Euteleostomi	ANCESTRAL SPECIES	465																ENSGT00950000182846.a.a.a.a.a #22	ENSGT00950000182846.a.a.a.a.b ##22	ENSGT00390000003897 #23	ENSGT00940000153588.b #25	ENSGT00390000013740 #34	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT01060000248768
Sarcopterygii	ANCESTRAL SPECIES	265																ENSGT00950000182846.a.a.a.a.a #22	ENSGT00950000182846.a.a.a.a.b ##22	ENSGT00390000003897 #23	ENSGT00940000153588.b #25	ENSGT00390000003937	ENSGT00940000161880	ENSGT00940000155445	ENSGT00940000160765	ENSGT00940000155311.C	ENSGT00940000164248	ENSGT00950000182846.a.b ##22	ENSGT00390000013740 #34	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00940000161969
Tetrapoda	ANCESTRAL SPECIES	221											ENSGT01050000244850.A.a #16	ENSGT00390000004735.C ##17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00950000182846.a.a.a.a.b ##22	ENSGT00390000003897 #23	ENSGT00940000153588.b #25
Amniota	ANCESTRAL SPECIES	40							ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802 #9	ENSGT01050000244850.A.a #16	ENSGT00390000004735.C ##17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b #23	ENSGT00940000153588.b #25	ENSGT00950000182846.a.a.a.a.b ##22	ENSGT00390000003897.s.a ##23	ENSGT00390000002034 #24	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00940000161969	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT01030000234549.a.a.a.a.a.a ##28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33
Mammalia	ANCESTRAL SPECIES	46						ENSGT00940000165180	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802 #9	ENSGT01050000244850.A.a #16	ENSGT00390000004735.C ##17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.a ##23	ENSGT00950000182846.a.a.a.a.b ##22	ENSGT00390000003897.s.b #23	ENSGT00940000153588.b #25	ENSGT00390000002034 #24	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00940000161969	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT01030000234549.a.a.a.a.a.a ##28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33
Theria	ANCESTRAL SPECIES	46	ENSGT00510000047092 #7	ENSGT00940000159803 #8	ENSGT01030000240148	ENSGT00390000000950.c.a	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802 #9	ENSGT01050000244850.A.a #16	ENSGT00390000004735.C ##17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.a ##23	ENSGT00950000182846.a.a.a.a.b ##22	ENSGT00390000003897.s.b #23	ENSGT00940000153588.b #25	ENSGT00390000002034 #24	ENSGT00940000154471.a.a	ENSGT00940000161969	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00940000166196	ENSGT00390000013740 #34
Eutheria	ANCESTRAL SPECIES	16	ENSGT01100000263574.b.i.a	ENSGT01100000263574.b.i.b	ENSGT01100000263574.b.j	ENSGT01050000244815.B.a.a	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.C ##17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00940000153588.b #25	ENSGT00390000002034 #24	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00940000166196	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37
Boreoeutheria	ANCESTRAL SPECIES	11	ENSGT00940000158744	ENSGT00510000047092 #7	ENSGT00940000159803 #8	ENSGT00410000025802.h #9	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.a.b ##23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00910000146917 #31	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37
Euarchontoglires	ANCESTRAL SPECIES	11	ENSGT00410000025802.g.b ##9	ENSGT01050000244815.B.a.a	ENSGT01030000238159	ENSGT00410000025802.h #9	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00910000146917 #31	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37
Primates	ANCESTRAL SPECIES	23	ENSGT00940000158744	ENSGT00510000047092 #7	ENSGT00940000159803 #8	ENSGT00410000025802.h #9	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00910000146917 #31	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37
Haplorrhini	ANCESTRAL SPECIES	33	ENSGT00940000158744	ENSGT00510000047092 #7	ENSGT00940000159803 #8	ENSGT00410000025802.h #9	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00910000146917 #31	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37
Simiiformes	ANCESTRAL SPECIES	9	ENSGT00510000047092 #7	ENSGT00940000159803 #8	ENSGT00410000025802.h.b #9	ENSGT00410000025802.h.a ##9	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00910000147052	ENSGT00910000146917 #31	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36
Platyrrhini	ANCESTRAL SPECIES	42	ENSGT00940000158744	ENSGT00510000047092 #7	ENSGT00940000159803 #8	ENSGT00410000025802.h.b #9	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b.n #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426.a #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00910000147052	ENSGT00910000146917 #31	ENSGT00940000160502 #32	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37
Cebidae	ANCESTRAL SPECIES	27	ENSGT00940000158744	ENSGT00510000047092 #7	ENSGT00940000159803 #8	ENSGT00410000025802.h.b #9	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b.n #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426.a #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00910000147052	ENSGT00910000146917 #31	ENSGT00940000160502 #32	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37
Cebidae_a	ANCESTRAL SPECIES	78	ENSGT00940000158744	ENSGT00510000047092 #7	ENSGT00940000159803 #8	ENSGT00410000025802.h.b #9	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b.n #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426.a #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00910000147052	ENSGT00910000146917 #31	ENSGT00940000160502 #32	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37
Bolivian squirrel monkey	MODERN SPECIES	236	DKC1 (ENSSBOG00000033746) #7	GAB3 (ENSSBOG00000027441) #8	ENSSBOG00000031845 #9	IKBKG (ENSSBOG00000033453) #10	G6PD (ENSSBOG00000003239) #11	FAM3A (ENSSBOG00000030279) #12	SLC10A3 (ENSSBOG00000027728) #13	UBL4A (ENSSBOG00000030369) #14	LAGE3 (ENSSBOG00000024470) #15	PLXNA3 (ENSSBOG00000034877) #16	FAM50A (ENSSBOG00000029861) #17	GDI1 (ENSSBOG00000021247) #18	ATP6AP1 (ENSSBOG00000027327) #19	TAFAZZIN (ENSSBOG00000029961) #20	ENSSBOG00000033124 #21	DNASE1L1 (ENSSBOG00000028977) #22	ENSSBOG00000025724 #23	EMD (ENSSBOG00000027560) #24	FLNA (ENSSBOG00000035541) #25	TKTL1 (ENSSBOG00000020176) #26	TEX28 (ENSSBOG00000035728) #27	ENSSBOG00000022236 #28	ENSSBOG00000025722 #29	MECP2 (ENSSBOG00000024999) #30	ENSSBOG00000017747 #31	IRAK1 (ENSSBOG00000018599) #32	HCFC1 (ENSSBOG00000034222) #33	RENBP (ENSSBOG00000034728) #34	ENSSBOG00000020071 #35	ARHGAP4 (ENSSBOG00000023946) #36	AVPR2 (ENSSBOG00000031595) #37
Capuchin	MODERN SPECIES	862			ENSCCAG00000030506 #9	IKBKG (ENSCCAG00000030204) #10	G6PD (ENSCCAG00000033900) #11	ENSCCAG00000025941	FAM3A (ENSCCAG00000030432) #12	SLC10A3 (ENSCCAG00000020474) #13	UBL4A (ENSCCAG00000033285) #14	LAGE3 (ENSCCAG00000021965) #15	PLXNA3 (ENSCCAG00000029210) #16	FAM50A (ENSCCAG00000022089) #17	GDI1 (ENSCCAG00000023267) #18	ATP6AP1 (ENSCCAG00000026799) #19	TAZ (ENSCCAG00000033091) #20	DNASE1L1 (ENSCCAG00000038109) #22	ENSCCAG00000024992 ##23
Marmoset	MODERN SPECIES	78	MPP1 (ENSCJAG00000004227)	DKC1 (ENSCJAG00000004210) #7	ENSCJAG00000082602	GAB3 (ENSCJAG00000016753) #8	IKBKG (ENSCJAG00000016764) #10	G6PD (ENSCJAG00000016775) #11	FAM3A (ENSCJAG00000016787) #12	SLC10A3 (ENSCJAG00000077479) #13	UBL4A (ENSCJAG00000074416) #14	LAGE3 (ENSCJAG00000041329) #15	PLXNA3 (ENSCJAG00000016816) #16	FAM50A (ENSCJAG00000063509) #17	GDI1 (ENSCJAG00000016910) #18	ATP6AP1 (ENSCJAG00000040642) #19	ENSCJAG00000016995 #20	DNASE1L1 (ENSCJAG00000011800) #22	ENSCJAG00000011822 ##23	EMD (ENSCJAG00000011853) #24	FLNA (ENSCJAG00000034881) #25	TKTL1 (ENSCJAG00000014368) #26	TEX28 (ENSCJAG00000042631) #27	ENSCJAG00000014412 #28	MECP2 (ENSCJAG00000016796) #30	IRAK1 (ENSCJAG00000014452) #32	RENBP (ENSCJAG00000014500) #34	NAA10 (ENSCJAG00000014506) #35	AVPR2 (ENSCJAG00000011022) #37	ARHGAP4 (ENSCJAG00000011008) #36	L1CAM (ENSCJAG00000011023)	ENSCJAG00000022809	ENSCJAG00000074256
Mas night monkey	MODERN SPECIES	1311	F8 (ENSANAG00000025258)	MPP1 (ENSANAG00000034369)	DKC1 (ENSANAG00000022732) #7	GAB3 (ENSANAG00000032427) #8	IKBKG (ENSANAG00000032209) #10	G6PD (ENSANAG00000031927) #11	FAM3A (ENSANAG00000028348) #12	SLC10A3 (ENSANAG00000031182) #13	ENSANAG00000029762 #14	LAGE3 (ENSANAG00000032507) #15	PLXNA3 (ENSANAG00000027264) #16	FAM50A (ENSANAG00000031398) #17	GDI1 (ENSANAG00000028381) #18	ATP6AP1 (ENSANAG00000036139) #19	TAFAZZIN (ENSANAG00000022392) #20	DNASE1L1 (ENSANAG00000019417) #22	ENSANAG00000036053 ##23
Catarrhini	ANCESTRAL SPECIES	12	ENSGT00940000159803 #8	ENSGT00410000025802.h.a.b ##9	ENSGT00410000025802.h.a.a ##9	ENSGT00390000002566	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a.m #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000003897.s.b.a.a.b.e.a ##23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00910000147052	ENSGT00910000146917 #31	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35
Hominoidea	ANCESTRAL SPECIES	29	ENSGT00940000159803 #8	ENSGT00410000025802.h.a.b ##9	ENSGT00410000025802.h.a.a ##9	ENSGT00390000002566	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a.m #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.a.b.e.a ##23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00910000147052	ENSGT00910000146917 #31	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36
Hominidae	ANCESTRAL SPECIES	8	ENSGT00940000159803 #8	ENSGT00410000025802.h.b.b #9	ENSGT00410000025802.h.a.a ##9	ENSGT00390000002566	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a.m #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.a.b.f ##23	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b.f #28	ENSGT00530000063687.b.b.b #30	ENSGT00910000147052	ENSGT00910000146917 #31	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	9	ENSGT00410000025802.h.b.b #9	ENSGT00530000063801.a.n	ENSGT00410000025802.h.b.a #9	ENSGT00410000025802.h.a.a ##9	ENSGT00530000063808.a #10	ENSGT00530000063435.a.i #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a.m #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.a.b.f ##23	ENSGT00530000063687.b.b.b.f #30	ENSGT00390000003897.s.b.a.a.b.e.a ##23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b.f #28	ENSGT00530000063687.b.b.b.e #30	ENSGT00910000147052	ENSGT00910000146917 #31	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34
Homo/Pan group	ANCESTRAL SPECIES	9	ENSGT00410000025802.h.b.b #9	ENSGT00530000063801.a.n	ENSGT00410000025802.h.b.a #9	ENSGT00410000025802.h.a.a ##9	ENSGT00530000063808.a #10	ENSGT00530000063435.a.i #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a.m #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.a.b.f ##23	ENSGT00530000063687.b.b.b.f #30	ENSGT00390000003897.s.b.b ##23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b.f #28	ENSGT00530000063687.b.b.b.e #30	ENSGT00910000147052	ENSGT00910000146917 #31	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34
Pan	ANCESTRAL SPECIES	43	ENSGT00510000047092 #7	ENSGT00940000159803 #8	ENSGT00410000025802.h.b.b #9	ENSGT00390000002566	ENSGT00530000063808.a #10	ENSGT00530000063435.a.i #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a.m #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22
Chimpanzee	MODERN SPECIES	972	ENSPTRG00000040429 ##9	ENSPTRG00000022445 #9	ENSPTRG00000044790	ENSPTRG00000050406	IKBKG (ENSPTRG00000040677) #10	G6PD (ENSPTRG00000022443) #11	FAM3A (ENSPTRG00000022442) #12	SLC10A3 (ENSPTRG00000051548) #13	UBL4A (ENSPTRG00000022440) #14	LAGE3 (ENSPTRG00000022439) #15	PLXNA3 (ENSPTRG00000022438) #16	FAM50A (ENSPTRG00000022437) #17	GDI1 (ENSPTRG00000028169) #18	ATP6AP1 (ENSPTRG00000022435) #19	TAFAZZIN (ENSPTRG00000022434) #20	DNASE1L1 (ENSPTRG00000042704) #22	RPL10 (ENSPTRG00000043378) ##23	TKTL1 (ENSPTRG00000022429) #26	TEX28 (ENSPTRG00000022426) #27	OPN1LW (ENSPTRG00000022427) #28	MECP2 (ENSPTRG00000048003) #30	ENSPTRG00000047302	ENSPTRG00000046201 #31	IRAK1 (ENSPTRG00000022423) #32	ENSPTRG00000022422	HCFC1 (ENSPTRG00000022421) #33	RENBP (ENSPTRG00000022420) #34	NAA10 (ENSPTRG00000022419) #35	ARHGAP4 (ENSPTRG00000033931) #36	AVPR2 (ENSPTRG00000033849) #37	ENSPTRG00000039921
Bonobo	MODERN SPECIES	369	DKC1 (ENSPPAG00000023820) #7	GAB3 (ENSPPAG00000033506) #8	ENSPPAG00000030022 ##9	ENSPPAG00000024171	IKBKG (ENSPPAG00000019041) #10	G6PD (ENSPPAG00000030117) #11	ENSPPAG00000028567 #12	SLC10A3 (ENSPPAG00000036137) #13	ENSPPAG00000035975 #14	LAGE3 (ENSPPAG00000028018) #15	PLXNA3 (ENSPPAG00000037363) #16	ENSPPAG00000043116 #17	GDI1 (ENSPPAG00000027756) #18	ATP6AP1 (ENSPPAG00000036293) #19	TAFAZZIN (ENSPPAG00000036682) #20	DNASE1L1 (ENSPPAG00000012889) #22	ENSPPAG00000034160 ##23	MECP2 (ENSPPAG00000034020) #30	ENSPPAG00000042175	IRAK1 (ENSPPAG00000040186) #32	TMEM187 (ENSPPAG00000007444)	HCFC1 (ENSPPAG00000044057) #33	RENBP (ENSPPAG00000035978) #34	ENSPPAG00000037021 #35	ARHGAP4 (ENSPPAG00000039545) #36	AVPR2 (ENSPPAG00000034862) #37	L1CAM (ENSPPAG00000042079)	ENSPPAG00000001011	PDZD4 (ENSPPAG00000038351)	SSR4 (ENSPPAG00000041018)	IDH3G (ENSPPAG00000041999)
Human	MODERN SPECIES	1827	GAB3 (ENSG00000160219) #8	CTAG2 (ENSG00000126890) ##9	CTAG1B (ENSG00000184033) ##9	CTAG1A (ENSG00000268651) ##9	IKBKG (ENSG00000269335) #10	G6PD (ENSG00000160211) #11	FAM3A (ENSG00000071889) #12	SLC10A3 (ENSG00000126903) #13	UBL4A (ENSG00000102178) #14	LAGE3 (ENSG00000196976) #15	PLXNA3 (ENSG00000130827) #16	FAM50A (ENSG00000071859) #17	GDI1 (ENSG00000203879) #18	ATP6AP1 (ENSG00000071553) #19	TAFAZZIN (ENSG00000102125) #20	DNASE1L1 (ENSG00000013563) #22	RPL10 (ENSG00000147403) ##23	EMD (ENSG00000102119) #24	FLNA (ENSG00000196924) #25	TKTL1 (ENSG00000007350) #26	TEX28 (ENSG00000278057) #27	OPN1MW3 (ENSG00000269433) #28	OPN1MW2 (ENSG00000166160) #28	OPN1MW (ENSG00000268221) #28	OPN1LW (ENSG00000102076) #28	MECP2 (ENSG00000169057) #30	IRAK1 (ENSG00000184216) #32	TMEM187 (ENSG00000177854)	HCFC1 (ENSG00000172534) #33	RENBP (ENSG00000102032) #34	NAA10 (ENSG00000102030) #35
Gorilla	MODERN SPECIES	523	ENSGGOG00000043272 ##9	ENSGGOG00000022830 #9	ENSGGOG00000040976	ENSGGOG00000025927	IKBKG (ENSGGOG00000004896) #10	G6PD (ENSGGOG00000004890) #11	ENSGGOG00000005270 #12	SLC10A3 (ENSGGOG00000013520) #13	ENSGGOG00000013509 #14	LAGE3 (ENSGGOG00000013507) #15	PLXNA3 (ENSGGOG00000013493) #16	ENSGGOG00000013484 #17	GDI1 (ENSGGOG00000013474) #18	ATP6AP1 (ENSGGOG00000013466) #19	TAZ (ENSGGOG00000011947) #20	DNASE1L1 (ENSGGOG00000000132) #22	ENSGGOG00000000131 ##23	EMD (ENSGGOG00000009388) #24	FLNA (ENSGGOG00000004199) #25	TKTL1 (ENSGGOG00000004191) #26	TEX28 (ENSGGOG00000004188) #27	ENSGGOG00000004184 #28	MECP2 (ENSGGOG00000042467) #30	ENSGGOG00000041822	ENSGGOG00000040298 #31	IRAK1 (ENSGGOG00000000220) #32	TMEM187 (ENSGGOG00000008146)	HCFC1 (ENSGGOG00000009800) #33	RENBP (ENSGGOG00000009791) #34	NAA10 (ENSGGOG00000009788) #35	ARHGAP4 (ENSGGOG00000009770) #36
Orangutan	MODERN SPECIES	242	DKC1 (ENSPPYG00000020892) #7	GAB3 (ENSPPYG00000020891) #8	CTAG2 (ENSPPYG00000020890) ##9	ENSPPYG00000020888 ##9	ENSPPYG00000020887	IKBKG (ENSPPYG00000020886) #10	G6PD (ENSPPYG00000020885) #11	FAM3A (ENSPPYG00000020884) #12	SLC10A3 (ENSPPYG00000020883) #13	UBL4A (ENSPPYG00000020882) #14	LAGE3 (ENSPPYG00000033247) #15	FAM50A (ENSPPYG00000020879) #17	GDI1 (ENSPPYG00000020878) #18	ATP6AP1 (ENSPPYG00000020877) #19	TAFAZZIN (ENSPPYG00000020876) #20	DNASE1L1 (ENSPPYG00000020875) #22	RPL10 (ENSPPYG00000020874) #23	EMD (ENSPPYG00000020873) #24	FLNA (ENSPPYG00000020871) #25	TKTL1 (ENSPPYG00000020870) #26	TEX28 (ENSPPYG00000020869) #27	ENSPPYG00000020867 #28	MECP2 (ENSPPYG00000020866) #30	IRAK1 (ENSPPYG00000020865) #32	TMEM187 (ENSPPYG00000020864)	HCFC1 (ENSPPYG00000020863) #33	RENBP (ENSPPYG00000020862) #34	NAA10 (ENSPPYG00000020861) #35	ARHGAP4 (ENSPPYG00000020860) #36	ENSPPYG00000020859 #37	L1CAM (ENSPPYG00000020858)
Gibbon	MODERN SPECIES	449	ENSNLEG00000014423	MPP1 (ENSNLEG00000014358)	DKC1 (ENSNLEG00000014323) #7	GAB3 (ENSNLEG00000014318) #8	ENSNLEG00000014311 #10	ENSNLEG00000014300 #11	FAM3A (ENSNLEG00000030950) #12	SLC10A3 (ENSNLEG00000014293) #13	ENSNLEG00000014292 #14	LAGE3 (ENSNLEG00000028687) #15	PLXNA3 (ENSNLEG00000014273) #16	FAM50A (ENSNLEG00000014266) #17	GDI1 (ENSNLEG00000014222) #18	ATP6AP1 (ENSNLEG00000014184) #19	ENSNLEG00000014176 #20	DNASE1L1 (ENSNLEG00000014149) #22	ENSNLEG00000028143 ##23	EMD (ENSNLEG00000014117) #24	FLNA (ENSNLEG00000013842) #25	TKTL1 (ENSNLEG00000013813) #26	TEX28 (ENSNLEG00000013808) #27	ENSNLEG00000013787 #28	ENSNLEG00000013783 #30	ENSNLEG00000013767 #32	TMEM187 (ENSNLEG00000013763)	HCFC1 (ENSNLEG00000026624) #33	ENSNLEG00000013753 #34	NAA10 (ENSNLEG00000013724) #35	ARHGAP4 (ENSNLEG00000013678) #36	AVPR2 (ENSNLEG00000013671) #37	ENSNLEG00000031864
Cercopithecidae	ANCESTRAL SPECIES	37	ENSGT00410000025802.h.a.b ##9	ENSGT00410000025802.h.a.a ##9	ENSGT00390000002566	ENSGT00530000063808.a #10	ENSGT00910000147580	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a.m #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23
Cercopithecinae	ANCESTRAL SPECIES	25	ENSGT00410000025802.h.a.b ##9	ENSGT00410000025802.h.a.a ##9	ENSGT00390000002566	ENSGT00530000063808.a #10	ENSGT00910000147580	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a.m #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23
Vervet Monkey	MODERN SPECIES	197												FAM50A (ENSCSAG00000017718) #17	GDI1 (ENSCSAG00000017723) #18	ATP6AP1 (ENSCSAG00000017725) #19	TAFAZZIN (ENSCSAG00000017730) #20	DNASE1L1 (ENSCSAG00000017731) #22
Cercopithecinae_a	ANCESTRAL SPECIES	11	ENSGT00410000025802.h.a.b ##9	ENSGT00410000025802.h.a.a ##9	ENSGT00390000002566	ENSGT00530000063808.a #10	ENSGT00910000147580	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a.m #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00940000153588.b #25	ENSGT00390000002034 #24	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00910000147052	ENSGT00910000146917 #31	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36
Cercopithecinae_b	ANCESTRAL SPECIES	51	ENSGT00940000153588.b #25	ENSGT00390000002034 #24	ENSGT00390000002566	ENSGT00530000063808.a #10	ENSGT00910000147580	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a.m #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.a.b.e.a ##23
Cercopithecinae_d	ANCESTRAL SPECIES	195			ENSGT00390000002566	ENSGT00530000063808.a #10	ENSGT00910000147580	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a.m #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23
Sooty mangabey	MODERN SPECIES	567					ENSCATG00000021841	G6PD (ENSCATG00000009953) #11	FAM3A (ENSCATG00000022515) #12	SLC10A3 (ENSCATG00000032881) #13	UBL4A (ENSCATG00000036850) #14	LAGE3 (ENSCATG00000025654) #15	PLXNA3 (ENSCATG00000031009) #16	FAM50A (ENSCATG00000032169) #17	GDI1 (ENSCATG00000031684) #18	ATP6AP1 (ENSCATG00000039938) #19	TAFAZZIN (ENSCATG00000034866) #20	DNASE1L1 (ENSCATG00000014042) #22	ENSCATG00000030970 #23
Drill	MODERN SPECIES	361			ENSMLEG00000009651	ENSMLEG00000037003	IKBKG (ENSMLEG00000032380) #10	G6PD (ENSMLEG00000040869) #11	FAM3A (ENSMLEG00000031424) #12	SLC10A3 (ENSMLEG00000031363) #13	UBL4A (ENSMLEG00000029271) #14	LAGE3 (ENSMLEG00000031787) #15	PLXNA3 (ENSMLEG00000039715) #16	FAM50A (ENSMLEG00000034206) #17	GDI1 (ENSMLEG00000014459) #18	ATP6AP1 (ENSMLEG00000026333) #19	TAFAZZIN (ENSMLEG00000041537) #20	DNASE1L1 (ENSMLEG00000042325) #22	ENSMLEG00000025660 #23
Olive baboon	MODERN SPECIES	792	RENBP (ENSPANG00000008961) #34	HCFC1 (ENSPANG00000024276) #33	TMEM187 (ENSPANG00000050796)	IRAK1 (ENSPANG00000015781) #32	MECP2 (ENSPANG00000011691) #30	OPN1LW (ENSPANG00000011135) #28	TEX28 (ENSPANG00000041590) #27	TKTL1 (ENSPANG00000011938) #26	SLC10A3 (ENSPANG00000014876) #13	UBL4A (ENSPANG00000010838) #14	LAGE3 (ENSPANG00000021408) #15	PLXNA3 (ENSPANG00000022718) #16	GDI1 (ENSPANG00000023322) #18	ATP6AP1 (ENSPANG00000012092) #19	TAFAZZIN (ENSPANG00000023866) #20	DNASE1L1 (ENSPANG00000026075) #22	RPL10 (ENSPANG00000008309) ##23	FLNA (ENSPANG00000025614) #25	ENSPANG00000046902	SMIM9 (ENSPANG00000014914)	MPP1 (ENSPANG00000013144)	DKC1 (ENSPANG00000011978) #7	GAB3 (ENSPANG00000004006) #8	F8 (ENSPANG00000010602)	FUNDC2 (ENSPANG00000004381)	CMC4 (ENSPANG00000017783)	MTCP1 (ENSPANG00000012244)	BRCC3 (ENSPANG00000010904)	RAB39B (ENSPANG00000008960)	TMLHE (ENSPANG00000024415)	CLIC2 (ENSPANG00000008414)
Macaca	ANCESTRAL SPECIES	13	ENSGT00940000159803 #8	ENSGT00410000025802.h.a.b ##9	ENSGT00410000025802.h.a.a ##9	ENSGT00390000002566	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a.m #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00940000153588.b #25	ENSGT00390000002034 #24	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00910000147052	ENSGT00910000146917 #31	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36
Pig-tailed macaque	MODERN SPECIES	403						G6PD (ENSMNEG00000031229) #11	FAM3A (ENSMNEG00000034258) #12	SLC10A3 (ENSMNEG00000042913) #13	UBL4A (ENSMNEG00000039513) #14	LAGE3 (ENSMNEG00000044542) #15	PLXNA3 (ENSMNEG00000029520) #16	FAM50A (ENSMNEG00000033378) #17	GDI1 (ENSMNEG00000029142) #18	ATP6AP1 (ENSMNEG00000040534) #19	TAFAZZIN (ENSMNEG00000038446) #20	DNASE1L1 (ENSMNEG00000032874) #22	ENSMNEG00000038094 #23	FLNA (ENSMNEG00000040468) #25	EMD (ENSMNEG00000042917) #24	TKTL1 (ENSMNEG00000045070) #26	TEX28 (ENSMNEG00000032132) #27
Macaca_a	ANCESTRAL SPECIES	11	ENSGT00940000159803 #8	ENSGT00410000025802.h.a.b ##9	ENSGT00410000025802.h.a.a ##9	ENSGT00530000063808.a #10	ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.b.a.b.b.b	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a.m #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00940000153588.b #25	ENSGT00390000002034 #24	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506
Crab-eating macaque	MODERN SPECIES	175	ENSMFAG00000045993	FUNDC2 (ENSMFAG00000038031)	F8 (ENSMFAG00000039948)	ENSMFAG00000060522	IKBKG (ENSMFAG00000032230) #10	G6PD (ENSMFAG00000043207) #11	FAM3A (ENSMFAG00000041814) #12	SLC10A3 (ENSMFAG00000035989) #13	UBL4A (ENSMFAG00000000884) #14	LAGE3 (ENSMFAG00000004038) #15	PLXNA3 (ENSMFAG00000040837) #16	FAM50A (ENSMFAG00000021581) #17	GDI1 (ENSMFAG00000037198) #18	ATP6AP1 (ENSMFAG00000003619) #19	TAFAZZIN (ENSMFAG00000028691) #20	DNASE1L1 (ENSMFAG00000038787) #22	ENSMFAG00000040824 ##23	FLNA (ENSMFAG00000035790) #25	EMD (ENSMFAG00000045316) #24	TKTL1 (ENSMFAG00000031072) #26	ENSMFAG00000059786 #27	ENSMFAG00000039596 #27	ENSMFAG00000043960 #28	ENSMFAG00000049901	MECP2 (ENSMFAG00000033178) #30	IRAK1 (ENSMFAG00000042818) #32	HCFC1 (ENSMFAG00000035763) #33	RENBP (ENSMFAG00000044051) #34	NAA10 (ENSMFAG00000044161) #35	ARHGAP4 (ENSMFAG00000038733) #36	AVPR2 (ENSMFAG00000043716) #37
Rhesus	MODERN SPECIES	327	ENSMMUG00000051337	IKBKG (ENSMMUG00000017277) #10	ENSMMUG00000051483	ENSMMUG00000017405 ##9	ENSMMUG00000052573 ##9	G6PD (ENSMMUG00000017409) #11	FAM3A (ENSMMUG00000009012) #12	ENSMMUG00000063935	UBL4A (ENSMMUG00000009015) #13	LAGE3 (ENSMMUG00000040340) #15	PLXNA3 (ENSMMUG00000005507) #16	FAM50A (ENSMMUG00000005505) #17	GDI1 (ENSMMUG00000005502) #18	ATP6AP1 (ENSMMUG00000005501) #19	TAFAZZIN (ENSMMUG00000005498) #20	DNASE1L1 (ENSMMUG00000050873) #22	RPL10 (ENSMMUG00000005494) #23	FLNA (ENSMMUG00000013668) #25	EMD (ENSMMUG00000013678) #24	TKTL1 (ENSMMUG00000013667) #26	ENSMMUG00000050314 #27	ENSMMUG00000054361 #28	ENSMMUG00000055487 #27	ENSMMUG00000006166 #28	MECP2 (ENSMMUG00000018704) #30	IRAK1 (ENSMMUG00000018703) #32	TMEM187 (ENSMMUG00000005132)	HCFC1 (ENSMMUG00000000319) #33	RENBP (ENSMMUG00000000320) #34	NAA10 (ENSMMUG00000000322) #35	ARHGAP4 (ENSMMUG00000000323) #36
Rhinopithecus	ANCESTRAL SPECIES	316	ENSGT00410000025802.h.a.b ##9	ENSGT00410000025802.h.a.a ##9	ENSGT00390000002566	ENSGT00530000063808.a #10	ENSGT00910000147580	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a.m #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23
Golden snub-nosed monkey	MODERN SPECIES	1454	CTAG2 (ENSRROG00000025938) ##9	ENSRROG00000034699 ##9	ENSRROG00000013818	ENSRROG00000035084	IKBKG (ENSRROG00000008677) #10	G6PD (ENSRROG00000033216) #11	ENSRROG00000033119	FAM3A (ENSRROG00000043376) #12	SLC10A3 (ENSRROG00000044112) #13	UBL4A (ENSRROG00000006560) #14	LAGE3 (ENSRROG00000012840) #15	PLXNA3 (ENSRROG00000044893) #16	FAM50A (ENSRROG00000038239) #17	ATP6AP1 (ENSRROG00000026809) #19	TAFAZZIN (ENSRROG00000037988) #20	DNASE1L1 (ENSRROG00000037526) #22	ENSRROG00000019247 #23
Black snub-nosed monkey	MODERN SPECIES	1888	ENSRBIG00000030147 ##9	ENSRBIG00000027585	IKBKG (ENSRBIG00000031684) #10	ENSRBIG00000029055	G6PD (ENSRBIG00000030157) #11	ENSRBIG00000028634	FAM3A (ENSRBIG00000025198) #12	SLC10A3 (ENSRBIG00000034698) #13	UBL4A (ENSRBIG00000023877) #14	ENSRBIG00000034128	PLXNA3 (ENSRBIG00000035203) #16	FAM50A (ENSRBIG00000037965) #17	GDI1 (ENSRBIG00000042799) #18	ATP6AP1 (ENSRBIG00000036700) #19	TAFAZZIN (ENSRBIG00000035066) #20	DNASE1L1 (ENSRBIG00000030074) #22	ENSRBIG00000042996 #23	ENSRBIG00000039019 #25	ENSRBIG00000037040 #24
Tarsier	MODERN SPECIES	2152																DNASE1L1 (ENSTSYG00000004076) #22	RPL10 (ENSTSYG00000004067) #23
Strepsirrhini	ANCESTRAL SPECIES	45					ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506
Lemuriformes	ANCESTRAL SPECIES	60					ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506
Mouse lemur	MODERN SPECIES	169	ENSMICG00000043299	ENSMICG00000045052	ENSMICG00000028378	ENSMICG00000041505 ##9	ENSMICG00000031449	IKBKG (ENSMICG00000035937) #10	G6PD (ENSMICG00000016481) #11	FAM3A (ENSMICG00000016470) #12	SLC10A3 (ENSMICG00000016468) #13	UBL4A (ENSMICG00000016459) #14	PLXNA3 (ENSMICG00000016439) #16	FAM50A (ENSMICG00000016428) #17	GDI1 (ENSMICG00000016418) #18	ATP6AP1 (ENSMICG00000016405) #19	TAFAZZIN (ENSMICG00000030766) #20	DNASE1L1 (ENSMICG00000035242) #22	ENSMICG00000033705 #23	EMD (ENSMICG00000004682) #24	FLNA (ENSMICG00000004663) #25	GAB3 (ENSMICG00000000264) #8	ENSMICG00000002818 #7	MPP1 (ENSMICG00000002828)	SMIM9 (ENSMICG00000043321)	ENSMICG00000048060	ENSMICG00000009653	ENSMICG00000037635	F8 (ENSMICG00000029671)	ENSMICG00000007052	ENSMICG00000046481	ENSMICG00000036428	ENSMICG00000047033
Lemuriformes_a	ANCESTRAL SPECIES	110					ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506
Coquerels sifaka	MODERN SPECIES	882					IKBKG (ENSPCOG00000026138) #10	G6PD (ENSPCOG00000028512) #11	FAM3A (ENSPCOG00000016869) #12	SLC10A3 (ENSPCOG00000025772) #13	UBL4A (ENSPCOG00000022735) #14	LAGE3 (ENSPCOG00000027993) #15	PLXNA3 (ENSPCOG00000015843) #16	ENSPCOG00000024061 #17	GDI1 (ENSPCOG00000015358) #18	ATP6AP1 (ENSPCOG00000015508) #19	TAFAZZIN (ENSPCOG00000023186) #20	DNASE1L1 (ENSPCOG00000022635) #22	ENSPCOG00000027122 #23	EMD (ENSPCOG00000015697) #24	FLNA (ENSPCOG00000011059) #25	TKTL1 (ENSPCOG00000023105) #26	ENSPCOG00000015866 #28	MECP2 (ENSPCOG00000024848) #30	IRAK1 (ENSPCOG00000027349) #32	TMEM187 (ENSPCOG00000024026)	HCFC1 (ENSPCOG00000028065) #33	RENBP (ENSPCOG00000013414) #34	ENSPCOG00000027024 #35	ARHGAP4 (ENSPCOG00000009927) #36	AVPR2 (ENSPCOG00000008409) #37	L1CAM (ENSPCOG00000010437)	PDZD4 (ENSPCOG00000025180)
Greater bamboo lemur	MODERN SPECIES	1118														ATP6AP1 (ENSPSMG00000015674) #19	TAFAZZIN (ENSPSMG00000015567) #20	DNASE1L1 (ENSPSMG00000015470) #22	ENSPSMG00000015404 ##23	FLNA (ENSPSMG00000014201) #25	ENSPSMG00000013348 #24
Bushbaby	MODERN SPECIES	364			ENSOGAG00000032447	ENSOGAG00000027129	ENSOGAG00000031211	IKBKG (ENSOGAG00000024983) #10	G6PD (ENSOGAG00000033296) #11	FAM3A (ENSOGAG00000016669) #12	SLC10A3 (ENSOGAG00000002637) #13	UBL4A (ENSOGAG00000030091) #14	PLXNA3 (ENSOGAG00000008330) #16	FAM50A (ENSOGAG00000008322) #17	GDI1 (ENSOGAG00000008317) #18	ATP6AP1 (ENSOGAG00000008310) #19	TAFAZZIN (ENSOGAG00000008304) #20	DNASE1L1 (ENSOGAG00000000100) #22	ENSOGAG00000000099 #23	EMD (ENSOGAG00000029264) #24	FLNA (ENSOGAG00000015265) #25	ENSOGAG00000017264	ENSOGAG00000027452	TKTL1 (ENSOGAG00000000901) #26	TEX28 (ENSOGAG00000000900) #27	ENSOGAG00000000897 #28	MECP2 (ENSOGAG00000015115) #30	IRAK1 (ENSOGAG00000015108) #32	TMEM187 (ENSOGAG00000026922)	HCFC1 (ENSOGAG00000015100) #33	RENBP (ENSOGAG00000032778) #34	NAA10 (ENSOGAG00000013263) #35	ARHGAP4 (ENSOGAG00000015087) #36
Euarchontoglires_A	ANCESTRAL SPECIES	11	ENSGT00390000001700.a.b.b	ENSGT00390000000062.x.b	ENSGT01050000244815.B.a.a	ENSGT00410000025802.g.b ##9	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00910000146917 #31	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37
Glires	ANCESTRAL SPECIES	10	ENSGT00390000001700.a.b.b	ENSGT00390000000062.x.b	ENSGT01050000244815.B.a.a	ENSGT00410000025802.g.b ##9	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00910000146917 #31	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37
Rodentia	ANCESTRAL SPECIES	10	ENSGT00390000001700.a.b.b	ENSGT00390000000062.x.b	ENSGT01050000244815.B.a.a	ENSGT00410000025802.g.b ##9	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00910000146917 #31	ENSGT00940000160502 #32	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506
Rodentia_B	ANCESTRAL SPECIES	16	ENSGT00940000159803 #8	ENSGT01100000263574.b.j	ENSGT01050000244815.B.a.a	ENSGT00410000025802.g.b ##9	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00910000146917 #31	ENSGT00940000160502 #32	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506
Myomorpha	ANCESTRAL SPECIES	6	ENSGT00940000159803 #8	ENSGT01100000263574.b.j	ENSGT01050000244815.B.a.a	ENSGT00410000025802.g.b ##9	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00910000146917 #31	ENSGT00940000160502 #32	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506
Muroidea	ANCESTRAL SPECIES	13	ENSGT00940000159803 #8	ENSGT01100000263574.b.j	ENSGT01050000244815.B.a.a	ENSGT00410000025802.g.b ##9	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00910000146917 #31	ENSGT00940000160502 #32	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506
Muroidea_A	ANCESTRAL SPECIES	7	ENSGT00940000159803 #8	ENSGT01100000263574.b.j	ENSGT01050000244815.B.a.a	ENSGT00410000025802.g.b.q.a ##9	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00910000146917 #31	ENSGT00940000160502 #32	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506
Cricetidae	ANCESTRAL SPECIES	8	ENSGT00940000159803 #8	ENSGT01050000244815.B.a.a	ENSGT01100000263574.b.j	ENSGT00410000025802.g.b.q.a ##9	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00910000146917 #31	ENSGT00940000160502 #32	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506
Cricetinae	ANCESTRAL SPECIES	46	ENSGT00510000047092 #7	ENSGT00940000159803 #8	ENSGT00410000025802.g.b.q.a ##9	ENSGT01050000244815.B.a.a	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00940000161383 #33	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a
Golden Hamster	MODERN SPECIES	857					Ikbkg (ENSMAUG00000008491) #10	ENSMAUG00000008547 #11	Fam3a (ENSMAUG00000009961) #12	Slc10a3 (ENSMAUG00000005496) #13	Ubl4a (ENSMAUG00000019612) #14	Lage3 (ENSMAUG00000021750) #15	Plxna3 (ENSMAUG00000019645) #16	Fam50a (ENSMAUG00000020359) #17	Gdi1 (ENSMAUG00000001476) #18	Atp6ap1 (ENSMAUG00000014514) #19	Tafazzin (ENSMAUG00000001836) #20	Dnase1l1 (ENSMAUG00000005714) #22	ENSMAUG00000013615 #23	Emd (ENSMAUG00000016655) #24	Tex28 (ENSMAUG00000011775) #27	Opn1mw (ENSMAUG00000017549) #28	Mecp2 (ENSMAUG00000018195) #30	Irak1 (ENSMAUG00000002430) #32	Hcfc1 (ENSMAUG00000018495) #33	Naa10 (ENSMAUG00000019021) #35	Arhgap4 (ENSMAUG00000020011) #36	Avpr2 (ENSMAUG00000001098) #37	L1cam (ENSMAUG00000008575)	Pdzd4 (ENSMAUG00000000466)	ENSMAUG00000015090	Idh3g (ENSMAUG00000000657)	Srpk3 (ENSMAUG00000009935)
Chinese hamster chok1gshd	MODERN SPECIES	16	ENSCGRG00001014574 #7	Gab3 (ENSCGRG00001024780) #8	ENSCGRG00001000852 ##9	ENSCGRG00001018213	Or7r1 (ENSCGRG00001002331)	Ikbkg (ENSCGRG00001023852) #10	G6PDH (ENSCGRG00001009805) #11	Fam3a (ENSCGRG00001017590) #12	Ubl4a (ENSCGRG00001024649) #14	Lage3 (ENSCGRG00001006943) #15	Plxna3 (ENSCGRG00001018950) #16	Fam50a (ENSCGRG00001022147) #17	Gdi1 (ENSCGRG00001020747) #18	Atp6ap1 (ENSCGRG00001015351) #19	TAZ (ENSCGRG00001016189) #20	DNASE1L1 (ENSCGRG00001019882) #22	ENSCGRG00001008387 #23	Emd (ENSCGRG00001023962) #24	Flna (ENSCGRG00001013154) #25	ENSCGRG00001010950	Tex28 (ENSCGRG00001014288) #27	Opn1mw (ENSCGRG00001024157) #28	Mecp2 (ENSCGRG00001017650) #30	ENSCGRG00001022957	Irak1 (ENSCGRG00001013928) #32	Hcfc1 (ENSCGRG00001019535) #33	Naa10 (ENSCGRG00001012595) #35	Arhgap4 (ENSCGRG00001023232) #36	Avpr2 (ENSCGRG00001010799) #37	L1cam (ENSCGRG00001020541)	Pdzd4 (ENSCGRG00001012732)
Cricetidae_B	ANCESTRAL SPECIES	28	ENSGT00940000159803 #8	ENSGT01050000244815.B.a.a	ENSGT01100000263574.b.j	ENSGT00410000025802.g.b.q.a ##9	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00910000146917 #31	ENSGT00940000160502 #32	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506
Northern American deer mouse	MODERN SPECIES	475	Or13ae2 (ENSPEMG00000025767)	Or7r1 (ENSPEMG00000009130)	ENSPEMG00000026245 ##9	ENSPEMG00000027888 ##9	ENSPEMG00000029875 ##9	Ikbkg (ENSPEMG00000031110) #10	ENSPEMG00000017532 #11	Fam3a (ENSPEMG00000004757) #12	Ubl4a (ENSPEMG00000027881) #14	Lage3 (ENSPEMG00000011229) #15	Plxna3 (ENSPEMG00000012781) #16	Fam50a (ENSPEMG00000001727) #17	Gdi1 (ENSPEMG00000010952) #18	Atp6ap1 (ENSPEMG00000009724) #19	Tafazzin (ENSPEMG00000007822) #20	Dnase1l1 (ENSPEMG00000013008) #22	ENSPEMG00000015703 ##23	Emd (ENSPEMG00000012081) #24	Flna (ENSPEMG00000009562) #25	Tktl1 (ENSPEMG00000012644) #26	Tex28 (ENSPEMG00000009005) #27	Opn1mw (ENSPEMG00000010994) #28	Mecp2 (ENSPEMG00000015115) #30	ENSPEMG00000025112 #31	Irak1 (ENSPEMG00000001469) #32	Hcfc1 (ENSPEMG00000011837) #33	ENSPEMG00000010870 #34	Arhgap4 (ENSPEMG00000019112) #36	Avpr2 (ENSPEMG00000008325) #37	L1cam (ENSPEMG00000011592)	Pdzd4 (ENSPEMG00000008494)
Prairie vole	MODERN SPECIES	168	ENSMOCG00000001169 #7	Gab3 (ENSMOCG00000015626) #8	Or7r1 (ENSMOCG00000002349)	ENSMOCG00000017711 ##9	Ikbkg (ENSMOCG00000011244) #10	ENSMOCG00000015421 #11	Fam3a (ENSMOCG00000016025) #12	Slc10a3 (ENSMOCG00000008789) #13	Ubl4a (ENSMOCG00000000785) #14	ENSMOCG00000002473 #15	Plxna3 (ENSMOCG00000002375) #16	Fam50a (ENSMOCG00000015890) #17	Gdi1 (ENSMOCG00000006575) #18	Atp6ap1 (ENSMOCG00000001026) #19	Tafazzin (ENSMOCG00000010108) #20	Dnase1l1 (ENSMOCG00000017402) #22	ENSMOCG00000013831 #23	Emd (ENSMOCG00000003977) #24	Flna (ENSMOCG00000007826) #25	Tex28 (ENSMOCG00000011491) #27	ENSMOCG00000017630 #28
Murinae	ANCESTRAL SPECIES	14	ENSGT00390000016992	ENSGT01100000263574.b.j	ENSGT01050000244815.B.a.a	ENSGT00410000025802.g.b.q.a ##9	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.a.b ##23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506	ENSGT00950000183062.a.b
Mus	ANCESTRAL SPECIES	9	ENSGT00940000159803 #8	ENSGT01100000263574.b.j	ENSGT01050000244815.B.a.a	ENSGT00410000025802.g.b.q.a ##9	ENSGT00530000063808.a #10	ENSGT00530000063435.a.o #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.a.b ##23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506	ENSGT00950000183062.a.b
Mus_A	ANCESTRAL SPECIES	15	ENSGT00390000000062.x.b.k.b	ENSGT01100000263574.b.j	ENSGT01050000244815.B.a.a	ENSGT00410000025802.g.b.q.a ##9	ENSGT00530000063808.a #10	ENSGT00530000063435.a.o #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.a.b ##23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506	ENSGT00950000183062.a.b
Mus_B	ANCESTRAL SPECIES	14	ENSGT00390000001700.a.b.b.o.a	ENSGT01100000263574.b.j	ENSGT01050000244815.B.a.a	ENSGT00410000025802.g.b.q.a ##9	ENSGT00530000063808.a #10	ENSGT00530000063435.a.o #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506	ENSGT00950000183062.a.b
Mouse	MODERN SPECIES	37	Pwwp4c (ENSMUSG00000079534)	Or13ae2 (ENSMUSG00000051706)	Or7r1 (ENSMUSG00000043715)	Ctag2l1 (ENSMUSG00000079536) ##9	G6pdx (ENSMUSG00000031400) #11	Ikbkg (ENSMUSG00000004221) #10	Fam3a (ENSMUSG00000031399) #12	Slc10a3 (ENSMUSG00000032806) #13	Ubl4a (ENSMUSG00000015290) #14	Lage3 (ENSMUSG00000015289) #15	Plxna3 (ENSMUSG00000031398) #16	Fam50a (ENSMUSG00000001962) #17	Gdi1 (ENSMUSG00000015291) #18	Atp6ap1 (ENSMUSG00000019087) #19	Tafazzin (ENSMUSG00000009995) #20	Dnase1l1 (ENSMUSG00000019088) #22	Rpl10 (ENSMUSG00000008682) ##23	Emd (ENSMUSG00000001964) #24	Flna (ENSMUSG00000031328) #25	Tktl1 (ENSMUSG00000031397) #26	Tex28 (ENSMUSG00000062564) #27	Opn1mw (ENSMUSG00000031394) #28	Mecp2 (ENSMUSG00000031393) #30	Irak1 (ENSMUSG00000031392) #32	Hcfc1 (ENSMUSG00000031386) #33	Renbp (ENSMUSG00000031387) #34	Naa10 (ENSMUSG00000031388) #35	Avpr2 (ENSMUSG00000031390) #37	Arhgap4 (ENSMUSG00000031389) #36	L1cam (ENSMUSG00000031391)	Pdzd4 (ENSMUSG00000002006)
Mus_C	ANCESTRAL SPECIES	27	ENSGT00510000047092 #7	ENSGT01100000263574.b.j	ENSGT01050000244815.B.a.a	ENSGT00410000025802.g.b.q.a ##9	ENSGT00530000063808.a #10	ENSGT00530000063435.a.o #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506	ENSGT00950000183062.a.b
spretus	MODERN SPECIES	19	MGP_SPRETEiJ_G0034347	Or13ae2 (MGP_SPRETEiJ_G0034346)	Or7r1 (MGP_SPRETEiJ_G0034345)	MGP_SPRETEiJ_G0034344 ##9	G6pdx (MGP_SPRETEiJ_G0034343) #11	Ikbkg (MGP_SPRETEiJ_G0034342) #10	Fam3a (MGP_SPRETEiJ_G0034341) #12	Slc10a3 (MGP_SPRETEiJ_G0034340) #13	Ubl4a (MGP_SPRETEiJ_G0034339) #14	Lage3 (MGP_SPRETEiJ_G0034338) #15	Plxna3 (MGP_SPRETEiJ_G0034337) #16	Fam50a (MGP_SPRETEiJ_G0034336) #17	Gdi1 (MGP_SPRETEiJ_G0034335) #18	Atp6ap1 (MGP_SPRETEiJ_G0034334) #19	Tafazzin (MGP_SPRETEiJ_G0034333) #20	Dnase1l1 (MGP_SPRETEiJ_G0034332) #22	MGP_SPRETEiJ_G0034331 #23	Emd (MGP_SPRETEiJ_G0034330) #24	Flna (MGP_SPRETEiJ_G0034329) #25	Tktl1 (MGP_SPRETEiJ_G0034328) #26	Tex28 (MGP_SPRETEiJ_G0034327) #27	Opn1mw (MGP_SPRETEiJ_G0034326) #28	Mecp2 (MGP_SPRETEiJ_G0034325) #30	Irak1 (MGP_SPRETEiJ_G0034324) #32	Hcfc1 (MGP_SPRETEiJ_G0034323) #33	Renbp (MGP_SPRETEiJ_G0034322) #34	Naa10 (MGP_SPRETEiJ_G0034321) #35	Avpr2 (MGP_SPRETEiJ_G0034320) #37	Arhgap4 (MGP_SPRETEiJ_G0034319) #36	L1cam (MGP_SPRETEiJ_G0034318)	Pdzd4 (MGP_SPRETEiJ_G0034317)
Ryukyu mouse	MODERN SPECIES	19	Mpp1 (MGP_CAROLIEiJ_G0033192)	Dkc1 (MGP_CAROLIEiJ_G0033191) #7	Or13ae2 (MGP_CAROLIEiJ_G0033190)	Or7r1 (MGP_CAROLIEiJ_G0033189)	G6pdx (MGP_CAROLIEiJ_G0033188) #11	Ikbkg (MGP_CAROLIEiJ_G0033187) #10	Fam3a (MGP_CAROLIEiJ_G0033186) #12	Slc10a3 (MGP_CAROLIEiJ_G0033185) #13	Ubl4a (MGP_CAROLIEiJ_G0033184) #14	Lage3 (MGP_CAROLIEiJ_G0033183) #15	Plxna3 (MGP_CAROLIEiJ_G0033182) #16	Fam50a (MGP_CAROLIEiJ_G0033181) #17	Gdi1 (MGP_CAROLIEiJ_G0033180) #18	Atp6ap1 (MGP_CAROLIEiJ_G0033179) #19	Tafazzin (MGP_CAROLIEiJ_G0033178) #20	Dnase1l1 (MGP_CAROLIEiJ_G0033177) #22	MGP_CAROLIEiJ_G0033176 ##23	Emd (MGP_CAROLIEiJ_G0033175) #24	Flna (MGP_CAROLIEiJ_G0033174) #25	Tktl1 (MGP_CAROLIEiJ_G0033173) #26	Tex28 (MGP_CAROLIEiJ_G0033172) #27	Opn1mw (MGP_CAROLIEiJ_G0033171) #28	Mecp2 (MGP_CAROLIEiJ_G0033170) #30	Irak1 (MGP_CAROLIEiJ_G0033169) #32	Hcfc1 (MGP_CAROLIEiJ_G0033168) #33	Renbp (MGP_CAROLIEiJ_G0033167) #34	Naa10 (MGP_CAROLIEiJ_G0033166) #35	Avpr2 (MGP_CAROLIEiJ_G0033165) #37	Arhgap4 (MGP_CAROLIEiJ_G0033164) #36	L1cam (MGP_CAROLIEiJ_G0033163)	Pdzd4 (MGP_CAROLIEiJ_G0033162)
Shrew mouse	MODERN SPECIES	23	Dkc1 (MGP_PahariEiJ_G0031735) #7	Gab3 (MGP_PahariEiJ_G0031734) #8	Or13ae2 (MGP_PahariEiJ_G0031733)	Or7r1 (MGP_PahariEiJ_G0031732)	G6pdx (MGP_PahariEiJ_G0031731) #11	Ikbkg (MGP_PahariEiJ_G0031730) #10	Fam3a (MGP_PahariEiJ_G0031729) #12	Slc10a3 (MGP_PahariEiJ_G0031728) #13	Ubl4a (MGP_PahariEiJ_G0031727) #14	Lage3 (MGP_PahariEiJ_G0031726) #15	Plxna3 (MGP_PahariEiJ_G0031725) #16	Fam50a (MGP_PahariEiJ_G0031724) #17	Gdi1 (MGP_PahariEiJ_G0031723) #18	Atp6ap1 (MGP_PahariEiJ_G0031722) #19	Tafazzin (MGP_PahariEiJ_G0031721) #20	Dnase1l1 (MGP_PahariEiJ_G0031720) #22	MGP_PahariEiJ_G0031719 ##23	Emd (MGP_PahariEiJ_G0031718) #24	Flna (MGP_PahariEiJ_G0031717) #25	MGP_PahariEiJ_G0031716 #26	Tex28 (MGP_PahariEiJ_G0031715) #27	Opn1mw (MGP_PahariEiJ_G0031714) #28	Mecp2 (MGP_PahariEiJ_G0031713) #30	Irak1 (MGP_PahariEiJ_G0031712) #32	Hcfc1 (MGP_PahariEiJ_G0031711) #33	Renbp (MGP_PahariEiJ_G0031710) #34	Naa10 (MGP_PahariEiJ_G0031709) #35	Avpr2 (MGP_PahariEiJ_G0031708) #37	Arhgap4 (MGP_PahariEiJ_G0031707) #36	L1cam (MGP_PahariEiJ_G0031706)	Pdzd4 (MGP_PahariEiJ_G0031705)
Rat	MODERN SPECIES	46	LOC120099253 (ENSRNOG00000061511) ##9	Or7r1 (ENSRNOG00000058820)	LOC690348 (ENSRNOG00000060839) ##9	Ikbkg (ENSRNOG00000060936) #10	G6pd (ENSRNOG00000056728) #11	Fam3a (ENSRNOG00000060623) #12	Ubl4a (ENSRNOG00000053061) #14	Slc10a3 (ENSRNOG00000060580) #13	Lage3 (ENSRNOG00000053456)	Plxna3 (ENSRNOG00000060464) #16	Fam50a (ENSRNOG00000058439) #17	Gdi1 (ENSRNOG00000056870) #18	Atp6ap1 (ENSRNOG00000054352) #19	Tafazzin (ENSRNOG00000053023) #20	ENSRNOG00000063225	Dnase1l1 (ENSRNOG00000055641) #22	Rpl10 (ENSRNOG00000056765) #23	Emd (ENSRNOG00000058882) #24	Flna (ENSRNOG00000054890) #25	Tktl1 (ENSRNOG00000055557) #26	Tex28 (ENSRNOG00000051438) #27	Opn1mw (ENSRNOG00000051529) #28	Mecp2 (ENSRNOG00000056659) #30	Irak1 (ENSRNOG00000060869) #32	Hcfc1 (ENSRNOG00000051948) #33	Renbp (ENSRNOG00000054765) #34	Naa10 (ENSRNOG00000060063) #35	Avpr2 (ENSRNOG00000059862) #37	Arhgap4 (ENSRNOG00000058545) #36	L1cam (ENSRNOG00000061230)	Pdzd4 (ENSRNOG00000056174)
Upper Galilee mountains blind mole rat	MODERN SPECIES	660		Or13ae2 (ENSNGAG00000001537)	ENSNGAG00000024034 ##9	Ikbkg (ENSNGAG00000019535) #10	ENSNGAG00000020668 #11	Fam3a (ENSNGAG00000016683) #12	Slc10a3 (ENSNGAG00000007975) #13	Ubl4a (ENSNGAG00000023782) #14	Lage3 (ENSNGAG00000023293) #15	Plxna3 (ENSNGAG00000022548) #16	ENSNGAG00000012608	Fam50a (ENSNGAG00000021495) #17	Gdi1 (ENSNGAG00000023333) #18	Atp6ap1 (ENSNGAG00000021512) #19	Tafazzin (ENSNGAG00000008680) #20	Dnase1l1 (ENSNGAG00000024155) #22	ENSNGAG00000023746 #23	Emd (ENSNGAG00000018770) #24	Flna (ENSNGAG00000013524) #25	Tex28 (ENSNGAG00000023701) #27	Opn1mw (ENSNGAG00000011604) #28	Mecp2 (ENSNGAG00000009171) #30	Irak1 (ENSNGAG00000011647) #32	Hcfc1 (ENSNGAG00000013083) #33	Renbp (ENSNGAG00000021686) #34	Naa10 (ENSNGAG00000020303) #35	Arhgap4 (ENSNGAG00000015413) #36	Avpr2 (ENSNGAG00000009849) #37	L1cam (ENSNGAG00000013550)	Pdzd4 (ENSNGAG00000009443)	ENSNGAG00000015787
Rodentia_A	ANCESTRAL SPECIES	9	ENSGT00510000047092 #7	ENSGT00940000159803 #8	ENSGT00410000025802.g.b ##9	ENSGT01050000244815.B.a.a	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506	ENSGT00950000183062.a.b
Sciuridae	ANCESTRAL SPECIES	27				ENSGT01050000244815.B.a.a	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506	ENSGT00950000183062.a.b
Marmotini	ANCESTRAL SPECIES	83					ENSGT01050000244815.B.a.a	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A.e #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506	ENSGT00950000183062.a.b
Marmotini_b	ANCESTRAL SPECIES	124					ENSGT01050000244815.B.a.a	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A.e #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506	ENSGT00950000183062.a.b
Arctic ground squirrel	MODERN SPECIES	823	ENSUPAG00010010746 ##9	ENSUPAG00010010780 #9	ENSUPAG00010010787	ENSUPAG00010010804	ENSUPAG00010010808	IKBKG (ENSUPAG00010010819) #10	FAM3A (ENSUPAG00010010917) #12	SLC10A3 (ENSUPAG00010010974) #13	ENSUPAG00010010991 #15	ENSUPAG00010010993	PLXNA3 (ENSUPAG00010011001) #16	ENSUPAG00010011078 #17	GDI1 (ENSUPAG00010011085) #18	ATP6AP1 (ENSUPAG00010011086) #19	TAFAZZIN (ENSUPAG00010000055) #20	DNASE1L1 (ENSUPAG00010000232) #22	ENSUPAG00010000252 ##23	EMD (ENSUPAG00010000276) #24	FLNA (ENSUPAG00010000336) #25
Squirrel	MODERN SPECIES	409					ENSSTOG00000027400	G6PD (ENSSTOG00000021077) #11	IKBKG (ENSSTOG00000011082) #10	FAM3A (ENSSTOG00000022234) #12	SLC10A3 (ENSSTOG00000026515) #13	UBL4A (ENSSTOG00000022150) #14	PLXNA3 (ENSSTOG00000003432) #16	ENSSTOG00000004448 #17	GDI1 (ENSSTOG00000004429) #18	ATP6AP1 (ENSSTOG00000004401) #19	TAFAZZIN (ENSSTOG00000011873) #20	DNASE1L1 (ENSSTOG00000011867) #22	ENSSTOG00000011857 #23	EMD (ENSSTOG00000014689) #24	FLNA (ENSSTOG00000005036) #25	TKTL1 (ENSSTOG00000005014) #26	TEX28 (ENSSTOG00000022078) #27	ENSSTOG00000024701 #28	MECP2 (ENSSTOG00000006094) #30	IRAK1 (ENSSTOG00000007991) #32	HCFC1 (ENSSTOG00000029220) #33	RENBP (ENSSTOG00000010247) #34	NAA10 (ENSSTOG00000010237) #35	ARHGAP4 (ENSSTOG00000022503) #36	AVPR2 (ENSSTOG00000008352) #37	L1CAM (ENSSTOG00000008316)	PDZD4 (ENSSTOG00000021423)
Alpin marmot	MODERN SPECIES	136						ENSMMMG00000014778	IKBKG (ENSMMMG00000014671) #10	G6PD (ENSMMMG00000014645) #11	FAM3A (ENSMMMG00000014550) #12	SLC10A3 (ENSMMMG00000014545) #13	UBL4A (ENSMMMG00000014537) #14	PLXNA3 (ENSMMMG00000014513) #16	FAM50A (ENSMMMG00000014490) #17	GDI1 (ENSMMMG00000014475) #18	TAFAZZIN (ENSMMMG00000014302) #20	DNASE1L1 (ENSMMMG00000014299) #22	ENSMMMG00000014279 #23	EMD (ENSMMMG00000014270) #24	FLNA (ENSMMMG00000010080) #25	TKTL1 (ENSMMMG00000010036) #26	TEX28 (ENSMMMG00000010023) #27	ENSMMMG00000010010 #28	MECP2 (ENSMMMG00000009970) #30	IRAK1 (ENSMMMG00000009239) #32	HCFC1 (ENSMMMG00000009171) #33	RENBP (ENSMMMG00000009149) #34	ENSMMMG00000009143 #35	ARHGAP4 (ENSMMMG00000008497) #36	AVPR2 (ENSMMMG00000008488) #37	L1CAM (ENSMMMG00000008292)	PDZD4 (ENSMMMG00000008247)
Eurasian red squirrel	MODERN SPECIES	156	ENSSVLG00005017050 #9	ENSSVLG00005017122	ENSSVLG00005017166	ENSSVLG00005017218	IKBKG (ENSSVLG00005017293) #10	G6PD (ENSSVLG00005017520) #11	FAM3A (ENSSVLG00005017584) #12	SLC10A3 (ENSSVLG00005017774) #13	UBL4A (ENSSVLG00005017819) #14	LAGE3 (ENSSVLG00005017858) #15	PLXNA3 (ENSSVLG00005017881) #16	FAM50A (ENSSVLG00005017921) #17	GDI1 (ENSSVLG00005017962) #18	ATP6AP1 (ENSSVLG00005018016) #19	TAFAZZIN (ENSSVLG00005018196) #20	DNASE1L1 (ENSSVLG00005018343) #22	ENSSVLG00005018375 #23	FLNA (ENSSVLG00005018546) #25	EMD (ENSSVLG00005019520) #24	TKTL1 (ENSSVLG00005017318) #26	TEX28 (ENSSVLG00005017596) #27	ENSSVLG00005017738	ENSSVLG00005017793 #28	MECP2 (ENSSVLG00005017899) #30	ENSSVLG00005018093 #32	HCFC1 (ENSSVLG00005018524) #33	RENBP (ENSSVLG00005019023) #34	NAA10 (ENSSVLG00005019123) #35	ARHGAP4 (ENSSVLG00005019458) #36	ENSSVLG00005019536	AVPR2 (ENSSVLG00005019578) #37
Hystricomorpha	ANCESTRAL SPECIES	54	ENSGT00940000158744	ENSGT00510000047092 #7	ENSGT00940000159803 #8	ENSGT01050000244815.B.a.a	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.B.a.a ##17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506	ENSGT00950000183062.a.b
Hystricomorpha_a	ANCESTRAL SPECIES	61	ENSGT00940000158744	ENSGT00510000047092 #7	ENSGT00940000159803 #8	ENSGT01050000244815.B.a.a	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.B.a.a ##17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506	ENSGT00950000183062.a.b
Guinea pig	MODERN SPECIES	148	MPP1 (ENSCPOG00000008826)	DKC1 (ENSCPOG00000008825) #7	GAB3 (ENSCPOG00000002987) #8	ENSCPOG00000026136	IKBKG (ENSCPOG00000021550) #10	G6PD (ENSCPOG00000021395) #11	FAM3A (ENSCPOG00000019367) #12	SLC10A3 (ENSCPOG00000007289) #13	UBL4A (ENSCPOG00000040690) #14	ENSCPOG00000034445 #15	PLXNA3 (ENSCPOG00000011493) #16	ENSCPOG00000005974 ##17	GDI1 (ENSCPOG00000032738) #18	ATP6AP1 (ENSCPOG00000005972) #19	TAFAZZIN (ENSCPOG00000020454) #20	DNASE1L1 (ENSCPOG00000005648) #22	ENSCPOG00000002355 #23	EMD (ENSCPOG00000002642) #24	FLNA (ENSCPOG00000002672) #25	TKTL1 (ENSCPOG00000011767) #26	ENSCPOG00000021789 #27	ENSCPOG00000011198 #28	MECP2 (ENSCPOG00000012579) #30	IRAK1 (ENSCPOG00000039151) #32	ENSCPOG00000024784 #34	NAA10 (ENSCPOG00000011495) #35	ENSCPOG00000026143 #36	AVPR2 (ENSCPOG00000012697) #37	L1CAM (ENSCPOG00000005519)	PDZD4 (ENSCPOG00000019482)	SSR4 (ENSCPOG00000006898)
Hystricomorpha_b	ANCESTRAL SPECIES	84					ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.B.a.a ##17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992
Long-tailed chinchilla	MODERN SPECIES	287			ENSCLAG00000017603	ENSCLAG00000017457	IKBKG (ENSCLAG00000003721) #10	G6PD (ENSCLAG00000003284) #11	FAM3A (ENSCLAG00000002528) #12	SLC10A3 (ENSCLAG00000002307) #13	UBL4A (ENSCLAG00000002161) #14	LAGE3 (ENSCLAG00000002127) #15	PLXNA3 (ENSCLAG00000001910) #16	ENSCLAG00000002733 ##17	GDI1 (ENSCLAG00000002425) #18	ATP6AP1 (ENSCLAG00000002132) #19	TAFAZZIN (ENSCLAG00000010970) #20	DNASE1L1 (ENSCLAG00000003494) #22	ENSCLAG00000003108 ##23	FLNA (ENSCLAG00000003106) #25	EMD (ENSCLAG00000002874) #24	TKTL1 (ENSCLAG00000001825) #26	ENSCLAG00000001715 #28	MECP2 (ENSCLAG00000001648) #30	IRAK1 (ENSCLAG00000006192) #32	HCFC1 (ENSCLAG00000004175) #33	RENBP (ENSCLAG00000003810) #34	NAA10 (ENSCLAG00000001427) #35	ENSCLAG00000001334 #36	AVPR2 (ENSCLAG00000002650) #37	L1CAM (ENSCLAG00000001453)	PDZD4 (ENSCLAG00000002707)	SSR4 (ENSCLAG00000002670)
Degu	MODERN SPECIES	259						IKBKG (ENSODEG00000005911) #10	ENSODEG00000006077 #11	FAM3A (ENSODEG00000006189) #12	UBL4A (ENSODEG00000006287) #14	ENSODEG00000006315 #15	PLXNA3 (ENSODEG00000006368) #16	ENSODEG00000006510 ##17	GDI1 (ENSODEG00000006550) #18	ATP6AP1 (ENSODEG00000003643) #19	TAFAZZIN (ENSODEG00000003758) #20	DNASE1L1 (ENSODEG00000003830) #22	ENSODEG00000003868 #23	EMD (ENSODEG00000003890) #24	FLNA (ENSODEG00000004055) #25	TKTL1 (ENSODEG00000004431) #26	ENSODEG00000004454	ENSODEG00000004473 #28	ENSODEG00000004516	MECP2 (ENSODEG00000004523) #30	IRAK1 (ENSODEG00000004583) #32	HCFC1 (ENSODEG00000004823) #33	RENBP (ENSODEG00000005065) #34	ENSODEG00000005100 #35	ARHGAP4 (ENSODEG00000005124) #36	AVPR2 (ENSODEG00000005166) #37	ENSODEG00000005204
Naked mole-rat female	MODERN SPECIES	31						ENSHGLG00000032904 #10	G6PD (ENSHGLG00000001124) #11	FAM3A (ENSHGLG00000005912) #12	ENSHGLG00000003702 #14	LAGE3 (ENSHGLG00000039993) #15	PLXNA3 (ENSHGLG00000002186) #16	ENSHGLG00000039319 ##17	GDI1 (ENSHGLG00000003275) #18	ATP6AP1 (ENSHGLG00000002607) #19	ENSHGLG00000009984 #20	DNASE1L1 (ENSHGLG00000013868) #22	RPL10 (ENSHGLG00000002349) ##23	TKTL1 (ENSHGLG00000042978) #26	ENSHGLG00000043472 #27	MECP2 (ENSHGLG00000000899) #30	IRAK1 (ENSHGLG00000002116) #32	HCFC1 (ENSHGLG00000001143) #33	RENBP (ENSHGLG00000009835) #34	NAA10 (ENSHGLG00000002773) #35	ARHGAP4 (ENSHGLG00000000857) #36	AVPR2 (ENSHGLG00000006784) #37	L1CAM (ENSHGLG00000003403)	PDZD4 (ENSHGLG00000001939)	SSR4 (ENSHGLG00000001720)	IDH3G (ENSHGLG00000000443)	PLXNB3 (ENSHGLG00000002203)
Lagomorpha	ANCESTRAL SPECIES	714																ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.t ##23
Rabbit	MODERN SPECIES	185																DNASE1L1 (ENSOCUG00000015910) #22	ENSOCUG00000015919 ##23
Pika	MODERN SPECIES	10069																DNASE1L1 (ENSOPRG00000007379) #22
Laurasiatheria	ANCESTRAL SPECIES	26	ENSGT00940000158744	ENSGT00510000047092 #7	ENSGT00940000159803 #8	ENSGT00410000025802.h #9	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.a.b ##23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00910000146917 #31	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37
Laurasiatheria_a	ANCESTRAL SPECIES	10	ENSGT00940000158744	ENSGT00510000047092 #7	ENSGT00940000159803 #8	ENSGT00410000025802.h #9	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.a.b ##23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00910000146917 #31	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37
Artiodactyla	ANCESTRAL SPECIES	9	ENSGT00410000025802.h #9	ENSGT01030000235238	ENSGT00410000025802.g.b ##9	ENSGT01050000244815.B.a.a	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.a.b ##23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00910000146917 #31	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37
Suina	ANCESTRAL SPECIES	7	ENSGT00510000047092 #7	ENSGT00940000159803 #8	ENSGT00410000025802.g.b ##9	ENSGT01050000244815.B.a.a	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a.f #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.a.b ##23	ENSGT00940000153588.b #25	ENSGT00390000002034 #24	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00910000146917 #31	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37
Pig	MODERN SPECIES	300	DKC1 (ENSSSCG00000012823) #7	GAB3 (ENSSSCG00000012824) #8	ENSSSCG00000049540 ##9	ENSSSCG00000012827	IKBKG (ENSSSCG00000012825) #10	G6PD (ENSSSCG00000025108) #11	FAM3A (ENSSSCG00000028934) #12	SLC10A3 (ENSSSCG00000025766) #13	ENSSSCG00000057536 #14	ENSSSCG00000032959 #15	PLXNA3 (ENSSSCG00000023483) #16	FAM50A (ENSSSCG00000025303) #17	GDI1 (ENSSSCG00000030421) #18	ATP6AP1 (ENSSSCG00000037310) #19	TAFAZZIN (ENSSSCG00000039655) #20	DNASE1L1 (ENSSSCG00000037032) #22	RPL10 (ENSSSCG00000035997) ##23	FLNA (ENSSSCG00000033299) #25	EMD (ENSSSCG00000037777) #24	TKTL1 (ENSSSCG00000029443) #26	TEX28 (ENSSSCG00000029513) #27	ENSSSCG00000029523 #28	MECP2 (ENSSSCG00000034742) #30	ENSSSCG00000059337 #31	IRAK1 (ENSSSCG00000012795) #32	ENSSSCG00000050581	HCFC1 (ENSSSCG00000012793) #33	RENBP (ENSSSCG00000012792) #34	NAA10 (ENSSSCG00000012791) #35	ARHGAP4 (ENSSSCG00000012790) #36	AVPR2 (ENSSSCG00000012789) #37
Chacoan peccary	MODERN SPECIES	44	ENSCWAG00000000236 ##9	ENSCWAG00000000223	ENSCWAG00000000203	IKBKG (ENSCWAG00000000145) #10	G6PD (ENSCWAG00000000077) #11	FAM3A (ENSCWAG00000000031) #12	SLC10A3 (ENSCWAG00000000012) #13	UBL4A (ENSCWAG00000000008) #14	ENSCWAG00000021354	ENSCWAG00000021347 #15	PLXNA3 (ENSCWAG00000021299) #16	FAM50A (ENSCWAG00000021283) #17	GDI1 (ENSCWAG00000021263) #18	ATP6AP1 (ENSCWAG00000021247) #19	TAFAZZIN (ENSCWAG00000021221) #20	DNASE1L1 (ENSCWAG00000021201) #22	ENSCWAG00000021182 ##23
Artiodactyla_a	ANCESTRAL SPECIES	9	ENSGT00410000025802.h #9	ENSGT01030000235238	ENSGT00410000025802.g.b ##9	ENSGT00960000186859	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.a.b ##23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00910000146917 #31	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37
Artiodactyla_b	ANCESTRAL SPECIES	19	ENSGT00940000159803 #8	ENSGT01030000235238	ENSGT00410000025802.g.b ##9	ENSGT00960000186859	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.a.b ##23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00910000146500
Cetacea	ANCESTRAL SPECIES	19	ENSGT00940000158744	ENSGT00510000047092 #7	ENSGT00940000159803 #8	ENSGT00410000025802.g.b ##9	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A.n #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.a.b ##23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00910000146500
Odontoceti	ANCESTRAL SPECIES	19	ENSGT00940000158744	ENSGT00510000047092 #7	ENSGT00940000159803 #8	ENSGT00410000025802.g.b ##9	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A.m #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.a.b ##23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00910000146500
Odontoceti_a	ANCESTRAL SPECIES	21	ENSGT00940000158744	ENSGT00510000047092 #7	ENSGT00940000159803 #8	ENSGT00960000186859	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A.m #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.a.b ##23	ENSGT00390000002034.i #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00910000146500
Odontoceti_b	ANCESTRAL SPECIES	17	ENSGT00940000158744	ENSGT00510000047092 #7	ENSGT00940000159803 #8	ENSGT00960000186859	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A.m #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.a.b ##23	ENSGT00390000002034.i #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506
Monodontidae	ANCESTRAL SPECIES	19	ENSGT00940000158744	ENSGT00510000047092 #7	ENSGT00940000159803 #8	ENSGT00960000186859	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A.m #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.a.b ##23	ENSGT00390000002034.i #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992
Narwhal	MODERN SPECIES	309				IKBKG (ENSMMNG00015013582) #10	G6PD (ENSMMNG00015013556) #11	FAM3A (ENSMMNG00015013509) #12	SLC10A3 (ENSMMNG00015013481) #13	UBL4A (ENSMMNG00015013467) #14	LAGE3 (ENSMMNG00015013456) #15	PLXNA3 (ENSMMNG00015013425) #16	ENSMMNG00015013390 #17	GDI1 (ENSMMNG00015013359) #18	ATP6AP1 (ENSMMNG00015013337) #19	ENSMMNG00015013329	ENSMMNG00015013313 #20	DNASE1L1 (ENSMMNG00015013295) #22	ENSMMNG00015013277 ##23	ENSMMNG00015013213 #24	FLNA (ENSMMNG00015013139) #25	TKTL1 (ENSMMNG00015013076) #26	ENSMMNG00015013056	ENSMMNG00015013048	ENSMMNG00015013034 #28	MECP2 (ENSMMNG00015012982) #30	IRAK1 (ENSMMNG00015012947) #32	TMEM187 (ENSMMNG00015012935)	HCFC1 (ENSMMNG00015012895) #33	RENBP (ENSMMNG00015012853) #34	ARHGAP4 (ENSMMNG00015012794) #36	AVPR2 (ENSMMNG00015012757) #37	L1CAM (ENSMMNG00015012599)
Beluga whale	MODERN SPECIES	139	MPP1 (ENSDLEG00000011647)	DKC1 (ENSDLEG00000011603) #7	GAB3 (ENSDLEG00000011559) #8	ENSDLEG00000011545	ENSDLEG00000011523	IKBKG (ENSDLEG00000011500) #10	G6PD (ENSDLEG00000011468) #11	FAM3A (ENSDLEG00000011447) #12	UBL4A (ENSDLEG00000011413) #13	LAGE3 (ENSDLEG00000011398) #15	PLXNA3 (ENSDLEG00000011331) #16	FAM50A (ENSDLEG00000011270) #17	GDI1 (ENSDLEG00000011245) #18	ATP6AP1 (ENSDLEG00000011212) #19	TAZ (ENSDLEG00000011183) #20	DNASE1L1 (ENSDLEG00000011154) #22	ENSDLEG00000011125 ##23	EMD (ENSDLEG00000011102) #24	FLNA (ENSDLEG00000010999) #25	TKTL1 (ENSDLEG00000010974) #26	ENSDLEG00000010916 #28	MECP2 (ENSDLEG00000010908) #30	IRAK1 (ENSDLEG00000010892) #32	TMEM187 (ENSDLEG00000010884)	HCFC1 (ENSDLEG00000010826) #33	RENBP (ENSDLEG00000010782) #34	ARHGAP4 (ENSDLEG00000010745) #36	AVPR2 (ENSDLEG00000010715) #37	L1CAM (ENSDLEG00000010633)	PDZD4 (ENSDLEG00000010618)	SSR4 (ENSDLEG00000010578)
Vaquita	MODERN SPECIES	34	DKC1 (ENSPSNG00000022426) #7	GAB3 (ENSPSNG00000022421) #8	ENSPSNG00000022416 #15	ENSPSNG00000022414	ENSPSNG00000022407	IKBKG (ENSPSNG00000022395) #10	G6PD (ENSPSNG00000022382) #11	FAM3A (ENSPSNG00000022374) #12	SLC10A3 (ENSPSNG00000022364) #13	ENSPSNG00000022354 #15	PLXNA3 (ENSPSNG00000022341) #16	ENSPSNG00000022331 #17	GDI1 (ENSPSNG00000022323) #18	ATP6AP1 (ENSPSNG00000022314) #19	TAFAZZIN (ENSPSNG00000022306) #20	DNASE1L1 (ENSPSNG00000022297) #22	ENSPSNG00000022280 ##23	ENSPSNG00000022266 #24	FLNA (ENSPSNG00000022089) #25	TKTL1 (ENSPSNG00000021994) #26	ENSPSNG00000021965	ENSPSNG00000021951	ENSPSNG00000021942	ENSPSNG00000021927	TEX28 (ENSPSNG00000021914) #27	ENSPSNG00000021893 #28	MECP2 (ENSPSNG00000021858) #30	IRAK1 (ENSPSNG00000021819) #32	TMEM187 (ENSPSNG00000021804)	HCFC1 (ENSPSNG00000021713) #33	ENSPSNG00000021660 #34
Dolphin	MODERN SPECIES	6810											PLXNA3 (ENSTTRG00000011474) #16	FAM50A (ENSTTRG00000011462) #17	GDI1 (ENSTTRG00000011454) #18	ATP6AP1 (ENSTTRG00000011434) #19	TAFAZZIN (ENSTTRG00000011410) #20	DNASE1L1 (ENSTTRG00000011408) #22	ENSTTRG00000011407 ##23
Sperm whale	MODERN SPECIES	13	ENSPCTG00005015667	F8 (ENSPCTG00005015296)	SMIM9 (ENSPCTG00005015221)	MPP1 (ENSPCTG00005014958)	DKC1 (ENSPCTG00005014862) #7	GAB3 (ENSPCTG00005014727) #8	ENSPCTG00005014674 ##9	IKBKG (ENSPCTG00005014430) #10	GDI1 (ENSPCTG00005014385) #18	FAM50A (ENSPCTG00005014324) #17	PLXNA3 (ENSPCTG00005014209) #16	ENSPCTG00005014136 #15	UBL4A (ENSPCTG00005014090) #14	SLC10A3 (ENSPCTG00005014048) #13	FAM3A (ENSPCTG00005013803) #11	DNASE1L1 (ENSPCTG00005013759) #22	RPL10 (ENSPCTG00005013674) ##23	EMD (ENSPCTG00005013517) #24	FLNA (ENSPCTG00005012993) #25	TKTL1 (ENSPCTG00005012476) #26	ENSPCTG00005022081	TEX28 (ENSPCTG00005022073) #27	ENSPCTG00005022067 #28	MECP2 (ENSPCTG00005022045) #30	ENSPCTG00005022009 #32	HCFC1 (ENSPCTG00005021915) #33	RENBP (ENSPCTG00005021884) #34	NAA10 (ENSPCTG00005021859) #35	ARHGAP4 (ENSPCTG00005021658) #36	AVPR2 (ENSPCTG00005021602) #37	L1CAM (ENSPCTG00005021438)
Blue whale	MODERN SPECIES	40	DKC1 (ENSBMSG00010021430) #7	ENSBMSG00010021407 #8	ENSBMSG00010021382	ENSBMSG00010021370	IKBKG (ENSBMSG00010021344) #10	G6PD (ENSBMSG00010021326) #11	FAM3A (ENSBMSG00010021308) #12	SLC10A3 (ENSBMSG00010021301) #13	UBL4A (ENSBMSG00010021291) #14	LAGE3 (ENSBMSG00010021278) #15	PLXNA3 (ENSBMSG00010021267) #16	ENSBMSG00010021250 #17	GDI1 (ENSBMSG00010021239) #18	ATP6AP1 (ENSBMSG00010021220) #19	TAFAZZIN (ENSBMSG00010021182) #20	DNASE1L1 (ENSBMSG00010021173) #22	ENSBMSG00010021148 ##23	ENSBMSG00010021119 #26	ENSBMSG00010021096 #26	EMD (ENSBMSG00010021072) #24	FLNA (ENSBMSG00010020850) #25	ENSBMSG00010020592 #26	TEX28 (ENSBMSG00010020541) #27	ENSBMSG00010020090 #28	MECP2 (ENSBMSG00010019964) #30	IRAK1 (ENSBMSG00010019854) #32	TMEM187 (ENSBMSG00010019836)	HCFC1 (ENSBMSG00010019528) #33	RENBP (ENSBMSG00010019364) #34	NAA10 (ENSBMSG00010019439) #35	ARHGAP4 (ENSBMSG00010018853) #36
Pecora	ANCESTRAL SPECIES	38					ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.a.b.a.a ##23	ENSGT00390000003897.s.b.a.a.b.b ##23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37
Yarkand deer	MODERN SPECIES	1323	HCFC1 (ENSCHYG00000025112) #33	IRAK1 (ENSCHYG00000024907) #32	MECP2 (ENSCHYG00000024843) #30	ENSCHYG00000024807 #28	TEX28 (ENSCHYG00000024783) #27	TKTL1 (ENSCHYG00000024748) #26	EMD (ENSCHYG00000024666) #24	IKBKG (ENSCHYG00000024518) #10	G6PD (ENSCHYG00000024413) #11	ENSCHYG00000024202 #12	LAGE3 (ENSCHYG00000024139) #15	PLXNA3 (ENSCHYG00000023890) #16	GDI1 (ENSCHYG00000023645) #18	ATP6AP1 (ENSCHYG00000023535) #19	TAFAZZIN (ENSCHYG00000022770) #20	DNASE1L1 (ENSCHYG00000022608) #22	ENSCHYG00000022474 ##23	FLNA (ENSCHYG00000021422) #25	ENSCHYG00000021292	ENSCHYG00000021269	ENSCHYG00000021240 ##9	ENSCHYG00000021194	ENSCHYG00000021132 ##9	GAB3 (ENSCHYG00000020865) #8	DKC1 (ENSCHYG00000020555) #7	MPP1 (ENSCHYG00000020123)	ENSCHYG00000020059	F8 (ENSCHYG00000019104)	FUNDC2 (ENSCHYG00000018987)	CMC4 (ENSCHYG00000018917)	MTCP1 (ENSCHYG00000018801)
Percora_a	ANCESTRAL SPECIES	35					ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.a.b.a.a ##23	ENSGT00390000003897.s.b.a.a.b.b ##23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37
Bovidae	ANCESTRAL SPECIES	33		ENSGT00960000186859	ENSGT00410000025802.g.b ##9	ENSGT01030000235238.f	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.a.b.b ##23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506
Bovinae	ANCESTRAL SPECIES	46			ENSGT00960000186859	ENSGT00410000025802.g.b ##9	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.a.b.b ##23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506
Bos	ANCESTRAL SPECIES	36	ENSGT00940000162668	ENSGT00960000186859	ENSGT00410000025802.g.b ##9	ENSGT00530000063808.a #10	ENSGT01100000263481.n.a.b.b.a.a.b.b	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.a.b.b ##23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506
Bos_a	ANCESTRAL SPECIES	39	ENSGT00910000144363.g.a.a.a.a.a	ENSGT00910000144363.g.a.a.a.a.b	ENSGT00940000154891	ENSGT00410000025802.g.b ##9	ENSGT00530000063808.a #10	ENSGT01100000263481.n.a.b.b.a.a.b.b	ENSGT00530000063435.a #11	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.a ##23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506
Domestic yak	MODERN SPECIES	69	ENSBGRG00000026327	ENSBGRG00000026324	ENSBGRG00000026319	ENSBGRG00000026315	ENSBGRG00000026304 ##9	IKBKG (ENSBGRG00000026284) #10	ENSBGRG00000026272	G6PD (ENSBGRG00000026248) #11	SLC10A3 (ENSBGRG00000026237) #13	UBL4A (ENSBGRG00000026234) #14	ENSBGRG00000026228 #15	PLXNA3 (ENSBGRG00000024820) #16	FAM50A (ENSBGRG00000024395) #17	ATP6AP1 (ENSBGRG00000024299) #19	TAFAZZIN (ENSBGRG00000024079) #20	DNASE1L1 (ENSBGRG00000024010) #22	ENSBGRG00000023896 ##23	EMD (ENSBGRG00000023778) #24	GDI1 (ENSBGRG00000023696) #18	FLNA (ENSBGRG00000023487) #25	TKTL1 (ENSBGRG00000023403) #26	ENSBGRG00000023305 #28	MECP2 (ENSBGRG00000023220) #30	IRAK1 (ENSBGRG00000023042) #32	TMEM187 (ENSBGRG00000023012)	HCFC1 (ENSBGRG00000021965) #33	RENBP (ENSBGRG00000021852) #34	NAA10 (ENSBGRG00000021764) #35	ARHGAP4 (ENSBGRG00000021595) #36	AVPR2 (ENSBGRG00000021537) #37	L1CAM (ENSBGRG00000020974)
Wild yak	MODERN SPECIES	2585						IKBKG (ENSBMUG00000026904) #10	G6PD (ENSBMUG00000026905) #11	SLC10A3 (ENSBMUG00000026906) #13	UBL4A (ENSBMUG00000026907) #14	LAGE3 (ENSBMUG00000026908) #15	PLXNA3 (ENSBMUG00000026909) #16	FAM50A (ENSBMUG00000026910) #17	GDI1 (ENSBMUG00000026911) #18	ATP6AP1 (ENSBMUG00000026912) #19	TAFAZZIN (ENSBMUG00000026914) #20	DNASE1L1 (ENSBMUG00000026915) #22	ENSBMUG00000026916 ##23
Bos_b	ANCESTRAL SPECIES	31	ENSGT00960000186859	ENSGT00410000025802.g.b ##9	ENSGT00940000160561.d.b	ENSGT00530000063808.a #10	ENSGT01100000263481.n.a.b.b.a.a.b.b	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.a.b.b ##23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506
Hybrid Bos Indicus	MODERN SPECIES	315	ENSBIXG00005014316	ENSBIXG00005001881 ##9	ENSBIXG00005014255	ENSBIXG00005000250	IKBKG (ENSBIXG00005014233) #10	G6PD (ENSBIXG00005014158) #11	ENSBIXG00005014028	SLC10A3 (ENSBIXG00005013999) #13	ENSBIXG00005013979 #14	LAGE3 (ENSBIXG00005006122) #15	PLXNA3 (ENSBIXG00005013935) #16	FAM50A (ENSBIXG00005013872) #17	GDI1 (ENSBIXG00005001727) #18	ATP6AP1 (ENSBIXG00005001714) #19	ENSBIXG00005013746 #20	DNASE1L1 (ENSBIXG00005005490) #22	ENSBIXG00005001627 ##23	EMD (ENSBIXG00005013423) #24	FLNA (ENSBIXG00005013367) #25	TKTL1 (ENSBIXG00005013244) #26	TEX28 (ENSBIXG00005013213) #27	ENSBIXG00005013198 #28	MECP2 (ENSBIXG00005013169) #30	ENSBIXG00005013100	IRAK1 (ENSBIXG00005013081) #32	TMEM187 (ENSBIXG00005013053)	HCFC1 (ENSBIXG00005013025) #33	RENBP (ENSBIXG00005007005) #34	NAA10 (ENSBIXG00005012916) #35	ARHGAP4 (ENSBIXG00005001429) #36	AVPR2 (ENSBIXG00005012700) #37
Cow	MODERN SPECIES	177	ENSBTAG00000055292	ENSBTAG00000048914 ##9	ENSBTAG00000001900	IKBKG (ENSBTAG00000006268) #10	ENSBTAG00000053534	G6PD (ENSBTAG00000019512) #11	FAM3A (ENSBTAG00000012747) #12	SLC10A3 (ENSBTAG00000014333) #13	UBL4A (ENSBTAG00000014331) #14	LAGE3 (ENSBTAG00000054868) #15	PLXNA3 (ENSBTAG00000008552) #16	FAM50A (ENSBTAG00000033032) #17	GDI1 (ENSBTAG00000012125) #18	ATP6AP1 (ENSBTAG00000012117) #19	TAFAZZIN (ENSBTAG00000007456) #20	DNASE1L1 (ENSBTAG00000007455) #22	RPL10 (ENSBTAG00000007454) ##23	EMD (ENSBTAG00000022314) #24	FLNA (ENSBTAG00000011190) #25	TKTL1 (ENSBTAG00000020127) #26	TEX28 (ENSBTAG00000020300) #27	OPN1LW (ENSBTAG00000020299) #28	ENSBTAG00000052492	MECP2 (ENSBTAG00000047855) #30	IRAK1 (ENSBTAG00000016085) #32	TMEM187 (ENSBTAG00000008278)	HCFC1 (ENSBTAG00000011904) #33	RENBP (ENSBTAG00000047827) #34	NAA10 (ENSBTAG00000047702) #35	ARHGAP4 (ENSBTAG00000047531) #36	AVPR2 (ENSBTAG00000047138) #37
American bison	MODERN SPECIES	2023																DNASE1L1 (ENSBBBG00000025218) #22
Caprinae	ANCESTRAL SPECIES	45					ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.a.b.a.a ##23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506
Rambouillet Sheep	MODERN SPECIES	205	ENSOARG00020018581 ##9	ENSOARG00020018615	ENSOARG00020018678	ENSOARG00020018703	ENSOARG00020018745 ##9	ENSOARG00020018798 #15	IKBKG (ENSOARG00020018901) #10	G6PD (ENSOARG00020019292) #11	SLC10A3 (ENSOARG00020019833) #13	UBL4A (ENSOARG00020019884) #14	PLXNA3 (ENSOARG00020019933) #16	FAM50A (ENSOARG00020020129) #17	GDI1 (ENSOARG00020020178) #18	ATP6AP1 (ENSOARG00020020475) #19	TAFAZZIN (ENSOARG00020020574) #20	DNASE1L1 (ENSOARG00020021378) #22	RPL10 (ENSOARG00020021458) ##23	EMD (ENSOARG00020021549) #24	FLNA (ENSOARG00020021631) #25	TKTL1 (ENSOARG00020021994) #26	OPN1LW (ENSOARG00020022140) #28	MECP2 (ENSOARG00020022209) #30	IRAK1 (ENSOARG00020022349) #32	TMEM187 (ENSOARG00020022375)	HCFC1 (ENSOARG00020022415) #33	RENBP (ENSOARG00020023053) #34	NAA10 (ENSOARG00020023246) #35	ARHGAP4 (ENSOARG00020023326) #36	AVPR2 (ENSOARG00020023848) #37	L1CAM (ENSOARG00020023921)	PDZD4 (ENSOARG00020024315)
Goat	MODERN SPECIES	247											PLXNA3 (ENSCHIG00000022124) #16	FAM50A (ENSCHIG00000002986) #17	GDI1 (ENSCHIG00000011309) #18	ATP6AP1 (ENSCHIG00000006977) #19	TAFAZZIN (ENSCHIG00000014783) #20	DNASE1L1 (ENSCHIG00000021139) #22	ENSCHIG00000025239 ##23
Siberian musk deer	MODERN SPECIES	14				ENSMMSG00000013493 ##9	IKBKG (ENSMMSG00000013522) #10	G6PD (ENSMMSG00000013593) #11	ENSMMSG00000013656 #12	SLC10A3 (ENSMMSG00000013825) #13	UBL4A (ENSMMSG00000013839) #14	LAGE3 (ENSMMSG00000013858) #15	PLXNA3 (ENSMMSG00000013876) #16	ENSMMSG00000013933 #17	GDI1 (ENSMMSG00000013993) #18	ATP6AP1 (ENSMMSG00000014033) #19	TAFAZZIN (ENSMMSG00000014064) #20	ENSMMSG00000014152 #22	ENSMMSG00000014213 ##23	EMD (ENSMMSG00000014247) #24	FLNA (ENSMMSG00000014357) #25	TKTL1 (ENSMMSG00000015211) #26	TEX28 (ENSMMSG00000015249) #27	ENSMMSG00000015261 #28	ENSMMSG00000015287 #30	IRAK1 (ENSMMSG00000015351) #32	TMEM187 (ENSMMSG00000015428)	HCFC1 (ENSMMSG00000015453) #33	RENBP (ENSMMSG00000015497) #34	NAA10 (ENSMMSG00000015542) #35	ARHGAP4 (ENSMMSG00000015607) #36	AVPR2 (ENSMMSG00000015654) #37	L1CAM (ENSMMSG00000015717)
Camelidae	ANCESTRAL SPECIES	80								ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.a.b ##23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00910000146917 #31	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37
Arabian camel	MODERN SPECIES	204	ENSCDRG00005017097 #9	GAB3 (ENSCDRG00005016636) #8	ENSCDRG00005016586 ##9	ENSCDRG00005016563 #9	ENSCDRG00005016521 ##9	ENSCDRG00005016489	IKBKG (ENSCDRG00005016363) #10	G6PD (ENSCDRG00005016281) #11	FAM3A (ENSCDRG00005016065) #12	SLC10A3 (ENSCDRG00005016014) #13	LAGE3 (ENSCDRG00005015984) #15	FAM50A (ENSCDRG00005012822) #17	GDI1 (ENSCDRG00005012702) #18	ATP6AP1 (ENSCDRG00005012618) #19	TAZ (ENSCDRG00005012375) #20	DNASE1L1 (ENSCDRG00005012179) #22	ENSCDRG00005012077 ##23	ENSCDRG00005011914 #24	FLNA (ENSCDRG00005011684) #25	TKTL1 (ENSCDRG00005011584) #26	TEX28 (ENSCDRG00005011542) #27	ENSCDRG00005011483 #28	MECP2 (ENSCDRG00005011374) #30	ENSCDRG00005011350 #31	IRAK1 (ENSCDRG00005011306) #32	TMEM187 (ENSCDRG00005011270)	HCFC1 (ENSCDRG00005010537) #33	RENBP (ENSCDRG00005010267) #34	NAA10 (ENSCDRG00005010090) #35	ARHGAP4 (ENSCDRG00005009571) #36	AVPR2 (ENSCDRG00005009433) #37
Alpaca	MODERN SPECIES	3428																ENSVPAG00000009964 #22
Laurasiatheria_b	ANCESTRAL SPECIES	10	ENSGT00940000159803 #8	ENSGT00410000025802.g.b ##9	ENSGT00410000025802.h #9	ENSGT01050000244815.B.a.a	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00910000146500
Carnivora	ANCESTRAL SPECIES	11	ENSGT00940000159803 #8	ENSGT01050000244815.B.a.a	ENSGT00410000025802.g.b ##9	ENSGT00410000025802.h #9	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506
Caniformia	ANCESTRAL SPECIES	22	ENSGT00940000159803 #8	ENSGT01050000244815.B.a.a	ENSGT00410000025802.g.b ##9	ENSGT00410000025802.h #9	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00940000153588.b #25	ENSGT00390000002034 #24	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506
Caniformia_b	ANCESTRAL SPECIES	27	ENSGT00510000047092 #7	ENSGT00940000159803 #8	ENSGT00410000025802.g.b ##9	ENSGT01030000235238.c	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.h #9	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506
Ursidae	ANCESTRAL SPECIES	45	ENSGT00940000158744.p	ENSGT00510000047092 #7	ENSGT00940000159803 #8	ENSGT00410000025802.g.b ##9	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.h #9	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.a.b ##23	ENSGT00940000153588.b #25	ENSGT00390000002034 #24	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506
Ursus	ANCESTRAL SPECIES	220					ENSGT00410000025802.h #9	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.a.b ##23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25
American black bear	MODERN SPECIES	939														ATP6AP1 (ENSUAMG00000020536) #19	ENSUAMG00000020457 #20	DNASE1L1 (ENSUAMG00000020456) #22	ENSUAMG00000020454 ##23	EMD (ENSUAMG00000020453) #24
Polar bear	MODERN SPECIES	330						ENSUMAG00000019262	ENSUMAG00000019269 #9	IKBKG (ENSUMAG00000019273) #10	G6PD (ENSUMAG00000019300) #11	FAM3A (ENSUMAG00000019452) #12	SLC10A3 (ENSUMAG00000019457) #13	FAM50A (ENSUMAG00000019470) #17	GDI1 (ENSUMAG00000019473) #18	ATP6AP1 (ENSUMAG00000019476) #19	ENSUMAG00000019531 #20	DNASE1L1 (ENSUMAG00000019505) #22	ENSUMAG00000019583 ##23	FLNA (ENSUMAG00000019645) #25	EMD (ENSUMAG00000020684) #24	TKTL1 (ENSUMAG00000020693) #26	TEX28 (ENSUMAG00000020707) #27	ENSUMAG00000020714 #28	ENSUMAG00000020747 #30	TMEM187 (ENSUMAG00000020759)	ENSUMAG00000020761	RENBP (ENSUMAG00000020768) #34	NAA10 (ENSUMAG00000020773) #35	SSR4 (ENSUMAG00000020804)	IDH3G (ENSUMAG00000020814)	SRPK3 (ENSUMAG00000020820)	BCAP31 (ENSUMAG00000020844)
Giant Panda	MODERN SPECIES	2288	DKC1 (ENSAMEG00000002776) #7	GAB3 (ENSAMEG00000001366) #8	ENSAMEG00000019282	ENSAMEG00000019272	IKBKG (ENSAMEG00000000410) #10	G6PD (ENSAMEG00000000366) #11	FAM3A (ENSAMEG00000000362) #12	SLC10A3 (ENSAMEG00000000359) #13	UBL4A (ENSAMEG00000026286) #14	ENSAMEG00000026988 #9	PLXNA3 (ENSAMEG00000000281) #16	FAM50A (ENSAMEG00000000273) #17	GDI1 (ENSAMEG00000000265) #18	ATP6AP1 (ENSAMEG00000000239) #19	ENSAMEG00000000230 #20	ENSAMEG00000000229 #22	RPL10 (ENSAMEG00000000227) #23	ENSAMEG00000030923	ENSAMEG00000007261 #25	ENSAMEG00000007222 #24	ENSAMEG00000018441 #26	TEX28 (ENSAMEG00000018444) #27	ENSAMEG00000018445 #28	MECP2 (ENSAMEG00000029148) #30	IRAK1 (ENSAMEG00000018449) #32	TMEM187 (ENSAMEG00000019206)	HCFC1 (ENSAMEG00000018450) #33	RENBP (ENSAMEG00000018452) #34	NAA10 (ENSAMEG00000018457) #35	ARHGAP4 (ENSAMEG00000018458) #36	AVPR2 (ENSAMEG00000018460) #37
Mustelinae	ANCESTRAL SPECIES	108					ENSGT00410000025802.h #9	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506
American mink	MODERN SPECIES	402							ENSNVIG00000023588	SMIM9 (ENSNVIG00000023589)	MPP1 (ENSNVIG00000023597)	DKC1 (ENSNVIG00000023613) #7	GAB3 (ENSNVIG00000023627) #8	PLXNA3 (ENSNVIG00000023655) #16	GDI1 (ENSNVIG00000023807) #18	ATP6AP1 (ENSNVIG00000023809) #19	ENSNVIG00000023810 #20	DNASE1L1 (ENSNVIG00000023816) #22	ENSNVIG00000023818 #23	EMD (ENSNVIG00000023823) #24	FLNA (ENSNVIG00000023832) #25	TKTL1 (ENSNVIG00000023854) #26	TEX28 (ENSNVIG00000023857) #27	ENSNVIG00000023859 #28	MECP2 (ENSNVIG00000023863) #30	IRAK1 (ENSNVIG00000023867) #32	ENSNVIG00000023868	HCFC1 (ENSNVIG00000023869) #33	RENBP (ENSNVIG00000023874) #34	NAA10 (ENSNVIG00000023879) #35	ARHGAP4 (ENSNVIG00000023893) #36	AVPR2 (ENSNVIG00000023918) #37	L1CAM (ENSNVIG00000023921)
Ferret	MODERN SPECIES	531				ENSMPUG00000019515	ENSMPUG00000009840	IKBKG (ENSMPUG00000009835) #10	G6PD (ENSMPUG00000009722) #11	FAM3A (ENSMPUG00000009671) #12	SLC10A3 (ENSMPUG00000019511) #13	UBL4A (ENSMPUG00000009650) #14	PLXNA3 (ENSMPUG00000009629) #16	ENSMPUG00000009476 #17	GDI1 (ENSMPUG00000009461) #18	ATP6AP1 (ENSMPUG00000009450) #19	TAFAZZIN (ENSMPUG00000009363) #20	DNASE1L1 (ENSMPUG00000009354) #22	ENSMPUG00000009320 #23	FLNA (ENSMPUG00000009293) #25	EMD (ENSMPUG00000009232) #24	ENSMPUG00000019510	TKTL1 (ENSMPUG00000009214) #26	TEX28 (ENSMPUG00000009202) #27	ENSMPUG00000009081 #28	MECP2 (ENSMPUG00000009072) #30	IRAK1 (ENSMPUG00000009059) #32	ENSMPUG00000009052	HCFC1 (ENSMPUG00000009029) #33	NAA10 (ENSMPUG00000008989) #35	AVPR2 (ENSMPUG00000008979) #37	ARHGAP4 (ENSMPUG00000008967) #36	L1CAM (ENSMPUG00000008943)
Canidae	ANCESTRAL SPECIES	50	ENSGT00940000159803 #8	ENSGT00410000025802.g.b ##9	ENSGT00410000025802.h #9	ENSGT01050000244815.B.a.a	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00940000153588.b #25	ENSGT00390000002034 #24	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506
Canis_lupus	ANCESTRAL SPECIES	22	ENSGT00410000025802.g.b.k ##9	ENSGT00410000025802.h #9	ENSGT01050000244815.B.a.a	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a.h #15	ENSGT00410000025802.g.a.g #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00940000153588.b #25	ENSGT00390000002034 #24	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506
Dingo	MODERN SPECIES	383	ENSCAFG00020008968 #15	ENSCAFG00020008976 #9	ENSCAFG00020008985	ENSCAFG00020008988	IKBKG (ENSCAFG00020008992) #10	G6PD (ENSCAFG00020008999) #11	FAM3A (ENSCAFG00020009021) #12	SLC10A3 (ENSCAFG00020009027) #13	UBL4A (ENSCAFG00020009032) #14	ENSCAFG00020009037 #15	PLXNA3 (ENSCAFG00020009040) #16	FAM50A (ENSCAFG00020009064) #17	GDI1 (ENSCAFG00020009070) #18	ATP6AP1 (ENSCAFG00020009077) #19	TAFAZZIN (ENSCAFG00020009089) #20	DNASE1L1 (ENSCAFG00020009104) #22	ENSCAFG00020009114 #23	FLNA (ENSCAFG00020009434) #25	EMD (ENSCAFG00020022046) #24	TKTL1 (ENSCAFG00020022053) #26	ENSCAFG00020022055	TEX28 (ENSCAFG00020022059) #27	ENSCAFG00020022061 #28	MECP2 (ENSCAFG00020022079) #30	IRAK1 (ENSCAFG00020022089) #32	HCFC1 (ENSCAFG00020022091) #33	RENBP (ENSCAFG00020022111) #34	NAA10 (ENSCAFG00020022123) #35	ARHGAP4 (ENSCAFG00020022156) #36	AVPR2 (ENSCAFG00020022923) #37	L1CAM (ENSCAFG00020022925)
Dog	MODERN SPECIES	144	LAGE3 (ENSCAFG00845029708) #15	ENSCAFG00845029697 ##9	ENSCAFG00845029686 #9	cOR7R1 (ENSCAFG00845029673)	IKBKG (ENSCAFG00845029634) #10	G6PD (ENSCAFG00845029388) #11	ENSCAFG00845029578 #12	SLC10A3 (ENSCAFG00845029316) #13	UBL4A (ENSCAFG00845029287) #14	ENSCAFG00845029273 #15	PLXNA3 (ENSCAFG00845029121) #16	FAM50A (ENSCAFG00845029041) #17	ATP6AP1 (ENSCAFG00845029004) #19	GDI1 (ENSCAFG00845028921) #18	TAZ (ENSCAFG00845028739) #20	DNASE1L1 (ENSCAFG00845028675) #22	RPL10 (ENSCAFG00845028627) #23	FLNA (ENSCAFG00845027901) #25	EMD (ENSCAFG00845027618) #24	TKTL1 (ENSCAFG00845027442) #26	TEX28 (ENSCAFG00845027400) #27	OPN1LW (ENSCAFG00845027363) #28	MECP2 (ENSCAFG00845027255) #30	IRAK1 (ENSCAFG00845027126) #32	TMEM187 (ENSCAFG00845027090)	HCFC1 (ENSCAFG00845026790) #33	RENBP (ENSCAFG00845026554) #35	ARHGAP4 (ENSCAFG00845026108) #36	AVPR2 (ENSCAFG00845026015) #37	L1CAM (ENSCAFG00845025647)	PDZD4 (ENSCAFG00845025486)
Red fox	MODERN SPECIES	263							IKBKG (ENSVVUG00000029536) #10	G6PD (ENSVVUG00000029537) #11	FAM3A (ENSVVUG00000029538) #12	SLC10A3 (ENSVVUG00000029540) #13	PLXNA3 (ENSVVUG00000029541) #16	ENSVVUG00000029545 #17	GDI1 (ENSVVUG00000029546) #18	ATP6AP1 (ENSVVUG00000029548) #19	TAZ (ENSVVUG00000029551) #20	DNASE1L1 (ENSVVUG00000029556) #22	RPL10 (ENSVVUG00000029559) #23	FLNA (ENSVVUG00000029569) #25	EMD (ENSVVUG00000029577) #24	TEX28 (ENSVVUG00000029579) #27	TKTL1 (ENSVVUG00000029580) #26	ENSVVUG00000029585 #28	MECP2 (ENSVVUG00000029591) #30	IRAK1 (ENSVVUG00000029594) #32	TMEM187 (ENSVVUG00000029595)	HCFC1 (ENSVVUG00000029596) #33	RENBP (ENSVVUG00000029602) #34	NAA10 (ENSVVUG00000029603) #35	ARHGAP4 (ENSVVUG00000029605) #36	AVPR2 (ENSVVUG00000029607) #37	L1CAM (ENSVVUG00000029611)
Felidae	ANCESTRAL SPECIES	29	ENSGT00390000005685	ENSGT00940000158744.m	ENSGT00510000047092 #7	ENSGT00940000159803 #8	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506
Panthera	ANCESTRAL SPECIES	65					ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23
Panthera_a	ANCESTRAL SPECIES	76					ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23
lion	MODERN SPECIES	113						IKBKG (ENSPLOG00000008081) #10	G6PD (ENSPLOG00000008022) #11	FAM3A (ENSPLOG00000007925) #12	SLC10A3 (ENSPLOG00000007885) #13	LAGE3 (ENSPLOG00000007855) #15	PLXNA3 (ENSPLOG00000007506) #16	FAM50A (ENSPLOG00000007410) #17	GDI1 (ENSPLOG00000007386) #18	ATP6AP1 (ENSPLOG00000007351) #19	ENSPLOG00000007302 #20	DNASE1L1 (ENSPLOG00000007262) #22	ENSPLOG00000007204 #23
leopard	MODERN SPECIES	303							IKBKG (ENSPPRG00000017843) #10	G6PD (ENSPPRG00000018173) #11	FAM3A (ENSPPRG00000018526) #12	SLC10A3 (ENSPPRG00000018639) #13	ENSPPRG00000019153 #14	FAM50A (ENSPPRG00000020113) #17	GDI1 (ENSPPRG00000020392) #18	ATP6AP1 (ENSPPRG00000020575) #19	TAFAZZIN (ENSPPRG00000020887) #20	DNASE1L1 (ENSPPRG00000021313) #22	ENSPPRG00000021464 ##23
Cat	MODERN SPECIES	252	MPP1 (ENSFCAG00000006578)	DKC1 (ENSFCAG00000006577) #7	GAB3 (ENSFCAG00000006576) #8	ENSFCAG00000048808	IKBKG (ENSFCAG00000029840) #10	G6PD (ENSFCAG00000043880) #11	FAM3A (ENSFCAG00000035237) #12	SLC10A3 (ENSFCAG00000022989) #13	UBL4A (ENSFCAG00000025607) #14	LAGE3 (ENSFCAG00000038204) #15	PLXNA3 (ENSFCAG00000011400) #16	FAM50A (ENSFCAG00000011399) #17	GDI1 (ENSFCAG00000011398) #18	ATP6AP1 (ENSFCAG00000011397) #19	TAFAZZIN (ENSFCAG00000023652) #20	DNASE1L1 (ENSFCAG00000011396) #22	ENSFCAG00000011395 #23	EMD (ENSFCAG00000011394) #24	FLNA (ENSFCAG00000011393) #25	TKTL1 (ENSFCAG00000011392) #26	TEX28 (ENSFCAG00000044525) #27	OPN1LW (ENSFCAG00000011390) #28	MECP2 (ENSFCAG00000011389) #30	IRAK1 (ENSFCAG00000010847) #32	TMEM187 (ENSFCAG00000011388)	HCFC1 (ENSFCAG00000011387) #33	RENBP (ENSFCAG00000018690) #34	NAA10 (ENSFCAG00000028705) #35	AVPR2 (ENSFCAG00000011384) #37	L1CAM (ENSFCAG00000008614)	ARHGAP4 (ENSFCAG00000011385) #36
Laurasiatheria_c	ANCESTRAL SPECIES	10	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092 #7	ENSGT00940000159803 #8	ENSGT00410000025802.g.b ##9	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.a.b ##23	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37
Equus	ANCESTRAL SPECIES	52	ENSGT00510000047092 #7	ENSGT00940000159803 #8	ENSGT00410000025802.g.b.m ##9	ENSGT00410000025802.g.b.n ##9	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506
Horse	MODERN SPECIES	480	ENSECAG00000031652 ##9	ENSECAG00000056189	ENSECAG00000029643 ##9	ENSECAG00000033189	IKBKG (ENSECAG00000020595) #10	G6PD (ENSECAG00000014994) #11	FAM3A (ENSECAG00000013840) #12	SLC10A3 (ENSECAG00000013796) #13	UBL4A (ENSECAG00000013506) #14	LAGE3 (ENSECAG00000038130) #15	PLXNA3 (ENSECAG00000025088) #16	FAM50A (ENSECAG00000023594) #17	GDI1 (ENSECAG00000017687) #18	ATP6AP1 (ENSECAG00000014216) #19	TAFAZZIN (ENSECAG00000010872) #20	DNASE1L1 (ENSECAG00000003758) #22	RPL10 (ENSECAG00000017154) ##23	FLNA (ENSECAG00000009550) #25	EMD (ENSECAG00000013908) #24	TKTL1 (ENSECAG00000021992) #26	TEX28 (ENSECAG00000021904) #27	OPN1LW (ENSECAG00000018684) #28	MECP2 (ENSECAG00000018208) #30	IRAK1 (ENSECAG00000009585) #32	TMEM187 (ENSECAG00000001086)	HCFC1 (ENSECAG00000022440) #33	RENBP (ENSECAG00000018888) #34	NAA10 (ENSECAG00000015203) #35	ARHGAP4 (ENSECAG00000023201) #36	AVPR2 (ENSECAG00000022974) #37	L1CAM (ENSECAG00000002810)
Donkey	MODERN SPECIES	36	ENSEASG00005034297 ##9	ENSEASG00005028284	ENSEASG00005031374	ENSEASG00005027434	ENSEASG00005032016 ##9	ENSEASG00005032513 #10	G6PD (ENSEASG00005018430) #11	FAM3A (ENSEASG00005018431) #12	SLC10A3 (ENSEASG00005018434) #13	UBL4A (ENSEASG00005018436) #14	PLXNA3 (ENSEASG00005018440) #16	FAM50A (ENSEASG00005018449) #17	GDI1 (ENSEASG00005018454) #18	ATP6AP1 (ENSEASG00005034458) #19	TAFAZZIN (ENSEASG00005025100) #20	DNASE1L1 (ENSEASG00005028299) #22	ENSEASG00005025120 #23	EMD (ENSEASG00005019177) #24	FLNA (ENSEASG00005018577) #25	TKTL1 (ENSEASG00005019179) #26	TEX28 (ENSEASG00005019182) #27	ENSEASG00005019183 #28	MECP2 (ENSEASG00005019188) #30	IRAK1 (ENSEASG00005019196) #32	TMEM187 (ENSEASG00005038494)	HCFC1 (ENSEASG00005019244) #33	RENBP (ENSEASG00005019286) #34	NAA10 (ENSEASG00005030165) #35	ARHGAP4 (ENSEASG00005019296) #36	AVPR2 (ENSEASG00005027808) #37	L1CAM (ENSEASG00005019353)
Chiroptera	ANCESTRAL SPECIES	48	ENSGT00410000025802.h #9	ENSGT01030000238159	ENSGT01050000244815.B.a.a	ENSGT00410000025802.g.b ##9	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.a.a ##23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00910000146500
Microchiroptera	ANCESTRAL SPECIES	45	ENSGT00410000025802.h #9	ENSGT01030000238159	ENSGT01050000244815.B.a.a	ENSGT00410000025802.g.b ##9	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.g.a #15	ENSGT01050000244850.A.a #16	ENSGT00390000004735.A #17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.a.a ##23	ENSGT00390000002034 #24	ENSGT00940000153588.b #25	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506
Greater horseshoe bat	MODERN SPECIES		ENSRFEG00010002889	ENSRFEG00010002921	ENSRFEG00010002963 ##9	ENSRFEG00010002995 ##9	IKBKG (ENSRFEG00010003030) #10	G6PD (ENSRFEG00010003111) #11	FAM3A (ENSRFEG00010003196) #12	SLC10A3 (ENSRFEG00010003285) #13	UBL4A (ENSRFEG00010003315) #14	LAGE3 (ENSRFEG00010003340) #15	PLXNA3 (ENSRFEG00010003374) #16	FAM50A (ENSRFEG00010003417) #17	GDI1 (ENSRFEG00010003480) #18	ATP6AP1 (ENSRFEG00010003617) #19	TAZ (ENSRFEG00010003720) #20	BT_m006_jsm59FD5r (ENSRFEG00010003791) #22	RPL10 (ENSRFEG00010003909) ##23	EMD (ENSRFEG00010004008) #24	FLNA (ENSRFEG00010004101) #25	TKTL1 (ENSRFEG00010004159) #26	TEX28 (ENSRFEG00010004212) #27	ENSRFEG00010004230 #28	MECP2 (ENSRFEG00010004285) #30	IRAK1 (ENSRFEG00010004369) #32	TMEM187 (ENSRFEG00010004460)	HCFC1 (ENSRFEG00010004542) #33	RENBP (ENSRFEG00010004689) #34	ARD1A (ENSRFEG00010004730) #35	ARHGAP4 (ENSRFEG00010004760) #36	AVPR2 (ENSRFEG00010004785) #37	ENSRFEG00010004798
Microbat	MODERN SPECIES	977				ENSMLUG00000025335	IKBKG (ENSMLUG00000027075) #10	G6PD (ENSMLUG00000008210) #11	FAM3A (ENSMLUG00000005226) #12	SLC10A3 (ENSMLUG00000008199) #13	UBL4A (ENSMLUG00000027145) #14	ENSMLUG00000030030 #15	PLXNA3 (ENSMLUG00000010006) #16	GDI1 (ENSMLUG00000003501) #18	ENSMLUG00000022234 #17	ATP6AP1 (ENSMLUG00000003493) #19	TAFAZZIN (ENSMLUG00000024037) #20	DNASE1L1 (ENSMLUG00000014342) #22	ENSMLUG00000014337 ##23	FLNA (ENSMLUG00000014316) #25	EMD (ENSMLUG00000005200) #24	TKTL1 (ENSMLUG00000014306) #26	TEX28 (ENSMLUG00000014304) #27	ENSMLUG00000014299 #28	ENSMLUG00000024727	MECP2 (ENSMLUG00000014297) #30	IRAK1 (ENSMLUG00000014288) #32	TMEM187 (ENSMLUG00000014286)	HCFC1 (ENSMLUG00000014275) #33	RENBP (ENSMLUG00000014271) #34	NAA10 (ENSMLUG00000014267) #35	ARHGAP4 (ENSMLUG00000014257) #36	AVPR2 (ENSMLUG00000014253) #37
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00950000182846.a.a.a.a.a #22
Common shrew	MODERN SPECIES	9950																DNASE1L1 (ENSSARG00000007827) #22
Atlantogenata	ANCESTRAL SPECIES	70	ENSGT00510000047092 #7	ENSGT00940000159803 #8	ENSGT01100000263574.b.j	ENSGT01050000244815.B.a.a	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.h #9	ENSGT01050000244850.A.a #16	ENSGT00390000004735.C ##17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00940000153588.b #25	ENSGT00390000002034 #24	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00940000166196	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37
Afrotheria	ANCESTRAL SPECIES	82	ENSGT00510000047092 #7	ENSGT00940000159803 #8	ENSGT01100000263574.b.j	ENSGT01050000244815.B.a.a	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.h #9	ENSGT01050000244850.A.a #16	ENSGT00390000004735.C ##17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.a ##23	ENSGT00940000153588.b #25	ENSGT00390000002034 #24	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00940000162426 #26	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00940000166196	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37
Afrotheria_a	ANCESTRAL SPECIES	81	ENSGT00510000047092 #7	ENSGT00940000159803 #8	ENSGT01100000263574.b.j	ENSGT01050000244815.B.a.a	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802.h #9	ENSGT01050000244850.A.a #16	ENSGT00390000004735.C ##17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.a ##23	ENSGT00940000153588.b #25	ENSGT00390000002034 #24	ENSGT00940000162843 #27	ENSGT01030000234549.a.a.a.b #28	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00940000166196	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36	ENSGT01050000244882.b.c.b #37	ENSGT00940000157506
Elephant	MODERN SPECIES	50	DKC1 (ENSLAFG00000000221) #7	GAB3 (ENSLAFG00000001708) #8	ENSLAFG00000028603	ENSLAFG00000010146	IKBKG (ENSLAFG00000026529) #10	G6PD (ENSLAFG00000010694) #11	FAM3A (ENSLAFG00000032131) #12	SLC10A3 (ENSLAFG00000011108) #13	UBL4A (ENSLAFG00000022192) #14	ENSLAFG00000016044 #9	PLXNA3 (ENSLAFG00000031276) #16	ENSLAFG00000008766 ##17	GDI1 (ENSLAFG00000008761) #18	ATP6AP1 (ENSLAFG00000008757) #19	TAFAZZIN (ENSLAFG00000003502) #20	DNASE1L1 (ENSLAFG00000003498) #22	ENSLAFG00000031860 ##23	FLNA (ENSLAFG00000006359) #25	EMD (ENSLAFG00000005993) #24	ENSLAFG00000005145	ENSLAFG00000005142 #27	ENSLAFG00000010311 #28	ENSLAFG00000027266	MECP2 (ENSLAFG00000016292) #30	IRAK1 (ENSLAFG00000016212) #32	TMEM187 (ENSLAFG00000003455)	HCFC1 (ENSLAFG00000004418) #33	ENSLAFG00000028984	RENBP (ENSLAFG00000007027) #34	NAA10 (ENSLAFG00000007025) #35	ARHGAP4 (ENSLAFG00000014809) #36
Xenarthra	ANCESTRAL SPECIES	103						ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT01050000244850.A.a #16	ENSGT00390000004735.C ##17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.b.a.b.b #23	ENSGT00940000153588.b #25	ENSGT00390000002034 #24	ENSGT00940000162426 #26	ENSGT00940000162843 #27	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00390000011272	ENSGT00940000161383 #33	ENSGT00940000166196	ENSGT00390000013740 #34	ENSGT00550000074803 #35	ENSGT00950000182824.a.b.b #36
Armadillo	MODERN SPECIES	4500						IKBKG (ENSDNOG00000010758) #10	G6PD (ENSDNOG00000010727) #11	FAM3A (ENSDNOG00000006532) #12	SLC10A3 (ENSDNOG00000035600) #13	UBL4A (ENSDNOG00000002769) #14	PLXNA3 (ENSDNOG00000025707) #16	ENSDNOG00000041781 ##17	GDI1 (ENSDNOG00000040963) #18	ATP6AP1 (ENSDNOG00000015526) #19	TAFAZZIN (ENSDNOG00000049167) #20	DNASE1L1 (ENSDNOG00000045597) #22	ENSDNOG00000037062 #23	FLNA (ENSDNOG00000037289) #25	EMD (ENSDNOG00000048541) #24	TKTL1 (ENSDNOG00000024515) #26	TEX28 (ENSDNOG00000018401) #27	MECP2 (ENSDNOG00000013419) #30	IRAK1 (ENSDNOG00000014412) #32	TMEM187 (ENSDNOG00000003232)	HCFC1 (ENSDNOG00000047555) #33	ENSDNOG00000043559	RENBP (ENSDNOG00000024828) #34	NAA10 (ENSDNOG00000030734) #35	ARHGAP4 (ENSDNOG00000048684) #36
Marsupialia	ANCESTRAL SPECIES	39	ENSGT01100000263570.B.z	ENSGT01100000263574.b.j.b.b.a	ENSGT01030000240148	ENSGT00390000000950.c.a.g	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00940000165180	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT01050000244850.A.a #16	ENSGT00390000004735.C ##17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650.g.b #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00950000182846.a.a.a.a.b ##22	ENSGT00390000003897.s.b #23	ENSGT00940000153588.b #25	ENSGT00390000002034 #24
Marsupialia_b	ANCESTRAL SPECIES	35	ENSGT01100000263570.B.z	ENSGT01100000263574.b.j.b.b.a	ENSGT01030000240148	ENSGT00390000000950.c.a.g	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00940000165180	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT01050000244850.A.a #16	ENSGT00390000004735.C.e.a ##17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650.g.b #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00950000182846.a.a.a.a.b ##22	ENSGT00390000003897.s.b.d.b #23	ENSGT00940000153588.b #25	ENSGT00390000002034 #24
Diprotodontia	ANCESTRAL SPECIES	79	ENSGT00510000047092 #7	ENSGT00940000159803 #8	ENSGT01030000240148	ENSGT00390000000950.c.a.g	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00940000165180	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT01050000244850.A.a #16	ENSGT00390000004735.C.e.a ##17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650.g.b.a #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00950000182846.a.a.a.a.b ##22	ENSGT00390000003897.s.b.d.b #23	ENSGT00940000153588.b #25	ENSGT00390000002034 #24
Diprotodontia_a	ANCESTRAL SPECIES	74	ENSGT00510000047092 #7	ENSGT00940000159803 #8	ENSGT01030000240148	ENSGT00390000000950.c.a.g	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00940000165180	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT01050000244850.A.a #16	ENSGT00390000004735.C.e.a.b ##17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650.g.b.a #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00950000182846.a.a.a.a.b ##22	ENSGT00390000003897.s.b.d.b.a #23	ENSGT00940000153588.b #25	ENSGT00390000002034 #24	ENSGT00950000182965.a.b.b.a.a.a.b.a.b.a.b	ENSGT00940000164911	ENSGT00390000013558.f
koala	MODERN SPECIES	275	GAB3 (ENSPCIG00000027141) #8	ENSPCIG00000027140	IKBKG (ENSPCIG00000027137) #10	G6PD (ENSPCIG00000003610) #11	ENSPCIG00000009019	FAM3A (ENSPCIG00000027132) #12	SLC10A3 (ENSPCIG00000027130) #13	ENSPCIG00000027128 #14	ENSPCIG00000036040 #16	ENSPCIG00000036166 #16	ENSPCIG00000027040 ##17	GDI1 (ENSPCIG00000026947) #18	ENSPCIG00000026944 #19	TAFAZZIN (ENSPCIG00000026941) #20	ENSPCIG00000026938	ENSPCIG00000026928 #22	ENSPCIG00000026917 ##22	ENSPCIG00000026904 #23	FLNA (ENSPCIG00000026358) #25	ENSPCIG00000010081 #24	ENSPCIG00000022816	ENSPCIG00000022856	ENSPCIG00000001851	ENSPCIG00000034683
Common wonbat	MODERN SPECIES	1065	DKC1 (ENSVURG00010019113) #7	GAB3 (ENSVURG00010019104) #8	ENSVURG00010019100	ENSVURG00010019093	IKBKG (ENSVURG00010019077) #10	G6PD (ENSVURG00010019009) #11	ENSVURG00010018900	FAM3A (ENSVURG00010018864) #12	SLC10A3 (ENSVURG00010018859) #13	UBL4A (ENSVURG00010018854) #14	PLXNA3 (ENSVURG00010018841) #16	ENSVURG00010018834 ##17	GDI1 (ENSVURG00010018825) #18	ENSVURG00010018815 #19	TAFAZZIN (ENSVURG00010018809) #20	DNASE1L1 (ENSVURG00010018801) #22	ENSVURG00010018778 #23	ENSVURG00010018760	FLNA (ENSVURG00010018669) #25	ENSVURG00010018644 #24	ENSVURG00010018641	ENSVURG00010018533	ENSVURG00010018504	ENSVURG00010018501	ENSVURG00010018460
Wallaby	MODERN SPECIES	14880																ENSMEUG00000002166 #22
Tasmanian devil	MODERN SPECIES	21	ENSSHAG00000000766	GAB3 (ENSSHAG00000005588) #8	ENSSHAG00000005407	ENSSHAG00000004769	ENSSHAG00000004297	IKBKG (ENSSHAG00000003200) #10	G6PD (ENSSHAG00000002307) #11	FAM3A (ENSSHAG00000021982) #12	SLC10A3 (ENSSHAG00000027798) #13	ENSSHAG00000032311 #14	PLXNA3 (ENSSHAG00000006328) #16	ENSSHAG00000005773 ##17	GDI1 (ENSSHAG00000023206) #18	ENSSHAG00000005317 #19	ENSSHAG00000030741 #20	ENSSHAG00000001595 #22	ENSSHAG00000004015 ##22	ENSSHAG00000022273 ##23	ENSSHAG00000001055 #25	ENSSHAG00000003040 #24	ENSSHAG00000024989	ENSSHAG00000001750	ENSSHAG00000024707	ENSSHAG00000029755	ENSSHAG00000002700	ENSSHAG00000027640	ENSSHAG00000002186	ENSSHAG00000003075	ENSSHAG00000029117	ENSSHAG00000027722	ENSSHAG00000030188
Opossum	MODERN SPECIES	627	GAB3 (ENSMODG00000009236) #8	ENSMODG00000009225	ENSMODG00000009214	ENSMODG00000009196	ENSMODG00000039236	IKBKG (ENSMODG00000009175) #10	G6PD (ENSMODG00000009154) #11	ENSMODG00000009130	FAM3A (ENSMODG00000009016) #12	SLC10A3 (ENSMODG00000009006) #13	ENSMODG00000008997 #14	PLXNA3 (ENSMODG00000008980) #16	GDI1 (ENSMODG00000008798) #18	ENSMODG00000008869 #19	TAFAZZIN (ENSMODG00000008851) #20	ENSMODG00000008763 #22	ENSMODG00000008752 ##22	ENSMODG00000008731 ##23	FLNA (ENSMODG00000008710) #25	ENSMODG00000025437
Platypus	MODERN SPECIES	17	ENSOANG00000046749	ENSOANG00000036091	SEPHS2 (ENSOANG00000050756)	IKBKG (ENSOANG00000000364) #10	G6PD (ENSOANG00000000365) #11	ENSOANG00000000366	ENSOANG00000011544	FAM3A (ENSOANG00000047703) #12	SLC10A3 (ENSOANG00000043297) #13	UBL4A (ENSOANG00000048880) #14	PLXNA3 (ENSOANG00000007979) #16	ENSOANG00000004116 ##17	GDI1 (ENSOANG00000042523) #18	ENSOANG00000050800 #19	TAFAZZIN (ENSOANG00000012765) #20	ENSOANG00000049949 #22	ENSOANG00000011014 ##22	ENSOANG00000011015 ##23	FLNA (ENSOANG00000011016) #25	ENSOANG00000036188 #24	ENSOANG00000011019	ENSOANG00000011020	TKTL2 (ENSOANG00000045224)	ENSOANG00000045052 #27	OPN1LW (ENSOANG00000011023) #28	ENSOANG00000037077 ##28	ENSOANG00000040139 #30	IRAK1 (ENSOANG00000011027) #32	TMEM187 (ENSOANG00000016003)	HCFC1 (ENSOANG00000005871) #33	ENSOANG00000041748
Sauria	ANCESTRAL SPECIES	80							ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022 #14	ENSGT00410000025802 #9	ENSGT01050000244850.A.a #16	ENSGT00390000004735.C ##17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.t ##23	ENSGT00950000182846.a.a.a.a.b ##22	ENSGT00390000003897.s.a ##23	ENSGT00940000153588.b #25
Archelosauria	ANCESTRAL SPECIES	75											ENSGT01050000244850.A.a #16	ENSGT00390000004735.C ##17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00950000182846.a.a.a.a.b ##22	ENSGT00390000003897.s.a ##23	ENSGT00940000153588.b #25	ENSGT00390000003937	ENSGT00940000161880	ENSGT00940000155445	ENSGT00940000160765	ENSGT00940000155311.C
Cryptodira	ANCESTRAL SPECIES	95											ENSGT01050000244850.A.a #16	ENSGT00390000004735.C ##17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00950000182846.a.a.a.a.b ##22	ENSGT00390000003897.s.a ##23	ENSGT00940000153588.b #25	ENSGT00390000003937	ENSGT00940000161880	ENSGT00940000155445	ENSGT00940000160765	ENSGT00940000155311.C
Testudinoidea	ANCESTRAL SPECIES	51			ENSGT00390000000950.c.a	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00940000165180	ENSGT00410000025802 #9	ENSGT00730000111022 #14	ENSGT00950000182808.b.b #13	ENSGT00950000183004.a.a.a.b #12	ENSGT01050000244850.A.a.g #16	ENSGT00390000004735.C ##17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00950000182846.a.a.a.a.b ##22	ENSGT00390000003897.s.a ##23	ENSGT00940000153588.b #25	ENSGT00940000161880	ENSGT00940000155445	ENSGT00940000160765	ENSGT00940000155311.C	ENSGT00940000154471.a.a	ENSGT01060000248768	ENSGT00940000161969	ENSGT01030000234549.a.a.a.b #28	ENSGT01030000234549.a.a.a.a.a.a ##28	ENSGT00530000063687.b.b.b.j #30	ENSGT00940000160502 #32	ENSGT00390000011272
Emydidae	ANCESTRAL SPECIES	99				ENSGT00390000000950.c.a	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00940000165180.i	ENSGT00410000025802 #9	ENSGT00730000111022 #14	ENSGT00950000182808.b.b #13	ENSGT01050000244850.A.a.g #16	ENSGT00390000004735.C ##17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.s.a ##23	ENSGT00940000153588.b #25	ENSGT00940000161880	ENSGT00940000155445	ENSGT00940000160765
painted turtle	MODERN SPECIES	1100	SEPHS2 (ENSCPBG00000017210)	IKBKG (ENSCPBG00000017209) #10	G6PD (ENSCPBG00000017207) #11	ENSCPBG00000017205	ENSCPBG00000017191	ENSCPBG00000017187 #9	UBL4A (ENSCPBG00000017185) #14	FAM3A (ENSCPBG00000017182) #12	ENSCPBG00000017179 ##16	ENSCPBG00000017177 #16	ENSCPBG00000017169 #16	ENSCPBG00000017165 ##17	GDI1 (ENSCPBG00000016047) #18	ATP6AP1 (ENSCPBG00000016015) #19	TAFAZZIN (ENSCPBG00000016003) #20	DNASE1L1 (ENSCPBG00000015997) #22	ENSCPBG00000015995	ENSCPBG00000015988 ##23	FLNA (ENSCPBG00000015968) #25	DUSP9 (ENSCPBG00000015962)	CCNQ (ENSCPBG00000015958)	ATP2B3 (ENSCPBG00000014832)
Testudinidae	ANCESTRAL SPECIES	82				ENSGT00390000000950.c.a	ENSGT00530000063808.a #10	ENSGT00530000063435.a #11	ENSGT00940000165180.g	ENSGT00410000025802 #9	ENSGT00730000111022 #14	ENSGT00950000182808.b.b #13	ENSGT00950000183004.a.a.a.b #12	ENSGT01050000244850.A.a.g #16	ENSGT00390000004735.C ##17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00950000182846.a.a.a.a.b ##22	ENSGT00390000003897.s.a ##23	ENSGT00940000153588.b #25	ENSGT00390000003937	ENSGT00940000161880	ENSGT00940000155445	ENSGT00940000160765	ENSGT00940000155311.C
Abingdon island giant tortoise	MODERN SPECIES	1863													ENSCABG00000015173 ##17	GDI1 (ENSCABG00000015246) #18	ATP6AP1 (ENSCABG00000015464) #19	DNASE1L1 (ENSCABG00000015466) #22	ENSCABG00000015469 ##22	ENSCABG00000015472 ##23	FLNA (ENSCABG00000016076) #25	DUSP9 (ENSCABG00000022663)	ENSCABG00000022664	ATP2B3 (ENSCABG00000022671)
Chinese turtle	MODERN SPECIES	1033																ENSPSIG00000008479 #22	ENSPSIG00000009791 ##22	ENSPSIG00000010987 ##23
Lepidosauria	ANCESTRAL SPECIES	38	ENSGT00940000159438	ENSGT00940000155877	ENSGT00900000142661.a	ENSGT00940000156319	ENSGT00940000165056	ENSGT00940000164196	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022.m #14	ENSGT00410000025802 #9	ENSGT01050000244850.A.a #16	ENSGT00390000004735.C ##17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00950000182846.a.a.a.a.b ##22	ENSGT00390000003897.t ##23	ENSGT00950000182989.D.a.a	ENSGT00940000157877.b	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00390000011863.c	ENSGT00940000155869	ENSGT00940000162187	ENSGT00940000161880	ENSGT00940000155445	ENSGT00940000160765	ENSGT00940000155311.C	ENSGT00940000164248	ENSGT00390000003937
Episquamata	ANCESTRAL SPECIES	23	ENSGT00390000012692	ENSGT00940000159438	ENSGT00940000155877	ENSGT00940000156319	ENSGT00940000165056	ENSGT00940000164196	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022.m #14	ENSGT00410000025802 #9	ENSGT01050000244850.A.a #16	ENSGT00390000004735.C ##17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00950000182846.a.a.a.a.b ##22	ENSGT00390000003897.t ##23	ENSGT00950000182989.D.a.a	ENSGT00940000157877.b	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00390000011863.c	ENSGT00940000155869	ENSGT00940000162187	ENSGT00940000161880	ENSGT00940000155445	ENSGT00940000160765	ENSGT00940000155311.C	ENSGT00940000164248	ENSGT00390000003937
Laterata	ANCESTRAL SPECIES	7	ENSGT00390000012692	ENSGT00940000159438	ENSGT00940000155877	ENSGT00940000156319	ENSGT00940000165056	ENSGT00940000164196	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022.m #14	ENSGT00410000025802 #9	ENSGT01050000244850.A.a #16	ENSGT00390000004735.C ##17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897.t ##23	ENSGT00950000182989.D.a.a	ENSGT00940000157877.b	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00390000011863.c	ENSGT00940000155869	ENSGT00940000162187	ENSGT00940000161880	ENSGT00940000155445	ENSGT00940000160765	ENSGT00940000155311.C	ENSGT00940000164248	ENSGT00390000003937	ENSGT00940000153588.b #25
Common wall lizard	MODERN SPECIES	8	FGD1 (ENSPMRG00000021196)	GNL3L (ENSPMRG00000021260)	HUWE1 (ENSPMRG00000022312)	ENSPMRG00000023721	ENSPMRG00000023792	SLC10A3 (ENSPMRG00000023887) #13	ENSPMRG00000023888	ENSPMRG00000023889	ENSPMRG00000023891 #9	ENSPMRG00000023892	PLXNA3 (ENSPMRG00000023922) #16	ENSPMRG00000023934 ##17	GDI1 (ENSPMRG00000023935) #18	ATP6AP1 (ENSPMRG00000023936) #19	TAFAZZIN (ENSPMRG00000023937) #20	DNASE1L1 (ENSPMRG00000023938) #22	ENSPMRG00000023939 ##23	IDH3G (ENSPMRG00000023941)	SRPK3 (ENSPMRG00000023942)	PLXNB3 (ENSPMRG00000023943)	ABCD1 (ENSPMRG00000023944)	BCAP31 (ENSPMRG00000023945)	ENSPMRG00000023946	PNCK (ENSPMRG00000023947)	DUSP9 (ENSPMRG00000023948)	CCNQ (ENSPMRG00000023950)	ATP2B3 (ENSPMRG00000023951)	BGN (ENSPMRG00000021052)	HAUS7 (ENSPMRG00000021057)	FLNA (ENSPMRG00000021086) #25	ENSPMRG00000021190
Argentine black and white tegu	MODERN SPECIES	12	TSR2 (ENSSMRG00000019128)	FGD1 (ENSSMRG00000019064)	GNL3L (ENSSMRG00000019063)	HUWE1 (ENSSMRG00000003040)	ENSSMRG00000002927	ENSSMRG00000002878	FAM3A (ENSSMRG00000002877) #12	SLC10A3 (ENSSMRG00000002876) #13	UBL4A (ENSSMRG00000002875) #14	ENSSMRG00000002873 #9	PLXNA3 (ENSSMRG00000002851) #16	ENSSMRG00000002783 ##17	GDI1 (ENSSMRG00000002779) #18	ATP6AP1 (ENSSMRG00000002776) #19	TAFAZZIN (ENSSMRG00000002769) #20	DNASE1L1 (ENSSMRG00000002768) #22	ENSSMRG00000002764 ##23	IDH3G (ENSSMRG00000002761)	SRPK3 (ENSSMRG00000002758)	PLXNB3 (ENSSMRG00000002754)	ABCD1 (ENSSMRG00000002654)	BCAP31 (ENSSMRG00000002653)	ENSSMRG00000002650	PNCK (ENSSMRG00000002638)	DUSP9 (ENSSMRG00000002591)	CCNQ (ENSSMRG00000002583)	ATP2B3 (ENSSMRG00000002530)	BGN (ENSSMRG00000002508)	ENSSMRG00000002504	HAUS7 (ENSSMRG00000002500)	FLNA (ENSSMRG00000002470) #25
Toxicofera	ANCESTRAL SPECIES	6	ENSGT00390000012692	ENSGT00940000159438	ENSGT00940000155877	ENSGT00940000156319	ENSGT00940000165056	ENSGT00940000164196	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022.m #14	ENSGT00410000025802 #9	ENSGT01050000244850.A.a #16	ENSGT00390000004735.C ##17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00950000182846.a.a.a.a.b ##22	ENSGT00390000003897.t ##23	ENSGT00950000182989.D.a.a	ENSGT00940000157877.b	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00390000011863.c	ENSGT00940000155869	ENSGT00940000162187	ENSGT00940000161880	ENSGT00940000155445	ENSGT00940000160765	ENSGT00940000155311.C	ENSGT00940000164248	ENSGT00390000003937
Elapidae	ANCESTRAL SPECIES	21	ENSGT00390000012692	ENSGT00940000159438	ENSGT00940000155877	ENSGT00940000156319.l	ENSGT00940000165056	ENSGT00940000164196	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022.m #14	ENSGT00410000025802 #9	ENSGT01050000244850.A.a #16	ENSGT00390000004735.C ##17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00950000182846.a.a.a.a.b ##22	ENSGT00390000003897.t ##23	ENSGT00950000182989.D.a.a	ENSGT00940000157877.b	ENSGT01020000230394.e.a.a.b.a.b.b	ENSGT00950000182955.a.b.a	ENSGT00390000011863.c	ENSGT00940000155869	ENSGT00940000162187	ENSGT00940000161880	ENSGT00940000155445	ENSGT00940000160765	ENSGT00940000155311.C	ENSGT00940000164248	ENSGT00390000003937
Indian cobra	MODERN SPECIES	1	ENSNNAG00000014231	GNL3L (ENSNNAG00000014245)	HUWE1 (ENSNNAG00000014942)	ENSNNAG00000018596	ENSNNAG00000018634	FAM3A (ENSNNAG00000018651) #12	SLC10A3 (ENSNNAG00000018658) #13	UBL4A (ENSNNAG00000018662) #14	ENSNNAG00000018664 #9	ENSNNAG00000018666 #16	ENSNNAG00000018668 #16	ENSNNAG00000018671 ##17	GDI1 (ENSNNAG00000018677) #18	ATP6AP1 (ENSNNAG00000018685) #19	TAFAZZIN (ENSNNAG00000018691) #20	DNASE1L1 (ENSNNAG00000018696) #22	ENSNNAG00000018704 ##23	IDH3G (ENSNNAG00000018712)	ENSNNAG00000018721	ENSNNAG00000018733	ENSNNAG00000018745	ENSNNAG00000004602	ENSNNAG00000004620	ABCD1 (ENSNNAG00000004643)	BCAP31 (ENSNNAG00000004742)	ENSNNAG00000004889	PNCK (ENSNNAG00000007117)	DUSP9 (ENSNNAG00000007195)	CCNQ (ENSNNAG00000007203)	ATP2B3 (ENSNNAG00000007314)	BGN (ENSNNAG00000008914)
Elapidae_a	ANCESTRAL SPECIES	23	ENSGT00390000012692	ENSGT00940000159438	ENSGT00940000155877	ENSGT00940000156319.l	ENSGT00940000165056	ENSGT00940000164196	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022.m #14	ENSGT00410000025802 #9	ENSGT01050000244850.A.a #16	ENSGT00390000004735.C ##17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00950000182846.a.a.a.a.b ##22	ENSGT00390000003897.t ##23	ENSGT00950000182989.D.a.a	ENSGT00940000157877.b	ENSGT01020000230394.e.a.a.b.a.b.b	ENSGT00950000182955.a.b.a.e	ENSGT00950000182955.a.b.a.f	ENSGT00390000011863.c	ENSGT00940000155869	ENSGT00940000162187	ENSGT00940000161880	ENSGT00940000155445	ENSGT00940000160765	ENSGT00940000155311.C	ENSGT00940000164248
Blue-lipped sea krait	MODERN SPECIES	3395																ENSLLTG00000008769 #22	ENSLLTG00000008752 ##23
Acanthophiinae	ANCESTRAL SPECIES	23	ENSGT00390000012692	ENSGT00940000159438	ENSGT00940000155877	ENSGT00940000156319.l	ENSGT00940000165056	ENSGT00940000164196	ENSGT00950000183004.a.a.a.b #12	ENSGT00950000182808.b.b #13	ENSGT00730000111022.m #14	ENSGT00410000025802 #9	ENSGT01050000244850.A.a #16	ENSGT00390000004735.C ##17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00950000182846.a.a.a.a.b ##22	ENSGT00390000003897.t ##23	ENSGT00950000182989.D.a.a	ENSGT00940000157877.b	ENSGT01020000230394.e.a.a.b.a.b.b	ENSGT00950000182955.a.b.a.e	ENSGT00950000182955.a.b.a.f	ENSGT00390000011863.c	ENSGT00940000155869	ENSGT00940000162187	ENSGT00940000161880	ENSGT00940000155445	ENSGT00940000160765	ENSGT00940000155311.C	ENSGT00940000164248
Mainland tiger snake	MODERN SPECIES	81	FGD1 (ENSNSUG00000019745)	GNL3L (ENSNSUG00000019744)	HUWE1 (ENSNSUG00000018906)	ENSNSUG00000018905	ENSNSUG00000015779	FAM3A (ENSNSUG00000015740) #12	SLC10A3 (ENSNSUG00000015739) #13	UBL4A (ENSNSUG00000015738) #14	ENSNSUG00000015737 #9	ENSNSUG00000015736 #16	ENSNSUG00000015735 #16	ENSNSUG00000015733 ##17	GDI1 (ENSNSUG00000015732) #18	ATP6AP1 (ENSNSUG00000015714) #19	TAFAZZIN (ENSNSUG00000015706) #20	DNASE1L1 (ENSNSUG00000015705) #22	ENSNSUG00000015704 ##22	ENSNSUG00000015702 ##23	IDH3G (ENSNSUG00000015701)	SRPK3 (ENSNSUG00000015700)	ENSNSUG00000015699	ENSNSUG00000015698	ENSNSUG00000015697	ENSNSUG00000015696	BCAP31 (ENSNSUG00000015695)	ENSNSUG00000015694	ENSNSUG00000015693	PNCK (ENSNSUG00000015692)	DUSP9 (ENSNSUG00000015691)	CCNQ (ENSNSUG00000015690)	ATP2B3 (ENSNSUG00000015687)
Eastern brown snake	MODERN SPECIES	52	TSR2 (ENSPTXG00000007843)	FGD1 (ENSPTXG00000006759)	GNL3L (ENSPTXG00000006749)	HUWE1 (ENSPTXG00000006728)	ENSPTXG00000006712	ENSPTXG00000006711	FAM3A (ENSPTXG00000006710) #12	SLC10A3 (ENSPTXG00000006709) #13	UBL4A (ENSPTXG00000006707) #14	ENSPTXG00000006706 #9	PLXNA3 (ENSPTXG00000006595) #16	ENSPTXG00000006594 ##17	GDI1 (ENSPTXG00000006593) #18	ATP6AP1 (ENSPTXG00000006592) #19	TAFAZZIN (ENSPTXG00000006591) #20	DNASE1L1 (ENSPTXG00000006590) #22	ENSPTXG00000006589 ##22	ENSPTXG00000007999 ##23	IDH3G (ENSPTXG00000007998)	SRPK3 (ENSPTXG00000007997)	PLXNB3 (ENSPTXG00000005731)	ENSPTXG00000005713	ENSPTXG00000005712	BCAP31 (ENSPTXG00000005711)	ENSPTXG00000005710	PNCK (ENSPTXG00000005709)	DUSP9 (ENSPTXG00000005701)	CCNQ (ENSPTXG00000005700)	ATP2B3 (ENSPTXG00000005014)	BGN (ENSPTXG00000005013)	HAUS7 (ENSPTXG00000005012)
Lizard	MODERN SPECIES	1	ENSACAG00000045496	EXOSC8 (ENSACAG00000040511)	ALG5 (ENSACAG00000017663)	ENSACAG00000017673	ENSACAG00000028701	ENSACAG00000017686	VANGL1 (ENSACAG00000003153)	CASQ2 (ENSACAG00000003187)	ENSACAG00000003304	SLC22A15 (ENSACAG00000003327)	MAB21L3 (ENSACAG00000003399)	ENSACAG00000037716	ENSACAG00000007813	ENSACAG00000007823	ENSACAG00000007871	ENSACAG00000008098 #22	ENSACAG00000026130 ##22	ENSACAG00000008192 ##23	IDH3G (ENSACAG00000008220)	SRPK3 (ENSACAG00000008280)	PLXNB3 (ENSACAG00000008378)	ENSACAG00000029519	ABCD1 (ENSACAG00000008539)	BCAP31 (ENSACAG00000008629)	ENSACAG00000045378	ENSACAG00000008691	PNCK (ENSACAG00000008973)	ENSACAG00000044476	DUSP9 (ENSACAG00000009178)	CCNQ (ENSACAG00000009190)	ATP2B3 (ENSACAG00000009210)
Anura	ANCESTRAL SPECIES	277										ENSGT00950000182827.B	ENSGT01050000244850.A.a #16	ENSGT00390000004735.C ##17	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650 #19	ENSGT00390000018621 #20	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00950000182846.a.a.a.a.b ##22	ENSGT00390000003897 #23
Frog	MODERN SPECIES	8	arhgef3.1 (ENSXETG00000025462)	ENSXETG00000041659	rhoa.2 (ENSXETG00000009241)	uba1 (ENSXETG00000047879)	CCDC120 (ENSXETG00000043887)	tfe3 (ENSXETG00000047721)	gripap1 (ENSXETG00000048719)	kcnd1 (ENSXETG00000023771)	SLC35A2 (ENSXETG00000047186)	plxna3 (ENSXETG00000003370) #16	fam50a (ENSXETG00000003375) ##17	gdi1 (ENSXETG00000003376) #18	atp6ap1.2 (ENSXETG00000003377) #19	tafazzin (ENSXETG00000003378) #20	slc25a20l (ENSXETG00000049485)	DNASE1L1 (ENSXETG00000048321) #22	dnase1l1 (ENSXETG00000045715) ##22	rpl10 (ENSXETG00000010878) #23
Coelacanth	MODERN SPECIES	599			FAM3A (ENSLACG00000001901) #12	WNK3 (ENSLACG00000004553)	HUWE1 (ENSLACG00000010403)	ENSLACG00000012574	PHF8 (ENSLACG00000013043)	FAM120C (ENSLACG00000013899)	ENSLACG00000014374	acot22 (ENSLACG00000014780)	ENSLACG00000015069	HSD17B10 (ENSLACG00000015434)	ENSLACG00000015571	TAFAZZIN (ENSLACG00000015740) #20	ENSLACG00000015838	ENSLACG00000015955 #22
Actinopterygii	ANCESTRAL SPECIES	295							ENSGT00940000157503	ENSGT00940000154102.b	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182994.B.a.a.a #18	ENSGT00390000018621 #20	ENSGT00940000156650 #19	ENSGT00950000182846.a.a.a.a.b ##22	ENSGT00950000182846.a.a.a.a.a #22	ENSGT00390000003897 #23	ENSGT00940000153588.b #25	ENSGT00510000050141
Neopterygii	DUPLICATION
Neopterygii	ANCESTRAL SPECIES	244								ENSGT00950000182835.c.c	ENSGT00940000164454	ENSGT00940000162980	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000167069	ENSGT00390000018621 #20	ENSGT00940000156650 #19	ENSGT00950000182846.a.a.a.a.b ##22	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00390000003897 #23	ENSGT00940000153588.b #25	ENSGT00510000050141	ENSGT00940000155311.C	ENSGT00940000164248	ENSGT00940000153541.B
Spotted gar	MODERN SPECIES	647	ENSLOCG00000015442	loxl2b (ENSLOCG00000015445)	drd7 (ENSLOCG00000017983)	cyb561a3a (ENSLOCG00000015453)	ENSLOCG00000015455	ENSLOCG00000015457	ENSLOCG00000015458	tnfrsfa (ENSLOCG00000015460)	pfkfb1 (ENSLOCG00000015463)	ndnl2 (ENSLOCG00000015466)	ITIH6 (ENSLOCG00000015473)	gdi1 (ENSLOCG00000015477) #18	ENSLOCG00000015482	tafazzin (ENSLOCG00000015485) #20	atp6ap1a (ENSLOCG00000015488) #19	dnase1l1 (ENSLOCG00000015492) #22	dnase1l1l (ENSLOCG00000015497) ##22	rpl10 (ENSLOCG00000015500) #23	ENSLOCG00000015504	FLNA (ENSLOCG00000015505) #25	si:ch211-150o23.2 (ENSLOCG00000015513)	ENSLOCG00000017984	ENSLOCG00000015515	bgna (ENSLOCG00000015519)	si:dkey-6n6.1 (ENSLOCG00000015522)	tnnc1b (ENSLOCG00000015523)	ENSLOCG00000015526	ENSLOCG00000015527	ENSLOCG00000015529	dedd (ENSLOCG00000015531)	cfap126 (ENSLOCG00000015532)
Osteoglossocephalai	ANCESTRAL SPECIES	103	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00950000182835.c.c.g.a	ENSGT00940000164454	ENSGT00950000182835.c.c.g.b	ENSGT00940000162980	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000167069	ENSGT00390000018621 #20	ENSGT00940000156650.j #19	ENSGT00950000182846.a.a.a.a.b ##22	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00390000003897 #23	ENSGT00940000153588.b #25	ENSGT00510000050141	ENSGT00390000003937	ENSGT00940000165254.c.b	ENSGT00940000166720	ENSGT00390000008714.a	ENSGT00940000162660.a	ENSGT00940000155311.C.d	ENSGT00940000164248.b.a	ENSGT00940000153541.B	ENSGT00940000155445	ENSGT00390000001092	ENSGT00940000155311.C.c	ENSGT00940000164248.b.b
Osteoglossiformes	ANCESTRAL SPECIES	50	ENSGT00940000160145.b.db.a	ENSGT00530000063168.a.a.b	ENSGT00940000157847.n	ENSGT00940000156319.p	ENSGT00940000155170	ENSGT00600000085659.b	ENSGT00940000157506.f	ENSGT00940000155614	ENSGT00950000182835.c.c.g.a	ENSGT00940000164454	ENSGT00950000182994.B.a.a.a.a #18	ENSGT00940000167069	ENSGT00390000018621 #20	ENSGT00940000156650.i #19	ENSGT00940000154285.a.b.a.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00390000003897 #23	ENSGT00940000153588.b #25	ENSGT00510000050141	ENSGT00390000003937	ENSGT00940000165254.c.b.e	ENSGT00940000155445	ENSGT00390000001092	ENSGT00940000155311.C.c	ENSGT00940000164248.b.b	ENSGT00940000153541.B.e	ENSGT00940000161969.l	ENSGT00940000159748	ENSGT00940000160369	ENSGT00940000155545.a	ENSGT00940000161209
Asian bonytongue	MODERN SPECIES	14	phf8 (ENSSFOG00015012376)	ENSSFOG00015012347	HUWE1 (ENSSFOG00015012224)	hsd17b10 (ENSSFOG00015012190)	ENSSFOG00015030879	ENSSFOG00015012179	ENSSFOG00015011930	smc1a (ENSSFOG00015011818)	PFKFB1 (ENSSFOG00015011768)	ndnl2 (ENSSFOG00015011707)	gdi1 (ENSSFOG00015011655) #18	ENSSFOG00015011494	tafazzin (ENSSFOG00015011434) #20	ENSSFOG00015030719 #19	ENSSFOG00015011391	dnase1l1 (ENSSFOG00015030288) #22	rpl10 (ENSSFOG00015011227) #23	FLNA (ENSSFOG00015011152) #25	si:ch211-150o23.2 (ENSSFOG00015024460)	ENSSFOG00015011102	ENSSFOG00015011077	ENSSFOG00015010947	ccnq (ENSSFOG00015010865)	cfap126 (ENSSFOG00015010839)	bgnb (ENSSFOG00015010811)	ENSSFOG00015010789	tnnc1b (ENSSFOG00015010774)	tktb (ENSSFOG00015010745)	lrrc23 (ENSSFOG00015010734)	RBM10 (ENSSFOG00015010701)	rhoaa (ENSSFOG00015029789)
P. kingsleyae	MODERN SPECIES	32	ENSPKIG00000005495	ENSPKIG00000005506	ENSPKIG00000005522	FAM120C (ENSPKIG00000005546)	phf8 (ENSPKIG00000005617)	hsd17b10 (ENSPKIG00000005700)	ENSPKIG00000005746	smc1a (ENSPKIG00000005789)	PFKFB1 (ENSPKIG00000005925)	ndnl2 (ENSPKIG00000006015)	gdi1 (ENSPKIG00000006079) #18	ENSPKIG00000006172	tafazzin (ENSPKIG00000006241) #20	atp6ap1b (ENSPKIG00000006287) #19	ENSPKIG00000006308	dnase1l1 (ENSPKIG00000006336) #22	rpl10 (ENSPKIG00000006371) #23	FLNA (ENSPKIG00000006535) #25	ENSPKIG00000006890	ENSPKIG00000006922	ENSPKIG00000007010	ccnq (ENSPKIG00000007132)	cfap126 (ENSPKIG00000007159)	bgnb (ENSPKIG00000007187)	ENSPKIG00000007227	tktb (ENSPKIG00000007271)	lrrc23 (ENSPKIG00000007338)	RBM10 (ENSPKIG00000007372)	rhoac (ENSPKIG00000007429)	ENSPKIG00000007455	arhgef3l (ENSPKIG00000007479)
Clupeocephala	ANCESTRAL SPECIES	94	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00950000182835.c.c.g.a	ENSGT00940000164454	ENSGT00940000160207.b	ENSGT00940000155094.b	ENSGT00950000182835.c.c.g.b	ENSGT00940000162980	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650.i #19	ENSGT00940000167069	ENSGT00390000018621 #20	ENSGT00940000156650.j #19	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00390000003897 #23	ENSGT00940000153588.b #25	ENSGT00510000050141.b	ENSGT00940000158219.a	ENSGT00390000003937	ENSGT00940000155445	ENSGT00390000001092	ENSGT00940000158549	ENSGT00940000155311.C.c	ENSGT00940000164248.b.b	ENSGT00940000153541.B	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b
Euteleosteomorpha	ANCESTRAL SPECIES	341															ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000164502.a.a	ENSGT00940000156477.c	ENSGT00950000182872.f.a.a.a.a	ENSGT00940000159233
Protacanthopterygii	ANCESTRAL SPECIES	73	ENSGT00940000153541.C.a.a	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060	ENSGT00940000159085	ENSGT00390000003093	ENSGT00940000167423	ENSGT00950000183062.a.b.a	ENSGT00940000156473.e	ENSGT00940000157212.A	ENSGT00940000160979	ENSGT00940000159657.d.g.a	ENSGT01100000263518.B.b.a.a	ENSGT00940000157078.i.a	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000164502.a.a	ENSGT00940000156477.c	ENSGT00950000182872.f.a.a.a.a	ENSGT00940000159233
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	456									ENSGT00950000183062.a.b.a.e	ENSGT00940000156473.e.a	ENSGT00940000157212.A.a	ENSGT00940000159657.d.g.a.a	ENSGT01100000263518.B.b.a.a.a	ENSGT00940000157078.i.a.a.a	ENSGT00530000063759.b.b	ENSGT00950000182846.a.a.a.a.a.a.a #22	ENSGT00940000156478.g.b	ENSGT00940000161109.m.a	ENSGT00390000007823.q	ENSGT00940000159151.g.a	ENSGT00940000164502.a.a.c	ENSGT00940000156477.c	ENSGT00950000182872.f.a.a.a.a.e	ENSGT00940000160331.e.a	ENSGT00940000159233	ENSGT00390000018330.e.b	ENSGT00940000163461.b	ENSGT00390000013764.hb.a	ENSGT00390000013764.ib	ENSGT00940000153394.c.a.e	ENSGT00940000166296
Salmoninae_a	ANCESTRAL SPECIES	14	ENSGT00390000012981.a	ENSGT00940000153541.C.a.b.b.a	ENSGT00940000165924	ENSGT00940000167093.e	ENSGT00940000156060.dc.a	ENSGT00940000159085.g	ENSGT00390000003093	ENSGT00940000167423.a	ENSGT00950000183062.a.b.a.e	ENSGT00940000156473.e.a	ENSGT00940000157212.A.a	ENSGT00940000159657.d.g.a.a	ENSGT01100000263518.B.b.a.a.a	ENSGT00940000157078.i.a.a.a	ENSGT00530000063759.b.b	ENSGT00950000182846.a.a.a.a.a.a.a #22	ENSGT00940000156478.g.b	ENSGT00940000161109.m.a	ENSGT00390000007823.q	ENSGT00940000159151.g.a	ENSGT00940000164502.a.a.c	ENSGT00940000156477.c	ENSGT00950000182872.f.a.a.a.a.e.b	ENSGT00940000160331.e.a	ENSGT00940000159233	ENSGT00390000018330.e.b	ENSGT00940000163461.b	ENSGT00390000013764.hb.a	ENSGT00390000013764.ib.b	ENSGT00940000153394.c.a.e	ENSGT00940000166296
Oncorhynchus	ANCESTRAL SPECIES	20	ENSGT00390000012981.a	ENSGT00940000153541.C.a.b.b.a	ENSGT00940000165924	ENSGT00940000167093.e	ENSGT00940000156060.dc.a	ENSGT00940000159085.g	ENSGT00390000003093	ENSGT00940000167423.a	ENSGT00950000183062.a.b.a.e	ENSGT00940000156473.e.a	ENSGT00940000157212.A.a	ENSGT00940000159657.d.g.a.a	ENSGT01100000263518.B.b.a.a.a	ENSGT00940000157078.i.a.a.a	ENSGT00530000063759.b.b	ENSGT00950000182846.a.a.a.a.a.a.a #22	ENSGT00940000156478.g.b	ENSGT00940000161109.m.a	ENSGT00390000007823.q	ENSGT00940000159151.g.a	ENSGT00940000164502.a.a.c	ENSGT00940000156477.c	ENSGT00950000182872.f.a.a.a.a.e.b	ENSGT00940000160331.e.a	ENSGT00940000159233	ENSGT00390000018330.e.b	ENSGT00940000163461.b	ENSGT00390000013764.hb.a	ENSGT00390000013764.ib.b	ENSGT00940000153394.c.a.e	ENSGT00940000166296
Rainbow trout	MODERN SPECIES	30	ENSOMYG00000014316	lamb2 (ENSOMYG00000014735)	ENSOMYG00000019987	ENSOMYG00000020237	ENSOMYG00000020243	ENSOMYG00000068859	ENSOMYG00000051710	ENSOMYG00000020248	ENSOMYG00000020257	ENSOMYG00000053330	ENSOMYG00000020284	ENSOMYG00000020307	ENSOMYG00000020318	ENSOMYG00000020490	ENSOMYG00000021767	ENSOMYG00000021775 #22	ENSOMYG00000021910	ENSOMYG00000001500	mrgbp (ENSOMYG00000001521)	sulf2b (ENSOMYG00000002739)	ENSOMYG00000075085	ENSOMYG00000003762	ENSOMYG00000052872	phf20b (ENSOMYG00000003800)	ndrg3b (ENSOMYG00000004500)	sla2b (ENSOMYG00000005092)	EDEM2 (ENSOMYG00000005232)	ENSOMYG00000005373	ENSOMYG00000063373	ENSOMYG00000006293	GSS (ENSOMYG00000007029)
Oncorhynchus_a	ANCESTRAL SPECIES	7	ENSGT00390000012981.a	ENSGT00940000153541.C.a.b.b.a	ENSGT00940000165924	ENSGT00940000167093.e	ENSGT00940000156060.dc.a	ENSGT00940000159085.g	ENSGT00390000003093	ENSGT00940000167423.a	ENSGT00950000183062.a.b.a.e	ENSGT00940000156473.e.a	ENSGT00940000157212.A.a	ENSGT00940000159657.d.g.a.a	ENSGT01100000263518.B.b.a.a.a	ENSGT00940000157078.i.a.a.a	ENSGT00530000063759.b.b	ENSGT00950000182846.a.a.a.a.a.a.a #22	ENSGT00940000156478.g.b	ENSGT00940000161109.m.a	ENSGT00390000007823.q	ENSGT00940000159151.g.a	ENSGT00940000164502.a.a.c	ENSGT00940000156477.c	ENSGT00950000182872.f.a.a.a.a.e.b	ENSGT00940000160331.e.a	ENSGT00940000159233	ENSGT00390000018330.e.b	ENSGT00940000163461.b	ENSGT00390000013764.hb.a	ENSGT00390000013764.ib.b	ENSGT00940000153394.c.a.e	ENSGT00940000166296
Coho salmon	MODERN SPECIES	8	tnnc2.2 (ENSOKIG00005032957)	ENSOKIG00005032982	ENSOKIG00005033026	lamb2 (ENSOKIG00005033497)	USP19 (ENSOKIG00005034041)	ENSOKIG00005034559	ENSOKIG00005004284	ENSOKIG00005004306	ENSOKIG00005004319	ENSOKIG00005004371	arl8a (ENSOKIG00005004495)	GPR37L1 (ENSOKIG00005004534)	itpr3 (ENSOKIG00005004615)	ENSOKIG00005004780	SNX21 (ENSOKIG00005004785)	ENSOKIG00005004801 #22	hm13 (ENSOKIG00005004871)	ID1 (ENSOKIG00005005077)	mrgbp (ENSOKIG00005005094)	sulf2b (ENSOKIG00005005167)	ENSOKIG00005005334	phf20b (ENSOKIG00005005346)	ndrg3b (ENSOKIG00005005393)	edem2 (ENSOKIG00005005537)	ENSOKIG00005005615	ENSOKIG00005005636	gss (ENSOKIG00005005675)	ENSOKIG00005005733	pim1 (ENSOKIG00005005744)	ENSOKIG00005005765	ENSOKIG00005005785
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	37										ENSOTSG00005045903	ENSOTSG00005045897	arl8a (ENSOTSG00005045894)	GPR37L1 (ENSOTSG00005045892)	itpr3 (ENSOTSG00005045843)	snx21 (ENSOTSG00005045839)	dnase1l1 (ENSOTSG00005045838) #22	hm13 (ENSOTSG00005045803)	ENSOTSG00005045799	ID1 (ENSOTSG00005045798)	mrgbp (ENSOTSG00005045797)	sulf2b (ENSOTSG00005045616)	ENSOTSG00005045595	phf20b (ENSOTSG00005045593)	ndrg3b (ENSOTSG00005045590)	sla2b (ENSOTSG00005045587)	edem2 (ENSOTSG00005045583)	ENSOTSG00005045582	ENSOTSG00005045579	gss (ENSOTSG00005045513)	pim1 (ENSOTSG00005045512)	ENSOTSG00005045511
Chinook salmon	MODERN SPECIES	2887									ENSOTSG00005022869	ENSOTSG00005022870	arl8a (ENSOTSG00005022871)	GPR37L1 (ENSOTSG00005022872)	ENSOTSG00005022873	itpr3 (ENSOTSG00005022874)	snx21 (ENSOTSG00005022885)	dnase1l1 (ENSOTSG00005022886) #22	hm13 (ENSOTSG00005022890)	ENSOTSG00005022926
Salmo	ANCESTRAL SPECIES	16	ENSGT00390000012981.a	ENSGT00940000153541.C.a.b.b.a	ENSGT00940000165924	ENSGT00940000167093.e	ENSGT00940000156060.dc.a	ENSGT00940000159085.g	ENSGT00390000003093.f	ENSGT00940000167423.a	ENSGT00950000183062.a.b.a.e	ENSGT00940000156473.e.a	ENSGT00940000157212.A.a	ENSGT00940000159657.d.g.a.a	ENSGT01100000263518.B.b.a.a.a	ENSGT00940000157078.i.a.a.a	ENSGT00530000063759.b.b	ENSGT00950000182846.a.a.a.a.a.a.a #22	ENSGT00940000156478.g.b	ENSGT00940000161109.m.a	ENSGT00390000007823.q	ENSGT00940000159151.g.a	ENSGT00940000164502.a.a.c	ENSGT00940000156477.c	ENSGT00950000182872.f.a.a.a.a.e.b	ENSGT00940000160331.e.a	ENSGT00940000159233	ENSGT00390000018330.e.b	ENSGT00940000163461.b	ENSGT00390000013764.hb.a	ENSGT00390000013764.ib.b	ENSGT00940000153394.c.a.e	ENSGT00940000166296
Atlantic salmon	MODERN SPECIES	6	ENSSSAG00000008159	taf13 (ENSSSAG00000089038)	tnnc2.2 (ENSSSAG00000008497)	ENSSSAG00000008508	ENSSSAG00000119899	lamb2 (ENSSSAG00000040820)	ENSSSAG00000046116	ENSSSAG00000103914	ENSSSAG00000114505	ENSSSAG00000052808	ENSSSAG00000052811	ENSSSAG00000052841	etbr2 (ENSSSAG00000052849)	ENSSSAG00000053074	ENSSSAG00000109613	ENSSSAG00000057872 #22	ENSSSAG00000082099	HM13 (ENSSSAG00000057928)	ID1 (ENSSSAG00000058127)	mrgbp (ENSSSAG00000058155)	ENSSSAG00000082809	sulf2b (ENSSSAG00000058279)	ENSSSAG00000061265	phf20b (ENSSSAG00000061290)	ndrg3b (ENSSSAG00000114495)	EDEM2 (ENSSSAG00000065314)	ENSSSAG00000065339	ENSSSAG00000065536	GSS (ENSSSAG00000066407)	GSS (ENSSSAG00000066455)	pim1 (ENSSSAG00000066472)
River trout	MODERN SPECIES	20	tnnc2.2 (ENSSTUG00000049424)	ENSSTUG00000049422	ENSSTUG00000049398	lamb2 (ENSSTUG00000049320)	USP19 (ENSSTUG00000048596)	ENSSTUG00000048505	ENSSTUG00000048495	ENSSTUG00000048483	ENSSTUG00000048475	ENSSTUG00000048449	arl8a (ENSSTUG00000048436)	GPR37L1 (ENSSTUG00000048427)	itpr3 (ENSSTUG00000048401)	snx21 (ENSSTUG00000048390)	ENSSTUG00000048382	dnase1l1 (ENSSTUG00000048370) #22	hm13 (ENSSTUG00000048234)	ID1 (ENSSTUG00000048217)	mrgbp (ENSSTUG00000048212)	sulf2b (ENSSTUG00000047883)	ENSSTUG00000047819	phf20b (ENSSTUG00000047775)	ndrg3b (ENSSTUG00000047557)	sla2b (ENSSTUG00000047525)	edem2 (ENSSTUG00000047498)	trpc4apb (ENSSTUG00000047136)	ENSSTUG00000047037	gss (ENSSTUG00000046984)	GSS (ENSSTUG00000046981)	pim1 (ENSSTUG00000046972)	ENSSTUG00000046971
Huchen	MODERN SPECIES	899									ENSHHUG00000008329	ENSHHUG00000008345	ENSHHUG00000008346	arl8a (ENSHHUG00000008354)	GPR37L1 (ENSHHUG00000008409)	itpr3 (ENSHHUG00000008419)	snx21 (ENSHHUG00000008832)	dnase1l1 (ENSHHUG00000008850) #22	hm13 (ENSHHUG00000008934)	ID1 (ENSHHUG00000009034)	mrgbp (ENSHHUG00000009062)	ENSHHUG00000009069	ENSHHUG00000009077
Salmoninae	ANCESTRAL SPECIES	765											ENSGT00940000160979	ENSGT00940000159657.d.g.a.b	ENSGT01100000263518.B.b.a.a.b	ENSGT00940000157078.i.a.a.b	ENSGT00530000063759.b.a	ENSGT00950000182846.a.a.a.a.a.a.b #22	ENSGT00940000156478.g.a	ENSGT00940000159151.g.b	ENSGT00390000007823.r	ENSGT00940000161109.m.b
Salmoninae_a	ANCESTRAL SPECIES	26	ENSGT00390000012981.b	ENSGT00940000153541.C.a.b.b.b	ENSGT00940000153541.C.a.a	ENSGT00940000167093.f	ENSGT00940000156060.dc.b	ENSGT00940000159085.h	ENSGT00940000167423.b	ENSGT00950000183062.a.b.a.f	ENSGT00940000156473.e.b	ENSGT00940000157212.A.b	ENSGT00940000160979	ENSGT00940000159657.d.g.a.b	ENSGT01100000263518.B.b.a.a.b	ENSGT00940000157078.i.a.a.b	ENSGT00530000063759.b.a	ENSGT00950000182846.a.a.a.a.a.a.b #22	ENSGT00940000156478.g.a	ENSGT00940000161109.m.b	ENSGT00390000007823.r	ENSGT00940000159151.g.b	ENSGT00940000164502.a.a.d	ENSGT00950000182872.f.a.a.a.a.f	ENSGT00940000160331.e.b	ENSGT00390000018330.e.a	ENSGT00390000013764.hb.b	ENSGT00940000153394.c.a.f	ENSGT00950000183145.A.b.b	ENSGT00940000155472.a.a.d	ENSGT00720000108868.f	ENSGT00940000164289.a.c	ENSGT01050000244850.A.a.o.a.f #16
Oncorhynchus	ANCESTRAL SPECIES	7	ENSGT00530000063631.b.n.b.b	ENSGT00940000153481.B.f.b	ENSGT00390000012981.b	ENSGT00940000153541.C.a.b.b.b	ENSGT00940000153541.C.a.a	ENSGT00940000156060.dc.b	ENSGT00940000159085.h	ENSGT00940000167423.b	ENSGT00950000183062.a.b.a.f	ENSGT00940000156473.e.b	ENSGT00940000157212.A.b	ENSGT00940000159657.d.g.a.b	ENSGT01100000263518.B.b.a.a.b	ENSGT00940000157078.i.a.a.b	ENSGT00530000063759.b.a	ENSGT00950000182846.a.a.a.a.a.a.b #22	ENSGT00940000156478.g.a	ENSGT00940000161109.m.b	ENSGT00390000007823.r	ENSGT00940000159151.g.b	ENSGT00940000164502.a.a.d	ENSGT00950000182872.f.a.a.a.a.f	ENSGT00940000160331.e.b	ENSGT00390000018330.e.a	ENSGT00940000153394.c.a.f	ENSGT00950000183145.A.b.b	ENSGT00940000155472.a.a.d	ENSGT00720000108868.f	ENSGT00940000164289.a.c	ENSGT01050000244850.A.a.o.a.f #16	ENSGT00940000155869
Oncorhynchus_a	ANCESTRAL SPECIES	9	ENSGT00940000158950.n	ENSGT00950000183211.a.a.a.gb	ENSGT00530000063631.b.n.b.b	ENSGT00940000153481.B.f.b	ENSGT00390000012981.b	ENSGT00940000153541.C.a.b.a	ENSGT00940000156060.dc.b	ENSGT00940000159085.h	ENSGT00940000167423.b	ENSGT00940000156473.e.b	ENSGT00940000157212.A.b	ENSGT00940000159657.d.g.a.b	ENSGT01100000263518.B.b.a.a.b	ENSGT00940000157078.i.a.a.b	ENSGT00530000063759.b.a	ENSGT00950000182846.a.a.a.a.a.a.b #22	ENSGT00940000156478.h	ENSGT00940000156478.g.a	ENSGT00940000161109.m.b	ENSGT00390000007823.r	ENSGT00940000159151.g.b	ENSGT00940000164502.a.a.d	ENSGT00950000182872.f.a.a.a.a.f	ENSGT00940000160331.e.b	ENSGT00390000018330.e.a	ENSGT00940000153394.c.a.f	ENSGT00950000183145.A.b.b	ENSGT00940000155472.a.a.d	ENSGT00720000108868.f	ENSGT00940000164289.a.c	ENSGT01050000244850.A.a.o.a.f #16
Chinook salmon	MODERN SPECIES	14	ENSOTSG00005013440 ##25	tpd52l2b (ENSOTSG00005013438)	ENSOTSG00005013434	EMC1 (ENSOTSG00005013433)	ENSOTSG00005013431	RERE (ENSOTSG00005013429)	ENSOTSG00005013428	ENSOTSG00005013427	ENSOTSG00005013426	ENSOTSG00005013425	ENSOTSG00005013423	arl8a (ENSOTSG00005013422)	GPR37L1 (ENSOTSG00005013421)	ENSOTSG00005013419	snx21 (ENSOTSG00005013413)	dnase1l1 (ENSOTSG00005013411) #22	hm13 (ENSOTSG00005013410)	ENSOTSG00005013408	ENSOTSG00005013406	sulf2b (ENSOTSG00005013404)	ENSOTSG00005013402	grk5 (ENSOTSG00005012177)	ash2l (ENSOTSG00005010479)	pnx (ENSOTSG00005010469)	ENSOTSG00005010468	atp6ap1a (ENSOTSG00005010467) #19	hsd17b10 (ENSOTSG00005010466)	ndnl2 (ENSOTSG00005010465)	ENSOTSG00005010464	slc16a1b (ENSOTSG00005010460)	ENSOTSG00005010459
Coho salmon	MODERN SPECIES	16	ENSOKIG00005034124	pard6b (ENSOKIG00005034116)	adnpb (ENSOKIG00005034111)	dpm1 (ENSOKIG00005034086)	taf13 (ENSOKIG00005034073)	tnnc2.2 (ENSOKIG00005034007)	LAMB2 (ENSOKIG00005029579)	USP19 (ENSOKIG00005028818)	ENSOKIG00005028768	ENSOKIG00005028757	ENSOKIG00005028685	ARL8A (ENSOKIG00005028646)	GPR37L1 (ENSOKIG00005028619)	ITPR3 (ENSOKIG00005028438)	snx21 (ENSOKIG00005028406)	dnase1l1 (ENSOKIG00005028367) #22	HM13 (ENSOKIG00005028129)	ID1 (ENSOKIG00005028096)	mrgbp (ENSOKIG00005028064)	ENSOKIG00005028046	sulf2b (ENSOKIG00005024715)	ENSOKIG00005024539	ndrg3b (ENSOKIG00005024382)	sla2b (ENSOKIG00005024361)	TRPC4AP (ENSOKIG00005023143)	pim1 (ENSOKIG00005023060)	ENSOKIG00005023012	gripap1 (ENSOKIG00005022809)	ptpn18 (ENSOKIG00005022692)	plxna3 (ENSOKIG00005019794) #16	slc6a8 (ENSOKIG00005019356)
Rainbow trout	MODERN SPECIES	7	ENSOMYG00000077363	ENSOMYG00000077195	ENSOMYG00000068341	ENSOMYG00000059694	ENSOMYG00000028194	ENSOMYG00000042292	ENSOMYG00000041899	ENSOMYG00000041874	ENSOMYG00000041872	ENSOMYG00000074430	ENSOMYG00000050917	ENSOMYG00000041867	ENSOMYG00000069629	ENSOMYG00000041859	ENSOMYG00000041850	ENSOMYG00000041818 #22	ENSOMYG00000059041	id1 (ENSOMYG00000041786)	mrgbp (ENSOMYG00000041780)	sulf2b (ENSOMYG00000040949)	ENSOMYG00000040882	ENSOMYG00000074130	ndrg3b (ENSOMYG00000040817)	ENSOMYG00000040626	pim1 (ENSOMYG00000040587)	ENSOMYG00000040580	ENSOMYG00000040568	kcnd1 (ENSOMYG00000040558)	gripap1 (ENSOMYG00000040496)	ptpn18 (ENSOMYG00000040450)	plxna3 (ENSOMYG00000040043) #16
Huchen	MODERN SPECIES	5406														itpr3 (ENSHHUG00000003205)	snx21 (ENSHHUG00000003193)	dnase1l1 (ENSHHUG00000003107) #22	hm13 (ENSHHUG00000002881)
Northern pike	MODERN SPECIES	11	tnnc2.2 (ENSELUG00000025720)	TNNC2 (ENSELUG00000010354)	ENSELUG00000010385	ENSELUG00000026575	ENSELUG00000010529	USP19 (ENSELUG00000010595)	ENSELUG00000010607	ENSELUG00000010627	ENSELUG00000010641	ENSELUG00000010655	ENSELUG00000010681	arl8a (ENSELUG00000010736)	GPR37L1 (ENSELUG00000010756)	itpr3 (ENSELUG00000010872)	snx21 (ENSELUG00000010899)	dnase1l1 (ENSELUG00000010920) #22	hm13 (ENSELUG00000011006)	ID1 (ENSELUG00000011039)	mrgbp (ENSELUG00000011074)	sulf2b (ENSELUG00000011218)	ENSELUG00000011275	ENSELUG00000033112	ndrg3b (ENSELUG00000001260)	sla2b (ENSELUG00000011530)	edem2 (ENSELUG00000011569)	trpc4apb (ENSELUG00000011638)	ENSELUG00000011755	gss (ENSELUG00000011816)	pim1 (ENSELUG00000011885)	ENSELUG00000011953	ENSELUG00000011978
Acanthomorphata	ANCESTRAL SPECIES	177						ENSGT00990000204332	ENSGT00940000159667.a	ENSGT00390000005780.a	ENSGT00940000160485	ENSGT00550000075050	ENSGT00950000182872.f.a.a.a.a	ENSGT00940000156477.d.b	ENSGT00940000159233	ENSGT00940000163908	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT00940000164481.b.b	ENSGT00940000155472.a.a	ENSGT00720000108868	ENSGT00940000164289.a	ENSGT01050000244850.A.a.o.a #16	ENSGT00390000011863.c	ENSGT00940000155869
Euacanthomorphacea	ANCESTRAL SPECIES	61						ENSGT00990000204332	ENSGT00940000159667.a	ENSGT00390000005780.a	ENSGT00940000160485	ENSGT00550000075050	ENSGT00950000182872.f.a.a.a.a	ENSGT00940000156477.d.b	ENSGT00940000159233	ENSGT00940000163908	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT00940000164481.b.b	ENSGT00940000155472.a.a	ENSGT00720000108868	ENSGT00940000164289.a	ENSGT01050000244850.A.a.o.a #16	ENSGT00390000011863.c	ENSGT00940000155869
Percomorphaceae	ANCESTRAL SPECIES	36	ENSGT00940000167069	ENSGT00940000164454	ENSGT00950000182835.c.c.g.a	ENSGT00940000157506.f	ENSGT01100000265223	ENSGT00940000159667.a	ENSGT00390000005780.a	ENSGT00940000160485	ENSGT00550000075050	ENSGT00950000182872.f.a.a.a.a	ENSGT00940000156477.d.b	ENSGT00940000166641	ENSGT00940000159233	ENSGT00940000163908	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT00940000164481.b.b	ENSGT00940000155472.a.a	ENSGT00720000108868	ENSGT00940000164289.a	ENSGT01050000244850.A.a.o.a #16	ENSGT00390000011863.c	ENSGT00940000155869
Percomorphaceae_B	ANCESTRAL SPECIES	6	ENSGT00940000159667.a	ENSGT00390000005780.a	ENSGT00940000160485	ENSGT00550000075050	ENSGT00950000182872.f.a.a.a.a	ENSGT00940000156477.d.b	ENSGT00940000166641	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.a.a	ENSGT00940000163911.a.a.b.a.a.b.a.b	ENSGT00950000183062.a.b.b.b	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.b.b	ENSGT00940000159233	ENSGT00940000163908	ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT00940000164481.b.b	ENSGT00940000155472.a.a	ENSGT00720000108868	ENSGT00940000164289.a	ENSGT01050000244850.A.a.o.a #16	ENSGT00390000011863.c	ENSGT00940000155869
Percomorphaceae_C	ANCESTRAL SPECIES	4	ENSGT00940000159667.a	ENSGT00390000005780.a	ENSGT00940000160485	ENSGT00550000075050	ENSGT00950000182872.f.a.a.a.a.b	ENSGT00940000156477.d.b	ENSGT00940000166641	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.b.b	ENSGT01090000260218.b	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.a.a	ENSGT00940000163911.a.a.b.a.a.b.a.b	ENSGT00940000159233	ENSGT00940000163908	ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT00940000164481.b.b	ENSGT00940000155472.a.a	ENSGT00720000108868	ENSGT00940000164289.a	ENSGT01050000244850.A.a.o.a #16	ENSGT00390000011863.c	ENSGT00940000155869
Percomorphaceae_D	ANCESTRAL SPECIES	4	ENSGT00950000183062.a.b.b.b	ENSGT00940000159667.a	ENSGT00390000005780.a	ENSGT00940000160485	ENSGT00550000075050	ENSGT00950000182872.f.a.a.a.a.b	ENSGT00940000156477.d.b	ENSGT00950000182872.f.a.a.a.a.a.b	ENSGT00940000166641	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.b.b	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.a.a	ENSGT00940000159233	ENSGT00940000163908	ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT00940000164481.b.b	ENSGT00940000155472.a.a	ENSGT00720000108868	ENSGT00940000164289.a	ENSGT01050000244850.A.a.o.a #16	ENSGT00390000011863.c	ENSGT00940000155869
Carangaria	ANCESTRAL SPECIES	2	ENSGT00940000157506.f	ENSGT00950000183062.a.b.b.b	ENSGT00940000159667.a	ENSGT00390000005780.a	ENSGT00940000160485	ENSGT00550000075050	ENSGT00950000182872.f.a.a.a.a.b	ENSGT00940000156477.d.b	ENSGT00940000166641	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.b.b	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.a.a	ENSGT00940000159233	ENSGT00940000163908	ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT00940000164481.b.b	ENSGT00940000155472.a.a	ENSGT00720000108868	ENSGT00940000164289.a	ENSGT01050000244850.A.a.o.a #16	ENSGT00390000011863.c	ENSGT00940000155869
Carangaria_A	ANCESTRAL SPECIES	1	ENSGT00940000157506.f	ENSGT00950000183062.a.b.b.b	ENSGT00940000159667.a	ENSGT00390000005780.a	ENSGT00940000160485	ENSGT00550000075050	ENSGT00950000182872.f.a.a.a.a.b	ENSGT00940000156477.d.b	ENSGT00940000166641	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.b.b	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.a.a	ENSGT00940000159233	ENSGT00940000163908	ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT00940000164481.b.b	ENSGT00940000155472.a.a	ENSGT00720000108868	ENSGT00940000164289.a	ENSGT01050000244850.A.a.o.a #16	ENSGT00390000011863.c	ENSGT00940000155869
Barramundi perch	MODERN SPECIES	578				ENSLCAG00010027313	ENSLCAG00010027314	ENSLCAG00010027315	ENSLCAG00010027316	ENSLCAG00010027317	ENSLCAG00010027318	ENSLCAG00010027319	ENSLCAG00010027320	edem2 (ENSLCAG00010027322)	ENSLCAG00010027326	ENSLCAG00010027327	snx21 (ENSLCAG00010027329)	dnase1l1 (ENSLCAG00010027330) #22	hm13 (ENSLCAG00010027332)	mrgbp (ENSLCAG00010027336)
Seriola	ANCESTRAL SPECIES	75	ENSGT00950000182835.c.c.g.a	ENSGT00940000157506.f	ENSGT00950000183062.a.b.b.b	ENSGT00940000159667.a	ENSGT00390000005780.a	ENSGT00940000160485	ENSGT00550000075050	ENSGT00950000182872.f.a.a.a.a.b	ENSGT00940000156477.d.b	ENSGT00940000166641	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.b.b	ENSGT00940000159233	ENSGT00940000163908	ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT00940000164481.b.b	ENSGT00940000155472.a.a	ENSGT00720000108868	ENSGT00940000164289.a	ENSGT01050000244850.A.a.o.a #16	ENSGT00390000011863.c	ENSGT00940000155869
Greater amberjack	MODERN SPECIES	212	ndnl2 (ENSSDUG00000023225)	ENSSDUG00000023209	ENSSDUG00000023128	PDZD4 (ENSSDUG00000023108)	IQSEC2 (ENSSDUG00000023103)	zgc:86609 (ENSSDUG00000023092)	USP11 (ENSSDUG00000023075)	rfc2 (ENSSDUG00000023066)	ENSSDUG00000023047	ENSSDUG00000023042	ENSSDUG00000023027	ENSSDUG00000023020	edem2 (ENSSDUG00000023010)	ENSSDUG00000023003	snx21 (ENSSDUG00000022997)	dnase1l1 (ENSSDUG00000022989) #22	hm13 (ENSSDUG00000022969)	mrgbp (ENSSDUG00000022964)	SULF2 (ENSSDUG00000022931)	ENSSDUG00000022911
Yellowtail amberjack	MODERN SPECIES	3205	ENSSLDG00000009016	ENSSLDG00000009749	IQSEC2 (ENSSLDG00000009866)	zgc:86609 (ENSSLDG00000010230)	USP11 (ENSSLDG00000010274)	rfc2 (ENSSLDG00000010335)	ENSSLDG00000010367	ENSSLDG00000010405	ENSSLDG00000010437	ENSSLDG00000010485	ENSSLDG00000010499	edem2 (ENSSLDG00000010538)	ENSSLDG00000010603	ENSSLDG00000010629	snx21 (ENSSLDG00000010645)	ENSSLDG00000010666 #22	hm13 (ENSSLDG00000010714)	mrgbp (ENSSLDG00000010798)	SULF2 (ENSSLDG00000010832)	ENSSLDG00000010917	itpr3 (ENSSLDG00000011055)	GPR37L1 (ENSSLDG00000011204)	arl8a (ENSSLDG00000011226)	ENSSLDG00000011273	ENSSLDG00000011330	st14b (ENSSLDG00000011378)	kcnd1 (ENSSLDG00000011558)	gripap1 (ENSSLDG00000011599)	ptpn18 (ENSSLDG00000011668)	plxna3 (ENSSLDG00000011734) #16	bcap31 (ENSSLDG00000011822)
Pleuronectoidei	ANCESTRAL SPECIES	24	ENSGT00390000018621 #20	ENSGT00940000164454	ENSGT00950000182835.c.c.g.a	ENSGT00940000157506.f	ENSGT00950000183062.a.b.b.b	ENSGT00940000159667.a	ENSGT00390000005780.a	ENSGT00940000160485	ENSGT00550000075050	ENSGT00950000182872.f.a.a.a.a.b	ENSGT00940000156477.d.b	ENSGT00940000166641	ENSGT00940000159233	ENSGT00940000163908	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT00940000164481.b.b	ENSGT00940000155472.a.a	ENSGT00720000108868	ENSGT00940000164289.a	ENSGT01050000244850.A.a.o.a #16	ENSGT00390000011863.c	ENSGT00940000155869
Turbot	MODERN SPECIES	2	ENSSMAG00000016508 #20	ENSSMAG00000016501	ENSSMAG00000016455	ENSSMAG00000016313	ENSSMAG00000016272	ENSSMAG00000016230	ENSSMAG00000031445	ENSSMAG00000016080	ENSSMAG00000016038	ENSSMAG00000015968	ENSSMAG00000032540	ENSSMAG00000015905	ENSSMAG00000015895	ENSSMAG00000015874	ENSSMAG00000015854	ENSSMAG00000015805 #22	ENSSMAG00000015756	ENSSMAG00000015723	ENSSMAG00000015550	ENSSMAG00000015330	ENSSMAG00000015214	ENSSMAG00000030204	ENSSMAG00000015087	ENSSMAG00000015062	ENSSMAG00000015050	kcnd1 (ENSSMAG00000015015)	gripap1 (ENSSMAG00000014832)	ptpn18 (ENSSMAG00000014799)	plxna3 (ENSSMAG00000014612) #16	ENSSMAG00000014595	ENSSMAG00000014523
Tongue sole	MODERN SPECIES	1	arhgef3l (ENSCSEG00000018397)	uba1 (ENSCSEG00000018402)	ngfa (ENSCSEG00000018434)	kcna2b (ENSCSEG00000018442)	slc17a9b (ENSCSEG00000018445)	bhlhe23 (ENSCSEG00000018451)	ZBTB46 (ENSCSEG00000018454)	ENSCSEG00000018474	uckl1a (ENSCSEG00000018479)	ENSCSEG00000018498	prpf6 (ENSCSEG00000018561)	ENSCSEG00000018578	arl8a (ENSCSEG00000018609)	GPR37L1 (ENSCSEG00000018674)	itpr3 (ENSCSEG00000018693)	ENSCSEG00000018733 #22	hm13 (ENSCSEG00000018745)	mrgbp (ENSCSEG00000018759)	SULF2 (ENSCSEG00000018790)	ENSCSEG00000018833	snx21 (ENSCSEG00000019050)	ENSCSEG00000019068	edem2 (ENSCSEG00000019072)	ENSCSEG00000019084	ENSCSEG00000019101	ENSCSEG00000019106	rfc2 (ENSCSEG00000019122)	USP11 (ENSCSEG00000019125)	wrap73 (ENSCSEG00000019140)	tp73 (ENSCSEG00000019152)	rer1 (ENSCSEG00000019161)
Anabantaria	ANCESTRAL SPECIES	3	ENSGT00940000155869	ENSGT00390000011863.c	ENSGT01050000244850.A.a.o.a #16	ENSGT00940000164289.a	ENSGT00720000108868	ENSGT00940000155472.a.a	ENSGT00940000164481.b.b	ENSGT00550000075050	ENSGT00950000182872.f.a.a.a.a.b	ENSGT00940000156477.d.b	ENSGT00940000166641	ENSGT00940000159233	ENSGT00940000163908	ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT00940000160485	ENSGT00390000005780.a	ENSGT00940000159667.a	ENSGT00950000183062.a.b.b.b	ENSGT00940000154285.a.a.c.b.b.a.a	ENSGT00950000183083.b	ENSGT00390000002421.a
Anabantoidei	ANCESTRAL SPECIES	2	ENSGT00940000155869	ENSGT00390000011863.c	ENSGT01050000244850.A.a.o.a #16	ENSGT00940000164289.a	ENSGT00720000108868	ENSGT00940000155472.a.a	ENSGT00940000164481.b.b	ENSGT00550000075050	ENSGT00950000182872.f.a.a.a.a.b	ENSGT00940000156477.d.b	ENSGT00940000166641	ENSGT00940000159233	ENSGT00940000163908	ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT00940000160485	ENSGT00390000005780.a	ENSGT00940000159667.a	ENSGT00950000183062.a.b.b.b	ENSGT00940000154285.a.a.c.b.b.a.a	ENSGT00950000183083.b	ENSGT00390000002421.a
Climbing perch	MODERN SPECIES	20	ptpn18 (ENSATEG00000028292)	gripap1 (ENSATEG00000020553)	kcnd1 (ENSATEG00000020662)	ENSATEG00000020690	ENSATEG00000020714	ENSATEG00000028896	ENSATEG00000020771	ENSATEG00000020788	ENSATEG00000020831	ENSATEG00000020873	ENSATEG00000020891	ENSATEG00000026675	ENSATEG00000026468	ENSATEG00000028919	ENSATEG00000025613	ENSATEG00000020987 #22	ENSATEG00000021014	ENSATEG00000021066	ENSATEG00000021121	ENSATEG00000021190	ENSATEG00000021275	ENSATEG00000021350	ENSATEG00000030011	ENSATEG00000026646	ENSATEG00000026591	ENSATEG00000021423	ENSATEG00000021432	ENSATEG00000021442	ENSATEG00000021459	ENSATEG00000027773	ENSATEG00000021503
Siamese fighting fish	MODERN SPECIES	18	plxna3 (ENSBSLG00000019433) #16	ENSBSLG00000019635	ENSBSLG00000019642	gripap1 (ENSBSLG00000019653)	kcnd1 (ENSBSLG00000019897)	st14b (ENSBSLG00000019944)	ENSBSLG00000020295	ENSBSLG00000020319	ENSBSLG00000020355	ENSBSLG00000020363	ENSBSLG00000020366	edem2 (ENSBSLG00000020379)	ENSBSLG00000020401	ENSBSLG00000020408	snx21 (ENSBSLG00000020411)	dnase1l1 (ENSBSLG00000020413) #22	hm13 (ENSBSLG00000020426)	mrgbp (ENSBSLG00000020459)	SULF2 (ENSBSLG00000021128)	ENSBSLG00000021377	itpr3 (ENSBSLG00000021434)	ENSBSLG00000021605	ENSBSLG00000021608	GPR37L1 (ENSBSLG00000021609)	arl8a (ENSBSLG00000021623)	ENSBSLG00000021645	USP11 (ENSBSLG00000021656)	zgc:86609 (ENSBSLG00000021721)	IQSEC2 (ENSBSLG00000021807)	ENSBSLG00000021901	ENSBSLG00000021904
Zig-zag eel	MODERN SPECIES	21	gripap1 (ENSMAMG00000012610)	ENSMAMG00000027067	kcnd1 (ENSMAMG00000012654)	ENSMAMG00000012689	ENSMAMG00000024968	ENSMAMG00000012851	ENSMAMG00000026963	ENSMAMG00000024520	ENSMAMG00000012831	ENSMAMG00000012892	ENSMAMG00000025522	ENSMAMG00000013002	ENSMAMG00000025766	ENSMAMG00000013051	ENSMAMG00000027935	ENSMAMG00000013072 #22	ENSMAMG00000013094	ENSMAMG00000013152	ENSMAMG00000013185	ENSMAMG00000013351	ENSMAMG00000013477	ENSMAMG00000013615	ENSMAMG00000011338	ENSMAMG00000013640	ENSMAMG00000013662	ENSMAMG00000013702	ENSMAMG00000027727	ENSMAMG00000013835	ENSMAMG00000013919	ENSMAMG00000013967	ENSMAMG00000013996
Eupercaria	ANCESTRAL SPECIES	4	ENSGT00940000159667.a	ENSGT00390000005780.a	ENSGT00940000160485	ENSGT00550000075050	ENSGT00950000182872.f.a.a.a.a.b	ENSGT00940000156477.d.b	ENSGT00940000166641	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.b.b	ENSGT01090000260218.b	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.a.a	ENSGT00940000163911.a.a.b.a.a.b.a.b	ENSGT00940000159233	ENSGT00940000163908	ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT00940000164481.b.b	ENSGT00940000155472.a.a	ENSGT00720000108868	ENSGT00940000164289.a	ENSGT01050000244850.A.a.o.a #16	ENSGT00390000011863.c	ENSGT00940000155869
Eupecaria_A	ANCESTRAL SPECIES	4	ENSGT00940000159667.a	ENSGT00390000005780.a	ENSGT00940000160485	ENSGT00550000075050	ENSGT00950000182872.f.a.a.a.a.b	ENSGT00940000156477.d.b	ENSGT00940000166641	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.b.b	ENSGT01090000260218.b	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.a.a	ENSGT00940000163911.a.a.b.a.a.b.a.b	ENSGT00940000159233	ENSGT00940000163908	ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT00940000164481.b.b	ENSGT00940000155472.a.a	ENSGT00720000108868	ENSGT00940000164289.a	ENSGT01050000244850.A.a.o.a #16	ENSGT00390000011863.c	ENSGT00940000155869
Eupecaria_B	ANCESTRAL SPECIES	5	ENSGT00940000159667.a	ENSGT00390000005780.a	ENSGT00940000160485	ENSGT00550000075050	ENSGT00950000182872.f.a.a.a.a.b	ENSGT00940000156477.d.b	ENSGT00940000166641	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.b.b	ENSGT01090000260218.b	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.a.a	ENSGT00940000163911.a.a.b.a.a.b.a.b	ENSGT00940000159233	ENSGT00940000163908	ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT00940000164481.b.b	ENSGT00940000155472.a.a	ENSGT00720000108868	ENSGT00940000164289.a	ENSGT01050000244850.A.a.o.a #16	ENSGT00390000011863.c	ENSGT00940000155869
Perciformes	ANCESTRAL SPECIES	37												ENSGT00940000159233	ENSGT00940000163908	ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.a.a	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT00940000164481.b.b	ENSGT00940000155472.a.a	ENSGT00720000108868	ENSGT01100000264948	ENSGT00940000164289.a	ENSGT01050000244850.A.a.o.a #16
Cottioidei	ANCESTRAL SPECIES	47		ENSGT00940000164454	ENSGT00950000182835.c.c.g.a	ENSGT00940000157506.f	ENSGT00940000159667.a	ENSGT00390000005780.a	ENSGT00940000160485	ENSGT00550000075050	ENSGT00950000182872.f.a.a.a.a.b	ENSGT00940000156477.d.b	ENSGT00940000166641	ENSGT00940000159233	ENSGT00940000163908	ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT00940000157078	ENSGT01100000264948	ENSGT00720000108868	ENSGT00940000155472.a.a	ENSGT00940000164481.b.b	ENSGT00940000157212.A	ENSGT00940000159657.d.h	ENSGT01100000263518.B.b.a.a	ENSGT00940000164289.a	ENSGT01050000244850.A.a.o.a #16	ENSGT00390000011863.c
Lumpfish	MODERN SPECIES	22	kcnd3 (ENSCLMG00005008523)	ndnl2 (ENSCLMG00005008521)	ENSCLMG00005005624	ENSCLMG00005005400	ENSCLMG00005005392	IQSEC2 (ENSCLMG00005005386)	zgc:86609 (ENSCLMG00005005382)	USP11 (ENSCLMG00005005379)	rfc2 (ENSCLMG00005005354)	ENSCLMG00005001454	ENSCLMG00005001267	ENSCLMG00005001266	edem2 (ENSCLMG00005001222)	ENSCLMG00005001220	snx21 (ENSCLMG00005001219)	ENSCLMG00005001217 #22	ENSCLMG00005001216	ENSCLMG00005001215	hm13 (ENSCLMG00005000900)	mrgbp (ENSCLMG00005000892)	ENSCLMG00005000891	ENSCLMG00005000889	ENSCLMG00005000678	itpr3 (ENSCLMG00005000658)	ENSCLMG00005000622	ENSCLMG00005000619	gripap1 (ENSCLMG00005000617)	ENSCLMG00005000612	ENSCLMG00005000611	ENSCLMG00005000600	ENSCLMG00005000598
Stickleback	MODERN SPECIES	128														mrgbp (ENSGACG00000000527)	hm13 (ENSGACG00000000521)	ENSGACG00000000518 #22	ENSGACG00000000517	snx21 (ENSGACG00000000515)	ENSGACG00000000513	ENSGACG00000000511	edem2 (ENSGACG00000000505)	ENSGACG00000000504	ENSGACG00000000501	ENSGACG00000000487	rfc2 (ENSGACG00000000479)	USP11 (ENSGACG00000000466)	zgc:86609 (ENSGACG00000000454)	PDZD4 (ENSGACG00000000453)
Perciformes_a	ANCESTRAL SPECIES	83														ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000159233	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.a.a	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A
Pike perch	MODERN SPECIES	266														ENSSLUG00000006312	snx21 (ENSSLUG00000006313)	ENSSLUG00000006321 #22	ENSSLUG00000006334	ENSSLUG00000006339	ENSSLUG00000006344	ENSSLUG00000006353	ENSSLUG00000006359	st14b (ENSSLUG00000006373)	ENSSLUG00000006583	ENSSLUG00000006584
Channel bull blenny	MODERN SPECIES	21	ENSCGOG00000001944	ENSCGOG00000001935	ENSCGOG00000001934	ENSCGOG00000001932	ENSCGOG00000001929	ENSCGOG00000001926	ENSCGOG00000001895	ENSCGOG00000001887	ENSCGOG00000001881	ENSCGOG00000001877	ENSCGOG00000001876	ENSCGOG00000001873	ENSCGOG00000001872	ENSCGOG00000001870	snx21 (ENSCGOG00000001867)	ENSCGOG00000001862 #22	ENSCGOG00000001857	edem2 (ENSCGOG00000001850)	ENSCGOG00000001847	ENSCGOG00000001843	ENSCGOG00000001835	hm13 (ENSCGOG00000001423)	mrgbp (ENSCGOG00000001371)	ENSCGOG00000001113	ENSCGOG00000001096	GPR37L1 (ENSCGOG00000000729)	arl8a (ENSCGOG00000000717)	ENSCGOG00000000712	porcn (ENSCGOG00000000703)	wdr13 (ENSCGOG00000000584)	gpr173 (ENSCGOG00000000553)
Eupecaria_C	ANCESTRAL SPECIES	31	ENSGT00950000183062.a.b.b.b	ENSGT00940000159667.a	ENSGT00390000005780.a	ENSGT00940000160485	ENSGT00550000075050	ENSGT00950000182872.f.a.a.a.a.b	ENSGT00940000156477.d.b	ENSGT00940000166641	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.b.b	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.a.a	ENSGT00940000163911.a.a.b.a.a.b.a.b	ENSGT00940000159233	ENSGT00940000163908	ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT00940000164481.b.b	ENSGT00940000155472.a.a	ENSGT00720000108868	ENSGT00940000164289.a	ENSGT01050000244850.A.a.o.a #16	ENSGT00390000011863.c	ENSGT00940000155869
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	42	ENSGT00940000157506.f	ENSGT00950000183062.a.b.b.b	ENSGT00940000159667.a	ENSGT00390000005780.a	ENSGT00940000160485	ENSGT00550000075050	ENSGT00950000182872.f.a.a.a.a.b	ENSGT00940000156477.d.b	ENSGT00940000166641	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.b.b	ENSGT00940000163911.a.a.b.a.a.b.a.b	ENSGT00940000159233	ENSGT00940000163908	ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT00940000164481.b.b	ENSGT00940000155472.a.a	ENSGT00720000108868	ENSGT00940000164289.a	ENSGT01050000244850.A.a.o.a #16	ENSGT00390000011863.c	ENSGT00940000155869
European seabass	MODERN SPECIES	14	ENSDLAG00005026959	ENSDLAG00005024008	ENSDLAG00005026897	ENSDLAG00005031130	ENSDLAG00005027774	ENSDLAG00005029673	ENSDLAG00005002881	ENSDLAG00005002897	ENSDLAG00005034554	ENSDLAG00005031115	ENSDLAG00005004194	ENSDLAG00005033703	ENSDLAG00005023971	ENSDLAG00005023954	ENSDLAG00005027452	ENSDLAG00005034479 #22	ENSDLAG00005023832	ENSDLAG00005033169	ENSDLAG00005023787	ENSDLAG00005023701	ENSDLAG00005017412	ENSDLAG00005017027	ENSDLAG00005033805	ENSDLAG00005016990	ENSDLAG00005027131	ENSDLAG00005029493	ENSDLAG00005012814	ENSDLAG00005013877	ENSDLAG00005004037	kcnd1 (ENSDLAG00005031354)	ENSDLAG00005029977
Large yellow croaker	MODERN SPECIES	29	ENSLCRG00005006916	ENSLCRG00005006891	st14b (ENSLCRG00005006715)	ENSLCRG00005006663	arl8a (ENSLCRG00005006649)	GPR37L1 (ENSLCRG00005006642)	itpr3 (ENSLCRG00005004032)	ENSLCRG00005003550	SULF2 (ENSLCRG00005003400)	MRGBP (ENSLCRG00005003315)	hm13 (ENSLCRG00005003043)	ENSLCRG00005002917	ENSLCRG00005002832	ENSLCRG00005002801	snx21 (ENSLCRG00005002771)	ENSLCRG00005002745 #22	kcnd1 (ENSLCRG00005002725)	gripap1 (ENSLCRG00005002643)	ptpn18 (ENSLCRG00005002490)	plxna3 (ENSLCRG00005002156) #16	bcap31 (ENSLCRG00005021414)	slc6a8 (ENSLCRG00005021393)	slc35a2 (ENSLCRG00005021388)	pim2 (ENSLCRG00005021369)	otud5a (ENSLCRG00005021366)	ENSLCRG00005021351	ENSLCRG00005021350	ENSLCRG00005021349	uxt (ENSLCRG00005021348)	cdk20 (ENSLCRG00005021327)	ENSLCRG00005021172
Gilthead seabream	MODERN SPECIES	21	USP11 (ENSSAUG00010026270)	rfc2 (ENSSAUG00010026262)	ENSSAUG00010026258	ENSSAUG00010026256	ENSSAUG00010026253	ENSSAUG00010026243	ENSSAUG00010026240	ENSSAUG00010026239	ENSSAUG00010026237	ENSSAUG00010026236	ENSSAUG00010026234	edem2 (ENSSAUG00010026216)	ENSSAUG00010026214	ENSSAUG00010026212	snx21 (ENSSAUG00010026211)	ENSSAUG00010026209 #22	hm13 (ENSSAUG00010025991)	mrgbp (ENSSAUG00010025972)	ENSSAUG00010025968	itpr3 (ENSSAUG00010004951)	ENSSAUG00010004409	GPR37L1 (ENSSAUG00010004406)	arl8a (ENSSAUG00010004398)	ENSSAUG00010004390	ENSSAUG00010004382	ENSSAUG00010004377	st14b (ENSSAUG00010004366)	ENSSAUG00010004346	ENSSAUG00010004328	gripap1 (ENSSAUG00010000968)	ENSSAUG00010000881
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	1771																ENSLBEG00000020098 #22	hm13 (ENSLBEG00000020133)
Ballan wrasse	MODERN SPECIES	1418													ENSLBEG00000005831	snx21 (ENSLBEG00000005847)	ENSLBEG00000005873	ENSLBEG00000005894 #22
Ballan wrasse	MODERN SPECIES	4045																ENSLBEG00000004138 #22
Tetraodontidae	ANCESTRAL SPECIES																	ENSGT00950000182846.a.a.a.a.a.a #22
Tetraodon	MODERN SPECIES	26	rbbp5 (ENSTNIG00000005884)	hgh1 (ENSTNIG00000005883)	ENSTNIG00000005882	ENSTNIG00000001565	ENSTNIG00000005881	ENSTNIG00000005880	ENSTNIG00000005879	ENSTNIG00000003332	ENSTNIG00000005872	cyp4t8 (ENSTNIG00000005871)	ENSTNIG00000005867	ENSTNIG00000003962	ENSTNIG00000005865	plod1a (ENSTNIG00000005864)	ENSTNIG00000005863	ENSTNIG00000005841 #22	hm13 (ENSTNIG00000005840)	nkain4 (ENSTNIG00000005839)	kirrel1b (ENSTNIG00000005830)	ENSTNIG00000005829	ENSTNIG00000005825	SLCO3A1 (ENSTNIG00000005824)	ENSTNIG00000005823	ENSTNIG00000005822	zswim8 (ENSTNIG00000005820)	NDST2 (ENSTNIG00000005819)	vax1 (ENSTNIG00000005818)	atp6v1ba (ENSTNIG00000005817)	ENSTNIG00000005812	vstm4a (ENSTNIG00000000558)	LRRC18 (ENSTNIG00000005810)
Ovalentaria	ANCESTRAL SPECIES	6	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.b.b	ENSGT00950000183062.a.b.b.b	ENSGT00940000159667.a	ENSGT00390000005780.a	ENSGT00940000160485	ENSGT00550000075050	ENSGT00950000182872.f.a.a.a.a	ENSGT00940000156477.d.b	ENSGT00940000166641	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.b.a.b	ENSGT00940000163911.a.a.b.a.a.b.a.b	ENSGT00940000159233	ENSGT00940000163908	ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT00940000164481.b.b	ENSGT00940000155472.a.a	ENSGT00720000108868	ENSGT00940000164289.a	ENSGT01050000244850.A.a.o.a #16	ENSGT00390000011863.c	ENSGT00940000155869
Atherinomorphae	ANCESTRAL SPECIES	65												ENSGT00940000159233	ENSGT00940000163908	ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT01010000229732	ENSGT00940000166641	ENSGT00940000156477.d.b	ENSGT00950000182872.f.a.a.a.a	ENSGT00550000075050	ENSGT00940000160485	ENSGT00390000005780.a
Cyprinodontiformes	ANCESTRAL SPECIES	64												ENSGT00940000159233	ENSGT00940000163908	ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT01010000229732	ENSGT00940000166641	ENSGT00940000156477.d.b	ENSGT00950000182872.f.a.a.a.a	ENSGT00550000075050	ENSGT00940000160485	ENSGT00390000005780.a
Aplocheiloidei	ANCESTRAL SPECIES	288													ENSGT00940000159233	ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823
Turquoise killifish	MODERN SPECIES	1624	kcnd1 (ENSNFUG00015023528)	st14b (ENSNFUG00015023531)	Nfu_g_1_015622 (ENSNFUG00015023537)	ENSNFUG00015023545	ENSNFUG00015023547	UXT (ENSNFUG00015023549)	cdk20 (ENSNFUG00015023559)	ENSNFUG00015023566	ENSNFUG00015023569	ENSNFUG00015023574	ENSNFUG00015023578	ENSNFUG00015023582	EDEM2 (ENSNFUG00015023587)	Nfu_g_1_015548 (ENSNFUG00015023602)	SNX21 (ENSNFUG00015023603)	ENSNFUG00015023608 #22	ENSNFUG00015023612	hm13 (ENSNFUG00015023618)	ENSNFUG00015023710	ENSNFUG00015023714	ENSNFUG00015023718	ENSNFUG00015023722	IQSEC2 (ENSNFUG00015023730)	ENSNFUG00015023736	Nfu_g_1_015541 (ENSNFUG00015023743)	ENSNFUG00015023763	RFC2 (ENSNFUG00015023767)	ENSNFUG00015023781	ENSNFUG00015023963	ENSNFUG00015005082	ENSNFUG00015005091
Mangrove rivulus	MODERN SPECIES	683														ENSKMAG00000000752	ENSKMAG00000000797	ENSKMAG00000000811 #22	hm13 (ENSKMAG00000000817)	mrgbp (ENSKMAG00000000877)
Cyprinodontoidei	ANCESTRAL SPECIES	91												ENSGT00940000159233	ENSGT00940000163908	ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A
Poeciliinae	ANCESTRAL SPECIES	52												ENSGT00940000159233	ENSGT00940000163908	ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT00990000204344.b	ENSGT01100000263489.a.a.b.a.a.b.b.b.a.a.a.b.a.a.b	ENSGT01100000263489.a.a.b.a.a.b.b.b.a.a.a.a.b.a	ENSGT01100000263489.a.a.b.a.a.b.b.b.a.a.a.b.a.a.a	ENSGT01070000254339.a	ENSGT00940000166641	ENSGT00940000156477.d.b
Poecilia	ANCESTRAL SPECIES	62												ENSGT00940000159233	ENSGT00940000163908	ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT00990000204344.b	ENSGT01100000263489.a.a.b.a.a.b.b.b.a.a.a.b.a.a.b	ENSGT01100000263489.a.a.b.a.a.b.b.b.a.a.a.a.b.a	ENSGT01100000263489.a.a.b.a.a.b.b.b.a.a.a.b.a.a.a	ENSGT01070000254339.a	ENSGT00940000166641	ENSGT00940000156477.d.b
NAME_6	ANCESTRAL SPECIES	327												ENSGT00940000159233	ENSGT00940000163908	ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A
Amazon molly	MODERN SPECIES	721											ENSPFOG00000010521	edem2 (ENSPFOG00000010582)	ENSPFOG00000010706	ENSPFOG00000010711	snx21 (ENSPFOG00000010715)	ENSPFOG00000010776 #22	hm13 (ENSPFOG00000010955)	mrgbp (ENSPFOG00000011092)	SULF2 (ENSPFOG00000011105)	ENSPFOG00000011212	itpr3 (ENSPFOG00000011533)	GPR37L1 (ENSPFOG00000012421)	arl8a (ENSPFOG00000012465)	ENSPFOG00000012531	ENSPFOG00000012573	ENSPFOG00000012671	ENSPFOG00000012672
Sailfin molly	MODERN SPECIES	736																ENSPLAG00000013096 #22	hm13 (ENSPLAG00000013007)	mrgbp (ENSPLAG00000013000)	SULF2 (ENSPLAG00000012971)	ENSPLAG00000012915	ENSPLAG00000012900	ENSPLAG00000000297
Platyfish	MODERN SPECIES		rad51c (ENSXMAG00000003344)	abt1 (ENSXMAG00000003341)	CDK16 (ENSXMAG00000003320)	ENSXMAG00000021516	ENSXMAG00000027352	ENSXMAG00000024715	ENSXMAG00000027647	ENSXMAG00000028679	ENSXMAG00000029701	ENSXMAG00000029059	ENSXMAG00000028440	edem2 (ENSXMAG00000029629)	ENSXMAG00000003317	ENSXMAG00000003316	snx21 (ENSXMAG00000003313)	ENSXMAG00000003305 #22	hm13 (ENSXMAG00000003296)	mrgbp (ENSXMAG00000003291)	SULF2 (ENSXMAG00000003257)	ENSXMAG00000027329	itpr3 (ENSXMAG00000013373)	GPR37L1 (ENSXMAG00000013366)	arl8a (ENSXMAG00000025580)	ENSXMAG00000009860	ENSXMAG00000029608	ENSXMAG00000029754	ENSXMAG00000022012	ENSXMAG00000025291	ENSXMAG00000003216	ENSXMAG00000008812	ENSXMAG00000008817
NAME_4	ANCESTRAL SPECIES	287												ENSGT00940000159233	ENSGT00940000163908	ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478.j	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A
Mummichog	MODERN SPECIES	467											ENSFHEG00000001947	ENSFHEG00000001953	ENSFHEG00000001956	edem2 (ENSFHEG00000001974)	snx21 (ENSFHEG00000001980)	ENSFHEG00000001993 #22	hm13 (ENSFHEG00000002018)	mrgbp (ENSFHEG00000002029)	SULF2 (ENSFHEG00000002043)	ENSFHEG00000000754	ENSFHEG00000000755	ENSFHEG00000002140
Sheepshead minnow	MODERN SPECIES	1128										sdr39u1 (ENSCVAG00000005344)	ENSCVAG00000005357	parp2 (ENSCVAG00000000616)	ENSCVAG00000005436	zgc:66427 (ENSCVAG00000000657)	ENSCVAG00000005473	dnase1l1 (ENSCVAG00000005479) #22	ENSCVAG00000005484	mrgbp (ENSCVAG00000005490)
Oryzias	ANCESTRAL SPECIES	58											ENSGT01030000235579	ENSGT00940000159233	ENSGT00940000163908	ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT00940000155597.u.b	ENSGT00940000166487	ENSGT00390000012058.c.b	ENSGT00940000155572.a.a	ENSGT00390000009113.c	ENSGT00940000161218	ENSGT00940000164033	ENSGT00940000157729
Oryzias_b	ANCESTRAL SPECIES	2											ENSGT01030000235579	ENSGT00940000159233	ENSGT00940000163908	ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000155094.b.x.b.c.a	ENSGT00940000166720	ENSGT00950000182835.c.c.g.b	ENSGT00940000162980	ENSGT00950000182994.B.a.a.a #18	ENSGT00940000156650.i #19	ENSGT00390000017567	ENSGT01100000265579	ENSGT00940000156872.c	ENSGT00940000159117	ENSGT00940000158250.d.b	ENSGT00940000159686
Indian medaka	MODERN SPECIES	23	tpd52l2b (ENSOMEG00000015371)	ppdpfb (ENSOMEG00000015394)	ptk6b (ENSOMEG00000015610)	ENSOMEG00000015663	IQSEC2 (ENSOMEG00000015738)	ENSOMEG00000015763	ENSOMEG00000015772	ENSOMEG00000015787	ENSOMEG00000015804	edem2 (ENSOMEG00000015851)	ENSOMEG00000015892	ENSOMEG00000015914	DNAH5 (ENSOMEG00000016006)	ENSOMEG00000016071	snx21 (ENSOMEG00000016098)	dnase1l1 (ENSOMEG00000016136) #22	hm13 (ENSOMEG00000016232)	mrgbp (ENSOMEG00000016272)	SULF2 (ENSOMEG00000016431)	ENSOMEG00000016460	ugt5e1 (ENSOMEG00000016471)	pfkfb1 (ENSOMEG00000016573)	ENSOMEG00000016640	gdi1 (ENSOMEG00000016690) #18	atp6ap1b (ENSOMEG00000016723) #19	taf8 (ENSOMEG00000016765)	camk1gb (ENSOMEG00000016801)	ENSOMEG00000016818	mical1 (ENSOMEG00000016860)	src (ENSOMEG00000016964)	kcng1 (ENSOMEG00000016998)
Javanese ricefish	MODERN SPECIES	21	NPBWR2 (ENSOJAG00000011314)	oprl1 (ENSOJAG00000011300)	FAM187A (ENSOJAG00000011268)	rgs19 (ENSOJAG00000011255)	ENSOJAG00000011241	tcea2 (ENSOJAG00000011231)	cfap206 (ENSOJAG00000011211)	ENSOJAG00000011190	ENSOJAG00000011182	ENSOJAG00000011159	ENSOJAG00000011123	edem2 (ENSOJAG00000010924)	ENSOJAG00000010907	ENSOJAG00000010895	snx21 (ENSOJAG00000010890)	dnase1l1 (ENSOJAG00000010877) #22	hm13 (ENSOJAG00000010784)	mrgbp (ENSOJAG00000010773)	SULF2 (ENSOJAG00000010501)	ENSOJAG00000010433	ugt5e1 (ENSOJAG00000010426)	pfkfb1 (ENSOJAG00000010381)	ITIH6 (ENSOJAG00000010317)	gdi1 (ENSOJAG00000010196) #18	atp6ap1b (ENSOJAG00000010172) #19	taf8 (ENSOJAG00000010080)	ENSOJAG00000010058	camk1gb (ENSOJAG00000010022)	mical1 (ENSOJAG00000009763)	src (ENSOJAG00000009352)	kcng1 (ENSOJAG00000009295)
Oryzias_a	ANCESTRAL SPECIES	77											ENSGT01030000235579	ENSGT00940000159233	ENSGT00940000163908	ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT00940000155597.u.b	ENSGT00940000166487	ENSGT00390000012058.c.b	ENSGT00940000155572.a.a	ENSGT00390000009113.c	ENSGT00940000161218	ENSGT00940000161518	ENSGT00940000180163
Japanese Medaka HdrR	MODERN SPECIES	21	ENSORLG00000019017	ENSORLG00000025286	NDRG3 (ENSORLG00000018920)	rfc2 (ENSORLG00000018805)	USP11 (ENSORLG00000018769)	zgc:86609 (ENSORLG00000018675)	ENSORLG00000026237	ENSORLG00000018604	ENSORLG00000026749	ENSORLG00000026744	ENSORLG00000022751	edem2 (ENSORLG00000018552)	ENSORLG00000018517	ENSORLG00000021954	snx21 (ENSORLG00000030556)	ENSORLG00000018493 #22	hm13 (ENSORLG00000018474)	mrgbp (ENSORLG00000027304)	ENSORLG00000018373	itpr3 (ENSORLG00000018298)	ENSORLG00000029726	ENSORLG00000018276	arl8a (ENSORLG00000028909)	ENSORLG00000018268	ENSORLG00000022324	efhd2 (ENSORLG00000026088)	tpd52l2b (ENSORLG00000025032)	ENSORLG00000022579	ppdpfb (ENSORLG00000018263)	ENSORLG00000026075	ptk6b (ENSORLG00000020286)
Chinese medaka	MODERN SPECIES	469													ENSOSIG00000016266	ENSOSIG00000016267	snx21 (ENSOSIG00000016274)	ENSOSIG00000016280 #22	hm13 (ENSOSIG00000016283)
Ovalentaria_B	ANCESTRAL SPECIES	2	ENSGT00940000157506.f	ENSGT01090000260193	ENSGT00990000204332	ENSGT00940000159667.a	ENSGT00390000005780.a	ENSGT00940000160485	ENSGT00550000075050	ENSGT00950000182872.f.a.a.a.a	ENSGT00940000156477.d.b	ENSGT00940000166641	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.b.b	ENSGT00940000159233	ENSGT00940000163908	ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT00940000164481.b.b	ENSGT00940000155472.a.a	ENSGT00720000108868	ENSGT00940000164289.a	ENSGT01050000244850.A.a.o.a #16	ENSGT00390000011863.c	ENSGT00940000155869
Pomacentridae	ANCESTRAL SPECIES	94	ENSGT00940000159438	ENSGT00390000003348	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00940000167532	ENSGT00940000175919	ENSGT00940000154102.b.a.b	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b.g	ENSGT00390000002062	ENSGT00940000156805	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000012692	ENSGT00940000156963.a.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT00940000164481.b.b	ENSGT00940000155472.a.a	ENSGT00720000108868	ENSGT00940000164289.a	ENSGT01050000244850.A.a.o.a #16	ENSGT00390000011863.c.n	ENSGT01050000244850.A.a.p #16
Pomacentridae_A	ANCESTRAL SPECIES	92	ENSGT00940000157503.j	ENSGT00940000159438	ENSGT00390000003348	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00940000167532	ENSGT00940000154102.b.a.b	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b.g	ENSGT00390000002062	ENSGT00940000156805	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000012692	ENSGT00940000156963.a.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT00940000164481.b.b	ENSGT00940000155472.a.a	ENSGT00720000108868	ENSGT00940000164289.a	ENSGT01050000244850.A.a.o.a #16	ENSGT01050000244850.A.a.p #16	ENSGT00390000011863.c.m
Amphiprion	ANCESTRAL SPECIES	119	ENSGT00940000157503.j	ENSGT00940000159438	ENSGT00390000003348	ENSGT00530000063687.b.b.b #30	ENSGT00940000160502 #32	ENSGT00940000167532	ENSGT00940000154102.b.a.b	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b.g	ENSGT00390000002062	ENSGT00940000156805	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000012692	ENSGT00940000156963.a.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT00940000164481.b.b	ENSGT00940000155472.a.a	ENSGT00720000108868	ENSGT00940000164289.a	ENSGT01050000244850.A.a.o.a #16	ENSGT01050000244850.A.a.p #16	ENSGT00390000011863.c.m
Orange clownfish	MODERN SPECIES	22	FGD1 (ENSAPEG00000024070)	ENSAPEG00000024051	mecp2 (ENSAPEG00000023997) #30	ENSAPEG00000023917 #32	ENSAPEG00000023882	abcd1 (ENSAPEG00000023814)	ENSAPEG00000023797	ENSAPEG00000023723	PLXNB3 (ENSAPEG00000023646)	SRPK3 (ENSAPEG00000023629)	abt1 (ENSAPEG00000023617)	rad51c (ENSAPEG00000023593)	GRM6 (ENSAPEG00000023556)	tsr2 (ENSAPEG00000023549)	CDK16 (ENSAPEG00000023524)	dnase1l1 (ENSAPEG00000023457) #22	hm13 (ENSAPEG00000023409)	mrgbp (ENSAPEG00000023381)	SULF2 (ENSAPEG00000023292)	ENSAPEG00000023270	ENSAPEG00000023263	ENSAPEG00000023201	GPR37L1 (ENSAPEG00000023190)	arl8a (ENSAPEG00000023154)	ENSAPEG00000023142	ENSAPEG00000023050	kcnd1 (ENSAPEG00000023041)	gripap1 (ENSAPEG00000023013)	ptpn18 (ENSAPEG00000022989)	ENSAPEG00000022970	ENSAPEG00000022962
Clown anemonefish	MODERN SPECIES	3552															CDK16 (ENSAOCG00000005940)	dnase1l1 (ENSAOCG00000005776) #22	hm13 (ENSAOCG00000000269)	mrgbp (ENSAOCG00000005693)
Spiny chromis	MODERN SPECIES	2246													GRM6 (ENSAPOG00000004192)	ENSAPOG00000004150	CDK16 (ENSAPOG00000004056)	dnase1l1 (ENSAPOG00000004021) #22
Bicolor damselfish	MODERN SPECIES	2454									SRPK3 (ENSSPAG00000008057)	abt1 (ENSSPAG00000008031)	rad51c (ENSSPAG00000008017)	ENSSPAG00000008011	GRM6 (ENSSPAG00000007981)	ENSSPAG00000007968	CDK16 (ENSSPAG00000007921)	dnase1l1 (ENSSPAG00000007887) #22
Cichlidae	ANCESTRAL SPECIES		ENSGT00940000159667.a	ENSGT00390000005780.a	ENSGT00940000160485	ENSGT00550000075050	ENSGT00950000182872.f.a.a.a.a	ENSGT00940000156477.d.b	ENSGT00940000166641	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.b.b.k.a.b.a	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.b.a.b	ENSGT00940000163911.a.a.b.a.a.b.a.b	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.b.b.l	ENSGT00940000159233	ENSGT00940000156473.e	ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT00940000164481.b.b.a.a	ENSGT00940000164481.b.b.a.b	ENSGT00940000155472.a.a	ENSGT00720000108868	ENSGT00940000164289.a	ENSGT01050000244850.A.a.o.a #16	ENSGT00390000011863.c
Pseudocrenilabrinae	ANCESTRAL SPECIES	5	ENSGT00950000183062.a.b.b.b	ENSGT00940000159667.a	ENSGT00390000005780.a	ENSGT00940000160485	ENSGT00550000075050	ENSGT00950000182872.f.a.a.a.a	ENSGT00940000156477.d.b	ENSGT00940000166641	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.b.b.k.a.b.a	ENSGT00940000163911.a.a.b.a.a.b.a.b	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.b.b.l	ENSGT00940000159233	ENSGT00940000156473.e	ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT00940000164481.b.b.a.a	ENSGT00940000164481.b.b.a.b.b	ENSGT00940000164481.b.b.a.b.a	ENSGT00940000155472.a.a	ENSGT00720000108868	ENSGT00940000164289.a	ENSGT01050000244850.A.a.o.a #16
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	18	ENSGT00990000204332	ENSGT00940000159667.a	ENSGT00390000005780.a	ENSGT00940000160485	ENSGT00550000075050	ENSGT00950000182872.f.a.a.a.a	ENSGT00940000156477.d.b	ENSGT00940000166641	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.b.b.k.a.b.a	ENSGT00940000163911.a.a.b.a.a.b.a.b	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.b.b.l	ENSGT00940000159233	ENSGT00940000156473.e	ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT00940000164481.b.b.a.a	ENSGT00940000164481.b.b.a.b.b	ENSGT00940000164481.b.b.a.b.a	ENSGT00940000155472.a.a	ENSGT00720000108868	ENSGT00940000164289.a	ENSGT01050000244850.A.a.o.a #16
Haplochromini	ANCESTRAL SPECIES	20	ENSGT00950000183062.a.b.b.b	ENSGT00940000159667.a	ENSGT00390000005780.a	ENSGT00940000160485	ENSGT00550000075050	ENSGT00950000182872.f.a.a.a.a	ENSGT00940000156477.d.b	ENSGT00940000166641	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.b.b.k.a.b.a	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.b.b.k.a.a.a	ENSGT00940000159233	ENSGT00940000156473.e	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.b.b.k.b.a.a	ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000160318.c.a.h	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT00940000154615.i.a.a.d.j	ENSGT00940000164481.b.b.a.a	ENSGT00940000164481.b.b.a.b.b	ENSGT00940000164481.b.b.a.b.a	ENSGT00940000155472.a.a	ENSGT00720000108868	ENSGT00940000164289.a
Haplochromini_A	ANCESTRAL SPECIES	17	ENSGT00990000204332	ENSGT00940000159667.a	ENSGT00390000005780.a	ENSGT00940000160485	ENSGT00550000075050	ENSGT00950000182872.f.a.a.a.a	ENSGT00940000156477.d.b	ENSGT00940000166641	ENSGT00940000163911.a.a.b.a.a.b.a.b.a	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.b.b.k.a.a.a	ENSGT00940000159233	ENSGT00940000156473.e	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.b.b.k.b.a.a	ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000180988	ENSGT00940000160318.c.a.h	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT00940000154615.i.a.a.d.j	ENSGT00940000164481.b.b.a.a	ENSGT00940000164481.b.b.a.b.b	ENSGT00940000164481.b.b.a.b.a	ENSGT00940000155472.a.a	ENSGT00720000108868
P. nyererei	MODERN SPECIES	511	ENSPNYG00000004736	zgc:86609 (ENSPNYG00000004775)	USP11 (ENSPNYG00000004815)	rfc2 (ENSPNYG00000004871)	ENSPNYG00000004896	ENSPNYG00000004932	ENSPNYG00000004973	ENSPNYG00000005019	ENSPNYG00000005039	ENSPNYG00000005060	edem2 (ENSPNYG00000005075)	ENSPNYG00000005120	ENSPNYG00000005144	ENSPNYG00000005160	snx21 (ENSPNYG00000005182)	ENSPNYG00000005198 #22	hm13 (ENSPNYG00000005225)	mrgbp (ENSPNYG00000005278)	SULF2 (ENSPNYG00000005333)	ENSPNYG00000005493	ENSPNYG00000005519	ENSPNYG00000005601	itpr3 (ENSPNYG00000005634)	GPR37L1 (ENSPNYG00000005778)	arl8a (ENSPNYG00000005798)	ENSPNYG00000005882
Haplochromini_B	ANCESTRAL SPECIES	14	ENSGT00990000204332	ENSGT00940000159667.a	ENSGT00390000005780.a	ENSGT00940000160485	ENSGT00550000075050	ENSGT00950000182872.f.a.a.a.a	ENSGT00940000156477.d.b	ENSGT00940000166641	ENSGT00940000163911.a.a.b.a.a.b.a.b.a	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.b.b.k.a.a.a	ENSGT00940000159233	ENSGT00940000156473.e	ENSGT01100000263473.a.b.g.a.a.b.a.a.a.b.b.k.b.a.a	ENSGT00650000094883	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151	ENSGT00940000180988	ENSGT00940000160318.c.a.h	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a	ENSGT00940000159657.d.h	ENSGT00940000157212.A	ENSGT00940000154615.i.a.a.d.j.b.a	ENSGT00940000164481.b.b.a.a	ENSGT00940000164481.b.b.a.b.b	ENSGT00940000164481.b.b.a.b.a	ENSGT00940000155472.a.a	ENSGT00720000108868
Zebra mbuna	MODERN SPECIES	1103	ENSMZEG00005026865	ENSMZEG00005026850	acss2 (ENSMZEG00005026845)	mapre1b (ENSMZEG00005026843)	dnmt3bb.2 (ENSMZEG00005026841)	dnmt3bb.1 (ENSMZEG00005026838)	commd7 (ENSMZEG00005026836)	ENSMZEG00005026833	ENSMZEG00005026832	ENSMZEG00005026830	ENSMZEG00005026828	edem2 (ENSMZEG00005026827)	ENSMZEG00005026825	ENSMZEG00005026823	snx21 (ENSMZEG00005026821)	ENSMZEG00005026818 #22	hm13 (ENSMZEG00005026817)	mrgbp (ENSMZEG00005026816)	sulf2b (ENSMZEG00005026815)	ENSMZEG00005026814	itpr3 (ENSMZEG00005026813)	GPR37L1 (ENSMZEG00005026812)	arl8a (ENSMZEG00005026811)	ENSMZEG00005026810	MFAP4 (ENSMZEG00005026809)	SOX18 (ENSMZEG00005026808)	tcea2 (ENSMZEG00005026807)	rgs19 (ENSMZEG00005026806)	ENSMZEG00005026805	ENSMZEG00005026804	oprl1 (ENSMZEG00005026803)
Eastern happy	MODERN SPECIES	12	USP11 (ENSACLG00000010398)	rfc2 (ENSACLG00000010639)	ENSACLG00000010649	ENSACLG00000010673	ENSACLG00000010705	ENSACLG00000010720	ENSACLG00000010726	ENSACLG00000010735	ENSACLG00000010741	edem2 (ENSACLG00000010800)	ENSACLG00000010952	ENSACLG00000011025	ENSACLG00000011034	ENSACLG00000011048	snx21 (ENSACLG00000011065)	ENSACLG00000011080 #22	hm13 (ENSACLG00000011116)	mrgbp (ENSACLG00000011208)	SULF2 (ENSACLG00000011582)	ENSACLG00000011636	ENSACLG00000011652	itpr3 (ENSACLG00000011747)	ENSACLG00000011955	ENSACLG00000011962	GPR37L1 (ENSACLG00000011978)	arl8a (ENSACLG00000011996)	ENSACLG00000012010	ENSACLG00000012051	ENSACLG00000012076	ENSACLG00000012089	st14b (ENSACLG00000012144)
Lyretail cichlid	MODERN SPECIES	447	ENSNBRG00000011419	ENSNBRG00000011407	ENSNBRG00000011388	ENSNBRG00000011375	ENSNBRG00000011327	IQSEC2 (ENSNBRG00000011249)	zgc:86609 (ENSNBRG00000011199)	ENSNBRG00000011148	ENSNBRG00000011128	ENSNBRG00000011071	ENSNBRG00000011030	ENSNBRG00000011008	edem2 (ENSNBRG00000010985)	ENSNBRG00000010970	snx21 (ENSNBRG00000010951)	dnase1l1 (ENSNBRG00000010917) #22	hm13 (ENSNBRG00000010862)	mrgbp (ENSNBRG00000010849)	ENSNBRG00000010836	SULF2 (ENSNBRG00000010785)	ENSNBRG00000010741	ENSNBRG00000010698	GPR37L1 (ENSNBRG00000010687)	arl8a (ENSNBRG00000010663)	ENSNBRG00000010562
Nile tilapia	MODERN SPECIES	12	IQSEC2 (ENSONIG00000014778)	zgc:86609 (ENSONIG00000014772)	USP11 (ENSONIG00000014753)	rfc2 (ENSONIG00000014751)	ENSONIG00000041100	ENSONIG00000014739	ENSONIG00000038163	ENSONIG00000014733	ENSONIG00000027359	ENSONIG00000041096	edem2 (ENSONIG00000014728)	ENSONIG00000031768	ENSONIG00000041193	ENSONIG00000022678	snx21 (ENSONIG00000014724)	ENSONIG00000014719 #22	hm13 (ENSONIG00000014713)	mrgbp (ENSONIG00000014710)	SULF2 (ENSONIG00000014704)	ENSONIG00000014700	ENSONIG00000041759	itpr3 (ENSONIG00000014673)	arl8a (ENSONIG00000014667)	GPR37L1 (ENSONIG00000027203)	ENSONIG00000014661	st14b (ENSONIG00000014650)	st14b (ENSONIG00000014645)	st14b (ENSONIG00000030483)	kcnd1 (ENSONIG00000014643)	gripap1 (ENSONIG00000014636)	ptpn18 (ENSONIG00000014635)
Midas cichlid	MODERN SPECIES	1098									ENSACIG00000022253	ENSACIG00000022259	edem2 (ENSACIG00000022266)	ENSACIG00000000200	ENSACIG00000000216	ENSACIG00000000233	snx21 (ENSACIG00000000248)	ENSACIG00000000316 #22	hm13 (ENSACIG00000000342)	mrgbp (ENSACIG00000000371)	SULF2 (ENSACIG00000000397)	ENSACIG00000000540	itpr3 (ENSACIG00000000664)	ENSACIG00000000844	GPR37L1 (ENSACIG00000000856)	arl8a (ENSACIG00000000868)	ENSACIG00000000900
Tiger tail seahorse	MODERN SPECIES	358								ENSHCOG00000005644	ENSHCOG00000005615	ENSHCOG00000005535	GPR37L1 (ENSHCOG00000005523)	arl8a (ENSHCOG00000005512)	SRPK3 (ENSHCOG00000005481)	mrgbp (ENSHCOG00000005376)	hm13 (ENSHCOG00000005368)	ENSHCOG00000000877 #22	ENSHCOG00000005329	edem2 (ENSHCOG00000005313)	ENSHCOG00000005306	rps21 (ENSHCOG00000005285)	ENSHCOG00000005274	ENSHCOG00000005268	ENSHCOG00000005237
Pinecone sodierfish	MODERN SPECIES	21	SULF2 (ENSMMDG00005004792)	ENSMMDG00005006012	ENSMMDG00005006018	ENSMMDG00005006021	ENSMMDG00005006023	ENSMMDG00005006026	ENSMMDG00005006027	ENSMMDG00005006029	USP11 (ENSMMDG00005006034)	rfc2 (ENSMMDG00005006059)	ENSMMDG00005006068	ENSMMDG00005006118	ENSMMDG00005006121	edem2 (ENSMMDG00005006127)	snx21 (ENSMMDG00005006158)	ENSMMDG00005006160 #22	mrgbp (ENSMMDG00005006165)	hm13 (ENSMMDG00005006202)	zgc:86609 (ENSMMDG00005007749)	ENSMMDG00005007753	ENSMMDG00005007756	ENSMMDG00005007759	ENSMMDG00005007760	ENSMMDG00005007762	ENSMMDG00005007764	IQSEC2 (ENSMMDG00005007770)	ENSMMDG00005007808	ENSMMDG00005007809	ENSMMDG00005007810	ENSMMDG00005007811	ENSMMDG00005007813
Otomorpha	ANCESTRAL SPECIES	103					ENSGT00950000183146.b.a	ENSGT00530000063735.a.a	ENSGT00940000156550.b	ENSGT00940000154280	ENSGT00940000158156.b.a.b	ENSGT00940000167624	ENSGT00510000047225.b	ENSGT00940000157869.e.a	ENSGT00390000013390	ENSGT00940000157238.b	ENSGT00950000182952.C.g.a	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00390000003897 #23	ENSGT00940000153588.b #25	ENSGT00510000050141.b	ENSGT00940000158219.a	ENSGT00390000003937	ENSGT00940000165254.c.a	ENSGT00940000155445	ENSGT00390000001092	ENSGT00940000158549	ENSGT00940000155311.C.c	ENSGT00940000164248.b.b	ENSGT00940000153541.B	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369
Otophysi	ANCESTRAL SPECIES	2	ENSGT00940000156616.j	ENSGT00390000006988	ENSGT00940000157530.a	ENSGT00940000167423	ENSGT00950000183146.b.a	ENSGT00530000063735.a.a	ENSGT00940000156550.b	ENSGT00940000154280	ENSGT00940000158156.b.a.b	ENSGT00940000167624	ENSGT00510000047225.b	ENSGT00940000157869.e.a	ENSGT00390000013390	ENSGT00940000157238.b	ENSGT00950000182952.C.g.a	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00390000003897 #23	ENSGT00940000153588.b #25	ENSGT00510000050141.b	ENSGT00940000158219.a	ENSGT00390000003937	ENSGT00940000165254.c.a	ENSGT00940000155445	ENSGT00390000001092	ENSGT00940000158549	ENSGT00940000155311.C.c	ENSGT00940000164248.b.b	ENSGT00940000153541.B	ENSGT00940000161969	ENSGT00940000159748	ENSGT00390000003093
Characiphysae	ANCESTRAL SPECIES	5	ENSGT00940000156616.j	ENSGT00390000006988	ENSGT00940000157530.a	ENSGT00940000167423	ENSGT00950000183146.b.a	ENSGT00530000063735.a.a	ENSGT00940000156550.b	ENSGT00940000154280	ENSGT00940000158156.b.a.b	ENSGT00940000167624	ENSGT00510000047225.b	ENSGT00940000157869.e.a	ENSGT00390000013390	ENSGT00940000157238.b	ENSGT00950000182952.C.g.a	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00390000003897 #23	ENSGT00940000153588.b #25	ENSGT00510000050141.b	ENSGT00940000158219.a	ENSGT00390000003937	ENSGT00940000165254.c.a	ENSGT00940000155445	ENSGT00390000001092	ENSGT00940000158549	ENSGT00940000155311.C.c	ENSGT00940000164248.b.b	ENSGT00940000153541.B	ENSGT00940000161969	ENSGT00940000159748	ENSGT00390000003093
Channel catfish	MODERN SPECIES	6	rnf207 (ENSIPUG00000020036)	icmt (ENSIPUG00000020010)	si:ch73-21g5.7 (ENSIPUG00000020005)	ENSIPUG00000020003	ENSIPUG00000019994	ENSIPUG00000019988	her12 (ENSIPUG00000019985)	tas1r1 (ENSIPUG00000019941)	IFFO2 (ENSIPUG00000019915)	UBR4 (ENSIPUG00000019733)	EMC1 (ENSIPUG00000019703)	yteT (ENSIPUG00000019644)	ERRFI1 (ENSIPUG00000019629)	pax7b (ENSIPUG00000019609)	kcnab2b (ENSIPUG00000019536)	dnase1l1 (ENSIPUG00000019455) #22	rpl10 (ENSIPUG00000019491) #23	FLNA (ENSIPUG00000019142) #25	emd (ENSIPUG00000019096)	ENSIPUG00000019083	haus7 (ENSIPUG00000019059)	atp2b3 (ENSIPUG00000018898)	fam58a (ENSIPUG00000018872)	ENSIPUG00000018858	cfap126 (ENSIPUG00000018839)	B4GALT3 (ENSIPUG00000018800)	BGN (ENSIPUG00000018777)	ENSIPUG00000018749	TNNC1 (ENSIPUG00000018737)	tktb (ENSIPUG00000018646)	lrrc23 (ENSIPUG00000018624)
Characiphysae_b	ANCESTRAL SPECIES	8	ENSGT00390000006988	ENSGT00940000157530.a	ENSGT00940000167423	ENSGT00950000183146.b.a	ENSGT00530000063735.a.a	ENSGT00940000156550.b	ENSGT00940000154280	ENSGT00940000158156.b.a.b	ENSGT00940000167624	ENSGT01000000221052	ENSGT00510000047225.b	ENSGT00940000157869.e.a	ENSGT00390000013390	ENSGT00940000157238.b	ENSGT00950000182952.C.g.a	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00390000003897 #23	ENSGT00940000153588.b #25	ENSGT00510000050141.b	ENSGT00940000158219.a	ENSGT00390000003937	ENSGT00940000165254.c.a	ENSGT00940000155445	ENSGT00390000001092	ENSGT00940000158549	ENSGT00940000155311.C.c	ENSGT00940000164248.b.b	ENSGT00940000153541.B	ENSGT00940000161969	ENSGT00940000159748	ENSGT00390000003093
Electric eel	MODERN SPECIES	27	guca1b (ENSEEEG00000005953)	ENSEEEG00000005963	AMIGO3 (ENSEEEG00000005980)	ENSEEEG00000005986	ASB14 (ENSEEEG00000005992)	ENSEEEG00000005995	ENSEEEG00000006002	ENSEEEG00000006005	atp6ap1lb (ENSEEEG00000006008)	slmapb (ENSEEEG00000006009)	ENSEEEG00000006027	kctd6b (ENSEEEG00000006032)	ENSEEEG00000006033	ognb (ENSEEEG00000006034)	ENSEEEG00000006035	dnase1l1 (ENSEEEG00000006037) #22	rpl10 (ENSEEEG00000006045) #23	emd (ENSEEEG00000006566)	ENSEEEG00000006567	atp2b3b (ENSEEEG00000006571)	ccnq (ENSEEEG00000006736)	cfap126 (ENSEEEG00000006737)	B4GALT3 (ENSEEEG00000006738)	bgnb (ENSEEEG00000006739)	ENSEEEG00000006741	tnnc1b (ENSEEEG00000006742)	tktb (ENSEEEG00000006770)	lrrc23 (ENSEEEG00000006839)	ENSEEEG00000006843	USP19 (ENSEEEG00000006854)	lamb2 (ENSEEEG00000006991)
Characoidei	ANCESTRAL SPECIES	8	ENSGT00940000156616.j	ENSGT00390000006988	ENSGT00940000157530.a	ENSGT00940000167423	ENSGT00950000183146.b.a	ENSGT00530000063735.a.a	ENSGT00940000156550.b	ENSGT00940000154280	ENSGT00940000158156.b.a.b	ENSGT00940000167624	ENSGT00510000047225.b	ENSGT00940000157869.e.a	ENSGT00390000013390	ENSGT00940000157238.b	ENSGT00950000182952.C.g.a	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00390000003897 #23	ENSGT00940000153588.b #25	ENSGT00510000050141.b	ENSGT00940000158219.a	ENSGT00390000003937	ENSGT00940000165254.c.a	ENSGT00940000155445	ENSGT00390000001092	ENSGT00940000158549	ENSGT00940000155311.C.c	ENSGT00940000164248.b.b	ENSGT00940000153541.B	ENSGT00940000161969	ENSGT00940000159748	ENSGT00390000003093
Red-bellied piranha	MODERN SPECIES	205	guca1b (ENSPNAG00000013671)	ENSPNAG00000002890	AMIGO3 (ENSPNAG00000013698)	ENSPNAG00000002944	ASB14 (ENSPNAG00000002951)	DNAH12 (ENSPNAG00000013990)	atp6ap1lb (ENSPNAG00000014011)	slmapb (ENSPNAG00000014059)	ENSPNAG00000007109	abhd6b (ENSPNAG00000014191)	kctd6b (ENSPNAG00000014210)	UQCC5 (ENSPNAG00000003049)	ognb (ENSPNAG00000003094)	ENSPNAG00000014383	rpl10 (ENSPNAG00000014427) #23	dnase1l1 (ENSPNAG00000004950) #22	FLNA (ENSPNAG00000014526) #25	ENSPNAG00000014540	ENSPNAG00000014563	ENSPNAG00000014576	atp2b3b (ENSPNAG00000003240)	ccnq (ENSPNAG00000014773)	cfap126 (ENSPNAG00000014785)	B4GALT3 (ENSPNAG00000003264)	bgnb (ENSPNAG00000014827)
Mexicana tetra	MODERN SPECIES	6	ENSAMXG00000015824	ENSAMXG00000033193	ENSAMXG00000015505	ASB14 (ENSAMXG00000015403)	DNAH12 (ENSAMXG00000014371)	ENSAMXG00000039356	atp6ap1lb (ENSAMXG00000036282)	ENSAMXG00000041700	slmapb (ENSAMXG00000013746)	ENSAMXG00000013661	abhd6b (ENSAMXG00000043412)	kctd6b (ENSAMXG00000013565)	UQCC5 (ENSAMXG00000037262)	ognb (ENSAMXG00000043851)	ENSAMXG00000013441	dnase1l1 (ENSAMXG00000043674) #22	ENSAMXG00000037190	rpl10 (ENSAMXG00000030047) #23	FLNA (ENSAMXG00000013411) #25	emd (ENSAMXG00000033874)	ENSAMXG00000013402	ENSAMXG00000043619	atp2b3b (ENSAMXG00000013300)	ccnq (ENSAMXG00000033281)	cfap126 (ENSAMXG00000013275)	B4GALT3 (ENSAMXG00000013257)	bgnb (ENSAMXG00000013240)	tnnc1b (ENSAMXG00000013191)	ENSAMXG00000013221	tktb (ENSAMXG00000013176)	lrrc23 (ENSAMXG00000034263)
Cyprinoidei	ANCESTRAL SPECIES		ENSGT00390000006988	ENSGT00940000157530.a	ENSGT00940000167423	ENSGT00950000183146.b.a	ENSGT00530000063735.a.a	ENSGT00940000156550.b	ENSGT00940000154280	ENSGT00940000158156.b.a.b	ENSGT00940000167624	ENSGT00940000156286.h	ENSGT00510000047225.b	ENSGT00940000157869.e.a	ENSGT00390000013390	ENSGT00940000157238.b	ENSGT00950000182952.C.g.a	ENSGT00950000182846.a.a.a.a.a.a #22	ENSGT00390000003897 #23	ENSGT00940000153588.b #25	ENSGT00510000050141.b	ENSGT00940000158219.a	ENSGT00390000003937	ENSGT00940000165254.c.a	ENSGT00940000155445	ENSGT00390000001092	ENSGT00940000158549	ENSGT00940000155311.C.c	ENSGT00940000164248.b.b	ENSGT00940000153541.B	ENSGT00940000161969	ENSGT00940000159748	ENSGT00390000003093
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	589						ENSGT00530000063735.a.a.f	ENSGT00940000156550.b.d	ENSGT00940000158156.b.a.b.b	ENSGT00940000167624.a	ENSGT00940000156286.h	ENSGT00510000047225.b.c	ENSGT00940000157869.e.a.b	ENSGT00390000013390.h	ENSGT00940000157238.b.b	ENSGT00950000182952.C.g.a	ENSGT00950000182846.a.a.a.a.a.a.e #22	ENSGT00390000003897.r.a #23	ENSGT00940000153588.b.d.a #25	ENSGT00510000050141.b	ENSGT00940000158219.a.e	ENSGT00940000165254.c.a.b	ENSGT00940000155445.p	ENSGT00940000177826
Cyprininae_a	ANCESTRAL SPECIES	478						ENSGT00530000063735.a.a.f	ENSGT00940000156550.b.d	ENSGT00940000158156.b.a.b.b	ENSGT00940000167624.a	ENSGT00940000156286.h	ENSGT00510000047225.b.c	ENSGT00940000157869.e.a.b	ENSGT00390000013390.h	ENSGT00940000157238.b.b	ENSGT00950000182952.C.g.a	ENSGT00950000182846.a.a.a.a.a.a.e #22	ENSGT00390000003897.q #23	ENSGT00940000153588.b.d.a #25	ENSGT00940000158219.a.e	ENSGT00940000165254.c.a.b	ENSGT00940000155445.p	ENSGT00940000177826
Golden-line barbel	MODERN SPECIES	745	ENSSGRG00000025078	AMIGO3 (ENSSGRG00000025079)	ENSSGRG00000025080	ASB14 (ENSSGRG00000025082)	DNAH12 (ENSSGRG00000025083)	atp6ap1lb (ENSSGRG00000025084)	slmapb (ENSSGRG00000025085)	ENSSGRG00000025094	ENSSGRG00000025096	abhd6b (ENSSGRG00000025162)	kctd6b (ENSSGRG00000025164)	ENSSGRG00000025165	UQCC5 (ENSSGRG00000025166)	ognb (ENSSGRG00000025167)	ENSSGRG00000025168	dnase1l1 (ENSSGRG00000025170) #22	rpl10 (ENSSGRG00000025172) #23	FLNA (ENSSGRG00000025295) #25	emd (ENSSGRG00000026293)	ENSSGRG00000026295	atp2b3b (ENSSGRG00000026312)	ccnq (ENSSGRG00000027605)	ENSSGRG00000027606	B4GALT3 (ENSSGRG00000027607)	bgnb (ENSSGRG00000027608)
Common carp reference	MODERN SPECIES	49	ENSCCRG00000072060	apobec2b (ENSCCRG00000064901)	oard1 (ENSCCRG00000035378)	guca1b (ENSCCRG00000035363)	ENSCCRG00000062802	ENSCCRG00000082676	ENSCCRG00000068829	ENSCCRG00000042652	ENSCCRG00000045918	atp6ap1lb (ENSCCRG00000053962)	slmapb (ENSCCRG00000052523)	ENSCCRG00000065630	kctd6b (ENSCCRG00000020008)	ognb (ENSCCRG00000019953)	rpl10 (ENSCCRG00000019897) #23	dnase1l1 (ENSCCRG00000070827) #22	ENSCCRG00000019813 #25	ENSCCRG00000047282	atp2b3b (ENSCCRG00000076378)	cfap126 (ENSCCRG00000056218)	ENSCCRG00000082601	bgnb (ENSCCRG00000028406)	tnnc1b (ENSCCRG00000028410)	tktb (ENSCCRG00000058506)	lrrc23 (ENSCCRG00000028418)	ENSCCRG00000022493	lamb2 (ENSCCRG00000028242)	ENSCCRG00000077977	ENSCCRG00000074584	ENSCCRG00000079879	tnnc2.2 (ENSCCRG00000013128)
Goldfish	MODERN SPECIES	1522	ENSCARG00000040908	apobec2b (ENSCARG00000040921)	oard1 (ENSCARG00000040949)	guca1b (ENSCARG00000041110)	ENSCARG00000041142	AMIGO3 (ENSCARG00000041152)	ENSCARG00000041162	atp6ap1lb (ENSCARG00000041353)	slmapb (ENSCARG00000041378)	ENSCARG00000041475	abhd6b (ENSCARG00000041514)	kctd6b (ENSCARG00000041562)	UQCC5 (ENSCARG00000041568)	ognb (ENSCARG00000041586)	ENSCARG00000041602	dnase1l1 (ENSCARG00000041607) #22	rpl10 (ENSCARG00000041619) #23	FLNA (ENSCARG00000041697) #25	ENSCARG00000042587	ENSCARG00000042631	atp2b3b (ENSCARG00000042861)	ccnq (ENSCARG00000050111)	cfap126 (ENSCARG00000050124)	B4GALT3 (ENSCARG00000050153)	bgnb (ENSCARG00000050188)	tnnc1b (ENSCARG00000050269)	tktb (ENSCARG00000050352)	lrrc23 (ENSCARG00000051498)	ENSCARG00000051631	USP19 (ENSCARG00000051888)	lamb2 (ENSCARG00000058381)
Cyprininae	ANCESTRAL SPECIES	346	ENSGT00940000156616.j.b	ENSGT00390000006988	ENSGT00940000157530.a	ENSGT00940000167423.f	ENSGT00950000183146.b.a.b	ENSGT00950000183146.b.a.a	ENSGT00530000063735.a.a.e	ENSGT00940000156550.b.c	ENSGT00940000154280	ENSGT00940000158156.b.a.b.a	ENSGT00940000167624.b	ENSGT00510000047225.b.d	ENSGT00940000157869.e.a.a	ENSGT00390000013390.g	ENSGT00940000157238.b.a	ENSGT00950000182846.a.a.a.a.a.a.f #22	ENSGT00390000003897.r.b #23	ENSGT00940000153588.b.c #25	ENSGT00940000158219.a.f	ENSGT00390000003937	ENSGT00940000165254.c.a.a	ENSGT00940000155445.o	ENSGT00390000001092	ENSGT00940000158549.d	ENSGT00940000155311.C.c.b	ENSGT00940000153541.B.n	ENSGT00940000161969.n	ENSGT00940000159748	ENSGT00390000003093.a	ENSGT00940000159085.f	ENSGT00940000156060.bc
Cyprininae_a	ANCESTRAL SPECIES	69	ENSGT00940000156616.j.b	ENSGT00390000006988.w	ENSGT00940000157530.a	ENSGT00940000167423.f	ENSGT00950000183146.b.a.b	ENSGT00950000183146.b.a.a	ENSGT00530000063735.a.a.e	ENSGT00940000156550.b.c	ENSGT00940000154280	ENSGT00940000158156.b.a.b.a	ENSGT00940000167624.b	ENSGT00510000047225.b.d	ENSGT00940000157869.e.a.a	ENSGT00390000013390.g	ENSGT00940000157238.b.a	ENSGT00950000182846.a.a.a.a.a.a.f #22	ENSGT00390000003897.r.b #23	ENSGT00940000153588.b.c #25	ENSGT00510000050141.b	ENSGT00390000003937	ENSGT00940000165254.c.a.a	ENSGT00940000155445.o	ENSGT00390000001092	ENSGT00940000158549.d	ENSGT00940000155311.C.c.b	ENSGT00940000153541.B.n	ENSGT00940000161969.n	ENSGT00940000159748	ENSGT00390000003093.a	ENSGT00940000159085.f	ENSGT00940000156060.bc
Common carp reference	MODERN SPECIES	11	ccdc115 (ENSCCRG00000035386)	ebp (ENSCCRG00000054688)	ENSCCRG00000056677	apobec2b (ENSCCRG00000068211)	guca1b (ENSCCRG00000065316)	ENSCCRG00000082481	ENSCCRG00000037189	ENSCCRG00000042627	ENSCCRG00000053965	atp6ap1lb (ENSCCRG00000058532)	slmapb (ENSCCRG00000019872)	ognb (ENSCCRG00000082313)	ENSCCRG00000052516	kctd6b (ENSCCRG00000069972)	ENSCCRG00000067658	dnase1l1 (ENSCCRG00000078686) #22	rpl10 (ENSCCRG00000062618) #23	FLNA (ENSCCRG00000020242) #25	ENSCCRG00000047286	atp2b3b (ENSCCRG00000047309)	ccnq (ENSCCRG00000047331)	ENSCCRG00000077163	ENSCCRG00000028401	bgnb (ENSCCRG00000031186)	ENSCCRG00000081512	tnnc1b (ENSCCRG00000068464)	tktb (ENSCCRG00000054618)	ENSCCRG00000055450	ENSCCRG00000027995	lamb2 (ENSCCRG00000028239)	ENSCCRG00000026296
Golden-line barbel	MODERN SPECIES	1431					AMIGO3 (ENSSGRG00000022487)	ENSSGRG00000022489	ASB14 (ENSSGRG00000022490)	ASB14 (ENSSGRG00000022492)	atp6ap1lb (ENSSGRG00000022496)	slmapb (ENSSGRG00000022497)	abhd6b (ENSSGRG00000022498)	kctd6b (ENSSGRG00000022499)	ENSSGRG00000022500	ognb (ENSSGRG00000022501)	ENSSGRG00000022502	dnase1l1 (ENSSGRG00000022503) #22	rpl10 (ENSSGRG00000022509) #23	FLNA (ENSSGRG00000022657) #25	emd (ENSSGRG00000026973)	stx3b (ENSSGRG00000026976)
Goldfish	MODERN SPECIES	631	pard6b (ENSCARG00000066454)	ENSCARG00000066469	ccdc115 (ENSCARG00000066474)	ENSCARG00000066485	apobec2b (ENSCARG00000066494)	guca1b (ENSCARG00000066509)	ENSCARG00000066516	ENSCARG00000066538	ENSCARG00000066550	ASB14 (ENSCARG00000066660)	DNAH12 (ENSCARG00000066713)	atp6ap1lb (ENSCARG00000067932)	slmapb (ENSCARG00000067939)	kctd6b (ENSCARG00000067952)	UQCC5 (ENSCARG00000067954)	dnase1l1 (ENSCARG00000067973) #22	rpl10 (ENSCARG00000068047) #23	FLNA (ENSCARG00000068155) #25	ENSCARG00000069114	ENSCARG00000069131	atp2b3b (ENSCARG00000069189)	ENSCARG00000069373	ccnq (ENSCARG00000069377)	ENSCARG00000069383	B4GALT3 (ENSCARG00000069385)	bgnb (ENSCARG00000069390)	ENSCARG00000058455	tnnc1b (ENSCARG00000058473)	tktb (ENSCARG00000058524)	ENSCARG00000058934	USP19 (ENSCARG00000059252)
Zebrafish	MODERN SPECIES	15	oard1 (ENSDARG00000057426)	guca1b (ENSDARG00000013393)	ENSDARG00000090787	ENSDARG00000013346	ASB14 (ENSDARG00000087741)	DNAH12 (ENSDARG00000059987)	atp6ap1lb (ENSDARG00000090963)	slmapb (ENSDARG00000020764)	ENSDARG00000092281	abhd6b (ENSDARG00000070894)	ENSDARG00000115810	kctd6b (ENSDARG00000023703)	smim4 (ENSDARG00000089921)	ognb (ENSDARG00000031489)	ENSDARG00000092512	dnase1l1 (ENSDARG00000005464) #22	rpl10 (ENSDARG00000025581) #23	FLNA (ENSDARG00000074201) #25	emd (ENSDARG00000095774)	ENSDARG00000037432	atp2b3b (ENSDARG00000023445)	ccnq (ENSDARG00000037537)	cfap126 (ENSDARG00000070868)	B4GALT3 (ENSDARG00000062329)	bgnb (ENSDARG00000002945)	ENSDARG00000070857	tnnc1b (ENSDARG00000037539)	tktb (ENSDARG00000006019)	lrrc23 (ENSDARG00000006174)	ENSDARG00000092934	USP19 (ENSDARG00000004132)
Clupeiformes	DUPLICATION
Clupeiformes	ANCESTRAL SPECIES	103			ENSGT00390000013764	ENSGT00940000163461.b	ENSGT00950000183146.b.a	ENSGT00530000063735.a.a	ENSGT00940000156550.b	ENSGT00940000154280	ENSGT00940000158156.b.a.b	ENSGT00940000167624	ENSGT00510000047225.b	ENSGT00940000157869.e.a	ENSGT00390000013390	ENSGT00940000157238.b	ENSGT00950000182952.C.g.a	ENSGT00950000182846.a.a.a.a.a.a.g #22	ENSGT00390000003897 #23	ENSGT00940000153588.b #25	ENSGT00510000050141.b	ENSGT00940000158219.a	ENSGT00390000003937	ENSGT00940000165254.c.a	ENSGT00940000155445	ENSGT00390000001092	ENSGT00940000158549	ENSGT00940000155311.C.c	ENSGT00940000164248.b.b	ENSGT00940000153541.B	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369
Atlantic herring	MODERN SPECIES	20	samhd1 (ENSCHAG00000001845)	samhd1 (ENSCHAG00000002266)	samhd1 (ENSCHAG00000002379)	ENSCHAG00000004820	trpc4apb (ENSCHAG00000005024)	ENSCHAG00000006169	ASB14 (ENSCHAG00000006505)	DNAH12 (ENSCHAG00000006637)	atp6ap1lb (ENSCHAG00000010172)	slmapb (ENSCHAG00000010184)	abhd6b (ENSCHAG00000010230)	kctd6b (ENSCHAG00000010250)	ENSCHAG00000010277	ognb (ENSCHAG00000010302)	ENSCHAG00000010307	dnase1l1 (ENSCHAG00000010321) #22	rpl10 (ENSCHAG00000010458) #23	FLNA (ENSCHAG00000010701) #25	emd (ENSCHAG00000015028)	ENSCHAG00000015036	ENSCHAG00000015047	atp2b3b (ENSCHAG00000015111)	ccnq (ENSCHAG00000016458)	cfap126 (ENSCHAG00000016472)	B4GALT3 (ENSCHAG00000016537)	bgnb (ENSCHAG00000016565)	tnnc1b (ENSCHAG00000016584)	tktb (ENSCHAG00000016633)	lrrc23 (ENSCHAG00000017271)	RBM10 (ENSCHAG00000017390)	ENSCHAG00000017441
Denticle herring	MODERN SPECIES	1	LGR6 (ENSDCDG00000017890)	ENSDCDG00000017892	ADORA3 (ENSDCDG00000017893)	ENSDCDG00000017895	TEAD3 (ENSDCDG00000017900)	smpd2a (ENSDCDG00000018082)	ENSDCDG00000018087	tnnt2a (ENSDCDG00000018185)	ENSDCDG00000018197	DNAH12 (ENSDCDG00000018209)	slmapb (ENSDCDG00000018249)	kctd6b (ENSDCDG00000018255)	UQCC5 (ENSDCDG00000018257)	ENSDCDG00000018261	dnaaf4 (ENSDCDG00000018281)	dnase1l1 (ENSDCDG00000018302) #22	ENSDCDG00000018325	rpl10 (ENSDCDG00000018336) #23	FLNA (ENSDCDG00000018366) #25	emd (ENSDCDG00000018765)	ENSDCDG00000018773	atp2b3b (ENSDCDG00000018838)	ENSDCDG00000019865	ccnq (ENSDCDG00000019866)	ENSDCDG00000019867	B4GALT3 (ENSDCDG00000019870)	bgnb (ENSDCDG00000019871)	ENSDCDG00000002963	tnnc1b (ENSDCDG00000002988)	tktb (ENSDCDG00000003220)	lrrc23 (ENSDCDG00000003713)
Clupeiformes	ANCESTRAL SPECIES	21										ENSGT00940000165254.c.b	ENSGT00950000182846.a.a.a.a.b ##22	ENSGT00940000174958	ENSGT00940000154897.q	ENSGT00510000046470.a.a.b	ENSGT00950000183021.a.b.c	ENSGT00950000182846.a.a.a.a.a.a.h #22	ENSGT00940000156478	ENSGT00940000161109.p.a	ENSGT00390000007823	ENSGT00950000183029.C	ENSGT00940000159151	ENSGT00940000164502.a.a	ENSGT00940000156477.c	ENSGT00950000182872.f.a.a.a.a	ENSGT00940000159233	ENSGT00940000158422.b	ENSGT01070000253775.a.d.a.b.b.h.a	ENSGT00940000164714	ENSGT00390000014570.b	ENSGT00940000164203	ENSGT00940000157025
Atlantic herring	MODERN SPECIES	20	gid8a (ENSCHAG00000019272)	ENSCHAG00000019296	ythdf1 (ENSCHAG00000019306)	nkain5 (ENSCHAG00000019318)	si:dkey-70p6.1 (ENSCHAG00000019324)	uckl1a (ENSCHAG00000019345)	samd10a (ENSCHAG00000019743)	EMILIN3 (ENSCHAG00000019781)	si:ch211-229n2.6 (ENSCHAG00000019816)	dedd (ENSCHAG00000019829)	atp2b3a (ENSCHAG00000019863)	dnase1l1l (ENSCHAG00000020727) ##22	prkcbp1l (ENSCHAG00000020874)	zgc:113278 (ENSCHAG00000023938)	NCOA3 (ENSCHAG00000024119)	ENSCHAG00000024140 #22	hm13 (ENSCHAG00000024166)	ID1 (ENSCHAG00000024392)	mrgbp (ENSCHAG00000024401)	eef1a2 (ENSCHAG00000024407)	sulf2b (ENSCHAG00000024478)	ENSCHAG00000024718	ENSCHAG00000024730	phf20b (ENSCHAG00000024739)	ndrg3b (ENSCHAG00000024779)	sla2b (ENSCHAG00000024939)	edem2 (ENSCHAG00000024949)	ENSCHAG00000024987	ENSCHAG00000025079	ENSCHAG00000025279	p4htma (ENSCHAG00000025995)
Neopterygii	ANCESTRAL SPECIES																	ENSGT00950000182846.a.a.a.a.a.b #22
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00950000182846.a.a.a.a.a.b #22
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00950000182846.a.a.a.a.a.b #22
Euteleosteomorpha	ANCESTRAL SPECIES	224						ENSGT00940000154955.b	ENSGT00950000182989.D.a.a.b	ENSGT00530000063168.a.a.b	ENSGT00940000155170	ENSGT00600000085659.b	ENSGT00950000182835.c.c.g.a	ENSGT00940000164454	ENSGT00940000167069	ENSGT00390000018621 #20	ENSGT00940000156650.j #19	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00390000003897 #23	ENSGT00940000153588.b.f #25	ENSGT00510000050141.b	ENSGT00940000158219.a	ENSGT00390000003937	ENSGT00940000155445	ENSGT00390000001092	ENSGT00940000163962	ENSGT00940000167901	ENSGT00940000157025	ENSGT00390000000950.c.a	ENSGT00530000063808.a #10
Acanthomorphata	ANCESTRAL SPECIES	3	ENSGT00940000160528.b	ENSGT00940000158675.a	ENSGT00940000158313.a.b	ENSGT00940000154955.b	ENSGT01050000244882.b.c.b.b #37	ENSGT00950000182989.D.a.a.b	ENSGT00530000063168.a.a.b	ENSGT00940000155170	ENSGT00600000085659.b	ENSGT00940000157506.f	ENSGT00950000182835.c.c.g.a	ENSGT00940000164454	ENSGT00940000167069	ENSGT00390000018621 #20	ENSGT00940000156650.j #19	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00390000003897 #23	ENSGT00940000153588.b.f #25	ENSGT00510000050141.b	ENSGT00940000158219.a	ENSGT00390000003937	ENSGT00390000014785	ENSGT00940000155445	ENSGT00390000001092	ENSGT00940000163962	ENSGT00940000167901	ENSGT00940000157025	ENSGT00390000000950.c.a	ENSGT00530000063808.a #10	ENSGT00940000159012	ENSGT00390000004928
Euacanthomorphacea	ANCESTRAL SPECIES	2	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT01060000248869	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00940000154285.a.a.c.b.b.b	ENSGT00940000156650.j #19	ENSGT00390000018621 #20	ENSGT00940000167069	ENSGT00940000164454	ENSGT00950000182835.c.c.g.a	ENSGT00940000157506.f	ENSGT00600000085659.b	ENSGT00940000155170	ENSGT00530000063168.a.a.b	ENSGT00950000182989.D.a.a.b	ENSGT01050000244882.b.c.b.b #37	ENSGT00940000154955.b	ENSGT00940000158313.a.b	ENSGT00940000158675.a
Percomorphaceae	ANCESTRAL SPECIES	25	ENSGT00530000063808.a #10	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00940000154285.a.a.c.b.b.b	ENSGT00950000183126.a.p.a	ENSGT00950000183126.a.p.b	ENSGT00940000153497.A	ENSGT00940000160546	ENSGT00940000163942.b	ENSGT00940000158374.c	ENSGT00510000048446	ENSGT00390000013740 #34	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d
Tiger tail seahorse	MODERN SPECIES	404	sephs3 (ENSHCOG00000014621)	ap4b1 (ENSHCOG00000014600)	zgc:101663 (ENSHCOG00000014574)	cfap126 (ENSHCOG00000014569)	ccnq (ENSHCOG00000014564)	atp2b3b (ENSHCOG00000014556)	ENSHCOG00000014516	ENSHCOG00000014504	ENSHCOG00000014496	NINJ1 (ENSHCOG00000014486)	emd (ENSHCOG00000014478)	ENSHCOG00000014471 #25	ENSHCOG00000014442 #25	rpl10 (ENSHCOG00000014435) #23	ENSHCOG00000014425	ENSHCOG00000014408 #22	ENSHCOG00000014403	prkcz (ENSHCOG00000014393)	skia (ENSHCOG00000014360)	skia (ENSHCOG00000014355)	si:ch211-251b21.1 (ENSHCOG00000014345)	PLCH2 (ENSHCOG00000014342)	pex10 (ENSHCOG00000014307)	renbp (ENSHCOG00000014303) #34	ENSHCOG00000014272	dennd2da (ENSHCOG00000014260)	stk38a (ENSHCOG00000014243)	MTCH1 (ENSHCOG00000000398)	stk35 (ENSHCOG00000000396)	pdyn (ENSHCOG00000014163)	GMEB2 (ENSHCOG00000014151)
Percomorphaceae_B	ANCESTRAL SPECIES	6	ENSGT00530000063808.a #10	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a	ENSGT00950000183126.a.p.b	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546	ENSGT00940000163942.b	ENSGT00940000158374.c	ENSGT00510000048446	ENSGT00390000013740 #34	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d
Ovalentaria	ANCESTRAL SPECIES	6	ENSGT00530000063808.a #10	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a	ENSGT00950000183126.a.p.b	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546	ENSGT00940000163942.b	ENSGT00940000158374.c	ENSGT00510000048446	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742	ENSGT00390000017353	ENSGT00390000013740 #34
Ovalentaria_B	ANCESTRAL SPECIES	2	ENSGT00530000063808.a #10	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546	ENSGT00940000163942.b	ENSGT00940000158374.c	ENSGT00510000048446	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742	ENSGT00390000017353	ENSGT00390000013740 #34
Cichlidae	ANCESTRAL SPECIES		ENSGT00530000063808.a #10	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00940000158219.a	ENSGT00390000017253	ENSGT00510000050141.b	ENSGT00940000153588.b.f #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00940000154285.a.a.c.b.b.b.b	ENSGT00940000153497.A	ENSGT00940000160546	ENSGT00940000163942.b	ENSGT00940000158374.c	ENSGT00510000048446	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742	ENSGT00390000017353	ENSGT00390000013740 #34
Pseudocrenilabrinae	ANCESTRAL SPECIES	5	ENSGT00530000063808.a #10	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00940000180535	ENSGT00390000014785	ENSGT00390000003937	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00940000154285.a.a.c.b.b.b.b	ENSGT00940000153497.A	ENSGT00940000160546	ENSGT00940000163942.b	ENSGT00940000158374.c	ENSGT00510000048446	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742	ENSGT00390000017353	ENSGT00390000013740 #34	ENSGT00940000154513.B	ENSGT00940000154513.A	ENSGT00530000065390	ENSGT00940000159291
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	17										ENSGT00940000180535	ENSGT00390000014785.j	ENSGT00390000014785.i.b	ENSGT00510000050141.b	ENSGT00940000153588.b.f #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00940000154285.a.a.c.b.b.b.b	ENSGT00940000153497.A	ENSGT00940000160546	ENSGT00940000163942.b	ENSGT00940000158374.c	ENSGT00510000048446	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742	ENSGT00390000017353	ENSGT00390000013740 #34	ENSGT00940000169392	ENSGT00940000154513.B	ENSGT00940000154513.A	ENSGT00530000065390
Haplochromini	ANCESTRAL SPECIES	18									ENSGT00390000003937	ENSGT00940000158892.b.j	ENSGT00390000014785.j	ENSGT00390000014785.i.b	ENSGT00510000050141.b	ENSGT00940000153588.b.f.p.b #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00940000154285.a.a.c.b.b.b.b	ENSGT00940000153497.A	ENSGT00940000160546	ENSGT00940000163942.b	ENSGT00940000158374.c	ENSGT00510000048446	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742	ENSGT00390000017353	ENSGT00390000013740 #34	ENSGT00940000169392	ENSGT00940000154513.B	ENSGT00940000154513.A	ENSGT00530000065390
Burton s mouthbrooder	MODERN SPECIES	293									NINJ1 (ENSHBUG00000002131)	ENSHBUG00000002121	las1l (ENSHBUG00000002119)	emd (ENSHBUG00000002115)	FLNA (ENSHBUG00000002102) #25	ENSHBUG00000002080 #25	rpl10 (ENSHBUG00000002074) #23	ENSHBUG00000000026 #22	ENSHBUG00000002043	prkcz (ENSHBUG00000002024)	skia (ENSHBUG00000001993)	ENSHBUG00000001981	ENSHBUG00000001971	ENSHBUG00000001966	snx16 (ENSHBUG00000001957)	ENSHBUG00000001943	WWP1 (ENSHBUG00000001933)	rmdn1 (ENSHBUG00000001901)	cpne3 (ENSHBUG00000001884)	cpne3 (ENSHBUG00000001864)	cpne3 (ENSHBUG00000001827)	idi1 (ENSHBUG00000001793)	wdr37 (ENSHBUG00000001775)
Haplochromini_A	ANCESTRAL SPECIES	36							ENSGT00940000157890.x.a	ENSGT00390000003937	ENSGT00940000158892.b.j	ENSGT00390000014785.j	ENSGT00390000014785.i.b	ENSGT00940000177283.b	ENSGT00510000050141.b	ENSGT00940000153588.b.f.p.b #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00940000154285.a.a.c.b.b.b.b	ENSGT00940000153497.A	ENSGT00940000160546	ENSGT00950000182912.b.b.d.a.a.g.a.b.b	ENSGT00940000163942.b	ENSGT00940000158374.c	ENSGT00510000048446	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742	ENSGT00390000017353	ENSGT00390000013740 #34	ENSGT00940000169392	ENSGT00940000154513.A	ENSGT00530000065390
P. nyererei	MODERN SPECIES	645							ENSPNYG00000024089	ENSPNYG00000024092	NINJ1 (ENSPNYG00000024095)	ENSPNYG00000024097	ENSPNYG00000024099	FLNA (ENSPNYG00000024101) #25	ENSPNYG00000024102 #25	ENSPNYG00000024104 #25	rpl10 (ENSPNYG00000024106) #23	ENSPNYG00000024108 #22	ENSPNYG00000024109	prkcz (ENSPNYG00000024110)	skia (ENSPNYG00000024111)	ENSPNYG00000024112	ENSPNYG00000024113
Haplochromini_B	DUPLICATION
Haplochromini_B	ANCESTRAL SPECIES	66									ENSGT00940000157890.x.a	ENSGT00390000003937	ENSGT00940000158892.b.j	ENSGT00390000014785.j.b	ENSGT00940000177283.b	ENSGT00510000050141.b	ENSGT00940000153588.b.f.p.b #25	ENSGT00950000182846.a.a.a.a.a.b.a #22	ENSGT00940000154285.a.a.c.b.b.b.b	ENSGT00940000153497.A	ENSGT00940000160546	ENSGT00950000182912.b.b.d.a.a.g.a.b.b.b	ENSGT00940000163942.b	ENSGT00940000158374.c	ENSGT00510000048446	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742	ENSGT00390000017353	ENSGT00390000013740 #34	ENSGT01000000214743.A.a.b	ENSGT00940000169392	ENSGT00940000154513.A
Eastern happy	MODERN SPECIES	12	ENSACLG00000000055	ENSACLG00000000120	ENSACLG00000000146	ENSACLG00000000230	ENSACLG00000000246	ENSACLG00000000285	ENSACLG00000000326	NINJ1 (ENSACLG00000000345)	ENSACLG00000000371	ENSACLG00000000381	ENSACLG00000000397	ENSACLG00000000407	FLNA (ENSACLG00000000418) #25	ENSACLG00000000468 #25	rpl10 (ENSACLG00000000472) #23	ENSACLG00000000516 #22	ENSACLG00000000552	prkcz (ENSACLG00000000608)	skia (ENSACLG00000000770)	ENSACLG00000000903	ENSACLG00000000906	ENSACLG00000000918	ENSACLG00000000930	si:ch211-251b21.1 (ENSACLG00000000992)	plch2a (ENSACLG00000001058)	pex10 (ENSACLG00000001141)	stk38a (ENSACLG00000001153)	dennd2da (ENSACLG00000001295)	ENSACLG00000001343	ENSACLG00000001365	renbp (ENSACLG00000001385) #34
Zebra mbuna	MODERN SPECIES	1103	CSRNP2 (ENSMZEG00005026508)	itga5 (ENSMZEG00005026510)	RAPGEF3 (ENSMZEG00005026513)	slc48a1a (ENSMZEG00005026515)	SLC26A9 (ENSMZEG00005026517)	PLXNA2 (ENSMZEG00005026519) ##16	ENSMZEG00005026521	ENSMZEG00005026522	NINJ1 (ENSMZEG00005026523)	ENSMZEG00005026525	las1l (ENSMZEG00005026527)	emd (ENSMZEG00005026528)	FLNA (ENSMZEG00005026529) #25	ENSMZEG00005026531 #25	rpl10 (ENSMZEG00005026532) #23	ENSMZEG00005026535 #22	ENSMZEG00005026537	prpf6 (ENSMZEG00005026539)	aar2 (ENSMZEG00005026542)	EMILIN3 (ENSMZEG00005026544)	b4galt5 (ENSMZEG00005026546)	slc9a8 (ENSMZEG00005026549)	ENSMZEG00005026552	opn7b (ENSMZEG00005026553)	spata2 (ENSMZEG00005026554)	rnf114 (ENSMZEG00005026556)	mafba (ENSMZEG00005026558)	dhx35 (ENSMZEG00005026563)	rab5if (ENSMZEG00005026571)	zhx3b (ENSMZEG00005026573)	plcg1 (ENSMZEG00005026576)
Haplochromini_B	ANCESTRAL SPECIES	184														ENSGT00940000153588.b.f.p.a #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b.b #22
Zebra mbuna	MODERN SPECIES	134															rpl10 (ENSMZEG00005028041) #23	ENSMZEG00005028042 #22	ENSMZEG00005028043	prkcz (ENSMZEG00005028044)	ENSMZEG00005028045	skia (ENSMZEG00005028046)
Lyretail cichlid	MODERN SPECIES	409					ENSNBRG00000003713	ENSNBRG00000003871	ENSNBRG00000004044	ENSNBRG00000004062	ENSNBRG00000004074	las1l (ENSNBRG00000004084)	ENSNBRG00000004096	FLNA (ENSNBRG00000004116) #25	ENSNBRG00000004157 #25	ENSNBRG00000004180 #25	rpl10 (ENSNBRG00000004192) #23	ENSNBRG00000004235 #22	ENSNBRG00000004247	prkcz (ENSNBRG00000004258)	skia (ENSNBRG00000004307)	ENSNBRG00000004335	si:ch211-251b21.1 (ENSNBRG00000004343)	plch2a (ENSNBRG00000004374)	pex10 (ENSNBRG00000004436)	stk38a (ENSNBRG00000004493)	dennd2da (ENSNBRG00000004527)	ENSNBRG00000004553	ENSNBRG00000004575	renbp (ENSNBRG00000004592) #34	ENSNBRG00000004626	ENSNBRG00000004638	nppal (ENSNBRG00000004679)
Nile tilapia	MODERN SPECIES	12	ccnq (ENSONIG00000042165)	ENSONIG00000039111	atp2b3b (ENSONIG00000000543)	ENSONIG00000020925	ENSONIG00000041123	ENSONIG00000040596	ENSONIG00000032046	ENSONIG00000034486	las1l (ENSONIG00000027526)	ENSONIG00000006509	ENSONIG00000006508	ENSONIG00000041373	ENSONIG00000017913	FLNA (ENSONIG00000017914) #25	rpl10 (ENSONIG00000036559) #23	ENSONIG00000017926 #22	ENSONIG00000018996	prkcz (ENSONIG00000017929)	ENSONIG00000035402	skia (ENSONIG00000017935)	ENSONIG00000038805	ENSONIG00000029924	ENSONIG00000009069	ENSONIG00000015971	ENSONIG00000014407	ENSONIG00000032480	ENSONIG00000015140	ENSONIG00000029256	VPS13D (ENSONIG00000017312)	ENSONIG00000040422	igsf21b (ENSONIG00000017309)
Midas cichlid	MODERN SPECIES	240	ikbkg (ENSACIG00000006391) #10	sephs3 (ENSACIG00000006270)	ap4b1 (ENSACIG00000006226)	zgc:101663 (ENSACIG00000006214)	ENSACIG00000006193	ccnq (ENSACIG00000006177)	atp2b3a (ENSACIG00000006132)	ENSACIG00000006125	ENSACIG00000006110	ENSACIG00000006090	las1l (ENSACIG00000006086)	MRPL49 (ENSACIG00000006080)	ENSACIG00000006072	FLNA (ENSACIG00000005973) #25	rpl10 (ENSACIG00000005751) #23	ENSACIG00000005566 #22	ENSACIG00000005440	prkcz (ENSACIG00000005397)	skia (ENSACIG00000005375)
Pomacentridae	ANCESTRAL SPECIES	91	ENSGT00530000063808.a #10	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a
Pomacentridae_A	ANCESTRAL SPECIES	90	ENSGT00530000063808.a #10	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.r
Amphiprion	ANCESTRAL SPECIES	75	ENSGT00530000063808.a #10	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.r	ENSGT00940000153394.c.a	ENSGT00940000166296	ENSGT00940000163299.A.b.c.a.b	ENSGT00940000164042.b	ENSGT00940000167423	ENSGT00390000003093	ENSGT00940000159085	ENSGT00940000178820	ENSGT00940000167093	ENSGT00940000165924	ENSGT00920000149641	ENSGT00940000153541.C.a.a	ENSGT00940000153541.C.a.b	ENSGT00390000012981
Orange clownfish	MODERN SPECIES	22	sephs3 (ENSAPEG00000017499)	ap4b1 (ENSAPEG00000017536)	zgc:101663 (ENSAPEG00000017560)	cfap126 (ENSAPEG00000017570)	ccnq (ENSAPEG00000017577)	atp2b3b (ENSAPEG00000017617)	ENSAPEG00000017698	ENSAPEG00000017704	las1l (ENSAPEG00000017716)	ENSAPEG00000017725	MRPL49 (ENSAPEG00000017747)	ENSAPEG00000017751	emd (ENSAPEG00000017765)	FLNA (ENSAPEG00000017783) #25	rpl10 (ENSAPEG00000017924) #23	ENSAPEG00000017962 #22	ENSAPEG00000018070	pim1 (ENSAPEG00000018085)	ENSAPEG00000018124	ENSAPEG00000018207	ENSAPEG00000018249	ENSAPEG00000018286	ENSAPEG00000018292	USP19 (ENSAPEG00000018313)	ENSAPEG00000018414	lamb2 (ENSAPEG00000018433)	ENSAPEG00000018585	ENSAPEG00000018608	ENSAPEG00000018623	TNNC2 (ENSAPEG00000018641)	tnnc2.2 (ENSAPEG00000018661)
Clown anemonefish	MODERN SPECIES	3649						atp2b3a (ENSAOCG00000018660)	ENSAOCG00000018692	ENSAOCG00000018705	las1l (ENSAOCG00000018717)	ENSAOCG00000018763	MRPL49 (ENSAOCG00000018785)	ENSAOCG00000018797	emd (ENSAOCG00000018813)	FLNA (ENSAOCG00000018939) #25	rpl10 (ENSAOCG00000018987) #23	ENSAOCG00000019015 #22	ENSAOCG00000019034	pim1 (ENSAOCG00000019060)
Spiny chromis	MODERN SPECIES	2212														ENSAPOG00000008218 #25	rpl10 (ENSAPOG00000000217) #23	ENSAPOG00000008146 #22
Bicolor damselfish	MODERN SPECIES	1499								ENSSPAG00000000285	las1l (ENSSPAG00000000289)	ENSSPAG00000000294	MRPL49 (ENSSPAG00000000302)	ENSSPAG00000000313	emd (ENSSPAG00000000322)	FLNA (ENSSPAG00000000341) #25	rpl10 (ENSSPAG00000000497) #23	ENSSPAG00000000543 #22	ENSSPAG00000000560
Atherinomorphae	ANCESTRAL SPECIES	3	ENSGT00530000063808.a #10	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00940000177283	ENSGT00940000153588.b.f #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a	ENSGT00950000183126.a.p.b	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546	ENSGT00940000163942.b	ENSGT00940000158374.c	ENSGT00510000048446	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742	ENSGT00390000013740 #34
Cyprinodontiformes	ANCESTRAL SPECIES	4	ENSGT00530000063808.a #10	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00940000177283	ENSGT00940000153588.b.f #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a	ENSGT00950000183126.a.p.b	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546	ENSGT00940000163942.b	ENSGT00940000158374.c	ENSGT00510000048446	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742	ENSGT00390000013740 #34	ENSGT00950000182970.A.b	ENSGT00390000017394	ENSGT00940000153314.b.a.a
Cyprinodontoidei	ANCESTRAL SPECIES	3	ENSGT00530000063808.a #10	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00940000177283	ENSGT00940000153588.b.f #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22
NAME_4	ANCESTRAL SPECIES	145	ENSGT00940000159012	ENSGT00530000063808.a #10	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00940000153588.b.f #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00390000013727.c	ENSGT00940000164771.b	ENSGT00520000055578.a.a.c	ENSGT00940000156364.a.b	ENSGT01030000234564.a.a.b.a.e	ENSGT00940000160063.h	ENSGT00940000165955	ENSGT00940000156759.a.a
Mummichog	MODERN SPECIES	2388	ikbkg (ENSFHEG00000011981) #10	sephs3 (ENSFHEG00000011966)	ap4b1 (ENSFHEG00000011950)	zgc:101663 (ENSFHEG00000011842)	ENSFHEG00000011830	ccnq (ENSFHEG00000011744)	atp2b3a (ENSFHEG00000011723)	ENSFHEG00000011644	las1l (ENSFHEG00000011634)	ENSFHEG00000011629	MRPL49 (ENSFHEG00000011616)	ENSFHEG00000011598	ENSFHEG00000011586	FLNA (ENSFHEG00000011525) #25	rpl10 (ENSFHEG00000011386) #23	ENSFHEG00000011348 #22	mfn2 (ENSFHEG00000011338)	ENSFHEG00000011280	asxl1 (ENSFHEG00000011274)	ENSFHEG00000011262	porcnl (ENSFHEG00000011220)	suv39h1b (ENSFHEG00000011212)
Sheepshead minnow	MODERN SPECIES	931					atp2b3b (ENSCVAG00000011739)	ENSCVAG00000011593	ENSCVAG00000011585	las1l (ENSCVAG00000011579)	ENSCVAG00000011568	MRPL49 (ENSCVAG00000011562)	ENSCVAG00000011559	ENSCVAG00000011555 #25	FLNA (ENSCVAG00000011537) #25	ENSCVAG00000011434 #25	rpl10 (ENSCVAG00000011424) #23	ENSCVAG00000011391 #22	mfn2 (ENSCVAG00000011379)	ENSCVAG00000011366	ENSCVAG00000011364	asxl1 (ENSCVAG00000011346)	ENSCVAG00000011340
Poeciliinae	ANCESTRAL SPECIES	2	ENSGT00940000157025	ENSGT00940000167901	ENSGT00940000177826	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00950000183126.a.p.a.f	ENSGT01060000248869	ENSGT00390000017253	ENSGT00390000003937	ENSGT00940000158219.a	ENSGT00940000177283	ENSGT00940000153588.b.f #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00390000013740 #34	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00510000048446	ENSGT00940000158374.c	ENSGT00940000163942.b	ENSGT00940000160546	ENSGT00610000087015	ENSGT00940000153497.A	ENSGT00950000183126.a.p.b	ENSGT00940000156759.a.a	ENSGT00940000165955	ENSGT00940000160063.h	ENSGT01030000234564.a.a.b.a.e
Poecilia	ANCESTRAL SPECIES	26	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00950000183126.a.p.a.f	ENSGT01060000248869	ENSGT00390000017253	ENSGT00390000003937	ENSGT00940000158219.a	ENSGT00940000177283	ENSGT00940000153588.b.f #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00390000013740 #34	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00510000048446	ENSGT00940000158374.c	ENSGT00940000163942.b	ENSGT00940000160546	ENSGT00610000087015	ENSGT00940000153497.A	ENSGT00950000183126.a.p.b	ENSGT00940000156759.a.a	ENSGT00940000165955	ENSGT00940000160063.h	ENSGT01030000234564.a.a.b.a.e
NAME_6	ANCESTRAL SPECIES	325										ENSGT00390000017253.s	ENSGT00390000003937	ENSGT00940000158219.a	ENSGT00940000177283	ENSGT00940000153588.b.f #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00390000013740 #34	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00510000048446	ENSGT00940000158374.c	ENSGT00940000163942.b
Amazon molly	MODERN SPECIES	671									ENSPFOG00000002080	ENSPFOG00000024505	MRPL49 (ENSPFOG00000020078)	ENSPFOG00000023117	ENSPFOG00000002069	FLNA (ENSPFOG00000001616) #25	rpl10 (ENSPFOG00000001344) #23	ENSPFOG00000001229 #22	renbp (ENSPFOG00000001025) #34	ENSPFOG00000022079	dennd2da (ENSPFOG00000000852)	stk38a (ENSPFOG00000000692)	pex10 (ENSPFOG00000000648)	plch2a (ENSPFOG00000000513)	si:ch211-251b21.1 (ENSPFOG00000022127)
Sailfin molly	MODERN SPECIES	350	ENSPLAG00000017318	slc7a4 (ENSPLAG00000017330)	ENSPLAG00000017350	RICTOR (ENSPLAG00000017414)	NPC1L1 (ENSPLAG00000017477)	nono (ENSPLAG00000017492)	ENSPLAG00000017516	ENSPLAG00000017603	ENSPLAG00000000549	MRPL49 (ENSPLAG00000017623)	ENSPLAG00000017631	ENSPLAG00000017642	FLNA (ENSPLAG00000000405) #25	ENSPLAG00000017689 #25	rpl10 (ENSPLAG00000017727) #23	ENSPLAG00000017756 #22	renbp (ENSPLAG00000017773) #34	ENSPLAG00000017788	dennd2da (ENSPLAG00000017799)	stk38a (ENSPLAG00000017852)	pex10 (ENSPLAG00000017861)
Guppy	MODERN SPECIES	459	ikbkg (ENSPREG00000005446) #10	sephs3 (ENSPREG00000005490)	ap4b1 (ENSPREG00000005512)	zgc:101663 (ENSPREG00000005542)	ccnq (ENSPREG00000005567)	atp2b3a (ENSPREG00000005594)	ENSPREG00000005646	ENSPREG00000005650	ENSPREG00000005656	ENSPREG00000005673	ENSPREG00000005714	MRPL49 (ENSPREG00000005735)	ENSPREG00000005751	FLNA (ENSPREG00000005812) #25	rpl10 (ENSPREG00000006075) #23	ENSPREG00000006157 #22	renbp (ENSPREG00000006197) #34	ENSPREG00000006243	dennd2da (ENSPREG00000006264)	stk38a (ENSPREG00000006334)	pex10 (ENSPREG00000006359)	plch2a (ENSPREG00000006383)	si:ch211-251b21.1 (ENSPREG00000006446)	skia (ENSPREG00000006492)	prkcz (ENSPREG00000006532)	ENSPREG00000006611	ENSPREG00000006872	ENSPREG00000008246	suv39h1b (ENSPREG00000008274)	porcnl (ENSPREG00000008284)	ENSPREG00000008330
Platyfish	MODERN SPECIES		rcc2 (ENSXMAG00000004563)	rpl22 (ENSXMAG00000004585)	icmt (ENSXMAG00000021941)	rtel1 (ENSXMAG00000004603)	mfn2 (ENSXMAG00000004637)	ENSXMAG00000019757	ENSXMAG00000024079	asxl1 (ENSXMAG00000013501)	ENSXMAG00000029599	ENSXMAG00000004661	MRPL49 (ENSXMAG00000024309)	ENSXMAG00000004664	ENSXMAG00000029296	FLNA (ENSXMAG00000004665) #25	rpl10 (ENSXMAG00000004788) #23	ENSXMAG00000004811 #22	renbp (ENSXMAG00000004821) #34	ENSXMAG00000004838	dennd2da (ENSXMAG00000004839)	stk38a (ENSXMAG00000004852)	pex10 (ENSXMAG00000004872)	plch2a (ENSXMAG00000027549)	ENSXMAG00000024198	ENSXMAG00000021223	si:ch211-251b21.1 (ENSXMAG00000001997)	skia (ENSXMAG00000002008)	prkcz (ENSXMAG00000002016)	ENSXMAG00000002044	PAX7 (ENSXMAG00000012884)	ENSXMAG00000012880	suv39h1b (ENSXMAG00000012872)
Aplocheiloidei	ANCESTRAL SPECIES	60	ENSGT00510000046985.o	ENSGT00390000004928	ENSGT00940000159012	ENSGT00530000063808.a #10	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00940000177826	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000003937	ENSGT00390000017253	ENSGT00390000014785	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a	ENSGT00950000183126.a.p.b	ENSGT00940000153497.A	ENSGT00940000160546	ENSGT00940000163942.b	ENSGT00940000158374.c	ENSGT00510000048446	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT00990000203742	ENSGT00390000013740 #34	ENSGT00950000182970.A.b	ENSGT00390000017394	ENSGT00940000153314.b.a.a	ENSGT00940000156151
Turquoise killifish	MODERN SPECIES	1624	IKBKG (ENSNFUG00015009699) #10	sephs3 (ENSNFUG00015009650)	AP4B1 (ENSNFUG00015009549)	zgc:101663 (ENSNFUG00015009535)	C23H1ORF192 (ENSNFUG00015009521)	ccnq (ENSNFUG00015009510)	atp2b3a (ENSNFUG00015009145)	ENSNFUG00015008985	ENSNFUG00015008976	BX248510.1 (ENSNFUG00015008960)	HAUS7 (ENSNFUG00015008930)	ENSNFUG00015008904	ENSNFUG00015008882	ENSNFUG00015008357	RPL10 (ENSNFUG00015008333) #23	ENSNFUG00015008321 #22	ENSNFUG00015008308	zgc:153759 (ENSNFUG00015008302)	ENSNFUG00015008286	ENSNFUG00015008276	ENSNFUG00015008275	prkcz (ENSNFUG00015008150)	SKIA (ENSNFUG00015008099)	si:ch211-251b21.1 (ENSNFUG00015008082)	plch2a (ENSNFUG00015007480)	pex10 (ENSNFUG00015007385)	DENND2DA (ENSNFUG00015007318)	ENSNFUG00015007305	renbp (ENSNFUG00015007140) #34	ENSNFUG00015007129	RTEL1 (ENSNFUG00015007055)
Oryzias	ANCESTRAL SPECIES	4	ENSGT00530000063808.a #10	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a.b	ENSGT00940000158219.a.a	ENSGT00940000153588.b.f #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00940000153769.G	ENSGT00940000153481.B	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641	ENSGT00940000165924	ENSGT00940000167093.c	ENSGT00940000156060	ENSGT00940000159085.j
Oryzias_a	ANCESTRAL SPECIES		ENSGT00530000063808.a #10	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a.b	ENSGT00940000158219.a.a	ENSGT00940000153588.b.f #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00940000153769.G	ENSGT00940000153481.B	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00390000012981.c	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641	ENSGT00940000165924	ENSGT00940000167093.c	ENSGT00940000156060	ENSGT00940000159085.j
Japanese Medaka HdrR	MODERN SPECIES	21	tmed4 (ENSORLG00000002130)	ikbkg (ENSORLG00000002119) #10	sephs3 (ENSORLG00000002099)	ap4b1 (ENSORLG00000002087)	ENSORLG00000022948	cfap126 (ENSORLG00000024577)	ccnq (ENSORLG00000002052)	atp2b3b (ENSORLG00000002042)	las1l (ENSORLG00000002014)	ENSORLG00000002009	MRPL49 (ENSORLG00000001995)	ENSORLG00000026330	ENSORLG00000025262	FLNA (ENSORLG00000001982) #25	rpl10 (ENSORLG00000027642) #23	ENSORLG00000001957 #22	ENSORLG00000001946	dpm1 (ENSORLG00000001880)	adnpb (ENSORLG00000001864)	pard6b (ENSORLG00000001861)	ARFGEF2 (ENSORLG00000001855)	bcl2l1 (ENSORLG00000025151)	cox4i2 (ENSORLG00000001813)	taf13 (ENSORLG00000023250)	tnnc2.2 (ENSORLG00000001797)	ENSORLG00000001761	ENSORLG00000001750	ENSORLG00000001709	lamb2 (ENSORLG00000028202)	USP19 (ENSORLG00000001685)	ENSORLG00000026988
Chinese medaka	MODERN SPECIES	230	ENSOSIG00000018354	snrpg (ENSOSIG00000018352)	plpbp (ENSOSIG00000018345)	tmed4 (ENSOSIG00000018338)	ikbkg (ENSOSIG00000018324) #10	sephs3 (ENSOSIG00000018314)	ap4b1 (ENSOSIG00000018299)	zgc:101663 (ENSOSIG00000018293)	ccnq (ENSOSIG00000018287)	atp2b3a (ENSOSIG00000015495)	ENSOSIG00000015454	las1l (ENSOSIG00000015453)	MRPL49 (ENSOSIG00000015452)	ENSOSIG00000015451	rpl10 (ENSOSIG00000015146) #23	ENSOSIG00000015136 #22	tpt1 (ENSOSIG00000015135)	dpm1 (ENSOSIG00000015109)	adnpb (ENSOSIG00000015104)	bcl2l1 (ENSOSIG00000015055)	cox4i2 (ENSOSIG00000015054)	taf13 (ENSOSIG00000015052)	tnnc2.2 (ENSOSIG00000015050)	TNNC2 (ENSOSIG00000015048)	ENSOSIG00000015047	ENSOSIG00000015045	ENSOSIG00000014427	ENSOSIG00000014142	ENSOSIG00000014138	ENSOSIG00000014134	ENSOSIG00000014130
Oryzias_b	ANCESTRAL SPECIES	2	ENSGT00940000159085.j	ENSGT00940000156060	ENSGT00940000167093.c	ENSGT00940000167093.d	ENSGT00940000165924	ENSGT00940000153541.C.a.a	ENSGT00940000153541.C.a.b	ENSGT00390000012981	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00390000003897 #23	ENSGT00940000153588.b.f #25	ENSGT00940000158219.a.a	ENSGT00940000158219.a.b	ENSGT00390000017253	ENSGT00390000003937	ENSGT00390000014785	ENSGT00390000016589	ENSGT00940000165254.d	ENSGT00940000155445	ENSGT00390000001092	ENSGT00940000167901	ENSGT00940000157025	ENSGT00390000000950.c.a	ENSGT00530000063808.a #10
Indian medaka	MODERN SPECIES	23	ENSOMEG00000000316	lamb2 (ENSOMEG00000012499)	ENSOMEG00000012451	ENSOMEG00000012293	ENSOMEG00000012276	TNNC2 (ENSOMEG00000000307)	tnnc2.2 (ENSOMEG00000012226)	ENSOMEG00000012200	cox4i2 (ENSOMEG00000012194)	bcl2l1 (ENSOMEG00000012180)	ARFGEF2 (ENSOMEG00000000298)	pard6b (ENSOMEG00000012068)	adnpb (ENSOMEG00000012049)	dpm1 (ENSOMEG00000012029)	ENSOMEG00000011954	DNASE1L1 (ENSOMEG00000011761) #22	rpl10 (ENSOMEG00000011751) #23	ENSOMEG00000011697 #25	ENSOMEG00000011678 #25	FLNA (ENSOMEG00000011643) #25	ENSOMEG00000011611	ano2b (ENSOMEG00000011567)	ENSOMEG00000011429	ENSOMEG00000011420	ENSOMEG00000011377	ENSOMEG00000011215	ENSOMEG00000011190	MRPL49 (ENSOMEG00000011162)	las1l (ENSOMEG00000011147)	ENSOMEG00000011140	atp2b3a (ENSOMEG00000011092)
Javanese ricefish	MODERN SPECIES	21	ENSOJAG00000021682	ENSOJAG00000021697	USP19 (ENSOJAG00000021704)	lamb2 (ENSOJAG00000021744)	ENSOJAG00000022697	ENSOJAG00000023020	ENSOJAG00000023022	ENSOJAG00000023029	taf13 (ENSOJAG00000023037)	cox4i2 (ENSOJAG00000023040)	bcl2l1 (ENSOJAG00000023045)	ARFGEF2 (ENSOJAG00000023063)	pard6b (ENSOJAG00000023269)	adnpb (ENSOJAG00000023274)	dpm1 (ENSOJAG00000023293)	ENSOJAG00000023349 #22	rpl10 (ENSOJAG00000023352) #23	ENSOJAG00000023494	ENSOJAG00000023496	MRPL49 (ENSOJAG00000023498)	ENSOJAG00000023501	ENSOJAG00000023502	ENSOJAG00000023503	atp2b3b (ENSOJAG00000023510)	ccnq (ENSOJAG00000023524)	cfap126 (ENSOJAG00000023526)	ENSOJAG00000005673	zgc:101663 (ENSOJAG00000005683)	ap4b1 (ENSOJAG00000005707)	sephs3 (ENSOJAG00000005770)	ikbkg (ENSOJAG00000005882) #10
Percomorphaceae_C	ANCESTRAL SPECIES	4	ENSGT00530000063808.a #10	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a	ENSGT00950000183126.a.p.b	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546	ENSGT00940000163942.b	ENSGT00940000158374.c	ENSGT00510000048446	ENSGT00390000013740 #34	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d
Percomorphaceae_D	ANCESTRAL SPECIES	4	ENSGT00530000063808.a #10	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a	ENSGT00950000183126.a.p.b	ENSGT00940000153497.A	ENSGT00940000160546	ENSGT00940000163942.b	ENSGT00940000158374.c	ENSGT00510000048446	ENSGT00390000013740 #34	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B
Anabantaria	ANCESTRAL SPECIES	3	ENSGT00530000063808.a #10	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a	ENSGT00950000183126.a.p.b	ENSGT00940000153497.A	ENSGT00940000160546	ENSGT00940000163942.b	ENSGT00940000158374.c	ENSGT00510000048446	ENSGT00390000013740 #34	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B
Anabantoidei	ANCESTRAL SPECIES	2	ENSGT00530000063808.a #10	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00940000153497.A	ENSGT00940000160546	ENSGT00940000163942.b	ENSGT00940000158374.c	ENSGT00510000048446	ENSGT00390000013740 #34	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a	ENSGT00390000016016.B
Climbing perch	MODERN SPECIES	20	ENSATEG00000023163	ENSATEG00000023139	ENSATEG00000023127	cfap126 (ENSATEG00000023116)	ENSATEG00000023106	ENSATEG00000023077	atp2b3b (ENSATEG00000023060)	ENSATEG00000023051	ENSATEG00000023050	ENSATEG00000025860	ENSATEG00000023045	ENSATEG00000023029	emd (ENSATEG00000023042)	ENSATEG00000023000 #25	rpl10 (ENSATEG00000022985) #23	ENSATEG00000022981 #22	ENSATEG00000028826	ENSATEG00000022964	ENSATEG00000026763	ENSATEG00000022949	ENSATEG00000025375	ENSATEG00000029297	ENSATEG00000027159	ENSATEG00000027732	ENSATEG00000027008	ENSATEG00000030110	ENSATEG00000027355	ENSATEG00000028486	ENSATEG00000029994	ENSATEG00000028821	ENSATEG00000029111
Siamese fighting fish	MODERN SPECIES	18	plpbp (ENSBSLG00000023134)	tmed4 (ENSBSLG00000023181)	ikbkg (ENSBSLG00000023201) #10	sephs3 (ENSBSLG00000023212)	ap4b1 (ENSBSLG00000023226)	zgc:101663 (ENSBSLG00000023243)	cfap126 (ENSBSLG00000023247)	ccnq (ENSBSLG00000023255)	atp2b3b (ENSBSLG00000023381)	ENSBSLG00000025190	las1l (ENSBSLG00000025191)	ENSBSLG00000025192	MRPL49 (ENSBSLG00000025195)	emd (ENSBSLG00000025197)	rpl10 (ENSBSLG00000008233) #23	ENSBSLG00000008368 #22	ENSBSLG00000008516	ENSBSLG00000008523	ENSBSLG00000008536	ENSBSLG00000008553	ENSBSLG00000008571	ENSBSLG00000008580	ENSBSLG00000008585	ENSBSLG00000008588	ENSBSLG00000008917	ENSBSLG00000008958	ENSBSLG00000008974	ENSBSLG00000008991	ENSBSLG00000009014	ENSBSLG00000009038	ENSBSLG00000009081
Zig-zag eel	MODERN SPECIES	21	ENSMAMG00000015953 #10	ENSMAMG00000028686	ENSMAMG00000015914	ENSMAMG00000025984	cfap126 (ENSMAMG00000015904)	ENSMAMG00000028060	atp2b3b (ENSMAMG00000015805)	ENSMAMG00000015791	ENSMAMG00000015777	ENSMAMG00000015768	ENSMAMG00000015760	ENSMAMG00000015756	emd (ENSMAMG00000028253)	ENSMAMG00000015523 #25	rpl10 (ENSMAMG00000015455) #23	ENSMAMG00000015432 #22	ENSMAMG00000024570	ENSMAMG00000025570	ENSMAMG00000026286	ENSMAMG00000015333	ENSMAMG00000027462	ENSMAMG00000027204	ENSMAMG00000007126	ENSMAMG00000026706	ENSMAMG00000025614	ENSMAMG00000015254	ENSMAMG00000024441	ENSMAMG00000015206	ENSMAMG00000015234	ENSMAMG00000015242	ENSMAMG00000015191
Carangaria	ANCESTRAL SPECIES	2	ENSGT00530000063808.a #10	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a	ENSGT00950000183126.a.p.b	ENSGT00940000153497.A	ENSGT00940000160546	ENSGT00940000163942.b	ENSGT00940000158374.c	ENSGT00510000048446	ENSGT00390000013740 #34	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B
Carangaria_A	ANCESTRAL SPECIES	54	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00970000197642	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158892.b.j	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f #25	ENSGT00390000003897.f #23	ENSGT00950000182846.a.a.a.a.a.b #22
Seriola	ANCESTRAL SPECIES	113	ENSGT00530000063808.a #10	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158892.b.j	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f #25	ENSGT00390000003897.f #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a.jb.a
Yellowtail amberjack	MODERN SPECIES	2720									ENSSLDG00000001558	MRPL49 (ENSSLDG00000001537)	ENSSLDG00000001518	ENSSLDG00000001502	emd (ENSSLDG00000001470)	FLNA (ENSSLDG00000000850) #25	rpl10 (ENSSLDG00000000776) #23	ENSSLDG00000000769 #22	ENSSLDG00000000737	ENSSLDG00000000724
Greater amberjack	MODERN SPECIES	191	tmed4 (ENSSDUG00000014040)	ikbkg (ENSSDUG00000014012) #10	sephs3 (ENSSDUG00000014003)	ap4b1 (ENSSDUG00000013990)	zgc:101663 (ENSSDUG00000013979)	cfap126 (ENSSDUG00000013970)	ccnq (ENSSDUG00000013965)	atp2b3b (ENSSDUG00000013844)	ENSSDUG00000013831	ENSSDUG00000013818	MRPL49 (ENSSDUG00000013816)	NINJ1 (ENSSDUG00000013808)	emd (ENSSDUG00000013792)	FLNA (ENSSDUG00000013710) #25	rpl10 (ENSSDUG00000013659) #23	ENSSDUG00000013640 #22	ENSSDUG00000013621	ENSSDUG00000013602
Barramundi perch	DUPLICATION
Barramundi perch	DUPLICATION
Barramundi perch	MODERN SPECIES	1058															rpl10 (ENSLCAG00010019514) #23	ENSLCAG00010019506 #22
Barramundi perch	MODERN SPECIES	869															rpl10 (ENSLCAG00010000468) #23	ENSLCAG00010000463 #22	ENSLCAG00010000453	ENSLCAG00010000449
Barramundi perch	MODERN SPECIES	1692																ENSLCAG00010017406 #22	ENSLCAG00010017403	ENSLCAG00010017402
Pleuronectoidei	ANCESTRAL SPECIES	41	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT01060000248869	ENSGT00940000178462	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00940000153588.b.f #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a	ENSGT00940000153497.A	ENSGT00940000160546	ENSGT00940000163942.b	ENSGT00940000158374.c	ENSGT00510000048446	ENSGT00390000013740 #34	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a
Turbot	MODERN SPECIES	2	ENSSMAG00000001223 #10	ENSSMAG00000001258	ENSSMAG00000001287	ENSSMAG00000001296	cfap126 (ENSSMAG00000001320)	ENSSMAG00000001328	atp2b3b (ENSSMAG00000001353)	ENSSMAG00000001521	ENSSMAG00000001539	ENSSMAG00000031967	ENSSMAG00000001559	ENSSMAG00000027454	ENSSMAG00000034918	ENSSMAG00000001600 #25	ENSSMAG00000001919 #23	ENSSMAG00000023533 #22	ENSSMAG00000022970	ENSSMAG00000030462	ENSSMAG00000032581	ENSSMAG00000011834	ENSSMAG00000001959	ENSSMAG00000031949	ENSSMAG00000001997	ENSSMAG00000002008	ENSSMAG00000002035	ENSSMAG00000035530	ENSSMAG00000003904
Tongue sole	MODERN SPECIES	1	TBC1D22B (ENSCSEG00000003426)	ENSCSEG00000003422	dnali1 (ENSCSEG00000003419)	ENSCSEG00000003411	snrpg (ENSCSEG00000003401)	plpbp (ENSCSEG00000003395)	tmed4 (ENSCSEG00000003386)	ikbkg (ENSCSEG00000003341) #10	sephs3 (ENSCSEG00000003334)	ap4b1 (ENSCSEG00000003328)	zgc:101663 (ENSCSEG00000003323)	cfap126 (ENSCSEG00000003322)	ccnq (ENSCSEG00000003319)	atp2b3b (ENSCSEG00000003290)	rpl10 (ENSCSEG00000003267) #23	ENSCSEG00000003231 #22	las1l (ENSCSEG00000003223)	ENSCSEG00000003220	FLNA (ENSCSEG00000003135) #25	ENSCSEG00000003121	ENSCSEG00000003120	MRPL49 (ENSCSEG00000003115)	ENSCSEG00000003106	ENSCSEG00000003100	ENSCSEG00000003071	prkcz (ENSCSEG00000003042)	skia (ENSCSEG00000003029)	SNPH (ENSCSEG00000003019)	sdcbp2 (ENSCSEG00000002995)	fkbp1ab (ENSCSEG00000002991)	nsfl1c (ENSCSEG00000002978)
Eupercaria	ANCESTRAL SPECIES	4	ENSGT00530000063808.a #10	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.b	ENSGT00950000183126.a.p.a	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546	ENSGT00940000163942.b	ENSGT00940000158374.c	ENSGT00510000048446	ENSGT00390000013740 #34	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d
Tetraodontidae	ANCESTRAL SPECIES	256																ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00940000153497.A	ENSGT00940000160546	ENSGT00940000163942.b
Fugu	MODERN SPECIES	12	ccdc22 (ENSTRUG00000001754)	slc38a5b (ENSTRUG00000001541)	mthfr (ENSTRUG00000002976)	ENSTRUG00000026532	cnp-3 (ENSTRUG00000004003)	ENSTRUG00000000954	nppa (ENSTRUG00000020513)	HCK (ENSTRUG00000001630)	ENSTRUG00000024545	las1l (ENSTRUG00000028783)	ENSTRUG00000031428	MRPL49 (ENSTRUG00000002203)	rpl10 (ENSTRUG00000023282) #23	ENSTRUG00000028091	ENSTRUG00000032747	ENSTRUG00000017411 #22	prkcz (ENSTRUG00000029784)	skia (ENSTRUG00000032329)	ENSTRUG00000033499	ENSTRUG00000031401	ENSTRUG00000026747	pex10 (ENSTRUG00000027916)	stx6 (ENSTRUG00000031208)	ENSTRUG00000028047	hps3 (ENSTRUG00000027581)	ENSTRUG00000004265	ENSTRUG00000026039	SLC22A23 (ENSTRUG00000004085)	ENSTRUG00000004870	tbc1d7 (ENSTRUG00000005401)	PHACTR1 (ENSTRUG00000028501)
Tetraodon	MODERN SPECIES	26	AFAP1 (ENSTNIG00000004980)	cbln1 (ENSTNIG00000004979)	ENSTNIG00000000560	ENSTNIG00000002218	ENSTNIG00000004961	ENSTNIG00000004960	JAKMIP2 (ENSTNIG00000004959)	dpysl3 (ENSTNIG00000004958)	USP19 (ENSTNIG00000004957)	polr3h (ENSTNIG00000004956)	CSDC2 (ENSTNIG00000004955)	ENSTNIG00000004954	ENSTNIG00000004953	ENSTNIG00000004952	ENSTNIG00000004951 #25	ENSTNIG00000004950 #22	prkcz (ENSTNIG00000004949)	skia (ENSTNIG00000004948)	ENSTNIG00000004939	emp2 (ENSTNIG00000004938)	NDST2 (ENSTNIG00000004936)	ENSTNIG00000004935	NDST2 (ENSTNIG00000004934)	zswim8 (ENSTNIG00000004933)	rnf139 (ENSTNIG00000004932)	tatdn1 (ENSTNIG00000004931)	hspa12a (ENSTNIG00000004924)	ENSTNIG00000004922	ENSTNIG00000004915	ARFGEF2 (ENSTNIG00000004914)	bcl2l1 (ENSTNIG00000004913)
Eupecaria_A	ANCESTRAL SPECIES	4	ENSGT00530000063808.a #10	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.b	ENSGT00950000183126.a.p.a	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546	ENSGT00940000163942.b	ENSGT00940000158374.c	ENSGT00510000048446	ENSGT00390000013740 #34	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	1070														ENSLBEG00000017121	rpl10 (ENSLBEG00000016776) #23	ENSLBEG00000016680 #22	ikbkg (ENSLBEG00000016627) #10	tmed4 (ENSLBEG00000016585)	plpbp (ENSLBEG00000016544)	snrpg (ENSLBEG00000016516)	ENSLBEG00000016499	TBC1D22B (ENSLBEG00000016443)
Ballan wrasse	MODERN SPECIES	4880																ENSLBEG00000011342 #22
Eupecaria_B	ANCESTRAL SPECIES	5	ENSGT00530000063808.a #10	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.b	ENSGT00950000183126.a.p.a	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546	ENSGT00940000163942.b	ENSGT00940000158374.c	ENSGT00510000048446	ENSGT00390000013740 #34	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d
Perciformes	ANCESTRAL SPECIES	4	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00950000183126.a.p.b	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546	ENSGT00940000163942.b	ENSGT00940000158374.c	ENSGT00510000048446	ENSGT00390000013740 #34	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a
Cottioidei	ANCESTRAL SPECIES	2	ENSGT00940000159012	ENSGT00530000063808.a #10	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00940000177826	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000017253	ENSGT00390000003937	ENSGT00940000158219.a	ENSGT00940000153588.b.f #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00940000153497.A	ENSGT00610000087015	ENSGT00940000160546	ENSGT00940000163942.b	ENSGT00940000158374.c	ENSGT00510000048446	ENSGT00390000013740 #34	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a	ENSGT00390000016016.B
Lumpfish	MODERN SPECIES	22	tmed4 (ENSCLMG00005021105)	ikbkg (ENSCLMG00005021114) #10	sephs3 (ENSCLMG00005021118)	ap4b1 (ENSCLMG00005021125)	ENSCLMG00005021132	ENSCLMG00005021133	ccnq (ENSCLMG00005021136)	ENSCLMG00005021149	ENSCLMG00005021201	ENSCLMG00005021202	ENSCLMG00005021203	MRPL49 (ENSCLMG00005021205)	ENSCLMG00005021206	NINJ1 (ENSCLMG00005021207)	rpl10 (ENSCLMG00005021325) #23	ENSCLMG00005021337 #22	prkcz (ENSCLMG00005000120)	skia (ENSCLMG00005000147)	ENSCLMG00005000162	si:ch211-251b21.1 (ENSCLMG00005000200)	plch2a (ENSCLMG00005000378)	pex10 (ENSCLMG00005000580)	renbp (ENSCLMG00005000583) #34	ENSCLMG00005000601	dennd2da (ENSCLMG00005000603)	MTCH1 (ENSCLMG00005000614)	stk38a (ENSCLMG00005000627)	stk35 (ENSCLMG00005000630)	pdyn (ENSCLMG00005000635)	GMEB2 (ENSCLMG00005000637)	tpk2 (ENSCLMG00005000638)
Stickleback	MODERN SPECIES	11	ENSGACG00000013164	ap4b1 (ENSGACG00000013155)	zgc:101663 (ENSGACG00000013153)	ccnq (ENSGACG00000013143)	atp2b3a (ENSGACG00000013136)	ENSGACG00000022584	ENSGACG00000013130	MRPL49 (ENSGACG00000013129)	MRPL49 (ENSGACG00000013127)	ENSGACG00000013125	ENSGACG00000013117	ENSGACG00000013110	ENSGACG00000013103 #25	FLNA (ENSGACG00000013098) #25	rpl10 (ENSGACG00000013073) #23	ENSGACG00000013035 #22	prkcz (ENSGACG00000013018)	ENSGACG00000013016	ENSGACG00000013014	skia (ENSGACG00000013007)	ENSGACG00000013002	plch2a (ENSGACG00000012997)	tnnc1b (ENSGACG00000012954)	efhd2 (ENSGACG00000012943)	dedd (ENSGACG00000012937)	ENSGACG00000012890	mfn2 (ENSGACG00000012833)	ENSGACG00000012830	asxl1 (ENSGACG00000012822)	ENSGACG00000012816	porcnl (ENSGACG00000012800)
Perciformes_a	ANCESTRAL SPECIES	2	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00950000183126.a.p.b	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b.f #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a	ENSGT00940000153497.A	ENSGT00940000160546	ENSGT00940000163942.b	ENSGT00510000048446	ENSGT00390000013740 #34	ENSGT00940000178358	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B	ENSGT00410000025596.a.a	ENSGT00390000016016.B
Pike perch	MODERN SPECIES	102	sephs3 (ENSSLUG00000012992)	ap4b1 (ENSSLUG00000013003)	zgc:101663 (ENSSLUG00000013044)	cfap126 (ENSSLUG00000013045)	ccnq (ENSSLUG00000013050)	atp2b3b (ENSSLUG00000013076)	ENSSLUG00000013219	ENSSLUG00000013223	ENSSLUG00000013229	ENSSLUG00000013236	MRPL49 (ENSSLUG00000013238)	ENSSLUG00000013239	emd (ENSSLUG00000013241)	FLNA (ENSSLUG00000013362) #25	rpl10 (ENSSLUG00000015039) #23	ENSSLUG00000015069 #22	ENSSLUG00000015088	ENSSLUG00000015107	ENSSLUG00000015133	ENSSLUG00000015139	ENSSLUG00000015143	prkcz (ENSSLUG00000015208)	skia (ENSSLUG00000016443)	ENSSLUG00000016461	ENSSLUG00000016471	pex10 (ENSSLUG00000016502)	renbp (ENSSLUG00000016527) #34	ccr6a (ENSSLUG00000016736)	ENSSLUG00000016746	dennd2da (ENSSLUG00000016769)	stk38a (ENSSLUG00000016983)
Channel bull blenny	MODERN SPECIES	21	tmed4 (ENSCGOG00000020646)	ikbkg (ENSCGOG00000020664) #10	sephs3 (ENSCGOG00000020679)	ap4b1 (ENSCGOG00000020692)	zgc:101663 (ENSCGOG00000020702)	ENSCGOG00000020705	ccnq (ENSCGOG00000020710)	atp2b3a (ENSCGOG00000020968)	ENSCGOG00000023896	ENSCGOG00000023898	ENSCGOG00000023901	MRPL49 (ENSCGOG00000023902)	NINJ1 (ENSCGOG00000023905)	FLNA (ENSCGOG00000000997) #25	rpl10 (ENSCGOG00000013893) #23	ENSCGOG00000013902 #22	prkcz (ENSCGOG00000013939)	skia (ENSCGOG00000015530)	ENSCGOG00000015539	ENSCGOG00000015541	pex10 (ENSCGOG00000015552)	VPS13D (ENSCGOG00000015582)	igsf21b (ENSCGOG00000015981)	ENSCGOG00000015985	ENSCGOG00000015988	nppb (ENSCGOG00000015990)	nppal (ENSCGOG00000015991)	si:ch211-229n2.6 (ENSCGOG00000015993)	ENSCGOG00000015997	tnnc1b (ENSCGOG00000016000)	ENSCGOG00000016035
Eupecaria_C	ANCESTRAL SPECIES	5	ENSGT00530000063808.a #10	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00940000158892.b.j	ENSGT00940000153588.b.f #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.a	ENSGT00950000183126.a.p.b	ENSGT00940000153497.A	ENSGT00940000160546	ENSGT00940000163942.b	ENSGT00940000158374.c	ENSGT00510000048446	ENSGT00390000013740 #34	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B
Gilthead seabream	MODERN SPECIES	21	ENSSAUG00010009382	gata5 (ENSSAUG00010009386)	ENSSAUG00010009389	EPHB2 (ENSSAUG00010009411)	LRRC38 (ENSSAUG00010010625)	rcc2 (ENSSAUG00010010629)	rpl22 (ENSSAUG00010010635)	icmt (ENSSAUG00010010644)	rtel1 (ENSSAUG00010010664)	NDUFA11 (ENSSAUG00010012559)	tbc1d25 (ENSSAUG00010012561)	ccdc22 (ENSSAUG00010012571)	stk38a (ENSSAUG00010012621)	dennd2da (ENSSAUG00010012643)	ENSSAUG00010012655	ENSSAUG00010012657 #22	ENSSAUG00010012658	igsf21b (ENSSAUG00010012661)	VPS13D (ENSSAUG00010012745)	ARHGEF10L (ENSSAUG00010015919)	nppa (ENSSAUG00010017928)	ENSSAUG00010017930	nppal (ENSSAUG00010017933)	CLCN6 (ENSSAUG00010017957)	ENSSAUG00010018766	mthfr (ENSSAUG00010018771)	slc2a1a (ENSSAUG00010018779)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	20	ENSGT00940000159012	ENSGT00530000063808.a #10	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.d	ENSGT00390000016589	ENSGT00390000014785	ENSGT00390000003937	ENSGT00390000017253	ENSGT00940000158219.a	ENSGT00940000153588.b.f #25	ENSGT00390000003897 #23	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00950000183126.a.p.b	ENSGT00950000183126.a.p.a	ENSGT00940000153497.A	ENSGT00940000160546	ENSGT00940000163942.b	ENSGT00940000158374.c	ENSGT00510000048446	ENSGT00390000013740 #34	ENSGT00390000017353	ENSGT00990000203742	ENSGT00950000182931.A.a.b	ENSGT00940000153544.a.i.b	ENSGT00390000000020.a	ENSGT00940000158197.d	ENSGT00950000183149.B
Large yellow croaker	MODERN SPECIES	487	ikbkg (ENSLCRG00005019345) #10	sephs3 (ENSLCRG00005019304)	ap4b1 (ENSLCRG00005019299)	zgc:101663 (ENSLCRG00005019287)	cfap126 (ENSLCRG00005019280)	ccnq (ENSLCRG00005019271)	atp2b3b (ENSLCRG00005019207)	ENSLCRG00005019127	las1l (ENSLCRG00005019124)	ENSLCRG00005019119	MRPL49 (ENSLCRG00005019115)	ENSLCRG00005019112	FLNA (ENSLCRG00005018755) #25	rpl10 (ENSLCRG00005018675) #23	ENSLCRG00005018656 #23	ENSLCRG00005018651 #22	ENSLCRG00005018647	ENSLCRG00005018645	ENSLCRG00005018634	prkcz (ENSLCRG00005018463)	skia (ENSLCRG00005018359)	si:ch211-251b21.1 (ENSLCRG00005018335)	plch2a (ENSLCRG00005018214)	pex10 (ENSLCRG00005018145)	renbp (ENSLCRG00005018138) #34	ENSLCRG00005018134	ENSLCRG00005018130	dennd2da (ENSLCRG00005018105)	stk38a (ENSLCRG00005018053)	MTCH1 (ENSLCRG00005018024)	stk35 (ENSLCRG00005018003)
European seabass	MODERN SPECIES	14	ENSDLAG00005005865	cfap126 (ENSDLAG00005005817)	ENSDLAG00005028702	atp2b3b (ENSDLAG00005005470)	ENSDLAG00005028990	ENSDLAG00005005457	ENSDLAG00005027962	ENSDLAG00005032610	ENSDLAG00005030606	ENSDLAG00005031172	ENSDLAG00005029120	ENSDLAG00005005446	ENSDLAG00005021793 #25	rpl10 (ENSDLAG00005021711) #23	ENSDLAG00005021707	ENSDLAG00005021663 #22	ENSDLAG00005021656	ENSDLAG00005016178	ENSDLAG00005032911	ENSDLAG00005006462	ENSDLAG00005028433	ENSDLAG00005029036	ENSDLAG00005021641	ENSDLAG00005003670	ENSDLAG00005021334	ENSDLAG00005021303	ENSDLAG00005030875	ENSDLAG00005031668	si:ch211-251b21.1 (ENSDLAG00005021284)	ENSDLAG00005021209	pex10 (ENSDLAG00005021198)
Pinecone sodierfish	MODERN SPECIES	21	sephs3 (ENSMMDG00005004799)	ap4b1 (ENSMMDG00005004737)	zgc:101663 (ENSMMDG00005004716)	ENSMMDG00005004713	ccnq (ENSMMDG00005004710)	ENSMMDG00005004144	ENSMMDG00005004099	ENSMMDG00005004089	ENSMMDG00005004082	ENSMMDG00005004073	MRPL49 (ENSMMDG00005023269)	ENSMMDG00005023267	emd (ENSMMDG00005023263)	FLNA (ENSMMDG00005015354) #25	rpl10 (ENSMMDG00005015154) #23	DNASE1L1 (ENSMMDG00005014710) #22	ENSMMDG00005014603	atp6ap1a (ENSMMDG00005014585) #19	tafazzin (ENSMMDG00005014577) #20	ENSMMDG00005014556	ndnl2 (ENSMMDG00005014545)	ENSMMDG00005014540	ENSMMDG00005014240	ENSMMDG00005014222	ENSMMDG00005014109	hsd17b10 (ENSMMDG00005014103)	FAM120C (ENSMMDG00005013813)	IDH3G (ENSMMDG00005013805)	AVPR2 (ENSMMDG00005013804) #37	slc16a1b (ENSMMDG00005013787)	lima1a (ENSMMDG00005013784)
Cod	MODERN SPECIES	13	ENSGMOG00000008560	ENSGMOG00000008571	ENSGMOG00000008575	ENSGMOG00000008578	ENSGMOG00000031634	ENSGMOG00000024035	stmn4 (ENSGMOG00000023347)	ENSGMOG00000000832	paqr8 (ENSGMOG00000029479)	ENSGMOG00000032540	ENSGMOG00000012418	ENSGMOG00000027137	ENSGMOG00000029003	ENSGMOG00000030695	ENSGMOG00000029100	ENSGMOG00000017957 #22	ENSGMOG00000000611	ENSGMOG00000000601	ENSGMOG00000024877	ENSGMOG00000036977	ENSGMOG00000031017	ENSGMOG00000030172	ENSGMOG00000034835	rps7 (ENSGMOG00000013800)	rnaseh1 (ENSGMOG00000013818)	ENSGMOG00000035921	ENSGMOG00000023109	ccr6a (ENSGMOG00000036100)	ENSGMOG00000013795	SYNCRIP (ENSGMOG00000013179)	ENSGMOG00000013200
Protacanthopterygii	ANCESTRAL SPECIES	133							ENSGT00940000154955.b	ENSGT00950000182989.D.a.a.b	ENSGT00530000063168.a.a.b	ENSGT00940000155170	ENSGT00940000157506.f	ENSGT00940000164454	ENSGT00940000167069	ENSGT00390000018621 #20	ENSGT00940000156650.j #19	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00390000003897 #23	ENSGT00940000153588.b.f #25	ENSGT00390000003937	ENSGT00940000155445	ENSGT00390000001092	ENSGT00940000163962	ENSGT00940000157025	ENSGT00390000000950.c.a	ENSGT00530000063808.a #10	ENSGT00940000155067.b.b	ENSGT00940000159939	ENSGT00940000157365	ENSGT00940000162211	ENSGT00550000074828.b.f	ENSGT00940000155662.f
Salmoninae	ANCESTRAL SPECIES	1188																ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00390000003897.o.b #23	ENSGT00940000153588.b.f.a #25	ENSGT00390000003937
Huchen	MODERN SPECIES	8834																ENSHHUG00000000229 #22
Salmoninae_a	ANCESTRAL SPECIES	161							ENSGT00940000154709.a.b.a.b	ENSGT00940000166364	ENSGT00390000012929	ENSGT00940000154955.b	ENSGT00530000063168.a.a.b.p	ENSGT00940000164454	ENSGT00940000155170	ENSGT00390000018621.u #20	ENSGT00940000156650.j.j #19	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00390000003897.o.b #23	ENSGT00940000153588.b.f.a #25	ENSGT00390000003937	ENSGT00940000160210.d.a	ENSGT00940000158688.c.d.b	ENSGT00940000159534.e.c	ENSGT00940000165541.e.a	ENSGT00940000165405.i.b
Oncorhynchus	ANCESTRAL SPECIES	111							ENSGT00940000154709.a.b.a.b	ENSGT00940000166364	ENSGT00390000012929	ENSGT00940000154955.b	ENSGT00530000063168.a.a.b.p	ENSGT00940000164454	ENSGT00940000155170.f	ENSGT00390000018621.u #20	ENSGT00940000156650.j.j #19	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00390000003897.o.b #23	ENSGT00940000153588.b.f.a #25	ENSGT00390000003937	ENSGT00940000165254.d	ENSGT00940000163962	ENSGT00530000063808.a.n #10	ENSGT00390000007725.A.b.d.h	ENSGT00940000158688.c.d.b	ENSGT00940000159534.e.c	ENSGT00940000155545.a	ENSGT00940000160369.k.a	ENSGT00940000161969.r.a	ENSGT01020000230394.e.a.a.b.a.b.f
Rainbow trout	MODERN SPECIES	7								ENSOMYG00000008465	ENSOMYG00000008620	ENSOMYG00000008595	ENSOMYG00000008570	ENSOMYG00000058456	ENSOMYG00000008689	ENSOMYG00000008736	ENSOMYG00000077694 #19	DNASE1L1 (ENSOMYG00000053459) #22	ENSOMYG00000035700 #23	FLNA (ENSOMYG00000007274) #25	ENSOMYG00000071151	ENSOMYG00000074022	ENSOMYG00000005219	ENSOMYG00000067096	ENSOMYG00000061227	ENSOMYG00000063797 #10	ENSOMYG00000064249	ENSOMYG00000057348	ENSOMYG00000039569	ENSOMYG00000076227	ENSOMYG00000011256	ENSOMYG00000005093	ENSOMYG00000076683
Oncorhynchus_a	ANCESTRAL SPECIES	9																ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00390000003897.o.b.a #23	ENSGT00940000153588.b.f.a #25	ENSGT00390000003937	ENSGT00940000163962	ENSGT00530000063808.a.n #10	ENSGT00390000007725.A.b.d.h	ENSGT00940000158688.c.d.b	ENSGT00940000159534.e.c	ENSGT00940000155545.a	ENSGT00940000160369.k.a	ENSGT00940000161969.r.a	ENSGT00940000159667.a.f	ENSGT00940000164755.A	ENSGT01030000234637.b.c.g.g.b	ENSGT00940000166313.b
Coho salmon	MODERN SPECIES	16	ENSOKIG00005006950	atp6ap1a (ENSOKIG00005006939) #19	hsd17b10 (ENSOKIG00005006931)	ENSOKIG00005006927	ENSOKIG00005006916	ENSOKIG00005006909	ENSOKIG00005006902	ENSOKIG00005006898	FAM120C (ENSOKIG00005006302)	SLC16A1 (ENSOKIG00005006225)	ccdc115 (ENSOKIG00005006203)	ENSOKIG00005006187	ENSOKIG00005006180	ENSOKIG00005006162	ENSOKIG00005047134	ENSOKIG00005047127 #22	rpl10 (ENSOKIG00005047069) #23	FLNA (ENSOKIG00005046407) #25	ENSOKIG00005046323	ENSOKIG00005046317	ENSOKIG00005046314	ENSOKIG00005046308	ENSOKIG00005046289 #10	ngfa (ENSOKIG00005046277)	ENSOKIG00005046271	KCNA2 (ENSOKIG00005046252)	KCNA10 (ENSOKIG00005046244)	ENSOKIG00005046239	ENSOKIG00005046189	ENSOKIG00005043929	ENSOKIG00005043780
Salmo	ANCESTRAL SPECIES	154								ENSGT00940000154709.a.b.a.b	ENSGT00940000166364	ENSGT00390000012929	ENSGT00940000154955.b	ENSGT00530000063168.a.a.b.p	ENSGT00940000164454	ENSGT00940000155170	ENSGT00940000156650.j.j #19	ENSGT00950000182846.a.a.a.a.a.b #22	ENSGT00390000003897.o.b #23	ENSGT00940000153588.b.f.a #25	ENSGT01060000248869	ENSGT00940000165254.d	ENSGT00940000163962	ENSGT00530000063808.a.n #10	ENSGT00940000157504.c.a.d	ENSGT00390000007725.A.b.d.h	ENSGT00940000160210.d.a.a	ENSGT00940000158688.c.d.b	ENSGT00940000159534.e.c	ENSGT00940000165541.e.a	ENSGT00940000165405.i.b
Atlantic salmon	MODERN SPECIES	4	KCNA10 (ENSSSAG00000101897)	ENSSSAG00000106480	ENSSSAG00000042378	ENSSSAG00000013353	ENSSSAG00000082478	ENSSSAG00000068269	ENSSSAG00000068264	ENSSSAG00000009522	ccdc115 (ENSSSAG00000059076)	ENSSSAG00000099605	ENSSSAG00000091092	ENSSSAG00000081966	ENSSSAG00000052495	hsd17b10 (ENSSSAG00000041427)	ENSSSAG00000050346 #19	ENSSSAG00000104261 #22	rpl10 (ENSSSAG00000054819) #23	FLNA (ENSSSAG00000044359) #25	ENSSSAG00000044135	ENSSSAG00000100895	ENSSSAG00000092814	ENSSSAG00000118795	ENSSSAG00000083352 #10	ENSSSAG00000109610	ENSSSAG00000088768	ENSSSAG00000110828	ENSSSAG00000041740	ENSSSAG00000099315	ENSSSAG00000102964	ENSSSAG00000041614	ENSSSAG00000110400
River trout	MODERN SPECIES	23				ENSSTUG00000013987	ENSSTUG00000013883	ENSSTUG00000013874	ENSSTUG00000013867	ENSSTUG00000013864	ccdc115 (ENSSTUG00000013856)	slc16a1b (ENSSTUG00000013840)	FAM120C (ENSSTUG00000013483)	ENSSTUG00000013448	hsd17b10 (ENSSTUG00000013339)	ENSSTUG00000013249 #19	ENSSTUG00000013240	DNASE1L1 (ENSSTUG00000013122) #22	rpl10 (ENSSTUG00000013034) #23	FLNA (ENSSTUG00000011907) #25	ENSSTUG00000011848	ENSSTUG00000011837	ENSSTUG00000011748	ENSSTUG00000011737	ENSSTUG00000011728	ikbkg (ENSSTUG00000011716) #10	ENSSTUG00000011681	KCNA3 (ENSSTUG00000011646)	KCNA2 (ENSSTUG00000011637)	KCNA10 (ENSSTUG00000011629)	ENSSTUG00000011621	uba1 (ENSSTUG00000009041)	ENSSTUG00000008920
Northern pike	MODERN SPECIES	11	ENSELUG00000021840	ENSELUG00000030261	ENSELUG00000032831	ENSELUG00000021833	ENSELUG00000021830	ENSELUG00000021821	slc16a1b (ENSELUG00000021804)	FAM120C (ENSELUG00000021767)	hsd17b10 (ENSELUG00000021667)	ENSELUG00000021621	ndnl2 (ENSELUG00000021141)	ENSELUG00000021101	tafazzin (ENSELUG00000020922) #20	atp6ap1a (ENSELUG00000020872) #19	ENSELUG00000020740	DNASE1L1 (ENSELUG00000020718) #22	rpl10 (ENSELUG00000020689) #23	ENSELUG00000028518	FLNA (ENSELUG00000020588) #25	ENSELUG00000020424	ENSELUG00000034309	ENSELUG00000034231	ENSELUG00000027391	ccnq (ENSELUG00000030631)	cfap126 (ENSELUG00000000891)	ENSELUG00000032308	ap4b1 (ENSELUG00000020320)	sephs3 (ENSELUG00000020249)	ENSELUG00000031420	ikbkg (ENSELUG00000020223) #10	ENSELUG00000020197