Glires	ANCESTRAL SPECIES	4	ENSGT01100000263574.a #7	ENSGT00730000111596 #8	ENSGT00940000162121 #9	ENSGT00940000162202.B #11	ENSGT00940000162202.A #12	ENSGT00390000014843	ENSGT00940000162388.A #13	ENSGT00940000162388.B #14	ENSGT00940000163803 #15	ENSGT00940000161726 #16	ENSGT00940000165147 #17	ENSGT00940000155808 #18	ENSGT00940000159544 #19	ENSGT00390000010327 #20	ENSGT00940000155687 #21	ENSGT00950000182837.b.a #22	ENSGT00940000155606.b #23	ENSGT00940000158666 #24	ENSGT00940000153804.B #25	ENSGT00940000159521 #26	ENSGT00950000183080.a.a #27	ENSGT00940000160653 #28	ENSGT00940000160329 #29	ENSGT00390000016495 #30	ENSGT00950000183019.f.b.a #32	ENSGT00940000156707 #31	ENSGT00940000161665 #33	ENSGT00940000161132 #34	ENSGT00390000007809.a #35	ENSGT00950000182825.A.a.b.a.b.a.b.b ##36	ENSGT00950000182825.A.a.b.a.b.a.b.a.b ##36
Rodentia	ANCESTRAL SPECIES	5	ENSGT00730000111596 #8	ENSGT00940000162121 #9	ENSGT00940000162202.C #10	ENSGT00940000162202.B #11	ENSGT00940000162202.A #12	ENSGT00390000014843	ENSGT00940000162388.A #13	ENSGT00940000162388.B #14	ENSGT00940000163803 #15	ENSGT00940000161726 #16	ENSGT00940000165147 #17	ENSGT00940000155808 #18	ENSGT00940000159544 #19	ENSGT00390000010327 #20	ENSGT00940000155687 #21	ENSGT00950000182837.b.a #22	ENSGT00940000155606.b #23	ENSGT00940000158666 #24	ENSGT00940000153804.B #25	ENSGT00940000159521 #26	ENSGT00950000183080.a.a #27	ENSGT00940000160653 #28	ENSGT00940000160329 #29	ENSGT00390000016495 #30	ENSGT00950000183019.f.b.a #32	ENSGT00940000156707 #31	ENSGT00940000161665 #33	ENSGT00940000161132 #34	ENSGT00390000007809.a #35	ENSGT00950000182825.A.a.b.a.b.a.b.b ##36	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #36
Rodentia_B	ANCESTRAL SPECIES	3	ENSGT00730000111596 #8	ENSGT00940000162121 #9	ENSGT00940000162202.C #10	ENSGT00940000162202.B #11	ENSGT00940000162202.A #12	ENSGT00940000164920	ENSGT00940000162388.A #13	ENSGT00940000162388.B #14	ENSGT00940000163803 #15	ENSGT00940000161726 #16	ENSGT00940000165147 #17	ENSGT00940000155808 #18	ENSGT00940000159544 #19	ENSGT00390000010327 #20	ENSGT00940000155687 #21	ENSGT00950000182837.b.a #22	ENSGT00940000155606.b #23	ENSGT00940000158666 #24	ENSGT00940000153804.B #25	ENSGT00940000159521 #26	ENSGT00950000183080.a.a #27	ENSGT00940000160653 #28	ENSGT00940000160329 #29	ENSGT00390000016495 #30	ENSGT00950000183019.f.b.a #32	ENSGT00940000156707 #31	ENSGT00940000161665 #33	ENSGT00940000161132 #34	ENSGT00390000007809.a #35	ENSGT00950000182825.A.a.b.a.b.a.b.b ##36	ENSGT00950000182825.A.a.b.a.b.a.b.a.b ##36
Myomorpha	ANCESTRAL SPECIES	2	ENSGT00730000111596 #8	ENSGT00940000162121 #9	ENSGT00940000162202.C #10	ENSGT00940000162202.B #11	ENSGT00940000162202.A #12	ENSGT00940000164920	ENSGT00940000162388.A #13	ENSGT00940000162388.B #14	ENSGT00940000163803 #15	ENSGT00940000161726 #16	ENSGT00940000165147 #17	ENSGT00940000155808 #18	ENSGT00940000159544 #19	ENSGT00390000010327 #20	ENSGT00940000155687 #21	ENSGT00950000182837.b.a #22	ENSGT00940000155606.b #23	ENSGT00940000158666 #24	ENSGT00940000153804.B #25	ENSGT00940000159521 #26	ENSGT00950000183080.a.a #27	ENSGT00940000160653 #28	ENSGT00940000160329 #29	ENSGT00390000016495 #30	ENSGT00950000183019.f.b.a #32	ENSGT00940000156707 #31	ENSGT00940000161665 #33	ENSGT00940000161132 #34	ENSGT00390000007809.a #35	ENSGT00950000182825.A.a.b.a.b.a.b.b ##36	ENSGT00950000182825.A.a.b.a.b.a.b.a.b ##36
Muroidea	ANCESTRAL SPECIES	31	ENSGT00730000111596 #8	ENSGT00940000162121 #9	ENSGT00940000162202.C #10	ENSGT00940000162202.B #11	ENSGT00940000162202.A #12	ENSGT00940000164920	ENSGT00940000162388.A #13	ENSGT00940000162388.B #14	ENSGT00940000163803 #15	ENSGT00940000161726 #16	ENSGT00940000165147 #17	ENSGT00940000155808 #18	ENSGT00940000159544 #19	ENSGT00390000010327 #20	ENSGT00940000155687 #21	ENSGT00950000182837.b.a #22	ENSGT00940000155606.b #23	ENSGT00940000158666 #24	ENSGT00940000153804.B #25	ENSGT00940000159521 #26	ENSGT00950000183080.a.a #27	ENSGT00940000160653 #28	ENSGT00940000160329 #29	ENSGT00390000016495 #30	ENSGT00950000183019.f.b.a #32	ENSGT00940000156707 #31	ENSGT00940000161665 #33	ENSGT00940000161132 #34	ENSGT00390000007809.a #35	ENSGT00950000182825.A.a.b.a.b.a.b.b ##36	ENSGT00950000182825.A.a.b.a.b.a.b.a.b ##36
Muroidea_A	ANCESTRAL SPECIES	9	ENSGT00730000111596 #8	ENSGT00940000162121 #9	ENSGT00940000162202.C #10	ENSGT00940000162202.B #11	ENSGT00940000162202.A #12	ENSGT00940000164920	ENSGT00940000162388.A #13	ENSGT00940000162388.B #14	ENSGT00940000163803 #15	ENSGT00940000161726 #16	ENSGT00940000165147 #17	ENSGT00940000155808 #18	ENSGT00940000159544 #19	ENSGT00390000010327 #20	ENSGT00940000155687 #21	ENSGT00950000182837.b.a #22	ENSGT00940000155606.b #23	ENSGT00940000158666 #24	ENSGT00940000153804.B #25	ENSGT00940000159521 #26	ENSGT00950000183080.a.a #27	ENSGT00940000160653 #28	ENSGT00940000160329 #29	ENSGT00390000016495 #30	ENSGT00950000183019.f.b.a #32	ENSGT00940000156707 #31	ENSGT00940000161665 #33	ENSGT00940000161132 #34	ENSGT00390000007809.a #35	ENSGT00950000182825.A.a.b.a.b.a.b.b ##36	ENSGT00950000182825.A.a.b.a.b.a.b.a.b ##36
Murinae	ANCESTRAL SPECIES	10	ENSGT00730000111596 #8	ENSGT00940000162121 #9	ENSGT00940000162202.C #10	ENSGT00940000162202.B #11	ENSGT00940000162202.A #12	ENSGT00940000164920	ENSGT00940000162388.A #13	ENSGT00940000162388.B #14	ENSGT00940000163803 #15	ENSGT00940000161726 #16	ENSGT00940000165147 #17	ENSGT00940000155808 #18	ENSGT00940000159544 #19	ENSGT00390000010327 #20	ENSGT00940000155687 #21	ENSGT00950000182837.b.a #22	ENSGT00940000155606.b #23	ENSGT00940000158666 #24	ENSGT00940000153804.B #25	ENSGT00940000159521 #26	ENSGT00950000183080.a.a #27	ENSGT00940000160653 #28	ENSGT00940000160329 #29	ENSGT00390000016495 #30	ENSGT00950000183019.f.b.a #32	ENSGT00940000156707 #31	ENSGT00940000161665 #33	ENSGT00940000161132 #34	ENSGT00390000007809.a #35	ENSGT00950000182825.A.a.b.a.b.a.b.b ##36	ENSGT00950000182825.A.a.b.a.b.a.b.a.b ##36
Rat	MODERN SPECIES	17	Olr1877 (ENSRNOG00000070612) #7	H1f7 (ENSRNOG00000029545) #8	Zfp641 (ENSRNOG00000032447) #9	Or8s16 (ENSRNOG00000067164) #10	Or8s5 (ENSRNOG00000064461) #11	Or8s2 (ENSRNOG00000033022) #12	Or8s10 (ENSRNOG00000067109) #13	Or8s8 (ENSRNOG00000070632) #14	ENSRNOG00000062462 #15	Lalba (ENSRNOG00000010811) #16	Or11m3 (ENSRNOG00000031503) #17	Kansl2 (ENSRNOG00000060185) #18	Ccnt1 (ENSRNOG00000053054) #19	Tex49 (ENSRNOG00000057264) #20	Adcy6 (ENSRNOG00000054757) #21	Cacnb3 (ENSRNOG00000054274) #22	Ddx23 (ENSRNOG00000060154) #23	Rnd1 (ENSRNOG00000059857) #24	Ccdc65 (ENSRNOG00000058916) #25	Fkbp11 (ENSRNOG00000070637) #26	Arf3 (ENSRNOG00000054775) #27	Wnt10b (ENSRNOG00000061238) #28	Wnt1 (ENSRNOG00000061818) #29	Ddn (ENSRNOG00000059605) #30	Prkag1 (ENSRNOG00000061499) #31	Prkag1 (ENSRNOG00000070180) #32	Rhebl1 (ENSRNOG00000054385) #33	Dhh (ENSRNOG00000053675) #34	Lmbr1l (ENSRNOG00000061607) #35	Tuba1a (ENSRNOG00000053468) #36	AC114446.1 (ENSRNOG00000059545) #37
Mus	ANCESTRAL SPECIES	11	ENSGT01100000263574.a.f.a.f #7	ENSGT00730000111596 #8	ENSGT00940000162121 #9	ENSGT00940000162202.B #11	ENSGT00940000162202.A #12	ENSGT00940000164920	ENSGT00940000162388.A #13	ENSGT00940000162388.B #14	ENSGT00940000163803 #15	ENSGT00940000161726 #16	ENSGT00940000165147 #17	ENSGT00940000155808 #18	ENSGT00940000159544 #19	ENSGT00390000010327 #20	ENSGT00940000155687 #21	ENSGT00950000182837.b.a #22	ENSGT00940000155606.b #23	ENSGT00940000158666 #24	ENSGT00940000153804.B #25	ENSGT00940000159521 #26	ENSGT00950000183080.a.a #27	ENSGT00940000160653 #28	ENSGT00940000160329 #29	ENSGT00390000016495 #30	ENSGT00950000183019.f.b.a #32	ENSGT00940000156707 #31	ENSGT00940000161665 #33	ENSGT00940000161132 #34	ENSGT00390000007809.a #35	ENSGT00950000182825.A.a.b.a.b.a.b.b ##36	ENSGT00950000182825.A.a.b.a.b.a.b.a.b ##36
Mus_A	ANCESTRAL SPECIES	13	ENSGT01100000263574.a.f.a.e.b.a.a #7	ENSGT00730000111596 #8	ENSGT00940000162121 #9	ENSGT00940000162202.B #11	ENSGT00940000162202.A #12	ENSGT00940000164920	ENSGT00940000162388.A #13	ENSGT00940000162388.B #14	ENSGT00940000163803 #15	ENSGT00940000161726 #16	ENSGT00940000165147 #17	ENSGT00940000155808 #18	ENSGT00940000159544 #19	ENSGT00390000010327 #20	ENSGT00940000155687 #21	ENSGT00950000182837.b.a #22	ENSGT00940000155606.b #23	ENSGT00940000158666 #24	ENSGT00940000153804.B #25	ENSGT00940000159521 #26	ENSGT00950000183080.a.a #27	ENSGT00940000160653 #28	ENSGT00940000160329 #29	ENSGT00390000016495 #30	ENSGT00950000183019.f.b.a #32	ENSGT00940000156707 #31	ENSGT00940000161665 #33	ENSGT00940000161132 #34	ENSGT00390000007809.a #35	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #36	ENSGT00950000182825.A.a.b.a.b.a.b.a.b ##36
Mus_B	ANCESTRAL SPECIES	12	ENSGT00730000111596 #8	ENSGT00940000162121 #9	ENSGT00940000159881.b	ENSGT00940000162202.B #11	ENSGT00940000162202.A #12	ENSGT00940000164920	ENSGT00940000162388.A #13	ENSGT00940000162388.B #14	ENSGT00940000163803 #15	ENSGT00940000161726 #16	ENSGT00940000165147 #17	ENSGT00940000155808 #18	ENSGT00940000159544 #19	ENSGT00390000010327 #20	ENSGT00940000155687 #21	ENSGT00950000182837.b.a #22	ENSGT00940000155606.b #23	ENSGT00940000158666 #24	ENSGT00940000153804.B #25	ENSGT00940000159521 #26	ENSGT00950000183080.a.a #27	ENSGT00940000160653 #28	ENSGT00940000160329 #29	ENSGT00390000016495 #30	ENSGT00950000183019.f.b.a #32	ENSGT00940000156707 #31	ENSGT00940000161665 #33	ENSGT00940000161132 #34	ENSGT00390000007809.a #35	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #36	ENSGT00950000182825.A.a.b.a.b.a.b.a.b ##36
Mus_C	ANCESTRAL SPECIES	17	ENSGT00730000111596 #8	ENSGT00940000162121 #9	ENSGT00940000159881.b	ENSGT00940000162202.B #11	ENSGT00940000162202.A #12	ENSGT00940000164920	ENSGT00940000162388.A #13	ENSGT00940000162388.B #14	ENSGT00940000163803 #15	ENSGT00940000161726 #16	ENSGT00940000165147 #17	ENSGT00940000155808 #18	ENSGT00940000159544 #19	ENSGT00390000010327 #20	ENSGT00940000155687 #21	ENSGT00950000182837.b.a #22	ENSGT00940000155606.b #23	ENSGT00940000158666 #24	ENSGT00940000153804.B #25	ENSGT00940000159521 #26	ENSGT00950000183080.a.a #27	ENSGT00940000160653 #28	ENSGT00940000160329 #29	ENSGT00390000016495 #30	ENSGT00950000183019.f.b.a #32	ENSGT00940000156707 #31	ENSGT00940000161665 #33	ENSGT00940000161132 #34	ENSGT00390000007809.a #35	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #36	ENSGT00950000182825.A.a.b.a.b.a.b.a.b ##36
Steppe mouse	MODERN SPECIES	3092	Ccdc184 (ENSMSIG00000000285)	Or10ad1b (ENSMSIG00000000298) #7	H1f7 (ENSMSIG00000000314) #8	Zfp641 (ENSMSIG00000000347) #9	ENSMSIG00000000412	ENSMSIG00000000424	Or8s5 (ENSMSIG00000000437) #11	Or8s2 (ENSMSIG00000000448) #12	Or8s8 (ENSMSIG00000000461) #14	ENSMSIG00000000476 #15	Lalba (ENSMSIG00000000500) #16	Or11m3 (ENSMSIG00000000513) #17	Kansl2 (ENSMSIG00000000531) #18	Ccnt1 (ENSMSIG00000000619) #19	Adcy6 (ENSMSIG00000000695) #21	Cacnb3 (ENSMSIG00000000901) #22	Ddx23 (ENSMSIG00000001169) #23	Rnd1 (ENSMSIG00000001241) #24	Ccdc65 (ENSMSIG00000001269) #25	Arf3 (ENSMSIG00000001320) #27	Wnt10b (ENSMSIG00000001386) #28	Wnt1 (ENSMSIG00000001511) #29	Ddn (ENSMSIG00000001553) #30	Prkag1 (ENSMSIG00000001568) #32	ENSMSIG00000002088 #33	Dhh (ENSMSIG00000002172) #34	Lmbr1l (ENSMSIG00000002200) #35	ENSMSIG00000002356 #36	Tuba1a (ENSMSIG00000002382) ##36	Tuba1c (ENSMSIG00000002410) #36	Prph (ENSMSIG00000002429)
spretus	MODERN SPECIES	6	MGP_SPRETEiJ_G0021121 #7	H1f7 (MGP_SPRETEiJ_G0021122) #8	Zfp641 (MGP_SPRETEiJ_G0021123) #9	MGP_SPRETEiJ_G0021124	Or8s5 (MGP_SPRETEiJ_G0021125) #11	Or8s2 (MGP_SPRETEiJ_G0021126) #12	MGP_SPRETEiJ_G0021127	Or8s10 (MGP_SPRETEiJ_G0021128) #13	Or8s8 (MGP_SPRETEiJ_G0021129) #14	Lalba (MGP_SPRETEiJ_G0021130) #16	Or11m3 (MGP_SPRETEiJ_G0021131) #17	Kansl2 (MGP_SPRETEiJ_G0021132) #18	Ccnt1 (MGP_SPRETEiJ_G0021133) #19	Tex49 (MGP_SPRETEiJ_G0021134) #20	Adcy6 (MGP_SPRETEiJ_G0021135) #21	Cacnb3 (MGP_SPRETEiJ_G0021136) #22	Ddx23 (MGP_SPRETEiJ_G0021137) #23	Rnd1 (MGP_SPRETEiJ_G0021138) #24	Ccdc65 (MGP_SPRETEiJ_G0021139) #25	Fkbp11 (MGP_SPRETEiJ_G0021140) #26	Arf3 (MGP_SPRETEiJ_G0021141) #27	Wnt10b (MGP_SPRETEiJ_G0021142) #28	Wnt1 (MGP_SPRETEiJ_G0021143) #29	Ddn (MGP_SPRETEiJ_G0021144) #30	Prkag1 (MGP_SPRETEiJ_G0021145) #32	Kmt2d (MGP_SPRETEiJ_G0021146) #31	Rhebl1 (MGP_SPRETEiJ_G0021147) #33	Dhh (MGP_SPRETEiJ_G0021148) #34	Lmbr1l (MGP_SPRETEiJ_G0021149) #35	Prph (MGP_SPRETEiJ_G0021150)	Troap (MGP_SPRETEiJ_G0021151)
Mouse	MODERN SPECIES	6	Or10ad1b (ENSMUSG00000059460) #7	H1f7 (ENSMUSG00000048077) #8	Zfp641 (ENSMUSG00000022987) #9	Or8s16 (ENSMUSG00000062037)	Or8s5 (ENSMUSG00000051793) #11	Or8s2 (ENSMUSG00000056184) #12	Or8s10 (ENSMUSG00000063780) #13	Or8s8 (ENSMUSG00000032987) #14	OR5BS1P (ENSMUSG00000108728) #15	Lalba (ENSMUSG00000022991) #16	Or11m3 (ENSMUSG00000054036) #17	Kansl2 (ENSMUSG00000022992) #18	Ccnt1 (ENSMUSG00000011960) #19	Tex49 (ENSMUSG00000022993) #20	Adcy6 (ENSMUSG00000022994) #21	Cacnb3 (ENSMUSG00000003352) #22	Ddx23 (ENSMUSG00000003360) #23	Rnd1 (ENSMUSG00000054855) #24	Ccdc65 (ENSMUSG00000003354) #25	Fkbp11 (ENSMUSG00000003355) #26	Arf3 (ENSMUSG00000051853) #27	Wnt10b (ENSMUSG00000022996) #28	Wnt1 (ENSMUSG00000022997) #29	Ddn (ENSMUSG00000059213) #30	Prkag1 (ENSMUSG00000067713) #32	Kmt2d (ENSMUSG00000048154) #31	Rhebl1 (ENSMUSG00000023755) #33	Dhh (ENSMUSG00000023000) #34	Lmbr1l (ENSMUSG00000022999) #35	Tuba1b (ENSMUSG00000023004) #36	Gm49450 (ENSMUSG00000116358)
Ryukyu mouse	MODERN SPECIES	6	MGP_CAROLIEiJ_G0020224 #7	MGP_CAROLIEiJ_G0020225 #7	H1f7 (MGP_CAROLIEiJ_G0020226) #8	Zfp641 (MGP_CAROLIEiJ_G0020227) #9	Or8s5 (MGP_CAROLIEiJ_G0020228) #11	Or8s2 (MGP_CAROLIEiJ_G0020229) #12	MGP_CAROLIEiJ_G0020230	Or8s10 (MGP_CAROLIEiJ_G0020231) #13	Or8s8 (MGP_CAROLIEiJ_G0020232) #14	Lalba (MGP_CAROLIEiJ_G0020233) #16	Or11m3 (MGP_CAROLIEiJ_G0020234) #17	Kansl2 (MGP_CAROLIEiJ_G0020235) #18	Ccnt1 (MGP_CAROLIEiJ_G0020236) #19	Tex49 (MGP_CAROLIEiJ_G0020237) #20	Adcy6 (MGP_CAROLIEiJ_G0020238) #21	Cacnb3 (MGP_CAROLIEiJ_G0020239) #22	Ddx23 (MGP_CAROLIEiJ_G0020240) #23	Rnd1 (MGP_CAROLIEiJ_G0020241) #24	Ccdc65 (MGP_CAROLIEiJ_G0020242) #25	Fkbp11 (MGP_CAROLIEiJ_G0020243) #26	Arf3 (MGP_CAROLIEiJ_G0020244) #27	Wnt10b (MGP_CAROLIEiJ_G0020245) #28	Wnt1 (MGP_CAROLIEiJ_G0020246) #29	Ddn (MGP_CAROLIEiJ_G0020247) #30	Prkag1 (MGP_CAROLIEiJ_G0020248) #32	Kmt2d (MGP_CAROLIEiJ_G0020249) #31	Rhebl1 (MGP_CAROLIEiJ_G0020250) #33	Dhh (MGP_CAROLIEiJ_G0020251) #34	Lmbr1l (MGP_CAROLIEiJ_G0020252) #35	MGP_CAROLIEiJ_G0020253 #36	MGP_CAROLIEiJ_G0020254
Shrew mouse	MODERN SPECIES	8	MGP_PahariEiJ_G0020227 #7	MGP_PahariEiJ_G0020228 #7	H1f7 (MGP_PahariEiJ_G0020229) #8	Zfp641 (MGP_PahariEiJ_G0020230) #9	Or8s5 (MGP_PahariEiJ_G0020231) #11	Or8s2 (MGP_PahariEiJ_G0020232) #12	MGP_PahariEiJ_G0020233	Or8s10 (MGP_PahariEiJ_G0020234) #13	Or8s8 (MGP_PahariEiJ_G0020235) #14	Lalba (MGP_PahariEiJ_G0020236) #16	Or11m3 (MGP_PahariEiJ_G0020237) #17	Kansl2 (MGP_PahariEiJ_G0020238) #18	Ccnt1 (MGP_PahariEiJ_G0020239) #19	Tex49 (MGP_PahariEiJ_G0020240) #20	Adcy6 (MGP_PahariEiJ_G0020241) #21	Cacnb3 (MGP_PahariEiJ_G0020242) #22	Ddx23 (MGP_PahariEiJ_G0020243) #23	Rnd1 (MGP_PahariEiJ_G0020244) #24	Ccdc65 (MGP_PahariEiJ_G0020245) #25	Fkbp11 (MGP_PahariEiJ_G0020246) #26	Arf3 (MGP_PahariEiJ_G0020247) #27	Wnt10b (MGP_PahariEiJ_G0020248) #28	Wnt1 (MGP_PahariEiJ_G0020249) #29	Ddn (MGP_PahariEiJ_G0020250) #30	Prkag1 (MGP_PahariEiJ_G0020251) #32	Kmt2d (MGP_PahariEiJ_G0020252) #31	Rhebl1 (MGP_PahariEiJ_G0020253) #33	Dhh (MGP_PahariEiJ_G0020254) #34	Lmbr1l (MGP_PahariEiJ_G0020255) #35	MGP_PahariEiJ_G0020257 ##36	MGP_PahariEiJ_G0020256 ##36
Cricetidae	ANCESTRAL SPECIES	10	ENSGT01100000263574.a.f.b ##7	ENSGT00730000111596 #8	ENSGT00940000162121 #9	ENSGT00940000162202.C #10	ENSGT00940000162202.B #11	ENSGT00940000162202.A #12	ENSGT00940000162388.A #13	ENSGT00940000162388.B #14	ENSGT00940000163803 #15	ENSGT00940000161726 #16	ENSGT00940000165147 #17	ENSGT00940000155808 #18	ENSGT00940000159544 #19	ENSGT00390000010327 #20	ENSGT00940000155687 #21	ENSGT00950000182837.b.a #22	ENSGT00940000155606.b #23	ENSGT00940000158666 #24	ENSGT00940000153804.B #25	ENSGT00940000159521 #26	ENSGT00950000183080.a.a #27	ENSGT00940000160653 #28	ENSGT00940000160329 #29	ENSGT00390000016495 #30	ENSGT00950000183019.f.b.a #32	ENSGT00940000156707 #31	ENSGT00940000161665 #33	ENSGT00940000161132 #34	ENSGT00390000007809.a #35	ENSGT00950000182825.A.a.b.a.b.a.b.b ##36	ENSGT00950000182825.A.a.b.a.b.a.b.a.b ##36
Cricetinae	ANCESTRAL SPECIES	3	ENSGT01100000263574.a.f.b ##7	ENSGT00730000111596 #8	ENSGT00940000162121 #9	ENSGT00940000162202.B #11	ENSGT00940000162202.A #12	ENSGT00940000164920	ENSGT00940000162388.A #13	ENSGT00940000162388.B #14	ENSGT00940000163803 #15	ENSGT00940000161726 #16	ENSGT00940000165147 #17	ENSGT00940000155808 #18	ENSGT00940000159544 #19	ENSGT00390000010327 #20	ENSGT00940000155687 #21	ENSGT00950000182837.b.a #22	ENSGT00940000155606.b #23	ENSGT00940000158666 #24	ENSGT00940000153804.B #25	ENSGT00940000159521 #26	ENSGT00950000183080.a.a #27	ENSGT00940000160653 #28	ENSGT00940000160329 #29	ENSGT00390000016495 #30	ENSGT00950000183019.f.b.a #32	ENSGT00940000156707 #31	ENSGT00940000161665 #33	ENSGT00940000161132 #34	ENSGT00390000007809.a #35	ENSGT00950000182825.A.a.b.a.b.a.b.b ##36	ENSGT00950000182825.A.a.b.a.b.a.b.a.b ##36
Golden Hamster	MODERN SPECIES	626	Pfkm (ENSMAUG00000016492)	Asb8 (ENSMAUG00000019139)	Ccdc184 (ENSMAUG00000010780)	ENSMAUG00000019216	ENSMAUG00000014007	H1f7 (ENSMAUG00000010839) #8	Zfp641 (ENSMAUG00000010993) #9	Or8s16 (ENSMAUG00000011283)	Or8s2 (ENSMAUG00000015201) #12	ENSMAUG00000012783	Lalba (ENSMAUG00000013490) #16	Kansl2 (ENSMAUG00000015668) #18	Ccnt1 (ENSMAUG00000015960) #19	Tex49 (ENSMAUG00000010854) #20	Adcy6 (ENSMAUG00000011342) #21	Cacnb3 (ENSMAUG00000012005) #22	Ddx23 (ENSMAUG00000012336) #23	Rnd1 (ENSMAUG00000015221) #24	Ccdc65 (ENSMAUG00000015430) #25	Fkbp11 (ENSMAUG00000015766) #26	Arf3 (ENSMAUG00000011928) #27	Wnt10b (ENSMAUG00000012082) #28	Wnt1 (ENSMAUG00000012154) #29	Ddn (ENSMAUG00000011464) #30	Prkag1 (ENSMAUG00000011761) #32	ENSMAUG00000012028 #31	ENSMAUG00000012521 #31	Rhebl1 (ENSMAUG00000013128) #33	Dhh (ENSMAUG00000013999) #34	Lmbr1l (ENSMAUG00000014206) #35	Prph (ENSMAUG00000015253)
Chinese hamster chok1gshd	MODERN SPECIES	1	ENSCGRG00001009005	ENSCGRG00001001784 ##7	H1f7 (ENSCGRG00001006632) #8	Zfp641 (ENSCGRG00001008450) #9	Or8s5 (ENSCGRG00001007209) #11	Or8s2 (ENSCGRG00001008762) #12	Or8s10 (ENSCGRG00001009319) #13	Or8s8 (ENSCGRG00001010259) #14	ENSCGRG00001004394 #15	Lalba (ENSCGRG00001004333) #16	Or11m3 (ENSCGRG00001010245) #17	Kansl2 (ENSCGRG00001007756) #18	Ccnt1 (ENSCGRG00001010472) #19	Tex49 (ENSCGRG00001002641) #20	Adcy6 (ENSCGRG00001002443) #21	Cacnb3 (ENSCGRG00001007469) #22	Ddx23 (ENSCGRG00001015090) #23	Rnd1 (ENSCGRG00001004988) #24	Ccdc65 (ENSCGRG00001014624) #25	Fkbp11 (ENSCGRG00001012678) #26	Arf3 (ENSCGRG00001004437) #27	Wnt10b (ENSCGRG00001004015) #28	Wnt1 (ENSCGRG00001003166) #29	Ddn (ENSCGRG00001004300) #30	Prkag1 (ENSCGRG00001003063) #32	Kmt2d (ENSCGRG00001004692) #31	Rhebl1 (ENSCGRG00001005736) #33	Dhh (ENSCGRG00001012548) #34	Lmbr1l (ENSCGRG00001008575) #35	ENSCGRG00001011667 ##36	ENSCGRG00001007551 ##36
Cricetidae_B	ANCESTRAL SPECIES	6	ENSGT01100000263574.a.f.a #7	ENSGT01100000263574.a.f.b ##7	ENSGT00940000162121 #9	ENSGT00940000162202.C #10	ENSGT00940000162202.B #11	ENSGT00940000162202.A #12	ENSGT00940000162388.A #13	ENSGT00940000162388.B #14	ENSGT00940000163803 #15	ENSGT00940000161726 #16	ENSGT00940000165147 #17	ENSGT00940000155808 #18	ENSGT00940000159544 #19	ENSGT00390000010327 #20	ENSGT00940000155687 #21	ENSGT00950000182837.b.a #22	ENSGT00940000155606.b #23	ENSGT00940000158666 #24	ENSGT00940000153804.B #25	ENSGT00940000159521 #26	ENSGT00950000183080.a.a #27	ENSGT00940000160653 #28	ENSGT00940000160329 #29	ENSGT00390000016495 #30	ENSGT00950000183019.f.b.a #32	ENSGT00940000156707 #31	ENSGT00940000161665 #33	ENSGT00940000161132 #34	ENSGT00390000007809.a #35	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #36	ENSGT00940000160203
Prairie vole	MODERN SPECIES	2	ENSMOCG00000002706	ENSMOCG00000015383	Pfkm (ENSMOCG00000021333)	Asb8 (ENSMOCG00000017776)	Ccdc184 (ENSMOCG00000003788)	ENSMOCG00000001175 #7	ENSMOCG00000001245 ##7	Zfp641 (ENSMOCG00000019174) #9	ENSMOCG00000017621 #8	ENSMOCG00000009420	Lalba (ENSMOCG00000018652) #16	Kansl2 (ENSMOCG00000010801) #18	Ccnt1 (ENSMOCG00000012712) #19	Tex49 (ENSMOCG00000022816) #20	Adcy6 (ENSMOCG00000013100) #21	Cacnb3 (ENSMOCG00000007254) #22	Ddx23 (ENSMOCG00000018987) #23	Rnd1 (ENSMOCG00000015821) #24	Ccdc65 (ENSMOCG00000000518) #25	Fkbp11 (ENSMOCG00000021965) #26	Arf3 (ENSMOCG00000020182) #27	Wnt10b (ENSMOCG00000021764) #28	Wnt1 (ENSMOCG00000017789) #29	Ddn (ENSMOCG00000016200) #30	Prkag1 (ENSMOCG00000014481) #32	ENSMOCG00000010694 #31	ENSMOCG00000016455 #31	Rhebl1 (ENSMOCG00000004742) #33	Dhh (ENSMOCG00000000393) #34	Lmbr1l (ENSMOCG00000012252) #35	Tuba1c (ENSMOCG00000011887) #36
Northern American deer mouse	MODERN SPECIES	12	ENSPEMG00000030364 ##7	Zfp641 (ENSPEMG00000026282) #9	ENSPEMG00000012906 #10	Or8s5 (ENSPEMG00000026513) #11	Or8s2 (ENSPEMG00000026284) #12	ENSPEMG00000028993	Or8s10 (ENSPEMG00000027490) #13	Or8s8 (ENSPEMG00000030973) #14	ENSPEMG00000029296 #15	Lalba (ENSPEMG00000007983) #16	Or11m3 (ENSPEMG00000024651) #17	Kansl2 (ENSPEMG00000008795) #18	Ccnt1 (ENSPEMG00000016743) #19	Tex49 (ENSPEMG00000000495) #20	Adcy6 (ENSPEMG00000009690) #21	Cacnb3 (ENSPEMG00000014805) #22	Ddx23 (ENSPEMG00000011305) #23	Rnd1 (ENSPEMG00000014224) #24	Ccdc65 (ENSPEMG00000007520) #25	Fkbp11 (ENSPEMG00000009775) #26	Arf3 (ENSPEMG00000028616) #27	Wnt10b (ENSPEMG00000015297) #28	Wnt1 (ENSPEMG00000024721) #29	Ddn (ENSPEMG00000010537) #30	Prkag1 (ENSPEMG00000015142) #32	ENSPEMG00000015938 #31	ENSPEMG00000015247 #31	Rhebl1 (ENSPEMG00000018904) #33	Dhh (ENSPEMG00000029701) #34	ENSPEMG00000029758 #36	Tuba1c (ENSPEMG00000025359) #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	1666									ENSNGAG00000014255	Lalba (ENSNGAG00000019393) #16	Or11m3 (ENSNGAG00000018584) #17	Kansl2 (ENSNGAG00000001029) #18	Ccnt1 (ENSNGAG00000004672) #19	Tex49 (ENSNGAG00000008742) #20	Adcy6 (ENSNGAG00000010902) #21	Cacnb3 (ENSNGAG00000017756) #22	Ddx23 (ENSNGAG00000019018) #23	Rnd1 (ENSNGAG00000001259) #24	Ccdc65 (ENSNGAG00000008161) #25	ENSNGAG00000015440 #26	Arf3 (ENSNGAG00000015800) #27	Wnt10b (ENSNGAG00000004862) #28	Wnt1 (ENSNGAG00000007571) #29	Ddn (ENSNGAG00000008326) #30	Prkag1 (ENSNGAG00000012811) #32	ENSNGAG00000012125 #31	ENSNGAG00000012838 #31	Rhebl1 (ENSNGAG00000015540) #33	Dhh (ENSNGAG00000018490) #34	Lmbr1l (ENSNGAG00000000187) #35
Lesser Egyptian jerboa	MODERN SPECIES	157	Senp1 (ENSJJAG00000015040)	Pfkm (ENSJJAG00000021525)	ENSJJAG00000023643	Ccdc184 (ENSJJAG00000014181)	ENSJJAG00000023686	ENSJJAG00000014189	Zfp641 (ENSJJAG00000023912) #9	ENSJJAG00000001609 #10	ENSJJAG00000003638	Lalba (ENSJJAG00000011329) #16	ENSJJAG00000013730	Kansl2 (ENSJJAG00000012644) #18	Ccnt1 (ENSJJAG00000014633) #19	Tex49 (ENSJJAG00000014955) #20	Adcy6 (ENSJJAG00000016023) #21	Cacnb3 (ENSJJAG00000017876) #22	Ddx23 (ENSJJAG00000018994) #23	Rnd1 (ENSJJAG00000018029) #24	Ccdc65 (ENSJJAG00000018310) #25	Fkbp11 (ENSJJAG00000019024) #26	Arf3 (ENSJJAG00000019531) #27	Wnt10b (ENSJJAG00000019751) #28	Wnt1 (ENSJJAG00000019856) #29	Ddn (ENSJJAG00000020419) #30	Prkag1 (ENSJJAG00000021260) #32	ENSJJAG00000021738 #31	ENSJJAG00000023190	ENSJJAG00000023273 #31	Dhh (ENSJJAG00000000231) #34	ENSJJAG00000000483 #35	Tuba1b (ENSJJAG00000003271) #36
Kangaroo rat	MODERN SPECIES	361	Col2a1 (ENSDORG00000012020)	Senp1 (ENSDORG00000000092)	Pfkm (ENSDORG00000000094)	Asb8 (ENSDORG00000027268)	Ccdc184 (ENSDORG00000000096)	ENSDORG00000027511 #7	ENSDORG00000027881 #7	Zfp641 (ENSDORG00000011810) #9	ENSDORG00000025213 #10	ENSDORG00000002609	Lalba (ENSDORG00000009838) #16	Kansl2 (ENSDORG00000001180) #18	Ccnt1 (ENSDORG00000002854) #19	Tex49 (ENSDORG00000023756) #20	Adcy6 (ENSDORG00000005171) #21	Cacnb3 (ENSDORG00000012657) #22	Ddx23 (ENSDORG00000012659) #23	Rnd1 (ENSDORG00000023400) #24	Ccdc65 (ENSDORG00000012748) #25	Arf3 (ENSDORG00000024681) #27	Wnt10b (ENSDORG00000010403) #28	Wnt1 (ENSDORG00000007735) #29	Ddn (ENSDORG00000028862) #30	Prkag1 (ENSDORG00000006505) #32	ENSDORG00000024758 #31	ENSDORG00000027776 #31	Rhebl1 (ENSDORG00000006513) #33	Dhh (ENSDORG00000024818) #34	ENSDORG00000008221 #35	ENSDORG00000000156	Tuba1a (ENSDORG00000006812) ##36
Rodentia_A	ANCESTRAL SPECIES	4	ENSGT00730000111596 #8	ENSGT00940000162121 #9	ENSGT00940000162202.C #10	ENSGT00940000162202.B #11	ENSGT00940000162202.A #12	ENSGT00390000014843	ENSGT00940000159881.a.a.b	ENSGT00940000162388.B #14	ENSGT00940000163803 #15	ENSGT00940000161726 #16	ENSGT00940000165147 #17	ENSGT00940000155808 #18	ENSGT00940000159544 #19	ENSGT00390000010327 #20	ENSGT00940000155687 #21	ENSGT00950000182837.b.a #22	ENSGT00940000155606.b #23	ENSGT00940000158666 #24	ENSGT00940000153804.B #25	ENSGT00940000159521 #26	ENSGT00950000183080.a.a #27	ENSGT00940000160653 #28	ENSGT00940000160329 #29	ENSGT00390000016495 #30	ENSGT00950000183019.f.b.a #32	ENSGT00940000156707 #31	ENSGT00940000161665 #33	ENSGT00940000161132 #34	ENSGT00390000007809.a #35	ENSGT00950000182825.A.a.b.a.b.a.b.b.b ##36	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #36
Hystricomorpha	ANCESTRAL SPECIES	9	ENSGT01100000263574.a #7	ENSGT00730000111596 #8	ENSGT00940000162121 #9	ENSGT00940000162202.B #11	ENSGT00940000162202.A #12	ENSGT00390000014843	ENSGT00940000159881.a.a.b	ENSGT00940000162388.B #14	ENSGT00940000163803 #15	ENSGT00940000161726 #16	ENSGT00940000165147 #17	ENSGT00940000155808 #18	ENSGT00940000159544 #19	ENSGT00390000010327 #20	ENSGT00940000155687 #21	ENSGT00950000182837.b.a #22	ENSGT00940000155606.b #23	ENSGT00940000158666 #24	ENSGT00940000153804.B #25	ENSGT00940000159521 #26	ENSGT00950000183080.a.a #27	ENSGT00940000160653 #28	ENSGT00940000160329 #29	ENSGT00390000016495 #30	ENSGT00950000183019.f.b.a #32	ENSGT00940000156707 #31	ENSGT00940000161665 #33	ENSGT00940000161132 #34	ENSGT00390000007809.a #35	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #36	ENSGT00950000182825.A.a.b.a.b.a.b.a.b ##36
Naked mole-rat female	MODERN SPECIES	8	ZNF641 (ENSHGLG00000048585) #9	ENSHGLG00000047797 #10	ENSHGLG00000034108 #11	ENSHGLG00000036300 #12	ENSHGLG00000047106	ENSHGLG00000020517 #14	ENSHGLG00000020586	OR5BS1P (ENSHGLG00000042484) #15	ENSHGLG00000004311 #16	ENSHGLG00000050339	ENSHGLG00000033115	ENSHGLG00000003714 #18	ENSHGLG00000003361 #19	TEX49 (ENSHGLG00000007195) #20	ADCY6 (ENSHGLG00000004662) #21	CACNB3 (ENSHGLG00000007792) #22	DDX23 (ENSHGLG00000004292) #23	RND1 (ENSHGLG00000004112) #24	ENSHGLG00000048199	CCDC65 (ENSHGLG00000003786) #25	FKBP11 (ENSHGLG00000008146) #26	ARF3 (ENSHGLG00000050677) #27	WNT10B (ENSHGLG00000005760) #28	WNT1 (ENSHGLG00000004305) #29	DDN (ENSHGLG00000004151) #30	PRKAG1 (ENSHGLG00000003937) #32	ENSHGLG00000050567 #31	RHEBL1 (ENSHGLG00000013261) #33	DHH (ENSHGLG00000034254) #34	LMBR1L (ENSHGLG00000014791) #35	ENSHGLG00000046022
Hystricomorpha_a	ANCESTRAL SPECIES	7	ENSGT01100000263574.a #7	ENSGT00940000162121 #9	ENSGT00940000162202.B #11	ENSGT00940000162202.A #12	ENSGT00390000014843	ENSGT00940000164920	ENSGT00940000159881.a.a.b	ENSGT00940000162388.B #14	ENSGT00940000163803 #15	ENSGT00940000161726 #16	ENSGT00940000165147 #17	ENSGT00940000155808 #18	ENSGT00940000159544 #19	ENSGT00390000010327 #20	ENSGT00940000155687 #21	ENSGT00950000182837.b.a #22	ENSGT00940000155606.b #23	ENSGT00940000158666 #24	ENSGT00940000153804.B #25	ENSGT00940000159521 #26	ENSGT00950000183080.a.a #27	ENSGT00940000160653 #28	ENSGT00940000160329 #29	ENSGT00390000016495 #30	ENSGT00950000183019.f.b.a #32	ENSGT00940000156707 #31	ENSGT00940000161665 #33	ENSGT00940000161132 #34	ENSGT00390000007809.a #35	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #36	ENSGT00940000154457.a.b
Guinea pig	MODERN SPECIES	9	ENSCPOG00000012386 #7	ZNF641 (ENSCPOG00000002770) #9	ENSCPOG00000036505 #11	ENSCPOG00000012475 #12	ENSCPOG00000040584	ENSCPOG00000039913 #15	ENSCPOG00000013910 #14	ENSCPOG00000000012	ENSCPOG00000033889 #15	Lalba (ENSCPOG00000027342) #16	ENSCPOG00000024843 #17	KANSL2 (ENSCPOG00000005760) #18	CCNT1 (ENSCPOG00000038705) #19	TEX49 (ENSCPOG00000030293) #20	ADCY6 (ENSCPOG00000030377) #21	CACNB3 (ENSCPOG00000003277) #22	DDX23 (ENSCPOG00000003278) #23	RND1 (ENSCPOG00000003220) #24	CCDC65 (ENSCPOG00000003221) #25	FKBP11 (ENSCPOG00000031801) #26	ARF3 (ENSCPOG00000040787) #27	WNT10B (ENSCPOG00000035034) #28	WNT1 (ENSCPOG00000024490) #29	DDN (ENSCPOG00000002960) #30	PRKAG1 (ENSCPOG00000002966) #32	KMT2D (ENSCPOG00000002973) #31	RHEBL1 (ENSCPOG00000002998) #33	DHH (ENSCPOG00000002257) #34	LMBR1L (ENSCPOG00000002999) #35	TUBA1B (ENSCPOG00000039484) #36	ENSCPOG00000031519
Hystricomorpha_b	ANCESTRAL SPECIES	78	ENSGT00940000155489.b.f	ENSGT00940000155440.d	ENSGT00940000159366	ENSGT00390000002978	ENSGT01100000263574.a #7	ENSGT00940000162121 #9	ENSGT00940000162202.B #11	ENSGT00940000162202.A #12	ENSGT00390000014843	ENSGT00940000164920	ENSGT00940000161726 #16	ENSGT00940000155808.c #18	ENSGT00940000159544 #19	ENSGT00390000010327 #20	ENSGT00940000155687 #21	ENSGT00950000182837.b.a #22	ENSGT00940000155606.b #23	ENSGT00940000158666 #24	ENSGT00940000153804.B #25	ENSGT00940000159521 #26	ENSGT00950000183080.a.a #27	ENSGT00940000160653 #28	ENSGT00940000160329 #29	ENSGT00390000016495 #30	ENSGT00950000183019.f.b.a #32	ENSGT00940000156707 #31	ENSGT00940000161665 #33	ENSGT00940000161132 #34	ENSGT00390000007809.a #35	ENSGT00950000182825.A.a.b.a.b.a.b.b.a ##36	ENSGT00940000160203
Long-tailed chinchilla	MODERN SPECIES	207	SENP1 (ENSCLAG00000015346)	PFKM (ENSCLAG00000003014)	ASB8 (ENSCLAG00000003759)	CCDC184 (ENSCLAG00000017612)	OR10AD1 (ENSCLAG00000002006) #7	ZNF641 (ENSCLAG00000002291) #9	ENSCLAG00000002661 #11	ENSCLAG00000017498 #12	C12orf54 (ENSCLAG00000002462)	ENSCLAG00000017542 #14	LALBA (ENSCLAG00000002878) #16	ENSCLAG00000003022 #18	CCNT1 (ENSCLAG00000003430) #19	TEX49 (ENSCLAG00000003509) #20	ADCY6 (ENSCLAG00000003898) #21	CACNB3 (ENSCLAG00000002138) #22	DDX23 (ENSCLAG00000002986) #23	RND1 (ENSCLAG00000003094) #24	CCDC65 (ENSCLAG00000002533) #25	ENSCLAG00000003008 #26	ARF3 (ENSCLAG00000003101) #27	WNT10B (ENSCLAG00000002817) #28	WNT1 (ENSCLAG00000002943) #29	DDN (ENSCLAG00000003076) #30	PRKAG1 (ENSCLAG00000003459) #32	KMT2D (ENSCLAG00000003665) #31	RHEBL1 (ENSCLAG00000002358) #33	DHH (ENSCLAG00000003629) #34	LMBR1L (ENSCLAG00000004048) #35	ENSCLAG00000004794 ##36	PRPH (ENSCLAG00000003332)
Degu	MODERN SPECIES	141	SENP1 (ENSODEG00000004260)	PFKM (ENSODEG00000004315)	ASB8 (ENSODEG00000004323)	CCDC184 (ENSODEG00000019270)	ENSODEG00000003231	ENSODEG00000003244	ZNF641 (ENSODEG00000003266) #9	ENSODEG00000003293 #12	ENSODEG00000003309	LALBA (ENSODEG00000003342) #16	ENSODEG00000003381 #18	ENSODEG00000003425 #19	TEX49 (ENSODEG00000003431) #20	ENSODEG00000003445	ADCY6 (ENSODEG00000003474) #21	CACNB3 (ENSODEG00000003562) #22	DDX23 (ENSODEG00000003592) #23	RND1 (ENSODEG00000003618) #24	CCDC65 (ENSODEG00000003640) #25	FKBP11 (ENSODEG00000003672) #26	ARF3 (ENSODEG00000004009) #27	WNT10B (ENSODEG00000004020) #28	WNT1 (ENSODEG00000004027) #29	DDN (ENSODEG00000004034) #30	ENSODEG00000004046 #32	ENSODEG00000004064 #31	ENSODEG00000004083 #31	RHEBL1 (ENSODEG00000004107) #33	DHH (ENSODEG00000004129) #34	LMBR1L (ENSODEG00000004152) #35	ENSODEG00000004198
Sciuridae	ANCESTRAL SPECIES	15	ENSGT01100000263574.a #7	ENSGT00730000111596 #8	ENSGT00940000162121 #9	ENSGT00940000162202.C #10	ENSGT00940000162202.B #11	ENSGT00940000162202.A #12	ENSGT00390000014843	ENSGT00940000162388.B #14	ENSGT00940000163803 #15	ENSGT00940000161726 #16	ENSGT00940000165147 #17	ENSGT00940000155808 #18	ENSGT00940000159544 #19	ENSGT00390000010327 #20	ENSGT00940000155687 #21	ENSGT00950000182837.b.a #22	ENSGT00940000155606.b #23	ENSGT00940000158666 #24	ENSGT00940000153804.B #25	ENSGT00940000159521 #26	ENSGT00950000183080.a.a #27	ENSGT00940000160653 #28	ENSGT00940000160329 #29	ENSGT00390000016495 #30	ENSGT00950000183019.f.b.a #32	ENSGT00940000156707 #31	ENSGT00940000161665 #33	ENSGT00940000161132 #34	ENSGT00390000007809.a #35	ENSGT00950000182825.A.a.b.a.b.a.b.b.b ##36	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #36
Marmotini	ANCESTRAL SPECIES	19	ENSGT01100000263574.a.g #7	ENSGT00730000111596 #8	ENSGT00940000162121 #9	ENSGT00940000162202.C #10	ENSGT00940000162202.B #11	ENSGT00940000162202.A #12	ENSGT00940000159881.a.b.a	ENSGT00940000162388.B #14	ENSGT00940000163803 #15	ENSGT00940000161726 #16	ENSGT00940000165147 #17	ENSGT00940000155808 #18	ENSGT00940000159544 #19	ENSGT00390000010327 #20	ENSGT00940000155687 #21	ENSGT00950000182837.b.a #22	ENSGT00940000155606.b #23	ENSGT00940000158666 #24	ENSGT00940000153804.B #25	ENSGT00940000159521 #26	ENSGT00950000183080.a.a #27	ENSGT00940000160653 #28	ENSGT00940000160329 #29	ENSGT00390000016495 #30	ENSGT00950000183019.f.b.a #32	ENSGT00940000156707 #31	ENSGT00940000161665 #33	ENSGT00940000161132 #34	ENSGT00390000007809.a #35	ENSGT00950000182825.A.a.b.a.b.a.b.b.b ##36	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #36
Marmotini_b	ANCESTRAL SPECIES	11	ENSGT01100000263574.a.g #7	ENSGT00730000111596 #8	ENSGT00940000162121 #9	ENSGT00940000162202.C #10	ENSGT00940000162202.B #11	ENSGT00940000162202.A #12	ENSGT00940000159881.a.b.a	ENSGT00940000162388.B #14	ENSGT00940000163803 #15	ENSGT00940000161726 #16	ENSGT00940000165147 #17	ENSGT00940000155808 #18	ENSGT00940000159544 #19	ENSGT00390000010327 #20	ENSGT00940000155687 #21	ENSGT00950000182837.b.a #22	ENSGT00940000155606.b #23	ENSGT00940000158666 #24	ENSGT00940000153804.B #25	ENSGT00940000159521 #26	ENSGT00950000183080.a.a #27	ENSGT00940000160653 #28	ENSGT00940000160329 #29	ENSGT00390000016495 #30	ENSGT00950000183019.f.b.a #32	ENSGT00940000156707 #31	ENSGT00940000161665 #33	ENSGT00940000161132 #34	ENSGT00390000007809.a #35	ENSGT00950000182825.A.a.b.a.b.a.b.b.b ##36	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #36
Arctic ground squirrel	MODERN SPECIES	348									OR5BS1P (ENSUPAG00010008767) #15	LALBA (ENSUPAG00010008774) #16	ENSUPAG00010008799	KANSL2 (ENSUPAG00010008805) #18	CCNT1 (ENSUPAG00010008871) #19	TEX49 (ENSUPAG00010008891) #20	ADCY6 (ENSUPAG00010008904) #21	CACNB3 (ENSUPAG00010008993) #22	DDX23 (ENSUPAG00010009132) #23	RND1 (ENSUPAG00010009175) #24	CCDC65 (ENSUPAG00010009212) #25	FKBP11 (ENSUPAG00010009234) #26	ARF3 (ENSUPAG00010009256) #27	WNT10B (ENSUPAG00010009270) #28	WNT1 (ENSUPAG00010009320) #29	DDN (ENSUPAG00010009325) #30	PRKAG1 (ENSUPAG00010009337) #32	RHEBL1 (ENSUPAG00010009539) #33	DHH (ENSUPAG00010009573) #34	LMBR1L (ENSUPAG00010009579) #35	TUBA1B (ENSUPAG00010009604) #36	TUBA1C (ENSUPAG00010009626) #36	PRPH (ENSUPAG00010009633)
Squirrel	MODERN SPECIES	112	PFKM (ENSSTOG00000001938)	ASB8 (ENSSTOG00000024076)	CCDC184 (ENSSTOG00000001957)	OR10AD1 (ENSSTOG00000001963) #7	ZNF641 (ENSSTOG00000001970) #9	ENSSTOG00000033341 #10	ENSSTOG00000005852	ENSSTOG00000033401	ENSSTOG00000032648 #14	LALBA (ENSSTOG00000033863) #16	ENSSTOG00000019743 #17	KANSL2 (ENSSTOG00000004118) #18	CCNT1 (ENSSTOG00000021508) #19	TEX49 (ENSSTOG00000004134) #20	ADCY6 (ENSSTOG00000004149) #21	CACNB3 (ENSSTOG00000004199) #22	DDX23 (ENSSTOG00000004219) #23	RND1 (ENSSTOG00000004257) #24	CCDC65 (ENSSTOG00000004267) #25	FKBP11 (ENSSTOG00000023089) #26	ARF3 (ENSSTOG00000004295) #27	WNT10B (ENSSTOG00000004303) #28	WNT1 (ENSSTOG00000003902) #29	DDN (ENSSTOG00000028408) #30	PRKAG1 (ENSSTOG00000014648) #32	KMT2D (ENSSTOG00000003904) #31	RHEBL1 (ENSSTOG00000003967) #33	DHH (ENSSTOG00000000186) #34	LMBR1L (ENSSTOG00000008752) #35	TUBA1A (ENSSTOG00000033698) ##36	TUBA1B (ENSSTOG00000021170) #36
Alpin marmot	MODERN SPECIES	34	ENSMMMG00000022866 #7	ENSMMMG00000022868 #7	H1-7 (ENSMMMG00000022871) #8	ZNF641 (ENSMMMG00000022873) #9	ENSMMMG00000022878 #10	ENSMMMG00000022881 #11	ENSMMMG00000022885 #12	ENSMMMG00000022886	ENSMMMG00000022889 #14	OR5BS1P (ENSMMMG00000022891) #15	LALBA (ENSMMMG00000022893) #16	KANSL2 (ENSMMMG00000022904) #18	CCNT1 (ENSMMMG00000022910) #19	TEX49 (ENSMMMG00000022917) #20	ADCY6 (ENSMMMG00000022920) #21	CACNB3 (ENSMMMG00000022935) #22	DDX23 (ENSMMMG00000022958) #23	RND1 (ENSMMMG00000022971) #24	CCDC65 (ENSMMMG00000022974) #25	FKBP11 (ENSMMMG00000022980) #26	WNT10B (ENSMMMG00000022992) #28	DDN (ENSMMMG00000023006) #30	ENSMMMG00000023013 #32	ENSMMMG00000023022 #31	ENSMMMG00000023038 #31	RHEBL1 (ENSMMMG00000023043) #33	DHH (ENSMMMG00000023054) #34	LMBR1L (ENSMMMG00000023056) #35	TUBA1A (ENSMMMG00000023062) ##36	TUBA1C (ENSMMMG00000023064) #36	PRPH (ENSMMMG00000023068)
Eurasian red squirrel	MODERN SPECIES	14	ASB8 (ENSSVLG00005010618)	CCDC184 (ENSSVLG00005010675)	OR10AD1 (ENSSVLG00005010756) #7	H1-7 (ENSSVLG00005010817) #8	ZNF641 (ENSSVLG00005010861) #9	ENSSVLG00005010951 #12	C12orf54 (ENSSVLG00005011007)	OR5BS1P (ENSSVLG00005011139) #15	LALBA (ENSSVLG00005011187) #16	ENSSVLG00005011295	ENSSVLG00005011395	KANSL2 (ENSSVLG00005011410) #18	CCNT1 (ENSSVLG00005011525) #19	TEX49 (ENSSVLG00005011832) #20	ADCY6 (ENSSVLG00005011914) #21	CACNB3 (ENSSVLG00005012131) #22	DDX23 (ENSSVLG00005012479) #23	RND1 (ENSSVLG00005012510) #24	CCDC65 (ENSSVLG00005012567) #25	FKBP11 (ENSSVLG00005012794) #26	ARF3 (ENSSVLG00005012987) #27	WNT10B (ENSSVLG00005013159) #28	WNT1 (ENSSVLG00005013249) #29	DDN (ENSSVLG00005013335) #30	PRKAG1 (ENSSVLG00005013661) #32	ENSSVLG00005013748 #31	ENSSVLG00005013789 #31	RHEBL1 (ENSSVLG00005013912) #33	DHH (ENSSVLG00005013965) #34	LMBR1L (ENSSVLG00005014035) #35	TUBA1B (ENSSVLG00005014122) #36
Lagomorpha	ANCESTRAL SPECIES	81										ENSGT00390000014843	ENSGT00940000161726 #16	ENSGT00940000155808 #18	ENSGT00940000159544 #19	ENSGT00390000010327 #20	ENSGT00940000155687 #21	ENSGT00950000182837.b.a #22	ENSGT00940000155606.b #23	ENSGT00940000158666 #24	ENSGT00940000153804.B #25	ENSGT00940000159521 #26	ENSGT00950000183080.a.a #27	ENSGT00940000160653 #28	ENSGT00940000160329 #29	ENSGT00390000016495 #30	ENSGT00950000183019.f.b.a.k #32	ENSGT00940000156707 #31	ENSGT00940000161665 #33	ENSGT00940000161132 #34	ENSGT00390000007809.a #35	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b #36	ENSGT00940000154457.a.a
Rabbit	MODERN SPECIES	15	ENSOCUG00000030542	PLCB1 (ENSOCUG00000007339)	ENSOCUG00000038367	TMX4 (ENSOCUG00000007336)	HAO1 (ENSOCUG00000011539)	BMP2 (ENSOCUG00000011674)	ENSOCUG00000021510 #12	ENSOCUG00000030065	ENSOCUG00000038424	ENSOCUG00000008989	LYZG (ENSOCUG00000015834) #16	KANSL2 (ENSOCUG00000007379) #18	CCNT1 (ENSOCUG00000007383) #19	ADCY6 (ENSOCUG00000007394) #21	TEX49 (ENSOCUG00000007390) #20	CACNB3 (ENSOCUG00000007401) #22	DDX23 (ENSOCUG00000001414) #23	RND1 (ENSOCUG00000025362) #24	ENSOCUG00000035268 #25	CCDC65 (ENSOCUG00000026025) #25	ENSOCUG00000009574 #26	ARF3 (ENSOCUG00000039073) #27	WNT10B (ENSOCUG00000009580) #28	WNT1 (ENSOCUG00000026066) #29	DDN (ENSOCUG00000008404) #30	ENSOCUG00000008409 #32	KMT2D (ENSOCUG00000006202) #31	RHEBL1 (ENSOCUG00000016881) #33	DHH (ENSOCUG00000029219) #34	LMBR1L (ENSOCUG00000011586) #35	ENSOCUG00000027812 #36
Pika	MODERN SPECIES	1640													ENSOPRG00000007102 #18	CCNT1 (ENSOPRG00000007114) #19	ADCY6 (ENSOPRG00000007130) #21	CACNB3 (ENSOPRG00000007154) #22	ENSOPRG00000007170 #23