Pecora	ANCESTRAL SPECIES	8	ENSGT00390000007772.db.d ##7	ENSGT00390000007772.eb #7	ENSGT00390000006095 #8	ENSGT00900000141083.d #9	ENSGT00940000160165 #10	ENSGT00940000159675	ENSGT00950000183179.b.b #11	ENSGT00950000183086.a.a.b #12	ENSGT00530000064220 #13	ENSGT00940000154369.d ##15	ENSGT01030000234629.C #16	ENSGT00390000016324 #18	ENSGT00940000161449 #19	ENSGT00940000158201 #20	ENSGT00940000155481 #21	ENSGT00940000160511 #22	ENSGT01030000234579.A.b.eb #23	ENSGT00390000018318.u.b.a.b.a.a.b #24	ENSGT00990000212240	ENSGT00940000157909 #25	ENSGT01000000214434.A #26	ENSGT00670000098080 #27	ENSGT00940000155714 #28	ENSGT00950000183097.a.b #29	ENSGT01060000248594.f #30	ENSGT00940000157649 #31	ENSGT00940000162334 #32	ENSGT00390000010687.a.a #33	ENSGT00940000161292 #34	ENSGT00940000160094 #37	ENSGT00520000055625.b
Percora_a	ANCESTRAL SPECIES	7	ENSGT00390000007772.eb #7	ENSGT00390000006095 #8	ENSGT00900000141083.d #9	ENSGT00940000160165 #10	ENSGT00940000159675	ENSGT00950000183179.b.b #11	ENSGT00950000183086.a.a.b #12	ENSGT00530000064220 #13	ENSGT00940000154369.d.a ##15	ENSGT01030000234629.C #16	ENSGT00910000144184.r #17	ENSGT00390000016324 #18	ENSGT00940000161449 #19	ENSGT00940000158201 #20	ENSGT00940000155481 #21	ENSGT00940000160511 #22	ENSGT01030000234579.A.b.eb #23	ENSGT00390000018318.u.b.a.b.a.a.b #24	ENSGT00990000212240	ENSGT00940000157909 #25	ENSGT01000000214434.A #26	ENSGT00670000098080 #27	ENSGT00940000155714 #28	ENSGT00950000183097.a.b #29	ENSGT01060000248594.f #30	ENSGT00940000157649 #31	ENSGT00940000162334 #32	ENSGT00390000010687.a.a #33	ENSGT00940000161292 #34	ENSGT00940000160094 #37	ENSGT00520000055625.b
Bovidae	ANCESTRAL SPECIES	9	ENSGT00390000007772.eb #7	ENSGT00390000006095 #8	ENSGT00900000141083.d #9	ENSGT00940000160165 #10	ENSGT00940000159675	ENSGT00950000183179.b.b #11	ENSGT00950000183086.a.a.b #12	ENSGT00530000064220 #13	ENSGT00940000154369.d.a ##15	ENSGT01030000234629.C #16	ENSGT00910000144184.r #17	ENSGT00390000016324 #18	ENSGT00940000161449 #19	ENSGT00940000158201 #20	ENSGT00940000155481 #21	ENSGT00940000160511 #22	ENSGT01030000234579.A.b.eb #23	ENSGT00910000147942.a	ENSGT00940000157909 #25	ENSGT01000000214434.A #26	ENSGT00670000098080 #27	ENSGT00940000155714 #28	ENSGT00950000183097.a.b #29	ENSGT01060000248594.f #30	ENSGT00940000157649 #31	ENSGT00940000162334 #32	ENSGT00390000010687.a.a #33	ENSGT00940000161292 #34	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Bovinae	ANCESTRAL SPECIES	6	ENSGT00390000006095 #8	ENSGT00900000141083.d #9	ENSGT00940000160165 #10	ENSGT00940000159675	ENSGT00950000183179.b.b #11	ENSGT00950000183086.a.a.b #12	ENSGT00530000064220 #13	ENSGT00940000154369.d.a ##15	ENSGT01030000234629.C #16	ENSGT00910000144184.r #17	ENSGT00390000016324 #18	ENSGT00940000161449 #19	ENSGT00940000158201 #20	ENSGT00940000171658.a	ENSGT00940000155481 #21	ENSGT00940000160511 #22	ENSGT01030000234579.A.b.eb #23	ENSGT00910000147942.a	ENSGT00940000157909 #25	ENSGT01000000214434.A #26	ENSGT00670000098080 #27	ENSGT00940000155714 #28	ENSGT00950000183097.a.b #29	ENSGT01060000248594.f #30	ENSGT00940000157649 #31	ENSGT00940000153096.b.c.b.b.a.a.a.a.a.a.a	ENSGT00940000162334 #32	ENSGT00390000010687.a.a #33	ENSGT00940000161292 #34	ENSGT00940000160094 #37	ENSGT00520000055625.b
Bos	ANCESTRAL SPECIES	7	ENSGT00390000006095 #8	ENSGT00900000141083.d #9	ENSGT00940000160165 #10	ENSGT00940000159675	ENSGT00950000183179.b.b #11	ENSGT00950000183086.a.a.b #12	ENSGT00530000064220 #13	ENSGT00940000154369.d.a ##15	ENSGT01030000234629.C #16	ENSGT00910000144184.r #17	ENSGT00390000016324 #18	ENSGT00940000161449 #19	ENSGT00940000158201 #20	ENSGT00940000171658.a	ENSGT00940000155481 #21	ENSGT00940000160511 #22	ENSGT00910000147942.a	ENSGT00940000157909 #25	ENSGT01000000214434.A #26	ENSGT00670000098080 #27	ENSGT00940000155714 #28	ENSGT00950000183097.a.b #29	ENSGT01060000248594.f #30	ENSGT00940000157649 #31	ENSGT00940000153096.b.c.b.b.a.a.a.a.a.a.a	ENSGT00940000162334 #32	ENSGT00390000010687.a.a #33	ENSGT00940000161292 #34	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Bos_a	ANCESTRAL SPECIES	5	ENSGT00390000006095 #8	ENSGT00900000141083.d.a #9	ENSGT00940000160165 #10	ENSGT00940000159675	ENSGT00950000183179.b.b #11	ENSGT00950000183086.a.a.b #12	ENSGT00530000064220 #13	ENSGT00940000154369.c.a #15	ENSGT01030000234629.C #16	ENSGT00910000144184.r #17	ENSGT00390000016324 #18	ENSGT00940000161449 #19	ENSGT00940000158201 #20	ENSGT00940000171658.a	ENSGT00940000155481 #21	ENSGT00940000160511 #22	ENSGT01030000234579.A.b.eb #23	ENSGT00390000018318.u.b.a.b.a.a.b #24	ENSGT00940000157909 #25	ENSGT01000000214434.A #26	ENSGT00670000098080 #27	ENSGT00940000155714 #28	ENSGT00950000183097.a.b #29	ENSGT01060000248594.f #30	ENSGT00940000157649 #31	ENSGT00940000153096.b.c.b.b.a.a.a.a.a.a.a	ENSGT00940000162334 #32	ENSGT00390000010687.a.a #33	ENSGT00940000161292 #34	ENSGT00940000160094 #37	ENSGT00520000055625.b
Domestic yak	MODERN SPECIES		ENSBGRG00000001595 #7	MRPS22 (ENSBGRG00000001541) #8	ENSBGRG00000001520 #9	RBP2 (ENSBGRG00000001501) #10	NMNAT3 (ENSBGRG00000001428) #11	CLSTN2 (ENSBGRG00000001375) #12	TRIM42 (ENSBGRG00000001357) #13	ENSBGRG00000001349 #14	SLC25A36 (ENSBGRG00000001317) #15	SPSB4 (ENSBGRG00000001297) #16	ENSBGRG00000001284 #17	PXYLP1 (ENSBGRG00000001263) #18	ZBTB38 (ENSBGRG00000001246) #19	RASA2 (ENSBGRG00000001166) #20	RNF7 (ENSBGRG00000001134) #21	GRK7 (ENSBGRG00000001107) #22	ATP1B3 (ENSBGRG00000001064) #23	ENSBGRG00000001057 #24	TFDP2 (ENSBGRG00000001010) #25	GK5 (ENSBGRG00000000970) #26	XRN1 (ENSBGRG00000000705) #27	ATR (ENSBGRG00000000428) #28	PLS1 (ENSBGRG00000000350) #29	TRPC1 (ENSBGRG00000000286) #30	PCOLCE2 (ENSBGRG00000000254) #31	PAQR9 (ENSBGRG00000000229) #32	U2SURP (ENSBGRG00000000223) #33	CHST2 (ENSBGRG00000000218) #34	ENSBGRG00000000212 #35	ENSBGRG00000000206 #36	SLC9A9 (ENSBGRG00000000195) #37
Wild yak	MODERN SPECIES	182											PXYLP1 (ENSBMUG00000020857) #18	ZBTB38 (ENSBMUG00000020833) #19	RASA2 (ENSBMUG00000020801) #20	ENSBMUG00000020763	RNF7 (ENSBMUG00000020720) #21	GRK7 (ENSBMUG00000020702) #22	ENSBMUG00000020679	ENSBMUG00000020675 #24	TFDP2 (ENSBMUG00000020653) #25	GK5 (ENSBMUG00000020565) #26	XRN1 (ENSBMUG00000020548) #27	ATR (ENSBMUG00000020470) #28	PLS1 (ENSBMUG00000020434) #29	TRPC1 (ENSBMUG00000020407) #30	PCOLCE2 (ENSBMUG00000020376) #31	ENSBMUG00000020362	PAQR9 (ENSBMUG00000020355) #32	U2SURP (ENSBMUG00000020347) #33	CHST2 (ENSBMUG00000020326) #34	SLC9A9 (ENSBMUG00000020313) #37
Bos_b	ANCESTRAL SPECIES	5	ENSGT00390000007772.eb #7	ENSGT00390000006095 #8	ENSGT00900000141083.d #9	ENSGT00940000160165 #10	ENSGT00940000159675	ENSGT00950000183179.b.b #11	ENSGT00950000183086.a.a.b #12	ENSGT00530000064220 #13	ENSGT00940000154369.d.a ##15	ENSGT01030000234629.C #16	ENSGT00910000144184.r #17	ENSGT00390000016324 #18	ENSGT00940000161449 #19	ENSGT00940000158201 #20	ENSGT00940000155481 #21	ENSGT00940000160511 #22	ENSGT01030000234579.A.b.eb #23	ENSGT00390000018318.u.b.a.b.a.a.b #24	ENSGT00940000157909 #25	ENSGT01000000214434.A #26	ENSGT00670000098080 #27	ENSGT00940000155714 #28	ENSGT00950000183097.a.b #29	ENSGT01060000248594.f #30	ENSGT00940000157649 #31	ENSGT00940000153096.b.c.b.b.a.a.a.a.a.a.a	ENSGT00940000162334 #32	ENSGT00390000010687.a.a #33	ENSGT00940000161292 #34	ENSGT00940000160094 #37	ENSGT00520000055625.b
Cow	MODERN SPECIES		MRPS22 (ENSBTAG00000047608) #8	COPB2 (ENSBTAG00000014843) #9	RBP2 (ENSBTAG00000015056) #10	RBP1 (ENSBTAG00000020028)	NMNAT3 (ENSBTAG00000051936) #11	CLSTN2 (ENSBTAG00000008714) #12	TRIM42 (ENSBTAG00000018346) #13	ENSBTAG00000052041	SLC25A36 (ENSBTAG00000015310) ##15	SPSB4 (ENSBTAG00000009115) #16	ENSBTAG00000050470 #17	PXYLP1 (ENSBTAG00000050763) #18	ZBTB38 (ENSBTAG00000040061) #19	RASA2 (ENSBTAG00000015413) #20	RNF7 (ENSBTAG00000002185) #21	GRK7 (ENSBTAG00000021886) #22	ATP1B3 (ENSBTAG00000014140) #23	ENSBTAG00000019007 #24	TFDP2 (ENSBTAG00000006222) #25	GK5 (ENSBTAG00000018138) #26	XRN1 (ENSBTAG00000011524) #27	ATR (ENSBTAG00000011529) #28	PLS1 (ENSBTAG00000023429) #29	TRPC1 (ENSBTAG00000002232) #30	PCOLCE2 (ENSBTAG00000016026) #31	ENSBTAG00000038111	PAQR9 (ENSBTAG00000011116) #32	U2SURP (ENSBTAG00000009154) #33	CHST2 (ENSBTAG00000011584) #34	ENSBTAG00000054067	SLC9A9 (ENSBTAG00000031178) #37
Hybrid Bos Indicus	MODERN SPECIES		ENSBIXG00005005148 ##7	ENSBIXG00005029095 #7	MRPS22 (ENSBIXG00005005189) #8	COPB2 (ENSBIXG00005001816) #9	RBP2 (ENSBIXG00005001783) #10	ENSBIXG00005029214 #11	CLSTN2 (ENSBIXG00005029240) #12	TRIM42 (ENSBIXG00005001565) #13	SLC25A36 (ENSBIXG00005001539) ##15	SPSB4 (ENSBIXG00005001522) #16	ENSBIXG00005005286 #17	PXYLP1 (ENSBIXG00005029247) #18	ZBTB38 (ENSBIXG00005005290) #19	RASA2 (ENSBIXG00005005293) #20	RNF7 (ENSBIXG00005005297) #21	GRK7 (ENSBIXG00005029666) #22	ATP1B3 (ENSBIXG00005029659) #23	ENSBIXG00005029647 #24	ENSBIXG00005029643 ##36	TFDP2 (ENSBIXG00005029603) #25	GK5 (ENSBIXG00005029572) #26	ENSBIXG00005029562 ##36	XRN1 (ENSBIXG00005029509) #27	ATR (ENSBIXG00005029438) #28	PLS1 (ENSBIXG00005029412) #29	TRPC1 (ENSBIXG00005029391) #30	PCOLCE2 (ENSBIXG00005029362) #31	ENSBIXG00005029331	PAQR9 (ENSBIXG00005029326) #32	U2SURP (ENSBIXG00005029299) #33	CHST2 (ENSBIXG00005029274) #34
American bison	MODERN SPECIES	3298	MRPS22 (ENSBBBG00000016196) #8	COPB2 (ENSBBBG00000016249) #9	RBP2 (ENSBBBG00000016260) #10	ENSBBBG00000016274	NMNAT3 (ENSBBBG00000016315) #11	CLSTN2 (ENSBBBG00000016341) #12	TRIM42 (ENSBBBG00000016347) #13	ENSBBBG00000016376 ##15	SPSB4 (ENSBBBG00000008334) #16	ENSBBBG00000004054 #17	PXYLP1 (ENSBBBG00000016417) #18	ZBTB38 (ENSBBBG00000016426) #19	RASA2 (ENSBBBG00000016517) #20	ENSBBBG00000016540	RNF7 (ENSBBBG00000004080) #21	GRK7 (ENSBBBG00000016561) #22	ATP1B3 (ENSBBBG00000016573) #23	ENSBBBG00000016579	ENSBBBG00000004088 #24	TFDP2 (ENSBBBG00000016664) #25	GK5 (ENSBBBG00000016698) #26	XRN1 (ENSBBBG00000009064) #27	ATR (ENSBBBG00000008122) #28	PLS1 (ENSBBBG00000017029) #29	TRPC1 (ENSBBBG00000008340) #30	PCOLCE2 (ENSBBBG00000017158) #31	ENSBBBG00000017165	PAQR9 (ENSBBBG00000004249) #32	U2SURP (ENSBBBG00000017226) #33	CHST2 (ENSBBBG00000017229) #34	SLC9A9 (ENSBBBG00000017251) #37
Caprinae	ANCESTRAL SPECIES	8	ENSGT00940000157522	ENSGT00390000007772.eb #7	ENSGT00390000006095 #8	ENSGT00900000141083.d #9	ENSGT00940000160165 #10	ENSGT00940000159675	ENSGT00950000183179.b.b #11	ENSGT00950000183086.a.a.b #12	ENSGT00530000064220 #13	ENSGT00940000154369.d.a ##15	ENSGT01030000234629.C #16	ENSGT00390000016324 #18	ENSGT00940000161449 #19	ENSGT00940000158201 #20	ENSGT00940000155481 #21	ENSGT00940000160511 #22	ENSGT01030000234579.A.b.eb.b #23	ENSGT00940000157909 #25	ENSGT01000000214434.A #26	ENSGT00670000098080 #27	ENSGT00940000155714 #28	ENSGT00950000183097.a.b #29	ENSGT01060000248594.f #30	ENSGT00940000157649 #31	ENSGT00940000162334 #32	ENSGT00390000010687.a.a #33	ENSGT00940000161292 #34	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b	ENSGT00940000161947
Rambouillet Sheep	MODERN SPECIES		ENSOARG00020010569 #7	MRPS22 (ENSOARG00020010500) #8	COPB2 (ENSOARG00020010262) #9	RBP2 (ENSOARG00020010203) #10	RBP1 (ENSOARG00020010135)	NMNAT3 (ENSOARG00020009718) #11	CLSTN2 (ENSOARG00020009535) #12	TRIM42 (ENSOARG00020009485) #13	ENSOARG00020009460	SLC25A36 (ENSOARG00020009173) ##15	SPSB4 (ENSOARG00020009123) #16	PXYLP1 (ENSOARG00020008991) #18	ZBTB38 (ENSOARG00020008974) #19	RASA2 (ENSOARG00020008530) #20	RNF7 (ENSOARG00020008414) #21	GRK7 (ENSOARG00020008372) #22	ATP1B3 (ENSOARG00020008329) #23	ENSOARG00020008278	ENSOARG00020008237	TFDP2 (ENSOARG00020007870) #25	ENSOARG00020007831	GK5 (ENSOARG00020007690) #26	XRN1 (ENSOARG00020007309) #27	ATR (ENSOARG00020006427) #28	ENSOARG00020006395	PLS1 (ENSOARG00020006303) #29	TRPC1 (ENSOARG00020006181) #30	PCOLCE2 (ENSOARG00020006072) #31	PAQR9 (ENSOARG00020006055) #32	U2SURP (ENSOARG00020005741) #33	CHST2 (ENSOARG00020005718) #34
Goat	MODERN SPECIES		ENSCHIG00000015101	MRPS22 (ENSCHIG00000027042) #8	COPB2 (ENSCHIG00000022228) #9	RBP2 (ENSCHIG00000027152) #10	RBP1 (ENSCHIG00000020909)	NMNAT3 (ENSCHIG00000026289) #11	CLSTN2 (ENSCHIG00000022240) #12	TRIM42 (ENSCHIG00000015242) #13	ENSCHIG00000022243 ##15	SPSB4 (ENSCHIG00000008629) #16	ENSCHIG00000020425 ##17	PXYLP1 (ENSCHIG00000025350) #18	ZBTB38 (ENSCHIG00000010094) #19	RASA2 (ENSCHIG00000002573) #20	RNF7 (ENSCHIG00000013336) #21	GRK7 (ENSCHIG00000012094) #22	ENSCHIG00000027094 #23	ENSCHIG00000017443	TFDP2 (ENSCHIG00000009621) #25	GK5 (ENSCHIG00000017817) #26	XRN1 (ENSCHIG00000019192) #27	ATR (ENSCHIG00000021916) #28	PLS1 (ENSCHIG00000007676) #29	TRPC1 (ENSCHIG00000020690) #30	PCOLCE2 (ENSCHIG00000024199) #31	PAQR9 (ENSCHIG00000009825) #32	U2SURP (ENSCHIG00000023892) #33	CHST2 (ENSCHIG00000010707) #34	SLC9A9 (ENSCHIG00000013168) #37	DIPK2A (ENSCHIG00000018908)	PLOD2 (ENSCHIG00000018266)
Siberian musk deer	MODERN SPECIES	1183	ENSMMSG00000007679 ##7	ENSMMSG00000007660 #7	MRPS22 (ENSMMSG00000007623) #8	COPB2 (ENSMMSG00000007584) #9	RBP2 (ENSMMSG00000007546) #10	RBP1 (ENSMMSG00000007523)	NMNAT3 (ENSMMSG00000007475) #11	CLSTN2 (ENSMMSG00000007374) #12	TRIM42 (ENSMMSG00000007340) #13	SLC25A36 (ENSMMSG00000007138) ##15	SPSB4 (ENSMMSG00000007102) #16	ENSMMSG00000007071 #17	PXYLP1 (ENSMMSG00000006978) #18	RASA2 (ENSMMSG00000006905) #20	RNF7 (ENSMMSG00000006837) #21	GRK7 (ENSMMSG00000006798) #22	ENSMMSG00000006771 #23	ENSMMSG00000006756	ENSMMSG00000006733	TFDP2 (ENSMMSG00000006589) #25	GK5 (ENSMMSG00000006474) #26	XRN1 (ENSMMSG00000006235) #27	ATR (ENSMMSG00000006162) #28	PLS1 (ENSMMSG00000006112) #29	TRPC1 (ENSMMSG00000006046) #30	PCOLCE2 (ENSMMSG00000005995) #31	PAQR9 (ENSMMSG00000005982) #32	U2SURP (ENSMMSG00000005820) #33	CHST2 (ENSMMSG00000005775) #34	SLC9A9 (ENSMMSG00000005673) #37	DIPK2A (ENSMMSG00000005617)
Yarkand deer	MODERN SPECIES	10	ENSCHYG00000025659	MRPS22 (ENSCHYG00000025593) #8	COPB2 (ENSCHYG00000025389) #9	RBP2 (ENSCHYG00000025312) #10	RBP1 (ENSCHYG00000025267)	ENSCHYG00000025250 #11	CLSTN2 (ENSCHYG00000025188) #12	TRIM42 (ENSCHYG00000025165) #13	ENSCHYG00000025156	SLC25A36 (ENSCHYG00000025011) ##15	SPSB4 (ENSCHYG00000024998) #16	PXYLP1 (ENSCHYG00000024922) #18	ZBTB38 (ENSCHYG00000024909) #19	RASA2 (ENSCHYG00000024595) #20	RNF7 (ENSCHYG00000024540) #21	GRK7 (ENSCHYG00000024502) #22	ENSCHYG00000024452 #23	ENSCHYG00000024429 #24	ENSCHYG00000024409	TFDP2 (ENSCHYG00000024201) #25	GK5 (ENSCHYG00000024077) #26	XRN1 (ENSCHYG00000023362) #27	ATR (ENSCHYG00000022692) #28	PLS1 (ENSCHYG00000022526) #29	TRPC1 (ENSCHYG00000022264) #30	PCOLCE2 (ENSCHYG00000022135) #31	PAQR9 (ENSCHYG00000022114) #32	U2SURP (ENSCHYG00000021811) #33	CHST2 (ENSCHYG00000021770) #34	SLC9A9 (ENSCHYG00000021601) #37	DIPK2A (ENSCHYG00000021529)