RHOT1 (ENSCJAG00000014248) RHBDL3 (ENSCJAG00000014342) #20 C17orf75 (ENSCJAG00000014362) #21 ZNF207 (ENSCJAG00000014376) #22 PSMD11 (ENSCJAG00000014450) CDK5R1 (ENSCJAG00000047608) MYO1D (ENSCJAG00000014516) TMEM98 (ENSCJAG00000014550) SPACA3 (ENSCJAG00000014561) ENSCJAG00000051816 ASIC2 (ENSCJAG00000014568) CCL7 (ENSCJAG00000062725) CCL2 (ENSCJAG00000057655) CCL8 (ENSCJAG00000038352) CCL13 (ENSCJAG00000042890) ENSCJAG00000076401 TMEM132E (ENSCJAG00000014632) CCT6B (ENSCJAG00000014646) ZNF830 (ENSCJAG00000058086) Cebidae_a ANCESTRAL SPECIES 1 ENSGT00940000160802 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493.b.a ENSGT00390000008040.t ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a.i ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.a.b ENSGT01060000248892 ENSGT01100000263482.F ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 Capuchin MODERN SPECIES 140 OMG (ENSCCAG00000017282) EVI2A (ENSCCAG00000028523) RAB11FIP4 (ENSCCAG00000027489) COPRS (ENSCCAG00000010505) ENSCCAG00000033318 ENSCCAG00000032928 SUZ12 (ENSCCAG00000037725) CRLF3 (ENSCCAG00000020821) ATAD5 (ENSCCAG00000023275) TEFM (ENSCCAG00000031597) ADAP2 (ENSCCAG00000019010) RNF135 (ENSCCAG00000034866) RHOT1 (ENSCCAG00000024157) RHBDL3 (ENSCCAG00000028200) #20 C17orf75 (ENSCCAG00000031556) #21 ZNF207 (ENSCCAG00000030971) #22 ENSCCAG00000030507 CDK5R1 (ENSCCAG00000001118) MYO1D (ENSCCAG00000035418) TMEM98 (ENSCCAG00000025493) SPACA3 (ENSCCAG00000036668) ASIC2 (ENSCCAG00000037205) Bolivian squirrel monkey DUPLICATION Bolivian squirrel monkey MODERN SPECIES 95 TEFM (ENSSBOG00000019565) ADAP2 (ENSSBOG00000030389) RNF135 (ENSSBOG00000030138) RHOT1 (ENSSBOG00000031085) RHBDL3 (ENSSBOG00000028127) #20 C17orf75 (ENSSBOG00000023876) #21 ZNF207 (ENSSBOG00000026038) #22 ENSSBOG00000035683 PSMD11 (ENSSBOG00000027961) ENSSBOG00000016899 CDK5R1 (ENSSBOG00000021952) MYO1D (ENSSBOG00000005563) TMEM98 (ENSSBOG00000029612) SPACA3 (ENSSBOG00000031184) ASIC2 (ENSSBOG00000032279) CCL2 (ENSSBOG00000035114) CCL7 (ENSSBOG00000033930) CCL11 (ENSSBOG00000028311) CCL8 (ENSSBOG00000018317) ENSSBOG00000032338 CCL1 (ENSSBOG00000014955) TMEM132E (ENSSBOG00000029140) Bolivian squirrel monkey MODERN SPECIES 56 MDH1B (ENSSBOG00000029880) DYTN (ENSSBOG00000026100) FAM237A (ENSSBOG00000033809) ADAM23 (ENSSBOG00000001918) ZDBF2 (ENSSBOG00000011111) ENSSBOG00000036258 NDUFS1 (ENSSBOG00000028426) INO80D (ENSSBOG00000020878) ENSSBOG00000034794 NRP2 (ENSSBOG00000035290) PARD3B (ENSSBOG00000029267) ICOS (ENSSBOG00000000744) CTLA4 (ENSSBOG00000034817) ENSSBOG00000030167 CD28 (ENSSBOG00000032327) ENSSBOG00000030839 #22 RAPH1 (ENSSBOG00000036069) ABI2 (ENSSBOG00000031443) CYP20A1 (ENSSBOG00000025384) ENSSBOG00000030482 NBEAL1 (ENSSBOG00000032563) CARF (ENSSBOG00000032523) WDR12 (ENSSBOG00000015132) ICA1L (ENSSBOG00000032973) ENSSBOG00000016073 BMPR2 (ENSSBOG00000025318) ENSSBOG00000029881 NOP58 (ENSSBOG00000020494) ENSSBOG00000030624 KIAA2012 (ENSSBOG00000034494) FZD7 (ENSSBOG00000013896) Atlantogenata ANCESTRAL SPECIES 1 ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00740000117022 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.d.a.a.a.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01100000263482.A.a.a.d.a.a.b ENSGT01100000263482.A.a.a.d.b ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 Xenarthra ANCESTRAL SPECIES ENSGT00730000111057 #22 Sloth MODERN SPECIES 13390 ZNF207 (ENSCHOG00000002574) #22 Afrotheria ANCESTRAL SPECIES 2 ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 Afrotheria_a ANCESTRAL SPECIES 2 ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00830000128449 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000161810 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.a ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 Elephant MODERN SPECIES 310 OMG (ENSLAFG00000000265) EVI2B (ENSLAFG00000000266) EVI2A (ENSLAFG00000000268) RAB11FIP4 (ENSLAFG00000027367) COPRS (ENSLAFG00000029887) UTP6 (ENSLAFG00000013008) SUZ12 (ENSLAFG00000003833) CRLF3 (ENSLAFG00000008331) ATAD5 (ENSLAFG00000016351) TEFM (ENSLAFG00000022039) ADAP2 (ENSLAFG00000004931) RNF135 (ENSLAFG00000004933) RHOT1 (ENSLAFG00000017808) RHBDL3 (ENSLAFG00000005280) #20 C17orf75 (ENSLAFG00000005282) #21 ZNF207 (ENSLAFG00000004317) #22 PSMD11 (ENSLAFG00000003739) CDK5R1 (ENSLAFG00000026055) MYO1D (ENSLAFG00000004973) TMEM98 (ENSLAFG00000011131) SPACA3 (ENSLAFG00000028131) ASIC2 (ENSLAFG00000022330) ENSLAFG00000004719 CCL8 (ENSLAFG00000013122) ENSLAFG00000002372 TMEM132E (ENSLAFG00000006799) CCT6B (ENSLAFG00000018317) ZNF830 (ENSLAFG00000030751) LIG3 (ENSLAFG00000001574) RFFL (ENSLAFG00000018323) RAD51D (ENSLAFG00000018328) Marsupialia ANCESTRAL SPECIES 2 ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.a.a ENSGT01100000263482.A.a.a.b ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339.l ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 Opossum MODERN SPECIES 1 ENSMODG00000019220 EVI2A (ENSMODG00000019218) NF1 (ENSMODG00000019215) RAB11FIP4 (ENSMODG00000019209) ENSMODG00000025696 UTP6 (ENSMODG00000019206) SUZ12 (ENSMODG00000019204) CRLF3 (ENSMODG00000019203) ATAD5 (ENSMODG00000019200) ENSMODG00000019199 ADAP2 (ENSMODG00000019196) ENSMODG00000046147 RHOT1 (ENSMODG00000019189) RHBDL3 (ENSMODG00000019180) #20 C17orf75 (ENSMODG00000019187) #21 ZNF207 (ENSMODG00000019185) #22 PSMD11 (ENSMODG00000019183) CDK5R1 (ENSMODG00000023193) MYO1D (ENSMODG00000019177) TMEM98 (ENSMODG00000049184) ENSMODG00000019169 ENSMODG00000040234 ASIC2 (ENSMODG00000019166) ENSMODG00000019163 ENSMODG00000019162 ENSMODG00000019159 ENSMODG00000019157 ENSMODG00000019155 ZNF830 (ENSMODG00000019150) CCT6B (ENSMODG00000019152) LIG3 (ENSMODG00000019147) Marsupialia_b ANCESTRAL SPECIES 1 ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.a.a ENSGT01100000263482.A.a.a.a.b.b ENSGT01100000263482.A.a.a.a.b.a ENSGT01100000263482.A.a.a.b ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339.l ENSGT00390000012151 ENSGT00940000156492 Tasmanian devil MODERN SPECIES 3 ENSSHAG00000008073 ENSSHAG00000030873 ENSSHAG00000022202 ENSSHAG00000025266 ENSSHAG00000018926 RAB11FIP4 (ENSSHAG00000018893) UTP6 (ENSSHAG00000026340) ENSSHAG00000018761 ENSSHAG00000018745 ATAD5 (ENSSHAG00000018727) TEFM (ENSSHAG00000018720) ENSSHAG00000018704 ENSSHAG00000018633 RHBDL3 (ENSSHAG00000022769) #20 C17orf75 (ENSSHAG00000029544) #21 ZNF207 (ENSSHAG00000018513) #22 PSMD11 (ENSSHAG00000018453) CDK5R1 (ENSSHAG00000025844) MYO1D (ENSSHAG00000018189) TMEM98 (ENSSHAG00000017941) ASIC2 (ENSSHAG00000017657) ENSSHAG00000014395 ENSSHAG00000027751 ENSSHAG00000023113 ENSSHAG00000013961 ENSSHAG00000013914 ENSSHAG00000013669 ENSSHAG00000013613 TMEM132E (ENSSHAG00000011259) ZNF830 (ENSSHAG00000030733) CCT6B (ENSSHAG00000022288) Diprotodontia ANCESTRAL SPECIES 5 ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.a.a ENSGT01100000263482.A.a.a.a.b.b ENSGT01100000263482.A.a.a.a.b.a ENSGT01100000263482.A.a.a.b ENSGT00940000158479 ENSGT00940000156339.l ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a Wallaby MODERN SPECIES 1784 ZNF207 (ENSMEUG00000006730) #22 Diprotodontia_a ANCESTRAL SPECIES 6 ENSGT00940000160802 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b ENSGT00390000007384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00530000063301.a.a ENSGT00390000008812.b.b ENSGT00940000157411 ENSGT00390000012062 ENSGT00940000154991.b ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a.a.a ENSGT01100000263482.A.a.a.a.b.b ENSGT01100000263482.A.a.a.a.b.a ENSGT01100000263482.A.a.a.b ENSGT00940000158479 ENSGT00940000156339.l ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a koala MODERN SPECIES 144 ENSPCIG00000027684 EVI2A (ENSPCIG00000027686) NF1 (ENSPCIG00000026862) RAB11FIP4 (ENSPCIG00000022917) ENSPCIG00000029964 UTP6 (ENSPCIG00000029968) SUZ12 (ENSPCIG00000029986) CRLF3 (ENSPCIG00000030058) ATAD5 (ENSPCIG00000030062) TEFM (ENSPCIG00000030066) ADAP2 (ENSPCIG00000030068) ENSPCIG00000030073 RHOT1 (ENSPCIG00000030079) RHBDL3 (ENSPCIG00000030090) #20 C17orf75 (ENSPCIG00000030093) #21 ZNF207 (ENSPCIG00000030098) #22 PSMD11 (ENSPCIG00000030100) CDK5R1 (ENSPCIG00000030101) ENSPCIG00000032294 MYO1D (ENSPCIG00000030103) TMEM98 (ENSPCIG00000032225) ASIC2 (ENSPCIG00000030110) ENSPCIG00000029656 ENSPCIG00000029662 ENSPCIG00000029663 ENSPCIG00000029664 ENSPCIG00000029665 TMEM132E (ENSPCIG00000027454) Common wonbat MODERN SPECIES 1007 ENSVURG00010011206 WSB1 (ENSVURG00010011219) NF1 (ENSVURG00010011260) OMG (ENSVURG00010011343) ENSVURG00010011348 EVI2A (ENSVURG00010011353) RAB11FIP4 (ENSVURG00010011362) ENSVURG00010011387 UTP6 (ENSVURG00010011399) SUZ12 (ENSVURG00010011451) CRLF3 (ENSVURG00010011676) ENSVURG00010011687 RHOT1 (ENSVURG00010011703) RHBDL3 (ENSVURG00010011748) #20 C17orf75 (ENSVURG00010011786) #21 ZNF207 (ENSVURG00010011823) #22 PSMD11 (ENSVURG00010011853) MYO1D (ENSVURG00010011871) ENSVURG00010011898 TMEM98 (ENSVURG00010011902) ASIC2 (ENSVURG00010011918) ENSVURG00010011934 ENSVURG00010011947 ENSVURG00010011968 ENSVURG00010012137 ENSVURG00010012324 ENSVURG00010012330 ENSVURG00010012349 ENSVURG00010012360 ENSVURG00010012368 ENSVURG00010012378 Platypus MODERN SPECIES 6 DGKE (ENSOANG00000010294) ENSOANG00000037692 SCPEP1 (ENSOANG00000010295) RAB11FIP4 (ENSOANG00000010296) ENSOANG00000002757 UTP6 (ENSOANG00000004279) SUZ12 (ENSOANG00000005252) CRLF3 (ENSOANG00000005253) ATAD5 (ENSOANG00000005254) TEFM (ENSOANG00000007541) ADAP2 (ENSOANG00000005260) ENSOANG00000008031 RHOT1 (ENSOANG00000008032) RHBDL3 (ENSOANG00000050010) #20 C17orf75 (ENSOANG00000039101) #21 ZNF207 (ENSOANG00000011104) #22 TEX2 (ENSOANG00000008037) ENSOANG00000008040 ENSOANG00000008041 POLG2 (ENSOANG00000008042) DDX5 (ENSOANG00000008043) ENSOANG00000008045 SMURF2 (ENSOANG00000008046) KPNA2 (ENSOANG00000008048) ENSOANG00000045659 ENSOANG00000008050 ENSOANG00000037969 NOL11 (ENSOANG00000008052) PITPNC1 (ENSOANG00000043329) PSMD12 (ENSOANG00000008054) HELZ (ENSOANG00000008056) Sauria ANCESTRAL SPECIES 30 ENSGT00940000160741 ENSGT00390000004832 ENSGT00940000156193 ENSGT00440000033742.a.b ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00960000191166 ENSGT00730000111057 #22 Archelosauria ANCESTRAL SPECIES 19 ENSGT00390000004832 ENSGT00940000156193 ENSGT00440000033742.a.b ENSGT00950000186384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00960000191166 ENSGT00730000111057 #22 ENSGT00390000013973.B ENSGT00940000159761 ENSGT00390000000463 ENSGT01070000253837 ENSGT01050000244808.A.b.b.b ENSGT00940000153759.a.b ENSGT00940000154705.A ENSGT00390000005412 ENSGT00940000155563 ENSGT01050000244891.A ENSGT00390000002361 ENSGT00940000154830 ENSGT00390000009760 ENSGT00940000160720 ENSGT00940000175870 Archosauria ANCESTRAL SPECIES 12 ENSGT00390000004832 ENSGT00940000156193 ENSGT00440000033742.a.b ENSGT00950000186384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00960000191166 ENSGT00730000111057 #22 ENSGT00390000013973.B ENSGT00940000159761 ENSGT00390000000463 ENSGT01070000253837 ENSGT01050000244808.A.b.b.b ENSGT00940000153759.a.b ENSGT00940000154705.A ENSGT00390000005412 ENSGT00940000155563 ENSGT01050000244891.A ENSGT00390000002361 ENSGT00940000154830 ENSGT00390000009760 ENSGT00940000160720 ENSGT00940000175870 Aves ANCESTRAL SPECIES 17 ENSGT00940000160741 ENSGT00390000004832 ENSGT00940000156193 ENSGT00440000033742.a.b ENSGT00950000186384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00940000156498 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00960000191166 ENSGT00730000111057 #22 ENSGT00390000013973.B ENSGT00940000159761 ENSGT00390000000463 ENSGT01070000253837 ENSGT01050000244808.A.b.b.b ENSGT00940000153759.a.b ENSGT00940000154705.A ENSGT00390000005412 ENSGT00940000155563 ENSGT01050000244891.A ENSGT00390000002361 ENSGT00940000154830 ENSGT00390000009760 ENSGT00940000160720 ENSGT00940000175870 Neognathae ANCESTRAL SPECIES 17 ENSGT00390000004832 ENSGT00940000156193 ENSGT00440000033742.a.b ENSGT00950000186384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00940000156498 ENSGT00960000190852 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00960000191166 ENSGT00730000111057 #22 ENSGT00390000013973.B ENSGT00940000159761 ENSGT00390000000463 ENSGT01070000253837 ENSGT01050000244808.A.b.b.b ENSGT00940000153759.a.b ENSGT00940000154705.A ENSGT00390000005412 ENSGT00940000155563 ENSGT01050000244891.A ENSGT00390000002361 ENSGT00940000154830 ENSGT00390000009760 ENSGT00940000160720 ENSGT00940000163128.a Galloanserae ANCESTRAL SPECIES 19 ENSGT00390000004832 ENSGT00940000156193 ENSGT00440000033742.a.b ENSGT00950000186384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00940000156498 ENSGT00960000190852 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00960000191166 ENSGT00730000111057 #22 ENSGT00390000013973.B ENSGT00940000159761 ENSGT00390000000463 ENSGT01070000253837 ENSGT01050000244808.A.b.b.b ENSGT00940000153759.a.b ENSGT00940000154705.A ENSGT00390000005412 ENSGT00940000155563 ENSGT01050000244891.A ENSGT00390000002361 ENSGT00940000154830 ENSGT00390000009760 ENSGT00940000160720 ENSGT00940000163128.a Anatidae ANCESTRAL SPECIES 18 ENSGT00940000156193 ENSGT00440000033742.a.b ENSGT00950000186384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00940000156498 ENSGT00960000190852 ENSGT00940000164538 ENSGT00960000191547 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00960000191166 ENSGT00730000111057 #22 ENSGT00390000013973.B ENSGT00940000159761 ENSGT00390000000463 ENSGT01050000244808.A.b.b.b ENSGT00940000153759.a.b ENSGT00940000154705.A ENSGT00390000005412 ENSGT00940000155563 ENSGT01050000244891.A ENSGT00390000002361 ENSGT00940000154830 ENSGT00390000009760 ENSGT00940000160720 ENSGT00940000163128.a ENSGT00940000153510.a Pink-footed goose MODERN SPECIES 121 TRIM25 (ENSABRG00000012560) COIL (ENSABRG00000012525) SCPEP1 (ENSABRG00000012332) RAB11FIP4 (ENSABRG00000012288) UTP6 (ENSABRG00000012088) SUZ12 (ENSABRG00000011991) CRLF3 (ENSABRG00000011925) ATAD5 (ENSABRG00000011881) ADAP2 (ENSABRG00000011690) ENSABRG00000011681 ENSABRG00000011669 ENSABRG00000011661 RHOT1 (ENSABRG00000010161) RHBDL3 (ENSABRG00000010034) #20 C17orf75 (ENSABRG00000010019) #21 ZNF207 (ENSABRG00000009954) #22 ENSABRG00000009912 ERN1 (ENSABRG00000009818) TEX2 (ENSABRG00000009764) ENSABRG00000009698 ENSABRG00000009666 POLG2 (ENSABRG00000009642) DDX5 (ENSABRG00000008564) CEP95 (ENSABRG00000008450) SMURF2 (ENSABRG00000007429) KPNA2 (ENSABRG00000007236) ENSABRG00000007230 BPTF (ENSABRG00000004387) NOL11 (ENSABRG00000004072) ENSABRG00000004058 ENSABRG00000004040 Duck MODERN SPECIES 9 SCPEP1 (ENSAPLG00000005127) RAB11FIP4 (ENSAPLG00000005346) ENSAPLG00000017131 UTP6 (ENSAPLG00000005821) SUZ12 (ENSAPLG00000006190) CRLF3 (ENSAPLG00000006471) ENSAPLG00000006584 ENSAPLG00000029046 ADAP2 (ENSAPLG00000006851) ENSAPLG00000006987 ENSAPLG00000024924 RHOT1 (ENSAPLG00000006989) RHBDL3 (ENSAPLG00000007263) #20 C17orf75 (ENSAPLG00000007375) #21 ENSAPLG00000028655 ZNF207 (ENSAPLG00000007390) #22 ENSAPLG00000001183 ERN1 (ENSAPLG00000007775) ENSAPLG00000024940 ENSAPLG00000008476 ENSAPLG00000009000 POLG2 (ENSAPLG00000009056) DDX5 (ENSAPLG00000009071) CEP95 (ENSAPLG00000009428) SMURF2 (ENSAPLG00000009867) KPNA2 (ENSAPLG00000010252) METRNL (ENSAPLG00000010666) B3GNTL1 (ENSAPLG00000010702) ZNF750 (ENSAPLG00000011661) TBCD (ENSAPLG00000010791) ENSAPLG00000011664 Phasianidae ANCESTRAL SPECIES 18 ENSGT00390000006009.a.a.a ENSGT00390000006555 ENSGT00940000158604 ENSGT00940000160741 ENSGT00390000004832 ENSGT00940000156193 ENSGT00440000033742.a.b ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00940000156498 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00940000159761 ENSGT00390000000463 ENSGT01070000253837 ENSGT01050000244808.A.b.b.b ENSGT00940000153759.a.b ENSGT00940000154705.A ENSGT00390000005412 ENSGT00940000155563 ENSGT01050000244891.A ENSGT00390000002361 ENSGT00940000154830 ENSGT00390000009760 ENSGT00940000160720 ENSGT00940000175870 ENSGT00940000163128.a Japanese quail MODERN SPECIES 9 NOG (ENSCJPG00005021404) C17orf67 (ENSCJPG00005021403) DGKE (ENSCJPG00005021402) TRIM25 (ENSCJPG00005021401) COIL (ENSCJPG00005021400) SCPEP1 (ENSCJPG00005021399) RAB11FIP4 (ENSCJPG00005021398) UTP6 (ENSCJPG00005021395) SUZ12 (ENSCJPG00005021394) CRLF3 (ENSCJPG00005021393) ATAD5 (ENSCJPG00005021392) ADAP2 (ENSCJPG00005021391) RHOT1 (ENSCJPG00005021389) RHBDL3 (ENSCJPG00005021388) #20 C17orf75 (ENSCJPG00005021387) #21 ZNF207 (ENSCJPG00005021386) #22 ERN1 (ENSCJPG00005021385) TEX2 (ENSCJPG00005021384) ENSCJPG00005021383 ENSCJPG00005021382 POLG2 (ENSCJPG00005021381) DDX5 (ENSCJPG00005021370) CEP95 (ENSCJPG00005021366) SMURF2 (ENSCJPG00005021344) KPNA2 (ENSCJPG00005021343) ENSCJPG00005021342 BPTF (ENSCJPG00005021334) NOL11 (ENSCJPG00005021317) ENSCJPG00005021316 ENSCJPG00005021315 PSMD12 (ENSCJPG00005021313) Phasianidae_b ANCESTRAL SPECIES 25 ENSGT00390000006009.a.a.a ENSGT00390000006555 ENSGT00940000158604 ENSGT00940000160741 ENSGT00390000004832 ENSGT00940000156193 ENSGT00440000033742.a.b ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00940000156498 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00940000159761 ENSGT00390000000463 ENSGT01070000253837 ENSGT01050000244808.A.b.b.b ENSGT00940000153759.a.b ENSGT00940000154705.A ENSGT00390000005412 ENSGT00940000155563 ENSGT01050000244891.A ENSGT00390000002361 ENSGT00940000154830 ENSGT00390000009760 ENSGT00940000163128.a ENSGT00940000153510.a ENSGT00940000156686 Chicken MODERN SPECIES 9 NOG (ENSGALG00010029577) C17orf67 (ENSGALG00010029578) DGKE (ENSGALG00010029581) TRIM25 (ENSGALG00010029584) SCPEP1 (ENSGALG00010029582) COIL (ENSGALG00010029586) RAB11FIP4 (ENSGALG00010029588) UTP6 (ENSGALG00010029590) SUZ12 (ENSGALG00010029591) CRLF3 (ENSGALG00010029594) ATAD5 (ENSGALG00010029596) ADAP2 (ENSGALG00010029597) RHOT1 (ENSGALG00010029600) RHBDL3 (ENSGALG00010029603) #20 C17orf75 (ENSGALG00010029605) #21 ZNF207 (ENSGALG00010029607) #22 ERN1 (ENSGALG00010029610) TEX2 (ENSGALG00010029618) PECAM1 (ENSGALG00010029625) MILR1 (ENSGALG00010029629) POLG2 (ENSGALG00010029633) DDX5 (ENSGALG00010029634) CEP95 (ENSGALG00010029306) SMURF2 (ENSGALG00010029312) KPNA2 (ENSGALG00010029317) C17orf58 (ENSGALG00010029318) BPTF (ENSGALG00010029322) NOL11 (ENSGALG00010029323) ENSGALG00010029328 PSMD12 (ENSGALG00010029202) HELZ (ENSGALG00010029204) Turkey MODERN SPECIES 12 NOG (ENSMGAG00000015423) C17orf67 (ENSMGAG00000008303) DGKE (ENSMGAG00000008277) TRIM25 (ENSMGAG00000008272) COIL (ENSMGAG00000008247) SCPEP1 (ENSMGAG00000008198) RAB11FIP4 (ENSMGAG00000008176) ENSMGAG00000008111 SUZ12 (ENSMGAG00000008085) CRLF3 (ENSMGAG00000008063) ENSMGAG00000008046 ADAP2 (ENSMGAG00000008022) RHOT1 (ENSMGAG00000007956) RHBDL3 (ENSMGAG00000007928) #20 C17orf75 (ENSMGAG00000007909) #21 ZNF207 (ENSMGAG00000007868) #22 ERN1 (ENSMGAG00000007831) TEX2 (ENSMGAG00000007790) PECAM1 (ENSMGAG00000007729) MILR1 (ENSMGAG00000007724) POLG2 (ENSMGAG00000007713) DDX5 (ENSMGAG00000007667) CEP95 (ENSMGAG00000007638) SMURF2 (ENSMGAG00000007618) KPNA2 (ENSMGAG00000007585) C17orf58 (ENSMGAG00000007583) BPTF (ENSMGAG00000007560) ENSMGAG00000007489 NOL11 (ENSMGAG00000007511) PSMD12 (ENSMGAG00000007462) HELZ (ENSMGAG00000007422) Neognathae_b ANCESTRAL SPECIES 19 ENSGT00940000160741 ENSGT00390000004832 ENSGT00940000156193 ENSGT00440000033742.a.b ENSGT00950000186384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00940000156498 ENSGT00960000190852 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00390000013973.B ENSGT00940000159761 ENSGT00390000000463 ENSGT01070000253837 ENSGT01050000244808.A.b.b.b ENSGT00940000153759.a.b ENSGT00940000154705.A ENSGT00390000005412 ENSGT00940000155563 ENSGT01050000244891.A ENSGT00390000002361 ENSGT00940000154830 ENSGT00390000009760 ENSGT00940000160720 ENSGT00940000175870 Passeriformes ANCESTRAL SPECIES 17 ENSGT00940000160741 ENSGT00390000004832 ENSGT00940000156193 ENSGT00440000033742.a.b ENSGT00950000186384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00940000156498 ENSGT00960000190852 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00390000013973.B ENSGT00940000159761 ENSGT00390000000463 ENSGT01070000253837 ENSGT01050000244808.A.b.b.b ENSGT00940000153759.a.b ENSGT00940000154705.A ENSGT00390000005412.e ENSGT00940000155563 ENSGT01050000244891.A ENSGT00390000002361 ENSGT00940000154830 ENSGT00390000009760 ENSGT00940000160720 ENSGT00940000163128.a Great tit MODERN SPECIES 8 ENSPMJG00000018080 TRIM25 (ENSPMJG00000018079) COIL (ENSPMJG00000018078) SCPEP1 (ENSPMJG00000018077) RAB11FIP4 (ENSPMJG00000018076) UTP6 (ENSPMJG00000018071) SUZ12 (ENSPMJG00000018070) CRLF3 (ENSPMJG00000018069) ATAD5 (ENSPMJG00000018068) ADAP2 (ENSPMJG00000018058) ENSPMJG00000018056 ENSPMJG00000018054 RHOT1 (ENSPMJG00000017731) RHBDL3 (ENSPMJG00000017730) #20 C17orf75 (ENSPMJG00000017729) #21 ZNF207 (ENSPMJG00000017728) #22 ENSPMJG00000017727 ERN1 (ENSPMJG00000017726) TEX2 (ENSPMJG00000017705) ENSPMJG00000017692 POLG2 (ENSPMJG00000017691) DDX5 (ENSPMJG00000017312) CEP95 (ENSPMJG00000017311) SMURF2 (ENSPMJG00000017281) KPNA2 (ENSPMJG00000017255) ENSPMJG00000017250 BPTF (ENSPMJG00000017161) NOL11 (ENSPMJG00000017159) ENSPMJG00000017158 ENSPMJG00000017157 PSMD12 (ENSPMJG00000017156) Passeriformes_d ANCESTRAL SPECIES 17 ENSGT00940000160741 ENSGT00390000004832 ENSGT00940000156193 ENSGT00440000033742.a.b ENSGT00950000186384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00940000156498 ENSGT00960000190852 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00390000013973.B ENSGT00940000159761 ENSGT00390000000463 ENSGT01070000253837 ENSGT01050000244808.A.b.b.b ENSGT00940000153759.a.b ENSGT00940000154705.A ENSGT00390000005412.f ENSGT00390000005412.e ENSGT00940000155563 ENSGT01050000244891.A ENSGT00390000002361 ENSGT00940000154830 ENSGT00390000009760 ENSGT00940000160720 Flycatcher MODERN SPECIES 8 TRIM25 (ENSFALG00000002277) COIL (ENSFALG00000002278) SCPEP1 (ENSFALG00000002280) RAB11FIP4 (ENSFALG00000002281) ENSFALG00000002282 SUZ12 (ENSFALG00000002283) CRLF3 (ENSFALG00000023105) ENSFALG00000002286 ADAP2 (ENSFALG00000002289) ENSFALG00000023506 ENSFALG00000027594 ENSFALG00000002290 RHOT1 (ENSFALG00000002293) RHBDL3 (ENSFALG00000002294) #20 C17orf75 (ENSFALG00000002298) #21 ZNF207 (ENSFALG00000002301) #22 ENSFALG00000002303 ERN1 (ENSFALG00000002305) TEX2 (ENSFALG00000002309) PECAM1 (ENSFALG00000002311) POLG2 (ENSFALG00000024702) DDX5 (ENSFALG00000002317) ENSFALG00000028319 ENSFALG00000002329 SMURF2 (ENSFALG00000002335) ENSFALG00000027352 KPNA2 (ENSFALG00000002347) C17orf58 (ENSFALG00000025611) BPTF (ENSFALG00000002353) NOL11 (ENSFALG00000002360) ENSFALG00000024321 Passeriformes_g ANCESTRAL SPECIES 20 ENSGT00940000160741 ENSGT00390000004832 ENSGT00940000156193 ENSGT00440000033742.a.b ENSGT00950000186384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00940000156498 ENSGT00960000190852 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00390000013973.B ENSGT00940000159761 ENSGT00390000000463 ENSGT01070000253837 ENSGT01050000244808.A.b.b.b ENSGT00940000153759.a.b ENSGT00940000154705.A ENSGT00390000005412.f ENSGT00390000005412.e ENSGT00940000155563 ENSGT01050000244891.A ENSGT00390000002361 ENSGT00940000154830 ENSGT00390000009760 ENSGT00940000160720 Medium ground finch MODERN SPECIES 98 DGKE (ENSGFOG00000010224) ENSGFOG00000010239 TRIM25 (ENSGFOG00000010241) COIL (ENSGFOG00000010252) SCPEP1 (ENSGFOG00000010289) RAB11FIP4 (ENSGFOG00000010302) UTP6 (ENSGFOG00000010377) SUZ12 (ENSGFOG00000010393) CRLF3 (ENSGFOG00000010409) ATAD5 (ENSGFOG00000010420) ENSGFOG00000010441 ENSGFOG00000010447 RHOT1 (ENSGFOG00000010462) RHBDL3 (ENSGFOG00000010485) #20 C17orf75 (ENSGFOG00000010489) #21 ZNF207 (ENSGFOG00000010496) #22 ENSGFOG00000010513 ERN1 (ENSGFOG00000010516) TEX2 (ENSGFOG00000010520) PECAM1 (ENSGFOG00000010528) ENSGFOG00000010566 POLG2 (ENSGFOG00000010571) DDX5 (ENSGFOG00000010584) ENSGFOG00000010735 ENSGFOG00000010741 SMURF2 (ENSGFOG00000010749) KPNA2 (ENSGFOG00000010775) ENSGFOG00000010783 BPTF (ENSGFOG00000010803) NOL11 (ENSGFOG00000010859) PITPNC1 (ENSGFOG00000010905) Passeroidea ANCESTRAL SPECIES 19 ENSGT00940000160741 ENSGT00390000004832 ENSGT00940000156193 ENSGT00440000033742.a.b ENSGT00950000186384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00940000156498 ENSGT00960000190852 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00390000013973.B ENSGT00940000159761 ENSGT00390000000463 ENSGT01070000253837 ENSGT01050000244808.A.b.b.b ENSGT00940000153759.a.b ENSGT00940000154705.A ENSGT00390000005412.e ENSGT00940000155563 ENSGT01050000244891.A ENSGT00390000002361 ENSGT00940000154830 ENSGT00390000009760 ENSGT00940000160720 ENSGT00940000175870 Common canary MODERN SPECIES 27 DGKE (ENSSCAG00000014336) TRIM25 (ENSSCAG00000014335) COIL (ENSSCAG00000014287) SCPEP1 (ENSSCAG00000014262) RAB11FIP4 (ENSSCAG00000014254) ENSSCAG00000014228 UTP6 (ENSSCAG00000014216) SUZ12 (ENSSCAG00000014176) CRLF3 (ENSSCAG00000014162) ATAD5 (ENSSCAG00000014152) ADAP2 (ENSSCAG00000014146) ENSSCAG00000014140 RHOT1 (ENSSCAG00000014126) RHBDL3 (ENSSCAG00000014114) #20 C17orf75 (ENSSCAG00000014104) #21 ZNF207 (ENSSCAG00000014094) #22 ENSSCAG00000014086 ERN1 (ENSSCAG00000014053) TEX2 (ENSSCAG00000014028) PECAM1 (ENSSCAG00000014022) ENSSCAG00000014020 POLG2 (ENSSCAG00000013994) DDX5 (ENSSCAG00000013981) CEP95 (ENSSCAG00000013970) SMURF2 (ENSSCAG00000013953) KPNA2 (ENSSCAG00000013945) ENSSCAG00000013943 BPTF (ENSSCAG00000013886) NOL11 (ENSSCAG00000013831) ENSSCAG00000013818 ENSSCAG00000013811 Zebra finch MODERN SPECIES 9 ENSTGUG00000005067 TEKT3 (ENSTGUG00000005044) PMP22 (ENSTGUG00000021788) ENSTGUG00000021621 COX10 (ENSTGUG00000005020) UTP6 (ENSTGUG00000004999) SUZ12 (ENSTGUG00000004968) CRLF3 (ENSTGUG00000004958) ATAD5 (ENSTGUG00000004944) ADAP2 (ENSTGUG00000004917) ENSTGUG00000026268 ENSTGUG00000020718 RHOT1 (ENSTGUG00000004857) RHBDL3 (ENSTGUG00000028697) #20 C17orf75 (ENSTGUG00000004819) #21 ZNF207 (ENSTGUG00000004789) #22 ENSTGUG00000004788 ERN1 (ENSTGUG00000004752) TEX2 (ENSTGUG00000004694) PECAM1 (ENSTGUG00000004687) ENSTGUG00000004666 DDX5 (ENSTGUG00000004622) CEP95 (ENSTGUG00000004601) SMURF2 (ENSTGUG00000004569) KPNA2 (ENSTGUG00000004534) C17orf58 (ENSTGUG00000004530) BPTF (ENSTGUG00000004512) NOL11 (ENSTGUG00000004491) PITPNC1 (ENSTGUG00000004478) PSMD12 (ENSTGUG00000004449) HELZ (ENSTGUG00000004401) Neognathae_c ANCESTRAL SPECIES 23 ENSGT00390000001390.a.b ENSGT00940000160741 ENSGT00390000004832 ENSGT00940000156193 ENSGT00440000033742.a.b ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00940000156498 ENSGT00960000190852 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00390000013973.B ENSGT00940000159761 ENSGT00390000000463 ENSGT01070000253837 ENSGT01050000244808.A.b.b.b ENSGT00940000153759.a.b ENSGT00940000154705.A ENSGT00390000005412 ENSGT00940000155563 ENSGT01050000244891.A ENSGT00390000002361 ENSGT00940000154830 ENSGT00390000009760 ENSGT00940000163128.a ENSGT00940000153510.a Kakapo MODERN SPECIES 8 ENSSHBG00005020973 TRIM25 (ENSSHBG00005020975) COIL (ENSSHBG00005020978) SCPEP1 (ENSSHBG00005020984) RAB11FIP4 (ENSSHBG00005020996) UTP6 (ENSSHBG00005021006) SUZ12 (ENSSHBG00005021011) ENSSHBG00005021016 ATAD5 (ENSSHBG00005021019) ADAP2 (ENSSHBG00005021022) ENSSHBG00005021024 ENSSHBG00005021025 RHOT1 (ENSSHBG00005021027) RHBDL3 (ENSSHBG00005021030) #20 C17orf75 (ENSSHBG00005021032) #21 ZNF207 (ENSSHBG00005021036) #22 ENSSHBG00005021039 ENSSHBG00005021040 ERN1 (ENSSHBG00005021046) TEX2 (ENSSHBG00005021055) PECAM1 (ENSSHBG00005021060) POLG2 (ENSSHBG00005021064) DDX5 (ENSSHBG00005021066) SMURF2 (ENSSHBG00005021068) KPNA2 (ENSSHBG00005021072) ENSSHBG00005021075 BPTF (ENSSHBG00005021077) NOL11 (ENSSHBG00005021082) ENSSHBG00005021088 PSMD12 (ENSSHBG00005021089) HELZ (ENSSHBG00005021091) Golden eagle MODERN SPECIES 21 DGKE (ENSACCG00020005649) ENSACCG00020005667 TRIM25 (ENSACCG00020005683) COIL (ENSACCG00020005697) SCPEP1 (ENSACCG00020005712) RAB11FIP4 (ENSACCG00020005737) UTP6 (ENSACCG00020005776) SUZ12 (ENSACCG00020005857) CRLF3 (ENSACCG00020005897) ATAD5 (ENSACCG00020005934) ADAP2 (ENSACCG00020005289) ENSACCG00020005304 RHOT1 (ENSACCG00020005369) RHBDL3 (ENSACCG00020005434) #20 C17orf75 (ENSACCG00020005449) #21 ZNF207 (ENSACCG00020005534) #22 ENSACCG00020005568 ERN1 (ENSACCG00020005588) TEX2 (ENSACCG00020005626) PECAM1 (ENSACCG00020005689) ENSACCG00020005734 POLG2 (ENSACCG00020005753) DDX5 (ENSACCG00020005769) CEP95 (ENSACCG00020005805) SMURF2 (ENSACCG00020005835) KPNA2 (ENSACCG00020005858) ENSACCG00020005878 BPTF (ENSACCG00020005954) NOL11 (ENSACCG00020006034) ENSACCG00020006054 PSMD12 (ENSACCG00020006075) African ostrich MODERN SPECIES 761 DGKE (ENSSCUG00000011536) TRIM25 (ENSSCUG00000011537) ENSSCUG00000011540 SCPEP1 (ENSSCUG00000011541) RAB11FIP4 (ENSSCUG00000011542) UTP6 (ENSSCUG00000011549) SUZ12 (ENSSCUG00000011554) CRLF3 (ENSSCUG00000011562) ATAD5 (ENSSCUG00000011565) ENSSCUG00000011568 ADAP2 (ENSSCUG00000011570) ENSSCUG00000011572 RHOT1 (ENSSCUG00000011574) RHBDL3 (ENSSCUG00000011577) #20 C17orf75 (ENSSCUG00000011581) #21 ZNF207 (ENSSCUG00000011586) #22 ERN1 (ENSSCUG00000011594) TEX2 (ENSSCUG00000011604) PECAM1 (ENSSCUG00000011610) ENSSCUG00000011618 POLG2 (ENSSCUG00000011626) DDX5 (ENSSCUG00000011632) CEP95 (ENSSCUG00000011636) SMURF2 (ENSSCUG00000011646) KPNA2 (ENSSCUG00000011668) C17orf58 (ENSSCUG00000011671) BPTF (ENSSCUG00000011676) NOL11 (ENSSCUG00000011681) ENSSCUG00000011684 PSMD12 (ENSSCUG00000011691) HELZ (ENSSCUG00000011716) Australian saltwater crocodile MODERN SPECIES 47 COIL (ENSCPRG00005002085) SCPEP1 (ENSCPRG00005002073) RAB11FIP4 (ENSCPRG00005002063) ENSCPRG00005002043 ENSCPRG00005002028 UTP6 (ENSCPRG00005002001) SUZ12 (ENSCPRG00005001886) CRLF3 (ENSCPRG00005001875) ATAD5 (ENSCPRG00005001869) TEFM (ENSCPRG00005001858) ADAP2 (ENSCPRG00005001848) ENSCPRG00005001843 RHOT1 (ENSCPRG00005001760) RHBDL3 (ENSCPRG00005001733) #20 C17orf75 (ENSCPRG00005001731) #21 ZNF207 (ENSCPRG00005001692) #22 ENSCPRG00005001679 ERN1 (ENSCPRG00005001569) TEX2 (ENSCPRG00005001502) PECAM1 (ENSCPRG00005001389) POLG2 (ENSCPRG00005001355) DDX5 (ENSCPRG00005000804) CEP95 (ENSCPRG00005000605) SMURF2 (ENSCPRG00005000114) KPNA2 (ENSCPRG00005000070) C17orf58 (ENSCPRG00005000065) BPTF (ENSCPRG00005018666) NOL11 (ENSCPRG00005018631) PITPNC1 (ENSCPRG00005018628) ENSCPRG00005018627 APOH (ENSCPRG00005018622) Cryptodira ANCESTRAL SPECIES 21 ENSGT00390000004832 ENSGT00940000156193 ENSGT00440000033742.a.b ENSGT00950000186384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00960000191166 ENSGT00730000111057 #22 ENSGT00390000013973.B ENSGT00940000159761 ENSGT00390000000463 ENSGT01070000253837 ENSGT01050000244808.A.b.b.b ENSGT00940000153759.a.b ENSGT00940000154705.A ENSGT00390000005412 ENSGT00940000155563 ENSGT01050000244891.A ENSGT00390000002361 ENSGT00940000154830 ENSGT00390000009760 ENSGT00940000160720 ENSGT00950000182933.B.a Testudinoidea ANCESTRAL SPECIES 14 ENSGT00390000004832 ENSGT00940000156193 ENSGT00440000033742.a.b ENSGT00950000186384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00960000191166 ENSGT00730000111057 #22 ENSGT00390000013973.B.e ENSGT00390000013973.B.f ENSGT00940000159761 ENSGT00390000000463 ENSGT01070000253837 ENSGT01050000244808.A.b.b.b ENSGT00940000153759.a.b ENSGT00940000154705.A ENSGT00390000005412 ENSGT00940000155563 ENSGT01050000244891.A ENSGT00390000002361 ENSGT00940000154830 ENSGT00390000009760 ENSGT00940000163128.a Testudinidae ANCESTRAL SPECIES 18 ENSGT00940000160741 ENSGT00390000004832 ENSGT00940000156193 ENSGT00440000033742.a.b ENSGT00950000186384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000154294.j ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00960000191166 ENSGT00730000111057 #22 ENSGT00390000013973.B.e ENSGT00390000013973.B.f ENSGT00940000159761 ENSGT00390000000463 ENSGT01070000253837 ENSGT01050000244808.A.b.b.b ENSGT00940000153759.a.b ENSGT00940000154705.A ENSGT00390000005412 ENSGT00940000155563 ENSGT01050000244891.A ENSGT00390000002361 ENSGT00940000154830 ENSGT00390000009760 ENSGT00940000163128.a Goode s thornscrub tortoise MODERN SPECIES 6 TRIM25 (ENSGEVG00005012958) COIL (ENSGEVG00005012990) SCPEP1 (ENSGEVG00005013012) RAB11FIP4 (ENSGEVG00005013052) ENSGEVG00005013319 UTP6 (ENSGEVG00005013363) SUZ12 (ENSGEVG00005013413) CRLF3 (ENSGEVG00005013459) ATAD5 (ENSGEVG00005013579) TEFM (ENSGEVG00005013617) ENSGEVG00005013633 RHOT1 (ENSGEVG00005013679) RHBDL3 (ENSGEVG00005013807) #20 C17orf75 (ENSGEVG00005013882) #21 ENSGEVG00005013918 ZNF207 (ENSGEVG00005014000) #22 ENSGEVG00005014037 ERN1 (ENSGEVG00005014226) TEX2 (ENSGEVG00005015234) PECAM1 (ENSGEVG00005015288) ENSGEVG00005015460 POLG2 (ENSGEVG00005015497) DDX5 (ENSGEVG00005015523) CEP95 (ENSGEVG00005015554) SMURF2 (ENSGEVG00005015606) KPNA2 (ENSGEVG00005015695) C17orf58 (ENSGEVG00005015723) BPTF (ENSGEVG00005015783) NOL11 (ENSGEVG00005015879) ENSGEVG00005015909 PSMD12 (ENSGEVG00005015975) Abingdon island giant tortoise MODERN SPECIES 2328 ENSCABG00000005239 TRIM25 (ENSCABG00000005236) COIL (ENSCABG00000005234) SCPEP1 (ENSCABG00000005233) RAB11FIP4 (ENSCABG00000005218) ENSCABG00000005209 UTP6 (ENSCABG00000005098) SUZ12 (ENSCABG00000004805) CRLF3 (ENSCABG00000004794) ATAD5 (ENSCABG00000004786) TEFM (ENSCABG00000004781) ENSCABG00000004779 RHOT1 (ENSCABG00000004776) RHBDL3 (ENSCABG00000004774) #20 C17orf75 (ENSCABG00000004746) #21 ZNF207 (ENSCABG00000004745) #22 ENSCABG00000004743 ENSCABG00000004738 ERN1 (ENSCABG00000004684) TEX2 (ENSCABG00000004671) PECAM1 (ENSCABG00000004618) ENSCABG00000004606 POLG2 (ENSCABG00000004568) DDX5 (ENSCABG00000004562) CEP95 (ENSCABG00000004558) SMURF2 (ENSCABG00000004546) Emydidae ANCESTRAL SPECIES 17 ENSGT00940000160741 ENSGT00390000004832 ENSGT00940000156193 ENSGT00440000033742.a.b ENSGT00950000186384 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00390000013973.B.e ENSGT00390000013973.B.f ENSGT00940000159761 ENSGT00390000000463 ENSGT01070000253837 ENSGT01050000244808.A.b.b.b ENSGT00940000153759.a.b ENSGT00940000154705.A ENSGT00390000005412 ENSGT00940000155563 ENSGT01050000244891.A ENSGT00390000002361 ENSGT00940000154830 ENSGT00390000009760 ENSGT00940000163128.a Three-toed box turtle MODERN SPECIES 90 SCPEP1 (ENSTMTG00000008698) RAB11FIP4 (ENSTMTG00000008567) ENSTMTG00000008507 UTP6 (ENSTMTG00000008500) SUZ12 (ENSTMTG00000008482) CRLF3 (ENSTMTG00000008462) ENSTMTG00000008425 ENSTMTG00000008388 TEFM (ENSTMTG00000008379) ADAP2 (ENSTMTG00000008301) ENSTMTG00000008285 ENSTMTG00000008276 RHOT1 (ENSTMTG00000006729) RHBDL3 (ENSTMTG00000006520) #20 C17orf75 (ENSTMTG00000006429) #21 ZNF207 (ENSTMTG00000006365) #22 ENSTMTG00000006353 ERN1 (ENSTMTG00000006268) TEX2 (ENSTMTG00000006199) PECAM1 (ENSTMTG00000006152) MILR1 (ENSTMTG00000006125) POLG2 (ENSTMTG00000006112) DDX5 (ENSTMTG00000006023) CEP95 (ENSTMTG00000005957) SMURF2 (ENSTMTG00000005892) KPNA2 (ENSTMTG00000005866) ENSTMTG00000005856 BPTF (ENSTMTG00000004986) NOL11 (ENSTMTG00000004827) ENSTMTG00000004788 PSMD12 (ENSTMTG00000004756) painted turtle MODERN SPECIES 696 TRIM25 (ENSCPBG00000004548) COIL (ENSCPBG00000004559) SCPEP1 (ENSCPBG00000004573) RAB11FIP4 (ENSCPBG00000004593) ENSCPBG00000004640 UTP6 (ENSCPBG00000004652) SUZ12 (ENSCPBG00000004675) CRLF3 (ENSCPBG00000004701) ATAD5 (ENSCPBG00000004712) TEFM (ENSCPBG00000004727) ADAP2 (ENSCPBG00000004739) ENSCPBG00000004765 RHOT1 (ENSCPBG00000004783) RHBDL3 (ENSCPBG00000004814) #20 C17orf75 (ENSCPBG00000004828) #21 ZNF207 (ENSCPBG00000004840) #22 PSMD11 (ENSCPBG00000004859) CDK5R1 (ENSCPBG00000004869) MYO1D (ENSCPBG00000004886) MAP3K14 (ENSCPBG00000004936) FMNL1 (ENSCPBG00000005140) ENSCPBG00000008845 ENSCPBG00000008849 HEXIM1 (ENSCPBG00000008858) ACBD4 (ENSCPBG00000008864) PLCD3 (ENSCPBG00000008873) NMT1 (ENSCPBG00000008881) DCAKD (ENSCPBG00000008885) KIF18B (ENSCPBG00000008886) GFAP (ENSCPBG00000008893) FAM187A (ENSCPBG00000008897) Chinese turtle MODERN SPECIES 1213 ENSPSIG00000008681 TRIM25 (ENSPSIG00000008687) COIL (ENSPSIG00000010602) SCPEP1 (ENSPSIG00000011271) RAB11FIP4 (ENSPSIG00000012210) UTP6 (ENSPSIG00000012435) SUZ12 (ENSPSIG00000013201) CRLF3 (ENSPSIG00000014727) ATAD5 (ENSPSIG00000014922) TEFM (ENSPSIG00000015305) ADAP2 (ENSPSIG00000015433) ENSPSIG00000015699 RHOT1 (ENSPSIG00000015772) RHBDL3 (ENSPSIG00000015947) #20 C17orf75 (ENSPSIG00000016591) #21 ZNF207 (ENSPSIG00000017296) #22 ENSPSIG00000017302 ERN1 (ENSPSIG00000017320) TEX2 (ENSPSIG00000017484) PECAM1 (ENSPSIG00000017778) ST6GAL1 (ENSPSIG00000006600) ADIPOQ (ENSPSIG00000008063) OTOS (ENSPSIG00000008113) ENSPSIG00000008211 ENSPSIG00000001915 ENSPSIG00000001917 GPC1 (ENSPSIG00000008264) ANKMY1 (ENSPSIG00000009352) DUSP28 (ENSPSIG00000009370) ENSPSIG00000009371 PARL (ENSPSIG00000009376) Lepidosauria ANCESTRAL SPECIES 28 ENSGT00940000160741 ENSGT00390000004832 ENSGT00940000156193 ENSGT00440000033742.a.b ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00940000156498 ENSGT00390000010581 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00960000191166 ENSGT00730000111057 #22 ENSGT00390000013973.B ENSGT00940000159761 ENSGT00390000000463 ENSGT01070000253837 ENSGT00940000153759.a.b ENSGT00940000154705.A ENSGT00390000005412 ENSGT00940000155563 ENSGT01050000244891.A ENSGT00390000002361 ENSGT00940000154830 ENSGT00390000009760 ENSGT00940000160720 ENSGT00940000163128.a ENSGT00940000153510.a Episquamata ANCESTRAL SPECIES 4 ENSGT00390000001390.a.b ENSGT00940000160741 ENSGT00390000004832 ENSGT00940000156193 ENSGT00440000033742.a.b ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00960000191166 ENSGT00730000111057 #22 ENSGT00940000156832 ENSGT00940000161168 ENSGT00390000002689 ENSGT00940000159891 ENSGT00390000005536 ENSGT00940000161742 ENSGT00390000001138.a ENSGT00390000012136 ENSGT00940000155969 ENSGT00940000160203 ENSGT00940000154457.a.b ENSGT00950000182825.A.a.b.a.b.a.b ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00950000182825.A.a.b.a.a ENSGT00390000007809.a Laterata ANCESTRAL SPECIES 1 ENSGT00390000001390.a.b ENSGT00940000160741 ENSGT00390000004832 ENSGT00940000156193 ENSGT00440000033742.a.b ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00960000191166 ENSGT00730000111057 #22 ENSGT00940000156832 ENSGT00940000161168 ENSGT00390000002689 ENSGT00940000159891 ENSGT00390000005536 ENSGT00940000161742 ENSGT00390000001138.a ENSGT00390000012136 ENSGT00940000155969 ENSGT00940000160203 ENSGT00940000154457.a.b ENSGT00950000182825.A.a.b.a.b.a.b ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00950000182825.A.a.b.a.a ENSGT00390000007809.a Common wall lizard MODERN SPECIES 10 TRIM25 (ENSPMRG00000006120) COIL (ENSPMRG00000006127) SCPEP1 (ENSPMRG00000006135) RAB11FIP4 (ENSPMRG00000006142) ENSPMRG00000006150 UTP6 (ENSPMRG00000006206) SUZ12 (ENSPMRG00000006432) CRLF3 (ENSPMRG00000006442) ATAD5 (ENSPMRG00000006462) TEFM (ENSPMRG00000006538) ENSPMRG00000000095 RHOT1 (ENSPMRG00000000414) RHBDL3 (ENSPMRG00000001315) #20 C17orf75 (ENSPMRG00000001329) #21 ENSPMRG00000001339 ZNF207 (ENSPMRG00000001350) #22 ENSPMRG00000001373 CD63 (ENSPMRG00000001384) ENSPMRG00000001398 RDH5 (ENSPMRG00000001409) ENSPMRG00000001428 ENSPMRG00000001437 ITGA7 (ENSPMRG00000001467) MCRS1 (ENSPMRG00000001521) KCNH3 (ENSPMRG00000001560) SPATS2 (ENSPMRG00000001654) ENSPMRG00000001705 ENSPMRG00000001714 C1QL4 (ENSPMRG00000001718) ENSPMRG00000001724 PRPH (ENSPMRG00000001731) Argentine black and white tegu MODERN SPECIES 73 UTP6 (ENSSMRG00000005854) SUZ12 (ENSSMRG00000005840) CRLF3 (ENSSMRG00000005752) ENSSMRG00000005743 ENSSMRG00000005738 TEFM (ENSSMRG00000005734) ENSSMRG00000005729 RHOT1 (ENSSMRG00000005714) RHBDL3 (ENSSMRG00000005691) #20 C17orf75 (ENSSMRG00000005678) #21 ZNF207 (ENSSMRG00000005675) #22 CD63 (ENSSMRG00000005674) RDH5 (ENSSMRG00000005649) BLOC1S1 (ENSSMRG00000005648) ITGA7 (ENSSMRG00000005635) ENSSMRG00000005634 MCRS1 (ENSSMRG00000005622) KCNH3 (ENSSMRG00000005537) ENSSMRG00000005532 SPATS2 (ENSSMRG00000005527) DNAJC22 (ENSSMRG00000005516) C1QL4 (ENSSMRG00000005513) PRPH (ENSSMRG00000005483) ENSSMRG00000005482 ENSSMRG00000005481 ENSSMRG00000005477 Toxicofera ANCESTRAL SPECIES 3 ENSGT00940000158604 ENSGT00390000001390.a.b ENSGT00940000160741 ENSGT00390000004832 ENSGT00940000156193 ENSGT00440000033742.a.b ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00940000156832 ENSGT00940000161168 ENSGT00390000002689 ENSGT00940000159891 ENSGT00390000005536 ENSGT00940000161742 ENSGT00390000001138.a ENSGT00390000012136 ENSGT00940000155969 ENSGT00940000160203 ENSGT00940000154457.a.b ENSGT00950000182825.A.a.b.a.b.a.b ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00390000007809.a ENSGT00940000161132 Elapidae ANCESTRAL SPECIES 2 ENSGT00390000006009.a.a.a ENSGT00940000158604 ENSGT00940000160741 ENSGT00390000004832 ENSGT00940000156193 ENSGT00440000033742.a.b ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00940000156832 ENSGT00940000161168.o ENSGT00940000161168.p ENSGT00390000002689 ENSGT00940000159891.k ENSGT00390000005536 ENSGT00940000161742 ENSGT00390000001138.a ENSGT00390000012136 ENSGT00940000155969 ENSGT00940000160203 ENSGT00940000154457.a.b ENSGT00940000154457.b.cb ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00390000007809.a Indian cobra MODERN SPECIES 1 NOG (ENSNNAG00000003542) DGKE (ENSNNAG00000003518) TRIM25 (ENSNNAG00000003444) COIL (ENSNNAG00000003415) SCPEP1 (ENSNNAG00000003239) RAB11FIP4 (ENSNNAG00000003168) UTP6 (ENSNNAG00000003125) SUZ12 (ENSNNAG00000003072) CRLF3 (ENSNNAG00000003042) ATAD5 (ENSNNAG00000002970) TEFM (ENSNNAG00000002942) ENSNNAG00000002932 RHOT1 (ENSNNAG00000002896) RHBDL3 (ENSNNAG00000002873) #20 C17orf75 (ENSNNAG00000002864) #21 ZNF207 (ENSNNAG00000002850) #22 CD63 (ENSNNAG00000002841) ENSNNAG00000002835 ENSNNAG00000002832 BLOC1S1 (ENSNNAG00000002828) ITGA7 (ENSNNAG00000002356) MCRS1 (ENSNNAG00000002216) KCNH3 (ENSNNAG00000002194) SPATS2 (ENSNNAG00000002172) DNAJC22 (ENSNNAG00000002160) C1QL4 (ENSNNAG00000002150) PRPH (ENSNNAG00000002128) ENSNNAG00000002114 ENSNNAG00000002086 TUBA1C (ENSNNAG00000002053) LMBR1L (ENSNNAG00000002031) Elapidae_a ANCESTRAL SPECIES 50 ENSGT00390000006009.a.a.a ENSGT00940000158604 ENSGT00940000160741 ENSGT00390000004832 ENSGT00940000156193.c ENSGT00440000033742.a.b ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481.c #21 ENSGT00730000111057 #22 ENSGT00940000156832 ENSGT00940000161168.o ENSGT00390000002689 ENSGT00940000159891.k ENSGT00940000159891.l ENSGT00390000005536 ENSGT00940000161742 ENSGT00390000001138.a ENSGT00390000012136 ENSGT00940000155969 ENSGT00940000160203 ENSGT00950000182825.A.a.b.a.b.b ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00390000007809.a ENSGT00940000161132 Acanthophiinae ANCESTRAL SPECIES 50 ENSGT00940000160741 ENSGT00390000004832 ENSGT00940000156193.c ENSGT00440000033742.a.b ENSGT00990000208885 ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00990000213934 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481.c #21 ENSGT00730000111057 #22 ENSGT00940000156832 ENSGT00940000161168.o ENSGT00390000002689 ENSGT00940000159891.k ENSGT00940000159891.l ENSGT00390000005536 ENSGT00940000161742 ENSGT00390000001138.a ENSGT00390000012136 ENSGT00940000155969 ENSGT00940000160203 ENSGT00950000182825.A.a.b.a.b.b ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00390000007809.a ENSGT00940000161132 Eastern brown snake MODERN SPECIES 51 SCPEP1 (ENSPTXG00000006705) RAB11FIP4 (ENSPTXG00000006704) ENSPTXG00000006702 ENSPTXG00000006700 UTP6 (ENSPTXG00000006698) SUZ12 (ENSPTXG00000006693) CRLF3 (ENSPTXG00000006691) ATAD5 (ENSPTXG00000006690) TEFM (ENSPTXG00000006689) ENSPTXG00000006688 ENSPTXG00000006687 RHOT1 (ENSPTXG00000006686) ENSPTXG00000006685 RHBDL3 (ENSPTXG00000006684) #20 C17orf75 (ENSPTXG00000006683) #21 ZNF207 (ENSPTXG00000006682) #22 CD63 (ENSPTXG00000006681) RDH5 (ENSPTXG00000006680) BLOC1S1 (ENSPTXG00000006679) ITGA7 (ENSPTXG00000006678) MCRS1 (ENSPTXG00000006677) KCNH3 (ENSPTXG00000006676) SPATS2 (ENSPTXG00000006675) DNAJC22 (ENSPTXG00000006674) C1QL4 (ENSPTXG00000006673) PRPH (ENSPTXG00000006672) ENSPTXG00000006671 TUBA1C (ENSPTXG00000006670) LMBR1L (ENSPTXG00000006669) DHH (ENSPTXG00000006668) RHEBL1 (ENSPTXG00000006667) Mainland tiger snake MODERN SPECIES 140 TRIM25 (ENSNSUG00000001964) COIL (ENSNSUG00000001962) SCPEP1 (ENSNSUG00000001961) RAB11FIP4 (ENSNSUG00000001945) ENSNSUG00000001940 UTP6 (ENSNSUG00000001939) SUZ12 (ENSNSUG00000001827) CRLF3 (ENSNSUG00000001819) ATAD5 (ENSNSUG00000001803) TEFM (ENSNSUG00000001801) ENSNSUG00000001798 ENSNSUG00000001797 RHOT1 (ENSNSUG00000001715) RHBDL3 (ENSNSUG00000001706) #20 C17orf75 (ENSNSUG00000001684) #21 ZNF207 (ENSNSUG00000001678) #22 CD63 (ENSNSUG00000001677) RDH5 (ENSNSUG00000001650) BLOC1S1 (ENSNSUG00000001647) ITGA7 (ENSNSUG00000001644) MCRS1 (ENSNSUG00000001593) KCNH3 (ENSNSUG00000001478) SPATS2 (ENSNSUG00000001477) DNAJC22 (ENSNSUG00000001476) C1QL4 (ENSNSUG00000001475) PRPH (ENSNSUG00000001154) Blue-lipped sea krait MODERN SPECIES 7088 ENSLLTG00000005550 #21 ZNF207 (ENSLLTG00000005534) #22 Lizard MODERN SPECIES 812 SCPEP1 (ENSACAG00000009279) ENSACAG00000036490 RAB11FIP4 (ENSACAG00000009413) ENSACAG00000041000 ENSACAG00000036355 ENSACAG00000037575 ENSACAG00000009472 SUZ12 (ENSACAG00000009504) ENSACAG00000009593 ENSACAG00000009606 TEFM (ENSACAG00000009633) ENSACAG00000009640 RHOT1 (ENSACAG00000009645) RHBDL3 (ENSACAG00000009768) #20 C17orf75 (ENSACAG00000009831) #21 ZNF207 (ENSACAG00000009864) #22 ENSACAG00000041198 CD63 (ENSACAG00000009957) RDH5 (ENSACAG00000009989) bloc1s1 (ENSACAG00000037112) ITGA7 (ENSACAG00000010030) MCRS1 (ENSACAG00000010308) KCNH3 (ENSACAG00000002637) SPATS2 (ENSACAG00000002690) DNAJC22 (ENSACAG00000015798) ENSACAG00000037132 C1QL4 (ENSACAG00000041424) PRPH (ENSACAG00000015695) ENSACAG00000038621 TUBA1A (ENSACAG00000044170) ENSACAG00000038725 tuatara MODERN SPECIES 657 RAB11FIP4 (ENSSPUG00000005329) UTP6 (ENSSPUG00000005273) SUZ12 (ENSSPUG00000005244) CRLF3 (ENSSPUG00000005228) ENSSPUG00000005223 ENSSPUG00000005218 ENSSPUG00000005208 ADAP2 (ENSSPUG00000005174) TEFM (ENSSPUG00000005161) ENSSPUG00000005139 RHOT1 (ENSSPUG00000005110) RHBDL3 (ENSSPUG00000005073) #20 ENSSPUG00000005060 #21 ENSSPUG00000005056 #21 ENSSPUG00000005047 ZNF207 (ENSSPUG00000005025) #22 ENSSPUG00000005008 ERN1 (ENSSPUG00000004797) TEX2 (ENSSPUG00000004748) PECAM1 (ENSSPUG00000004708) POLG2 (ENSSPUG00000004613) ENSSPUG00000004555 ENSSPUG00000004544 ENSSPUG00000004535 ENSSPUG00000004480 ENSSPUG00000004407 SMURF2 (ENSSPUG00000004332) Anura ANCESTRAL SPECIES 48 ENSGT00940000160741 ENSGT00390000004832 ENSGT00940000156193 ENSGT00440000033742.a.b ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00390000013973.B.b ENSGT00390000013973.B.a ENSGT00940000159761 ENSGT00390000000463 ENSGT01070000253837 ENSGT00940000153759.a.b ENSGT00940000154705.A ENSGT00390000005412 ENSGT00940000155563 ENSGT01050000244891.F ENSGT00390000002361 ENSGT00940000154830 ENSGT00390000009760 ENSGT00940000160720 ENSGT00940000153510.a Leishan spiny toad MODERN SPECIES 3 HELZ (ENSLLEG00000030556) PSMD12 (ENSLLEG00000030533) PITPNC1 (ENSLLEG00000030516) NOL11 (ENSLLEG00000030498) BPTF (ENSLLEG00000030293) ENSLLEG00000030218 ENSLLEG00000030005 SMURF2 (ENSLLEG00000029937) CEP95 (ENSLLEG00000029869) ENSLLEG00000029749 POLG2 (ENSLLEG00000029709) PECAM1 (ENSLLEG00000029667) ENSLLEG00000029645 TEX2 (ENSLLEG00000029618) ERN1 (ENSLLEG00000029537) ZNF207 (ENSLLEG00000029487) #22 ENSLLEG00000029476 ENSLLEG00000029462 ENSLLEG00000029449 ENSLLEG00000029436 ENSLLEG00000029418 C17orf75 (ENSLLEG00000029398) #21 ENSLLEG00000029374 RHBDL3 (ENSLLEG00000029338) #20 RHOT1 (ENSLLEG00000028927) ENSLLEG00000028861 ENSLLEG00000028839 ENSLLEG00000028819 ENSLLEG00000028792 TMC6 (ENSLLEG00000028743) ENSLLEG00000028697 Frog MODERN SPECIES 1 coil (ENSXETG00000041941) scpep1 (ENSXETG00000020061) ENSXETG00000049207 rab11fip4 (ENSXETG00000047529) utp6 (ENSXETG00000020057) suz12 (ENSXETG00000020055) crlf3 (ENSXETG00000020053) atad5 (ENSXETG00000025818) tefm (ENSXETG00000020052) adap2 (ENSXETG00000043318) ENSXETG00000049060 rhot1 (ENSXETG00000020040) RHBDL3 (ENSXETG00000047111) #20 ENSXETG00000045511 c17orf75 (ENSXETG00000047294) #21 znf207 (ENSXETG00000026635) #22 XB5880825 [provisional:samd9l] (ENSXETG00000037621) ern1 (ENSXETG00000049271) tex2.2 (ENSXETG00000030925) pecam1 (ENSXETG00000012570) ENSXETG00000043745 polg2 (ENSXETG00000012579) ddx5 (ENSXETG00000012580) cep95 (ENSXETG00000012584) smurf2 (ENSXETG00000012585) kpna2 (ENSXETG00000001594) C17orf58 (ENSXETG00000049345) bptf (ENSXETG00000001592) nol11 (ENSXETG00000037191) ENSXETG00000044333 ENSXETG00000001586 Coelacanth MODERN SPECIES 402 UTP6 (ENSLACG00000017158) SUZ12 (ENSLACG00000017067) CRLF3 (ENSLACG00000017008) ATAD5 (ENSLACG00000016892) TEFM (ENSLACG00000016874) ADAP2 (ENSLACG00000016830) ENSLACG00000016797 RHOT1 (ENSLACG00000016689) RHBDL3 (ENSLACG00000016395) #20 C17orf75 (ENSLACG00000022132) #21 ZNF207 (ENSLACG00000016289) #22 ERN1 (ENSLACG00000016078) TEX2 (ENSLACG00000015852) ENSLACG00000015378 ENSLACG00000015254 POLG2 (ENSLACG00000015134) DDX5 (ENSLACG00000015051) CEP95 (ENSLACG00000014850) SMURF2 (ENSLACG00000014496) kpna2 (ENSLACG00000014387) ENSLACG00000014275 BPTF (ENSLACG00000013815) NOL11 (ENSLACG00000013558) PITPNC1 (ENSLACG00000013410) PSMD12 (ENSLACG00000012075) HELZ (ENSLACG00000010742) Actinopterygii ANCESTRAL SPECIES 6 ENSGT00390000001390.a.b ENSGT00940000164979 ENSGT00940000156193 ENSGT00390000004832 ENSGT00440000033742.a.b ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00390000013973.B.g.a ENSGT00390000013973.B.g.b ENSGT00940000159761 ENSGT00390000000463 ENSGT00950000182933.B.b ENSGT00940000157338 ENSGT00390000006544 ENSGT00940000157228 ENSGT00940000156104.B ENSGT01050000244961.a.a.a ENSGT01050000244893.c.b.b ENSGT00390000007786.a ENSGT00940000167917 ENSGT00940000156686 ENSGT00940000153510.a Neopterygii ANCESTRAL SPECIES 19 ENSGT00390000001390.a.b ENSGT00940000164979 ENSGT00940000156193 ENSGT00390000004832 ENSGT00440000033742.a.b ENSGT00390000016493 ENSGT00390000012364 ENSGT00940000153469.a.b ENSGT00940000153469.a.a ENSGT00390000010581 ENSGT00940000156498 ENSGT00940000164538 ENSGT00940000155641 ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00390000013973.B.g.a ENSGT00390000013973.B.g.b ENSGT00940000159761 ENSGT00390000000463 ENSGT00950000182933.B.b ENSGT00940000157338 ENSGT00390000006544 ENSGT00940000157228 ENSGT00940000156104.B ENSGT01050000244961.a.a.a ENSGT01050000244893.c.b.b ENSGT00390000007786.a ENSGT00940000167917 ENSGT00940000156686 ENSGT00940000153510.a Osteoglossocephalai ANCESTRAL SPECIES 26 ENSGT00440000033742.a.b.c ENSGT00390000016493 ENSGT00390000012364.b ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000164538 ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00390000005481 #21 ENSGT00730000111057 #22 ENSGT00390000013973.B.g.a ENSGT01030000235061 ENSGT00940000157598 ENSGT00940000157195 ENSGT00540000073890 ENSGT00940000164904.a ENSGT00950000182895.a.a.a.b ENSGT00390000000204 ENSGT00940000157333 ENSGT00390000014620 ENSGT00940000153432.A.a ENSGT00550000074902 ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 70 ENSGT00940000158541 ENSGT00940000160081.a ENSGT00940000158476.a ENSGT00940000158604 ENSGT00940000164979 ENSGT00440000033742.a.b.c ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.b ENSGT00940000153469.a.a.k ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT01030000234583.a.b.b.f ENSGT00940000155641.h ENSGT00940000158838 #20 ENSGT00730000111057.a #22 ENSGT01030000235061.i ENSGT00940000157598.h.a ENSGT00940000157195.o ENSGT00540000073890.s ENSGT00940000164904.a ENSGT00950000182895.a.a.a.b ENSGT00940000157333 ENSGT00390000014620 ENSGT00940000153432.A.a.h ENSGT00940000158772.a ENSGT00940000157016 ENSGT00390000007779 ENSGT00940000153882.a.b.a ENSGT00530000063753.B ENSGT00530000063753.A.a Asian bonytongue MODERN SPECIES 12 cbx4 (ENSSFOG00015005789) cbx8b (ENSSFOG00015005798) ENSSFOG00015005811 dgke (ENSSFOG00015005829) trim25 (ENSSFOG00015025604) rab11fip4b (ENSSFOG00015005928) utp6 (ENSSFOG00015005978) suz12b (ENSSFOG00015005992) crlf3 (ENSSFOG00015006048) ENSSFOG00015025176 tefm (ENSSFOG00015025501) ADAP2 (ENSSFOG00015006170) ENSSFOG00015028032 RHOT1 (ENSSFOG00015006215) rhbdl3 (ENSSFOG00015006319) #20 ZNF207 (ENSSFOG00015006402) #22 cd7al (ENSSFOG00015006458) TNRC6C (ENSSFOG00015006475) SEPTIN9 (ENSSFOG00015006639) ENSSFOG00015006681 jpt1a (ENSSFOG00015006745) ENSSFOG00015006777 gga3a (ENSSFOG00015006800) mrps7 (ENSSFOG00015006856) MIF4GD (ENSSFOG00015006877) grb2b (ENSSFOG00015031812) usp43a (ENSSFOG00015006939) cfap52 (ENSSFOG00015006968) stx8 (ENSSFOG00015007012) ENSSFOG00015028341 PIK3R5 (ENSSFOG00015007040) P. kingsleyae MODERN SPECIES 45 cbx4 (ENSPKIG00000004326) cbx8b (ENSPKIG00000004344) dgke (ENSPKIG00000004381) trim25 (ENSPKIG00000004447) ENSPKIG00000004530 rab11fip4b (ENSPKIG00000004568) utp6 (ENSPKIG00000004653) suz12b (ENSPKIG00000004739) crlf3 (ENSPKIG00000004843) ATAD5 (ENSPKIG00000004953) tefm (ENSPKIG00000005125) ADAP2 (ENSPKIG00000005159) ENSPKIG00000005202 RHOT1 (ENSPKIG00000005229) rhbdl3 (ENSPKIG00000005296) #20 ZNF207 (ENSPKIG00000005356) #22 cd7al (ENSPKIG00000005388) TNRC6C (ENSPKIG00000005428) SEPTIN9 (ENSPKIG00000005519) ENSPKIG00000005569 ENSPKIG00000005598 jpt1a (ENSPKIG00000005629) ENSPKIG00000005712 gga3a (ENSPKIG00000005886) mrps7 (ENSPKIG00000005942) MIF4GD (ENSPKIG00000005974) ENSPKIG00000006001 usp43a (ENSPKIG00000006048) cfap52 (ENSPKIG00000006146) stx8 (ENSPKIG00000006210) ENSPKIG00000006232 Osteoglossiformes ANCESTRAL SPECIES 41 ENSGT00390000012364.a ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.b #22 ENSGT01030000235061.j ENSGT00940000157598.h.b ENSGT00940000157195.p ENSGT00540000073890.t ENSGT00940000164904.b ENSGT00950000182895.b.a.b ENSGT00950000182895.a.a.a.a.b ENSGT00390000000204 ENSGT00940000153432.A.a.g ENSGT00550000074902 ENSGT00940000155738 ENSGT00940000154272.B.b ENSGT00940000158772.b ENSGT00530000063753.A.b ENSGT00530000063599.A Asian bonytongue MODERN SPECIES 23 CACNG1 (ENSSFOG00015031630) PITPNC1 (ENSSFOG00015003508) ENSSFOG00015027102 BPTF (ENSSFOG00015003554) ENSSFOG00015003671 SMURF2 (ENSSFOG00015003770) ddx5 (ENSSFOG00015003802) ENSSFOG00015003855 AANAT (ENSSFOG00015003874) FBF1 (ENSSFOG00015004192) MGAT5B (ENSSFOG00015004225) SUZ12 (ENSSFOG00015004368) ENSSFOG00015004473 rhot1a (ENSSFOG00015004503) zgc:153240 (ENSSFOG00015004618) #21 ZNF207 (ENSSFOG00015004659) #22 ENSSFOG00015004722 TNRC6C (ENSSFOG00015004735) SEPTIN9 (ENSSFOG00015004877) ENSSFOG00015004918 jpt1b (ENSSFOG00015004936) sumo2b (ENSSFOG00015004943) NUP85 (ENSSFOG00015028903) NUP85 (ENSSFOG00015004969) MIF4GD (ENSSFOG00015029972) slc25a19 (ENSSFOG00015005036) GRB2 (ENSSFOG00015026279) MCHR1 (ENSSFOG00015027490) ENSSFOG00015005070 ntn1b (ENSSFOG00015005083) PIK3R6 (ENSSFOG00015005106) P. kingsleyae MODERN SPECIES 250 ENSPKIG00000006854 GPRC5D (ENSPKIG00000006830) pde6ha (ENSPKIG00000006811) ENSPKIG00000006797 ENSPKIG00000006775 ddx47 (ENSPKIG00000006718) tom1 (ENSPKIG00000006675) gcat (ENSPKIG00000006643) mcm5 (ENSPKIG00000006585) foxred2 (ENSPKIG00000006531) ankrd54 (ENSPKIG00000006491) SUZ12 (ENSPKIG00000006402) ENSPKIG00000006357 rhot1a (ENSPKIG00000006135) zgc:153240 (ENSPKIG00000006019) #21 ZNF207 (ENSPKIG00000005998) #22 Clupeocephala DUPLICATION Clupeocephala ANCESTRAL SPECIES 173 ENSGT00940000153500.a.b.e.b ENSGT00940000154873 ENSGT00940000160801 ENSGT00510000046608.A ENSGT00550000075089 ENSGT00390000018512 ENSGT00940000156193 ENSGT00390000004832 ENSGT00440000033742.a.b.d ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT00390000013973.B.g.a ENSGT01030000235061 ENSGT00940000157598 ENSGT00940000157195.m ENSGT00390000013965 ENSGT00940000164904.b ENSGT00950000182895.a.a.a.b ENSGT00390000000204 ENSGT00940000157333.b ENSGT00390000014620 ENSGT00940000153432.A.a ENSGT00550000074902 Otomorpha ANCESTRAL SPECIES 233 ENSGT00940000153500.a.b.f ENSGT00510000046608.A ENSGT00550000075089 ENSGT00940000153536.a.b.a.b ENSGT00940000158181.d ENSGT00390000018512 ENSGT00940000156193 ENSGT00390000004832 ENSGT00440000033742.a.b.d ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT01030000235061 ENSGT00940000157598 ENSGT00940000157195.m ENSGT00390000013965 Clupeiformes ANCESTRAL SPECIES 313 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT00940000157598 ENSGT00940000157195.m ENSGT00940000156051.d ENSGT00940000159428.e.b ENSGT00390000018541 ENSGT00390000010157.b ENSGT00940000160377 ENSGT01100000263525.a.b.a.b.a ENSGT00390000005830 ENSGT00940000155904 Atlantic herring MODERN SPECIES RUNDC3A (ENSCHAG00000009114) FAM117A (ENSCHAG00000009073) slc35b1 (ENSCHAG00000008733) ndufa4a (ENSCHAG00000008704) spop (ENSCHAG00000008557) NXPH3 (ENSCHAG00000008546) atp5mc3b (ENSCHAG00000008535) NGFR (ENSCHAG00000008413) ENSCHAG00000008385 suz12a (ENSCHAG00000008173) crlf3 (ENSCHAG00000008063) ENSCHAG00000007989 ADAP2 (ENSCHAG00000007891) rhot1a (ENSCHAG00000007314) zgc:153240 (ENSCHAG00000007254) #21 znf207a (ENSCHAG00000007220) #22 TNRC6C (ENSCHAG00000006628) septin9a (ENSCHAG00000006275) KHSRP (ENSCHAG00000006158) slc25a23b (ENSCHAG00000005010) timm29 (ENSCHAG00000004960) yipf2 (ENSCHAG00000004894) carm1 (ENSCHAG00000001581) si:dkey-204f11.64 (ENSCHAG00000018898) clpp (ENSCHAG00000018878) aldh3b1 (ENSCHAG00000018781) ENSCHAG00000018767 ENSCHAG00000018754 ccdc43 (ENSCHAG00000018751) ENSCHAG00000018735 ENSCHAG00000018677 Denticle herring MODERN SPECIES 17 RUNDC3A (ENSDCDG00000004935) rnf113a (ENSDCDG00000004923) ddx42 (ENSDCDG00000004861) limd2 (ENSDCDG00000004827) ENSDCDG00000004824 MAP3K3 (ENSDCDG00000004796) gfap (ENSDCDG00000004783) kcnh6a (ENSDCDG00000004768) dcaf7 (ENSDCDG00000004761) ccdc47 (ENSDCDG00000004736) suz12a (ENSDCDG00000004617) crlf3 (ENSDCDG00000004584) ENSDCDG00000004579 rhot1a (ENSDCDG00000003811) zgc:153240 (ENSDCDG00000003767) #21 znf207a (ENSDCDG00000003763) #22 septin9a (ENSDCDG00000003726) KHSRP (ENSDCDG00000003715) slc25a23b (ENSDCDG00000003245) timm29 (ENSDCDG00000003176) yipf2 (ENSDCDG00000003165) carm1 (ENSDCDG00000003109) clpp (ENSDCDG00000003083) aldh3b1 (ENSDCDG00000003070) Otophysi ANCESTRAL SPECIES 89 ENSGT01090000259993.B.c.a.a ENSGT00940000163847.b ENSGT01030000234536 ENSGT01090000259993.B.c.b.a.b ENSGT01020000230358.h.d.b.b ENSGT01050000244936 ENSGT01090000259993.A.b ENSGT00940000155904 ENSGT00390000005830 ENSGT01100000263525.a.b.a.b.a ENSGT01100000263525.a.b.a.b.b.b ENSGT00940000160377 ENSGT00390000010157.b ENSGT00390000018541 ENSGT00940000159428.e.b ENSGT00730000111057.c #22 ENSGT00940000157598 ENSGT00940000157195.m ENSGT00390000013965 ENSGT01060000249533 ENSGT00940000159384 ENSGT00650000094974.a ENSGT00940000165079.b ENSGT00940000162682.B.b ENSGT00940000157917.a.a ENSGT00530000064085.d ENSGT00530000063301.a.a.d ENSGT00390000008812.b.b.b ENSGT00940000157746.f ENSGT00940000175118 ENSGT00950000183044.a.a.a.a.b Characiphysae ANCESTRAL SPECIES 192 ENSGT00940000155904 ENSGT00390000005830 ENSGT01100000263525.a.b.a.b.a ENSGT00940000160377 ENSGT00390000010157.b ENSGT00390000018541 ENSGT00940000159428.e.b ENSGT00730000111057.c #22 ENSGT01030000235061.d ENSGT00940000157598 ENSGT00940000157195.m ENSGT01060000249533 ENSGT00940000159384 ENSGT00940000166194 ENSGT00650000094974.a ENSGT00940000165079.b ENSGT00940000162682.B.b Characiphysae_b ANCESTRAL SPECIES 152 ENSGT00940000157282 ENSGT00940000159737.d ENSGT00940000159327.u.a ENSGT01100000263659 ENSGT00940000166693 ENSGT00940000156518.B ENSGT00390000014585 ENSGT00440000038032 ENSGT00940000155904 ENSGT00390000005830 ENSGT01100000263525.a.b.a.b.a ENSGT00940000160377 ENSGT00390000010157.b ENSGT00390000018541 ENSGT00940000159428.e.b ENSGT00730000111057.c #22 ENSGT01030000235061.d ENSGT00940000157598 ENSGT00940000157195.m ENSGT01060000249533 ENSGT00940000159384 ENSGT00940000166194 ENSGT00650000094974.a ENSGT00940000165079.b ENSGT00940000162682.B.b ENSGT00390000005666 ENSGT00940000157513 ENSGT00940000159039.a ENSGT00390000004169 ENSGT00950000182961.a.a.d ENSGT00950000182983.A.a.a.a Characoidei ANCESTRAL SPECIES 165 ENSGT01090000259993.B.c.c.b.b.a.a ENSGT01020000230358.h.d.a.a.b.a.b.a ENSGT01090000259993.B.c.c.a.b ENSGT01090000259993.A.b.f ENSGT00940000163533 ENSGT01090000259993.A.b.e.b.b ENSGT01050000244936 ENSGT01090000259993.A.b.e.a ENSGT00940000155904 ENSGT00390000005830 ENSGT01100000263525.a.b.a.b.a ENSGT00940000160377 ENSGT00390000010157.b ENSGT00390000018541 ENSGT00940000159428.e.b ENSGT00730000111057.c #22 ENSGT01030000235061.d ENSGT00940000157598 ENSGT00940000157195.m ENSGT01060000249533 ENSGT00940000159384 ENSGT00940000166194 ENSGT00650000094974.a Red-bellied piranha MODERN SPECIES 607 ENSPNAG00000023477 ENSPNAG00000023486 ENSPNAG00000023498 aldh3b1 (ENSPNAG00000023507) clpp (ENSPNAG00000023545) ENSPNAG00000023564 carm1 (ENSPNAG00000023691) yipf2 (ENSPNAG00000023735) timm29 (ENSPNAG00000023740) slc25a23b (ENSPNAG00000023784) znf207a (ENSPNAG00000023813) #22 TNRC6C (ENSPNAG00000023891) Mexicana tetra MODERN SPECIES 11 ELFN2 (ENSAMXG00000025931) NACC1 (ENSAMXG00000016704) ier2a (ENSAMXG00000025160) CACNA1A (ENSAMXG00000010767) ENSAMXG00000029763 alkbh7 (ENSAMXG00000037042) gtf2f1 (ENSAMXG00000010803) ENSAMXG00000042667 aldh3b1 (ENSAMXG00000018559) clpp (ENSAMXG00000043731) ENSAMXG00000018535 carm1 (ENSAMXG00000018518) yipf2 (ENSAMXG00000040350) timm29 (ENSAMXG00000036951) slc25a23b (ENSAMXG00000041827) znf207a (ENSAMXG00000018462) #22 ENSAMXG00000029473 TNRC6C (ENSAMXG00000018418) ENSAMXG00000032273 septin9a (ENSAMXG00000034678) ENSAMXG00000040558 nmrk1 (ENSAMXG00000030319) ENSAMXG00000035699 zgc:163143 (ENSAMXG00000043069) ENSAMXG00000039569 ENSAMXG00000033978 nmrk1 (ENSAMXG00000041334) hspb9 (ENSAMXG00000024957) ENSAMXG00000030662 pyya (ENSAMXG00000036591) mpp2a (ENSAMXG00000010549) Electric eel MODERN SPECIES 87 ENSEEEG00000004268 ENSEEEG00000004269 ENSEEEG00000004272 ENSEEEG00000004273 ENSEEEG00000004275 ENSEEEG00000004279 ENSEEEG00000004280 ENSEEEG00000004281 aldh3b1 (ENSEEEG00000004287) clpp (ENSEEEG00000004404) ENSEEEG00000004406 carm1 (ENSEEEG00000004414) yipf2 (ENSEEEG00000004541) timm29 (ENSEEEG00000004562) slc25a23b (ENSEEEG00000004565) znf207a (ENSEEEG00000004566) #22 TNRC6C (ENSEEEG00000004570) septin9a (ENSEEEG00000004607) ENSEEEG00000005047 gpr183a (ENSEEEG00000005048) GPR18 (ENSEEEG00000005049) dachd (ENSEEEG00000005050) KLF5 (ENSEEEG00000005056) klf12b (ENSEEEG00000005058) TBC1D4 (ENSEEEG00000005072) lamp1b (ENSEEEG00000005128) ENSEEEG00000005129 pou2f1b (ENSEEEG00000005130) ENSEEEG00000005131 ENSEEEG00000005132 ildr2 (ENSEEEG00000005134) Channel catfish MODERN SPECIES 11 scpep1 (ENSIPUG00000001256) engase (ENSIPUG00000001237) rogdi (ENSIPUG00000001182) ENSIPUG00000001168 cog1 (ENSIPUG00000001122) rgs9a (ENSIPUG00000001100) GNA13 (ENSIPUG00000001084) ENSIPUG00000001078 ALDH3B1 (ENSIPUG00000001062) clpp (ENSIPUG00000001054) ENSIPUG00000001049 carm1 (ENSIPUG00000000942) yipf2 (ENSIPUG00000000909) c2h19orf52 (ENSIPUG00000000894) slc25a23b (ENSIPUG00000000880) znf207a (ENSIPUG00000000865) #22 ENSIPUG00000000853 TNRC6C (ENSIPUG00000000818) septin9a (ENSIPUG00000000769) tac4 (ENSIPUG00000000748) prkar1b (ENSIPUG00000000724) HEATR2 (ENSIPUG00000000696) zgc:77748 (ENSIPUG00000000689) mettl23 (ENSIPUG00000000688) MFSD11 (ENSIPUG00000000657) ENSIPUG00000000645 foxj1-a (ENSIPUG00000000641) ENSIPUG00000000633 ENSIPUG00000000627 ENSIPUG00000000612 ENSIPUG00000000601 Cyprinoidei ANCESTRAL SPECIES 1 ENSGT01030000234536.e.a.b ENSGT01020000230358.h.d.b.a.a ENSGT01090000259993.A.b.a ENSGT01020000230358.h.d.a.a.b.a.b.b.a ENSGT01090000259993.A.a.a ENSGT01060000249462.d ENSGT01090000259993.B.c.c.a.b ENSGT01020000230358.h.d.b.a.b ENSGT00940000155904 ENSGT00390000005830 ENSGT01100000263525.a.b.a.b.b.b ENSGT00940000160377 ENSGT00390000010157.b ENSGT00390000018541 ENSGT00940000159428.e.b ENSGT00730000111057.c #22 ENSGT00940000157598 ENSGT00940000157195.m ENSGT00390000013965.a ENSGT00940000159384 ENSGT00940000165079.b.f ENSGT00940000162682.B.b ENSGT00940000157917.a.b ENSGT00530000064085.d ENSGT00530000063301.a.a.d ENSGT00390000008812.b.b.b ENSGT00940000157746.f ENSGT00940000155223.a.a ENSGT00390000003628.a.b ENSGT00940000155217.p.a ENSGT01050000244893.c.a.a.a Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 22 ENSGT01090000259993.D.b.c.a ENSGT00940000166711.b ENSGT00940000156054.d.j.b ENSGT00940000157282.i ENSGT00940000159737.d.a ENSGT00940000159327.u.a.a.b ENSGT01100000263659.a ENSGT00940000156518.B.c.a ENSGT00390000014585.d ENSGT00440000038032.e ENSGT01100000263525.a.b.a.b.b.b.a ENSGT00940000160377.i ENSGT00390000010157.b.a ENSGT00390000018541.b ENSGT00940000159428.e.b.b ENSGT00730000111057.c.a #22 ENSGT00940000157598.j ENSGT00940000157195.m.a ENSGT01060000249533.d ENSGT00940000159384.f ENSGT00940000165079.b.f ENSGT00940000162682.B.b ENSGT00940000157917.a.b.a ENSGT00530000064085.d.g ENSGT00530000063301.a.a.d.b ENSGT00390000008812.b.b.b.g.b ENSGT00940000157746.f.a ENSGT00940000155223.a.a.a ENSGT00390000003628.a.b.b ENSGT00940000155217.p.a.b ENSGT01050000244893.c.a.a.a.b Goldfish MODERN SPECIES 22 NACC1 (ENSCARG00000025093) ier2a (ENSCARG00000025080) CACNA1A (ENSCARG00000010966) gtf2f1 (ENSCARG00000010355) ENSCARG00000010317 ENSCARG00000010309 ENSCARG00000010276 ENSCARG00000010263 ENSCARG00000010260 clpp (ENSCARG00000010245) si:dkey-204f11.64 (ENSCARG00000010235) carm1 (ENSCARG00000008834) yipf2 (ENSCARG00000008755) timm29 (ENSCARG00000008750) slc25a23b (ENSCARG00000008744) znf207a (ENSCARG00000008736) #22 TNRC6C (ENSCARG00000008530) septin9a (ENSCARG00000008267) si:ch211-165d12.4 (ENSCARG00000008213) nmrk1 (ENSCARG00000008207) ENSCARG00000008197 dlx4a (ENSCARG00000008193) dusp3b (ENSCARG00000008187) thraa (ENSCARG00000007129) nsfa (ENSCARG00000006182) psmd11a (ENSCARG00000006016) cdk5r1a (ENSCARG00000005995) ENSCARG00000005951 CA10 (ENSCARG00000005907) smarce1 (ENSCARG00000005867) prkcbb (ENSCARG00000005071) Cyprininae_a ANCESTRAL SPECIES 137 ENSGT01100000263525.a.b.a.b.b.b.a ENSGT00940000160377.i ENSGT00390000010157.b.a ENSGT00390000018541.b ENSGT00940000159428.e.b.b ENSGT00730000111057.c.a #22 ENSGT00940000157598.j ENSGT00940000157195.m.a ENSGT01060000249533.d ENSGT00940000159384.f ENSGT00940000165079.b.f ENSGT00940000162682.B.b ENSGT00940000157917.a.b.a ENSGT00530000064085.d.g ENSGT00530000063301.a.a.d.b ENSGT00390000008812.b.b.b.g.b ENSGT00940000157746.f.a ENSGT00940000155223.a.a.a ENSGT00390000003628.a.b.b ENSGT00940000155217.p.a.b ENSGT01050000244893.c.a.a.a.b Common carp reference MODERN SPECIES 3 ENSCCRG00000018221 ENSCCRG00000057632 ENSCCRG00000018225 ENSCCRG00000018226 ENSCCRG00000060237 ENSCCRG00000080706 ENSCCRG00000062579 ENSCCRG00000053974 si:dkey-204f11.64 (ENSCCRG00000066916) clpp (ENSCCRG00000077072) carm1 (ENSCCRG00000029475) yipf2 (ENSCCRG00000052734) timm29 (ENSCCRG00000052735) slc25a23b (ENSCCRG00000074490) ENSCCRG00000057995 znf207a (ENSCCRG00000055654) #22 septin9a (ENSCCRG00000046560) ENSCCRG00000068187 nmrk1 (ENSCCRG00000054757) dlx4a (ENSCCRG00000020191) dusp3b (ENSCCRG00000020194) thraa (ENSCCRG00000046962) nsfa (ENSCCRG00000045657) cdk5r1a (ENSCCRG00000063015) psmd11a (ENSCCRG00000011048) ENSCCRG00000052737 ENSCCRG00000052739 smarce1 (ENSCCRG00000080951) prkcbb (ENSCCRG00000076757) ENSCCRG00000071979 rbbp6 (ENSCCRG00000066900) Golden-line barbel MODERN SPECIES 126 ENSSGRG00000054040 ENSSGRG00000054039 ENSSGRG00000054038 ENSSGRG00000054037 ENSSGRG00000054036 ENSSGRG00000054035 clpp (ENSSGRG00000054034) ENSSGRG00000054032 si:dkey-204f11.64 (ENSSGRG00000054031) carm1 (ENSSGRG00000054020) yipf2 (ENSSGRG00000054019) slc25a23b (ENSSGRG00000053949) znf207a (ENSSGRG00000053944) #22 TNRC6C (ENSSGRG00000053940) septin9a (ENSSGRG00000053926) zgc:163143 (ENSSGRG00000053919) ENSSGRG00000053917 dlx4a (ENSSGRG00000053915) dusp3b (ENSSGRG00000053914) thraa (ENSSGRG00000053772) nsfa (ENSSGRG00000053678) psmd11a (ENSSGRG00000053659) ENSSGRG00000053654 CA10 (ENSSGRG00000053653) smarce1 (ENSSGRG00000053642) prkcbb (ENSSGRG00000053079) CACNG3 (ENSSGRG00000053060) TNRC6A (ENSSGRG00000053054) Cyprininae ANCESTRAL SPECIES 771 ENSGT00390000005830.d.a.b ENSGT01100000263525.a.b.a.b.b.b.b ENSGT00940000160377.j ENSGT00390000010157.b.b ENSGT00390000018541.a ENSGT00940000159428.e.b.a ENSGT00730000111057.c.b #22 ENSGT00940000157598.i ENSGT00940000157195.m.b ENSGT00390000013965.a.a Goldfish DUPLICATION Goldfish MODERN SPECIES 20 ENSCARG00000018405 ENSCARG00000018409 ENSCARG00000018414 ENSCARG00000018417 ENSCARG00000018424 ENSCARG00000018432 ENSCARG00000018436 ENSCARG00000018440 aldh3b1 (ENSCARG00000018455) clpp (ENSCARG00000018509) si:dkey-204f11.64 (ENSCARG00000018529) carm1 (ENSCARG00000018587) yipf2 (ENSCARG00000019705) timm29 (ENSCARG00000019713) slc25a23b (ENSCARG00000019729) znf207a (ENSCARG00000019908) #22 ENSCARG00000019952 septin9a (ENSCARG00000020101) prrg2 (ENSCARG00000021202) rras (ENSCARG00000021232) AP2A1 (ENSCARG00000021331) prmt1 (ENSCARG00000022166) ENSCARG00000025827 prl (ENSCARG00000025840) ENSCARG00000025859 ENSCARG00000025866 ccdc103 (ENSCARG00000025879) ENSCARG00000025905 ENSCARG00000025919 gtpbp1 (ENSCARG00000025975) sgsm3 (ENSCARG00000026262) Goldfish MODERN SPECIES 268 slc25a23b (ENSCARG00000065414) znf207a (ENSCARG00000065398) #22 Cyprininae_a ANCESTRAL SPECIES 266 ENSGT01090000259993.A.b.b ENSGT00940000155904 ENSGT00390000005830.c ENSGT01100000263525.a.b.a.b.b.b.b ENSGT00940000160377.j ENSGT00390000010157.b.b ENSGT00390000018541.a ENSGT00940000159428.e.b.a ENSGT00730000111057.c.b #22 ENSGT00940000157598.i ENSGT00940000157195.m.b ENSGT00390000013965.a.a ENSGT00940000159384.e ENSGT00940000166194.e.a ENSGT01060000249533.c ENSGT00940000165079.b.e ENSGT00940000157917.a.b.b ENSGT00530000064085.d.h ENSGT00530000063301.a.a.d.a ENSGT00390000008812.b.b.b.g.a ENSGT00940000157746.f.b ENSGT00940000155223.a.a.b ENSGT00390000003628.a.b.a ENSGT00940000155217.p.a.a Common carp reference MODERN SPECIES 1 ENSCCRG00000066969 ENSCCRG00000059955 ENSCCRG00000075322 ENSCCRG00000068970 ENSCCRG00000072410 ENSCCRG00000061649 ENSCCRG00000062383 ENSCCRG00000039358 aldh3b1 (ENSCCRG00000056645) clpp (ENSCCRG00000063524) si:dkey-204f11.64 (ENSCCRG00000071084) carm1 (ENSCCRG00000052726) yipf2 (ENSCCRG00000029459) timm29 (ENSCCRG00000029454) slc25a23b (ENSCCRG00000046495) znf207a (ENSCCRG00000029078) #22 ENSCCRG00000037021 ENSCCRG00000064115 septin9a (ENSCCRG00000045753) nmrk1 (ENSCCRG00000031301) zgc:163143 (ENSCCRG00000031303) ENSCCRG00000055002 ENSCCRG00000015407 ENSCCRG00000015409 thraa (ENSCCRG00000040077) nsfa (ENSCCRG00000045219) psmd11a (ENSCCRG00000046026) cdk5r1a (ENSCCRG00000074527) ENSCCRG00000022691 ENSCCRG00000052752 smarce1 (ENSCCRG00000052746) Golden-line barbel MODERN SPECIES 301 ENSSGRG00000032550 aldh3b1 (ENSSGRG00000032551) clpp (ENSSGRG00000032553) carm1 (ENSSGRG00000032558) yipf2 (ENSSGRG00000032563) timm29 (ENSSGRG00000032609) slc25a23b (ENSSGRG00000032624) znf207a (ENSSGRG00000032715) #22 TNRC6C (ENSSGRG00000032716) septin9a (ENSSGRG00000032718) si:ch211-165d12.4 (ENSSGRG00000032755) nmrk1 (ENSSGRG00000032756) zgc:163143 (ENSSGRG00000032757) ENSSGRG00000032758 ENSSGRG00000032759 dusp3b (ENSSGRG00000032760) thraa (ENSSGRG00000032762) nsfa (ENSSGRG00000032903) psmd11a (ENSSGRG00000032990) cdk5r1a (ENSSGRG00000033350) ENSSGRG00000033352 CA10 (ENSSGRG00000033357) smarce1 (ENSSGRG00000033363) Zebrafish MODERN SPECIES 18 ENSDARG00000096345 ENSDARG00000096388 ENSDARG00000096267 ENSDARG00000096337 ENSDARG00000096394 si:dkey-204f11.3 (ENSDARG00000092616) ENSDARG00000096275 ENSDARG00000096259 aldh3b1 (ENSDARG00000013839) clpp (ENSDARG00000020679) si:dkey-204f11.64 (ENSDARG00000094695) carm1 (ENSDARG00000018698) yipf2 (ENSDARG00000021399) timm29 (ENSDARG00000037909) slc25a23b (ENSDARG00000024708) znf207a (ENSDARG00000015538) #22 TNRC6C (ENSDARG00000076847) septin9a (ENSDARG00000020235) si:ch211-165d12.4 (ENSDARG00000079353) nmrk1 (ENSDARG00000037913) zgc:163143 (ENSDARG00000076437) tac4 (ENSDARG00000096234) znfl1 (ENSDARG00000037914) dlx4a (ENSDARG00000011956) dusp3b (ENSDARG00000060130) thraa (ENSDARG00000000151) nsfa (ENSDARG00000007654) psmd11a (ENSDARG00000060150) cdk5r1a (ENSDARG00000037916) ENSDARG00000037917 CA10 (ENSDARG00000009568) Euteleosteomorpha ANCESTRAL SPECIES ENSGT00950000182933.B.a.b.a ENSGT00950000182933.B.a.b.b ENSGT00950000182849.B.c.a.b.b ENSGT00390000008063 ENSGT01100000263497.E.a.a ENSGT00390000006806 ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156051.c.a ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT00390000013973.B.g.a ENSGT01030000235061 ENSGT00940000157598 ENSGT00940000157195.m ENSGT01030000235004 ENSGT00940000164904.b ENSGT00950000182895.b.b ENSGT00390000000204 ENSGT00940000157333.b ENSGT00390000014620 ENSGT00940000153432.A.a ENSGT00550000074902 Acanthomorphata ANCESTRAL SPECIES 2 ENSGT00950000182933.B.a.b.a ENSGT00940000165523.b ENSGT00950000182849.B.c.a.b.b ENSGT01100000263497.E.a.a ENSGT00390000008063 ENSGT00390000006806 ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156051.c.a ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT00390000013973.B.g.a ENSGT00940000157598 ENSGT00940000157195.m ENSGT01030000235004 ENSGT00940000164904.b ENSGT00950000182895.a.a.a.b ENSGT00390000000204 ENSGT00940000157333.b ENSGT00390000014620 ENSGT00940000153432.A.a ENSGT00550000074902 ENSGT00940000175870 ENSGT00940000163128.a ENSGT00390000007786.a.b ENSGT01050000244893.c.b.b.b Euacanthomorphacea ANCESTRAL SPECIES 5 ENSGT00390000008063.k.a ENSGT01100000263497.E.a.a ENSGT00390000006806 ENSGT00390000008063.k.b ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156051.c.a ENSGT00940000162556.E.b.a ENSGT00940000162556.E.a ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT00390000013973.B.g.a ENSGT01030000234567.B.a.b.b ENSGT01030000234567.B.a.b.a.b.a ENSGT00940000157598 ENSGT00940000157195.m ENSGT01030000235004 ENSGT00940000164904.b ENSGT00950000182895.a.a.a.b ENSGT00390000000204 ENSGT00940000157333.b ENSGT00390000014620 ENSGT00940000153432.A.a ENSGT00550000074902 ENSGT00940000160720.b.b ENSGT00390000007786.a.b Percomorphaceae ANCESTRAL SPECIES 3 ENSGT00390000008063.k.a ENSGT01100000263497.E.a.a ENSGT00390000006806 ENSGT00390000008063.k.b ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156051.c.a ENSGT00940000162556.E.b.a ENSGT00940000162556.E.a ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT00390000013973.B.g.a ENSGT01030000234567.B.a.b.b ENSGT01030000234567.B.a.b.a.b.a ENSGT00940000157598 ENSGT00730000111690.A.a.b ENSGT00940000157195.m ENSGT01030000235004 ENSGT00940000164904.b ENSGT00950000182895.a.a.a.b ENSGT00390000000204 ENSGT00940000157333.b ENSGT00390000014620 ENSGT00940000153432.A.a ENSGT00550000074902 ENSGT00940000160720.b.b Percomorphaceae_B ANCESTRAL SPECIES 2 ENSGT00950000182849.B.c.a.b.b ENSGT00390000008063.k.a ENSGT01100000263497.E.a.a ENSGT00390000006806 ENSGT00390000008063.k.b ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156051.c.a ENSGT00940000162556.D.b.b ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT00390000013973.B.g.a ENSGT01030000234567.B.a.b.b ENSGT01030000234567.B.a.b.a.b.a ENSGT01030000237991 ENSGT00940000157598 ENSGT00940000157195.m ENSGT00730000111690.A.a.a ENSGT00730000111690.A.a.b ENSGT01030000235004 ENSGT00940000164904.b ENSGT00950000182895.a.a.a.b ENSGT00390000000204 ENSGT00940000157333.b ENSGT00390000014620 ENSGT00940000153432.A.a Percomorphaceae_C ANCESTRAL SPECIES ENSGT00950000182849.B.c.a.b.b ENSGT00390000008063.k.a ENSGT01100000263497.E.a.a ENSGT00390000006806 ENSGT00390000008063.k.b ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156051.c.a ENSGT00940000162556.D.b.b ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT00390000013973.B.g.a ENSGT01030000234567.B.a.b.b ENSGT01030000234567.B.a.b.a.b.a ENSGT01030000237991 ENSGT00940000157598 ENSGT00940000157195.m ENSGT00730000111690.A.a.a ENSGT00730000111690.A.a.b ENSGT01030000235004 ENSGT00940000164904.b ENSGT00950000182895.b.b ENSGT00390000000204 ENSGT00940000157333.b ENSGT00390000014620 ENSGT00940000153432.A.a Percomorphaceae_D ANCESTRAL SPECIES 1 ENSGT00950000182849.B.c.a.b.b ENSGT00390000008063.k.a ENSGT01100000263497.E.a.a ENSGT00390000006806 ENSGT00390000008063.k.b ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156051.c.a ENSGT00940000162556.D.b.b ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT00390000013973.B.g.a ENSGT01030000234567.B.a.b.b ENSGT01030000234567.B.a.b.a.b.a ENSGT00940000157598 ENSGT00940000157195.m ENSGT00730000111690.A.b ENSGT00730000111690.A.a.a ENSGT00730000111690.A.a.b ENSGT00940000164904.b ENSGT00950000182895.b.b ENSGT00390000000204 ENSGT00940000157333.b ENSGT00390000014620 ENSGT00940000153432.A.a ENSGT00550000074902 Anabantaria ANCESTRAL SPECIES 6 ENSGT00940000165523.b ENSGT00950000182849.B.c.a.b.b ENSGT00390000008063.k.a ENSGT01100000263497.E.a.a ENSGT00390000006806 ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156051.c.a ENSGT00940000162556.D.b.b ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT01030000234567.B.a.b.a.b.a ENSGT00940000157598 ENSGT00730000111690.A.a.a ENSGT00730000111690.A.a.b ENSGT00940000157195.m ENSGT00940000164904.b ENSGT00950000182895.b.b ENSGT00390000000204 ENSGT00940000157333.b ENSGT00390000014620 ENSGT00940000153432.A.a ENSGT00550000074902 ENSGT00940000160720.b.b ENSGT00950000183127.c.b.d.a.a.b ENSGT00940000161847.b.a.e.a.b.d Anabantoidei ANCESTRAL SPECIES 7 ENSGT00940000165523.b ENSGT00950000182849.B.c.a.b.b ENSGT00390000008063.k.a ENSGT01100000263497.E.a.a ENSGT00390000006806 ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156051.c.a ENSGT00940000162556.D.b.b ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT01030000234567.B.a.b.a.b.a ENSGT00940000157598 ENSGT00730000111690.A.a.a ENSGT00730000111690.A.a.b ENSGT00940000157195.m ENSGT00940000164904.b ENSGT00950000182895.b.b ENSGT00390000000204 ENSGT00940000157333.b ENSGT00390000014620 ENSGT00940000153432.A.a ENSGT00550000074902 ENSGT00940000160720.b.b ENSGT00950000183127.c.b.d.a.a.b ENSGT00940000161847.b.a.e.a.b.d Climbing perch MODERN SPECIES 21 ENSATEG00000024772 ENSATEG00000024771 dhps (ENSATEG00000024768) ENSATEG00000024767 ENSATEG00000024766 ENSATEG00000024761 ENSATEG00000024755 ENSATEG00000024753 rfx1a (ENSATEG00000024750) ENSATEG00000024744 ENSATEG00000024741 ENSATEG00000024736 ENSATEG00000024734 rhot1a (ENSATEG00000024726) zgc:153240 (ENSATEG00000024721) #21 znf207a (ENSATEG00000024717) #22 ENSATEG00000024713 ENSATEG00000024708 ENSATEG00000029804 ENSATEG00000028605 ENSATEG00000024698 septin9a (ENSATEG00000024685) jpt1b (ENSATEG00000024679) ENSATEG00000026342 NUP85 (ENSATEG00000024675) GGA3 (ENSATEG00000024672) MRPS7 (ENSATEG00000025510) MIF4GD (ENSATEG00000024669) ENSATEG00000024664 ENSATEG00000024658 ENSATEG00000024655 Siamese fighting fish MODERN SPECIES 19 ENSBSLG00000006143 ENSBSLG00000006145 ENSBSLG00000006149 dhps (ENSBSLG00000006517) ENSBSLG00000006914 ENSBSLG00000006936 ENSBSLG00000007002 ENSBSLG00000007417 rln3a (ENSBSLG00000007422) rfx1a (ENSBSLG00000007448) KHSRP (ENSBSLG00000007610) ENSBSLG00000007726 ENSBSLG00000007790 rhot1a (ENSBSLG00000007978) zgc:153240 (ENSBSLG00000009024) #21 znf207a (ENSBSLG00000009087) #22 ENSBSLG00000009144 TNRC6C (ENSBSLG00000009172) septin9a (ENSBSLG00000009212) ENSBSLG00000009267 ENSBSLG00000009269 ENSBSLG00000009284 ENSBSLG00000009295 ENSBSLG00000009314 ENSBSLG00000009326 NUP85 (ENSBSLG00000009392) GGA3 (ENSBSLG00000009605) mrps7 (ENSBSLG00000010267) mif4gda (ENSBSLG00000010273) slc25a19 (ENSBSLG00000010277) PITPNC1 (ENSBSLG00000010281) Zig-zag eel MODERN SPECIES 22 ENSMAMG00000025234 ENSMAMG00000023682 ENSMAMG00000023679 dhps (ENSMAMG00000023673) ENSMAMG00000023670 ENSMAMG00000023669 TNPO2 (ENSMAMG00000023658) ENSMAMG00000023654 ENSMAMG00000023651 rfx1a (ENSMAMG00000023645) ENSMAMG00000023639 ENSMAMG00000023633 ENSMAMG00000027701 rhot1a (ENSMAMG00000023627) zgc:153240 (ENSMAMG00000023624) #21 znf207a (ENSMAMG00000023620) #22 ENSMAMG00000023613 ENSMAMG00000023611 ENSMAMG00000023610 ENSMAMG00000023609 septin9a (ENSMAMG00000023602) jpt1b (ENSMAMG00000024870) ENSMAMG00000027918 NUP85 (ENSMAMG00000023593) GGA3 (ENSMAMG00000023587) MRPS7 (ENSMAMG00000025291) MIF4GD (ENSMAMG00000023584) ENSMAMG00000025059 ENSMAMG00000023579 ENSMAMG00000023573 cacng4b (ENSMAMG00000024450) Carangaria ANCESTRAL SPECIES 4 ENSGT00950000182849.B.c.a.b.b ENSGT00390000008063.k.a ENSGT01100000263497.E.a.a ENSGT00390000006806 ENSGT00390000008063.k.b ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156051.c.a ENSGT00940000162556.D.b.b ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT00390000013973.B.g.a ENSGT01030000234567.B.a.b.b ENSGT01030000234567.B.a.b.a.b.a ENSGT00940000157598 ENSGT00940000157195.m ENSGT00730000111690.A.a.a.o.a ENSGT00730000111690.A.b ENSGT00730000111690.A.a.a.p ENSGT00730000111690.A.a.b ENSGT00940000164904.b ENSGT00390000000204 ENSGT00940000157333.b ENSGT00390000014620 ENSGT00940000153432.A.a ENSGT00550000074902 Pleuronectoidei ANCESTRAL SPECIES 2 ENSGT00950000182849.B.c.a.b.b ENSGT00390000008063.k.a ENSGT01100000263497.E.a.a ENSGT00390000006806 ENSGT00390000008063.k.b ENSGT00440000038032 ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156051.c.a ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT00390000013973.B.g.a ENSGT01030000234567.B.a.b.b ENSGT01030000234567.B.a.b.a.b.a ENSGT00940000157598 ENSGT00940000157195.m ENSGT00730000111690.A.a.a.o.a ENSGT00730000111690.A.a.b ENSGT00940000164904.b ENSGT00950000182895.b.b ENSGT00390000000204 ENSGT00940000157333.b ENSGT00390000014620 ENSGT00940000153432.A.a ENSGT00550000074902 ENSGT00940000160720.b.b Turbot MODERN SPECIES 10 ENSSMAG00000030303 dhps (ENSSMAG00000011656) ENSSMAG00000011719 ENSSMAG00000011703 dhps (ENSSMAG00000011728) dhps (ENSSMAG00000021752) ENSSMAG00000011977 ENSSMAG00000012008 ENSSMAG00000012132 ENSSMAG00000012141 rfx1a (ENSSMAG00000012149) ENSSMAG00000012166 ENSSMAG00000012215 RHOT1 (ENSSMAG00000012315) zgc:153240 (ENSSMAG00000012435) #21 znf207a (ENSSMAG00000012468) #22 ENSSMAG00000012606 ENSSMAG00000012616 ENSSMAG00000012713 ENSSMAG00000012761 septin9a (ENSSMAG00000012833) ENSSMAG00000013351 ENSSMAG00000013352 ENSSMAG00000013353 jpt1b (ENSSMAG00000013368) ENSSMAG00000037403 NUP85 (ENSSMAG00000013392) GGA3 (ENSSMAG00000013486) MRPS7 (ENSSMAG00000013503) MIF4GD (ENSSMAG00000024535) ENSSMAG00000013531 Carangaria_A ANCESTRAL SPECIES 12 ENSGT00950000182849.B.c.a.b.b ENSGT00390000008063.k.a ENSGT01100000263497.E.a.a ENSGT00390000006806 ENSGT00390000008063.k.b ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156051.c.a ENSGT00940000162556.D.b.b ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT00390000013973.B.g.a ENSGT01030000234567.B.a.b.b ENSGT01030000234567.B.a.b.a.b.a ENSGT00940000157598 ENSGT00940000157195.m ENSGT00730000111690.A.a.a.o.a ENSGT00730000111690.A.a.a.p ENSGT00730000111690.A.a.b ENSGT00940000164904.b ENSGT00390000000204 ENSGT00940000157333.b ENSGT00390000014620 ENSGT00940000153432.A.a ENSGT00550000074902 ENSGT00940000160720.b.b Barramundi perch MODERN SPECIES 41 ENSLCAG00010014336 dhps (ENSLCAG00010014333) ENSLCAG00010014330 ENSLCAG00010014329 dhps (ENSLCAG00010014306) ENSLCAG00010014132 ENSLCAG00010014085 rln3a (ENSLCAG00010014082) rfx1a (ENSLCAG00010014057) KHSRP (ENSLCAG00010014044) ENSLCAG00010014038 ENSLCAG00010014029 ADAP2 (ENSLCAG00010014022) rhot1a (ENSLCAG00010013978) zgc:153240 (ENSLCAG00010013954) #21 znf207a (ENSLCAG00010013952) #22 ENSLCAG00010013944 ENSLCAG00010013941 ENSLCAG00010013930 TNRC6C (ENSLCAG00010013926) septin9a (ENSLCAG00010013913) jpt1b (ENSLCAG00010013906) ENSLCAG00010013900 NUP85 (ENSLCAG00010013898) ENSLCAG00010013892 mrps7 (ENSLCAG00010013890) mif4gda (ENSLCAG00010013887) slc25a19 (ENSLCAG00010013884) ENSLCAG00010013881 ENSLCAG00010013879 ENSLCAG00010013872 Seriola ANCESTRAL SPECIES 26 ENSGT00940000165523.b ENSGT00950000182849.B.c.a.b.b ENSGT00390000008063.k.a ENSGT01100000263497.E.a.a ENSGT00390000006806 ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156051.c.a ENSGT00940000162556.D.b.b ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT00390000013973.B.g.a ENSGT01030000234567.B.a.b.b ENSGT01030000234567.B.a.b.a.b.a ENSGT00940000157598 ENSGT00940000157195.m ENSGT00730000111690.A.a.a.o.a ENSGT00730000111690.A.a.a.o.b ENSGT00730000111690.A.a.b ENSGT00940000164904.b ENSGT00950000182895.b.b ENSGT00390000000204 ENSGT00940000157333.b ENSGT00390000014620 ENSGT00940000153432.A.a ENSGT00550000074902 Yellowtail amberjack MODERN SPECIES 3245 sstr5 (ENSSLDG00000025637) NHERF2 (ENSSLDG00000025636) dhps (ENSSLDG00000025632) ENSSLDG00000025631 ENSSLDG00000025630 ENSSLDG00000025629 ENSSLDG00000025628 rln3a (ENSSLDG00000025627) rfx1a (ENSSLDG00000025626) KHSRP (ENSSLDG00000025625) ENSSLDG00000025624 ENSSLDG00000025623 ADAP2 (ENSSLDG00000025622) rhot1a (ENSSLDG00000025619) zgc:153240 (ENSSLDG00000025618) #21 znf207a (ENSSLDG00000025617) #22 ENSSLDG00000025616 ENSSLDG00000025615 ENSSLDG00000025614 TNRC6C (ENSSLDG00000025613) ENSSLDG00000025612 ENSSLDG00000025611 ENSSLDG00000025610 septin9a (ENSSLDG00000025609) jpt1b (ENSSLDG00000025608) ENSSLDG00000025607 NUP85 (ENSSLDG00000025606) GGA3 (ENSSLDG00000025605) mrps7 (ENSSLDG00000025604) mif4gda (ENSSLDG00000025603) slc25a19 (ENSSLDG00000025602) Greater amberjack MODERN SPECIES 70 sstr5 (ENSSDUG00000001641) NHERF2 (ENSSDUG00000001661) dhps (ENSSDUG00000001702) ENSSDUG00000001728 ENSSDUG00000001741 ENSSDUG00000001767 ENSSDUG00000001938 rln3a (ENSSDUG00000001960) rfx1a (ENSSDUG00000002037) KHSRP (ENSSDUG00000002110) ENSSDUG00000002144 ENSSDUG00000002156 ADAP2 (ENSSDUG00000002190) rhot1a (ENSSDUG00000002206) zgc:153240 (ENSSDUG00000002278) #21 znf207a (ENSSDUG00000002295) #22 ENSSDUG00000002325 ENSSDUG00000002336 TNRC6C (ENSSDUG00000002366) septin9a (ENSSDUG00000002476) ENSSDUG00000002594 ENSSDUG00000002606 ENSSDUG00000002620 jpt1b (ENSSDUG00000002626) ENSSDUG00000002642 NUP85 (ENSSDUG00000002664) GGA3 (ENSSDUG00000002685) mrps7 (ENSSDUG00000002719) mif4gda (ENSSDUG00000002737) slc25a19 (ENSSDUG00000002752) PITPNC1 (ENSSDUG00000002774) Eupercaria ANCESTRAL SPECIES 3 ENSGT00950000182849.B.c.a.b.b ENSGT00390000008063.k.a ENSGT01100000263497.E.a.a ENSGT00390000006806 ENSGT00390000008063.k.b ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156051.c.a ENSGT00940000162556.D.b.b ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT00390000013973.B.g.a ENSGT01030000234567.B.a.b.b ENSGT01030000234567.B.a.b.a.b.a ENSGT01030000237991 ENSGT00940000157598 ENSGT00940000157195.m ENSGT00730000111690.A.a.a ENSGT00730000111690.A.a.b ENSGT01030000235004 ENSGT00940000164904.b ENSGT00950000182895.b.b ENSGT00390000000204 ENSGT00940000157333.b ENSGT00390000014620 ENSGT00940000153432.A.a Eupecaria_A ANCESTRAL SPECIES 5 ENSGT00950000182849.B.c.a.b.b ENSGT00390000008063.k.a ENSGT01100000263497.E.a.a ENSGT00390000006806 ENSGT00390000008063.k.b ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156051.c.a ENSGT00940000162556.D.b.b ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT00390000013973.B.g.a ENSGT01030000234567.B.a.b.b ENSGT01030000234567.B.a.b.a.b.a ENSGT00940000157598 ENSGT00940000157195.m ENSGT00730000111690.A.a.a ENSGT00730000111690.A.a.b ENSGT01030000235004 ENSGT00940000164904.b ENSGT00950000182895.a.a.a.b ENSGT00390000000204 ENSGT00940000157333.b ENSGT00390000014620 ENSGT00940000153432.A.a ENSGT00550000074902 Eupecaria_B ANCESTRAL SPECIES ENSGT00950000182849.B.c.a.b.b ENSGT00390000008063.k.a ENSGT01100000263497.E.a.a ENSGT00390000006806 ENSGT00390000008063.k.b ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156051.c.a ENSGT00940000162556.D.b.b ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT00390000013973.B.g.a ENSGT01030000234567.B.a.b.b ENSGT01030000234567.B.a.b.a.b.a ENSGT00940000157598 ENSGT00940000157195.m ENSGT00730000111690.A.a.a ENSGT00730000111690.A.a.b ENSGT01030000235004 ENSGT00940000164904.b ENSGT00950000182895.a.a.a.b ENSGT00390000000204 ENSGT00940000157333.b ENSGT00390000014620 ENSGT00940000153432.A.a ENSGT00550000074902 Eupecaria_C ANCESTRAL SPECIES 17 ENSGT00950000182849.B.c.a.b.b ENSGT00390000008063.k.a ENSGT01100000263497.E.a.a ENSGT00390000006806 ENSGT00390000008063.k.b ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156051.c.a ENSGT00940000162556.D.b.b ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT00390000013973.B.g.a ENSGT01030000234567.B.a.b.b ENSGT01030000234567.B.a.b.a.b.a ENSGT00940000157598 ENSGT00940000157195.m ENSGT00730000111690.A.a.a ENSGT00940000164904.b ENSGT00950000182895.b.b ENSGT00390000000204 ENSGT00940000157333.b ENSGT00390000014620 ENSGT00940000153432.A.a ENSGT00550000074902 ENSGT00940000163128.a ENSGT00950000183127.c.b.d.a.a.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 29 ENSGT00940000165523.b ENSGT00950000182849.B.c.a.b.b ENSGT00390000008063.k.a ENSGT01100000263497.E.a.a ENSGT00390000006806 ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156051.c.a ENSGT00940000162556.D.b.b ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT00390000013973.B.g.a ENSGT01030000234567.B.a.b.b ENSGT01030000234567.B.a.b.a.b.a ENSGT00940000157195.m ENSGT00730000111690.A.a.a ENSGT00730000111690.A.a.b ENSGT00940000164904.b ENSGT00390000000204 ENSGT00940000157333.b ENSGT00390000014620 ENSGT00940000153432.A.a ENSGT00550000074902 ENSGT00940000160720.b.b ENSGT00390000007786.a.b ENSGT01050000244893.c.b.b.b Large yellow croaker MODERN SPECIES 483 ENSLCRG00005000591 ENSLCRG00005000593 ENSLCRG00005000599 ENSLCRG00005000604 ENSLCRG00005000612 ENSLCRG00005000683 rln3a (ENSLCRG00005000700) rfx1a (ENSLCRG00005000728) KHSRP (ENSLCRG00005001222) ENSLCRG00005001284 ENSLCRG00005001287 ENSLCRG00005001296 ENSLCRG00005002537 rhot1a (ENSLCRG00005002676) zgc:153240 (ENSLCRG00005006910) #21 znf207a (ENSLCRG00005006912) #22 ENSLCRG00005006919 ENSLCRG00005006922 septin9a (ENSLCRG00005007132) ENSLCRG00005007139 ENSLCRG00005007140 ENSLCRG00005007141 ENSLCRG00005007142 ENSLCRG00005007144 jpt1b (ENSLCRG00005007147) ENSLCRG00005007149 NUP85 (ENSLCRG00005007152) GGA3 (ENSLCRG00005007239) mrps7 (ENSLCRG00005007328) mif4gda (ENSLCRG00005007329) slc25a19 (ENSLCRG00005007330) European seabass MODERN SPECIES 21 ENSDLAG00005025835 ENSDLAG00005031880 ENSDLAG00005025854 ENSDLAG00005030145 ENSDLAG00005025869 ENSDLAG00005025885 ENSDLAG00005025893 ENSDLAG00005025902 rln3a (ENSDLAG00005031564) ENSDLAG00005025913 ENSDLAG00005025917 ENSDLAG00005028667 ENSDLAG00005025922 rhot1a (ENSDLAG00005025953) zgc:153240 (ENSDLAG00005029628) #21 ZNF207 (ENSDLAG00005026047) #22 ENSDLAG00005032055 ENSDLAG00005029701 ENSDLAG00005029032 ENSDLAG00005001422 ENSDLAG00005001559 ENSDLAG00005001685 ENSDLAG00005026473 ENSDLAG00005001690 jpt1b (ENSDLAG00005001697) ENSDLAG00005001705 NUP85 (ENSDLAG00005001778) GGA3 (ENSDLAG00005002055) MRPS7 (ENSDLAG00005005749) MIF4GD (ENSDLAG00005027611) ENSDLAG00005027825 Gilthead seabream MODERN SPECIES 15 NHERF2 (ENSSAUG00010017544) dhps (ENSSAUG00010017548) ENSSAUG00010017550 ENSSAUG00010017551 dhps (ENSSAUG00010017553) dhps (ENSSAUG00010017564) ENSSAUG00010017569 ENSSAUG00010017621 rln3a (ENSSAUG00010017622) rfx1a (ENSSAUG00010017627) KHSRP (ENSSAUG00010017646) ENSSAUG00010018672 ADAP2 (ENSSAUG00010018678) rhot1a (ENSSAUG00010018702) zgc:153240 (ENSSAUG00010018829) #21 znf207a (ENSSAUG00010018831) #22 ENSSAUG00010018839 ENSSAUG00010018841 ENSSAUG00010018843 TNRC6C (ENSSAUG00010018845) septin9a (ENSSAUG00010018913) ENSSAUG00010020131 ENSSAUG00010020132 ENSSAUG00010020134 ENSSAUG00010020135 ENSSAUG00010020136 jpt1b (ENSSAUG00010020138) ENSSAUG00010020139 NUP85 (ENSSAUG00010020146) GGA3 (ENSSAUG00010020588) mrps7 (ENSSAUG00010020601) Perciformes ANCESTRAL SPECIES 1 ENSGT00940000165523.b ENSGT00950000182849.B.c.a.b.b ENSGT00390000008063.k.a ENSGT01100000263497.E.a.a ENSGT00390000006806 ENSGT00390000008063.k.b ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156051.c.a ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT01030000234567.B.a.b.b ENSGT01030000234567.B.a.b.a.b.a ENSGT00940000157598 ENSGT00730000111690.A.a.a.e.b ENSGT00940000157195.m ENSGT00730000111690.A.a.a.f ENSGT01030000235004 ENSGT00940000164904.b ENSGT00950000182895.a.a.a.b ENSGT00390000000204 ENSGT00940000157333.b ENSGT00390000014620 ENSGT00940000153432.A.a ENSGT00550000074902 ENSGT00940000160720.b.b Perciformes_a ANCESTRAL SPECIES 1 ENSGT00940000165523.b ENSGT00950000182849.B.c.a.b.b ENSGT00390000008063.k.a ENSGT01100000263497.E.a.a ENSGT00390000006806 ENSGT00390000008063.k.b ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156051.c.a ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT01030000234567.B.a.b.b ENSGT01030000234567.B.a.b.a.b.a ENSGT00940000157598 ENSGT00730000111690.A.a.a.e.b ENSGT00940000157195.m ENSGT00730000111690.A.a.a.f ENSGT01030000235004 ENSGT00940000164904.b ENSGT00950000182895.a.a.a.b ENSGT00390000000204 ENSGT00940000157333.b ENSGT00390000014620 ENSGT00940000153432.A.a ENSGT00550000074902 ENSGT00940000160720.b.b Pike perch MODERN SPECIES 27 ENSSLUG00000010441 sstr5 (ENSSLUG00000010436) NHERF2 (ENSSLUG00000010426) dhps (ENSSLUG00000010396) ENSSLUG00000010381 ENSSLUG00000010378 ENSSLUG00000010351 ENSSLUG00000010342 RLN3 (ENSSLUG00000010337) rfx1a (ENSSLUG00000010141) KHSRP (ENSSLUG00000010074) ENSSLUG00000010040 ADAP2 (ENSSLUG00000010022) rhot1a (ENSSLUG00000005698) zgc:153240 (ENSSLUG00000005408) #21 znf207a (ENSSLUG00000005385) #22 ENSSLUG00000005365 ENSSLUG00000005350 ENSSLUG00000005341 TNRC6C (ENSSLUG00000005318) ENSSLUG00000005303 ENSSLUG00000005285 ENSSLUG00000021663 septin9a (ENSSLUG00000021543) ENSSLUG00000021532 jpt1b (ENSSLUG00000021529) ENSSLUG00000021525 NUP85 (ENSSLUG00000021441) GGA3 (ENSSLUG00000020005) mrps7 (ENSSLUG00000019931) mif4gda (ENSSLUG00000019930) Ballan wrasse MODERN SPECIES 741 ENSLBEG00000009219 rfx1a (ENSLBEG00000009191) ENSLBEG00000009124 ENSLBEG00000008946 rhot1a (ENSLBEG00000008846) zgc:153240 (ENSLBEG00000008779) #21 znf207a (ENSLBEG00000008702) #22 ENSLBEG00000008544 ENSLBEG00000008015 ENSLBEG00000007870 Ovalentaria ANCESTRAL SPECIES 1 ENSGT00390000008063.k.a ENSGT01100000263497.E.a.a ENSGT00390000006806 ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156051.c.a ENSGT00940000162556.E.b.a ENSGT00940000162556.E.a.n.a ENSGT00940000162556.D.b.b ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT00390000013973.B.g.a ENSGT01030000234567.B.a.b.b ENSGT01030000234567.B.a.b.a.b.a ENSGT01030000237991 ENSGT00940000157598 ENSGT00730000111690.A.a.a.a.b ENSGT00730000111690.A.a.b ENSGT00730000111690.A.a.a.a.a ENSGT00940000157195.m ENSGT00730000111690.A.a.a.b ENSGT01030000235004 ENSGT00940000164904.b ENSGT00950000182895.b.b ENSGT00390000000204 ENSGT00940000157333.b Atherinomorphae ANCESTRAL SPECIES 6 ENSGT00950000182849.B.c.a.b.b ENSGT00390000008063.k.a ENSGT01100000263497.E.a.a ENSGT00390000006806 ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000162556.E.b.a ENSGT00940000162556.E.a.n.a ENSGT00940000162556.D.b.b ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT00390000013973.B.g.a ENSGT01030000234567.B.a.b.b ENSGT01030000234567.B.a.b.a.b.a ENSGT01030000237991 ENSGT00940000157598 ENSGT00940000157195.m ENSGT00730000111690.A.a.b ENSGT00730000111690.A.a.a.a.a ENSGT00940000164904.b ENSGT00950000182895.b.b ENSGT00390000000204 ENSGT00940000157333.b ENSGT00390000014620 ENSGT00940000153432.A.a ENSGT00550000074902 Oryzias ANCESTRAL SPECIES ENSGT00940000165523.b ENSGT00950000182849.B.c.a.b.b ENSGT00390000008063.k.a ENSGT01100000263497.E.a.a ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e.p ENSGT00940000162556.E.b.a ENSGT00940000162556.E.a.n.a ENSGT00940000162556.D.b.b ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT00390000013973.B.g.a ENSGT01030000234567.B.a.b.b ENSGT01030000234567.B.a.b.a.b.a ENSGT00940000157598 ENSGT00940000157195.m ENSGT00730000111690.A.a.b ENSGT00730000111690.A.a.a.a.a ENSGT00940000164904.b ENSGT00950000182895.b.b ENSGT00390000000204 ENSGT00940000157333.b ENSGT00390000014620 ENSGT00940000153432.A.a ENSGT00550000074902 ENSGT00940000175870 Oryzias_b ANCESTRAL SPECIES 11 ENSGT00940000165523.b ENSGT00950000182849.B.c.a.b.b ENSGT00390000008063.k.a ENSGT01100000263497.E.a.a ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e.p ENSGT00940000162556.E.b.a ENSGT00940000162556.E.a.n.a ENSGT00940000162556.D.b.b ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT00390000013973.B.g.a ENSGT01030000234567.B.a.b.b ENSGT01030000234567.B.a.b.a.b.a ENSGT00940000157598 ENSGT00940000157195.m ENSGT00730000111690.A.a.b ENSGT00730000111690.A.a.a.a.a ENSGT00940000164904.b ENSGT00950000182895.b.b ENSGT00390000000204 ENSGT00940000157333.b ENSGT00390000014620 ENSGT00940000153432.A.a ENSGT00550000074902 ENSGT00940000163128.a Indian medaka MODERN SPECIES 9 ENSOMEG00000014971 ENSOMEG00000014953 sstr5 (ENSOMEG00000014936) NHERF2 (ENSOMEG00000014926) dhps (ENSOMEG00000014905) ENSOMEG00000014877 ENSOMEG00000014806 rln3a (ENSOMEG00000014778) rfx1a (ENSOMEG00000014767) ENSOMEG00000014738 ENSOMEG00000014731 ENSOMEG00000014687 ENSOMEG00000014605 rhot1a (ENSOMEG00000014577) zgc:153240 (ENSOMEG00000014513) #21 znf207a (ENSOMEG00000014474) #22 ENSOMEG00000014453 ENSOMEG00000014435 ENSOMEG00000014388 TNRC6C (ENSOMEG00000000357) septin9a (ENSOMEG00000014214) ENSOMEG00000014124 ENSOMEG00000014111 jpt1b (ENSOMEG00000014097) ENSOMEG00000014073 NUP85 (ENSOMEG00000014029) GGA3 (ENSOMEG00000013914) mrps7 (ENSOMEG00000013815) mif4gda (ENSOMEG00000013847) slc25a19 (ENSOMEG00000013800) ENSOMEG00000013761 Javanese ricefish MODERN SPECIES 22 ENSOJAG00000015167 ENSOJAG00000015673 rln3a (ENSOJAG00000015784) RFX1 (ENSOJAG00000015800) ENSOJAG00000015823 ENSOJAG00000015812 ENSOJAG00000015830 ADAP2 (ENSOJAG00000005700) rhot1a (ENSOJAG00000005748) ENSOJAG00000005832 rfx1a (ENSOJAG00000005927) ENSOJAG00000006040 ENSOJAG00000006101 ENSOJAG00000006141 zgc:153240 (ENSOJAG00000006947) #21 znf207a (ENSOJAG00000006969) #22 ENSOJAG00000007040 ENSOJAG00000007060 ENSOJAG00000007094 septin9a (ENSOJAG00000007237) ENSOJAG00000007399 ENSOJAG00000007404 ENSOJAG00000007423 jpt1b (ENSOJAG00000007432) ENSOJAG00000007439 NUP85 (ENSOJAG00000007498) GGA3 (ENSOJAG00000007669) mrps7 (ENSOJAG00000007739) mif4gda (ENSOJAG00000007748) slc25a19 (ENSOJAG00000007761) ENSOJAG00000007769 Oryzias_a ANCESTRAL SPECIES 10 ENSGT00950000182933.B.a.b.b.p ENSGT00950000182933.B.a.b.b.o ENSGT00950000182933.B.a.b.a ENSGT00940000165523.b ENSGT00950000182849.B.c.a.b.b ENSGT00390000008063.k.a ENSGT01100000263497.E.a.a ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e.p ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT00390000013973.B.g.a ENSGT01030000234567.B.a.b.b ENSGT01030000234567.B.a.b.a.b.a ENSGT00940000157598 ENSGT00940000157195.m ENSGT00730000111690.A.a.b ENSGT00730000111690.A.a.a.a.a ENSGT00940000164904.b ENSGT00950000182895.b.b ENSGT00390000000204 ENSGT00940000157333.b ENSGT00390000014620 ENSGT00940000153432.A.a ENSGT00550000074902 ENSGT00940000163128.a Japanese Medaka HdrR MODERN SPECIES 22 ENSORLG00000010458 ENSORLG00000029028 ENSORLG00000027535 sstr5 (ENSORLG00000010452) ENSORLG00000027854 dhps (ENSORLG00000010415) ENSORLG00000029272 ENSORLG00000010363 ENSORLG00000026757 rln3a (ENSORLG00000027728) rfx1a (ENSORLG00000010273) ENSORLG00000010214 ENSORLG00000010192 rhot1a (ENSORLG00000010097) zgc:153240 (ENSORLG00000025939) #21 znf207a (ENSORLG00000023077) #22 ENSORLG00000009880 ENSORLG00000009867 ENSORLG00000009853 TNRC6C (ENSORLG00000009837) ENSORLG00000021937 septin9a (ENSORLG00000009803) jpt1b (ENSORLG00000028408) sumo2b (ENSORLG00000009773) NUP85 (ENSORLG00000009756) GGA3 (ENSORLG00000009729) mrps7 (ENSORLG00000009696) mif4gda (ENSORLG00000009677) slc25a19 (ENSORLG00000009665) ENSORLG00000009646 ENSORLG00000009642 Chinese medaka MODERN SPECIES 686 ENSOSIG00000016499 ENSOSIG00000016498 ENSOSIG00000016494 sstr5 (ENSOSIG00000016493) NHERF2 (ENSOSIG00000016492) dhps (ENSOSIG00000016486) ENSOSIG00000016483 ENSOSIG00000016459 ENSOSIG00000016455 rln3a (ENSOSIG00000016452) rfx1a (ENSOSIG00000015827) ENSOSIG00000015806 ENSOSIG00000015803 rhot1a (ENSOSIG00000015339) zgc:153240 (ENSOSIG00000015330) #21 znf207a (ENSOSIG00000015327) #22 ENSOSIG00000015323 ENSOSIG00000015321 ENSOSIG00000015319 ENSOSIG00000015258 ENSOSIG00000015257 septin9a (ENSOSIG00000015233) jpt1b (ENSOSIG00000015226) ENSOSIG00000015208 NUP85 (ENSOSIG00000014825) GGA3 (ENSOSIG00000008159) mrps7 (ENSOSIG00000008115) mif4gda (ENSOSIG00000008113) slc25a19 (ENSOSIG00000008112) ENSOSIG00000008110 CACNG1 (ENSOSIG00000008109) Ovalentaria_B ANCESTRAL SPECIES ENSGT00940000165523.b ENSGT00950000182849.B.c.a.b.b ENSGT00390000008063.k.a ENSGT01100000263497.E.a.a ENSGT00390000006806 ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156051.c.a ENSGT00940000162556.D.b.b ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT00390000013973.B.g.a ENSGT01030000234567.B.a.b.b ENSGT01030000234567.B.a.b.a.b.a ENSGT00940000157598 ENSGT00730000111690.A.a.a.a.b ENSGT00730000111690.A.a.b ENSGT00940000157195.m ENSGT00730000111690.A.a.a.a.a ENSGT00730000111690.A.a.a.b ENSGT01030000235004 ENSGT00940000164904.b ENSGT00950000182895.a.a.a.b ENSGT00390000000204 ENSGT00940000157333.b ENSGT00390000014620 Cichlidae ANCESTRAL SPECIES 16 ENSGT00940000165523.b ENSGT00950000182849.B.c.a.b.b ENSGT00390000008063.k.a ENSGT01100000263497.E.a.a ENSGT00390000006806 ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156051.c.a ENSGT00940000162556.D.b.b ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT00390000013973.B.g.a ENSGT01030000234567.B.a.b.b ENSGT01030000234567.B.a.b.a.b.a ENSGT00940000157598 ENSGT00940000157195.m ENSGT00730000111690.A.a.a.a.a.b ENSGT00730000111690.A.a.a.a.b ENSGT00730000111690.A.a.b ENSGT01030000235004 ENSGT00940000164904.b ENSGT00950000182895.a.a.a.b ENSGT00390000000204 ENSGT00940000157333.b ENSGT00390000014620 ENSGT00940000153432.A.a Pseudocrenilabrinae ANCESTRAL SPECIES 1 ENSGT00940000165523.b ENSGT00950000182849.B.c.a.b.b ENSGT00390000008063.k.a ENSGT01100000263497.E.a.a ENSGT00390000006806 ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156051.c.a ENSGT00940000162556.D.b.b ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT00390000013973.B.g.a ENSGT00730000111690.A.a.a.a.b.a.a ENSGT00730000111690.A.a.a.a.b.b.b ENSGT01030000234567.B.a.b.a.b.a ENSGT00940000157598 ENSGT00940000157195.m ENSGT00730000111690.A.a.a.a.a.b ENSGT00730000111690.A.a.a.a.b.a.b ENSGT00730000111690.A.a.b ENSGT01030000235004 ENSGT00940000164904.b ENSGT00950000182895.a.a.a.b ENSGT00390000000204 ENSGT00940000157333.b ENSGT00390000014620 Pseudocrenilabrinae_A ANCESTRAL SPECIES 12 ENSGT00940000165523.b ENSGT00950000182849.B.c.a.b.b ENSGT00390000008063.k.a ENSGT01100000263497.E.a.a ENSGT00390000006806 ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156051.c.a ENSGT00940000162556.D.b.b ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT00390000013973.B.g.a ENSGT00730000111690.A.a.a.a.b.a.a ENSGT00730000111690.A.a.a.a.b.b.b ENSGT00730000111690.A.a.a.a.b.b.a.b.a ENSGT00730000111690.A.a.a.a.b.b.a.b.b.b ENSGT01030000234567.B.a.b.a.b.a ENSGT00940000157598 ENSGT00730000111690.A.a.a.a.b.a.b ENSGT00730000111690.A.a.b ENSGT00940000157195.m ENSGT00730000111690.A.a.a.a.a.b ENSGT00730000111690.A.a.a.a.a.a ENSGT01030000235004 ENSGT00940000164904.b ENSGT00950000182895.a.a.a.b Haplochromini ANCESTRAL SPECIES 12 ENSGT00950000182849.B.c.a.b.b ENSGT00390000008063.k.a.b ENSGT00390000008063.k.a.a.a ENSGT01100000263497.E.a.a ENSGT00390000006806 ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156051.c.a.a ENSGT00940000162556.D.b.b ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT00390000013973.B.g.a ENSGT00730000111690.A.a.a.a.b.b.a.a.a ENSGT00730000111690.A.a.a.a.b.a.a ENSGT00730000111690.A.a.a.a.b.b.b ENSGT00730000111690.A.a.a.a.b.b.a.b.a ENSGT00730000111690.A.a.a.a.b.b.a.b.b.b ENSGT01030000234567.B.a.b.a.b.a ENSGT00940000157598.k ENSGT00730000111690.A.a.a.a.b.a.b ENSGT00730000111690.A.a.b ENSGT00940000157195.m ENSGT00730000111690.A.a.a.a.a.b ENSGT00730000111690.A.a.a.a.a.a ENSGT01030000235004 ENSGT00940000164904.b Burton s mouthbrooder MODERN SPECIES 842 sstr5 (ENSHBUG00000015019) NHERF2 (ENSHBUG00000014977) dhps (ENSHBUG00000014931) ENSHBUG00000014871 ENSHBUG00000014860 ENSHBUG00000014849 ENSHBUG00000014786 rln3a (ENSHBUG00000000433) rfx1a (ENSHBUG00000014773) KHSRP (ENSHBUG00000014760) ENSHBUG00000014693 ENSHBUG00000014685 ADAP2 (ENSHBUG00000014673) rhot1a (ENSHBUG00000014661) zgc:153240 (ENSHBUG00000014547) #21 znf207a (ENSHBUG00000014526) #22 ENSHBUG00000014507 Haplochromini_A ANCESTRAL SPECIES 14 ENSGT00950000182849.B.c.a.b.b ENSGT00390000008063.k.a.b ENSGT01100000263497.E.a.a ENSGT00390000006806 ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156051.c.a.a ENSGT00940000162556.D.b.b ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT01050000245616 ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT00390000013973.B.g.a ENSGT00730000111690.A.a.a.a.b.b.a.a.a ENSGT00730000111690.A.a.a.a.b.a.a ENSGT00730000111690.A.a.a.a.b.b.b ENSGT00730000111690.A.a.a.a.b.b.a.b.a ENSGT00730000111690.A.a.a.a.b.b.a.b.b.b ENSGT01030000234567.B.a.b.a.b.a ENSGT00940000157598.k ENSGT00730000111690.A.a.a.a.b.a.b ENSGT00730000111690.A.a.b ENSGT00940000157195.m ENSGT00730000111690.A.a.a.a.a.b ENSGT00730000111690.A.a.a.a.a.a ENSGT01030000235004 ENSGT00940000164904.b Haplochromini_B ANCESTRAL SPECIES 33 ENSGT00390000008063.k.a.b ENSGT01100000263497.E.a.a ENSGT00390000006806 ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156051.c.a.a ENSGT00940000162556.D.b.b ENSGT01040000241353 ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT01050000245616 ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT00390000013973.B.g.a ENSGT00730000111690.A.a.a.a.b.b.a.a.a ENSGT00730000111690.A.a.a.a.b.a.a ENSGT00730000111690.A.a.a.a.b.b.b ENSGT00730000111690.A.a.a.a.b.b.a.b.a ENSGT00730000111690.A.a.a.a.b.b.a.b.b.b ENSGT01030000234567.B.a.b.a.b.a ENSGT00940000157598.k ENSGT00730000111690.A.a.a.a.b.a.b ENSGT00730000111690.A.a.b ENSGT00940000157195.m ENSGT00730000111690.A.a.a.a.a.b ENSGT00730000111690.A.a.a.a.a.a ENSGT01030000235004 ENSGT00940000164904.b Zebra mbuna MODERN SPECIES 1107 NHERF2 (ENSMZEG00005011395) dhps (ENSMZEG00005011357) ENSMZEG00005011350 ENSMZEG00005011335 ENSMZEG00005011298 ENSMZEG00005011280 ENSMZEG00005011272 rfx1a (ENSMZEG00005011253) KHSRP (ENSMZEG00005011227) ENSMZEG00005011218 ENSMZEG00005011213 ENSMZEG00005011189 ENSMZEG00005011167 rhot1a (ENSMZEG00005011127) zgc:153240 (ENSMZEG00005011093) #21 znf207a (ENSMZEG00005011055) #22 ENSMZEG00005011045 ENSMZEG00005011037 ENSMZEG00005011025 ENSMZEG00005011016 ENSMZEG00005011011 ENSMZEG00005011000 TNRC6C (ENSMZEG00005010920) tmem11 (ENSMZEG00005010875) natd1 (ENSMZEG00005010868) KCNJ18 (ENSMZEG00005010861) tufm (ENSMZEG00005010857) hspbp1 (ENSMZEG00005010848) tmem86b (ENSMZEG00005010853) aspdh (ENSMZEG00005010838) gys1 (ENSMZEG00005010817) Eastern happy MODERN SPECIES 16 NHERF2 (ENSACLG00000001982) dhps (ENSACLG00000001931) ENSACLG00000001925 ENSACLG00000001908 ENSACLG00000001853 rln3a (ENSACLG00000001794) rfx1a (ENSACLG00000001622) KHSRP (ENSACLG00000001424) ENSACLG00000001409 ENSACLG00000001396 ENSACLG00000001283 ENSACLG00000001246 rhot1a (ENSACLG00000001110) ENSACLG00000001088 zgc:153240 (ENSACLG00000000977) #21 znf207a (ENSACLG00000000961) #22 ENSACLG00000000957 ENSACLG00000000949 ENSACLG00000000929 ENSACLG00000000921 ENSACLG00000000899 ENSACLG00000000648 ENSACLG00000000622 ENSACLG00000000615 ENSACLG00000000606 ENSACLG00000000594 ENSACLG00000000584 ENSACLG00000000570 ENSACLG00000000557 ENSACLG00000000474 TNRC6C (ENSACLG00000000424) P. nyererei MODERN SPECIES 354 ENSPNYG00000013729 ENSPNYG00000013748 ENSPNYG00000013833 ENSPNYG00000013860 rfx1a (ENSPNYG00000013918) KHSRP (ENSPNYG00000014008) ENSPNYG00000014036 ENSPNYG00000014046 ENSPNYG00000014049 ENSPNYG00000014058 ENSPNYG00000014069 ADAP2 (ENSPNYG00000014086) rhot1a (ENSPNYG00000014164) ENSPNYG00000014263 zgc:153240 (ENSPNYG00000014279) #21 znf207a (ENSPNYG00000014312) #22 ENSPNYG00000014346 ENSPNYG00000014369 ENSPNYG00000014385 ENSPNYG00000014403 ENSPNYG00000014414 TNRC6C (ENSPNYG00000014477) septin9a (ENSPNYG00000014571) ENSPNYG00000014599 ENSPNYG00000014614 ENSPNYG00000014621 ENSPNYG00000014632 jpt1b (ENSPNYG00000014647) ENSPNYG00000014660 NUP85 (ENSPNYG00000014689) ENSPNYG00000014743 Lyretail cichlid MODERN SPECIES 310 sstr5 (ENSNBRG00000006418) NHERF2 (ENSNBRG00000006388) dhps (ENSNBRG00000006341) ENSNBRG00000006314 ENSNBRG00000006242 ENSNBRG00000006205 ENSNBRG00000006159 rfx1a (ENSNBRG00000006011) KHSRP (ENSNBRG00000005876) ENSNBRG00000005851 ENSNBRG00000005818 ENSNBRG00000005804 ENSNBRG00000005785 rhot1a (ENSNBRG00000005687) zgc:153240 (ENSNBRG00000005635) #21 znf207a (ENSNBRG00000005625) #22 ENSNBRG00000005602 ENSNBRG00000005584 ENSNBRG00000005568 ENSNBRG00000005552 ENSNBRG00000005534 ENSNBRG00000005420 TNRC6C (ENSNBRG00000005344) septin9a (ENSNBRG00000005310) ENSNBRG00000005288 ENSNBRG00000005280 ENSNBRG00000005266 ENSNBRG00000005262 jpt1b (ENSNBRG00000005252) ENSNBRG00000005234 NUP85 (ENSNBRG00000005206) Nile tilapia MODERN SPECIES 16 NHERF2 (ENSONIG00000029228) dhps (ENSONIG00000002141) ENSONIG00000002145 ENSONIG00000002146 ENSONIG00000002147 ENSONIG00000002150 rln3a (ENSONIG00000002154) rfx1a (ENSONIG00000002158) KHSRP (ENSONIG00000002163) ENSONIG00000002176 ENSONIG00000039820 ENSONIG00000002178 ENSONIG00000002183 rhot1a (ENSONIG00000002188) zgc:153240 (ENSONIG00000002199) #21 znf207a (ENSONIG00000002200) #22 ENSONIG00000002203 ENSONIG00000041549 ENSONIG00000002204 ENSONIG00000038827 ENSONIG00000042637 ENSONIG00000002205 TNRC6C (ENSONIG00000002210) septin9a (ENSONIG00000002224) ENSONIG00000033783 ENSONIG00000033860 jpt1b (ENSONIG00000029996) ENSONIG00000002235 NUP85 (ENSONIG00000002239) GGA3 (ENSONIG00000002247) mrps7 (ENSONIG00000002249) Midas cichlid MODERN SPECIES 859 dhps (ENSACIG00000007456) ENSACIG00000007476 ENSACIG00000007487 ENSACIG00000007497 ENSACIG00000007518 ENSACIG00000007560 RLN3 (ENSACIG00000007584) rfx1a (ENSACIG00000007590) ENSACIG00000007641 ENSACIG00000007647 ENSACIG00000007671 ADAP2 (ENSACIG00000007785) rhot1a (ENSACIG00000007890) zgc:153240 (ENSACIG00000007929) #21 ENSACIG00000007952 znf207a (ENSACIG00000007962) #22 ENSACIG00000007980 ENSACIG00000008003 ENSACIG00000008053 TNRC6C (ENSACIG00000008075) septin9a (ENSACIG00000008111) Pomacentridae ANCESTRAL SPECIES 8 ENSGT00950000182933.B.a.b.a ENSGT00940000165523.b ENSGT00950000182849.B.c.a.b.b ENSGT00390000008063.k.a ENSGT01100000263497.E.a.a ENSGT00390000006806 ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156051.c.a ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT00390000013973.B.g.a ENSGT01030000234567.B.a.b.b ENSGT01030000234567.B.a.b.a.b.a ENSGT00940000157598 ENSGT00940000157195.m ENSGT00730000111690.A.a.a.b ENSGT01030000235004 ENSGT00940000164904.b ENSGT00390000000204 ENSGT00940000157333.b ENSGT00390000014620 ENSGT00940000153432.A.a ENSGT00550000074902 ENSGT00940000160720.b.b ENSGT00940000175870 Pomacentridae_A ANCESTRAL SPECIES 40 ENSGT00950000182933.B.a.b.a ENSGT00940000165523.b ENSGT00950000182849.B.c.a.b.b ENSGT00390000008063.k.a ENSGT01100000263497.E.a.a ENSGT00390000006806 ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156051.c.a ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT00390000013973.B.g.a ENSGT01030000234567.B.a.b.b ENSGT01030000234567.B.a.b.a.b.a ENSGT00940000157598 ENSGT00940000157195.m ENSGT00730000111690.A.a.a.b.a ENSGT01030000235004 ENSGT00940000164904.b ENSGT00390000000204 ENSGT00940000157333.b ENSGT00390000014620 ENSGT00940000153432.A.a ENSGT00550000074902 ENSGT00940000160720.b.b ENSGT00950000183127.c.b.d.a.a.b.d Amphiprion ANCESTRAL SPECIES 31 ENSGT00950000182933.B.a.b.a ENSGT00940000165523.b ENSGT00950000182849.B.c.a.b.b ENSGT00390000008063.k.a ENSGT01100000263497.E.a.a ENSGT00390000006806 ENSGT00940000156708.a.b ENSGT00940000155603.B ENSGT00940000154396.b.a.a.a ENSGT01050000244879.a.b.e ENSGT00940000156051.c.a ENSGT00940000153469.a.a.k ENSGT00940000156498.g.a ENSGT00940000155641.g.a ENSGT00390000005481 #21 ENSGT00730000111057.c #22 ENSGT00390000013973.B.g.a ENSGT01030000234567.B.a.b.b ENSGT01030000234567.B.a.b.a.b.a ENSGT00940000157598 ENSGT00940000157195.m ENSGT00940000164904.b ENSGT00390000000204 ENSGT00940000157333.b ENSGT00390000014620 ENSGT00940000153432.A.a ENSGT00550000074902 ENSGT00940000160720.b.b ENSGT00950000183127.c.b.d.a.a.b.d ENSGT00940000161847.b.a.e.a.b.d ENSGT00390000007786.a.b Orange clownfish MODERN SPECIES 5 ENSAPEG00000008296 sstr5 (ENSAPEG00000008314) NHERF2 (ENSAPEG00000008333) dhps (ENSAPEG00000008349) ENSAPEG00000008389 ENSAPEG00000008404 ENSAPEG00000008429 ENSAPEG00000008511 rln3a (ENSAPEG00000008528) rfx1a (ENSAPEG00000008546) KHSRP (ENSAPEG00000008575) ENSAPEG00000008653 ENSAPEG00000008673 rhot1a (ENSAPEG00000008727) zgc:153240 (ENSAPEG00000008841) #21 znf207a (ENSAPEG00000008888) #22 ENSAPEG00000008911 ENSAPEG00000008925 ENSAPEG00000008962 ENSAPEG00000009002 TNRC6C (ENSAPEG00000009020) septin9a (ENSAPEG00000009133) ENSAPEG00000009202 ENSAPEG00000009224 ENSAPEG00000009244 jpt1b (ENSAPEG00000009261) ENSAPEG00000009292 NUP85 (ENSAPEG00000009318) GGA3 (ENSAPEG00000009405) mrps7 (ENSAPEG00000009421) mif4gda (ENSAPEG00000009426) Clown anemonefish MODERN SPECIES 913 dhps (ENSAOCG00000010437) ENSAOCG00000010406 ENSAOCG00000010396 ENSAOCG00000010374 ENSAOCG00000010268 RLN3 (ENSAOCG00000010249) rfx1a (ENSAOCG00000010235) KHSRP (ENSAOCG00000010189) ENSAOCG00000010142 ENSAOCG00000001836 rhot1a (ENSAOCG00000002190) zgc:153240 (ENSAOCG00000009929) #21 znf207a (ENSAOCG00000009894) #22 ENSAOCG00000009824 ENSAOCG00000009814 Spiny chromis MODERN SPECIES 2648 zgc:153240 (ENSAPOG00000023715) #21 znf207a (ENSAPOG00000023653) #22 ENSAPOG00000023626 Bicolor damselfish MODERN SPECIES 695 SDR42E2 (ENSSPAG00000008789) MOSMO (ENSSPAG00000008779) ENSSPAG00000008753 ENSSPAG00000008690 rgs9a (ENSSPAG00000008623) GNA13 (ENSSPAG00000008595) ENSSPAG00000008512 ENSSPAG00000008464 RLN3 (ENSSPAG00000008460) rfx1a (ENSSPAG00000008305) KHSRP (ENSSPAG00000008244) ENSSPAG00000008156 ADAP2 (ENSSPAG00000008125) rhot1a (ENSSPAG00000008078) zgc:153240 (ENSSPAG00000008052) #21 znf207a (ENSSPAG00000007908) #22 ENSSPAG00000007897 ENSSPAG00000007696 Pinecone sodierfish MODERN SPECIES 22 dhps (ENSMMDG00005016126) ENSMMDG00005016134 ENSMMDG00005016138 dhps (ENSMMDG00005016149) dhps (ENSMMDG00005016323) ENSMMDG00005016338 ENSMMDG00005016348 ENSMMDG00005016355 rfx1a (ENSMMDG00005000302) KHSRP (ENSMMDG00005000383) ENSMMDG00005000626 ENSMMDG00005000632 ENSMMDG00005000644 rhot1a (ENSMMDG00005000761) zgc:153240 (ENSMMDG00005005682) #21 znf207a (ENSMMDG00005005689) #22 ENSMMDG00005005744 ENSMMDG00005005755 TNRC6C (ENSMMDG00005005790) septin9a (ENSMMDG00005006031) ENSMMDG00005006996 ENSMMDG00005006999 jpt1b (ENSMMDG00005007001) ENSMMDG00005007004 NUP85 (ENSMMDG00005007021) GGA3 (ENSMMDG00005007472) mrps7 (ENSMMDG00005010262) mif4gda (ENSMMDG00005010263) slc25a19 (ENSMMDG00005010265) PITPNC1 (ENSMMDG00005010266) CACNG1 (ENSMMDG00005010271) Clupeocephala ANCESTRAL SPECIES 96 ENSGT00940000160081.c.a ENSGT00940000158476.a ENSGT00390000006555 ENSGT00940000158604 ENSGT00940000164979 ENSGT00440000033742.a.b.c ENSGT00980000203447 ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000164538 ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073890 ENSGT00940000164904.a ENSGT00950000182895.b.b ENSGT00940000157333.a ENSGT00940000153578.A.e ENSGT00940000154705.A.a ENSGT00940000155563.k.a ENSGT01050000244891.E.a.b ENSGT00940000154830.c ENSGT00940000155738 ENSGT00940000154272.B.a ENSGT00940000158772.a Otomorpha ANCESTRAL SPECIES 4 ENSGT00940000154272.B.b ENSGT00390000007779 ENSGT00410000025739.c.b ENSGT00940000157016 ENSGT00940000158772.a ENSGT00940000154272.B.a ENSGT00940000155738 ENSGT00940000153432.A.a.j ENSGT00940000157333.a ENSGT00950000182895.b.b ENSGT00940000164904.a ENSGT00540000073890 ENSGT00940000157195.n ENSGT00940000167317 ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000155641.g.b ENSGT00940000156498.g.b ENSGT00390000010581 ENSGT00940000153469.a.a.l ENSGT00390000012364.b ENSGT00390000016493 ENSGT00980000203447 ENSGT00440000033742.a.b.c ENSGT00940000164979 ENSGT00940000158604 ENSGT00390000006555 ENSGT00940000158476.a ENSGT00940000160081.c.a ENSGT00940000160777 Otophysi ANCESTRAL SPECIES 8 ENSGT00940000158772.a ENSGT00940000154272.B.a ENSGT00940000155738 ENSGT00940000154830.c ENSGT01050000244891.E.a.b ENSGT00940000155563.k.a.a ENSGT00940000154705.A.a ENSGT00940000153432.A.a.j ENSGT00940000157333.a ENSGT00950000182895.b.b ENSGT00940000164904.a ENSGT00540000073890 ENSGT00940000157195.n ENSGT00940000167317 ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT01030000235061 ENSGT00940000155641.g.b ENSGT01030000234583.a.b.b.f ENSGT00390000010581 ENSGT00940000153469.a.a.l ENSGT00390000012364.b ENSGT00390000016493 ENSGT00980000203447 ENSGT00940000180162 ENSGT00440000033742.a.b.c ENSGT00940000164979 ENSGT00940000158604 ENSGT00390000006555 ENSGT00940000158476.a ENSGT00940000160081.c.a Characiphysae ANCESTRAL SPECIES 18 ENSGT00530000063753.A.a ENSGT00530000063753.B.c ENSGT00940000153882.a.a ENSGT00390000007779 ENSGT00410000025739.c.b ENSGT00940000157016 ENSGT00940000158772.a ENSGT00940000154272.B.a ENSGT00940000153432.A.a.j ENSGT00940000157333.a ENSGT00940000164904.a ENSGT00540000073890 ENSGT00940000157195.n ENSGT00940000167317 ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT01030000235061.c ENSGT00940000155641.g.b ENSGT00940000164538 ENSGT00390000010581 ENSGT00940000153469.a.a.l ENSGT00390000012364.b ENSGT00390000016493 ENSGT00980000203447 ENSGT00940000180162 ENSGT00440000033742.a.b.c ENSGT00940000164979 ENSGT00940000158604 ENSGT00390000006555 ENSGT00940000158476.a ENSGT00940000160081.c.a Characiphysae_b ANCESTRAL SPECIES 93 ENSGT00530000063753.B.c ENSGT00940000153882.a.a ENSGT00390000007779 ENSGT00410000025739.c.b ENSGT00940000157016 ENSGT00940000158772.a ENSGT00940000154272.B.a ENSGT00940000153432.A.a.j ENSGT00940000157333.a ENSGT00950000182895.b.b ENSGT00940000164904.a ENSGT00540000073890 ENSGT00940000157195.n ENSGT00940000167317 ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT01030000235061.c.a ENSGT00940000155641.g.b ENSGT00940000164538 ENSGT00390000010581 ENSGT00940000153469.a.a.l ENSGT00390000012364.b ENSGT00390000016493 ENSGT00980000203447 ENSGT00940000180162 ENSGT00440000033742.a.b.c ENSGT00940000164979 ENSGT00940000158604 ENSGT00390000006555 ENSGT00940000158476.a ENSGT00940000160081.c.a Characoidei ANCESTRAL SPECIES 23 ENSGT00940000167317 ENSGT00390000009571.a.a.e.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT01030000235061.c.a ENSGT00940000155641.g.b ENSGT01030000234583.a.b.b.f ENSGT00390000010581 ENSGT00940000153469.a.a.l ENSGT00390000012364.b ENSGT00390000016493 ENSGT00980000203447 ENSGT00940000180162 ENSGT00440000033742.a.b.c ENSGT00940000164979 ENSGT00940000158604 ENSGT00390000006555 ENSGT00940000158476.a ENSGT00940000160081.c.a.a Red-bellied piranha MODERN SPECIES 25 ENSPNAG00000026838 ENSPNAG00000026873 ENSPNAG00000026894 ENSPNAG00000026913 rhbdl3 (ENSPNAG00000026978) #20 znf207b (ENSPNAG00000026995) #22 cd7al (ENSPNAG00000006147) rhot1b (ENSPNAG00000027148) ENSPNAG00000027161 tefm (ENSPNAG00000005215) atad5b (ENSPNAG00000027211) suz12b (ENSPNAG00000027350) utp6 (ENSPNAG00000027370) ENSPNAG00000027381 ENSPNAG00000004225 rab11fip4b (ENSPNAG00000027425) trim25 (ENSPNAG00000027470) dgke (ENSPNAG00000027570) si:dkey-31g6.6 (ENSPNAG00000005818) cbx8b (ENSPNAG00000027605) CBX4 (ENSPNAG00000027611) Mexicana tetra MODERN SPECIES 4 myh9a (ENSAMXG00000010006) slc25a38b (ENSAMXG00000043532) rpsa (ENSAMXG00000033451) ttc26 (ENSAMXG00000009984) ubn2a (ENSAMXG00000009974) MYH10 (ENSAMXG00000009783) PIK3R6 (ENSAMXG00000009718) PIK3R5 (ENSAMXG00000009714) ENSAMXG00000037616 ENSAMXG00000009579 ENSAMXG00000030701 ENSAMXG00000009567 ENSAMXG00000031052 ENSAMXG00000044080 rhbdl3 (ENSAMXG00000034723) #20 znf207b (ENSAMXG00000029197) #22 cd7al (ENSAMXG00000034624) rhot1b (ENSAMXG00000009533) ENSAMXG00000030057 tefm (ENSAMXG00000040252) atad5b (ENSAMXG00000033736) suz12b (ENSAMXG00000009503) utp6 (ENSAMXG00000009478) ENSAMXG00000030367 rab11fip4b (ENSAMXG00000006062) ENSAMXG00000037334 trim25 (ENSAMXG00000006132) dgke (ENSAMXG00000006155) si:dkey-31g6.6 (ENSAMXG00000006157) cbx8b (ENSAMXG00000031454) CBX4 (ENSAMXG00000041860) Electric eel MODERN SPECIES 183 septin9b (ENSEEEG00000006531) ENSEEEG00000006505 rhbdl3 (ENSEEEG00000006504) #20 znf207b (ENSEEEG00000006503) #22 cd7al (ENSEEEG00000006502) rhot1b (ENSEEEG00000006240) ENSEEEG00000006232 tefm (ENSEEEG00000006230) suz12b (ENSEEEG00000006161) utp6 (ENSEEEG00000006094) rab11fip4b (ENSEEEG00000006092) trim25 (ENSEEEG00000006091) dgke (ENSEEEG00000006085) ENSEEEG00000006076 cbx8b (ENSEEEG00000006072) CBX4 (ENSEEEG00000006068) ENSEEEG00000006065 ccdc40 (ENSEEEG00000006062) anapc11 (ENSEEEG00000006061) Channel catfish MODERN SPECIES 3 ENSIPUG00000022875 cfap52 (ENSIPUG00000022861) grb2a (ENSIPUG00000022848) mif4gda (ENSIPUG00000022839) sumo2a (ENSIPUG00000022827) jpt1a (ENSIPUG00000022822) ENSIPUG00000022814 ENSIPUG00000022807 ENSIPUG00000022804 ENSIPUG00000022799 ENSIPUG00000022792 Sept9 (ENSIPUG00000022775) ENSIPUG00000022767 ENSIPUG00000022765 rhbdl3 (ENSIPUG00000022739) #20 znf207 (ENSIPUG00000022728) #22 cd7al (ENSIPUG00000022727) rhot1 (ENSIPUG00000022698) ENSIPUG00000022693 tefm (ENSIPUG00000022689) atad5b (ENSIPUG00000022687) suz12b (ENSIPUG00000022667) Utp6 (ENSIPUG00000022587) rab11fip4b (ENSIPUG00000022570) ENSIPUG00000022562 Cbx8 (ENSIPUG00000022555) c12h17orf67 (ENSIPUG00000022553) DGKE (ENSIPUG00000022532) trim25 (ENSIPUG00000022469) ENSIPUG00000022459 ENSIPUG00000022456 Cyprinoidei ANCESTRAL SPECIES 117 ENSGT00940000154272.B.a ENSGT00940000153432.A.a.j ENSGT00940000157333.a ENSGT00950000182895.a.a.a.b ENSGT00940000164904.b ENSGT01030000234583.a.a.c.b.a.a.a.b.b.a.a.a.a.a.a.a.a.b.a.a.a.b.a.a ENSGT00390000013965.b.b ENSGT00940000157333.b ENSGT00390000000204.l ENSGT00950000182895.b.b ENSGT00940000164904.a ENSGT00540000073890 ENSGT00940000157195.n ENSGT00940000167317 ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT01030000235061 ENSGT00940000155641.g.b ENSGT00390000010581 ENSGT00940000153469.a.a.l ENSGT00390000012364.b ENSGT00390000016493 ENSGT00980000203447 ENSGT00940000180162 ENSGT00440000033742.a.b.c ENSGT00940000164979 ENSGT00940000158604 ENSGT00390000006555 ENSGT00940000158476.a ENSGT00940000160081.c.a ENSGT00940000160777 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 41 ENSGT00530000063753.B.c.b ENSGT00940000153882.a.b.a.i.a ENSGT00390000007779.i ENSGT00410000025739.c.b.l ENSGT00940000157016.h ENSGT00940000158772.a.c ENSGT00940000154272.B.a.d ENSGT00940000155738.ab.b.a ENSGT00940000153432.A.a.j.a ENSGT00940000157333.a.b ENSGT00940000164904.a.b ENSGT00540000073890.i ENSGT00940000157195.n.a ENSGT00940000167317.e ENSGT00940000158838.h #20 ENSGT00730000111057.d.a #22 ENSGT01030000235061.a ENSGT01030000234583.a.b.b.f ENSGT00390000010581.c ENSGT00390000012364.b.e ENSGT00390000016493.p ENSGT00440000033742.a.b.c.d ENSGT00940000164979.c ENSGT00940000158604.b ENSGT00940000158476.a.e ENSGT00940000160081.c.a.c ENSGT00940000160777.i.a ENSGT00440000035688.g ENSGT00550000075186 ENSGT00940000161850.r.a.b ENSGT00940000159603.b.b Cyprininae_a ANCESTRAL SPECIES 10 ENSGT00530000063753.B.c.b ENSGT00940000153882.a.b.a.i.a ENSGT00390000007779.i ENSGT00410000025739.c.b.l ENSGT00940000157016.h ENSGT00940000158772.a.c ENSGT00940000154272.B.a.d ENSGT00940000155738.ab.b.a ENSGT00940000153432.A.a.j.a ENSGT00940000157333.a.b ENSGT00940000164904.a.b ENSGT00540000073890.i ENSGT00940000157195.n.a ENSGT00940000167317.e ENSGT00940000158838.h #20 ENSGT00730000111057.d.a #22 ENSGT01030000235061.a ENSGT00940000155641.g.b.b ENSGT01030000234583.a.b.b.f ENSGT00390000010581.c ENSGT00390000012364.b.e ENSGT00390000016493.p ENSGT00440000033742.a.b.c.d ENSGT00940000164979.c ENSGT00940000158604.b ENSGT00940000158476.a.e ENSGT00940000160081.c.a.c ENSGT00940000160777.i.a ENSGT00940000160777.i.b ENSGT00440000035688.g ENSGT00550000075186 Golden-line barbel MODERN SPECIES 147 ENSSGRG00000039144 rhbdl3 (ENSSGRG00000039145) #20 znf207b (ENSSGRG00000039147) #22 cd7al (ENSSGRG00000039280) rhot1b (ENSSGRG00000039281) ENSSGRG00000039283 tefm (ENSSGRG00000039284) suz12b (ENSSGRG00000039287) utp6 (ENSSGRG00000039520) rab11fip4b (ENSSGRG00000040408) trim25 (ENSSGRG00000040410) dgke (ENSSGRG00000040474) si:dkey-31g6.6 (ENSSGRG00000040659) cbx8b (ENSSGRG00000040660) CBX4 (ENSSGRG00000040661) ccdc40 (ENSSGRG00000040663) anapc11 (ENSSGRG00000040664) MCRIP1 (ENSSGRG00000040665) Common carp reference MODERN SPECIES 16 ntn1a (ENSCCRG00000075245) stx8 (ENSCCRG00000000405) ENSCCRG00000003958 ENSCCRG00000082892 usp43a (ENSCCRG00000059302) ENSCCRG00000058904 grb2a (ENSCCRG00000048224) mif4gda (ENSCCRG00000072454) gga3a (ENSCCRG00000062193) ENSCCRG00000061860 jpt1a (ENSCCRG00000044205) septin9b (ENSCCRG00000013302) ENSCCRG00000065785 ENSCCRG00000058311 rhbdl3 (ENSCCRG00000022531) #20 znf207b (ENSCCRG00000064644) #22 cd7al (ENSCCRG00000022504) ENSCCRG00000033440 tefm (ENSCCRG00000022802) suz12b (ENSCCRG00000033541) utp6 (ENSCCRG00000035885) rab11fip4b (ENSCCRG00000048102) trim25 (ENSCCRG00000057465) dgke (ENSCCRG00000051094) cbx8b (ENSCCRG00000005443) ENSCCRG00000005429 ENSCCRG00000062214 ENSCCRG00000064791 ENSCCRG00000081885 ccdc40 (ENSCCRG00000057991) anapc11 (ENSCCRG00000005895) Cyprininae ANCESTRAL SPECIES 12 ENSGT00390000007779.j ENSGT00410000025739.c.b.k ENSGT00940000157016.g ENSGT00940000158772.a.d ENSGT00940000154272.B.a.c ENSGT00940000155738.ab.b.b ENSGT00940000153432.A.a.j.b ENSGT00940000157333.a.a ENSGT00950000182895.b.b ENSGT00940000164904.a.a ENSGT00540000073890.j ENSGT00390000013965.b.b ENSGT00940000157195.n.b ENSGT00940000167317.f ENSGT00940000158838.g #20 ENSGT00730000111057.d.b #22 ENSGT01030000235061.b ENSGT00940000155641.g.b ENSGT00390000010581.d ENSGT00940000153469.a.a.l ENSGT00390000012364.b.f ENSGT00390000016493.o ENSGT00440000033742.a.b.c.c ENSGT00940000164979.d ENSGT00940000158604.a ENSGT00390000006555 ENSGT00940000158476.a.f ENSGT00940000160081.c.a.d ENSGT00940000160777.j ENSGT00940000161850.r.a.a ENSGT00940000159603.b.a Cyprininae_a ANCESTRAL SPECIES 23 ENSGT00940000153882.a.b.a.i.b ENSGT00390000007779.j ENSGT00410000025739.c.b.k ENSGT00940000157016.g ENSGT00940000154272.B.a.c ENSGT00940000155738.ab.b.b ENSGT00940000153432.A.a.j.b ENSGT00940000157333.a.a ENSGT00950000182895.b.b ENSGT00940000164904.a.a ENSGT00540000073890.j ENSGT00390000013965.b.b ENSGT00940000157195.n.b ENSGT00940000167317.f ENSGT00940000158838.g #20 ENSGT00730000111057.d.b #22 ENSGT01030000235061.b ENSGT00940000155641.g.b.a ENSGT00390000010581.d ENSGT00940000153469.a.a.l ENSGT00390000012364.b.f ENSGT00390000016493.o ENSGT00440000033742.a.b.c.c ENSGT00940000164979.d ENSGT00940000158604.a ENSGT00390000006555 ENSGT00940000158476.a.f ENSGT00940000160081.c.a.d ENSGT00940000160777.j ENSGT00940000161850.r.a.a ENSGT00940000159603.b.a Common carp reference MODERN SPECIES 10 stx8 (ENSCCRG00000060142) ENSCCRG00000000387 cfap52 (ENSCCRG00000014221) ENSCCRG00000031121 grb2a (ENSCCRG00000076119) mif4gda (ENSCCRG00000069673) ENSCCRG00000015088 gga3a (ENSCCRG00000015157) ENSCCRG00000044215 jpt1a (ENSCCRG00000082227) ENSCCRG00000069341 ENSCCRG00000060661 septin9b (ENSCCRG00000044759) ENSCCRG00000063208 rhbdl3 (ENSCCRG00000031119) #20 znf207b (ENSCCRG00000022495) #22 cd7al (ENSCCRG00000057203) rhot1b (ENSCCRG00000022542) tefm (ENSCCRG00000056201) atad5b (ENSCCRG00000022806) suz12b (ENSCCRG00000022847) utp6 (ENSCCRG00000023341) rab11fip4b (ENSCCRG00000068128) trim25 (ENSCCRG00000025552) dgke (ENSCCRG00000075162) si:dkey-31g6.6 (ENSCCRG00000025646) cbx8b (ENSCCRG00000077533) ENSCCRG00000025674 ENSCCRG00000001241 ccdc40 (ENSCCRG00000001244) MCRIP1 (ENSCCRG00000081833) Golden-line barbel MODERN SPECIES 468 rhbdl3 (ENSSGRG00000016623) #20 znf207b (ENSSGRG00000016624) #22 cd7al (ENSSGRG00000016631) rhot1b (ENSSGRG00000016638) tefm (ENSSGRG00000017386) suz12b (ENSSGRG00000017399) utp6 (ENSSGRG00000017754) rab11fip4b (ENSSGRG00000017761) trim25 (ENSSGRG00000017803) dgke (ENSSGRG00000017892) si:dkey-31g6.6 (ENSSGRG00000018027) cbx8b (ENSSGRG00000018028) CBX4 (ENSSGRG00000018029) ENSSGRG00000018030 ENSSGRG00000018031 anapc11 (ENSSGRG00000018033) MCRIP1 (ENSSGRG00000018034) Goldfish MODERN SPECIES 46 ENSCARG00000006638 cfap52 (ENSCARG00000006652) usp43a (ENSCARG00000006762) MCHR1 (ENSCARG00000006772) grb2a (ENSCARG00000006778) mif4gda (ENSCARG00000000169) ENSCARG00000000176 gga3a (ENSCARG00000000431) ENSCARG00000000701 jpt1a (ENSCARG00000000708) ENSCARG00000000716 ENSCARG00000000729 septin9b (ENSCARG00000000768) ENSCARG00000000881 rhbdl3 (ENSCARG00000000921) #20 znf207b (ENSCARG00000000945) #22 cd7al (ENSCARG00000001028) rhot1b (ENSCARG00000001065) tefm (ENSCARG00000001139) atad5b (ENSCARG00000001148) suz12b (ENSCARG00000001174) rab11fip4b (ENSCARG00000001234) trim25 (ENSCARG00000001262) dgke (ENSCARG00000001313) si:dkey-31g6.6 (ENSCARG00000001334) cbx8b (ENSCARG00000001339) CBX4 (ENSCARG00000001347) ENSCARG00000001351 ENSCARG00000001353 ppp1r27b (ENSCARG00000001356) p4hb (ENSCARG00000001428) Zebrafish MODERN SPECIES 21 cfap52 (ENSDARG00000101679) usp43a (ENSDARG00000103494) MCHR1 (ENSDARG00000104093) grb2a (ENSDARG00000105276) mif4gda (ENSDARG00000102080) gga3a (ENSDARG00000103667) ENSDARG00000104390 jpt1a (ENSDARG00000099387) zgc:174863 (ENSDARG00000099476) ENSDARG00000101654 si:rp71-81e14.2 (ENSDARG00000103077) ENSDARG00000113706 septin9b (ENSDARG00000103900) ENSDARG00000103851 rhbdl3 (ENSDARG00000105190) #20 znf207b (ENSDARG00000101277) #22 cd7al (ENSDARG00000098787) rhot1b (ENSDARG00000103313) tefm (ENSDARG00000100548) atad5b (ENSDARG00000101126) suz12b (ENSDARG00000098924) utp6 (ENSDARG00000098433) ENSDARG00000099307 ENSDARG00000102218 rab11fip4b (ENSDARG00000103207) trim25 (ENSDARG00000104396) dgke (ENSDARG00000104793) si:dkey-31g6.6 (ENSDARG00000101393) cbx8b (ENSDARG00000098771) ENSDARG00000103485 ccdc40 (ENSDARG00000100584) Clupeiformes ANCESTRAL SPECIES 266 ENSGT00950000182951.A.a.b.a ENSGT00940000166105 ENSGT01060000248591.a.a.a.b.b ENSGT00940000158756 ENSGT00940000153560.b.b.b.h ENSGT00940000159653.g.b ENSGT00510000048561 ENSGT00940000157367.a.b ENSGT00940000160024 ENSGT00730000111057.d #22 ENSGT01030000235061 ENSGT00940000161451.a.a ENSGT00940000156270 ENSGT00390000009265 ENSGT00390000015948.b ENSGT00390000014512 ENSGT00390000008848 ENSGT00940000157935.a ENSGT00940000154406 ENSGT00390000013639 ENSGT00940000157889.g.b ENSGT00940000157057.e Atlantic herring MODERN SPECIES 18 ENSCHAG00000008668 ENSCHAG00000008619 ENSCHAG00000008563 ENSCHAG00000008496 ENSCHAG00000008383 ENSCHAG00000008312 ENSCHAG00000008295 ENSCHAG00000007855 nptxrb (ENSCHAG00000007834) cbx6a (ENSCHAG00000007811) pla2g6 (ENSCHAG00000007281) pvalb7 (ENSCHAG00000007266) ncf4 (ENSCHAG00000007221) ENSCHAG00000007213 ENSCHAG00000007097 znf207b (ENSCHAG00000007086) #22 ENSCHAG00000007062 adra2a (ENSCHAG00000007044) shoc2 (ENSCHAG00000007026) bbip1 (ENSCHAG00000007014) pdcd4b (ENSCHAG00000006130) mrpl4 (ENSCHAG00000006062) ENSCHAG00000006050 ENSCHAG00000006014 ptp4a1 (ENSCHAG00000005953) lgsn (ENSCHAG00000005933) ENSCHAG00000005895 myom2a (ENSCHAG00000003069) ENSCHAG00000002924 notum2 (ENSCHAG00000002740) coq7 (ENSCHAG00000027574) Denticle herring MODERN SPECIES 13 TMC7 (ENSDCDG00000015016) ENSDCDG00000015011 LOXL4 (ENSDCDG00000014998) HNRNPLL (ENSDCDG00000013917) ENSDCDG00000013835 GEMIN6 (ENSDCDG00000013832) sos1 (ENSDCDG00000008509) ENSDCDG00000008411 tpcn3 (ENSDCDG00000006159) pgap4 (ENSDCDG00000005720) mala.1 (ENSDCDG00000005711) slc8a1a (ENSDCDG00000005672) tmem178a (ENSDCDG00000005640) ENSDCDG00000005635 ENSDCDG00000005634 znf207b (ENSDCDG00000005631) #22 cd7al (ENSDCDG00000005626) ENSDCDG00000005623 ENSDCDG00000005621 adra2a (ENSDCDG00000005618) shoc2 (ENSDCDG00000005616) bbip1 (ENSDCDG00000005612) pdcd4b (ENSDCDG00000005544) mrpl4 (ENSDCDG00000005531) ENSDCDG00000005526 col9a1a (ENSDCDG00000005521) ptp4a1 (ENSDCDG00000005511) lgsn (ENSDCDG00000005510) myom2a (ENSDCDG00000002544) usp43a (ENSDCDG00000002403) cfap52 (ENSDCDG00000002396) Euteleosteomorpha ANCESTRAL SPECIES 18 ENSGT00440000033742.a.b.c ENSGT00980000203447 ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000164538 ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073890 ENSGT00940000164904.a ENSGT00950000182895.a.a.a.b ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00940000153882.a.b.a ENSGT00530000063753.B.d ENSGT00530000063753.A.b Acanthomorphata ANCESTRAL SPECIES 40 ENSGT00940000157552.s.a ENSGT00390000004368 ENSGT00390000000053.a ENSGT00940000158145.a ENSGT00940000173081 ENSGT00940000166223.b.a ENSGT00440000033742.a.b.c ENSGT00980000203447 ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073890 ENSGT00940000164904.a ENSGT00950000182895.b.b ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00940000153882.a.a ENSGT00530000063753.B.c ENSGT00940000178527 Euacanthomorphacea ANCESTRAL SPECIES 3 ENSGT00390000004368 ENSGT00390000000053.a ENSGT00940000158145.a ENSGT00940000173081 ENSGT00940000166223.b.a ENSGT00940000154739.A ENSGT00440000033742.a.b.c ENSGT00980000203447 ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073890 ENSGT00940000164904.a ENSGT00950000182895.b.b ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00940000153882.a.a ENSGT00530000063753.B.c ENSGT00940000178527 Percomorphaceae ANCESTRAL SPECIES 17 ENSGT00390000004368 ENSGT00390000000053.a ENSGT00940000158145.a ENSGT00390000009016 ENSGT00940000166223.b.a ENSGT00940000154739.A ENSGT00440000033742.a.b.c ENSGT00980000203447 ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073890 ENSGT00940000164904.a ENSGT00950000182895.b.b ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT00940000162179.e.b.a.a.b ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00940000153882.a.a ENSGT00530000063753.B.c Percomorphaceae_B ANCESTRAL SPECIES ENSGT00940000166223.b.b.b ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.a ENSGT00940000166223.b.a ENSGT00940000170963 ENSGT00440000033742.a.b.c ENSGT00980000203447 ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073399 ENSGT00540000073890 ENSGT00940000164904.a ENSGT00950000182895.b.b ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT01100000263505.b.b.a.b.a.a.a.b.b.a ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00940000153882.a.a Percomorphaceae_C ANCESTRAL SPECIES 3 ENSGT00390000009016 ENSGT00940000166223.b.b.b ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.a ENSGT00940000166223.b.a ENSGT00940000170963 ENSGT00440000033742.a.b.c ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073399 ENSGT00540000073890 ENSGT00940000164904.a ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT01100000263505.b.b.a.b.a.a.a.b.b.a ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00940000153882.a.a ENSGT00530000063753.B.c Eupercaria ANCESTRAL SPECIES 2 ENSGT00940000166223.b.b.b ENSGT00940000173081 ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.a ENSGT00940000166223.b.a ENSGT00940000170963 ENSGT00440000033742.a.b.c ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073399 ENSGT00540000073890 ENSGT00940000164904.a ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT00940000156207.b.c.b ENSGT01100000263505.b.b.a.b.a.a.a.b.b.a ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00940000153882.a.a Tetraodontidae ANCESTRAL SPECIES 95 ENSGT00440000033742.a.b.c ENSGT00390000016493 ENSGT00390000012364.b ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT01030000237534 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073890 ENSGT00940000164904.a ENSGT00940000157333.a ENSGT00940000155738 ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT00940000156207.b.c.b Fugu MODERN SPECIES 8 tacr3 (ENSTRUG00000017556) bdh2 (ENSTRUG00000010690) ENSTRUG00000010782 cisd2 (ENSTRUG00000010955) dctd (ENSTRUG00000010985) scpp3c (ENSTRUG00000010197) vegfc (ENSTRUG00000011792) ENSTRUG00000011908 rab11fip4b (ENSTRUG00000011924) utp6 (ENSTRUG00000012005) suz12b (ENSTRUG00000012137) tefm (ENSTRUG00000012221) ENSTRUG00000012247 rhot1b (ENSTRUG00000012264) rhbdl3 (ENSTRUG00000012487) #20 znf207b (ENSTRUG00000021140) #22 ENSTRUG00000025813 ENSTRUG00000012583 septin9b (ENSTRUG00000012787) ENSTRUG00000023566 jpt1a (ENSTRUG00000027712) gga3a (ENSTRUG00000012928) ENSTRUG00000020448 MCHR1 (ENSTRUG00000013112) usp43a (ENSTRUG00000013149) cfap52 (ENSTRUG00000013165) ENSTRUG00000024968 ENSTRUG00000013263 stx8 (ENSTRUG00000019652) ENSTRUG00000013381 ENSTRUG00000020036 Tetraodon MODERN SPECIES 26 tshz3b (ENSTNIG00000004737) ZNF507 (ENSTNIG00000003653) DPY19L3 (ENSTNIG00000004332) ENSTNIG00000014203 dhcr7 (ENSTNIG00000010127) MMP15 (ENSTNIG00000010128) ENSTNIG00000010129 slc7a6os (ENSTNIG00000010130) slc7a6 (ENSTNIG00000010131) ENSTNIG00000010132 SYAP1 (ENSTNIG00000010133) phospho2 (ENSTNIG00000010134) CDH8 (ENSTNIG00000010135) vegfc (ENSTNIG00000003882) rhbdl3 (ENSTNIG00000003721) #20 znf207b (ENSTNIG00000003722) #22 ENSTNIG00000004177 ENSTNIG00000004178 ENSTNIG00000001660 rab11fip4b (ENSTNIG00000003236) utp6 (ENSTNIG00000003235) suz12b (ENSTNIG00000003234) tefm (ENSTNIG00000003233) ENSTNIG00000003232 rhot1b (ENSTNIG00000003231) ENSTNIG00000003230 #20 ENSTNIG00000006228 tppp2 (ENSTNIG00000006227) KCNJ10 (ENSTNIG00000006226) ca10a (ENSTNIG00000006082) ENSTNIG00000000216 Eupecaria_A ANCESTRAL SPECIES 3 ENSGT00940000166223.b.b.b ENSGT00940000173081 ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.a ENSGT00940000166223.b.a ENSGT00940000170963 ENSGT00440000033742.a.b.c ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073399 ENSGT00540000073890 ENSGT00940000164904.a ENSGT00950000182895.b.b ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT01100000263505.b.b.a.b.a.a.a.b.b.a ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00940000153882.a.a Ballan wrasse MODERN SPECIES 279 znf207b (ENSLBEG00000009466) #22 ENSLBEG00000009421 ENSLBEG00000009156 septin9b (ENSLBEG00000008643) rbm47 (ENSLBEG00000008436) ENSLBEG00000008373 ENSLBEG00000008353 cntf (ENSLBEG00000008342) ENSLBEG00000008314 ankrd49 (ENSLBEG00000008295) GPR83 (ENSLBEG00000008254) cdk2ap2 (ENSLBEG00000008213) aip (ENSLBEG00000008184) ENSLBEG00000008161 ENSLBEG00000008141 mettl14 (ENSLBEG00000008085) Eupecaria_B ANCESTRAL SPECIES 1 ENSGT00940000166223.b.b.b ENSGT00940000173081 ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.a ENSGT00940000166223.b.a ENSGT00940000170963 ENSGT00440000033742.a.b.c ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073399 ENSGT00540000073890 ENSGT00940000164904.a ENSGT00950000182895.b.b ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT01100000263505.b.b.a.b.a.a.a.b.b.a ENSGT00940000156207.b.c.b ENSGT00410000025739.c.b ENSGT00390000007779 Perciformes ANCESTRAL SPECIES 2 ENSGT00940000158145.a ENSGT00390000009016 ENSGT00940000166223.b.b.b ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.a ENSGT00940000166223.b.a ENSGT00940000170963 ENSGT00440000033742.a.b.c ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073890 ENSGT00940000164904.a ENSGT00950000182895.b.b ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT01100000263505.b.b.a.b.a.a.a.b.b.a ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00940000153882.a.a ENSGT00530000063753.B.c Cottioidei ANCESTRAL SPECIES 3 ENSGT00390000000053.a ENSGT00940000158145.a ENSGT00390000009016 ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.a ENSGT00940000166223.b.a ENSGT00940000170963 ENSGT00440000033742.a.b.c ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073399 ENSGT00540000073890 ENSGT00940000164904.a ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT01100000263505.b.b.a.b.a.a.a.b.b.a ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00940000153882.a.a ENSGT00530000063753.B.c Lumpfish MODERN SPECIES PIK3R6 (ENSCLMG00005007705) PIK3R5 (ENSCLMG00005007684) ENSCLMG00005007655 stx8 (ENSCLMG00005007654) ENSCLMG00005007653 ENSCLMG00005007652 cfap52 (ENSCLMG00005007651) ENSCLMG00005007650 usp43a (ENSCLMG00005007649) MCHR1 (ENSCLMG00005007648) ENSCLMG00005007644 gga3a (ENSCLMG00005007238) ENSCLMG00005007217 jpt1a (ENSCLMG00005007214) ENSCLMG00005007212 znf207b (ENSCLMG00005007209) #22 ENSCLMG00005007203 ENSCLMG00005007199 SEPTIN9 (ENSCLMG00005004805) rhbdl3 (ENSCLMG00005004721) #20 rhot1b (ENSCLMG00005004263) ADAP2 (ENSCLMG00005004236) tefm (ENSCLMG00005004234) ENSCLMG00005004233 suz12b (ENSCLMG00005003443) utp6 (ENSCLMG00005003079) rab11fip4b (ENSCLMG00005002835) ENSCLMG00005002803 ENSCLMG00005002794 ENSCLMG00005009882 ENSCLMG00005009881 Stickleback MODERN SPECIES 4 tspan34 (ENSGACG00000019454) RAB3D (ENSGACG00000019452) pld6 (ENSGACG00000019449) ENSGACG00000019448 ENSGACG00000019446 ENSGACG00000019444 rab11fip4b (ENSGACG00000019442) ENSGACG00000019439 utp6 (ENSGACG00000019424) suz12b (ENSGACG00000019421) ENSGACG00000019420 tefm (ENSGACG00000019419) ENSGACG00000019412 rhot1b (ENSGACG00000019410) rhbdl3 (ENSGACG00000019407) #20 znf207b (ENSGACG00000019406) #22 ENSGACG00000019403 ENSGACG00000019401 septin9b (ENSGACG00000019397) ENSGACG00000019395 jpt1a (ENSGACG00000019394) ENSGACG00000019390 gga3a (ENSGACG00000019388) MCHR1 (ENSGACG00000019387) usp43a (ENSGACG00000019385) cfap52 (ENSGACG00000019382) ENSGACG00000019381 ENSGACG00000019380 ENSGACG00000019379 stx8 (ENSGACG00000019376) ENSGACG00000019374 Perciformes_a ANCESTRAL SPECIES ENSGT00390000009016 ENSGT00940000166223.b.b.b ENSGT00940000166223.b.b.a.b.b ENSGT00940000173081 ENSGT00940000166223.b.b.a.a ENSGT00940000166223.b.a ENSGT00940000170963 ENSGT00440000033742.a.b.c ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073890 ENSGT00940000164904.a ENSGT00950000182895.b.b ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT01100000263505.b.b.a.b.a.a.a.b.b.a ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00940000153882.a.a ENSGT00530000063753.B.c Channel bull blenny MODERN SPECIES ENSCGOG00000021737 ENSCGOG00000021738 ENSCGOG00000021740 ENSCGOG00000021741 ENSCGOG00000021743 ENSCGOG00000021744 rab11fip4b (ENSCGOG00000021749) utp6 (ENSCGOG00000021773) suz12b (ENSCGOG00000022125) ENSCGOG00000022262 tefm (ENSCGOG00000022266) ADAP2 (ENSCGOG00000022268) ENSCGOG00000002627 rhot1b (ENSCGOG00000002899) rhbdl3 (ENSCGOG00000005344) #20 znf207b (ENSCGOG00000005352) #22 ENSCGOG00000005353 ENSCGOG00000005354 septin9b (ENSCGOG00000005394) ENSCGOG00000006057 jpt1a (ENSCGOG00000006062) ENSCGOG00000006067 gga3a (ENSCGOG00000006152) ENSCGOG00000006309 MCHR1 (ENSCGOG00000006311) usp43a (ENSCGOG00000006315) cfap52 (ENSCGOG00000006355) ENSCGOG00000006530 ENSCGOG00000006532 stx8 (ENSCGOG00000006538) ENSCGOG00000006543 Pike perch MODERN SPECIES 8 rhbdl3 (ENSSLUG00000025563) #20 znf207b (ENSSLUG00000025561) #22 ENSSLUG00000025559 ENSSLUG00000025552 ENSSLUG00000025548 septin9b (ENSSLUG00000025534) ENSSLUG00000025518 ENSSLUG00000025515 jpt1a (ENSSLUG00000025510) ENSSLUG00000025497 gga3a (ENSSLUG00000025467) ENSSLUG00000025456 usp43a (ENSSLUG00000025454) cfap52 (ENSSLUG00000025452) ENSSLUG00000025450 ENSSLUG00000025447 ENSSLUG00000025443 Eupecaria_C ANCESTRAL SPECIES 14 ENSGT00940000166223.b.b.b ENSGT00940000173081 ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.a ENSGT00940000166223.b.a ENSGT00940000170963 ENSGT00440000033742.a.b.c ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073399 ENSGT00540000073890 ENSGT00940000164904.a ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT00940000156207.b.c.b ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00940000153882.a.a ENSGT00530000063753.B.c Eupercaria_incertae_sedis ANCESTRAL SPECIES 13 ENSGT00940000158145.a ENSGT00940000173081 ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.a ENSGT00940000166223.b.a ENSGT00940000154739.A ENSGT00440000033742.a.b.c ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073399 ENSGT00540000073890 ENSGT00940000164904.a ENSGT00950000182895.b.b ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT01100000263505.b.b.a.b.a.a.a.b.b.a ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00940000153882.a.a European seabass MODERN SPECIES 20 ENSDLAG00005029455 ENSDLAG00005033110 ENSDLAG00005007954 ENSDLAG00005007949 ENSDLAG00005034675 ENSDLAG00005035100 ENSDLAG00005034931 rab11fip4b (ENSDLAG00005007920) utp6 (ENSDLAG00005006156) suz12b (ENSDLAG00005004294) ENSDLAG00005004151 tefm (ENSDLAG00005004141) ADAP2 (ENSDLAG00005004108) rhot1b (ENSDLAG00005003752) ENSDLAG00005003720 #20 ZNF207 (ENSDLAG00005003655) #22 ENSDLAG00005003636 ENSDLAG00005003586 ENSDLAG00005034661 ENSDLAG00005029626 ENSDLAG00005028853 ENSDLAG00005032254 ENSDLAG00005027227 ENSDLAG00005034017 ENSDLAG00005030812 ENSDLAG00005015292 ENSDLAG00005032462 ENSDLAG00005032841 ENSDLAG00005034542 ENSDLAG00005015315 ENSDLAG00005031155 Large yellow croaker MODERN SPECIES 481 ENSLCRG00005002391 ENSLCRG00005002380 ENSLCRG00005016988 ENSLCRG00005016986 ENSLCRG00005016985 ENSLCRG00005016984 ENSLCRG00005016983 rab11fip4b (ENSLCRG00005016981) utp6 (ENSLCRG00005016941) suz12b (ENSLCRG00005016023) suz12b (ENSLCRG00005016001) ENSLCRG00005015995 rhot1b (ENSLCRG00005013161) tefm (ENSLCRG00005013128) rhbdl3 (ENSLCRG00005013117) #20 ENSLCRG00005013107 #22 ENSLCRG00005013104 ENSLCRG00005013099 septin9b (ENSLCRG00005013050) ENSLCRG00005013044 jpt1a (ENSLCRG00005013043) ENSLCRG00005013036 gga3a (ENSLCRG00005010675) MCHR1 (ENSLCRG00005010627) usp43a (ENSLCRG00005010616) cfap52 (ENSLCRG00005010357) ENSLCRG00005010335 ENSLCRG00005010293 ENSLCRG00005010289 ENSLCRG00005010288 stx8 (ENSLCRG00005010282) Gilthead seabream MODERN SPECIES ENSSAUG00010003869 palm3 (ENSSAUG00010003874) ENSSAUG00010003882 ENSSAUG00010003885 ENSSAUG00010003888 ENSSAUG00010003889 ENSSAUG00010003893 rab11fip4b (ENSSAUG00010003901) utp6 (ENSSAUG00010003949) suz12b (ENSSAUG00010005716) atad5b (ENSSAUG00010007668) tefm (ENSSAUG00010007670) ADAP2 (ENSSAUG00010007671) rhot1b (ENSSAUG00010007761) rhbdl3 (ENSSAUG00010009996) #20 znf207b (ENSSAUG00010010002) #22 ENSSAUG00010010008 ENSSAUG00010010009 septin9b (ENSSAUG00010010017) ENSSAUG00010010032 ENSSAUG00010010037 jpt1a (ENSSAUG00010010050) ENSSAUG00010010057 gga3a (ENSSAUG00010010091) ENSSAUG00010010128 MCHR1 (ENSSAUG00010010130) usp43a (ENSSAUG00010010137) cfap52 (ENSSAUG00010010154) ENSSAUG00010010201 ENSSAUG00010010205 stx8 (ENSSAUG00010010212) Percomorphaceae_D ANCESTRAL SPECIES ENSGT00390000009016 ENSGT00940000166223.b.b.b.b ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.a ENSGT00940000166223.b.a ENSGT00940000170963 ENSGT00440000033742.a.b.c ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073399 ENSGT00540000073890 ENSGT00940000164904.a ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT01100000263505.b.b.a.b.a.a.a.b.b.a ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00940000153882.a.a ENSGT00530000063753.B.c Anabantaria ANCESTRAL SPECIES 1 ENSGT00940000158145.a ENSGT00390000009016 ENSGT00940000166223.b.b.b.b ENSGT00940000173081 ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.a.b.b ENSGT00940000170963 ENSGT00440000033742.a.b.c ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073890 ENSGT00940000164904.a ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT01100000263505.b.b.a.b.a.a.a.b.b.a ENSGT00410000025739.c.b ENSGT00940000169384 ENSGT00940000153882.a.a ENSGT00530000063753.B.c ENSGT00530000063753.A.a Anabantoidei ANCESTRAL SPECIES ENSGT00390000004368 ENSGT00390000000053.a ENSGT00940000158145.a ENSGT00940000173081 ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.a.b.b ENSGT00940000170963 ENSGT00440000033742.a.b.c ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073890 ENSGT00940000164904.a ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT01100000263505.b.b.a.b.a.a.a.b.b.a ENSGT00410000025739.c.b ENSGT00940000169384 ENSGT00940000153882.a.a ENSGT00530000063753.B.c ENSGT00530000063753.A.a Climbing perch MODERN SPECIES ENSATEG00000026771 ENSATEG00000029063 ENSATEG00000003223 ENSATEG00000003237 ENSATEG00000029656 ENSATEG00000025517 ENSATEG00000027070 ENSATEG00000025427 rab11fip4b (ENSATEG00000003361) utp6 (ENSATEG00000003401) suz12b (ENSATEG00000003420) tefm (ENSATEG00000003433) ENSATEG00000003436 rhot1b (ENSATEG00000003445) ENSATEG00000003535 #20 ZNF207 (ENSATEG00000003586) #22 ENSATEG00000003647 ENSATEG00000003656 septin9b (ENSATEG00000003815) ENSATEG00000003842 ENSATEG00000003851 ENSATEG00000003866 gga3a (ENSATEG00000003888) ENSATEG00000003892 usp43a (ENSATEG00000003927) cfap52 (ENSATEG00000003938) ENSATEG00000004007 ENSATEG00000004045 ENSATEG00000004048 ENSATEG00000025504 PIK3R5 (ENSATEG00000004096) Siamese fighting fish MODERN SPECIES tspan34 (ENSBSLG00000016418) ENSBSLG00000016412 pld6 (ENSBSLG00000016408) elof1 (ENSBSLG00000016406) PLPPR2 (ENSBSLG00000016392) ENSBSLG00000016386 ENSBSLG00000016383 rab11fip4b (ENSBSLG00000016379) utp6 (ENSBSLG00000016328) suz12b (ENSBSLG00000016146) ENSBSLG00000016124 tefm (ENSBSLG00000016121) ADAP2 (ENSBSLG00000016113) rhot1b (ENSBSLG00000014548) rhbdl3 (ENSBSLG00000014472) #20 znf207b (ENSBSLG00000014458) #22 ENSBSLG00000014454 ENSBSLG00000014116 septin9b (ENSBSLG00000013386) ENSBSLG00000013107 jpt1a (ENSBSLG00000012534) ENSBSLG00000012514 gga3a (ENSBSLG00000012214) MCHR1 (ENSBSLG00000012193) usp43a (ENSBSLG00000012038) ENSBSLG00000012003 cfap52 (ENSBSLG00000011895) ENSBSLG00000011849 ENSBSLG00000011814 ENSBSLG00000011663 PIK3R5 (ENSBSLG00000011605) Zig-zag eel MODERN SPECIES ENSMAMG00000002383 ENSMAMG00000002329 ENSMAMG00000002317 ENSMAMG00000025769 ENSMAMG00000002299 ENSMAMG00000002293 ENSMAMG00000002283 rab11fip4b (ENSMAMG00000002250) utp6 (ENSMAMG00000002228) suz12b (ENSMAMG00000002116) atad5b (ENSMAMG00000002077) tefm (ENSMAMG00000002036) ADAP2 (ENSMAMG00000002026) rhot1b (ENSMAMG00000001848) ENSMAMG00000001798 #20 ZNF207 (ENSMAMG00000001762) #22 ENSMAMG00000001718 ENSMAMG00000001641 jpt1a (ENSMAMG00000025584) ENSMAMG00000025735 gga3a (ENSMAMG00000001534) ENSMAMG00000001509 usp43a (ENSMAMG00000001482) cfap52 (ENSMAMG00000001429) ENSMAMG00000026912 ENSMAMG00000001399 ENSMAMG00000001383 ENSMAMG00000001334 PIK3R5 (ENSMAMG00000001297) PIK3R6 (ENSMAMG00000001266) ENSMAMG00000001241 Carangaria ANCESTRAL SPECIES ENSGT00390000009016 ENSGT00940000166223.b.b.b.a ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.a ENSGT00940000166223.b.a ENSGT00940000170963 ENSGT00440000033742.a.b.c ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073399 ENSGT00540000073890 ENSGT00940000164904.a ENSGT00950000182895.b.b ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT01100000263505.b.b.a.b.a.a.a.b.b.a ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00940000153882.a.a Carangaria_A ANCESTRAL SPECIES 14 ENSGT00940000166223.b.b.b.b ENSGT00940000166223.b.b.b.a ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.a ENSGT00940000166223.b.a ENSGT00940000170963 ENSGT00440000033742.a.b.c ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073399 ENSGT00540000073890 ENSGT00940000164904.a ENSGT00950000182895.b.b ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT01100000263505.b.b.a.b.a.a.a.b.b.a ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00940000153882.a.a Seriola ANCESTRAL SPECIES 29 ENSGT00390000009016 ENSGT00940000166223.b.b.b.b ENSGT00940000166223.b.b.b.a ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.a ENSGT00940000166223.b.a ENSGT00940000170963 ENSGT00440000033742.a.b.c ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 Greater amberjack MODERN SPECIES 214 elof1 (ENSSDUG00000023329) PLPPR2 (ENSSDUG00000023337) ENSSDUG00000023343 ENSSDUG00000000165 ENSSDUG00000000196 ENSSDUG00000000216 ENSSDUG00000000220 rab11fip4b (ENSSDUG00000000230) utp6 (ENSSDUG00000000329) suz12b (ENSSDUG00000000347) atad5b (ENSSDUG00000000425) tefm (ENSSDUG00000000479) ADAP2 (ENSSDUG00000000499) rhot1b (ENSSDUG00000000579) rhbdl3 (ENSSDUG00000000665) #20 znf207b (ENSSDUG00000000711) #22 ENSSDUG00000000717 Yellowtail amberjack MODERN SPECIES 2340 PLPPR2 (ENSSLDG00000016924) ENSSLDG00000016902 ENSSLDG00000016893 ENSSLDG00000016883 ENSSLDG00000016871 ENSSLDG00000016861 ENSSLDG00000016841 rab11fip4b (ENSSLDG00000016782) utp6 (ENSSLDG00000016724) suz12b (ENSSLDG00000016660) ENSSLDG00000016618 tefm (ENSSLDG00000016602) ADAP2 (ENSSLDG00000016530) rhot1b (ENSSLDG00000016424) rhbdl3 (ENSSLDG00000016345) #20 znf207b (ENSSLDG00000016311) #22 ENSSLDG00000016296 Barramundi perch MODERN SPECIES 113 ENSLCAG00010025188 ENSLCAG00010025186 ENSLCAG00010025183 ENSLCAG00010025178 ENSLCAG00010025175 ENSLCAG00010025173 ENSLCAG00010025170 ENSLCAG00010025165 rab11fip4b (ENSLCAG00010025156) ENSLCAG00010025143 suz12b (ENSLCAG00010025043) tefm (ENSLCAG00010024963) ADAP2 (ENSLCAG00010024959) rhot1b (ENSLCAG00010024943) rhbdl3 (ENSLCAG00010024929) #20 znf207b (ENSLCAG00010024918) #22 ENSLCAG00010024915 ENSLCAG00010024911 septin9b (ENSLCAG00010024888) ENSLCAG00010024862 jpt1a (ENSLCAG00010024843) ENSLCAG00010024813 gga3a (ENSLCAG00010024777) MCHR1 (ENSLCAG00010024764) usp43a (ENSLCAG00010024756) cfap52 (ENSLCAG00010024740) ENSLCAG00010024727 ENSLCAG00010024721 stx8 (ENSLCAG00010024716) ENSLCAG00010024705 PIK3R5 (ENSLCAG00010024665) Pleuronectoidei ANCESTRAL SPECIES 21 ENSGT00390000004368 ENSGT00390000000053.a ENSGT00940000158145.a ENSGT00390000009016 ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.a ENSGT00940000170963 ENSGT00440000033742.a.b.c ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073890 ENSGT00940000164904.a ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT01100000263505.b.b.a.b.a.a.a.b.b.a ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00940000153882.a.a ENSGT00530000063753.B.c ENSGT00530000063753.A.a Turbot MODERN SPECIES 20 ENSSMAG00000027463 ENSSMAG00000014699 ENSSMAG00000014707 ENSSMAG00000023360 ENSSMAG00000014725 ENSSMAG00000014733 ENSSMAG00000014736 rab11fip4b (ENSSMAG00000014743) utp6 (ENSSMAG00000014772) suz12b (ENSSMAG00000014804) ENSSMAG00000014855 tefm (ENSSMAG00000014888) ADAP2 (ENSSMAG00000014907) rhot1b (ENSSMAG00000014924) ENSSMAG00000015004 #20 ZNF207 (ENSSMAG00000015036) #22 ENSSMAG00000015145 septin9b (ENSSMAG00000015231) ENSSMAG00000015332 jpt1a (ENSSMAG00000015343) ENSSMAG00000015357 gga3a (ENSSMAG00000015376) ENSSMAG00000015467 usp43a (ENSSMAG00000015494) cfap52 (ENSSMAG00000015516) ENSSMAG00000015545 ENSSMAG00000015558 stx8 (ENSSMAG00000015582) ENSSMAG00000015608 PIK3R5 (ENSSMAG00000015653) ENSSMAG00000024963 Tongue sole MODERN SPECIES 19 zgc:136472 (ENSCSEG00000003819) pdia2 (ENSCSEG00000003826) TMEM131L (ENSCSEG00000003846) mnd1 (ENSCSEG00000003867) trim2a (ENSCSEG00000003875) FHDC1 (ENSCSEG00000003881) arfip1 (ENSCSEG00000003886) FAM193A (ENSCSEG00000003900) ENSCSEG00000003934 sfrp2 (ENSCSEG00000003938) ENSCSEG00000003942 plrg1 (ENSCSEG00000003964) fgg (ENSCSEG00000003980) rhot1b (ENSCSEG00000003984) rhbdl3 (ENSCSEG00000003993) #20 znf207b (ENSCSEG00000004003) #22 dctpp1 (ENSCSEG00000004006) gatb (ENSCSEG00000004009) FHIP1A (ENSCSEG00000004024) chtf18 (ENSCSEG00000004033) gng13a (ENSCSEG00000004050) ENSCSEG00000004060 socs1b (ENSCSEG00000004063) prkcba (ENSCSEG00000004071) ENSCSEG00000004080 RBBP6 (ENSCSEG00000004085) ENSCSEG00000004093 ENSCSEG00000004099 ENSCSEG00000004103 FBXW7 (ENSCSEG00000004108) ENSCSEG00000004118 Ovalentaria ANCESTRAL SPECIES ENSGT00940000166223.b.b.b ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.a ENSGT00940000166223.b.a ENSGT00940000170963 ENSGT00440000033742.a.b.c ENSGT00980000203447 ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073399 ENSGT00540000073890 ENSGT00940000164904.a ENSGT00950000182895.a.a.a.b ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT00940000156207.b.c.b ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00940000153882.a.a Atherinomorphae ANCESTRAL SPECIES 20 ENSGT00940000166223.b.b.b ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.a ENSGT00940000166223.b.a ENSGT00940000154739.A ENSGT00940000170963 ENSGT00440000033742.a.b.c ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073890 ENSGT00940000164904.a ENSGT00950000182895.a.a.a.b ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT00940000156207.b.c.b ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00940000153882.a.a ENSGT00530000063753.B.c Cyprinodontiformes ANCESTRAL SPECIES 18 ENSGT00390000010768 ENSGT00940000158046.a.b ENSGT01030000234586.A.b.a ENSGT00650000094757 ENSGT00940000157340.k.a ENSGT00390000017489.b ENSGT00950000183213.a.a.a ENSGT00390000017504 ENSGT00940000160809 ENSGT00530000063960.g.a ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073890 ENSGT00940000164904.a ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT00940000156207.b.c.b ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00940000153882.a.a ENSGT00530000063753.B.c ENSGT00530000063753.A.a Aplocheiloidei ANCESTRAL SPECIES 32 ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b ENSGT01030000234586.A.b.a ENSGT00940000157340.k.a ENSGT00390000017489.b ENSGT00950000183213.a.a.a ENSGT00390000017504 ENSGT00940000160809 ENSGT00530000063960.g.a ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073890 ENSGT00940000164904.a ENSGT00950000182895.b.b ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT00940000156207.b.c.b ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00940000153882.a.a ENSGT00530000063753.B.c Mangrove rivulus MODERN SPECIES 168 myom2a (ENSKMAG00000012595) ENSKMAG00000012648 lgsn (ENSKMAG00000012662) ptp4a1 (ENSKMAG00000012677) ENSKMAG00000012724 mrpl4 (ENSKMAG00000012769) ENSKMAG00000012788 ENSKMAG00000012832 sp2 (ENSKMAG00000012908) socs7 (ENSKMAG00000012966) ENSKMAG00000013011 tefm (ENSKMAG00000013028) ENSKMAG00000013053 RHOT1 (ENSKMAG00000013102) rhbdl3 (ENSKMAG00000013213) #20 znf207b (ENSKMAG00000013273) #22 ENSKMAG00000013314 ENSKMAG00000013346 ENSKMAG00000013418 SEPTIN9 (ENSKMAG00000013474) Turquoise killifish MODERN SPECIES 1617 SOX10 (ENSNFUG00015018941) ENSNFUG00015018937 ENSNFUG00015018933 ENSNFUG00015018928 C3H22ORF32 (ENSNFUG00015018926) zgc:158803 (ENSNFUG00015018917) PANE1 (ENSNFUG00015018910) ENSNFUG00015018909 MB (ENSNFUG00015018903) ENSNFUG00015018896 ENSNFUG00015018883 TEFM (ENSNFUG00015018880) ADAP2 (ENSNFUG00015018721) rhot1b (ENSNFUG00015016726) RHBDL3 (ENSNFUG00015016656) #20 ZNF207B (ENSNFUG00015016638) #22 ENSNFUG00015016633 ENSNFUG00015016596 ENSNFUG00015016589 septin9b (ENSNFUG00015016577) ENSNFUG00015016561 HN1A (ENSNFUG00015016552) ENSNFUG00015016539 GGA3 (ENSNFUG00015014950) MCHR1 (ENSNFUG00015014826) ENSNFUG00015014796 usp43a (ENSNFUG00015014716) cfap52 (ENSNFUG00015013875) ENSNFUG00015013810 STX8 (ENSNFUG00015013791) ENSNFUG00015013686 Cyprinodontoidei ANCESTRAL SPECIES 15 ENSGT00390000010768 ENSGT00940000158046.a.b ENSGT01030000234586.A.b.a ENSGT00650000094757 ENSGT00940000157340.k.a ENSGT00390000017489.b ENSGT00950000183213.a.a.a ENSGT00390000017504 ENSGT00940000160809 ENSGT00530000063960.g.a ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073890 ENSGT00940000164904.a ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT00940000156207.b.c.b ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00940000153882.a.a ENSGT00530000063753.B.c ENSGT00530000063753.A.a Poeciliinae ANCESTRAL SPECIES 9 ENSGT00390000010768 ENSGT00940000158046.a.b ENSGT01030000234586.A.b.a ENSGT00650000094757 ENSGT00940000157340.k.a ENSGT00390000017489.b ENSGT00950000183213.a.a.a ENSGT00390000017504 ENSGT00940000160809 ENSGT00530000063960.g.a ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073890 ENSGT00940000164904.a ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016.d ENSGT00940000156207.b.c.b ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00940000153882.a.a ENSGT00530000063753.B.c ENSGT00530000063753.A.a Poecilia ANCESTRAL SPECIES 6 ENSGT00390000010768 ENSGT00940000158046.a.b ENSGT01030000234586.A.b.a ENSGT00650000094757 ENSGT00940000157340.k.a ENSGT00390000017489.b ENSGT00950000183213.a.a.a ENSGT00390000017504 ENSGT00940000160809 ENSGT00530000063960.g.a ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073890 ENSGT00940000164904.a ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016.d ENSGT00940000156207.b.c.b ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00940000153882.a.a ENSGT00530000063753.B.c ENSGT00530000063753.A.a NAME_6 ANCESTRAL SPECIES 47 ENSGT00390000010768 ENSGT00940000158046.a.b ENSGT01030000234586.A.b.a ENSGT00650000094757 ENSGT00940000157340.k.a ENSGT00390000017489.b ENSGT00950000183213.a.a.a ENSGT00390000017504 ENSGT00940000160809 ENSGT00530000063960.g.a ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n Amazon molly MODERN SPECIES 295 rnaseh2a (ENSPFOG00000012627) ENSPFOG00000012609 ENSPFOG00000012599 ENSPFOG00000021920 ENSPFOG00000012509 smdt1b (ENSPFOG00000012495) zgc:158803 (ENSPFOG00000012437) ENSPFOG00000012395 mb (ENSPFOG00000012371) serhl (ENSPFOG00000012304) ENSPFOG00000024340 tefm (ENSPFOG00000012276) ENSPFOG00000012190 rhot1b (ENSPFOG00000011965) rhbdl3 (ENSPFOG00000011887) #20 znf207b (ENSPFOG00000011831) #22 ENSPFOG00000011825 ENSPFOG00000011590 SEPTIN9 (ENSPFOG00000011500) Sailfin molly MODERN SPECIES 868 ENSPLAG00000006719 unc50 (ENSPLAG00000006749) ndufs1 (ENSPLAG00000006809) zgc:110699 (ENSPLAG00000006846) ENSPLAG00000006870 atg13 (ENSPLAG00000006930) znf207b (ENSPLAG00000006943) #22 ENSPLAG00000006992 Guppy MODERN SPECIES 439 atg4da (ENSPREG00000014939) MAST1 (ENSPREG00000014975) rnaseh2a (ENSPREG00000015015) ENSPREG00000015036 ENSPREG00000015145 ENSPREG00000015510 smdt1b (ENSPREG00000015520) zgc:158803 (ENSPREG00000015528) ENSPREG00000015549 mb (ENSPREG00000015563) serhl (ENSPREG00000015573) tefm (ENSPREG00000015588) ENSPREG00000015612 rhot1b (ENSPREG00000015704) rhbdl3 (ENSPREG00000015762) #20 znf207b (ENSPREG00000015781) #22 ENSPREG00000015823 septin9b (ENSPREG00000016106) ENSPREG00000016568 jpt1a (ENSPREG00000016581) ENSPREG00000016597 gga3a (ENSPREG00000016612) MCHR1 (ENSPREG00000016632) usp43a (ENSPREG00000016669) ENSPREG00000016699 ENSPREG00000016705 ENSPREG00000016720 stx8 (ENSPREG00000016746) ENSPREG00000016771 ENSPREG00000016810 PIK3R5 (ENSPREG00000016844) Platyfish MODERN SPECIES 19 MAST1 (ENSXMAG00000006970) ENSXMAG00000027436 rnaseh2a (ENSXMAG00000006953) ENSXMAG00000021473 ENSXMAG00000006940 ENSXMAG00000006923 ENSXMAG00000022941 zgc:158803 (ENSXMAG00000006903) ENSXMAG00000006894 mb (ENSXMAG00000025476) serhl (ENSXMAG00000006867) tefm (ENSXMAG00000022217) ENSXMAG00000006859 rhot1b (ENSXMAG00000006814) rhbdl3 (ENSXMAG00000006787) #20 znf207b (ENSXMAG00000006766) #22 ENSXMAG00000025886 ENSXMAG00000006739 septin9b (ENSXMAG00000028828) ENSXMAG00000027527 jpt1a (ENSXMAG00000006711) ENSXMAG00000006702 gga3a (ENSXMAG00000006648) MCHR1 (ENSXMAG00000010578) usp43a (ENSXMAG00000006635) cfap52 (ENSXMAG00000026073) ENSXMAG00000022952 ENSXMAG00000005229 stx8 (ENSXMAG00000005222) ENSXMAG00000006621 ENSXMAG00000028650 NAME_4 ANCESTRAL SPECIES 73 ENSGT00530000063000.a.a.b.j ENSGT00940000157700.c ENSGT00390000010768 ENSGT00940000158046.a.b ENSGT01030000234586.A.b.a ENSGT00940000157340.k.a ENSGT00390000017489.b ENSGT00950000183213.a.a.a ENSGT00390000017504 ENSGT00940000160809 ENSGT00530000063960.g.a ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073890 ENSGT00940000164904.a ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT00940000156207.b.c.b ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00940000153882.a.a ENSGT00530000063753.B.c ENSGT00530000063753.A.a Mummichog MODERN SPECIES 2310 ENSFHEG00000004059 RHOT1 (ENSFHEG00000004037) rhbdl3 (ENSFHEG00000003965) #20 znf207b (ENSFHEG00000003929) #22 ENSFHEG00000003911 ENSFHEG00000003901 septin9b (ENSFHEG00000003866) ENSFHEG00000003845 jpt1a (ENSFHEG00000000583) ENSFHEG00000003818 gga3a (ENSFHEG00000003806) MCHR1 (ENSFHEG00000003796) usp43a (ENSFHEG00000003785) cfap52 (ENSFHEG00000003772) ENSFHEG00000003745 ENSFHEG00000003731 ENSFHEG00000003726 stx8 (ENSFHEG00000003701) ENSFHEG00000003658 Sheepshead minnow MODERN SPECIES 1459 ENSCVAG00000010202 tefm (ENSCVAG00000010216) ENSCVAG00000010235 ENSCVAG00000010243 RHOT1 (ENSCVAG00000010258) rhbdl3 (ENSCVAG00000010297) #20 znf207b (ENSCVAG00000010305) #22 PKN1 (ENSCVAG00000010333) Oryzias ANCESTRAL SPECIES 15 ENSGT00940000158145.a ENSGT00940000173081 ENSGT00940000166223.b.b.b ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.a.a ENSGT00940000166223.b.a ENSGT00940000154739.A ENSGT00440000033742.a.b.c ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073890 ENSGT00940000164904.a ENSGT00950000182895.a.a.a.b ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00940000153882.a.a ENSGT00530000063753.B.c ENSGT00530000063753.A.a ENSGT00440000038745.a.a.a Oryzias_b ANCESTRAL SPECIES 29 ENSGT00940000173081 ENSGT00940000166223.b.b.b ENSGT00940000178623 ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.a.a ENSGT00940000166223.b.a ENSGT00940000154739.A ENSGT00440000033742.a.b.c ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073890 ENSGT00940000164904.a ENSGT00950000182895.a.a.a.b ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00940000153882.a.a ENSGT00530000063753.B.c ENSGT00530000063753.A.a ENSGT00440000038745.a.a.a Javanese ricefish MODERN SPECIES ENSOJAG00000021984 ENSOJAG00000021989 ENSOJAG00000022022 ENSOJAG00000022025 ENSOJAG00000022034 ENSOJAG00000022047 ENSOJAG00000022052 rab11fip4b (ENSOJAG00000022062) utp6 (ENSOJAG00000022106) suz12b (ENSOJAG00000022167) ENSOJAG00000003629 tefm (ENSOJAG00000003672) ADAP2 (ENSOJAG00000003709) rhot1b (ENSOJAG00000004165) rhbdl3 (ENSOJAG00000006096) #20 znf207b (ENSOJAG00000006165) #22 ENSOJAG00000006216 septin9b (ENSOJAG00000006510) ENSOJAG00000006904 jpt1a (ENSOJAG00000006923) ENSOJAG00000006946 gga3a (ENSOJAG00000007034) MCHR1 (ENSOJAG00000007256) usp43a (ENSOJAG00000007309) cfap52 (ENSOJAG00000007481) ENSOJAG00000007861 stx8 (ENSOJAG00000007877) ENSOJAG00000007897 PIK3R5 (ENSOJAG00000007977) PIK3R6 (ENSOJAG00000008366) pik3r6a (ENSOJAG00000008381) Indian medaka MODERN SPECIES 21 RAB3D (ENSOMEG00000017217) pld6 (ENSOMEG00000017243) elof1 (ENSOMEG00000017257) ENSOMEG00000017303 ENSOMEG00000017349 ENSOMEG00000000737 ENSOMEG00000000429 ENSOMEG00000017390 rab11fip4b (ENSOMEG00000017420) utp6 (ENSOMEG00000017487) suz12b (ENSOMEG00000017539) tefm (ENSOMEG00000017577) ENSOMEG00000017593 rhot1b (ENSOMEG00000017694) rhbdl3 (ENSOMEG00000017772) #20 znf207b (ENSOMEG00000017833) #22 ENSOMEG00000017952 septin9b (ENSOMEG00000018019) ENSOMEG00000018068 jpt1a (ENSOMEG00000018150) ENSOMEG00000018175 gga3a (ENSOMEG00000018211) MCHR1 (ENSOMEG00000018231) usp43a (ENSOMEG00000018270) cfap52 (ENSOMEG00000018297) ENSOMEG00000018312 stx8 (ENSOMEG00000018329) ENSOMEG00000018373 PIK3R5 (ENSOMEG00000000472) PIK3R6 (ENSOMEG00000018437) pik3r6a (ENSOMEG00000018460) Oryzias_a ANCESTRAL SPECIES 23 ENSGT00940000158145.a ENSGT00940000173081 ENSGT00940000166223.b.b.b ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.a.a ENSGT00940000166223.b.a ENSGT00940000170963 ENSGT00440000033742.a.b.c ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073890 ENSGT00940000164904.a ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00940000153882.a.a ENSGT00530000063753.B.c ENSGT00530000063753.A.a ENSGT00440000038745.a.a.a Japanese Medaka HdrR MODERN SPECIES ENSORLG00000003578 ENSORLG00000028826 ENSORLG00000023503 ENSORLG00000023594 ENSORLG00000023623 ENSORLG00000003566 ENSORLG00000021969 rab11fip4b (ENSORLG00000003560) suz12b (ENSORLG00000003511) atad5b (ENSORLG00000024852) utp6 (ENSORLG00000003546) ENSORLG00000003490 rhot1b (ENSORLG00000003461) ENSORLG00000027878 rhbdl3 (ENSORLG00000003363) #20 znf207b (ENSORLG00000003345) #22 ENSORLG00000003327 ENSORLG00000029753 septin9b (ENSORLG00000003303) ENSORLG00000022685 ENSORLG00000029429 ENSORLG00000021865 ENSORLG00000027391 ENSORLG00000003285 jpt1a (ENSORLG00000023411) sumo2a (ENSORLG00000003279) gga3a (ENSORLG00000003265) MCHR1 (ENSORLG00000003236) usp43a (ENSORLG00000003222) cfap52 (ENSORLG00000003197) ENSORLG00000003161 Chinese medaka MODERN SPECIES 272 dand5 (ENSOSIG00000000234) tspan34 (ENSOSIG00000000238) ENSOSIG00000000243 pld6 (ENSOSIG00000000247) elof1 (ENSOSIG00000000250) ENSOSIG00000000260 ENSOSIG00000000264 ENSOSIG00000000270 rab11fip4b (ENSOSIG00000000285) utp6 (ENSOSIG00000000379) suz12b (ENSOSIG00000000426) tefm (ENSOSIG00000000463) ENSOSIG00000000466 rhot1b (ENSOSIG00000000538) rhbdl3 (ENSOSIG00000007547) #20 znf207b (ENSOSIG00000007554) #22 ENSOSIG00000007565 septin9b (ENSOSIG00000007575) ENSOSIG00000007664 ENSOSIG00000007671 jpt1a (ENSOSIG00000007673) gga3a (ENSOSIG00000007691) MCHR1 (ENSOSIG00000008867) ENSOSIG00000008868 cfap52 (ENSOSIG00000008869) ENSOSIG00000008873 ENSOSIG00000008874 ENSOSIG00000008875 ENSOSIG00000008877 PIK3R5 (ENSOSIG00000008879) PIK3R6 (ENSOSIG00000008881) Ovalentaria_B ANCESTRAL SPECIES 4 ENSGT00940000166223.b.b.b ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.a ENSGT00940000166223.b.a ENSGT00940000170963 ENSGT00440000033742.a.b.c ENSGT00980000203447 ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073399 ENSGT00540000073890 ENSGT00940000164904.a ENSGT00950000182895.b.b ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT01100000263505.b.b.a.b.a.a.a.b.b.a ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00940000153882.a.a Pomacentridae ANCESTRAL SPECIES 8 ENSGT00390000000053.a ENSGT00940000158145.a ENSGT00940000173081 ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.a ENSGT00940000166223.b.a ENSGT00940000170963 ENSGT00440000033742.a.b.c ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073399 ENSGT00540000073890 ENSGT00940000164904.a ENSGT00950000182895.b.b ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT01100000263505.b.b.a.b.a.a.a.b.b.a ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00940000153882.a.a Pomacentridae_A ANCESTRAL SPECIES ENSGT00390000009016 ENSGT00940000166223.b.b.b ENSGT00940000173081 ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.a ENSGT00940000166223.b.a ENSGT00940000170963 ENSGT00440000033742.a.b.c ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073890 ENSGT00940000164904.a ENSGT00950000182895.b.b ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT01100000263505.b.b.a.b.a.a.a.b.b.a ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00940000153882.a.a ENSGT00530000063753.B.c Amphiprion ANCESTRAL SPECIES ENSGT00390000000053.a ENSGT00940000158145.a ENSGT00390000009016 ENSGT00940000166223.b.b.b ENSGT00940000166223.b.b.a.a ENSGT00940000166223.b.a ENSGT00940000170963 ENSGT00440000033742.a.b.c ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073890 ENSGT00940000164904.a ENSGT00950000182895.b.b ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT00940000156207.b.c.b ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00940000153882.a.a ENSGT00530000063753.B.c Clown anemonefish MODERN SPECIES 1395 pld6 (ENSAOCG00000016563) elof1 (ENSAOCG00000016573) ENSAOCG00000016599 ENSAOCG00000016628 ENSAOCG00000016646 ENSAOCG00000016658 ENSAOCG00000016679 rab11fip4b (ENSAOCG00000016771) utp6 (ENSAOCG00000016812) suz12b (ENSAOCG00000016893) atad5b (ENSAOCG00000016967) tefm (ENSAOCG00000016983) ADAP2 (ENSAOCG00000017109) rhot1b (ENSAOCG00000001849) rhbdl3 (ENSAOCG00000017260) #20 znf207b (ENSAOCG00000017286) #22 ENSAOCG00000017294 CAMKMT (ENSAOCG00000017322) prepl (ENSAOCG00000017341) SLC3A1 (ENSAOCG00000017357) ppm1ba (ENSAOCG00000017368) znhit2 (ENSAOCG00000017380) Orange clownfish MODERN SPECIES 17 elof1 (ENSAPEG00000023438) PLPPR2 (ENSAPEG00000023488) ENSAPEG00000023499 ENSAPEG00000023510 ENSAPEG00000023513 ENSAPEG00000023522 ENSAPEG00000023536 rab11fip4b (ENSAPEG00000023546) utp6 (ENSAPEG00000023565) suz12b (ENSAPEG00000023614) atad5b (ENSAPEG00000023656) tefm (ENSAPEG00000023697) ADAP2 (ENSAPEG00000023711) rhot1b (ENSAPEG00000023722) rhbdl3 (ENSAPEG00000023793) #20 znf207b (ENSAPEG00000023830) #22 ENSAPEG00000000321 ENSAPEG00000000350 septin9b (ENSAPEG00000000507) ENSAPEG00000000635 jpt1a (ENSAPEG00000000703) ENSAPEG00000000712 gga3a (ENSAPEG00000000740) ENSAPEG00000000748 MCHR1 (ENSAPEG00000000810) usp43a (ENSAPEG00000000829) cfap52 (ENSAPEG00000000900) ENSAPEG00000000966 ENSAPEG00000000999 stx8 (ENSAPEG00000001007) ENSAPEG00000001024 Spiny chromis MODERN SPECIES 170 elof1 (ENSAPOG00000015455) PLPPR2 (ENSAPOG00000015484) ENSAPOG00000015503 ENSAPOG00000015532 ENSAPOG00000015549 ENSAPOG00000015555 ENSAPOG00000015577 rab11fip4b (ENSAPOG00000015715) utp6 (ENSAPOG00000000435) suz12b (ENSAPOG00000015809) atad5b (ENSAPOG00000015925) tefm (ENSAPOG00000015939) ADAP2 (ENSAPOG00000015949) rhot1b (ENSAPOG00000016056) rhbdl3 (ENSAPOG00000016127) #20 znf207b (ENSAPOG00000016150) #22 ENSAPOG00000016157 ENSAPOG00000016194 ENSAPOG00000016227 Bicolor damselfish MODERN SPECIES 2381 rhbdl3 (ENSSPAG00000021557) #20 znf207b (ENSSPAG00000021550) #22 ENSSPAG00000021542 Cichlidae ANCESTRAL SPECIES 3 ENSGT00940000166223.b.b.b ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.a ENSGT00940000166223.b.a ENSGT00940000170963 ENSGT00440000033742.a.b.c ENSGT00980000203447 ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385.a ENSGT00530000069385.b ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073399 ENSGT00540000073890 ENSGT00940000164904.a ENSGT00950000182895.b.b ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT01100000263505.b.b.a.b.a.a.a.b.b.a ENSGT00410000025739.c.b ENSGT00390000007779 Pseudocrenilabrinae ANCESTRAL SPECIES 3 ENSGT00940000173081 ENSGT00940000166223.b.b.b ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.a ENSGT00940000166223.b.a ENSGT00940000170963 ENSGT00440000033742.a.b.c ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385.a ENSGT00530000069385.b ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073890.m ENSGT00540000073399 ENSGT00540000073890.n ENSGT00940000164904.a ENSGT00950000182895.b.b ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT00940000156207.b.c.b ENSGT00410000025739.c.b Pseudocrenilabrinae_A ANCESTRAL SPECIES 5 ENSGT00940000173081 ENSGT00940000166223.b.b.b ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.a ENSGT00940000166223.b.a ENSGT00940000170963 ENSGT00440000033742.a.b.c ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385.a ENSGT00530000069385.b ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073890.m.b ENSGT00540000073399 ENSGT00540000073890.n.a ENSGT00940000164904.a ENSGT00950000182895.b.b ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT00940000156207.b.c.b ENSGT00410000025739.c.b Haplochromini ANCESTRAL SPECIES 3 ENSGT00940000173081 ENSGT00940000166223.b.b.b ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.a ENSGT00940000166223.b.a ENSGT00940000170963 ENSGT00440000033742.a.b.c ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385.a ENSGT00530000069385.b ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073890.m.b.a ENSGT00540000073890.n.b ENSGT00940000164904.a ENSGT00950000182895.b.b ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT00940000156207.b.c.b ENSGT00410000025739.c.b ENSGT00390000007779 Burton s mouthbrooder MODERN SPECIES 473 ENSHBUG00000018878 ENSHBUG00000018866 ENSHBUG00000018848 ENSHBUG00000018838 ENSHBUG00000000864 ENSHBUG00000018816 ENSHBUG00000018785 ENSHBUG00000018772 rab11fip4b (ENSHBUG00000018745) utp6 (ENSHBUG00000018668) suz12b (ENSHBUG00000018647) tefm (ENSHBUG00000018622) ENSHBUG00000018609 rhot1b (ENSHBUG00000018592) rhbdl3 (ENSHBUG00000018435) #20 znf207b (ENSHBUG00000000549) #22 ENSHBUG00000018341 ENSHBUG00000018326 ENSHBUG00000018310 SEPTIN9 (ENSHBUG00000018286) ENSHBUG00000018195 Haplochromini_A ANCESTRAL SPECIES 2 ENSGT00940000173081 ENSGT00940000166223.b.b.b ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.a ENSGT00940000166223.b.a ENSGT00940000170963 ENSGT00440000033742.a.b.c ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385.a ENSGT00530000069385.b ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073399 ENSGT00540000073890.n.a ENSGT00940000164904.a ENSGT00950000182895.b.b ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT01100000263505.b.b.a.b.a.a.a.b.b.a ENSGT00410000025739.c.b ENSGT00390000007779 Haplochromini_B ANCESTRAL SPECIES 8 ENSGT00940000173081 ENSGT00940000166223.b.b.b ENSGT00940000166223.b.b.a.b.a ENSGT00940000166223.b.b.a.b.b ENSGT00940000166223.b.b.a.a ENSGT00940000166223.b.a ENSGT00940000170963 ENSGT00440000033742.a.b.c ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385.a ENSGT00530000069385.b ENSGT00940000167317 ENSGT00940000157195.n ENSGT01100000263831 ENSGT00540000073890.m.b.a ENSGT00540000073399 ENSGT00540000073890.n.b ENSGT00540000073890.n.a ENSGT00940000164904.a ENSGT00950000182895.b.b ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 Zebra mbuna MODERN SPECIES 1109 PLPPR2 (ENSMZEG00005023885) ENSMZEG00005023886 ENSMZEG00005023887 ENSMZEG00005023888 ENSMZEG00005023889 ENSMZEG00005023890 ENSMZEG00005023891 rab11fip4b (ENSMZEG00005023892) utp6 (ENSMZEG00005023895) suz12b (ENSMZEG00005023896) ENSMZEG00005023897 tefm (ENSMZEG00005023898) ADAP2 (ENSMZEG00005023899) rhot1b (ENSMZEG00005023900) rhbdl3 (ENSMZEG00005023901) #20 znf207b (ENSMZEG00005023902) #22 ENSMZEG00005023903 ENSMZEG00005023904 ENSMZEG00005023905 septin9b (ENSMZEG00005023906) ENSMZEG00005023907 ENSMZEG00005023908 ENSMZEG00005023909 ENSMZEG00005023910 ENSMZEG00005023911 ENSMZEG00005023912 jpt1a (ENSMZEG00005023913) ENSMZEG00005023914 gga3a (ENSMZEG00005023915) MCHR1 (ENSMZEG00005023916) usp43a (ENSMZEG00005023917) Eastern happy MODERN SPECIES 18 ENSACLG00000007225 ENSACLG00000007220 ENSACLG00000007213 ENSACLG00000007210 ENSACLG00000007202 ENSACLG00000007188 rab11fip4b (ENSACLG00000007171) utp6 (ENSACLG00000006728) suz12b (ENSACLG00000006709) ENSACLG00000006700 tefm (ENSACLG00000006693) ENSACLG00000006688 ADAP2 (ENSACLG00000006667) rhot1b (ENSACLG00000006614) rhbdl3 (ENSACLG00000006547) #20 znf207b (ENSACLG00000006507) #22 ENSACLG00000006491 ENSACLG00000006469 septin9b (ENSACLG00000006384) ENSACLG00000006377 ENSACLG00000006371 ENSACLG00000006367 ENSACLG00000006351 jpt1a (ENSACLG00000006343) ENSACLG00000006339 gga3a (ENSACLG00000006297) MCHR1 (ENSACLG00000006275) usp43a (ENSACLG00000006255) cfap52 (ENSACLG00000006235) ENSACLG00000006230 ENSACLG00000006207 P. nyererei MODERN SPECIES 529 ENSPNYG00000002017 ENSPNYG00000002048 ENSPNYG00000002111 ENSPNYG00000002142 ENSPNYG00000002166 ENSPNYG00000002177 ENSPNYG00000002184 rab11fip4b (ENSPNYG00000002204) utp6 (ENSPNYG00000002290) suz12b (ENSPNYG00000002302) ENSPNYG00000002364 tefm (ENSPNYG00000002395) ADAP2 (ENSPNYG00000002401) rhot1b (ENSPNYG00000002437) rhbdl3 (ENSPNYG00000002499) #20 znf207b (ENSPNYG00000002534) #22 ENSPNYG00000002555 ENSPNYG00000002568 ENSPNYG00000002582 SEPTIN9 (ENSPNYG00000002607) Lyretail cichlid MODERN SPECIES 301 ENSNBRG00000019508 ENSNBRG00000019525 ENSNBRG00000019539 ENSNBRG00000019549 ENSNBRG00000019558 ENSNBRG00000019566 ENSNBRG00000019577 ENSNBRG00000019590 rab11fip4b (ENSNBRG00000019615) utp6 (ENSNBRG00000019714) suz12b (ENSNBRG00000000232) tefm (ENSNBRG00000000252) ENSNBRG00000000290 rhot1b (ENSNBRG00000000320) rhbdl3 (ENSNBRG00000000375) #20 znf207b (ENSNBRG00000000407) #22 ENSNBRG00000000418 ENSNBRG00000000452 septin9b (ENSNBRG00000000573) ENSNBRG00000000612 ENSNBRG00000000630 jpt1a (ENSNBRG00000000642) ENSNBRG00000000659 gga3a (ENSNBRG00000000666) MCHR1 (ENSNBRG00000000674) ENSNBRG00000000699 ENSNBRG00000000708 ENSNBRG00000000745 stx8 (ENSNBRG00000000802) ENSNBRG00000000807 PIK3R5 (ENSNBRG00000000824) Nile tilapia MODERN SPECIES 18 PLPPR2 (ENSONIG00000018084) ENSONIG00000032487 ENSONIG00000031268 ENSONIG00000021228 ENSONIG00000021229 ENSONIG00000034302 ENSONIG00000040707 rab11fip4b (ENSONIG00000018085) utp6 (ENSONIG00000018090) suz12b (ENSONIG00000018096) atad5b (ENSONIG00000018102) tefm (ENSONIG00000042983) ADAP2 (ENSONIG00000018106) rhot1b (ENSONIG00000018110) rhbdl3 (ENSONIG00000018113) #20 znf207b (ENSONIG00000018117) #22 ENSONIG00000031668 ENSONIG00000018123 septin9b (ENSONIG00000018125) ENSONIG00000041271 ENSONIG00000028693 ENSONIG00000038898 jpt1a (ENSONIG00000030696) ENSONIG00000041797 ENSONIG00000031471 gga3a (ENSONIG00000018133) MCHR1 (ENSONIG00000018140) ENSONIG00000018141 ENSONIG00000037781 ENSONIG00000018147 stx8 (ENSONIG00000018150) Midas cichlid MODERN SPECIES 1199 ENSACIG00000004010 ENSACIG00000004027 ENSACIG00000004043 ENSACIG00000004057 ENSACIG00000004064 rab11fip4b (ENSACIG00000004079) ENSACIG00000004113 utp6 (ENSACIG00000004124) suz12b (ENSACIG00000004342) atad5b (ENSACIG00000004377) tefm (ENSACIG00000004404) ADAP2 (ENSACIG00000004416) rhot1b (ENSACIG00000004482) rhbdl3 (ENSACIG00000004529) #20 ENSACIG00000004555 znf207b (ENSACIG00000004567) #22 ENSACIG00000004609 ENSACIG00000004621 septin9b (ENSACIG00000004686) ENSACIG00000004704 Tiger tail seahorse MODERN SPECIES 518 elof1 (ENSHCOG00000017140) ENSHCOG00000017174 ENSHCOG00000017190 ENSHCOG00000017194 ENSHCOG00000017207 ENSHCOG00000017219 ENSHCOG00000017222 rab11fip4b (ENSHCOG00000017263) utp6 (ENSHCOG00000017277) suz12b (ENSHCOG00000017321) ENSHCOG00000017350 tefm (ENSHCOG00000017358) ADAP2 (ENSHCOG00000017458) rhot1b (ENSHCOG00000017614) rhbdl3 (ENSHCOG00000017708) #20 znf207b (ENSHCOG00000000625) #22 nuf2 (ENSHCOG00000017788) ENSHCOG00000017791 ENSHCOG00000017802 septin9b (ENSHCOG00000017892) ENSHCOG00000017931 jpt1a (ENSHCOG00000017940) ENSHCOG00000017956 ENSHCOG00000017998 MCHR1 (ENSHCOG00000018028) usp43a (ENSHCOG00000018070) cfap52 (ENSHCOG00000018189) ENSHCOG00000018201 ENSHCOG00000018258 stx8 (ENSHCOG00000018268) ENSHCOG00000018294 Pinecone sodierfish MODERN SPECIES PLPPR2 (ENSMMDG00005024847) ENSMMDG00005024846 ENSMMDG00005024845 ENSMMDG00005024844 ENSMMDG00005024843 ENSMMDG00005024842 ENSMMDG00005024841 rab11fip4b (ENSMMDG00005024840) utp6 (ENSMMDG00005024838) suz12b (ENSMMDG00005024787) ENSMMDG00005024786 tefm (ENSMMDG00005024785) ADAP2 (ENSMMDG00005024784) rhot1b (ENSMMDG00005024770) rhbdl3 (ENSMMDG00005024769) #20 ZNF207 (ENSMMDG00005024768) #22 ENSMMDG00005024767 ENSMMDG00005024766 septin9b (ENSMMDG00005024764) ENSMMDG00005024763 jpt1a (ENSMMDG00005024762) ENSMMDG00005024761 gga3a (ENSMMDG00005024714) ENSMMDG00005024713 MCHR1 (ENSMMDG00005024712) usp43a (ENSMMDG00005024711) cfap52 (ENSMMDG00005024710) ENSMMDG00005024709 ENSMMDG00005024708 ENSMMDG00005024707 stx8 (ENSMMDG00005024706) Cod MODERN SPECIES 16 dand5 (ENSGMOG00000024210) ENSGMOG00000011994 ENSGMOG00000034761 ENSGMOG00000034361 ENSGMOG00000031089 ENSGMOG00000028620 ENSGMOG00000031906 ENSGMOG00000027491 rab11fip4b (ENSGMOG00000011967) utp6 (ENSGMOG00000011958) suz12b (ENSGMOG00000011953) tefm (ENSGMOG00000025857) ENSGMOG00000011930 rhot1b (ENSGMOG00000011919) ENSGMOG00000011915 #20 ZNF207 (ENSGMOG00000011911) #22 ENSGMOG00000027317 septin9b (ENSGMOG00000016635) ENSGMOG00000016627 ENSGMOG00000033585 jpt1a (ENSGMOG00000003961) ENSGMOG00000003952 gga3a (ENSGMOG00000003886) ENSGMOG00000020022 usp43a (ENSGMOG00000027418) ENSGMOG00000023557 cfap52 (ENSGMOG00000018826) ENSGMOG00000024895 ENSGMOG00000022966 ENSGMOG00000018803 stx8 (ENSGMOG00000018789) Protacanthopterygii ANCESTRAL SPECIES 76 ENSGT00940000158914 ENSGT00390000017614.e.a.b ENSGT00940000156166.b.a.b ENSGT00940000153846.a.b ENSGT00940000154912.v ENSGT00940000165172.b ENSGT00440000033742.a.b.c ENSGT00390000016493 ENSGT00390000012364.b ENSGT00940000153469.a.a.l ENSGT00390000010581 ENSGT00940000156498.g.b ENSGT00940000164538 ENSGT00940000155641.g.b ENSGT00940000158838 #20 ENSGT00730000111057.d #22 ENSGT00530000069385 ENSGT00940000167317 ENSGT00940000157195.n ENSGT00540000073890 ENSGT00940000164904.a ENSGT00950000182895.a.a.a.b ENSGT00940000157333.a ENSGT00940000154272.B.a ENSGT00940000158772.a ENSGT00940000157016 ENSGT00410000025739.c.b ENSGT00390000007779 ENSGT00530000063753.A.a ENSGT00530000063753.B.c ENSGT00440000038745.a.a.a Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 100 ENSGT00390000009916.c ENSGT00940000154990.fb.a.k.b ENSGT00940000158914.a ENSGT00940000156166.b.a.b.a ENSGT00940000153846.a.b ENSGT00940000154912.v.e.a ENSGT00940000165172.b.a ENSGT00440000033742.a.b.c.b ENSGT00390000016493 ENSGT00390000012364.b.c ENSGT00390000010581.a ENSGT00940000156498.g.b ENSGT00940000164538.d ENSGT00940000155641.g.b.e ENSGT00940000158838.b #20 ENSGT00730000111057.d.c #22 ENSGT00530000069385.d.a ENSGT00940000167317.c.a ENSGT00940000157195.n.e ENSGT00540000073890.r Huchen MODERN SPECIES 237 map2k7 (ENSHHUG00000039957) ENSHHUG00000039987 EVI5L (ENSHHUG00000040005) DDX39A (ENSHHUG00000040112) ENSHHUG00000040185 rab11fip4b (ENSHHUG00000040191) ENSHHUG00000040214 utp6 (ENSHHUG00000040223) suz12b (ENSHHUG00000040246) atad5b (ENSHHUG00000040340) tefm (ENSHHUG00000040355) ADAP2 (ENSHHUG00000040359) ENSHHUG00000040367 rhot1b (ENSHHUG00000040376) rhbdl3 (ENSHHUG00000040524) #20 ZNF207 (ENSHHUG00000040528) #22 ENSHHUG00000040552 ENSHHUG00000040563 Salmoninae_a ANCESTRAL SPECIES 82 ENSGT00940000154990.fb.a.k.b ENSGT00940000158914.a ENSGT00940000156166.b.a.b.a ENSGT00940000153846.a.b.c ENSGT00940000154912.v.e.a ENSGT00940000165172.b.a ENSGT00440000033742.a.b.c.b ENSGT00390000016493.k ENSGT00390000012364.b.d ENSGT00940000153469.a.a.l ENSGT00390000010581.b ENSGT00940000156498.g.b.d ENSGT00940000164538.d.c.a ENSGT00940000155641.g.b.e ENSGT00940000158838.b #20 ENSGT00730000111057.d.c #22 ENSGT00530000069385.d.a ENSGT00940000167317.c.a ENSGT00940000157195.n.e ENSGT00540000073890.r ENSGT00540000073890.q.b ENSGT00940000164904.a.g.a ENSGT00950000182895.a.a.a.b ENSGT00940000157333.a.j ENSGT00940000155738.k.a ENSGT00940000154272.B.a.f ENSGT00940000158772.a.a ENSGT00940000157016.e.b ENSGT00410000025739.c.b.i ENSGT00390000007779.f ENSGT00940000153882.a.b.a.a.b Salmo ANCESTRAL SPECIES 37 ENSGT00940000154990.fb.a.k.b ENSGT00940000158914.a ENSGT00940000156166.b.a.b.a ENSGT00940000153846.a.b.c ENSGT00940000154912.v.e.a ENSGT00940000165172.b.a ENSGT00440000033742.a.b.c.b ENSGT00390000016493.k ENSGT00390000012364.b.d ENSGT00940000153469.a.a.l ENSGT00390000010581.b ENSGT00940000156498.g.b.d ENSGT00940000164538.d.c.a ENSGT00940000155641.g.b.e ENSGT00940000158838.b #20 ENSGT00730000111057.d.c #22 ENSGT00530000069385.d.a ENSGT00940000167317.c.a ENSGT00940000157195.n.e ENSGT00540000073890.r ENSGT00940000157333.a.j ENSGT00940000155738.k.a ENSGT00940000154272.B.a.f ENSGT00940000158772.a.a ENSGT00940000157016.e.b ENSGT00410000025739.c.b.i ENSGT00390000007779.f ENSGT00940000153882.a.b.a.a.b ENSGT00530000063753.B.c.f ENSGT00530000063753.A.a.d ENSGT00440000038745.a.a.a.b River trout MODERN SPECIES 5 PKN1 (ENSSTUG00000013332) map2k7 (ENSSTUG00000014327) ENSSTUG00000014478 EVI5L (ENSSTUG00000014499) DDX39A (ENSSTUG00000014760) ENSSTUG00000014782 rab11fip4b (ENSSTUG00000014791) utp6 (ENSSTUG00000014887) suz12b (ENSSTUG00000015071) ENSSTUG00000015774 tefm (ENSSTUG00000015800) ADAP2 (ENSSTUG00000015811) ENSSTUG00000015847 rhot1b (ENSSTUG00000015885) rhbdl3 (ENSSTUG00000017111) #20 znf207b (ENSSTUG00000017156) #22 ENSSTUG00000017186 ENSSTUG00000017204 ENSSTUG00000017348 septin9b (ENSSTUG00000017371) ENSSTUG00000017684 ENSSTUG00000017695 jpt1a (ENSSTUG00000017706) ENSSTUG00000017725 ENSSTUG00000017730 gga3a (ENSSTUG00000017819) grb2a (ENSSTUG00000018218) MCHR1 (ENSSTUG00000018225) usp43a (ENSSTUG00000018230) CFAP52 (ENSSTUG00000018247) ENSSTUG00000018250 Atlantic salmon MODERN SPECIES 3 ENSSSAG00000004995 map2k7 (ENSSSAG00000004417) ENSSSAG00000098757 ENSSSAG00000076919 ENSSSAG00000076934 ENSSSAG00000113531 rab11fip4b (ENSSSAG00000076852) utp6 (ENSSSAG00000076822) suz12b (ENSSSAG00000005828) atad5b (ENSSSAG00000076659) tefm (ENSSSAG00000076655) ADAP2 (ENSSSAG00000076610) ENSSSAG00000007919 rhot1b (ENSSSAG00000076267) ENSSSAG00000083659 #20 ZNF207 (ENSSSAG00000076235) #22 ENSSSAG00000086258 ENSSSAG00000076210 ENSSSAG00000091574 septin9b (ENSSSAG00000076192) ENSSSAG00000076184 ENSSSAG00000110018 jpt1a (ENSSSAG00000076171) ENSSSAG00000065582 gga3a (ENSSSAG00000075472) grb2a (ENSSSAG00000111573) ENSSSAG00000075448 usp43a (ENSSSAG00000075430) cfap52 (ENSSSAG00000075420) ENSSSAG00000099580 stx8 (ENSSSAG00000075414) Oncorhynchus ANCESTRAL SPECIES 1 ENSGT00940000158914.a ENSGT01010000229885 ENSGT00940000156166.b.a.b.a ENSGT00940000153846.a.b.c ENSGT00940000154912.v.e.a ENSGT00940000165172.b.a ENSGT00440000033742.a.b.c.b ENSGT00390000016493.k ENSGT00390000012364.b.d ENSGT00940000153469.a.a.l ENSGT00390000010581.b ENSGT00940000156498.g.b.d ENSGT00940000164538.d.c.a ENSGT00940000155641.g.b.e ENSGT00940000158838.b #20 ENSGT00730000111057.d.c #22 ENSGT00940000167317.c.a ENSGT00940000157195.n.e ENSGT00540000073890.r ENSGT00540000073890.q.b ENSGT00940000164904.a.g.a ENSGT00950000182895.a.a.a.b ENSGT00940000157333.a.j ENSGT00940000155738.k.a ENSGT00940000154272.B.a.f ENSGT00940000158772.a.a ENSGT00940000157016.e.b ENSGT00410000025739.c.b.i ENSGT00390000007779.f ENSGT00940000153882.a.b.a.a.b ENSGT00530000063753.B.c.f Rainbow trout MODERN SPECIES 8 map2k7 (ENSOMYG00000005818) ENSOMYG00000070447 ENSOMYG00000005658 ENSOMYG00000005540 ENSOMYG00000046318 ENSOMYG00000046307 rab11fip4b (ENSOMYG00000046257) utp6 (ENSOMYG00000046210) suz12b (ENSOMYG00000046196) atad5b (ENSOMYG00000046186) tefm (ENSOMYG00000046177) ADAP2 (ENSOMYG00000046156) ENSOMYG00000046150 rhot1b (ENSOMYG00000046138) ENSOMYG00000046132 #20 ZNF207 (ENSOMYG00000046126) #22 ENSOMYG00000046088 septin9b (ENSOMYG00000059396) ENSOMYG00000046050 ENSOMYG00000057320 ENSOMYG00000061204 hn1 (ENSOMYG00000046035) ENSOMYG00000046027 gga3a (ENSOMYG00000045917) grb2a (ENSOMYG00000045892) ENSOMYG00000076222 usp43a (ENSOMYG00000045885) cfap52 (ENSOMYG00000045879) ENSOMYG00000045873 stx8 (ENSOMYG00000045864) ntn1a (ENSOMYG00000045858) Oncorhynchus_a ANCESTRAL SPECIES 51 ENSGT00940000158914.a ENSGT01010000229885 ENSGT00940000156166.b.a.b.a ENSGT00940000153846.a.b.c ENSGT00940000154912.v.e.a ENSGT00940000165172.b.a ENSGT00440000033742.a.b.c.b ENSGT00390000016493.k ENSGT00390000012364.b.d ENSGT00940000153469.a.a.l ENSGT00390000010581.b ENSGT00940000156498.g.b.d ENSGT00940000164538.d.c.a ENSGT00940000155641.g.b.e ENSGT00940000158838.b #20 ENSGT00730000111057.d.c #22 ENSGT00940000167317.c.a ENSGT00940000157195.n.e ENSGT00540000073890.r ENSGT00540000073890.q.b ENSGT00940000164904.a.g.a ENSGT00950000182895.a.a.a.b ENSGT00940000157333.a.j ENSGT00940000155738.k.a ENSGT00940000154272.B.a.f ENSGT00940000158772.a.a ENSGT00940000157016.e.b ENSGT00410000025739.c.b.i ENSGT00390000007779.f ENSGT00940000153882.a.b.a.a.b ENSGT00530000063753.B.c.f Chinook salmon MODERN SPECIES 11 SMARCE1 (ENSOTSG00005026946) ccr7 (ENSOTSG00005026943) TNS4 (ENSOTSG00005026939) ENSOTSG00005026936 krt15 (ENSOTSG00005026935) krt99 (ENSOTSG00005026927) ENSOTSG00005026913 rab11fip4b (ENSOTSG00005026912) utp6 (ENSOTSG00005025176) ENSOTSG00005025172 tefm (ENSOTSG00005025171) ADAP2 (ENSOTSG00005025170) ENSOTSG00005025168 rhot1b (ENSOTSG00005024714) rhbdl3 (ENSOTSG00005024713) #20 znf207b (ENSOTSG00005024711) #22 ENSOTSG00005024710 septin9b (ENSOTSG00005024686) ENSOTSG00005024678 ENSOTSG00005024677 ENSOTSG00005024676 jpt1a (ENSOTSG00005024675) ENSOTSG00005024659 gga3a (ENSOTSG00005023547) grb2a (ENSOTSG00005023545) MCHR1 (ENSOTSG00005023543) usp43a (ENSOTSG00005023541) cfap52 (ENSOTSG00005023540) ENSOTSG00005023539 ENSOTSG00005023538 stx8 (ENSOTSG00005023536) Coho salmon MODERN SPECIES ENSOKIG00005001558 EVI5L (ENSOKIG00005001624) DDX39A (ENSOKIG00005001783) ENSOKIG00005001794 rab11fip4b (ENSOKIG00005001816) utp6 (ENSOKIG00005002053) suz12b (ENSOKIG00005002646) ENSOKIG00005002751 tefm (ENSOKIG00005002774) ADAP2 (ENSOKIG00005002786) ENSOKIG00005002809 ENSOKIG00005002813 ENSOKIG00005002816 rhot1b (ENSOKIG00005002821) rhbdl3 (ENSOKIG00005002846) #20 znf207b (ENSOKIG00005002881) #22 ENSOKIG00005002907 ENSOKIG00005002930 septin9b (ENSOKIG00005003011) ENSOKIG00005003213 ENSOKIG00005003219 ENSOKIG00005003224 jpt1a (ENSOKIG00005003233) ENSOKIG00005003250 gga3a (ENSOKIG00005003304) grb2a (ENSOKIG00005003445) MCHR1 (ENSOKIG00005003456) usp43a (ENSOKIG00005003464) cfap52 (ENSOKIG00005003492) ENSOKIG00005003543 stx8 (ENSOKIG00005003553) Salmoninae ANCESTRAL SPECIES 798 ENSGT00390000012364.b.d ENSGT00940000153469.a.a.l ENSGT00390000010581.b ENSGT01030000234583.a.b.b.f.g ENSGT00940000155641.g.b.f ENSGT00940000158838.a #20 ENSGT00730000111057.d.d #22 ENSGT00530000069385.d.b ENSGT00940000167317.c.b Salmoninae_a ANCESTRAL SPECIES 33 ENSGT00390000017614.e.a.a.b.a ENSGT00390000017614.e.a.b ENSGT00940000156166.b.a.b.b ENSGT00940000153846.a.b.d ENSGT00940000154912.v.f ENSGT00940000154912.v.e.b ENSGT00940000165172.b.b ENSGT00440000033742.a.b.c.a ENSGT00390000016493.l ENSGT00390000012364.b.c ENSGT00390000010581.a ENSGT00940000156498.g.b.c ENSGT00940000164538.d.c.b ENSGT00940000155641.g.b.f ENSGT00940000158838.a #20 ENSGT00730000111057.d.d #22 ENSGT00530000069385.d.b ENSGT00940000167317.c.b ENSGT00940000157195.n.f ENSGT00540000073890.q.a ENSGT00940000164904.a.g.b.a ENSGT00950000182895.b.b.g.a ENSGT00940000157333.a.i ENSGT00940000155738.k.b.b ENSGT00940000154272.B.a.e ENSGT00940000158772.a.b ENSGT00940000157016.e.a ENSGT00410000025739.c.b.j ENSGT00390000007779.e ENSGT00940000153882.a.b.a.a.a ENSGT00530000063753.B.c.e Oncorhynchus ANCESTRAL SPECIES 42 ENSGT00970000193754.b.b.a ENSGT00940000156166.b.a.b.b ENSGT00940000153846.a.b.d ENSGT00940000154912.v.f ENSGT00940000154912.v.e.b.b ENSGT00940000154912.v.e.b.a ENSGT00940000165172.b.b ENSGT00440000033742.a.b.c.a ENSGT00390000016493.l ENSGT00390000012364.b.c ENSGT00390000010581.a ENSGT00940000156498.g.b.c ENSGT00940000164538.d.c.b ENSGT00940000155641.g.b.f ENSGT00940000158838.a #20 ENSGT00730000111057.d.d #22 ENSGT00530000069385.d.b ENSGT00940000167317.c.b ENSGT00940000157195.n.f ENSGT00950000182895.b.b.g.b ENSGT00940000157333.a.i ENSGT00940000155738.k.b.b ENSGT00940000154272.B.a.e ENSGT00940000158772.a.b ENSGT00940000157016.e.a ENSGT00410000025739.c.b.j ENSGT00390000007779.e ENSGT00940000153882.a.b.a.a.a ENSGT00530000063753.B.c.e ENSGT00530000063753.A.a.c ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.a.b.a.b Rainbow trout MODERN SPECIES 4 ENSOMYG00000061423 ENSOMYG00000058938 ENSOMYG00000070546 ENSOMYG00000062226 ENSOMYG00000034940 ENSOMYG00000034929 ENSOMYG00000070820 rab11fip4b (ENSOMYG00000034763) UTP6 (ENSOMYG00000034695) suz12b (ENSOMYG00000033992) ENSOMYG00000033915 ENSOMYG00000033855 ENSOMYG00000033836 RHOT1 (ENSOMYG00000033674) RHBDL3 (ENSOMYG00000033613) #20 ZNF207 (ENSOMYG00000033597) #22 ENSOMYG00000033571 septin9b (ENSOMYG00000033470) ENSOMYG00000073365 ENSOMYG00000033402 ENSOMYG00000063424 ENSOMYG00000057355 ENSOMYG00000073204 jpt1a (ENSOMYG00000033366) ENSOMYG00000033336 ENSOMYG00000033297 ENSOMYG00000065094 grb2a (ENSOMYG00000033239) ENSOMYG00000060989 usp43a (ENSOMYG00000073454) cfap52 (ENSOMYG00000033189) Oncorhynchus_a ANCESTRAL SPECIES 38 ENSGT00970000193754.b.b.a ENSGT00940000156166.b.a.b.b ENSGT00940000153846.a.b.d ENSGT00940000154912.v.f ENSGT00940000154912.v.e.b.b ENSGT00940000154912.v.e.b.a ENSGT00940000165172.b.b ENSGT00440000033742.a.b.c.a ENSGT00390000016493.l ENSGT00390000012364.b.c ENSGT00390000010581.a ENSGT00940000156498.g.b.c ENSGT00940000164538.d.c.b ENSGT00940000155641.g.b.f ENSGT00940000158838.a #20 ENSGT00730000111057.d.d #22 ENSGT00530000069385.d.b ENSGT00940000167317.c.b ENSGT00940000157195.n.f ENSGT00540000073890.q.a ENSGT00940000164904.a.g.b.a ENSGT00950000182895.b.b.g.b ENSGT00940000157333.a.i ENSGT00940000155738.k.b.b ENSGT00940000154272.B.a.e ENSGT00940000158772.a.b ENSGT00940000157016.e.a ENSGT00410000025739.c.b.j ENSGT00390000007779.e ENSGT00940000153882.a.b.a.a.a ENSGT00530000063753.B.c.e Chinook salmon MODERN SPECIES 25 ENSOTSG00005025900 MGAT5B (ENSOTSG00005025865) ENSOTSG00005025862 SEC14L1 (ENSOTSG00005024470) NPTX1 (ENSOTSG00005024452) DDX39A (ENSOTSG00005024361) ENSOTSG00005024360 rab11fip4b (ENSOTSG00005023910) utp6 (ENSOTSG00005023247) suz12b (ENSOTSG00005022615) tefm (ENSOTSG00005022611) ENSOTSG00005022608 ENSOTSG00005022607 rhot1b (ENSOTSG00005022460) rhbdl3 (ENSOTSG00005022445) #20 ZNF207 (ENSOTSG00005022440) #22 ENSOTSG00005022437 ENSOTSG00005022399 ENSOTSG00005022395 ENSOTSG00005022392 jpt1a (ENSOTSG00005022390) ENSOTSG00005022388 gga3a (ENSOTSG00005019737) grb2a (ENSOTSG00005019729) MCHR1 (ENSOTSG00005019726) cfap52 (ENSOTSG00005019690) ENSOTSG00005019665 stx8 (ENSOTSG00005019663) ntn1a (ENSOTSG00005019662) PIK3R5 (ENSOTSG00005019661) PIK3R6 (ENSOTSG00005019660) Coho salmon MODERN SPECIES 12 ENSOKIG00005023123 ENSOKIG00005023134 EVI5L (ENSOKIG00005023215) ENSOKIG00005023753 DDX39A (ENSOKIG00005023763) DDX39A (ENSOKIG00005023816) ENSOKIG00005024008 rab11fip4b (ENSOKIG00005024044) utp6 (ENSOKIG00005024294) suz12b (ENSOKIG00005024636) ENSOKIG00005026012 ENSOKIG00005026039 ENSOKIG00005026109 rhot1b (ENSOKIG00005026137) RHBDL3 (ENSOKIG00005026227) #20 ZNF207 (ENSOKIG00005026294) #22 ENSOKIG00005026314 ENSOKIG00005026362 septin9b (ENSOKIG00005026810) ENSOKIG00005026953 ENSOKIG00005026973 jpt1a (ENSOKIG00005027011) ENSOKIG00005027035 gga3a (ENSOKIG00005027117) grb2a (ENSOKIG00005027274) MCHR1 (ENSOKIG00005027295) usp43a (ENSOKIG00005027337) cfap52 (ENSOKIG00005027364) ENSOKIG00005027424 stx8 (ENSOKIG00005027436) ntn1a (ENSOKIG00005027470) Salmo ANCESTRAL SPECIES 89 ENSGT00390000017614.e.a.a.b.b ENSGT00390000017614.e.a.a.b.a ENSGT00390000017614.e.a.b ENSGT00940000156166.b.a.b.b ENSGT00940000153846.a.b.d ENSGT00940000154912.v.e.b ENSGT00940000165172.b.b ENSGT00440000033742.a.b.c.a ENSGT00390000016493.l ENSGT00390000012364.b.c ENSGT00390000010581.a ENSGT00940000156498.g.b.c ENSGT01030000234583.a.b.b.f.g ENSGT00940000155641.g.b.f ENSGT00940000158838.a #20 ENSGT00730000111057.d.d #22 ENSGT00530000069385.d.b ENSGT00940000167317.c.b ENSGT00940000157195.n.f River trout MODERN SPECIES 31 map2k7 (ENSSTUG00000049495) ENSSTUG00000049480 ENSSTUG00000049475 ENSSTUG00000049468 ENSSTUG00000049464 EVI5L (ENSSTUG00000049150) DDX39A (ENSSTUG00000049071) ENSSTUG00000049061 rab11fip4b (ENSSTUG00000049020) utp6 (ENSSTUG00000048980) suz12b (ENSSTUG00000048514) tefm (ENSSTUG00000048438) ENSSTUG00000048379 ENSSTUG00000048355 rhot1b (ENSSTUG00000047225) ZNF207 (ENSSTUG00000047149) #22 ENSSTUG00000047145 ENSSTUG00000046904 septin9b (ENSSTUG00000046786) ENSSTUG00000046769 ENSSTUG00000046764 jpt1a (ENSSTUG00000046757) ENSSTUG00000046706 gga3a (ENSSTUG00000046624) grb2a (ENSSTUG00000046592) usp43a (ENSSTUG00000046569) CFAP52 (ENSSTUG00000046531) ENSSTUG00000046518 stx8 (ENSSTUG00000046505) ntn1a (ENSSTUG00000046413) PIK3R5 (ENSSTUG00000046374) Atlantic salmon MODERN SPECIES 11 ENSSSAG00000004204 ENSSSAG00000086217 ENSSSAG00000096802 ENSSSAG00000121195 ENSSSAG00000004386 DDX39 (ENSSSAG00000005515) rab11fip4b (ENSSSAG00000005542) ENSSSAG00000112250 utp6 (ENSSSAG00000005694) suz12b (ENSSSAG00000076684) ENSSSAG00000082437 ENSSSAG00000007440 ENSSSAG00000007443 rhot1b (ENSSSAG00000008086) ENSSSAG00000038485 #20 ZNF207 (ENSSSAG00000039149) #22 ENSSSAG00000107216 ENSSSAG00000039279 septin9b (ENSSSAG00000039862) ENSSSAG00000040178 ENSSSAG00000040190 jpt1a (ENSSSAG00000040229) ENSSSAG00000040371 gga3a (ENSSSAG00000040514) grb2a (ENSSSAG00000075450) usp43a (ENSSSAG00000043111) cfap52 (ENSSSAG00000043131) ENSSSAG00000089113 stx8 (ENSSSAG00000043546) ntn1a (ENSSSAG00000043567) PIK3R5 (ENSSSAG00000043796) Huchen MODERN SPECIES 2588 rhbdl3 (ENSHHUG00000007284) #20 znf207b (ENSHHUG00000007292) #22 ENSHHUG00000007324 ENSHHUG00000007330 Northern pike MODERN SPECIES 8 ADAP2 (ENSELUG00000006554) tefm (ENSELUG00000006522) atad5b (ENSELUG00000029348) suz12b (ENSELUG00000006584) utp6 (ENSELUG00000006618) rab11fip4b (ENSELUG00000006705) ENSELUG00000006729 DDX39A (ENSELUG00000006779) EVI5L (ENSELUG00000006910) ENSELUG00000030302 ENSELUG00000006948 ENSELUG00000032480 ENSELUG00000028132 rhot1b (ENSELUG00000000243) rhbdl3 (ENSELUG00000007113) #20 znf207b (ENSELUG00000007167) #22 ENSELUG00000007206 septin9b (ENSELUG00000007255) ENSELUG00000030348 SMURF2 (ENSELUG00000007365) CEP95 (ENSELUG00000007540) DDX5 (ENSELUG00000007424) POLG2 (ENSELUG00000007591) srp68 (ENSELUG00000007653) evpla (ENSELUG00000007680) ENSELUG00000007704 acox1 (ENSELUG00000007744) RHBDF2 (ENSELUG00000007849) aanat (ENSELUG00000007915) UBE2O (ENSELUG00000007975) SPHK1 (ENSELUG00000008009) Spotted gar MODERN SPECIES 648 ENSLOCG00000013830 scpep1 (ENSLOCG00000013821) coil (ENSLOCG00000013816) rab11fip4b (ENSLOCG00000013807) ENSLOCG00000017765 utp6 (ENSLOCG00000013797) suz12b (ENSLOCG00000013792) crlf3 (ENSLOCG00000013787) ATAD5 (ENSLOCG00000013779) tefm (ENSLOCG00000013775) ADAP2 (ENSLOCG00000013764) ENSLOCG00000013762 rhot1a (ENSLOCG00000013741) rhbdl3 (ENSLOCG00000013739) #20 zgc:153240 (ENSLOCG00000013733) #21 znf207a (ENSLOCG00000013726) #22 ENSLOCG00000013721 ENSLOCG00000017764 ERN1 (ENSLOCG00000013703) tex2 (ENSLOCG00000013688) ENSLOCG00000017763 axin2 (ENSLOCG00000013680) cep112 (ENSLOCG00000013670) APOH (ENSLOCG00000013660) prkcaa (ENSLOCG00000013639) cacng5a (ENSLOCG00000013635) cacng4b (ENSLOCG00000013633) cacng1a (ENSLOCG00000013628) helz (ENSLOCG00000013617) psmd12 (ENSLOCG00000013614) ENSLOCG00000013604 Reedfish MODERN SPECIES 5 trim25 (ENSECRG00000015761) scpep1 (ENSECRG00000015803) ENSECRG00000015863 rab11fip4b (ENSECRG00000015905) ENSECRG00000015946 utp6 (ENSECRG00000015980) suz12b (ENSECRG00000016122) crlf3 (ENSECRG00000016233) ENSECRG00000016282 ENSECRG00000016312 tefm (ENSECRG00000016358) ADAP2 (ENSECRG00000016392) rhot1a (ENSECRG00000016576) rhbdl3 (ENSECRG00000016839) #20 ENSECRG00000016894 #21 znf207a (ENSECRG00000016932) #22 ENSECRG00000016980 ENSECRG00000016995 ENSECRG00000017015 ENSECRG00000017032 BPTF (ENSECRG00000017064) ENSECRG00000017105 NOL11 (ENSECRG00000017154) PITPNC1 (ENSECRG00000017200) psmd12 (ENSECRG00000017259) helz (ENSECRG00000017333) cacng1a (ENSECRG00000017404) cacng4b (ENSECRG00000017428) cacng5a (ENSECRG00000017483) prkcaa (ENSECRG00000017536) APOH (ENSECRG00000017603)