Clupeocephala	ANCESTRAL SPECIES	127								ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00940000154716.hc ##15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.b.a ##25	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.b ##37	ENSGT00940000171931	ENSGT00940000168219	ENSGT00940000166691	ENSGT00940000159107.i	ENSGT00530000063948.a	ENSGT00940000154489.B.a	ENSGT00950000183065.B.f
Euteleosteomorpha	ANCESTRAL SPECIES	40	ENSGT00940000178110 #7	ENSGT01030000234973 #8	ENSGT00940000157432.A #9	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000154947.k #13	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000164936.a #18	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.b.a ##25	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00960000187253	ENSGT00940000165795 #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35
Acanthomorphata	ANCESTRAL SPECIES	22	ENSGT00940000178110 #7	ENSGT01030000234973 #8	ENSGT00940000157432.A #9	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000154947.k #13	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000164936.a #18	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.a #37
Euacanthomorphacea	ANCESTRAL SPECIES		ENSGT01030000234973 #8	ENSGT00940000157432.A #9	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00940000154716.hc ##15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.a #37
Percomorphaceae	ANCESTRAL SPECIES	10	ENSGT00940000167191	ENSGT00940000170307	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00940000154716.hc ##15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.a #37
Percomorphaceae_B	ANCESTRAL SPECIES	15	ENSGT00940000170307	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT00880000138402	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00940000154716.hc ##15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.a #37
Ovalentaria	ANCESTRAL SPECIES	12	ENSGT00940000170307	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT00880000138402	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00940000154716.hc ##15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.a #37
Ovalentaria_B	ANCESTRAL SPECIES	15	ENSGT00390000017671.a.a	ENSGT00940000157432.A #9	ENSGT00940000170307	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.a #37
Pomacentridae	ANCESTRAL SPECIES	7	ENSGT00390000017671.a.a	ENSGT00940000157432.A #9	ENSGT00940000170307	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.a #37
Bicolor damselfish	MODERN SPECIES	242	SLC4A7 (ENSSPAG00000003896)	HERPUD2 (ENSSPAG00000003878)	ADGRB1 (ENSSPAG00000003823) #9	ENSSPAG00000003800 #10	hnrnpr (ENSSPAG00000003788) #11	dnajc8 (ENSSPAG00000003762) #12	ENSSPAG00000003731	clk2a (ENSSPAG00000003707) #13	cers2a (ENSSPAG00000003653) #14	celf3a (ENSSPAG00000003615) #15	rprd2a (ENSSPAG00000003596) #16	ciarta (ENSSPAG00000003560) #17	mrps21 (ENSSPAG00000003551) #19	crabp2b (ENSSPAG00000003533) #20	scamp3 (ENSSPAG00000003521) #21	RNF115 (ENSSPAG00000003481) #22	ash1l (ENSSPAG00000003361) #23	lrrc71 (ENSSPAG00000003318) #24	ENSSPAG00000003305 #25	ENSSPAG00000002752 #26	chrna11 (ENSSPAG00000002685) #27	snx27a (ENSSPAG00000002624) #28	ENSSPAG00000002612	s100a10a (ENSSPAG00000002605) #30
Pomacentridae_A	ANCESTRAL SPECIES	37	ENSGT00390000017671.a.a	ENSGT00940000157432.A #9	ENSGT00940000170307	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT01100000264401	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36
Amphiprion	ANCESTRAL SPECIES	91								ENSGT00940000154947.k #13	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00940000162871.i	ENSGT00940000165795.d #30	ENSGT01100000264401	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36
Orange clownfish	MODERN SPECIES	8	trim46b (ENSAPEG00000008418) #31	ENSAPEG00000008465	s100a10a (ENSAPEG00000008476) #30	ENSAPEG00000008482	snx27a (ENSAPEG00000008493) #28	chrna11 (ENSAPEG00000008561) #27	ENSAPEG00000008592 #27	clk2a (ENSAPEG00000008626) #13	cers2a (ENSAPEG00000008672) #14	celf3a (ENSAPEG00000008728) #15	rprd2a (ENSAPEG00000008782) #16	ciarta (ENSAPEG00000008798) #17	mrps21 (ENSAPEG00000008831) #19	crabp2b (ENSAPEG00000008837) #20	scamp3 (ENSAPEG00000008897) #21	ENSAPEG00000008910 #22	ash1l (ENSAPEG00000008936) #23	ENSAPEG00000008974 #25	ENSAPEG00000008994 #26	scamp3 (ENSAPEG00000009017) #21	crabp2b (ENSAPEG00000009060) #20	mrps21 (ENSAPEG00000009088) #19	ciarta (ENSAPEG00000009095) #17	ENSAPEG00000009175	dnajc8 (ENSAPEG00000009128) #12	hnrnpr (ENSAPEG00000009187) #11	ENSAPEG00000009230 #10	ENSAPEG00000009243	ADGRB1 (ENSAPEG00000009268) #9	ENSAPEG00000009369	SLC4A7 (ENSAPEG00000009392)
Clown anemonefish	MODERN SPECIES	1065						TYMP (ENSAOCG00000013905)	lsm8 (ENSAOCG00000013926)	grip1 (ENSAOCG00000014019)	ENSAOCG00000000892	cand1 (ENSAOCG00000000921)	ENSAOCG00000014188 #16	ciarta (ENSAOCG00000014201) #17	mrps21 (ENSAOCG00000014214) #19	crabp2b (ENSAOCG00000014237) #20	scamp3 (ENSAOCG00000014254) #21	ENSAOCG00000014280 #22	ash1l (ENSAOCG00000014299) #23	ENSAOCG00000014327	myof (ENSAOCG00000014674)	aarsd1 (ENSAOCG00000014735)	ptges3l (ENSAOCG00000014828)	kat7b (ENSAOCG00000014886)	ENSAOCG00000014899	dlx4b (ENSAOCG00000014952)	dlx3b (ENSAOCG00000014963)	itga3b (ENSAOCG00000002539)	ENSAOCG00000015119	ENSAOCG00000015178	inab (ENSAOCG00000001059)	atp5md (ENSAOCG00000015202)	taf5 (ENSAOCG00000001060)
Spiny chromis	MODERN SPECIES	392	SLC4A7 (ENSAPOG00000006779)	HERPUD2 (ENSAPOG00000006655)	ADGRB1 (ENSAPOG00000006630) #9	ENSAPOG00000006386 #10	hnrnpr (ENSAPOG00000006236) #11	dnajc8 (ENSAPOG00000000170) #12	ENSAPOG00000006141	clk2a (ENSAPOG00000006118) #13	cers2a (ENSAPOG00000000162) #14	celf3a (ENSAPOG00000006015) #15	rprd2a (ENSAPOG00000005936) #16	ciarta (ENSAPOG00000001032) #17	mrps21 (ENSAPOG00000005886) #19	crabp2b (ENSAPOG00000005873) #20	scamp3 (ENSAPOG00000005851) #21	ENSAPOG00000005830 #22	ash1l (ENSAPOG00000005745) #23	lrrc71 (ENSAPOG00000005692) #24	ENSAPOG00000005670 #25	ENSAPOG00000005636 ##26	chrna11 (ENSAPOG00000005631) #27	snx27a (ENSAPOG00000005588) #28	icn (ENSAPOG00000005546) #29	s100a10a (ENSAPOG00000005537) #30	ENSAPOG00000005528	ENSAPOG00000005518	trim46b (ENSAPOG00000005472) #31	dpm3 (ENSAPOG00000005415) #32	efna1a (ENSAPOG00000005375) #33
Cichlidae	ANCESTRAL SPECIES	7	ENSGT00940000157045.b	ENSGT00390000017671.a.a	ENSGT00940000157432.A #9	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.a #37
Pseudocrenilabrinae	ANCESTRAL SPECIES	12	ENSGT00940000157432.A #9	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00940000154716.hc ##15	ENSGT00940000177218	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.a #37
Nile tilapia	MODERN SPECIES	13	HERPUD2 (ENSONIG00000019688)	ENSONIG00000032661	ADGRB1 (ENSONIG00000019689) #9	ENSONIG00000019691 #10	hnrnpr (ENSONIG00000019692) #11	dnajc8 (ENSONIG00000019696) #12	ENSONIG00000036389	clk2a (ENSONIG00000019698) #13	cers2a (ENSONIG00000019701) #14	celf3a (ENSONIG00000019703) #15	rprd2a (ENSONIG00000019704) #16	ciarta (ENSONIG00000019706) #17	mrps21 (ENSONIG00000031832) #19	crabp2b (ENSONIG00000019709) #20	scamp3 (ENSONIG00000019710) #21	ENSONIG00000019713 #22	ash1l (ENSONIG00000019716) #23	lrrc71 (ENSONIG00000028356) #24	ENSONIG00000019717 #26	chrna11 (ENSONIG00000019719) #27	snx27a (ENSONIG00000019721) #28	ENSONIG00000038772 #29	ENSONIG00000028947 #29	s100a10a (ENSONIG00000031982) #30	trim46b (ENSONIG00000019724) #31	dpm3 (ENSONIG00000027309) #32	efna1a (ENSONIG00000038657) #33	ENSONIG00000032139 #34	cks1b (ENSONIG00000027098) #35	ENSONIG00000019730 #36	ENSONIG00000032250 #37
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	9	ENSGT00940000157432.A #9	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00940000154716.hc ##15	ENSGT00940000177218	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.a #37
Haplochromini	ANCESTRAL SPECIES	5	ENSGT00390000017671.a.a	ENSGT01030000234973 #8	ENSGT00940000157432.A #9	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.a #37
Burton s mouthbrooder	MODERN SPECIES	357	SLC4A7 (ENSHBUG00000019916)	HERPUD2 (ENSHBUG00000019940)	ADGRB1 (ENSHBUG00000019965) #9	ENSHBUG00000019981 #10	hnrnpr (ENSHBUG00000019998) #11	dnajc8 (ENSHBUG00000020035) #12	ENSHBUG00000020068	clk2a (ENSHBUG00000020081) #13	cers2a (ENSHBUG00000020099) #14	celf3a (ENSHBUG00000001061) #15	rprd2a (ENSHBUG00000020156) #16	ciarta (ENSHBUG00000020170) #17	mrps21 (ENSHBUG00000020177) #19	crabp2b (ENSHBUG00000020191) #20	scamp3 (ENSHBUG00000000613) #21	ENSHBUG00000000618 #22	ash1l (ENSHBUG00000020326) #23	lrrc71 (ENSHBUG00000020371) #24	ENSHBUG00000020403 ##25	ENSHBUG00000020523 #26	chrna11 (ENSHBUG00000020580) #27	snx27a (ENSHBUG00000000631) #28	ENSHBUG00000020641 #29	ENSHBUG00000020643 #29	s100a10a (ENSHBUG00000020650) #30	trim46b (ENSHBUG00000020692) #31	dpm3 (ENSHBUG00000020711) #32	efna1a (ENSHBUG00000020735) #33	ENSHBUG00000020740 #34	cks1b (ENSHBUG00000020757) #35	ENSHBUG00000020772 #36
Haplochromini_A	ANCESTRAL SPECIES	5	ENSGT00390000017671.a.a	ENSGT01030000234973 #8	ENSGT00940000157432.A #9	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.a #37
Haplochromini_B	ANCESTRAL SPECIES	1	ENSGT00390000017671.a.a	ENSGT01030000234973 #8	ENSGT00940000157432.A #9	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.a #37	ENSGT00940000168219
Zebra mbuna	MODERN SPECIES	1104	HERPUD2 (ENSMZEG00005026483)	ENSMZEG00005026485 #8	ADGRB1 (ENSMZEG00005026487) #9	ENSMZEG00005026488 #10	hnrnpr (ENSMZEG00005026489) #11	dnajc8 (ENSMZEG00005026491) #12	ENSMZEG00005026493	clk2a (ENSMZEG00005026495) #13	cers2a (ENSMZEG00005026498) #14	celf3a (ENSMZEG00005026501) #15	rprd2a (ENSMZEG00005026505) #16	ciarta (ENSMZEG00005026507) #17	mrps21 (ENSMZEG00005026509) #19	crabp2b (ENSMZEG00005026511) #20	scamp3 (ENSMZEG00005026512) #21	ENSMZEG00005026514 #22	ash1l (ENSMZEG00005026516) #23	ENSMZEG00005026520 #26	ENSMZEG00005026524 #25	chrna11 (ENSMZEG00005026530) #27	snx27a (ENSMZEG00005026536) #28	ENSMZEG00005026538 #29	ENSMZEG00005026540 #29	s100a10a (ENSMZEG00005026541) #30	trim46b (ENSMZEG00005026543) #31	dpm3 (ENSMZEG00005026545) #32	efna1a (ENSMZEG00005026547) #33	ENSMZEG00005026548 #34	cks1b (ENSMZEG00005026550) #35	ENSMZEG00005026551 #36	ENSMZEG00005026555 #37
Eastern happy	MODERN SPECIES	13	HERPUD2 (ENSACLG00000009278)	ADGRB1 (ENSACLG00000009396) #9	ENSACLG00000009509 #10	hnrnpr (ENSACLG00000009513) #11	ENSACLG00000009533	ENSACLG00000009541	ENSACLG00000009563	clk2a (ENSACLG00000009581) #13	cers2a (ENSACLG00000009603) #14	celf3a (ENSACLG00000009631) #15	ENSACLG00000009641	ciarta (ENSACLG00000009644) #17	mrps21 (ENSACLG00000009659) #19	crabp2b (ENSACLG00000009662) #20	scamp3 (ENSACLG00000009677) #21	ENSACLG00000009685 #22	ash1l (ENSACLG00000009699) #23	ENSACLG00000009727 #26	ENSACLG00000009839 #25	chrna11 (ENSACLG00000009856) #27	ENSACLG00000009864	snx27a (ENSACLG00000009901) #28	ENSACLG00000009936 #29	ENSACLG00000009942 #29	s100a10a (ENSACLG00000009958) #30	trim46b (ENSACLG00000009963) #31	dpm3 (ENSACLG00000009972) #32	efna1a (ENSACLG00000009980) #33	ENSACLG00000009983	ENSACLG00000009992 #34	SHE (ENSACLG00000010028)
P. nyererei	MODERN SPECIES	397	SLC4A7 (ENSPNYG00000012457)	HERPUD2 (ENSPNYG00000012415)	ADGRB1 (ENSPNYG00000012249) #9	ENSPNYG00000012202 #10	hnrnpr (ENSPNYG00000012138) #11	dnajc8 (ENSPNYG00000012076) #12	ENSPNYG00000012049	clk2a (ENSPNYG00000011683) #13	cers2a (ENSPNYG00000011548) #14	celf3a (ENSPNYG00000011518) #15	rprd2a (ENSPNYG00000011501) #16	ciarta (ENSPNYG00000011473) #17	mrps21 (ENSPNYG00000011464) #19	crabp2b (ENSPNYG00000011450) #20	scamp3 (ENSPNYG00000011437) #21	ENSPNYG00000011388 #22	ash1l (ENSPNYG00000011349) #23	lrrc71 (ENSPNYG00000011319) #24	ENSPNYG00000011291 #25	ENSPNYG00000011109 #26	chrna11 (ENSPNYG00000011046) #27	snx27a (ENSPNYG00000011002) #28	ENSPNYG00000010908 #29	ENSPNYG00000010893 #29	s100a10a (ENSPNYG00000010880) #30	trim46b (ENSPNYG00000010844) #31	dpm3 (ENSPNYG00000010826) #32	efna1a (ENSPNYG00000010806) #33	ENSPNYG00000010787 #34	cks1b (ENSPNYG00000010772) #35	ENSPNYG00000010753 #36
Lyretail cichlid	MODERN SPECIES	302	ENSNBRG00000017941 #8	ENSNBRG00000017909 #9	ENSNBRG00000017899 #10	hnrnpr (ENSNBRG00000017879) #11	dnajc8 (ENSNBRG00000017850) #12	ENSNBRG00000017827	clk2a (ENSNBRG00000017651) #13	cers2a (ENSNBRG00000017582) #14	celf3a (ENSNBRG00000017554) #15	ENSNBRG00000017540 ##15	ENSNBRG00000017527	ciarta (ENSNBRG00000017511) #17	mrps21 (ENSNBRG00000017499) #19	crabp2b (ENSNBRG00000017363) #20	scamp3 (ENSNBRG00000017335) #21	ENSNBRG00000017283 #22	ash1l (ENSNBRG00000017174) #23	lrrc71 (ENSNBRG00000017131) #24	ENSNBRG00000017009 #25	ENSNBRG00000016931 #26	chrna11 (ENSNBRG00000016828) #27	snx27a (ENSNBRG00000016773) #28	ENSNBRG00000016749 #29	ENSNBRG00000016739 #29	s100a10a (ENSNBRG00000016655) #30	trim46b (ENSNBRG00000016613) #31	dpm3 (ENSNBRG00000016594) #32	efna1a (ENSNBRG00000016557) #33	ENSNBRG00000016520 #34	cks1b (ENSNBRG00000016502) #35	ENSNBRG00000016435 #36
Midas cichlid	MODERN SPECIES	708			ADGRB1 (ENSACIG00000010640) #9	ENSACIG00000010696 #10	hnrnpr (ENSACIG00000010706) #11	ENSACIG00000010728	ENSACIG00000010745	clk2a (ENSACIG00000010767) #13	cers2a (ENSACIG00000010881) #14	celf3a (ENSACIG00000010932) #15	ENSACIG00000010965 #16	ciarta (ENSACIG00000010998) #17	mrps21 (ENSACIG00000011012) #19	crabp2b (ENSACIG00000011022) #20	scamp3 (ENSACIG00000011043) #21	ENSACIG00000011069 #22	ash1l (ENSACIG00000011095) #23	lrrc71 (ENSACIG00000011144) #24	ENSACIG00000011177 #25	ENSACIG00000011189 #26	chrna11 (ENSACIG00000011268) #27
Atherinomorphae	ANCESTRAL SPECIES	12	ENSGT01030000234973.b #8	ENSGT00940000157432.A #9	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT00880000138402	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.a #37
Cyprinodontiformes	ANCESTRAL SPECIES	10	ENSGT00390000017671.a.a	ENSGT00940000157432.A #9	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT00880000138402	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.a #37
Aplocheiloidei	ANCESTRAL SPECIES	9	ENSGT00940000158728.k	ENSGT00940000157045.b	ENSGT00390000017671.a.a	ENSGT00940000157432.A #9	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000154947.k #13	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.a #37	ENSGT00940000168219
Turquoise killifish	MODERN SPECIES	1628	dpm3 (ENSNFUG00015020781) #32	trim46b (ENSNFUG00015020774) #31	ENSNFUG00015020771 #30	S100A2 (ENSNFUG00015020767) #29	SNX27A (ENSNFUG00015020015) #28	Nfu_g_1_017837 (ENSNFUG00015019925) #27	ENSNFUG00015019877 #26	ENSNFUG00015019823 #25	cers2a (ENSNFUG00015019804) #14	celf3a (ENSNFUG00015019695) #15	RPRD2A (ENSNFUG00015019643) #16	C19H1ORF51 (ENSNFUG00015019628) #17	mrps21 (ENSNFUG00015019622) #19	CRABP2B (ENSNFUG00015019620) #20	SCAMP3 (ENSNFUG00015019613) #21	ENSNFUG00015019604 #22	ash1l (ENSNFUG00015019553) #23	lrrc71 (ENSNFUG00015019525) #24	ENSNFUG00015019511	clk2a (ENSNFUG00015017431) #13	DNAJC8 (ENSNFUG00015017303) #12	ENSNFUG00015017293	hnrnpr (ENSNFUG00015017206) #11	ATPIF1A (ENSNFUG00015017174) #10	ENSNFUG00015017169	BAI1 (ENSNFUG00015016730) #9	HERPUD2 (ENSNFUG00015016703)	SLC4A7 (ENSNFUG00015015776)	EOMESA (ENSNFUG00015015647)	ENSNFUG00015015151	TGFBR2 (ENSNFUG00015015040)
Mangrove rivulus	MODERN SPECIES	2	TGFBR2 (ENSKMAG00000012650)	ENSKMAG00000012586	eomesa (ENSKMAG00000012496)	SLC4A7 (ENSKMAG00000012350)	HERPUD2 (ENSKMAG00000012304)	ADGRB1 (ENSKMAG00000012221) #9	hnrnpr (ENSKMAG00000012139) #11	clk2a (ENSKMAG00000012074) #13	cers2a (ENSKMAG00000012043) #14	celf3a (ENSKMAG00000011999) #15	rprd2a (ENSKMAG00000011981) #16	ciarta (ENSKMAG00000011969) #17	mrps21 (ENSKMAG00000011957) #19	crabp2b (ENSKMAG00000011938) #20	scamp3 (ENSKMAG00000011904) #21	ENSKMAG00000011862 #22	ash1l (ENSKMAG00000011776) #23	lrrc71 (ENSKMAG00000011716) #24	ENSKMAG00000011647 #25	ENSKMAG00000011606 #26	chrna11 (ENSKMAG00000011541) #27	snx27a (ENSKMAG00000011486) #28	icn (ENSKMAG00000011467) #29	s100a10a (ENSKMAG00000011450) #30	trim46b (ENSKMAG00000011413) #31	dpm3 (ENSKMAG00000011399) #32	efna1a (ENSKMAG00000011385) #33	ENSKMAG00000011369 #34	cks1b (ENSKMAG00000011353) #35	ENSKMAG00000011336 #36	ENSKMAG00000011320 #37
Cyprinodontoidei	ANCESTRAL SPECIES	11	ENSGT00390000017671.a.a	ENSGT00940000157432.A #9	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT00880000138402	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.a #37
NAME_4	ANCESTRAL SPECIES	10		ENSGT01030000234973.b #8	ENSGT00940000157432.A #9	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.a #37
Mummichog	MODERN SPECIES	2348		ENSFHEG00000012679 #8	ADGRB1 (ENSFHEG00000012665) #9	ENSFHEG00000012618 #10	hnrnpr (ENSFHEG00000012603) #11	dnajc8 (ENSFHEG00000012569) #12	clk2a (ENSFHEG00000012546) #13	cers2a (ENSFHEG00000012539) #14	celf3a (ENSFHEG00000012530) #15	ENSFHEG00000012503	ENSFHEG00000012493 #16	ciarta (ENSFHEG00000012441) #17	mrps21 (ENSFHEG00000012430) #19	crabp2b (ENSFHEG00000012423) #20	scamp3 (ENSFHEG00000012403) #21	ENSFHEG00000012370 #22	ash1l (ENSFHEG00000012308) #23	ENSFHEG00000012228	ENSFHEG00000012201 #25	ENSFHEG00000011989 #26	chrna11 (ENSFHEG00000011932) #27	snx27a (ENSFHEG00000011889) #28	icn2 (ENSFHEG00000011845) #29	s100a10a (ENSFHEG00000011839) #30	ENSFHEG00000011834	trim46b (ENSFHEG00000011810) #31	dpm3 (ENSFHEG00000011770) #32	efna1a (ENSFHEG00000011761) #33	ENSFHEG00000000265 #34	cks1b (ENSFHEG00000011707) #35	ENSFHEG00000011689 #36
Sheepshead minnow	MODERN SPECIES	203	THBS1 (ENSCVAG00000018367)	ADGRB1 (ENSCVAG00000018336) #9	ENSCVAG00000018316 #10	hnrnpr (ENSCVAG00000018291) #11	hnrnpr (ENSCVAG00000018246) #11	dnajc8 (ENSCVAG00000018231) #12	ENSCVAG00000018184	clk2a (ENSCVAG00000018175) #13	cers2a (ENSCVAG00000018116) #14	celf3a (ENSCVAG00000018056) #15	rprd2a (ENSCVAG00000018006) #16	ciarta (ENSCVAG00000017992) #17	mrps21 (ENSCVAG00000017982) #19	crabp2b (ENSCVAG00000017975) #20	scamp3 (ENSCVAG00000017946) #21	ENSCVAG00000017930 #22	ash1l (ENSCVAG00000017872) #23	lrrc71 (ENSCVAG00000017850) #24	ENSCVAG00000017817 #25	ENSCVAG00000017788 #26	chrna11 (ENSCVAG00000017748) #27	snx27a (ENSCVAG00000017700) #28	icn (ENSCVAG00000017622) #29	s100a10a (ENSCVAG00000017616) #30	trim46b (ENSCVAG00000017607) #31	dpm3 (ENSCVAG00000017572) #32	efna1a (ENSCVAG00000017560) #33	ENSCVAG00000017556 #34	cks1b (ENSCVAG00000017551) #35	ENSCVAG00000000772 #36	ENSCVAG00000017519 #37
Poeciliinae	ANCESTRAL SPECIES	18	ENSGT00390000017671.a.a	ENSGT00940000157432.A #9	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT00880000138402	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.a #37
Poecilia	ANCESTRAL SPECIES	55	ENSGT00940000157432.A #9	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT00880000138402	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00980000200353	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00940000155363.w	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36
NAME_6	ANCESTRAL SPECIES	128	ENSGT00940000157432.A #9	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT00880000138402	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00980000200353	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00940000173967	ENSGT00940000155363.w	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36
Sailfin molly	MODERN SPECIES	669										ENSPLAG00000019426 ##15	rprd2a (ENSPLAG00000019420) #16	ciarta (ENSPLAG00000019407) #17	mrps21 (ENSPLAG00000019397) #19	crabp2b (ENSPLAG00000019392) #20	scamp3 (ENSPLAG00000019376) #21	ENSPLAG00000019370 #22	ash1l (ENSPLAG00000019341) #23	ENSPLAG00000019266 #25	ENSPLAG00000019241 #26	chrna11 (ENSPLAG00000019192) #27	SNX27 (ENSPLAG00000019158) #28	icn2 (ENSPLAG00000019125) #29	s100a10a (ENSPLAG00000019110) #30	trim46b (ENSPLAG00000019105) #31
Amazon molly	MODERN SPECIES	377	HERPUD2 (ENSPFOG00000007443)	ADGRB1 (ENSPFOG00000007532) #9	ENSPFOG00000007873	hnrnpr (ENSPFOG00000007881) #11	dnajc8 (ENSPFOG00000007962) #12	clk2a (ENSPFOG00000008036) #13	ENSPFOG00000008168	ENSPFOG00000008178	cers2a (ENSPFOG00000008203) #14	celf3a (ENSPFOG00000008507) #15	rprd2a (ENSPFOG00000008634) #16	ciarta (ENSPFOG00000008690) #17	mrps21 (ENSPFOG00000008722) #19	crabp2b (ENSPFOG00000008725) #20	scamp3 (ENSPFOG00000008731) #21	ENSPFOG00000008821 #22	ash1l (ENSPFOG00000008852) #23	ENSPFOG00000023082	ENSPFOG00000009008 #25	ENSPFOG00000009016 #26	chrna11 (ENSPFOG00000009080) #27	SNX27 (ENSPFOG00000009276) #28	icn2 (ENSPFOG00000009398) #29	ENSPFOG00000009404 #30	trim46b (ENSPFOG00000009422) #31	dpm3 (ENSPFOG00000009593) #32	efna1a (ENSPFOG00000009606) #33	ENSPFOG00000009661	ENSPFOG00000009675 #34	cks1b (ENSPFOG00000009707) #35	ENSPFOG00000009734 #36
Guppy	MODERN SPECIES	441	ADGRB1 (ENSPREG00000018569) #9	ENSPREG00000018645 #10	hnrnpr (ENSPREG00000018754) #11	dnajc8 (ENSPREG00000018781) #12	ENSPREG00000018798	clk2a (ENSPREG00000018819) #13	ENSPREG00000018849	cers2a (ENSPREG00000018868) #14	ENSPREG00000018888	celf3a (ENSPREG00000018923) #15	rprd2a (ENSPREG00000018979) #16	ciarta (ENSPREG00000018998) #17	mrps21 (ENSPREG00000019017) #19	crabp2b (ENSPREG00000019026) #20	scamp3 (ENSPREG00000019041) #21	ENSPREG00000019064 #22	ash1l (ENSPREG00000019101) #23	lrrc71 (ENSPREG00000019135) #24	ENSPREG00000019180 #25	ENSPREG00000019339 #26	chrna11 (ENSPREG00000019402) #27	SNX27 (ENSPREG00000019441) #28	icn2 (ENSPREG00000019482) #29	s100a10b (ENSPREG00000019496)	trim46b (ENSPREG00000019553) #31	dpm3 (ENSPREG00000019597) #32	efna1a (ENSPREG00000019616) #33	ENSPREG00000019632 #34	cks1b (ENSPREG00000019645) #35	ENSPREG00000019653 #36	ENSPREG00000019668 #37
Platyfish	MODERN SPECIES	4	HERPUD2 (ENSXMAG00000027325)	ADGRB1 (ENSXMAG00000014448) #9	ENSXMAG00000020284 #10	hnrnpr (ENSXMAG00000014480) #11	ENSXMAG00000020983	dnajc8 (ENSXMAG00000027978) #12	clk2a (ENSXMAG00000014567) #13	ENSXMAG00000026806	cers2a (ENSXMAG00000014591) #14	celf3a (ENSXMAG00000014619) #15	rprd2a (ENSXMAG00000014636) #16	ciarta (ENSXMAG00000022811) #17	mrps21 (ENSXMAG00000029139) #19	crabp2b (ENSXMAG00000014642) #20	scamp3 (ENSXMAG00000021817) #21	ENSXMAG00000014665 #22	ash1l (ENSXMAG00000014673) #23	lrrc71 (ENSXMAG00000014679) #24	ENSXMAG00000014681 #25	ENSXMAG00000014698 #26	chrna11 (ENSXMAG00000014725) #27	snx27a (ENSXMAG00000014739) #28	icn2 (ENSXMAG00000028927) #29	s100a10a (ENSXMAG00000014763) #30	trim46b (ENSXMAG00000027467) #31	dpm3 (ENSXMAG00000020287) #32	efna1a (ENSXMAG00000014802) #33	ENSXMAG00000029329	ENSXMAG00000025812 #34	cks1b (ENSXMAG00000023898) #35	ENSXMAG00000014816 #37
Percomorphaceae_C	ANCESTRAL SPECIES	15	ENSGT00940000167191	ENSGT00940000170307	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT00880000138402	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.a #37
Eupercaria	ANCESTRAL SPECIES	11	ENSGT00390000017671.a.a	ENSGT00940000157432.A #9	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT00880000138402	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.a #37
Eupecaria_A	ANCESTRAL SPECIES	12	ENSGT00390000017671.a.a	ENSGT00940000157432.A #9	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT00880000138402	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.a #37
Ballan wrasse	MODERN SPECIES	143	HERPUD2 (ENSLBEG00000027179)	ADGRB1 (ENSLBEG00000027108) #9	ENSLBEG00000027073 #10	hnrnpr (ENSLBEG00000027047) #11	dnajc8 (ENSLBEG00000027024) #12	ENSLBEG00000027008	clk2a (ENSLBEG00000026994) #13	ENSLBEG00000026986	cers2a (ENSLBEG00000026958) #14	celf3a (ENSLBEG00000026936) #15	ENSLBEG00000026924 #16	ciarta (ENSLBEG00000026913) #17	mrps21 (ENSLBEG00000026904) #19	crabp2b (ENSLBEG00000026897) #20	scamp3 (ENSLBEG00000026887) #21	ENSLBEG00000026874 #22	ash1l (ENSLBEG00000026843) #23	lrrc71 (ENSLBEG00000026819) #24	ENSLBEG00000026791 #25	ENSLBEG00000026760 #26	chrna11 (ENSLBEG00000026728) #27	snx27a (ENSLBEG00000026687) #28	icn (ENSLBEG00000026669) #29	s100a10a (ENSLBEG00000026661) #30	trim46b (ENSLBEG00000026639) #31	dpm3 (ENSLBEG00000026614) #32	efna1a (ENSLBEG00000026593) #33
Eupecaria_B	ANCESTRAL SPECIES	12	ENSGT00390000017671.a.a	ENSGT00940000157432.A #9	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT00880000138402	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.a #37
Perciformes	ANCESTRAL SPECIES	11	ENSGT00390000017671.a.a	ENSGT00940000157432.A #9	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT00880000138402	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.a #37
Cottioidei	ANCESTRAL SPECIES	16	ENSGT00390000017671.a.a	ENSGT00940000157432.A #9	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT00880000138402	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.a #37
Lumpfish	MODERN SPECIES	2	HERPUD2 (ENSCLMG00005014485)	ADGRB1 (ENSCLMG00005014489) #9	ENSCLMG00005014509 #10	hnrnpr (ENSCLMG00005014516) #11	dnajc8 (ENSCLMG00005014765) #12	ENSCLMG00005014771	clk2a (ENSCLMG00005014789) #13	ENSCLMG00005016125	cers2a (ENSCLMG00005016126) #14	celf3a (ENSCLMG00005016137) #15	rprd2a (ENSCLMG00005016141) #16	ciarta (ENSCLMG00005016145) #17	mrps21 (ENSCLMG00005016149) #19	crabp2b (ENSCLMG00005016151) #20	scamp3 (ENSCLMG00005016155) #21	ENSCLMG00005016157 #22	ash1l (ENSCLMG00005016162) #23	lrrc71 (ENSCLMG00005016509) #24	ENSCLMG00005016510 #25	ENSCLMG00005016513 #26	chrna11 (ENSCLMG00005016514) #27	snx27a (ENSCLMG00005016520) #28	icn (ENSCLMG00005016680) #29	ENSCLMG00005016682	trim46b (ENSCLMG00005016689) #31	dpm3 (ENSCLMG00005016864) #32	efna1a (ENSCLMG00005016866) #33	ENSCLMG00005016867 #34	cks1b (ENSCLMG00005016868) #35	ENSCLMG00005016869 #36	ENSCLMG00005016871 #37
Perciformes_a	ANCESTRAL SPECIES	14	ENSGT00940000157045.b	ENSGT00390000017671.a.a	ENSGT00940000157432.A #9	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.a #37
Pike perch	MODERN SPECIES	13	HERPUD2 (ENSSLUG00000011153)	ENSSLUG00000011159	ADGRB1 (ENSSLUG00000011168) #9	ENSSLUG00000011206 #10	hnrnpr (ENSSLUG00000011221) #11	dnajc8 (ENSSLUG00000011268) #12	ENSSLUG00000011294	clk2a (ENSSLUG00000011347) #13	cers2a (ENSSLUG00000012540) #14	celf3a (ENSSLUG00000012566) #15	ENSSLUG00000012582 #16	ciarta (ENSSLUG00000012589) #17	mrps21 (ENSSLUG00000012593) #19	crabp2b (ENSSLUG00000012599) #20	scamp3 (ENSSLUG00000012604) #21	ENSSLUG00000012608 #22	ash1l (ENSSLUG00000012622) #23	lrrc71 (ENSSLUG00000012776) #24	ENSSLUG00000012784 ##25	ENSSLUG00000012794 #26	chrna11 (ENSSLUG00000012824) #27	snx27a (ENSSLUG00000012852) #28	icn2 (ENSSLUG00000012896) #29	s100a10a (ENSSLUG00000012898) #30	trim46b (ENSSLUG00000012907) #31	dpm3 (ENSSLUG00000012919) #32	efna1a (ENSSLUG00000012923) #33	ENSSLUG00000012927 #34	cks1b (ENSSLUG00000012930) #35	ENSSLUG00000012935 #36	ENSSLUG00000012942 #37
Channel bull blenny	MODERN SPECIES	2	ADGRB1 (ENSCGOG00000011999) #9	ENSCGOG00000012147 #10	hnrnpr (ENSCGOG00000012155) #11	dnajc8 (ENSCGOG00000012271) #12	ENSCGOG00000012570	clk2a (ENSCGOG00000012582) #13	ENSCGOG00000013415	cers2a (ENSCGOG00000013441) #14	celf3a (ENSCGOG00000013635) #15	ENSCGOG00000014013 #16	ENSCGOG00000014015 #16	ciarta (ENSCGOG00000014018) #17	mrps21 (ENSCGOG00000014020) #19	crabp2b (ENSCGOG00000014022) #20	scamp3 (ENSCGOG00000014033) #21	ENSCGOG00000014048 #22	ash1l (ENSCGOG00000014064) #23	lrrc71 (ENSCGOG00000014125) #24	ENSCGOG00000014127 #25	ENSCGOG00000014140 #26	chrna11 (ENSCGOG00000014164) #27	SNX27 (ENSCGOG00000014175) #28	icn (ENSCGOG00000014241) #29	s100a10a (ENSCGOG00000014244) #30	trim46b (ENSCGOG00000014248) #31	dpm3 (ENSCGOG00000014257) #32	efna1a (ENSCGOG00000014260) #33	ENSCGOG00000014268 #34	ENSCGOG00000014271	cks1b (ENSCGOG00000014272) #35	ENSCGOG00000014295 #36
Eupecaria_C	ANCESTRAL SPECIES	13	ENSGT00390000017671.a.a	ENSGT00940000157432.A #9	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT00880000138402	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.a #37
Gilthead seabream	MODERN SPECIES	17	HERPUD2 (ENSSAUG00010020364)	ADGRB1 (ENSSAUG00010020372) #9	ENSSAUG00010020382 #10	hnrnpr (ENSSAUG00010020391) #11	dnajc8 (ENSSAUG00010004118) #12	ENSSAUG00010004240	clk2a (ENSSAUG00010004324) #13	ENSSAUG00010006251	cers2a (ENSSAUG00010006253) #14	celf3a (ENSSAUG00010006272) #15	ENSSAUG00010006362 #16	ciarta (ENSSAUG00010006367) #17	mrps21 (ENSSAUG00010006368) #19	crabp2b (ENSSAUG00010006370) #20	scamp3 (ENSSAUG00010006372) #21	ENSSAUG00010006374 #22	ash1l (ENSSAUG00010006384) #23	lrrc71 (ENSSAUG00010006921) #24	ENSSAUG00010006924 #25	ENSSAUG00010006932 #26	chrna11 (ENSSAUG00010006950) #27	SNX27 (ENSSAUG00010006968) #28	icn (ENSSAUG00010007211) #29	s100a10a (ENSSAUG00010007214) #30	trim46b (ENSSAUG00010007218) #31	dpm3 (ENSSAUG00010007413) #32	efna1a (ENSSAUG00010007414) #33	ENSSAUG00010007415 #34	ENSSAUG00010007418 #36	cks1b (ENSSAUG00010007420) #35	ENSSAUG00010007421 #37
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	10	ENSGT00940000157045.b	ENSGT00390000017671.a.a	ENSGT00940000157432.A #9	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.a #37
Large yellow croaker	MODERN SPECIES	484	SLC4A7 (ENSLCRG00005012289)	HERPUD2 (ENSLCRG00005018433)	ADGRB1 (ENSLCRG00005018476) #9	ENSLCRG00005018671 #10	hnrnpr (ENSLCRG00005018673) #11	dnajc8 (ENSLCRG00005018706) #12	ENSLCRG00005018719	clk2a (ENSLCRG00005018736) #13	cers2a (ENSLCRG00005018874) #14	celf3a (ENSLCRG00005018913) #15	rprd2a (ENSLCRG00005019043) #16	ciarta (ENSLCRG00005019073) #17	mrps21 (ENSLCRG00005019077) #19	crabp2b (ENSLCRG00005019080) #20	scamp3 (ENSLCRG00005019083) #21	rnf115b (ENSLCRG00005019098) #22	ash1l (ENSLCRG00005019160) #23	lrrc71 (ENSLCRG00005019971) #24	ENSLCRG00005019987 #25	ENSLCRG00005019996 #26	snx27a (ENSLCRG00005020029) #28	chrna11 (ENSLCRG00005020038) #27	ENSLCRG00005020041 #29	s100a10a (ENSLCRG00005020045) #30	trim46b (ENSLCRG00005020048) #31	dpm3 (ENSLCRG00005020077) #32	efna1a (ENSLCRG00005020081) #33	ENSLCRG00005020085 #34	cks1b (ENSLCRG00005020090) #35	ENSLCRG00005020094 #36	ENSLCRG00005020103 #37
Tetraodontidae	ANCESTRAL SPECIES	60										ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000177151	ENSGT00940000168219
Fugu	MODERN SPECIES	3	ENSTRUG00000027682	cndp2 (ENSTRUG00000012921)	ENSTRUG00000026302	ENSTRUG00000012739	SCRT1 (ENSTRUG00000012719)	ENSTRUG00000031799	zgc:63863 (ENSTRUG00000012626)	dgat1a (ENSTRUG00000012581)	cfap20 (ENSTRUG00000026308)	cers2a (ENSTRUG00000012292) #14	celf3a (ENSTRUG00000012064) #15	rprd2a (ENSTRUG00000012016) #16	mrps21 (ENSTRUG00000022345) #19	crabp2b (ENSTRUG00000011951) #20	scamp3 (ENSTRUG00000011701) #21	ENSTRUG00000011671 #22	ash1l (ENSTRUG00000022988) #23	lrrc71 (ENSTRUG00000032494) #24	ENSTRUG00000029647 #25	ENSTRUG00000019576 #26	chrna11 (ENSTRUG00000011358) #27	snx27a (ENSTRUG00000011162) #28	icn (ENSTRUG00000019629) #29	s100a10a (ENSTRUG00000011151) #30	trim46b (ENSTRUG00000010910) #31	s100a10a (ENSTRUG00000011111) #30	dpm3 (ENSTRUG00000010902) #32	efna1a (ENSTRUG00000010820) #33	ENSTRUG00000010789 #34	cks1b (ENSTRUG00000029865) #35	ENSTRUG00000025884 #36
Tetraodon	MODERN SPECIES	16	cyp51 (ENSTNIG00000017535)	ENSTNIG00000017536	dus3l (ENSTNIG00000017537)	cndp2 (ENSTNIG00000017538)	RECQL4 (ENSTNIG00000017539)	SLC39A4 (ENSTNIG00000017540)	ENSTNIG00000017541	zgc:63863 (ENSTNIG00000017542)	dgat1a (ENSTNIG00000017543)	cfap20 (ENSTNIG00000017544)	cers2a (ENSTNIG00000017545) #14	celf3a (ENSTNIG00000017546) #15	ENSTNIG00000017547 #16	crabp2b (ENSTNIG00000017548) #20	scamp3 (ENSTNIG00000017549) #21	ENSTNIG00000000111 #22	ash1l (ENSTNIG00000017550) #23	ENSTNIG00000017551 #25	ENSTNIG00000017552 #26	chrna11 (ENSTNIG00000017553) #27	snx27a (ENSTNIG00000017554) #28	ENSTNIG00000017555	s100a10a (ENSTNIG00000017556) #30	trim46b (ENSTNIG00000017557) #31	dpm3 (ENSTNIG00000001321) #32	efna1a (ENSTNIG00000017558) #33	ENSTNIG00000017559 #34	ENSTNIG00000017560 #37	s100s (ENSTNIG00000017561)	SHE (ENSTNIG00000017562)	pygo2 (ENSTNIG00000017563)
Percomorphaceae_D	ANCESTRAL SPECIES	14	ENSGT00390000017671.a.a	ENSGT00940000157432.A #9	ENSGT00940000170307	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.a #37
Anabantaria	ANCESTRAL SPECIES	16	ENSGT00940000157045.b	ENSGT00390000017671.a.a	ENSGT00940000157432.A #9	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.a #37
Anabantoidei	ANCESTRAL SPECIES	19	ENSGT00940000157045.b	ENSGT00390000017671.a.a	ENSGT00940000157432.A #9	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.a #37
Climbing perch	MODERN SPECIES	2	ENSATEG00000008509	ENSATEG00000008564	ENSATEG00000008582 #9	ENSATEG00000008686 #10	ENSATEG00000008698 #11	dnajc8 (ENSATEG00000008750) #12	ENSATEG00000008798	ENSATEG00000008818 #13	cers2a (ENSATEG00000008841) #14	celf3a (ENSATEG00000008884) #15	rprd2a (ENSATEG00000008913) #16	ciarta (ENSATEG00000028086) #17	mrps21 (ENSATEG00000025909) #19	crabp2b (ENSATEG00000008948) #20	scamp3 (ENSATEG00000008964) #21	ENSATEG00000008972 #22	ash1l (ENSATEG00000009017) #23	lrrc71 (ENSATEG00000027205) #24	ENSATEG00000009100 #25	ENSATEG00000009118 #26	ENSATEG00000009317 #27	ENSATEG00000009350 #28	ENSATEG00000009392 #29	ENSATEG00000009397 #30	trim46b (ENSATEG00000009408) #31	dpm3 (ENSATEG00000009449) #32	efna1a (ENSATEG00000009466) #33	ENSATEG00000009499 #34	ENSATEG00000009515 #35	ENSATEG00000009526 #36	ENSATEG00000026985 #37
Siamese fighting fish	MODERN SPECIES	2	eomesa (ENSBSLG00000009601)	SLC4A7 (ENSBSLG00000009041)	HERPUD2 (ENSBSLG00000008702)	ADGRB1 (ENSBSLG00000008325) #9	hnrnpr (ENSBSLG00000016539) #11	dnajc8 (ENSBSLG00000016525) #12	ENSBSLG00000016518	clk2a (ENSBSLG00000016387) #13	cers2a (ENSBSLG00000016364) #14	celf3a (ENSBSLG00000016315) #15	rprd2a (ENSBSLG00000016309) #16	ciarta (ENSBSLG00000016305) #17	mrps21 (ENSBSLG00000016301) #19	crabp2b (ENSBSLG00000016298) #20	scamp3 (ENSBSLG00000016290) #21	ENSBSLG00000016284 #22	ash1l (ENSBSLG00000016270) #23	lrrc71 (ENSBSLG00000016260) #24	ENSBSLG00000016255 #25	ENSBSLG00000016250 #26	chrna11 (ENSBSLG00000016192) #27	snx27a (ENSBSLG00000016097) #28	ENSBSLG00000016079	s100a10b (ENSBSLG00000016077)	trim46b (ENSBSLG00000016069) #31	dpm3 (ENSBSLG00000016066) #32	efna1a (ENSBSLG00000016065) #33	ENSBSLG00000016062 #34	cks1b (ENSBSLG00000016050) #35	ENSBSLG00000016041 #36	ENSBSLG00000016034 #37
Zig-zag eel	MODERN SPECIES	2	ENSMAMG00000002146	ENSMAMG00000001990	ENSMAMG00000025183	ENSMAMG00000001861 #9	ENSMAMG00000001632 #11	dnajc8 (ENSMAMG00000001592) #12	ENSMAMG00000001581	ENSMAMG00000001543 #13	cers2a (ENSMAMG00000001488) #14	celf3a (ENSMAMG00000001436) #15	rprd2a (ENSMAMG00000001402) #16	ciarta (ENSMAMG00000027139) #17	mrps21 (ENSMAMG00000025689) #19	crabp2b (ENSMAMG00000001364) #20	scamp3 (ENSMAMG00000001304) #21	ENSMAMG00000001258 #22	ENSMAMG00000001205	ENSMAMG00000001166 #25	ENSMAMG00000000628 #26	ENSMAMG00000000580 #27	snx27a (ENSMAMG00000000511) #28	ENSMAMG00000027096 #29	s100a10a (ENSMAMG00000000471) #30	trim46b (ENSMAMG00000000378) #31	dpm3 (ENSMAMG00000016864) #32	efna1a (ENSMAMG00000016844) #33	ENSMAMG00000016832 #34	cks1b (ENSMAMG00000026635) #35	ENSMAMG00000016808 #36	ENSMAMG00000024973 #37	ENSMAMG00000024745
Carangaria	ANCESTRAL SPECIES	14	ENSGT00390000017671.a.a	ENSGT00940000157432.A #9	ENSGT00940000170307	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.a #37
Carangaria_A	ANCESTRAL SPECIES	16	ENSGT00390000017671.a.a	ENSGT00940000157432.A #9	ENSGT00940000170307	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.b.a ##25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.a #37
Seriola	ANCESTRAL SPECIES	12	ENSGT00390000017671.a.a	ENSGT00940000157432.A #9	ENSGT00940000170307	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.b.a ##25	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36
Greater amberjack	MODERN SPECIES	48	SLC4A7 (ENSSDUG00000019230)	HERPUD2 (ENSSDUG00000019210)	ADGRB1 (ENSSDUG00000018991) #9	ENSSDUG00000018906 #10	hnrnpr (ENSSDUG00000018866) #11	dnajc8 (ENSSDUG00000018809) #12	ENSSDUG00000018794	clk2a (ENSSDUG00000018771) #13	cers2a (ENSSDUG00000018716) #14	celf3a (ENSSDUG00000018695) #15	rprd2a (ENSSDUG00000018680) #16	ciarta (ENSSDUG00000018656) #17	mrps21 (ENSSDUG00000018643) #19	crabp2b (ENSSDUG00000018627) #20	scamp3 (ENSSDUG00000018597) #21	ENSSDUG00000018582 #22	ash1l (ENSSDUG00000018480) #23	lrrc71 (ENSSDUG00000018445) #24	ENSSDUG00000018423 ##25	ENSSDUG00000018270 #26	chrna11 (ENSSDUG00000018229) #27	snx27a (ENSSDUG00000018214) #28	icn (ENSSDUG00000018209) #29	s100a10a (ENSSDUG00000018200) #30	trim46b (ENSSDUG00000018130) #31	dpm3 (ENSSDUG00000018108) #32	efna1a (ENSSDUG00000018101) #33	ENSSDUG00000018087 #34	cks1b (ENSSDUG00000018075) #35	ENSSDUG00000018041 #36	ENSSDUG00000018030 #37
Yellowtail amberjack	MODERN SPECIES	2834	HERPUD2 (ENSSLDG00000013629)	ADGRB1 (ENSSLDG00000013658) #9	ENSSLDG00000013696	ENSSLDG00000013723 #10	hnrnpr (ENSSLDG00000013790) #11	dnajc8 (ENSSLDG00000013819) #12	ENSSLDG00000013844	clk2a (ENSSLDG00000013868) #13	cers2a (ENSSLDG00000013896) #14	celf3a (ENSSLDG00000013940) #15	rprd2a (ENSSLDG00000013967) #16	ciarta (ENSSLDG00000013983) #17	mrps21 (ENSSLDG00000014000) #19	crabp2b (ENSSLDG00000014006) #20	scamp3 (ENSSLDG00000014024) #21	ENSSLDG00000014064 #22	ash1l (ENSSLDG00000014132) #23	ENSSLDG00000014234 #25	ENSSLDG00000014293 #26	ENSSLDG00000014381 #27	SNX27 (ENSSLDG00000014428) #28	icn (ENSSLDG00000014466) #29	s100a10b (ENSSLDG00000014481)	trim46b (ENSSLDG00000014551) #31	dpm3 (ENSSLDG00000014600) #32	efna1a (ENSSLDG00000014614) #33	ENSSLDG00000014634 #34	cks1b (ENSSLDG00000014648) #35	ENSSLDG00000014665 #36	ENSSLDG00000014676 #37	s100u (ENSSLDG00000014685)
Barramundi perch	MODERN SPECIES	279							ENSLCAG00010022083	clk2a (ENSLCAG00010022115) #13	cers2a (ENSLCAG00010022234) #14	celf3a (ENSLCAG00010022247) #15	rprd2a (ENSLCAG00010022260) #16	ciarta (ENSLCAG00010022265) #17	mrps21 (ENSLCAG00010022269) #19	crabp2b (ENSLCAG00010022272) #20	scamp3 (ENSLCAG00010022275) #21	ENSLCAG00010022276 #22	lrrc71 (ENSLCAG00010022303) #24	ENSLCAG00010022320 ##25	ENSLCAG00010022342 #26	snx27a (ENSLCAG00010022387) #28	chrna11 (ENSLCAG00010022490) #27	icn (ENSLCAG00010022492) #29	s100a10a (ENSLCAG00010022493) #30	trim46b (ENSLCAG00010022498) #31	dpm3 (ENSLCAG00010022499) #32	efna1a (ENSLCAG00010022500) #33	ENSLCAG00010022502 #34	cks1b (ENSLCAG00010022503) #35	ENSLCAG00010022506 #36	ENSLCAG00010022508 #37	s100u (ENSLCAG00010022510)
Pleuronectoidei	ANCESTRAL SPECIES	54			ENSGT00940000157432.A #9	ENSGT00940000165091.c #10	ENSGT00940000153511.a #11	ENSGT00390000012569.a #12	ENSGT00940000175483	ENSGT00940000154947.k #13	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920 #29	ENSGT00940000165795.d #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000177151
Turbot	MODERN SPECIES	14	ENSSMAG00000001918	ENSSMAG00000001969	ENSSMAG00000002072	ENSSMAG00000002106 #9	ENSSMAG00000002272 #11	dnajc8 (ENSSMAG00000002355) #12	ENSSMAG00000002396	ENSSMAG00000002407 #13	cers2a (ENSSMAG00000002429) #14	celf3a (ENSSMAG00000002478) #15	rprd2a (ENSSMAG00000002507) #16	ciarta (ENSSMAG00000002523) #17	mrps21 (ENSSMAG00000002544) #19	crabp2b (ENSSMAG00000002607) #20	scamp3 (ENSSMAG00000002617) #21	ENSSMAG00000002626 #22	ash1l (ENSSMAG00000002663) #23	lrrc71 (ENSSMAG00000002819) #24	ENSSMAG00000029355 #25	ENSSMAG00000002845 #26	ENSSMAG00000002934 #27	ENSSMAG00000002961 #28	ENSSMAG00000002999 #29	s100a10a (ENSSMAG00000034030) #30	trim46b (ENSSMAG00000003138) #31	dpm3 (ENSSMAG00000003191) #32	efna1a (ENSSMAG00000003221) #33	ENSSMAG00000026861 #34	ENSSMAG00000025169 #35	ENSSMAG00000003243 #36	s100s (ENSSMAG00000003264)
Tongue sole	MODERN SPECIES	9	spag1a (ENSCSEG00000008256)	ENSCSEG00000008226	ADGRB1 (ENSCSEG00000008104) #9	ENSCSEG00000008062 #10	hnrnpr (ENSCSEG00000008039) #11	dnajc8 (ENSCSEG00000008018) #12	ENSCSEG00000008006	clk2a (ENSCSEG00000007968) #13	cers2a (ENSCSEG00000007949) #14	celf3a (ENSCSEG00000007913) #15	rprd2a (ENSCSEG00000007901) #16	ciarta (ENSCSEG00000007893) #17	mrps21 (ENSCSEG00000007889) #19	crabp2b (ENSCSEG00000007867) #20	scamp3 (ENSCSEG00000007851) #21	ENSCSEG00000007840 #22	ash1l (ENSCSEG00000007773) #23	lrrc71 (ENSCSEG00000007755) #24	lrrc71 (ENSCSEG00000007744) #24	ENSCSEG00000007730 ##25	ENSCSEG00000007620 #26	chrna11 (ENSCSEG00000007567) #27	snx27a (ENSCSEG00000007535) #28	icn (ENSCSEG00000007528) #29	s100a10a (ENSCSEG00000007523) #30	trim46b (ENSCSEG00000007470) #31	dpm3 (ENSCSEG00000007456) #32	efna1a (ENSCSEG00000007442) #33	ENSCSEG00000007421 #34	cks1b (ENSCSEG00000007408) #35	ENSCSEG00000007401 #36
Tiger tail seahorse	MODERN SPECIES	116						txnipa (ENSHCOG00000004936)	gatad2b (ENSHCOG00000004961)	gnrhr1 (ENSHCOG00000005629)	cers2a (ENSHCOG00000005722) #14	celf3a (ENSHCOG00000005746) #15	ENSHCOG00000005751	ENSHCOG00000005761 #18	mrps21 (ENSHCOG00000005818) #19	mrps21 (ENSHCOG00000005872) #19	scamp3 (ENSHCOG00000005882) #21	ENSHCOG00000005896 #22	ash1l (ENSHCOG00000005991) #23	ENSHCOG00000006017
Pinecone sodierfish	MODERN SPECIES	2	SLC4A7 (ENSMMDG00005009210)	HERPUD2 (ENSMMDG00005017606)	ADGRB1 (ENSMMDG00005017617) #9	ENSMMDG00005017621 #10	hnrnpr (ENSMMDG00005017624) #11	dnajc8 (ENSMMDG00005017640) #12	ENSMMDG00005017648	clk2a (ENSMMDG00005017688) #13	cers2a (ENSMMDG00005019037) #14	celf3a (ENSMMDG00005019040) #15	rprd2a (ENSMMDG00005019047) #16	ciarta (ENSMMDG00005019051) #17	mrps21 (ENSMMDG00005019054) #19	crabp2b (ENSMMDG00005019059) #20	scamp3 (ENSMMDG00005019065) #21	ENSMMDG00005019068 #22	ash1l (ENSMMDG00005019071) #23	lrrc71 (ENSMMDG00005019074) #24	ENSMMDG00005019077 #25	ENSMMDG00005019098 #26	chrna11 (ENSMMDG00005019119) #27	snx27a (ENSMMDG00005019134) #28	ENSMMDG00005019208	s100a10a (ENSMMDG00005019210) #30	trim46b (ENSMMDG00005019227) #31	dpm3 (ENSMMDG00005019358) #32	efna1a (ENSMMDG00005019360) #33	ENSMMDG00005019363 #34	cks1b (ENSMMDG00005019366) #35	ENSMMDG00005019369 #36	ENSMMDG00005019374 #37
Cod	MODERN SPECIES	14	MRPL24 (ENSGMOG00000016999)	ENSGMOG00000017017	ENSGMOG00000017067	ENSGMOG00000017087	ENSGMOG00000017112	ENSGMOG00000036737	ENSGMOG00000028985	ENSGMOG00000034358	ENSGMOG00000017303	ENSGMOG00000017329	ENSGMOG00000015897	ENSGMOG00000017440	ENSGMOG00000017691	crabp2b (ENSGMOG00000005531) #20	scamp3 (ENSGMOG00000005539) #21	ENSGMOG00000005577 #22	ash1l (ENSGMOG00000026862) #23	lrrc71 (ENSGMOG00000027589) #24	ENSGMOG00000005839 #25	ENSGMOG00000005850 #26	chrna11 (ENSGMOG00000014782) #27	snx27a (ENSGMOG00000019441) #28	ENSGMOG00000019446	ENSGMOG00000030600	s100a10a (ENSGMOG00000030248) #30	trim46b (ENSGMOG00000010964) #31	dpm3 (ENSGMOG00000020118) #32	efna1a (ENSGMOG00000033783) #33	ENSGMOG00000010947 #34	cks1b (ENSGMOG00000023116) #35	ENSGMOG00000024951 #36
Protacanthopterygii	ANCESTRAL SPECIES	119													ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b #26	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00390000000920.j #29	ENSGT00440000034367 #24	ENSGT00940000165795 #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.b.b ##37
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	659				ENSGT00940000157432.A.f #9	ENSGT00940000165091.c #10	ENSGT00940000153511.a.ob.a.a #11	ENSGT00390000012569.a.lb #12	ENSGT00940000154947.k.d #13	ENSGT00940000157471.b	ENSGT01030000234515.a.b.a.a.e.c #14	ENSGT00940000154716.gc.b.d #15	ENSGT00950000183094.a.n.c #16	ENSGT00390000018360.b.e #17	ENSGT00940000157619.a.b.f #20	ENSGT00940000160917.v #21	ENSGT00940000157203.d.c #22
Salmoninae_a	ANCESTRAL SPECIES	48	ENSGT00940000157045.b.e	ENSGT00530000063023.B.f	ENSGT00390000017671.a.a.b	ENSGT00940000157432.A.f #9	ENSGT00940000165091.c #10	ENSGT00940000153511.a.ob.a.a #11	ENSGT00390000012569.a.lb #12	ENSGT00940000154947.k.d #13	ENSGT00940000157471.b	ENSGT01030000234515.a.b.a.a.e.c #14	ENSGT00940000154716.gc.b.d #15	ENSGT00950000183094.a.n.c #16	ENSGT00390000018360.b.e #17	ENSGT00940000157619.a.b.f #20	ENSGT00940000160917.v #21	ENSGT00940000157203.d.c #22	ENSGT00940000156698.c.c #23	ENSGT00950000182891.b.a.a ##25	ENSGT00950000182904.a.a.a.b.c.b #26	ENSGT00940000164921.b.d #27	ENSGT00950000183212.C.c.a.c #28	ENSGT00390000000920.j.a #29	ENSGT00940000165795.f.a #30	ENSGT00970000197205.D	ENSGT00970000197205.B	ENSGT00940000158021.c.a #31	ENSGT00990000213475	ENSGT00940000159919.b.c #33	ENSGT00940000166681.i.a #34	ENSGT01010000222336.a.a.a.a.a
Oncorhynchus	ANCESTRAL SPECIES	16	ENSGT00940000157045.b.e	ENSGT00530000063023.B.f	ENSGT00390000017671.a.a.b	ENSGT00940000157432.A.f #9	ENSGT00940000165091.c #10	ENSGT00940000153511.a.ob.a.a #11	ENSGT00390000012569.a.lb #12	ENSGT00940000154947.k.d #13	ENSGT00940000157471.b.e	ENSGT01030000234515.a.b.a.a.e.c #14	ENSGT00940000154716.gc.b.d #15	ENSGT00950000183094.a.n.c #16	ENSGT00390000018360.b.e #17	ENSGT00940000157619.a.b.f #20	ENSGT00940000160917.v #21	ENSGT00940000157203.d.c #22	ENSGT00940000156698.c.c #23	ENSGT00950000182891.b.a.a ##25	ENSGT00940000164921.b.d #27	ENSGT00950000183212.C.c.a.c #28	ENSGT00390000000920.j.a #29	ENSGT00940000165795.f.a #30	ENSGT00970000197205.D	ENSGT00970000197205.B	ENSGT00940000158021.c.a #31	ENSGT00990000213475	ENSGT00940000159919.b.c #33	ENSGT00940000166681.i.a #34	ENSGT01010000222336.a.a.a.a.a	ENSGT00950000182971.B.b.w.a #35	ENSGT00730000111747.b.e #36
Oncorhynchus_a	ANCESTRAL SPECIES	6	ENSGT00940000157045.b.e	ENSGT00530000063023.B.f	ENSGT00390000017671.a.a.b	ENSGT00940000157432.A.f #9	ENSGT00940000165091.c #10	ENSGT00940000153511.a.ob.a.a #11	ENSGT00390000012569.a.lb #12	ENSGT00940000154947.k.d #13	ENSGT00940000157471.b.e	ENSGT01030000234515.a.b.a.a.e.c #14	ENSGT00940000154716.gc.b.d #15	ENSGT00950000183094.a.n.c #16	ENSGT00390000018360.b.e #17	ENSGT00940000157619.a.b.f #20	ENSGT00940000160917.v #21	ENSGT00940000157203.d.c #22	ENSGT00940000156698.c.c #23	ENSGT00940000164921.b.d #27	ENSGT00950000183212.C.c.a.c #28	ENSGT00390000000920.j.a #29	ENSGT00940000165795.f.a #30	ENSGT00970000197205.D	ENSGT00970000197205.B	ENSGT00940000158021.c.a #31	ENSGT00940000159919.b.c #33	ENSGT00940000166681.i.a #34	ENSGT01010000222336.a.a.a.a.a	ENSGT00950000182971.B.b.w.a #35	ENSGT00730000111747.b.e #36	ENSGT00940000177151	ENSGT00940000168219.a
Coho salmon	MODERN SPECIES	8	ENSOKIG00005025460	ENSOKIG00005025515	HERPUD2 (ENSOKIG00005026004)	ADGRB1 (ENSOKIG00005026031) #9	ENSOKIG00005026216 #10	hnrnpr (ENSOKIG00005026241) #11	dnajc8 (ENSOKIG00005026404) #12	clk2a (ENSOKIG00005026569) #13	ENSOKIG00005027160	cers2a (ENSOKIG00005027727) #14	celf3a (ENSOKIG00005027935) #15	rprd2a (ENSOKIG00005027984) #16	ciarta (ENSOKIG00005027997) #17	crabp2b (ENSOKIG00005028014) #20	scamp3 (ENSOKIG00005028025) #21	ENSOKIG00005019989 #22	ash1l (ENSOKIG00005019998) #23	ENSOKIG00005020310	ENSOKIG00005020327 #25	ENSOKIG00005020354 #27	SNX27 (ENSOKIG00005020457) #28	ENSOKIG00005020618 #29	s100a10a (ENSOKIG00005020627) #30	ENSOKIG00005020635	trim46b (ENSOKIG00005020646) #31	efna1a (ENSOKIG00005020700) #33	ENSOKIG00005020712 #34	ENSOKIG00005020715	cks1b (ENSOKIG00005020717) #35	ENSOKIG00005020723 #36	ENSOKIG00005020734
Chinook salmon	MODERN SPECIES	5	SLC4A7 (ENSOTSG00005013377)	ENSOTSG00005012867	HERPUD2 (ENSOTSG00005012859)	ADGRB1 (ENSOTSG00005012277) #9	ENSOTSG00005012261 #10	ENSOTSG00005011733	dnajc8 (ENSOTSG00005011501) #12	clk2a (ENSOTSG00005010267) #13	ENSOTSG00005010266	cers2a (ENSOTSG00005010239) #14	celf3a (ENSOTSG00005010230) #15	rprd2a (ENSOTSG00005010227) #16	ciarta (ENSOTSG00005010224) #17	crabp2b (ENSOTSG00005010221) #20	scamp3 (ENSOTSG00005010217) #21	ENSOTSG00005010214 #22	ENSOTSG00005010194 #25	chrna11 (ENSOTSG00005010149) #27	snx27a (ENSOTSG00005009884) #28	ENSOTSG00005009882 #29	s100a10a (ENSOTSG00005009881) #30	ENSOTSG00005009880	ENSOTSG00005009879	ENSOTSG00005009878	trim46b (ENSOTSG00005009877) #31	efna1a (ENSOTSG00005009865) #33	ENSOTSG00005009864 #34	ENSOTSG00005009862	cks1b (ENSOTSG00005009860) #35	ENSOTSG00005009858 #36	ENSOTSG00005009857
Rainbow trout	MODERN SPECIES	9	ENSOMYG00000010766	ENSOMYG00000007482	ENSOMYG00000006610	ENSOMYG00000006112 #9	ENSOMYG00000077778 #10	ENSOMYG00000043110 #11	dnjc8 (ENSOMYG00000043024) #12	ENSOMYG00000042945 #13	ENSOMYG00000042924	cers2a (ENSOMYG00000042862) #14	celf3a (ENSOMYG00000024971) #15	rprd2a (ENSOMYG00000042841) #16	ciarta (ENSOMYG00000042838) #17	crabp2b (ENSOMYG00000042831) #20	scamp3 (ENSOMYG00000042820) #21	ENSOMYG00000042816 #22	ash1l (ENSOMYG00000042810) #23	ENSOMYG00000042802 ##25	ENSOMYG00000049157	ENSOMYG00000042663 #27	snx27a (ENSOMYG00000042083) #28	ENSOMYG00000042020 #29	ENSOMYG00000042011	ENSOMYG00000042008	s100a10a (ENSOMYG00000042016) #30	trim46b (ENSOMYG00000041994) #31	ENSOMYG00000041987	ENSOMYG00000041983 #33	ENSOMYG00000060014 #34	ENSOMYG00000041977	ENSOMYG00000063155
Salmo	ANCESTRAL SPECIES	40	ENSGT00940000157045.b.e	ENSGT00530000063023.B.f	ENSGT00390000017671.a.a.b	ENSGT00940000157432.A.f #9	ENSGT00940000165091.c #10	ENSGT00940000153511.a.ob.a.a #11	ENSGT00390000012569.a.lb #12	ENSGT00940000154947.k.d #13	ENSGT00940000157471.b	ENSGT01030000234515.a.b.a.a.e.c #14	ENSGT00940000154716.gc.b.d #15	ENSGT00950000183094.a.n.c #16	ENSGT00390000018360.b.e #17	ENSGT00940000157619.a.b.f #20	ENSGT00940000160917.v #21	ENSGT00940000157203.d.c #22	ENSGT00940000156698.c.c #23	ENSGT00950000182891.b.a.a ##25	ENSGT00950000182904.a.a.a.b.c.b #26	ENSGT00940000164921.b.d #27	ENSGT00950000183212.C.c.a.c #28	ENSGT00390000000920.j.a #29	ENSGT00940000165795.f.a #30	ENSGT00970000197205.D	ENSGT00970000197205.B	ENSGT00940000158021.c.a #31	ENSGT00990000213475	ENSGT00940000159919.b.c #33	ENSGT00940000166681.i.a #34	ENSGT01010000222336.a.a.a.a.a	ENSGT00950000182971.B.b #35
Atlantic salmon	MODERN SPECIES	19	ENSSSAG00000063614	ENSSSAG00000063607	ENSSSAG00000107886	ENSSSAG00000063533 #9	ENSSSAG00000084525 #10	HNRPR (ENSSSAG00000061343) #11	dnjc8 (ENSSSAG00000059917) #12	ENSSSAG00000056033 #13	ENSSSAG00000055973	cers2a (ENSSSAG00000055868) #14	celf3a (ENSSSAG00000055446) #15	rprd2a (ENSSSAG00000055435) #16	ciarta (ENSSSAG00000107330) #17	crabp2b (ENSSSAG00000055413) #20	scamp3 (ENSSSAG00000055404) #21	ENSSSAG00000055397 #22	ENSSSAG00000055243 #25	ENSSSAG00000107195 #26	ENSSSAG00000090235 #26	chrna11 (ENSSSAG00000096453) #27	snx27a (ENSSSAG00000054800) #28	s100a10a (ENSSSAG00000118630) #30	ENSSSAG00000084587	s10a4 (ENSSSAG00000054772)	trim46b (ENSSSAG00000054481) #31	ENSSSAG00000119413	ENSSSAG00000054460 #33	ENSSSAG00000116780 #34	ENSSSAG00000097250	ENSSSAG00000054447	ENSSSAG00000054441 #35
River trout	MODERN SPECIES	27	ENSSTUG00000040914	ENSSTUG00000040881	ENSSTUG00000040871	ADGRB1 (ENSSTUG00000039877) #9	ENSSTUG00000039826 #10	hnrnpr (ENSSTUG00000039215) #11	dnajc8 (ENSSTUG00000039024) #12	clk2a (ENSSTUG00000037867) #13	setdb1a (ENSSTUG00000037595)	cers2a (ENSSTUG00000037420) #14	celf3a (ENSSTUG00000037316) #15	rprd2a (ENSSTUG00000037297) #16	ciarta (ENSSTUG00000037291) #17	crabp2b (ENSSTUG00000037284) #20	scamp3 (ENSSTUG00000037278) #21	RNF115 (ENSSTUG00000037253) #22	ash1l (ENSSTUG00000037149) #23	ENSSTUG00000037109 ##25	chrna11 (ENSSTUG00000037089) #27	snx27a (ENSSTUG00000042380) #28	ENSSTUG00000042315 #29	s100a10a (ENSSTUG00000042289) #30	ENSSTUG00000042278	ENSSTUG00000042240	trim46b (ENSSTUG00000042165) #31	ENSSTUG00000042141	efna1a (ENSSTUG00000042118) #33	ENSSTUG00000042113 #34	ENSSTUG00000042045	ENSSTUG00000041948 #35	ENSSTUG00000041915 #36
Huchen	MODERN SPECIES	489	ENSHHUG00000048148	ENSHHUG00000048160	ENSHHUG00000048163	ENSHHUG00000048173	ENSHHUG00000048175	ENSHHUG00000048180	ENSHHUG00000048183	ENSHHUG00000048187	ENSHHUG00000048190	sema3e (ENSHHUG00000048195)	celf3a (ENSHHUG00000048275) #15	rprd2a (ENSHHUG00000048308) #16	ciarta (ENSHHUG00000048309) #17	crabp2b (ENSHHUG00000048311) #20	scamp3 (ENSHHUG00000048313) #21	RNF115 (ENSHHUG00000048314) #22	ash1l (ENSHHUG00000048316) #23
Salmoninae	ANCESTRAL SPECIES	164	ENSGT00940000157045.b.f	ENSGT00390000017671.a.a.a	ENSGT00940000178110 #7	ENSGT00940000157432.A.e #9	ENSGT00940000167191	ENSGT00940000153511.a.ob.a.b #11	ENSGT00390000012569.a.mb #12	ENSGT00940000154947.k.c #13	ENSGT01030000234515.a.b.a.a.e.d #14	ENSGT00940000154716.gc.b.c #15	ENSGT00950000183094.a.n.d #16	ENSGT00390000018360.b.f #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b.e #20	ENSGT00940000160917.u #21	ENSGT00940000157203.d.d #22	ENSGT00940000156698.c.d #23	ENSGT00440000034367 #24	ENSGT00940000156698.c.c #23	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b.d #26	ENSGT00940000164921.b.c #27	ENSGT00950000183212.C.c.a.d #28	ENSGT00390000000920.j.b #29	ENSGT00940000165795.f.b #30	ENSGT00970000197205.A	ENSGT00940000158021.c.b #31	ENSGT00390000008892 #32	ENSGT00940000159919.b.d #33	ENSGT00940000166681.i.b #34	ENSGT00950000182971.B.b #35
Salmoninae_a	ANCESTRAL SPECIES	118	ENSGT00940000157045.b.f	ENSGT00390000017671.a.a.a	ENSGT00940000178110 #7	ENSGT00940000157432.A.e #9	ENSGT00940000167191	ENSGT00940000153511.a.ob.a.b #11	ENSGT00390000012569.a.mb #12	ENSGT00940000154947.k.c #13	ENSGT01030000234515.a.b.a.a.e.d #14	ENSGT00940000154716.gc.b.c #15	ENSGT00950000183094.a.n.d #16	ENSGT00390000018360.b.f #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b.e #20	ENSGT00940000160917.u #21	ENSGT00940000157203.d.d #22	ENSGT00940000156698.c.d #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b.d #26	ENSGT00940000164921.b.c #27	ENSGT00950000183212.C.c.a.d #28	ENSGT00390000000920.j.b #29	ENSGT00970000197205.A	ENSGT00940000158021.c.b #31	ENSGT00390000008892 #32	ENSGT00940000159919.b.d #33	ENSGT00940000166681.i.b #34	ENSGT00940000166681.j #34	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b.e #36
Oncorhynchus	ANCESTRAL SPECIES	40	ENSGT00940000157045.b.f	ENSGT00390000017671.a.a.a	ENSGT00940000178110 #7	ENSGT00940000157432.A.e #9	ENSGT00940000167191	ENSGT00940000153511.a.ob.a.b #11	ENSGT00390000012569.a.mb #12	ENSGT00940000154947.k.c #13	ENSGT01030000234515.a.b.a.a.e.d #14	ENSGT00940000154716.gc.b.c #15	ENSGT00950000183094.a.n.d #16	ENSGT00390000018360.b.f #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b.e #20	ENSGT00940000160917.u #21	ENSGT00940000157203.d.d #22	ENSGT00940000156698.c.d #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b.d #26	ENSGT00940000164921.b.c #27	ENSGT00950000183212.C.c.a.d #28	ENSGT00940000165956.f	ENSGT00940000165795.f.b #30	ENSGT00970000197205.C	ENSGT00970000197205.E	ENSGT00970000197205.A	ENSGT00940000158021.c.b #31	ENSGT00390000008892 #32	ENSGT00940000159919.b.d #33	ENSGT00940000166681.i.b #34
Rainbow trout	MODERN SPECIES	24	ENSOMYG00000011522	ENSOMYG00000071431 #7	ENSOMYG00000008228 #9	ENSOMYG00000075777	ENSOMYG00000031715 #11	dnajc8 (ENSOMYG00000004831) #12	ENSOMYG00000004855 #13	ENSOMYG00000062891	cers2a (ENSOMYG00000071708) #14	celf3a (ENSOMYG00000024025) #15	rprd2a (ENSOMYG00000062185) #16	ciarta (ENSOMYG00000023629) #17	mrps21 (ENSOMYG00000023645) #19	ENSOMYG00000060647	scamp3 (ENSOMYG00000069466) #21	ENSOMYG00000011264 #22	ash1l (ENSOMYG00000011156) #23	ENSOMYG00000004535 #24	ENSOMYG00000004382 #25	ENSOMYG00000004215 #26	chrna11 (ENSOMYG00000011456) #27	snx27a (ENSOMYG00000005256) #28	ENSOMYG00000074965	s100a10a (ENSOMYG00000000673) #30	ENSOMYG00000034864	ENSOMYG00000034856	ENSOMYG00000059255	trim46b (ENSOMYG00000005457) #31	dpm3 (ENSOMYG00000070307) #32	efna1a (ENSOMYG00000038281) #33	ENSOMYG00000041980 #34
Oncorhynchus_a	ANCESTRAL SPECIES	96															ENSGT00940000160917.u #21	ENSGT00940000157203.d.d #22	ENSGT00940000156698.c.d #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b.d #26	ENSGT00940000164921.b.c #27	ENSGT00950000183212.C.c.a.d #28	ENSGT00940000165956.f	ENSGT00940000165795.f.b #30	ENSGT00970000197205.C	ENSGT00970000197205.E	ENSGT00970000197205.A	ENSGT00940000158021.c.b #31	ENSGT00390000008892 #32	ENSGT00940000159919.b.d #33	ENSGT00940000166681.i.b #34
Coho salmon	MODERN SPECIES	5	ccdc32 (ENSOKIG00005012674)	pcmtl (ENSOKIG00005012688)	ENSOKIG00005012861	eml1 (ENSOKIG00005013228)	evla (ENSOKIG00005020892)	YY1 (ENSOKIG00005020986)	tpp1 (ENSOKIG00005021071)	MDGA2 (ENSOKIG00005021503)	KLHDC2 (ENSOKIG00005022925)	NEMF (ENSOKIG00005023080)	MOK (ENSOKIG00005023201)	WDR20 (ENSOKIG00005023272)	ENSOKIG00005023329	ENSOKIG00005023380	scamp3 (ENSOKIG00005023497) #21	ENSOKIG00005023525 #22	ash1l (ENSOKIG00005023712) #23	lrrc71 (ENSOKIG00005026347) #24	ENSOKIG00005026390 ##25	ENSOKIG00005026448 #26	chrna11 (ENSOKIG00005026485) #27	snx27a (ENSOKIG00005026544) #28	ENSOKIG00005026985	s100a10a (ENSOKIG00005027005) #30	ENSOKIG00005027021	ENSOKIG00005027034	ENSOKIG00005027057	trim46b (ENSOKIG00005027102) #31	dpm3 (ENSOKIG00005027324) #32	efna1a (ENSOKIG00005027330) #33	ENSOKIG00005027348 #34
Chinook salmon	MODERN SPECIES	529															scamp3 (ENSOTSG00005023615) #21	ENSOTSG00005023614 #22
Salmo	ANCESTRAL SPECIES	2	ENSGT00940000158728.k.d	ENSGT00940000157045.b.f	ENSGT00390000017671.a.a.a	ENSGT00940000157432.A.e #9	ENSGT00940000167191	ENSGT00940000153511.a.ob.a.b #11	ENSGT00390000012569.a.mb #12	ENSGT00940000154947.k.c #13	ENSGT01030000234515.a.b.a.a.e.d #14	ENSGT00940000154716.gc.b.c #15	ENSGT00950000183094.a.n.d #16	ENSGT00390000018360.b.f #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b.e #20	ENSGT00940000160917.u #21	ENSGT00940000157203.d.d #22	ENSGT00940000156698.c.d #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.a #25	ENSGT00950000182904.a.a.a.b.d #26	ENSGT00940000164921.b.c #27	ENSGT00950000183212.C.c.a.d #28	ENSGT00390000000920.j.b #29	ENSGT00940000165795.f.b #30	ENSGT00970000197205.C.b	ENSGT00970000197205.C.a	ENSGT00970000197205.A	ENSGT00940000158021.c.b #31	ENSGT00390000008892 #32	ENSGT00940000159919.b.d #33	ENSGT00940000166681.i.b #34
River trout	MODERN SPECIES	29	eomesa (ENSSTUG00000032882)	SLC4A7 (ENSSTUG00000032913)	HERPUD2 (ENSSTUG00000033271)	ADGRB1 (ENSSTUG00000033292) #9	ENSSTUG00000033356	hnrnpr (ENSSTUG00000033377) #11	dnajc8 (ENSSTUG00000034036) #12	clk2a (ENSSTUG00000034141) #13	cers2a (ENSSTUG00000034904) #14	celf3a (ENSSTUG00000034924) #15	rprd2a (ENSSTUG00000035003) #16	ciarta (ENSSTUG00000035011) #17	mrps21 (ENSSTUG00000035022) #19	crabp2b (ENSSTUG00000035033) #20	scamp3 (ENSSTUG00000035050) #21	ENSSTUG00000035067 #22	ash1l (ENSSTUG00000035137) #23	lrrc71 (ENSSTUG00000036681) #24	ENSSTUG00000036751 #25	ENSSTUG00000036811 #26	ENSSTUG00000036829	chrna11 (ENSSTUG00000036838) #27	snx27a (ENSSTUG00000036928) #28	ENSSTUG00000038439 #29	ENSSTUG00000038449	s100a10a (ENSSTUG00000038454) #30	ENSSTUG00000038461	ENSSTUG00000038468	ENSSTUG00000038480	trim46b (ENSSTUG00000038500) #31	dpm3 (ENSSTUG00000038600) #32
Huchen	MODERN SPECIES	70	SLC4A7 (ENSHHUG00000032793)	HERPUD2 (ENSHHUG00000033105)	ADGRB1 (ENSHHUG00000033118) #9	hnrnpr (ENSHHUG00000033360) #11	ENSHHUG00000033394 #10	dnajc8 (ENSHHUG00000033401) #12	clk2a (ENSHHUG00000033548) #13	ENSHHUG00000033730	cers2a (ENSHHUG00000033733) #14	celf3a (ENSHHUG00000033743) #15	rprd2a (ENSHHUG00000033815) #16	ciarta (ENSHHUG00000033820) #17	mrps21 (ENSHHUG00000033835) #19	crabp2b (ENSHHUG00000033844) #20	scamp3 (ENSHHUG00000033855) #21	ENSHHUG00000033861 #22	ash1l (ENSHHUG00000033874) #23	ENSHHUG00000033897	lrrc71 (ENSHHUG00000033889) #24	ENSHHUG00000033900 #25	ENSHHUG00000033946 #26	ENSHHUG00000033959 #27	ENSHHUG00000033963
Northern pike	MODERN SPECIES	9	s100u (ENSELUG00000008487)	s100a11 (ENSELUG00000008472) ##37	ENSELUG00000008428 #36	cks1b (ENSELUG00000008403) #35	ENSELUG00000001706 #34	efna1a (ENSELUG00000033446) #33	dpm3 (ENSELUG00000001608) #32	trim46b (ENSELUG00000008327) #31	s100a10a (ENSELUG00000029139) #30	ENSELUG00000008197 #29	snx27a (ENSELUG00000008184) #28	chrna11 (ENSELUG00000008156) #27	ENSELUG00000008074 #26	RPS27 (ENSELUG00000007964) ##25	scamp3 (ENSELUG00000007922) #21	ENSELUG00000007883 #22	ash1l (ENSELUG00000007838) #23	ENSELUG00000026674	lrrc71 (ENSELUG00000007788) #24	crabp2 (ENSELUG00000007739) #20	mrps21 (ENSELUG00000025966) #19	FEL (ENSELUG00000007697)	ENSELUG00000032909	neu1 (ENSELUG00000007673)	prrc2a (ENSELUG00000001569)	CSNK2B (ENSELUG00000007616)	ENSELUG00000007598	ENSELUG00000030117	ENSELUG00000029130	ENSELUG00000029911	ENSELUG00000027731
Otomorpha	ANCESTRAL SPECIES	6	ENSGT00390000015518	ENSGT00940000155256.d.b.b	ENSGT00940000158616	ENSGT00990000204044	ENSGT00730000111056.h	ENSGT00940000165835.b	ENSGT00390000003308.a.b	ENSGT00950000182891.b.b.a #25	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.b.a ##25	ENSGT00950000182891.b.b.b.b.a ##25	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00940000165795 #30	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00390000010118.c.b	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.b ##37
Clupeiformes	ANCESTRAL SPECIES	53	ENSGT00940000165835.b	ENSGT00390000003308.a.b	ENSGT00950000182929.B.a.b	ENSGT00950000182929.B.b.a	ENSGT00530000064050.a	ENSGT00940000154703.i	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00940000164936.a #18	ENSGT00940000177218	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00950000182891.b.b.b.a ##25	ENSGT00950000182891.b.b.b.b.a ##25	ENSGT00940000164921.b #27	ENSGT00950000183212.C.c.a #28	ENSGT00940000162189	ENSGT00940000158021.c #31	ENSGT00390000008892 #32	ENSGT00940000159919.b #33	ENSGT00940000166681 #34	ENSGT00390000010118.c.b	ENSGT00950000182971.B.b #35	ENSGT00730000111747.b #36	ENSGT00940000154172.b ##37
Atlantic herring	MODERN SPECIES	10	ENSCHAG00000012111	apoa4a (ENSCHAG00000012113)	apoa4a (ENSCHAG00000012121)	ENSCHAG00000012150	ENSCHAG00000012162	psmd4a (ENSCHAG00000012208)	ENSCHAG00000012508	ENSCHAG00000012826	cers2a (ENSCHAG00000012840) #14	celf3a (ENSCHAG00000012901) #15	rprd2a (ENSCHAG00000012933) #16	ENSCHAG00000012941 #18	mrps21 (ENSCHAG00000012972) #19	crabp2b (ENSCHAG00000012995) #20	scamp3 (ENSCHAG00000013007) #21	ENSCHAG00000013044 #22	lrrc71 (ENSCHAG00000014195) #24	rps27.1 (ENSCHAG00000014262) ##25	chrna11 (ENSCHAG00000014329) #27	snx27a (ENSCHAG00000014659) #28	s100a10b (ENSCHAG00000014774)	trim46b (ENSCHAG00000014786) #31	dpm3 (ENSCHAG00000014792) #32	efna1a (ENSCHAG00000014797) #33	ENSCHAG00000014804 #34	si:dkey-266f7.9 (ENSCHAG00000014808)	ENSCHAG00000014814 #36	s100a11 (ENSCHAG00000014822) ##37	s100u (ENSCHAG00000014831)	s100s (ENSCHAG00000014838)	ENSCHAG00000014859
Denticle herring	MODERN SPECIES	12	ENSDCDG00000028334	lipea (ENSDCDG00000028235)	ENSDCDG00000028055	tomm40l (ENSDCDG00000028040)	ENSDCDG00000028025	apoa4a (ENSDCDG00000028021)	apoea (ENSDCDG00000027971)	psmd4a (ENSDCDG00000027909)	cers2a (ENSDCDG00000027900) #14	celf3a (ENSDCDG00000027831) #15	ENSDCDG00000027819	ciarta (ENSDCDG00000027818) #17	mrps21 (ENSDCDG00000027816) #19	crabp2b (ENSDCDG00000027815) #20	scamp3 (ENSDCDG00000027813) #21	ENSDCDG00000027810 #22	ash1l (ENSDCDG00000026916) #23	lrrc71 (ENSDCDG00000026899) #24	rps27.1 (ENSDCDG00000026898) ##25	chrna11 (ENSDCDG00000026894) #27	snx27a (ENSDCDG00000026420) #28	s100a10b (ENSDCDG00000026404)	trim46b (ENSDCDG00000026385) #31	dpm3 (ENSDCDG00000026381) #32	efna1a (ENSDCDG00000026379) #33	ENSDCDG00000026377 #34	si:dkey-266f7.9 (ENSDCDG00000026373)	cks1b (ENSDCDG00000026369) #35	ENSDCDG00000026366 #36	s100a11 (ENSDCDG00000026364) ##37	s100u (ENSDCDG00000026362)
Otophysi	ANCESTRAL SPECIES	64	ENSGT00940000166681 #34	ENSGT00940000159919.b #33	ENSGT00390000008892 #32	ENSGT00940000158021.c #31	ENSGT00940000165795 #30	ENSGT00950000183212.C.c.a #28	ENSGT00940000164921.b #27	ENSGT00950000182891.b.b.a #25	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00940000157471.b	ENSGT00940000154947.k #13	ENSGT01060000248708.b	ENSGT00940000154743.A.a.b	ENSGT00390000010641.i.b	ENSGT00940000163756.c.a	ENSGT01030000235274	ENSGT01010000223632	ENSGT00940000164382.b.a	ENSGT00510000046803.b.a.b	ENSGT00940000153298.i.b	ENSGT00940000159033	ENSGT00950000183106.a.b.a
Characiphysae	ANCESTRAL SPECIES	75	ENSGT00940000159919.b #33	ENSGT00390000008892 #32	ENSGT00940000158021.c #31	ENSGT00940000165795 #30	ENSGT00950000183212.C.c.a #28	ENSGT00940000164921.b #27	ENSGT00950000182891.b.b.a #25	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00940000154716.hc.b ##15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00940000157471.b	ENSGT00940000154947.k #13	ENSGT01060000248708.b	ENSGT00940000154743.A.a.b	ENSGT00390000010641.i.b	ENSGT00940000163756.c.a	ENSGT01030000235274	ENSGT01010000223632	ENSGT00940000164382.b.a	ENSGT00510000046803.b.a.b	ENSGT00940000153298.i.b	ENSGT00940000159033	ENSGT00950000183106.a.b.a
Characiphysae_b	ANCESTRAL SPECIES	61	ENSGT00940000159919.b #33	ENSGT00390000008892 #32	ENSGT00940000158021.c #31	ENSGT00940000165795 #30	ENSGT00950000183212.C.c.a #28	ENSGT00940000164921.b #27	ENSGT00950000182891.b.b.a #25	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00940000154716.hc.b ##15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00940000157471.b	ENSGT00940000154947.k #13	ENSGT01060000248708.b	ENSGT00940000154743.A.a.b	ENSGT00390000010641.i.b	ENSGT00940000163756.c.a	ENSGT01030000235274	ENSGT01010000223632	ENSGT00940000164382.b.a	ENSGT00510000046803.b.a.b	ENSGT00940000153298.i.b	ENSGT00940000159033	ENSGT00950000183106.a.b.a
Characoidei	ANCESTRAL SPECIES	82	ENSGT00390000008892 #32	ENSGT00940000158021.c #31	ENSGT00940000165795 #30	ENSGT00950000183212.C.c.a #28	ENSGT00940000164921.b #27	ENSGT00950000182891.b.b.b.b.a.b ##25	ENSGT00950000182891.b.b.a #25	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00940000154716.hc.b ##15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00940000157471.b	ENSGT00940000154947.k #13	ENSGT01060000248708.b	ENSGT00940000154743.A.a.b	ENSGT00390000010641.i.b	ENSGT00940000163756.c.a.e
Red-bellied piranha	MODERN SPECIES	251	ENSPNAG00000004701 #34	efna1a (ENSPNAG00000017599) #33	dpm3 (ENSPNAG00000017579) #32	trim46b (ENSPNAG00000017549) #31	s100a10a (ENSPNAG00000017454) #30	snx27a (ENSPNAG00000017445) #28	chrna11 (ENSPNAG00000017403) #27	rps27.1 (ENSPNAG00000017336) ##25	cers2a (ENSPNAG00000017316) #14	celf3a (ENSPNAG00000017276) #15	rprd2a (ENSPNAG00000017205) #16	ENSPNAG00000017143 #18	mrps21 (ENSPNAG00000017115) #19	crabp2b (ENSPNAG00000017056) #20	scamp3 (ENSPNAG00000003461) #21	ENSPNAG00000003460 #22	ash1l (ENSPNAG00000016981) #23	lrrc71 (ENSPNAG00000016823) #24	setdb1a (ENSPNAG00000003444)	clk2a (ENSPNAG00000016768) #13	si:ch211-81a5.8 (ENSPNAG00000016739)	ENSPNAG00000016712	ndufv1 (ENSPNAG00000016658)	ENSPNAG00000016594
Mexicana tetra	MODERN SPECIES	15	dpm3 (ENSAMXG00000025548) #32	trim46b (ENSAMXG00000009789) #31	s100a10a (ENSAMXG00000009806) #30	snx27a (ENSAMXG00000009816) #28	chrna11 (ENSAMXG00000009834) #27	ENSAMXG00000033744	ENSAMXG00000001908 #25	cers2a (ENSAMXG00000009905) #14	celf3a (ENSAMXG00000009926) #15	ENSAMXG00000036838 ##15	rprd2a (ENSAMXG00000042601) #16	ciarta (ENSAMXG00000035450) #17	mrps21 (ENSAMXG00000032876) #19	crabp2b (ENSAMXG00000032195) #20	scamp3 (ENSAMXG00000032081) #21	ENSAMXG00000042305 #22	ash1l (ENSAMXG00000009994) #23	lrrc71 (ENSAMXG00000031291) #24	setdb1a (ENSAMXG00000010030)	clk2a (ENSAMXG00000010041) #13	si:ch211-81a5.8 (ENSAMXG00000010045)	ENSAMXG00000039788	ENSAMXG00000036542	slc2a3a (ENSAMXG00000009319)	ENSAMXG00000029103	cacng6a (ENSAMXG00000030494)	cacng8a (ENSAMXG00000043635)	cacng7a (ENSAMXG00000029894)	ENSAMXG00000009395	GRIK5 (ENSAMXG00000014408)	ENSAMXG00000043063
Electric eel	MODERN SPECIES	59	si:dkey-266f7.9 (ENSEEEG00000006638)	ENSEEEG00000006640 #34	efna1a (ENSEEEG00000006642) #33	dpm3 (ENSEEEG00000006645) #32	trim46b (ENSEEEG00000006649) #31	s100a10a (ENSEEEG00000006673) #30	snx27a (ENSEEEG00000006678) #28	chrna11 (ENSEEEG00000006704) #27	ENSEEEG00000006713 #25	cers2a (ENSEEEG00000006778) #14	celf3a (ENSEEEG00000006785) #15	rprd2a (ENSEEEG00000006790) #16	mrps21 (ENSEEEG00000006801) #19	crabp2b (ENSEEEG00000006804) #20	scamp3 (ENSEEEG00000006822) #21	ENSEEEG00000006823 #22	lrrc71 (ENSEEEG00000006827) #24	setdb1a (ENSEEEG00000006828)	ENSEEEG00000006829	clk2a (ENSEEEG00000006851) #13	ENSEEEG00000007649	ndufv1 (ENSEEEG00000007653)	vamp1a (ENSEEEG00000007690)	IFFO1 (ENSEEEG00000007691)	ENSEEEG00000007706	ing4 (ENSEEEG00000007813)	FAM131B (ENSEEEG00000007815)	clcn1a (ENSEEEG00000007829)	ENSEEEG00000008475	necap1 (ENSEEEG00000008482)	epn1b (ENSEEEG00000008485)
Cyprinoidei	ANCESTRAL SPECIES	33	ENSGT00940000166681 #34	ENSGT00940000159919.b #33	ENSGT00390000008892 #32	ENSGT00940000158021.c #31	ENSGT00940000165795 #30	ENSGT00950000183212.C.c.a #28	ENSGT00940000164921.b #27	ENSGT00950000182891.b.b.a #25	ENSGT01030000234515.a.b.a.a.e #14	ENSGT00940000154716.gc.b #15	ENSGT00950000183094.a.n #16	ENSGT00390000018360.b #17	ENSGT00940000166610 #19	ENSGT00940000157619.a.b #20	ENSGT00940000160917 #21	ENSGT00940000157203.d #22	ENSGT00940000156698.c #23	ENSGT00440000034367 #24	ENSGT00940000157471.b	ENSGT00940000154947.k #13	ENSGT01060000248708.b	ENSGT00940000154743.A.a.b	ENSGT00390000010641.i.b	ENSGT00940000163756.c.a	ENSGT01030000235274.b	ENSGT01030000235274.a	ENSGT01010000223632	ENSGT00940000164382.b.a	ENSGT00510000046803.b.a.b.a	ENSGT00940000159033	ENSGT00950000183106.a.b.a
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	185	ENSGT00940000166681.a #34	ENSGT00940000159919.b.b #33	ENSGT00390000008892.a.b #32	ENSGT00940000158021.c.d #31	ENSGT00940000165795.g.b #30	ENSGT00950000183212.C.c.a.b #28	ENSGT00940000164921.b.e #27	ENSGT00950000182891.b.b.a #25	ENSGT01030000234515.a.b.a.a.e.b #14	ENSGT00940000154716.gc.b.b #15	ENSGT00950000183094.a.n.b #16	ENSGT00390000018360.b.b #17	ENSGT00940000166610.e.b #19	ENSGT00940000157619.a.b.a.a #20	ENSGT00940000160917.p #21	ENSGT00940000157203.d.a #22	ENSGT00940000156698.c.b #23	ENSGT00440000034367.a.b #24	ENSGT00940000157471.b.c	ENSGT00940000154947.k.f #13	ENSGT01060000248708.b.b	ENSGT00940000154743.A.a.b.b	ENSGT00390000010641.i.b.b	ENSGT00940000163756.c.a.h	ENSGT01030000235274.b.a	ENSGT01030000235274.a.b	ENSGT00510000046803.b.a.b.a.b	ENSGT00940000159033.j
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	38	rad21b (ENSCARG00000019793)	CSMD3 (ENSCARG00000019896)	ENSCARG00000020271	COL22A1 (ENSCARG00000020324)	kcnk9 (ENSCARG00000020351)	TRAPPC9 (ENSCARG00000020378)	rragcb (ENSCARG00000020462)	fhl3b (ENSCARG00000020478)	meaf6 (ENSCARG00000020488)	ENSCARG00000020508 ##15	rprd2a (ENSCARG00000020531) #16	ciarta (ENSCARG00000020546) #17	mrps21 (ENSCARG00000020549) #19	crabp2b (ENSCARG00000020553) #20	scamp3 (ENSCARG00000020559) #21	ENSCARG00000020574 #22	slc2a3a (ENSCARG00000020585)	clcn1a (ENSCARG00000020690)	ENSCARG00000021574	ing4 (ENSCARG00000021590)	IFFO1 (ENSCARG00000021620)	vamp1a (ENSCARG00000021633)	ENSCARG00000021644	ENSCARG00000021656	ENSCARG00000021677	ndufv1 (ENSCARG00000021898)	ENSCARG00000022844	si:ch211-81a5.8 (ENSCARG00000022865)	clk2a (ENSCARG00000022883) #13	setdb1a (ENSCARG00000022930)	lrrc71 (ENSCARG00000022956) #24
Goldfish	MODERN SPECIES	815														crabp2b (ENSCARG00000031543) #20	scamp3 (ENSCARG00000031551) #21	ENSCARG00000031567 #22	ash1l (ENSCARG00000031580) #23
Cyprininae_a	ANCESTRAL SPECIES	1	ENSGT00940000159919.b.b #33	ENSGT00390000008892.a.b #32	ENSGT00940000158021.c.d #31	ENSGT00940000165795.g.b #30	ENSGT00950000183212.C.c.a.b #28	ENSGT00940000164921.b.e #27	ENSGT00950000182891.b.b.a #25	ENSGT01030000234515.a.b.a.a.e.b #14	ENSGT00940000154716.gc.b.b #15	ENSGT00950000183094.a.n.b #16	ENSGT00390000018360.b.b #17	ENSGT00940000166610.e.b #19	ENSGT00940000157619.a.b.b #20	ENSGT00940000157619.a.b.a.a #20	ENSGT00940000160917.p #21	ENSGT00940000157203.d.a #22	ENSGT00940000156698.c.b #23	ENSGT00940000157471.b.c	ENSGT00940000154947.k.f #13	ENSGT01060000248708.b.b	ENSGT00940000154743.A.a.b.b	ENSGT00390000010641.i.b.b	ENSGT00940000163756.c.a.h	ENSGT01030000235274.b.a.b	ENSGT01030000235274.a.b	ENSGT00510000046803.b.a.b.a.b	ENSGT00940000159033.i.a	ENSGT00950000183106.a.b.a.b	ENSGT00940000157383.g.a.j.a.b	ENSGT00940000167696.b	ENSGT00940000160313.b
Common carp reference	MODERN SPECIES	31	si:dkey-266f7.9 (ENSCCRG00000067905)	ENSCCRG00000059719 #34	efna1a (ENSCCRG00000017809) #33	dpm3 (ENSCCRG00000068446) #32	trim46b (ENSCCRG00000042143) #31	s100a10a (ENSCCRG00000069788) #30	snx27a (ENSCCRG00000042297) #28	chrna11 (ENSCCRG00000006710) #27	ENSCCRG00000074680 #25	cers2a (ENSCCRG00000072257) #14	celf3a (ENSCCRG00000076770) #15	rprd2a (ENSCCRG00000068133) #16	mrps21 (ENSCCRG00000080584) #19	crabp2b (ENSCCRG00000048557) #20	scamp3 (ENSCCRG00000049033) #21	ENSCCRG00000007470 #22	ash1l (ENSCCRG00000076046) #23	setdb1a (ENSCCRG00000049021)	clk2a (ENSCCRG00000048580) #13	si:ch211-81a5.8 (ENSCCRG00000048562)	ENSCCRG00000076116	ndufv1 (ENSCCRG00000081798)	ENSCCRG00000048536	ENSCCRG00000048531	ENSCCRG00000048530	vamp1a (ENSCCRG00000064123)	ENSCCRG00000074568	ENSCCRG00000048485	ing4 (ENSCCRG00000048533)	ENSCCRG00000048534	clcn1a (ENSCCRG00000078740)
Cyprininae	ANCESTRAL SPECIES	307	ENSGT00390000008892.a.a #32	ENSGT00940000158021.c.c #31	ENSGT00940000165795.g.a #30	ENSGT00950000183212.C.c.a.a #28	ENSGT00940000164921.b.f #27	ENSGT00950000182891.b.b.b.b.a ##25	ENSGT01030000234515.a.b.a.a.e.a #14	ENSGT00940000154716.gc.b.a #15	ENSGT00950000183094.a.n.a #16	ENSGT00390000018360.b.a #17	ENSGT00940000166610.e.a #19	ENSGT00940000157619.a.b.b #20	ENSGT00940000166610.f #19	ENSGT00940000157619.a.b.a.b #20	ENSGT00940000160917.o #21	ENSGT00940000157203.d.b #22	ENSGT00940000156698.c.a #23	ENSGT00440000034367.a.a #24	ENSGT00940000157471.b.d	ENSGT00940000154947.k.e #13	ENSGT01060000248708.b.a	ENSGT00940000154743.A.a.b.a	ENSGT00390000010641.i.b.a	ENSGT00940000163756.c.a.g	ENSGT01010000223632	ENSGT00940000164382.b.a.j	ENSGT00510000046803.b.a.b.a.a	ENSGT00940000159033.i.b	ENSGT00950000183106.a.b.a.a	ENSGT00940000157383.g.a.j.a.a	ENSGT00940000167696.a
Cyprininae_a	ANCESTRAL SPECIES	52	ENSGT00390000008892.b #32	ENSGT00390000008892.a.a #32	ENSGT00940000158021.c.c #31	ENSGT00940000165795.g.a #30	ENSGT00950000183212.C.c.a.a #28	ENSGT00940000164921.b.f #27	ENSGT00950000182891.b.b.b.b.a ##25	ENSGT01030000234515.a.b.a.a.e.a #14	ENSGT00940000154716.gc.b.a #15	ENSGT00950000183094.a.n.a #16	ENSGT00390000018360.b.a #17	ENSGT00940000166610.e.a #19	ENSGT00940000166610.f #19	ENSGT00940000157619.a.b.a.b #20	ENSGT00940000160917.o #21	ENSGT00940000157203.d.b #22	ENSGT00940000156698.c.a #23	ENSGT00440000034367.a.a #24	ENSGT00940000157471.b.d	ENSGT00940000154947.k.e #13	ENSGT01060000248708.b.a	ENSGT00940000154743.A.a.b.a	ENSGT00390000010641.i.b.a	ENSGT00940000163756.c.a.g	ENSGT01010000223632	ENSGT00940000164382.b.a.j	ENSGT00510000046803.b.a.b.a.a	ENSGT00940000159033.i.b	ENSGT00950000183106.a.b.a.a	ENSGT00940000157383.g.a.j.b	ENSGT00940000157383.g.a.j.a.a
Common carp reference	MODERN SPECIES	12	ENSCCRG00000077525 #34	dpm3 (ENSCCRG00000065825) #32	trim46b (ENSCCRG00000035422) #31	s100a10a (ENSCCRG00000075828) #30	snx27a (ENSCCRG00000035444) #28	chrna11 (ENSCCRG00000056448) #27	ENSCCRG00000075527 #25	cers2a (ENSCCRG00000024592) #14	ENSCCRG00000060057	celf3a (ENSCCRG00000024042) #15	rprd2a (ENSCCRG00000024017) #16	ciarta (ENSCCRG00000049041) #17	mrps21 (ENSCCRG00000067203) #19	crabp2b (ENSCCRG00000070701) #20	scamp3 (ENSCCRG00000060760) #21	ENSCCRG00000062250 #22	ash1l (ENSCCRG00000048996) #23	lrrc71 (ENSCCRG00000048989) #24	setdb1a (ENSCCRG00000048984)	clk2a (ENSCCRG00000053694) #13	si:ch211-81a5.8 (ENSCCRG00000057966)	ENSCCRG00000071140	ndufv1 (ENSCCRG00000017955)	ENSCCRG00000008447	ENSCCRG00000048537	ENSCCRG00000076586	ENSCCRG00000055597	ENSCCRG00000048473	ENSCCRG00000034649	clcn1a (ENSCCRG00000043732)	ENSCCRG00000030733
Zebrafish	MODERN SPECIES	10	efna1a (ENSDARG00000030326) #33	s100a10a (ENSDARG00000037425) #30	dpm3 (ENSDARG00000058650) #32	trim46b (ENSDARG00000058649) #31	snx27a (ENSDARG00000033804) #28	chrna11 (ENSDARG00000037427) #27	rps27.1 (ENSDARG00000023298) ##25	cers2a (ENSDARG00000013704) #14	ENSDARG00000103224	celf3a (ENSDARG00000034668) #15	rprd2a (ENSDARG00000058089) #16	ciarta (ENSDARG00000058094) #17	mrps21 (ENSDARG00000070985) #19	crabp2b (ENSDARG00000030449) #20	scamp3 (ENSDARG00000016765) #21	ENSDARG00000062900 #22	ash1l (ENSDARG00000070981) #23	lrrc71 (ENSDARG00000036412) #24	setdb1a (ENSDARG00000041243)	clk2a (ENSDARG00000062954) #13	si:ch211-81a5.8 (ENSDARG00000070972)	ENSDARG00000027192	ndufv1 (ENSDARG00000036438)	ENSDARG00000062962	si:rp71-15k1.1 (ENSDARG00000070964)	si:ch73-15n24.1 (ENSDARG00000079901)	ENSDARG00000070960	ENSDARG00000070959	vamp1a (ENSDARG00000031283)	IFFO1 (ENSDARG00000062976)	ing4 (ENSDARG00000030716)