Euarchontoglires_A ANCESTRAL SPECIES 9 ENSGT00940000162335 ENSGT00940000162895 ENSGT00940000159753 ENSGT00940000154589.b ENSGT00390000002219 ENSGT00940000154340.A ENSGT00940000162789 ENSGT00940000156946 ENSGT01050000244965.b #15 ENSGT00940000158366 ENSGT00940000156627 #17 ENSGT01100000263524.I ENSGT00730000111223 #18 ENSGT00930000151042 #19 ENSGT00390000008798.c #21 ENSGT00940000155140 #22 ENSGT00940000158059 #23 ENSGT00950000182924.B.a.a #24 ENSGT00940000159823 #25 ENSGT00940000157910 #26 ENSGT00390000001376 #27 ENSGT00390000008294.f ##28 ENSGT00390000008294.e.b.a.a #28 ENSGT00940000159660 #29 ENSGT00940000159984 #30 ENSGT00940000157714 #31 ENSGT00940000157370 #32 ENSGT00390000009613.b ENSGT00940000162188 ENSGT00530000069080 ENSGT00940000154950 Glires ANCESTRAL SPECIES 8 ENSGT00940000162335 ENSGT00940000162895 ENSGT00940000159753 ENSGT00940000154589.b ENSGT00390000002219 ENSGT00940000154340.A ENSGT00940000162789 ENSGT00940000156946 ENSGT01050000244965.b #15 ENSGT00940000158366 ENSGT00940000156627 #17 ENSGT01100000263524.I ENSGT00730000111223 #18 ENSGT00930000151042 #19 ENSGT00390000008798.c #21 ENSGT00940000155140 #22 ENSGT00940000158059 #23 ENSGT00950000182924.B.a.a #24 ENSGT00940000159823 #25 ENSGT00940000157910 #26 ENSGT00390000001376 #27 ENSGT00390000008294.f ##28 ENSGT00390000008294.e.b.a.a #28 ENSGT00940000159660 #29 ENSGT00940000159984 #30 ENSGT00940000157714 #31 ENSGT00940000157370 #32 ENSGT00390000009613.b ENSGT00940000162188 ENSGT00530000069080 ENSGT00940000154950 Rodentia ANCESTRAL SPECIES 13 ENSGT00940000162335 ENSGT00940000162895 ENSGT00940000159753 ENSGT00940000154589.b ENSGT00390000002219 ENSGT00940000154340.A ENSGT00940000162789 ENSGT00940000156946 ENSGT01050000244965.b #15 ENSGT00940000158366 ENSGT00940000156627 #17 ENSGT01100000263524.I ENSGT00730000111223 #18 ENSGT00930000151042 #19 ENSGT00390000008798.c #21 ENSGT00940000155140 #22 ENSGT00940000158059 #23 ENSGT00950000182924.B.a.a #24 ENSGT00940000159823 #25 ENSGT00940000157910 #26 ENSGT00390000001376 #27 ENSGT00390000008294.e.b.a.b ##28 ENSGT00390000008294.e.b.a.a #28 ENSGT00940000159660 #29 ENSGT00940000159984 #30 ENSGT00940000157714 #31 ENSGT00940000157370 #32 ENSGT00390000009613.b ENSGT00940000162188 ENSGT00530000069080 ENSGT00940000154950 Rodentia_B ANCESTRAL SPECIES 30 ENSGT00940000162335 ENSGT00940000162895 ENSGT00940000159753 ENSGT00940000154589.b ENSGT00390000002219 ENSGT00940000154340.A ENSGT00940000162789 ENSGT00940000156946 ENSGT01050000244965.b #15 ENSGT00940000158366 ENSGT00940000156627 #17 ENSGT01100000263524.I ENSGT00730000111223 #18 ENSGT00930000151042 #19 ENSGT00390000008798.c #21 ENSGT00940000155140 #22 ENSGT00940000158059 #23 ENSGT00950000182924.B.a.a #24 ENSGT00940000159823 #25 ENSGT00940000157910 #26 ENSGT00390000001376 #27 ENSGT00390000008294.e.b.a.b ##28 ENSGT00390000008294.e.b.a.a #28 ENSGT00940000159660 #29 ENSGT00940000159984 #30 ENSGT00940000157714 #31 ENSGT00940000157370 #32 ENSGT00390000009613.b ENSGT00940000162188 ENSGT00530000069080 ENSGT00940000154950 Myomorpha ANCESTRAL SPECIES 42 ENSGT00940000162335 ENSGT00940000162895 ENSGT00940000159753 ENSGT00940000154589.b ENSGT00390000002219 ENSGT00940000154340.A ENSGT00940000162789 ENSGT00940000156946 ENSGT01050000244965.b #15 ENSGT00940000158366 ENSGT00940000156627 #17 ENSGT01100000263524.I ENSGT00730000111223 #18 ENSGT00930000151042 #19 ENSGT00390000008798.c #21 ENSGT00940000155140 #22 ENSGT00940000158059 #23 ENSGT00950000182924.B.a.a #24 ENSGT00940000159823 #25 ENSGT00940000157910 #26 ENSGT00390000001376 #27 ENSGT00390000008294.e.b.a.b ##28 ENSGT00390000008294.e.b.a.a #28 ENSGT00940000159660 #29 ENSGT00940000159984 #30 ENSGT00940000157714 #31 ENSGT00940000157370 #32 ENSGT00390000009613.b ENSGT00940000162188 ENSGT00530000069080 ENSGT00940000154950 Muroidea ANCESTRAL SPECIES 53 ENSGT00940000162335 ENSGT00940000162895 ENSGT00940000159753 ENSGT00940000154589.b ENSGT00390000002219 ENSGT00940000154340.A ENSGT00940000162789 ENSGT00940000156946 ENSGT01050000244965.b #15 ENSGT00940000158366 ENSGT00940000156627 #17 ENSGT01100000263524.I ENSGT00730000111223 #18 ENSGT00930000151042 #19 ENSGT00390000008798.c #21 ENSGT00940000155140 #22 ENSGT00940000158059 #23 ENSGT00950000182924.B.a.a #24 ENSGT00940000159823 #25 ENSGT00940000157910 #26 ENSGT00390000001376 #27 ENSGT00390000008294.e.b.a.b ##28 ENSGT00390000008294.e.b.a.a #28 ENSGT00940000159660 #29 ENSGT00940000159984 #30 ENSGT00940000157714 #31 ENSGT00940000157370 #32 ENSGT00390000009613.b ENSGT00940000162188 ENSGT00530000069080 ENSGT00940000154950 Upper Galilee mountains blind mole rat MODERN SPECIES 465 ENSNGAG00000019288 #14 Elovl6 (ENSNGAG00000023846) #15 ENSNGAG00000024138 #16 Lrit3 (ENSNGAG00000002073) #17 Gar1 (ENSNGAG00000008268) #18 Cfi (ENSNGAG00000012073) #19 ENSNGAG00000019057 #20 Pla2g12a (ENSNGAG00000019864) #21 Casp6 (ENSNGAG00000021834) #22 Mcub (ENSNGAG00000022593) #23 Sec24b (ENSNGAG00000023895) #24 Col25a1 (ENSNGAG00000001308) #25 Etnppl (ENSNGAG00000019931) #26 Ostc (ENSNGAG00000004125) #27 ENSNGAG00000021739 #28 Lef1 (ENSNGAG00000022789) #29 Hadh (ENSNGAG00000023972) #30 Cyp2u1 (ENSNGAG00000024149) #31 Sgms2 (ENSNGAG00000000978) #32 Muroidea_A ANCESTRAL SPECIES 5 ENSGT00940000162335 ENSGT00940000162895 ENSGT00940000159753 ENSGT00940000154589.b ENSGT00390000002219 ENSGT00940000154340.A ENSGT00940000162789 ENSGT00940000156946 ENSGT01050000244965.b #15 ENSGT00940000158366 ENSGT00940000156627 #17 ENSGT01100000263524.I ENSGT00730000111223 #18 ENSGT00930000151042 #19 ENSGT00390000008798.c #21 ENSGT00940000155140 #22 ENSGT00940000158059 #23 ENSGT00950000182924.B.a.a #24 ENSGT00940000159823 #25 ENSGT00940000157910 #26 ENSGT00390000001376 #27 ENSGT00390000008294.e.b.a.b ##28 ENSGT00940000159660 #29 ENSGT00940000159984 #30 ENSGT00940000157714 #31 ENSGT00940000157370 #32 ENSGT00390000009613.b ENSGT00940000162188 ENSGT00530000069080 ENSGT00940000154950 ENSGT00940000158244 Cricetidae ANCESTRAL SPECIES 6 ENSGT00940000162335 ENSGT00940000162895 ENSGT00940000159753 ENSGT00940000154589.b ENSGT00390000002219 ENSGT00940000154340.A ENSGT00940000162789 ENSGT00940000156946 ENSGT01050000244965.b #15 ENSGT00940000158366 ENSGT00940000156627 #17 ENSGT01100000263524.I ENSGT00730000111223 #18 ENSGT00930000151042 #19 ENSGT00390000008798.c #21 ENSGT00940000155140 #22 ENSGT00940000158059 #23 ENSGT00950000182924.B.a.a #24 ENSGT00940000159823 #25 ENSGT00940000157910 #26 ENSGT00390000001376 #27 ENSGT00390000008294.e.b.a.a #28 ENSGT00940000159660 #29 ENSGT00940000159984 #30 ENSGT00940000157714 #31 ENSGT00940000157370 #32 ENSGT00390000009613.b ENSGT00940000162188 ENSGT00530000069080 ENSGT00940000154950 ENSGT00940000158244 Cricetinae ANCESTRAL SPECIES 12 ENSGT00940000162642 ENSGT00940000162335 ENSGT00940000162895 ENSGT00940000159753 ENSGT00940000154589.b ENSGT00390000002219 ENSGT00940000162789 ENSGT00940000156946 ENSGT01050000244965.b #15 ENSGT00940000158366 ENSGT00940000156627 #17 ENSGT01100000263524.I ENSGT00730000111223 #18 ENSGT00930000151042 #19 ENSGT00390000008798.c #21 ENSGT00940000155140 #22 ENSGT00940000158059 #23 ENSGT00950000182924.B.a.a #24 ENSGT00940000159823 #25 ENSGT00940000157910 #26 ENSGT00390000001376 #27 ENSGT00390000008294.e.b.a.a #28 ENSGT00940000159660 #29 ENSGT00940000159984 #30 ENSGT00940000157714 #31 ENSGT00940000157370 #32 ENSGT00390000009613.b ENSGT00940000162188 ENSGT00530000069080 ENSGT00940000154950 ENSGT00940000158244 Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 66 Zgrf1 (ENSCGRG00001021317) Alpk1 (ENSCGRG00001007859) Tifa (ENSCGRG00001002217) Ap1ar (ENSCGRG00001002312) ENSCGRG00001000195 Fam241a (ENSCGRG00001015267) Pitx2 (ENSCGRG00001020811) Enpep (ENSCGRG00001007343) ELOVL6 (ENSCGRG00001016844) #15 Egf (ENSCGRG00001015336) Lrit3 (ENSCGRG00001024786) #17 Rrh (ENSCGRG00001022555) Gar1 (ENSCGRG00001003919) #18 Cfi (ENSCGRG00001008062) #19 Pla2g12a (ENSCGRG00001020911) #21 ENSCGRG00001021697 #22 Mcub (ENSCGRG00001013554) #23 Sec24b (ENSCGRG00001011377) #24 Col25a1 (ENSCGRG00001016091) #25 Etnppl (ENSCGRG00001001866) #26 ENSCGRG00001012885 #27 Rpl34 (ENSCGRG00001011923) ##28 Lef1 (ENSCGRG00001022697) #29 Hadh (ENSCGRG00001022551) #30 Cyp2u1 (ENSCGRG00001000440) #31 Sgms2 (ENSCGRG00001022561) #32 Papss1 (ENSCGRG00001022641) Dkk2 (ENSCGRG00001015913) Gimd1 (ENSCGRG00001011642) Aimp1 (ENSCGRG00001012622) Tbck (ENSCGRG00001014137) Chinese hamster chok1gshd MODERN SPECIES 1 Adgra2 (ENSCGRG00001017775) Brf2 (ENSCGRG00001016656) ENSCGRG00001009456 Got1l1 (ENSCGRG00001008254) Adrb3 (ENSCGRG00001013361) Eif4ebp1 (ENSCGRG00001012311) Chrnb3 (ENSCGRG00001024861) Chrna6 (ENSCGRG00001024796) ENSCGRG00001024660 Unc5d (ENSCGRG00001016022) Dusp26 (ENSCGRG00001016001) Rnf122 (ENSCGRG00001015247) Tti2 (ENSCGRG00001014541) Mak16 (ENSCGRG00001016542) Fut10 (ENSCGRG00001014936) ENSCGRG00001014339 #22 Nrg1 (ENSCGRG00001024689) ENSCGRG00001022694 Wrn (ENSCGRG00001016491) Purg (ENSCGRG00001015485) Tex15 (ENSCGRG00001014732) Ppp2cb (ENSCGRG00001024500) Ubxn8 (ENSCGRG00001024281) Gsr (ENSCGRG00001023740) Smim18 (ENSCGRG00001006260) Gtf2e2 (ENSCGRG00001004129) Rbpms (ENSCGRG00001002814) Dctn6 (ENSCGRG00001001182) Mboat4 (ENSCGRG00001015723) Leprotl1 (ENSCGRG00001000543) Saraf (ENSCGRG00001024847) Golden Hamster MODERN SPECIES 754 Neurog2 (ENSMAUG00000004901) Alpk1 (ENSMAUG00000013220) Tifa (ENSMAUG00000007473) Fam241a (ENSMAUG00000019220) ENSMAUG00000002975 ENSMAUG00000006513 ENSMAUG00000000316 Enpep (ENSMAUG00000002734) ENSMAUG00000019195 ENSMAUG00000015497 Lrit3 (ENSMAUG00000015406) #17 Rrh (ENSMAUG00000016461) Gar1 (ENSMAUG00000016788) #18 Cfi (ENSMAUG00000020863) #19 Pla2g12a (ENSMAUG00000019760) #21 Casp6 (ENSMAUG00000012070) #22 Mcub (ENSMAUG00000002957) #23 Sec24b (ENSMAUG00000017584) #24 Col25a1 (ENSMAUG00000011716) #25 Etnppl (ENSMAUG00000014103) #26 Ostc (ENSMAUG00000017087) #27 ENSMAUG00000014918 #28 ENSMAUG00000002715 Lef1 (ENSMAUG00000005718) #29 Hadh (ENSMAUG00000015697) #30 Cyp2u1 (ENSMAUG00000015035) #31 Sgms2 (ENSMAUG00000010473) #32 Papss1 (ENSMAUG00000014765) Cricetidae_B ANCESTRAL SPECIES 3 ENSGT00940000162335 ENSGT00940000162895 ENSGT00940000159753 ENSGT00940000154589.b ENSGT00390000002219 ENSGT00940000154340.A ENSGT00940000162789 ENSGT00940000156946 ENSGT01050000244965.b #15 ENSGT00940000158366 ENSGT00940000156627 #17 ENSGT01100000263524.I ENSGT00730000111223 #18 ENSGT00930000151042 #19 ENSGT00390000008798.c #21 ENSGT00940000155140 #22 ENSGT00940000158059 #23 ENSGT00950000182924.B.a.a #24 ENSGT00940000159823 #25 ENSGT00940000157910 #26 ENSGT00390000001376 #27 ENSGT00390000008294.e.b.a.a #28 ENSGT00940000159660 #29 ENSGT00940000159984 #30 ENSGT00940000157714 #31 ENSGT00940000157370 #32 ENSGT00390000009613.b ENSGT00940000162188 ENSGT00530000069080 ENSGT00940000154950 ENSGT00940000158244 Prairie vole MODERN SPECIES 8 ENSMOCG00000016693 Neurog2 (ENSMOCG00000001166) Alpk1 (ENSMOCG00000019085) Tifa (ENSMOCG00000004620) ENSMOCG00000012032 Fam241a (ENSMOCG00000012965) ENSMOCG00000000185 Enpep (ENSMOCG00000015521) Elovl6 (ENSMOCG00000001659) #15 ENSMOCG00000006880 Lrit3 (ENSMOCG00000012841) #17 Rrh (ENSMOCG00000014201) Gar1 (ENSMOCG00000001340) #18 Cfi (ENSMOCG00000013835) #19 Pla2g12a (ENSMOCG00000000301) #21 Casp6 (ENSMOCG00000019140) #22 Mcub (ENSMOCG00000001391) #23 Sec24b (ENSMOCG00000010749) #24 Col25a1 (ENSMOCG00000005127) #25 Etnppl (ENSMOCG00000013627) #26 Ostc (ENSMOCG00000003130) #27 ENSMOCG00000012371 #28 Lef1 (ENSMOCG00000017897) #29 Hadh (ENSMOCG00000002166) #30 Cyp2u1 (ENSMOCG00000012427) #31 Sgms2 (ENSMOCG00000008205) #32 Papss1 (ENSMOCG00000012328) ENSMOCG00000013454 Dkk2 (ENSMOCG00000016432) Gimd1 (ENSMOCG00000017308) ENSMOCG00000001103 Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES 19 ENSPEMG00000008182 Neurog2 (ENSPEMG00000027945) Alpk1 (ENSPEMG00000004361) Tifa (ENSPEMG00000024630) Ap1ar (ENSPEMG00000025779) ENSPEMG00000026286 Pitx2 (ENSPEMG00000026986) Enpep (ENSPEMG00000012340) Elovl6 (ENSPEMG00000030330) #15 Egf (ENSPEMG00000016237) Lrit3 (ENSPEMG00000008291) #17 Rrh (ENSPEMG00000008715) Gar1 (ENSPEMG00000015838) #18 Cfi (ENSPEMG00000017557) #19 Pla2g12a (ENSPEMG00000014433) #21 ENSPEMG00000011964 #22 Mcub (ENSPEMG00000008411) #23 Sec24b (ENSPEMG00000016956) #24 Col25a1 (ENSPEMG00000000474) #25 Etnppl (ENSPEMG00000009696) #26 Ostc (ENSPEMG00000001349) #27 ENSPEMG00000010540 #28 Lef1 (ENSPEMG00000011796) #29 Hadh (ENSPEMG00000020330) #30 Cyp2u1 (ENSPEMG00000012213) #31 Sgms2 (ENSPEMG00000027110) #32 Papss1 (ENSPEMG00000008733) Dkk2 (ENSPEMG00000024321) Gimd1 (ENSPEMG00000010104) Aimp1 (ENSPEMG00000003730) Tbck (ENSPEMG00000008071) Northern American deer mouse MODERN SPECIES 4 ENSPEMG00000029175 Sphkap (ENSPEMG00000023700) Daw1 (ENSPEMG00000013917) Ccl20 (ENSPEMG00000023283) Krtap28-13 (ENSPEMG00000026790) Gm47969 (ENSPEMG00000027248) Slc19a3 (ENSPEMG00000021706) Agfg1 (ENSPEMG00000024218) Tm4sf20 (ENSPEMG00000009177) Mff (ENSPEMG00000013271) Col4a3 (ENSPEMG00000022581) Col4a4 (ENSPEMG00000023902) Rhbdd1 (ENSPEMG00000022110) Irs1 (ENSPEMG00000021324) Nyap2 (ENSPEMG00000010633) ENSPEMG00000000818 #22 Dock10 (ENSPEMG00000015775) Gm45261 (ENSPEMG00000011756) Cul3 (ENSPEMG00000015883) Fam124b (ENSPEMG00000012555) Serpine2 (ENSPEMG00000015844) Mrpl44 (ENSPEMG00000012661) Wdfy1 (ENSPEMG00000008677) Ap1s3 (ENSPEMG00000026332) ENSPEMG00000014464 ##28 Scg2 (ENSPEMG00000017237) Kcne4 (ENSPEMG00000028440) Acsl3 (ENSPEMG00000011122) Utp14b (ENSPEMG00000028398) Mogat1 (ENSPEMG00000014100) Farsb (ENSPEMG00000003131) Murinae ANCESTRAL SPECIES 5 ENSGT00940000162335 ENSGT00940000162895 ENSGT00940000159753 ENSGT00940000154589.b ENSGT00390000002219 ENSGT00940000154340.A ENSGT00940000162789 ENSGT00940000156946 ENSGT01050000244965.b #15 ENSGT00940000158366 ENSGT00940000156627 #17 ENSGT01100000263524.I ENSGT00730000111223 #18 ENSGT00930000151042 #19 ENSGT00390000008798.c #21 ENSGT00940000155140 #22 ENSGT00940000158059 #23 ENSGT00950000182924.B.a.a #24 ENSGT00940000159823 #25 ENSGT00940000157910 #26 ENSGT00390000001376 #27 ENSGT00390000008294.e.b.a.b ##28 ENSGT00940000159660 #29 ENSGT00940000159984 #30 ENSGT00940000157714 #31 ENSGT00940000157370 #32 ENSGT00390000009613.b ENSGT00940000162188 ENSGT00530000069080 ENSGT00940000154950 ENSGT00940000158244 Mus ANCESTRAL SPECIES 7 ENSGT00940000162335 ENSGT00940000162895 ENSGT00940000159753 ENSGT00940000154589.b ENSGT00390000002219 ENSGT00940000154340.A ENSGT00940000162789 ENSGT00940000156946 ENSGT01050000244965.b #15 ENSGT00940000158366 ENSGT00940000156627 #17 ENSGT01100000263524.I ENSGT00730000111223 #18 ENSGT00930000151042 #19 ENSGT00390000008798.c #21 ENSGT00940000155140 #22 ENSGT00940000158059 #23 ENSGT00950000182924.B.a.a #24 ENSGT00940000159823 #25 ENSGT00940000157910 #26 ENSGT00390000001376 #27 ENSGT00390000008294.e.b.a.b ##28 ENSGT00940000159660 #29 ENSGT00940000159984 #30 ENSGT00940000157714 #31 ENSGT00940000157370 #32 ENSGT00390000009613.b ENSGT00940000162188 ENSGT00530000069080 ENSGT00940000154950 ENSGT00940000158244 Mus_A ANCESTRAL SPECIES 9 ENSGT00940000162335 ENSGT00940000162895 ENSGT00940000159753 ENSGT00940000154589.b ENSGT00390000002219 ENSGT00940000154340.A ENSGT00940000162789 ENSGT00940000156946 ENSGT01050000244965.b #15 ENSGT00940000158366 ENSGT00940000156627 #17 ENSGT01100000263524.I ENSGT00730000111223 #18 ENSGT00930000151042 #19 ENSGT00390000008798.c #21 ENSGT00940000155140 #22 ENSGT00940000158059 #23 ENSGT00950000182924.B.a.a #24 ENSGT00940000159823 #25 ENSGT00940000157910 #26 ENSGT00390000001376 #27 ENSGT00390000008294.e.b.a.b ##28 ENSGT00940000159660 #29 ENSGT00940000159984 #30 ENSGT00940000157714 #31 ENSGT00940000157370 #32 ENSGT00390000009613.b ENSGT00940000162188 ENSGT00530000069080 ENSGT00940000154950 ENSGT00940000158244 Mus_B ANCESTRAL SPECIES 8 ENSGT00940000162335 ENSGT00940000162895 ENSGT00940000159753 ENSGT00940000154589.b ENSGT00390000002219 ENSGT00940000154340.A ENSGT00940000162789 ENSGT00940000156946 ENSGT01050000244965.b #15 ENSGT00940000158366 ENSGT00940000156627 #17 ENSGT01100000263524.I ENSGT00730000111223 #18 ENSGT00930000151042 #19 ENSGT00390000008798.c #21 ENSGT00940000155140 #22 ENSGT00940000158059 #23 ENSGT00950000182924.B.a.a #24 ENSGT00940000159823 #25 ENSGT00940000157910 #26 ENSGT00390000001376 #27 ENSGT00390000008294.e.b.a.b ##28 ENSGT00940000159660 #29 ENSGT00940000159984 #30 ENSGT00940000157714 #31 ENSGT00940000157370 #32 ENSGT00390000009613.b ENSGT00940000162188 ENSGT00530000069080 ENSGT00940000154950 ENSGT00940000158244 Mouse MODERN SPECIES 12 Zgrf1 (ENSMUSG00000051278) Neurog2 (ENSMUSG00000027967) Alpk1 (ENSMUSG00000028028) Tifa (ENSMUSG00000046688) Ap1ar (ENSMUSG00000074238) Fam241a (ENSMUSG00000050549) Pitx2 (ENSMUSG00000028023) Enpep (ENSMUSG00000028024) Elovl6 (ENSMUSG00000041220) #15 Egf (ENSMUSG00000028017) Lrit3 (ENSMUSG00000093865) #17 Rrh (ENSMUSG00000028012) Gar1 (ENSMUSG00000028010) #18 Cfi (ENSMUSG00000058952) #19 Pla2g12a (ENSMUSG00000027999) #21 Casp6 (ENSMUSG00000027997) #22 Mcub (ENSMUSG00000027994) #23 Sec24b (ENSMUSG00000001052) #24 Col25a1 (ENSMUSG00000058897) #25 Etnppl (ENSMUSG00000019232) #26 Ostc (ENSMUSG00000041084) #27 Rpl34 (ENSMUSG00000062006) ##28 Lef1 (ENSMUSG00000027985) #29 Hadh (ENSMUSG00000027984) #30 Cyp2u1 (ENSMUSG00000027983) #31 Sgms2 (ENSMUSG00000050931) #32 Papss1 (ENSMUSG00000028032) Dkk2 (ENSMUSG00000028031) Gimd1 (ENSMUSG00000091721) Aimp1 (ENSMUSG00000028029) Tbck (ENSMUSG00000028030) Mus_C ANCESTRAL SPECIES 6 ENSGT00940000162335 ENSGT00940000162895 ENSGT00940000159753 ENSGT00940000154589.b ENSGT00390000002219 ENSGT00940000154340.A ENSGT00940000162789 ENSGT00940000156946 ENSGT01050000244965.b #15 ENSGT00940000158366 ENSGT00940000156627 #17 ENSGT01100000263524.I ENSGT00730000111223 #18 ENSGT00930000151042 #19 ENSGT00390000008798.c #21 ENSGT00940000155140 #22 ENSGT00940000158059 #23 ENSGT00950000182924.B.a.a #24 ENSGT00940000159823 #25 ENSGT00940000157910 #26 ENSGT00390000001376 #27 ENSGT00390000008294.e.b.a.b ##28 ENSGT00940000159660 #29 ENSGT00940000159984 #30 ENSGT00940000157714 #31 ENSGT00940000157370 #32 ENSGT00390000009613.b ENSGT00940000162188 ENSGT00530000069080 ENSGT00940000154950 ENSGT00940000158244 spretus MODERN SPECIES 12 Zgrf1 (MGP_SPRETEiJ_G0026568) Neurog2 (MGP_SPRETEiJ_G0026569) Alpk1 (MGP_SPRETEiJ_G0026570) Tifa (MGP_SPRETEiJ_G0026571) Ap1ar (MGP_SPRETEiJ_G0026572) Fam241a (MGP_SPRETEiJ_G0026573) Pitx2 (MGP_SPRETEiJ_G0026574) Enpep (MGP_SPRETEiJ_G0026575) Elovl6 (MGP_SPRETEiJ_G0026576) #15 Egf (MGP_SPRETEiJ_G0026577) Lrit3 (MGP_SPRETEiJ_G0026578) #17 Rrh (MGP_SPRETEiJ_G0026579) Gar1 (MGP_SPRETEiJ_G0026580) #18 MGP_SPRETEiJ_G0026581 #19 Pla2g12a (MGP_SPRETEiJ_G0026582) #21 Casp6 (MGP_SPRETEiJ_G0026583) #22 Mcub (MGP_SPRETEiJ_G0026584) #23 Sec24b (MGP_SPRETEiJ_G0026585) #24 Col25a1 (MGP_SPRETEiJ_G0026586) #25 Etnppl (MGP_SPRETEiJ_G0026587) #26 Ostc (MGP_SPRETEiJ_G0026588) #27 Rpl34 (MGP_SPRETEiJ_G0026589) ##28 Lef1 (MGP_SPRETEiJ_G0026590) #29 Hadh (MGP_SPRETEiJ_G0026591) #30 Cyp2u1 (MGP_SPRETEiJ_G0026592) #31 Sgms2 (MGP_SPRETEiJ_G0026593) #32 Papss1 (MGP_SPRETEiJ_G0026594) Dkk2 (MGP_SPRETEiJ_G0026595) Gimd1 (MGP_SPRETEiJ_G0026596) Aimp1 (MGP_SPRETEiJ_G0026597) Tbck (MGP_SPRETEiJ_G0026598) Steppe mouse MODERN SPECIES 3091 ENSMSIG00000030559 Egf (ENSMSIG00000030560) Lrit3 (ENSMSIG00000030577) #17 Rrh (ENSMSIG00000030581) Gar1 (ENSMSIG00000030600) #18 Cfi (ENSMSIG00000030603) #19 Pla2g12a (ENSMSIG00000030605) #21 Casp6 (ENSMSIG00000030608) #22 Mcub (ENSMSIG00000030610) #23 Sec24b (ENSMSIG00000030615) #24 Col25a1 (ENSMSIG00000030632) #25 Etnppl (ENSMSIG00000030647) #26 Ostc (ENSMSIG00000030653) #27 Rpl34 (ENSMSIG00000030659) ##28 ENSMSIG00000030662 ENSMSIG00000030668 Lef1 (ENSMSIG00000030670) #29 Hadh (ENSMSIG00000030700) #30 Cyp2u1 (ENSMSIG00000030701) #31 Sgms2 (ENSMSIG00000030706) #32 Papss1 (ENSMSIG00000030712) Ryukyu mouse MODERN SPECIES 12 Zgrf1 (MGP_CAROLIEiJ_G0025615) Neurog2 (MGP_CAROLIEiJ_G0025616) Alpk1 (MGP_CAROLIEiJ_G0025617) Tifa (MGP_CAROLIEiJ_G0025618) Ap1ar (MGP_CAROLIEiJ_G0025619) Fam241a (MGP_CAROLIEiJ_G0025620) Pitx2 (MGP_CAROLIEiJ_G0025621) Enpep (MGP_CAROLIEiJ_G0025622) Elovl6 (MGP_CAROLIEiJ_G0025623) #15 Egf (MGP_CAROLIEiJ_G0025624) Lrit3 (MGP_CAROLIEiJ_G0025625) #17 Rrh (MGP_CAROLIEiJ_G0025626) Gar1 (MGP_CAROLIEiJ_G0025627) #18 Cfi (MGP_CAROLIEiJ_G0025628) #19 Pla2g12a (MGP_CAROLIEiJ_G0025629) #21 Casp6 (MGP_CAROLIEiJ_G0025630) #22 Mcub (MGP_CAROLIEiJ_G0025631) #23 Sec24b (MGP_CAROLIEiJ_G0025632) #24 Col25a1 (MGP_CAROLIEiJ_G0025633) #25 Etnppl (MGP_CAROLIEiJ_G0025634) #26 Ostc (MGP_CAROLIEiJ_G0025635) #27 Rpl34 (MGP_CAROLIEiJ_G0025636) ##28 Lef1 (MGP_CAROLIEiJ_G0025637) #29 Hadh (MGP_CAROLIEiJ_G0025638) #30 Cyp2u1 (MGP_CAROLIEiJ_G0025639) #31 Sgms2 (MGP_CAROLIEiJ_G0025640) #32 Papss1 (MGP_CAROLIEiJ_G0025641) Dkk2 (MGP_CAROLIEiJ_G0025642) Gimd1 (MGP_CAROLIEiJ_G0025643) Aimp1 (MGP_CAROLIEiJ_G0025644) Tbck (MGP_CAROLIEiJ_G0025645) Shrew mouse MODERN SPECIES 17 Alpk1 (MGP_PahariEiJ_G0027064) Tifa (MGP_PahariEiJ_G0027065) Ap1ar (MGP_PahariEiJ_G0027066) Fam241a (MGP_PahariEiJ_G0027067) Pitx2 (MGP_PahariEiJ_G0027068) Enpep (MGP_PahariEiJ_G0027069) MGP_PahariEiJ_G0027070 MGP_PahariEiJ_G0027071 Elovl6 (MGP_PahariEiJ_G0027072) #15 Egf (MGP_PahariEiJ_G0027073) Lrit3 (MGP_PahariEiJ_G0027074) #17 Rrh (MGP_PahariEiJ_G0027075) Gar1 (MGP_PahariEiJ_G0027076) #18 Cfi (MGP_PahariEiJ_G0027077) #19 Pla2g12a (MGP_PahariEiJ_G0027078) #21 Casp6 (MGP_PahariEiJ_G0027079) #22 Mcub (MGP_PahariEiJ_G0027080) #23 Sec24b (MGP_PahariEiJ_G0027081) #24 Col25a1 (MGP_PahariEiJ_G0027082) #25 Etnppl (MGP_PahariEiJ_G0027083) #26 Ostc (MGP_PahariEiJ_G0027084) #27 Rpl34 (MGP_PahariEiJ_G0027085) ##28 Lef1 (MGP_PahariEiJ_G0027086) #29 Hadh (MGP_PahariEiJ_G0027087) #30 Cyp2u1 (MGP_PahariEiJ_G0027088) #31 Sgms2 (MGP_PahariEiJ_G0027089) #32 Papss1 (MGP_PahariEiJ_G0027090) Dkk2 (MGP_PahariEiJ_G0027091) Gimd1 (MGP_PahariEiJ_G0027092) Aimp1 (MGP_PahariEiJ_G0027093) Tbck (MGP_PahariEiJ_G0027094) Rat MODERN SPECIES 11 Tifa (ENSRNOG00000010941) Ap1ar (ENSRNOG00000024492) Fam241a (ENSRNOG00000010875) LOC108350287 (ENSRNOG00000062474) Pitx2 (ENSRNOG00000010681) Enpep (ENSRNOG00000051854) Dcm5 (ENSRNOG00000048459) AABR07034008.1 (ENSRNOG00000001601) Elovl6 (ENSRNOG00000048949) #15 Egf (ENSRNOG00000053979) Lrit3 (ENSRNOG00000061097) #17 Rrh (ENSRNOG00000053349) Gar1 (ENSRNOG00000061146) #18 Cfi (ENSRNOG00000053400) #19 Pla2g12a (ENSRNOG00000057470) #21 Casp6 (ENSRNOG00000052613) #22 Mcub (ENSRNOG00000009433) #23 Sec24b (ENSRNOG00000023373) #24 Col25a1 (ENSRNOG00000050706) #25 Etnppl (ENSRNOG00000045743) #26 Ostc (ENSRNOG00000023322) #27 Rpl34 (ENSRNOG00000016387) ##28 LOC108350290 (ENSRNOG00000069431) AABR07013412.1 (ENSRNOG00000055035) Lef1 (ENSRNOG00000010121) #29 Hadh (ENSRNOG00000010697) #30 Cyp2u1 (ENSRNOG00000011053) #31 Sgms2 (ENSRNOG00000011284) #32 Papss1 (ENSRNOG00000011311) Dkk2 (ENSRNOG00000011360) ENSRNOG00000066474 Lesser Egyptian jerboa MODERN SPECIES 67 Neurog2 (ENSJJAG00000000627) Alpk1 (ENSJJAG00000012764) ENSJJAG00000006863 Tifa (ENSJJAG00000014646) Ap1ar (ENSJJAG00000021104) Fam241a (ENSJJAG00000020356) ENSJJAG00000018533 Enpep (ENSJJAG00000012504) Elovl6 (ENSJJAG00000015160) #15 Egf (ENSJJAG00000010062) Lrit3 (ENSJJAG00000017146) #17 Rrh (ENSJJAG00000015448) Gar1 (ENSJJAG00000010063) #18 Cfi (ENSJJAG00000008398) #19 ENSJJAG00000002887 #21 Casp6 (ENSJJAG00000021538) #22 Mcub (ENSJJAG00000020581) #23 Sec24b (ENSJJAG00000020289) #24 Kangaroo rat MODERN SPECIES 389 ENSDORG00000029578 Neurog2 (ENSDORG00000026770) Alpk1 (ENSDORG00000012751) Tifa (ENSDORG00000028757) ENSDORG00000025544 ENSDORG00000029098 ENSDORG00000002323 Enpep (ENSDORG00000016065) Elovl6 (ENSDORG00000029654) #15 ENSDORG00000000490 Lrit3 (ENSDORG00000027458) #17 Rrh (ENSDORG00000000486) Gar1 (ENSDORG00000000482) #18 Cfi (ENSDORG00000011881) #19 Pla2g12a (ENSDORG00000011877) #21 Casp6 (ENSDORG00000012993) #22 Mcub (ENSDORG00000012992) #23 Sec24b (ENSDORG00000003039) #24 ENSDORG00000024600 Col25a1 (ENSDORG00000004118) #25 Etnppl (ENSDORG00000004115) #26 Ostc (ENSDORG00000027386) #27 Rpl34 (ENSDORG00000025054) ##28 Lef1 (ENSDORG00000007694) #29 Hadh (ENSDORG00000015829) #30 Cyp2u1 (ENSDORG00000010109) #31 Sgms2 (ENSDORG00000010107) #32 Papss1 (ENSDORG00000010043) Dkk2 (ENSDORG00000025181) Gimd1 (ENSDORG00000026034) ENSDORG00000005018 Rodentia_A ANCESTRAL SPECIES 24 ENSGT00940000162335 ENSGT00940000162895 ENSGT00940000159753 ENSGT00940000154589.b ENSGT00390000002219 ENSGT00940000154340.A ENSGT00940000162789 ENSGT00940000156946 ENSGT01050000244965.b #15 ENSGT00940000158366 ENSGT00940000156627 #17 ENSGT01100000263524.I ENSGT00730000111223 #18 ENSGT00930000151042 #19 ENSGT00390000008798.c #21 ENSGT00940000155140 #22 ENSGT00940000158059 #23 ENSGT00950000182924.B.a.a #24 ENSGT00940000159823 #25 ENSGT00940000157910 #26 ENSGT00390000001376 #27 ENSGT00390000008294.f ##28 ENSGT00390000008294.e.b.a.a #28 ENSGT00940000159660 #29 ENSGT00940000159984 #30 ENSGT00940000157714 #31 ENSGT00940000157370 #32 ENSGT00390000009613.b ENSGT00940000162188 ENSGT00530000069080 ENSGT00940000154950 Hystricomorpha ANCESTRAL SPECIES 38 ENSGT00940000162895 ENSGT00940000159753 ENSGT00940000154589.b ENSGT00390000002219 ENSGT00940000162789 ENSGT00940000168645 ENSGT00940000154340.A ENSGT00940000156946 ENSGT01050000244965.b #15 ENSGT00940000158366 ENSGT00940000156627 #17 ENSGT01100000263524.I ENSGT00730000111223 #18 ENSGT00930000151042 #19 ENSGT00390000008798.c #21 ENSGT00940000155140 #22 ENSGT00940000158059 #23 ENSGT00950000182924.B.a.a #24 ENSGT00940000159823 #25 ENSGT00940000157910 #26 ENSGT00390000001376 #27 ENSGT00390000008294.f ##28 ENSGT00390000008294.e.b.a.a #28 ENSGT00940000159660 #29 ENSGT00940000159984 #30 ENSGT00940000157714 #31 ENSGT00940000157370 #32 ENSGT00390000009613.b ENSGT00940000162188 ENSGT00530000069080 ENSGT00940000154950 Naked mole-rat female MODERN SPECIES 19 PAPSS1 (ENSHGLG00000001783) ENSHGLG00000038714 #31 HADH (ENSHGLG00000032988) #30 LEF1 (ENSHGLG00000046551) #29 RPL34 (ENSHGLG00000050296) ##28 ENSHGLG00000001959 #27 ENSHGLG00000004469 #26 ENSHGLG00000047113 ENPEP (ENSHGLG00000002965) ELOVL6 (ENSHGLG00000037368) #15 ENSHGLG00000034086 ENSHGLG00000002404 RRH (ENSHGLG00000004643) GAR1 (ENSHGLG00000000493) #18 PLA2G12A (ENSHGLG00000000692) #21 CASP6 (ENSHGLG00000000729) #22 ENSHGLG00000000975 #23 ENSHGLG00000001432 #24 ENSHGLG00000003109 ENSHGLG00000036692 ENSHGLG00000046553 ENSHGLG00000001486 LARP7 (ENSHGLG00000002716) NEUROG2 (ENSHGLG00000044856) ENSHGLG00000020125 ALPK1 (ENSHGLG00000019570) TIFA (ENSHGLG00000033392) ENSHGLG00000002634 ENSHGLG00000035535 ENSHGLG00000048412 ENSHGLG00000037923 Hystricomorpha_a ANCESTRAL SPECIES 34 ENSGT00940000162895 ENSGT00940000159753 ENSGT00940000154589.b ENSGT00390000002219 ENSGT00940000162789 ENSGT00940000168645 ENSGT00940000154340.A ENSGT00940000156946 ENSGT01050000244965.b #15 ENSGT00940000158366 ENSGT00940000156627 #17 ENSGT01100000263524.I ENSGT00730000111223 #18 ENSGT00930000151042 #19 ENSGT00390000008798.c #21 ENSGT00940000155140 #22 ENSGT00940000158059 #23 ENSGT00950000182924.B.a.a #24 ENSGT00940000159823 #25 ENSGT00940000157910 #26 ENSGT00390000001376 #27 ENSGT00390000008294.e.b.a.a #28 ENSGT00940000159660 #29 ENSGT00940000159984 #30 ENSGT00940000157714 #31 ENSGT00940000157370 #32 ENSGT00390000009613.b ENSGT00940000162188 ENSGT00530000069080 ENSGT00940000154950 ENSGT00940000158244 Guinea pig MODERN SPECIES 43 ENSCPOG00000038161 ALPK1 (ENSCPOG00000008412) TIFA (ENSCPOG00000036501) AP1AR (ENSCPOG00000032660) ENSCPOG00000005214 FAM241A (ENSCPOG00000013964) ENSCPOG00000009459 ENPEP (ENSCPOG00000000701) ELOVL6 (ENSCPOG00000038802) #15 EGF (ENSCPOG00000000779) LRIT3 (ENSCPOG00000000776) #17 RRH (ENSCPOG00000004217) GAR1 (ENSCPOG00000004216) #18 CFI (ENSCPOG00000004214) #19 PLA2G12A (ENSCPOG00000004212) #21 CASP6 (ENSCPOG00000031434) #22 ENSCPOG00000002110 #23 ENSCPOG00000022594 SEC24B (ENSCPOG00000009212) #24 COL25A1 (ENSCPOG00000012595) #25 ETNPPL (ENSCPOG00000015368) #26 OSTC (ENSCPOG00000039456) #27 ENSCPOG00000037181 #28 LEF1 (ENSCPOG00000013758) #29 HADH (ENSCPOG00000024229) #30 CYP2U1 (ENSCPOG00000011750) #31 SGMS2 (ENSCPOG00000032233) #32 PAPSS1 (ENSCPOG00000011505) DKK2 (ENSCPOG00000030616) AIMP1 (ENSCPOG00000006734) TBCK (ENSCPOG00000006708) Hystricomorpha_b ANCESTRAL SPECIES 52 ENSGT00940000162895 ENSGT00940000159753 ENSGT00940000154589.b ENSGT00390000002219 ENSGT00940000168645 ENSGT00940000154340.A ENSGT00940000162789 ENSGT00940000156946 ENSGT01050000244965.b #15 ENSGT00940000158366 ENSGT00940000156627 #17 ENSGT01100000263524.I ENSGT00730000111223 #18 ENSGT00930000151042 #19 ENSGT00390000008798.c #21 ENSGT00940000155140 #22 ENSGT00940000158059 #23 ENSGT00950000182924.B.a.a #24 ENSGT00940000159823 #25 ENSGT00940000157910 #26 ENSGT00390000001376 #27 ENSGT00390000008294.f ##28 ENSGT00390000008294.e.b.a.a #28 ENSGT00940000159660 #29 ENSGT00940000159984 #30 ENSGT00940000157714 #31 ENSGT00940000157370 #32 ENSGT00390000009613.b ENSGT00940000162188 ENSGT00530000069080 ENSGT00940000154950 Degu MODERN SPECIES 57 ENSODEG00000009949 ENSODEG00000019796 ENSODEG00000010616 FAM241A (ENSODEG00000011489) ENSODEG00000019979 PITX2 (ENSODEG00000010082) ENSODEG00000010195 ENSODEG00000011196 #15 ENSODEG00000009818 ENSODEG00000010355 LRIT3 (ENSODEG00000014302) #17 RRH (ENSODEG00000010773) GAR1 (ENSODEG00000011083) #18 CFI (ENSODEG00000010069) #19 ENSODEG00000011603 #21 CASP6 (ENSODEG00000010252) #22 MCUB (ENSODEG00000010641) #23 SEC24B (ENSODEG00000011940) #24 ENSODEG00000019962 ENSODEG00000011204 COL25A1 (ENSODEG00000011565) #25 ETNPPL (ENSODEG00000011007) #26 OSTC (ENSODEG00000011874) #27 ENSODEG00000012716 ##28 ENSODEG00000019987 LEF1 (ENSODEG00000010436) #29 HADH (ENSODEG00000011168) #30 CYP2U1 (ENSODEG00000010344) #31 SGMS2 (ENSODEG00000010387) #32 PAPSS1 (ENSODEG00000012464) DKK2 (ENSODEG00000013005) Long-tailed chinchilla MODERN SPECIES 203 ENSCLAG00000002990 ELOVL6 (ENSCLAG00000003163) #15 EGF (ENSCLAG00000003331) LRIT3 (ENSCLAG00000004694) #17 RRH (ENSCLAG00000005130) GAR1 (ENSCLAG00000005335) #18 CFI (ENSCLAG00000006216) #19 PLA2G12A (ENSCLAG00000006595) #21 CASP6 (ENSCLAG00000003293) #22 MCUB (ENSCLAG00000003597) #23 SEC24B (ENSCLAG00000004027) #24 ENSCLAG00000002421 COL25A1 (ENSCLAG00000002719) #25 ETNPPL (ENSCLAG00000002982) #26 OSTC (ENSCLAG00000003790) #27 ENSCLAG00000003911 #28 LEF1 (ENSCLAG00000003044) #29 HADH (ENSCLAG00000003966) #30 CYP2U1 (ENSCLAG00000002674) #31 SGMS2 (ENSCLAG00000002723) #32 PAPSS1 (ENSCLAG00000002840) DKK2 (ENSCLAG00000002881) GIMD1 (ENSCLAG00000003485) AIMP1 (ENSCLAG00000003954) Sciuridae ANCESTRAL SPECIES 43 ENSGT00940000162642 ENSGT00940000162335 ENSGT00940000162895 ENSGT00940000159753 ENSGT00940000154589.b ENSGT00390000002219 ENSGT00940000154340.A ENSGT00940000156946 ENSGT01050000244965.b #15 ENSGT00940000158366 ENSGT00940000156627 #17 ENSGT01100000263524.I ENSGT00730000111223 #18 ENSGT00930000151042 #19 ENSGT00390000008798.c #21 ENSGT00940000155140 #22 ENSGT00940000158059 #23 ENSGT00950000182924.B.a.a #24 ENSGT00940000159823 #25 ENSGT00940000157910 #26 ENSGT00390000001376 #27 ENSGT00390000008294.e.b.a.b ##28 ENSGT00940000159660 #29 ENSGT00940000159984 #30 ENSGT00940000157714 #31 ENSGT00940000157370 #32 ENSGT00390000009613.b ENSGT00940000162188 ENSGT00530000069080 ENSGT00940000154950 ENSGT00940000158244 Marmotini ANCESTRAL SPECIES 51 ENSGT00940000162642 ENSGT00940000162335 ENSGT00940000162895 ENSGT00940000159753 ENSGT00940000154589.b ENSGT00390000002219 ENSGT00940000154340.A ENSGT00940000156946 ENSGT01050000244965.b #15 ENSGT00940000158366 ENSGT00940000156627 #17 ENSGT01100000263524.I ENSGT00730000111223 #18 ENSGT00930000151042 #19 ENSGT00390000008798.c #21 ENSGT00940000155140 #22 ENSGT00940000158059 #23 ENSGT00950000182924.B.a.a #24 ENSGT00940000159823 #25 ENSGT00940000157910 #26 ENSGT00390000001376 #27 ENSGT00390000008294.f ##28 ENSGT00940000159660 #29 ENSGT00940000159984.e #30 ENSGT00940000157714.g #31 ENSGT00940000157714.h #31 ENSGT00940000157370 #32 ENSGT00390000009613.b ENSGT00940000162188 ENSGT00530000069080 ENSGT00940000154950 Marmotini_b ANCESTRAL SPECIES 164 ENSGT00940000162642 ENSGT00940000162335 ENSGT00940000162895 ENSGT00940000159753 ENSGT00940000154589.b ENSGT00390000002219 ENSGT00940000154340.A ENSGT00940000156946 ENSGT01050000244965.b #15 ENSGT00940000158366 ENSGT00940000156627 #17 ENSGT01100000263524.I ENSGT00730000111223 #18 ENSGT00930000151042 #19 ENSGT00390000008798.c #21 ENSGT00940000155140 #22 ENSGT00940000158059 #23 ENSGT00950000182924.B.a.a #24 ENSGT00730000111880 ENSGT00940000157910 #26 Squirrel MODERN SPECIES 163 ENSSTOG00000025752 ENSSTOG00000011761 NEUROG2 (ENSSTOG00000011758) ALPK1 (ENSSTOG00000023490) TIFA (ENSSTOG00000024540) AP1AR (ENSSTOG00000011726) FAM241A (ENSSTOG00000026762) ENSSTOG00000025728 ENPEP (ENSSTOG00000019984) ELOVL6 (ENSSTOG00000013096) #15 LRIT3 (ENSSTOG00000019825) #17 RRH (ENSSTOG00000026445) GAR1 (ENSSTOG00000005577) #18 CFI (ENSSTOG00000013356) #19 PLA2G12A (ENSSTOG00000007365) #21 CASP6 (ENSSTOG00000022572) #22 MCUB (ENSSTOG00000012419) #23 SEC24B (ENSSTOG00000025309) #24 ENSSTOG00000030771 ETNPPL (ENSSTOG00000021812) #26 Arctic ground squirrel MODERN SPECIES 681 CASP6 (ENSUPAG00010023134) #22 MCUB (ENSUPAG00010000046) #23 SEC24B (ENSUPAG00010000070) #24 ENSUPAG00010000214 Alpin marmot MODERN SPECIES 14 TIFA (ENSMMMG00000011166) AP1AR (ENSMMMG00000011129) ENSMMMG00000011118 ENSMMMG00000011114 ENSMMMG00000011061 ENPEP (ENSMMMG00000011011) ENSMMMG00000011001 ELOVL6 (ENSMMMG00000010968) #15 EGF (ENSMMMG00000010685) ENSMMMG00000010673 LRIT3 (ENSMMMG00000010663) #17 RRH (ENSMMMG00000010634) GAR1 (ENSMMMG00000010623) #18 CFI (ENSMMMG00000010613) #19 PLA2G12A (ENSMMMG00000010605) #21 CASP6 (ENSMMMG00000010597) #22 SEC24B (ENSMMMG00000010546) #24 COL25A1 (ENSMMMG00000010402) #25 ETNPPL (ENSMMMG00000010343) #26 OSTC (ENSMMMG00000010326) #27 RPL34 (ENSMMMG00000010314) ##28 LEF1 (ENSMMMG00000010193) #29 ENSMMMG00000010164 #30 ENSMMMG00000010161 #31 ENSMMMG00000010155 #31 SGMS2 (ENSMMMG00000010143) #32 PAPSS1 (ENSMMMG00000010079) DKK2 (ENSMMMG00000010025) ENSMMMG00000009991 GIMD1 (ENSMMMG00000009944) AIMP1 (ENSMMMG00000009938) Eurasian red squirrel DUPLICATION Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 18 ENSSVLG00005025981 ENSSVLG00005025982 FAM241A (ENSSVLG00005025983) ENSSVLG00005025985 ENSSVLG00005025987 ENPEP (ENSSVLG00005025988) ENSSVLG00005025989 ENSSVLG00005025991 ELOVL6 (ENSSVLG00005025992) #15 EGF (ENSSVLG00005025994) LRIT3 (ENSSVLG00005025995) #17 RRH (ENSSVLG00005025996) GAR1 (ENSSVLG00005025997) #18 CFI (ENSSVLG00005025998) #19 PLA2G12A (ENSSVLG00005025999) #21 ENSSVLG00005026000 #22 MCUB (ENSSVLG00005026001) #23 SEC24B (ENSSVLG00005026003) #24 ENSSVLG00005026004 COL25A1 (ENSSVLG00005026005) #25 ENSSVLG00005026006 ETNPPL (ENSSVLG00005026007) #26 OSTC (ENSSVLG00005026008) #27 RPL34 (ENSSVLG00005026009) ##28 ENSSVLG00005026011 ENSSVLG00005026012 #29 HADH (ENSSVLG00005026013) #30 CYP2U1 (ENSSVLG00005026014) #31 SGMS2 (ENSSVLG00005026015) #32 PAPSS1 (ENSSVLG00005026017) DKK2 (ENSSVLG00005026018) Eurasian red squirrel MODERN SPECIES 12 ENSSVLG00005023476 FOXJ1 (ENSSVLG00005023500) EXOC7 (ENSSVLG00005023572) ZACN (ENSSVLG00005023709) GALR2 (ENSSVLG00005023761) ENSSVLG00005023780 SRP68 (ENSSVLG00005023814) EVPL (ENSSVLG00005023880) CDK3 (ENSSVLG00005023973) TEN1 (ENSSVLG00005023999) ACOX1 (ENSSVLG00005024030) FBF1 (ENSSVLG00005024129) MRPL38 (ENSSVLG00005024310) TRIM65 (ENSSVLG00005024357) TRIM47 (ENSSVLG00005024378) ENSSVLG00005024393 #22 ENSSVLG00005024404 WBP2 (ENSSVLG00005024432) UNC13D (ENSSVLG00005024494) UNK (ENSSVLG00005024600) ENSSVLG00005024623 GALK1 (ENSSVLG00005024646) SAP30BP (ENSSVLG00005005528) RECQL5 (ENSSVLG00005005580) ENSSVLG00005005683 SMIM5 (ENSSVLG00005005693) ENSSVLG00005005738 ENSSVLG00005005769 LLGL2 (ENSSVLG00005005886) TSEN54 (ENSSVLG00005005927) ENSSVLG00005005957 Eurasian red squirrel MODERN SPECIES 17 CRYBB3 (ENSSVLG00005010026) CRYBB2 (ENSSVLG00005010113) GRK3 (ENSSVLG00005010169) ENSSVLG00005010401 SEZ6L (ENSSVLG00005010713) ASPHD2 (ENSSVLG00005012225) HPS4 (ENSSVLG00005012268) SRRD (ENSSVLG00005012323) TFIP11 (ENSSVLG00005012439) TPST2 (ENSSVLG00005012485) CRYBB1 (ENSSVLG00005012526) CRYBA4 (ENSSVLG00005012608) MN1 (ENSSVLG00005012679) PITPNB (ENSSVLG00005012735) TTC28 (ENSSVLG00005012954) ENSSVLG00005013048 #22 CHEK2 (ENSSVLG00005013622) HSCB (ENSSVLG00005013889) ENSSVLG00005013977 XBP1 (ENSSVLG00005014110) ENSSVLG00005014358 ZNRF3 (ENSSVLG00005014418) C22orf31 (ENSSVLG00005014531) KREMEN1 (ENSSVLG00005014585) EMID1 (ENSSVLG00005014741) RHBDD3 (ENSSVLG00005015229) ENSSVLG00005015564 GAS2L1 (ENSSVLG00005016901) RASL10A (ENSSVLG00005016957) AP1B1 (ENSSVLG00005017064) ENSSVLG00005017183 Lagomorpha ANCESTRAL SPECIES 45 ENSGT00940000162895 ENSGT00940000162335 ENSGT00940000159753 ENSGT00940000154589.b ENSGT00390000002219 ENSGT00940000154340.A ENSGT00940000162789 ENSGT00940000156946 ENSGT01050000244965.b #15 ENSGT00940000158366 ENSGT00940000156627 #17 ENSGT01100000263524.I ENSGT00730000111223 #18 ENSGT00930000151042 #19 ENSGT00390000008798.c #21 ENSGT00940000155140 #22 ENSGT00940000158059 #23 ENSGT00940000159823 #25 ENSGT00940000157910 #26 ENSGT00390000001376 #27 ENSGT00390000008294.f ##28 ENSGT00940000159660 #29 ENSGT00940000159984 #30 ENSGT00940000157714 #31 ENSGT00940000157370 #32 ENSGT00390000009613.b ENSGT00940000162188 ENSGT00530000069080 ENSGT00940000154950 ENSGT00940000158244 ENSGT00930000150973.B Rabbit MODERN SPECIES 6 NEUROG2 (ENSOCUG00000007063) ENSOCUG00000010848 ALPK1 (ENSOCUG00000024991) TIFA (ENSOCUG00000017578) AP1AR (ENSOCUG00000004413) FAM241A (ENSOCUG00000011383) PITX2 (ENSOCUG00000012685) ENPEP (ENSOCUG00000016264) ELOVL6 (ENSOCUG00000013069) #15 EGF (ENSOCUG00000016388) LRIT3 (ENSOCUG00000003908) #17 MCUB (ENSOCUG00000013751) #23 RRH (ENSOCUG00000034648) GAR1 (ENSOCUG00000003901) #18 CFI (ENSOCUG00000003892) #19 CASP6 (ENSOCUG00000034509) #22 ENSOCUG00000036219 SEC24B (ENSOCUG00000001284) #24 ENSOCUG00000031162 ENSOCUG00000035839 COL25A1 (ENSOCUG00000000201) #25 ETNPPL (ENSOCUG00000015610) #26 ENSOCUG00000011056 #27 ENSOCUG00000029357 ##28 ENSOCUG00000021006 ENSOCUG00000024066 LEF1 (ENSOCUG00000010436) #29 HADH (ENSOCUG00000014271) #30 CYP2U1 (ENSOCUG00000002281) #31 SGMS2 (ENSOCUG00000009998) #32 PAPSS1 (ENSOCUG00000004622) Pika MODERN SPECIES 445 ENSOPRG00000017047 #22 MCUB (ENSOPRG00000017044) #23 Tree shrew MODERN SPECIES 1884 CASP6 (ENSTBEG00000017037) #22