Mus	ANCESTRAL SPECIES	5	ENSGT00940000162639	ENSGT00940000159743 #7	ENSGT00940000153677.u.b.b.a.a.b #8	ENSGT00940000163272.a.a.j #9	ENSGT00940000163272.a.b #10	ENSGT00940000159232.h.b #11	ENSGT00940000159232.h.a #12	ENSGT00940000156190.h #13	ENSGT00390000004840 #15	ENSGT00390000012547.b #16	ENSGT00940000156307.b #17	ENSGT00940000159094 #18	ENSGT00940000163272.a.a.i #19	ENSGT00940000156597.b #20	ENSGT00640000091496 #21	ENSGT00390000001447 #22	ENSGT00530000063688.a #23	ENSGT00940000157652 #24	ENSGT01030000234570.d.a #25	ENSGT00530000063186.b.b #26	ENSGT00940000157192 #27	ENSGT00940000154695 #28	ENSGT00390000002231.d.b	ENSGT00940000157137 #29	ENSGT00940000155053 #30	ENSGT00720000108792.B #31	ENSGT00940000156532 #32	ENSGT00940000157295 #33	ENSGT00390000004553 #34	ENSGT00940000155126 #35	ENSGT01050000247708
Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000162639	ENSGT00940000159743 #7	ENSGT00940000153677.u.b.b.a.a.b #8	ENSGT00940000163272.a.a.j #9	ENSGT00940000163272.a.b #10	ENSGT00940000159232.h.b #11	ENSGT00940000159232.h.a #12	ENSGT00940000156190.h #13	ENSGT00390000004840 #15	ENSGT00390000012547.b #16	ENSGT00940000156307.b #17	ENSGT00940000159094 #18	ENSGT00940000163272.a.a.i #19	ENSGT00940000156597.b #20	ENSGT00640000091496 #21	ENSGT00390000001447 #22	ENSGT00530000063688.a #23	ENSGT00940000157652 #24	ENSGT01030000234570.d.a #25	ENSGT00530000063186.b.b #26	ENSGT00940000157192 #27	ENSGT00940000154695 #28	ENSGT00390000002231.d.b	ENSGT00940000157137 #29	ENSGT00940000155053 #30	ENSGT00720000108792.B #31	ENSGT00940000156532 #32	ENSGT00940000157295 #33	ENSGT00390000004553 #34	ENSGT00940000155126 #35	ENSGT01050000247708
Mus_B	ANCESTRAL SPECIES	7	ENSGT00940000162639	ENSGT00940000159743 #7	ENSGT00940000153677.u.b.b.a.a.b #8	ENSGT00940000163272.a.a.j #9	ENSGT00940000163272.a.b #10	ENSGT00940000159232.h.b #11	ENSGT00940000159232.h.a #12	ENSGT00940000156190.h #13	ENSGT00390000004840 #15	ENSGT00390000012547.b #16	ENSGT00940000156307.b #17	ENSGT00940000159094 #18	ENSGT00940000163272.a.a.i #19	ENSGT00940000156597.b #20	ENSGT00640000091496 #21	ENSGT00390000001447 #22	ENSGT00530000063688.a #23	ENSGT00940000157652 #24	ENSGT01030000234570.d.a #25	ENSGT00530000063186.b.b #26	ENSGT00940000157192 #27	ENSGT00940000154695 #28	ENSGT00390000002231.d.b	ENSGT00940000157137 #29	ENSGT00940000155053 #30	ENSGT00720000108792.B #31	ENSGT00940000156532 #32	ENSGT00940000157295 #33	ENSGT00390000004553 #34	ENSGT00940000155126 #35	ENSGT01050000247708
Mouse	MODERN SPECIES		Plekhm3 (ENSMUSG00000051344) #7	Akr1cl (ENSMUSG00000025955) #8	Cryge (ENSMUSG00000070870) #9	Crygd (ENSMUSG00000067299) #10	Crygc (ENSMUSG00000025952) #11	Crygb (ENSMUSG00000073658) #12	Cryga (ENSMUSG00000044429) #13	Gm28845 (ENSMUSG00000100846) #14	D630023F18Rik (ENSMUSG00000044816) #15	Idh1 (ENSMUSG00000025950) #16	Pikfyve (ENSMUSG00000025949) #17	Pth2r (ENSMUSG00000025946) #18	Crygf (ENSMUSG00000025945) #19	Map2 (ENSMUSG00000015222) #20	Unc80 (ENSMUSG00000055567) #21	Rpe (ENSMUSG00000026005) #22	Kansl1l (ENSMUSG00000026004) #23	Acadl (ENSMUSG00000026003) #24	Myl1 (ENSMUSG00000061816) #25	Lancl1 (ENSMUSG00000026000) #26	Cps1 (ENSMUSG00000025991) #27	Erbb4 (ENSMUSG00000062209) #28	Ikzf2 (ENSMUSG00000025997) #29	Spag16 (ENSMUSG00000053153) #30	Vwc2l (ENSMUSG00000045648) #31	Bard1 (ENSMUSG00000026196) #32	Abca12 (ENSMUSG00000050296) #33	Atic (ENSMUSG00000026192) #34	Fn1 (ENSMUSG00000026193) #35	Mreg (ENSMUSG00000039395) #36	Pecr (ENSMUSG00000026189) #37
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000162639	ENSGT00940000159743 #7	ENSGT00940000153677.u.b.b.a.a.b #8	ENSGT00940000163272.a.a.j #9	ENSGT00940000163272.a.b #10	ENSGT00940000159232.h.b #11	ENSGT00940000159232.h.a #12	ENSGT00940000156190.h #13	ENSGT00390000004840 #15	ENSGT00390000012547.b #16	ENSGT00940000156307.b #17	ENSGT00940000159094 #18	ENSGT00940000163272.a.a.i #19	ENSGT00940000156597.b #20	ENSGT00640000091496 #21	ENSGT00390000001447 #22	ENSGT00530000063688.a #23	ENSGT00940000157652 #24	ENSGT01030000234570.d.a #25	ENSGT00530000063186.b.b #26	ENSGT00940000157192 #27	ENSGT00940000154695 #28	ENSGT00390000002231.d.b	ENSGT00940000157137 #29	ENSGT00940000155053 #30	ENSGT00720000108792.B #31	ENSGT00940000156532 #32	ENSGT00940000157295 #33	ENSGT00390000004553 #34	ENSGT00940000155126 #35	ENSGT01050000247708
Steppe mouse	MODERN SPECIES	3325													Crygf (ENSMSIG00000005643) #19	Map2 (ENSMSIG00000005432) #20	Unc80 (ENSMSIG00000004131) #21	Rpe (ENSMSIG00000003962) #22	Kansl1l (ENSMSIG00000003880) #23	Acadl (ENSMSIG00000003848) #24	ENSMSIG00000003762 #25	Lancl1 (ENSMSIG00000003720) #26	Cps1 (ENSMSIG00000003654) #27	Erbb4 (ENSMSIG00000003165) #28	ENSMSIG00000003111	Ikzf2 (ENSMSIG00000002778) #29	ENSMSIG00000002686 #30	ENSMSIG00000002654
spretus	MODERN SPECIES		Plekhm3 (MGP_SPRETEiJ_G0015018) #7	Akr1cl (MGP_SPRETEiJ_G0015019) #8	Cryge (MGP_SPRETEiJ_G0015020) #9	Crygd (MGP_SPRETEiJ_G0015021) #10	Crygc (MGP_SPRETEiJ_G0015022) #11	Crygb (MGP_SPRETEiJ_G0015023) #12	Cryga (MGP_SPRETEiJ_G0015024) #13	MGP_SPRETEiJ_G0015025 #15	MGP_SPRETEiJ_G0015026 #15	Idh1 (MGP_SPRETEiJ_G0015027) #16	Pikfyve (MGP_SPRETEiJ_G0015028) #17	Pth2r (MGP_SPRETEiJ_G0015029) #18	Crygf (MGP_SPRETEiJ_G0015030) #19	Map2 (MGP_SPRETEiJ_G0015031) #20	Unc80 (MGP_SPRETEiJ_G0015032) #21	Rpe (MGP_SPRETEiJ_G0015033) #22	Kansl1l (MGP_SPRETEiJ_G0015034) #23	Acadl (MGP_SPRETEiJ_G0015035) #24	Myl1 (MGP_SPRETEiJ_G0015036) #25	Lancl1 (MGP_SPRETEiJ_G0015037) #26	Cps1 (MGP_SPRETEiJ_G0015038) #27	Erbb4 (MGP_SPRETEiJ_G0015039) #28	Ikzf2 (MGP_SPRETEiJ_G0015040) #29	Spag16 (MGP_SPRETEiJ_G0015041) #30	Vwc2l (MGP_SPRETEiJ_G0015042) #31	Bard1 (MGP_SPRETEiJ_G0015043) #32	Abca12 (MGP_SPRETEiJ_G0015044) #33	Atic (MGP_SPRETEiJ_G0015045) #34	Fn1 (MGP_SPRETEiJ_G0015046) #35	Mreg (MGP_SPRETEiJ_G0015047) #36	Pecr (MGP_SPRETEiJ_G0015048) #37
Ryukyu mouse	MODERN SPECIES		Plekhm3 (MGP_CAROLIEiJ_G0014211) #7	Akr1cl (MGP_CAROLIEiJ_G0014212) #8	Cryge (MGP_CAROLIEiJ_G0014213) #9	Crygd (MGP_CAROLIEiJ_G0014214) #10	Crygc (MGP_CAROLIEiJ_G0014215) #11	Crygb (MGP_CAROLIEiJ_G0014216) #12	Cryga (MGP_CAROLIEiJ_G0014217) #13	MGP_CAROLIEiJ_G0014218 #15	MGP_CAROLIEiJ_G0014219 #15	Idh1 (MGP_CAROLIEiJ_G0014220) #16	Pikfyve (MGP_CAROLIEiJ_G0014221) #17	Pth2r (MGP_CAROLIEiJ_G0014222) #18	Crygf (MGP_CAROLIEiJ_G0014223) #19	Map2 (MGP_CAROLIEiJ_G0014224) #20	Unc80 (MGP_CAROLIEiJ_G0014225) #21	Rpe (MGP_CAROLIEiJ_G0014226) #22	Kansl1l (MGP_CAROLIEiJ_G0014227) #23	Acadl (MGP_CAROLIEiJ_G0014228) #24	Myl1 (MGP_CAROLIEiJ_G0014229) #25	Lancl1 (MGP_CAROLIEiJ_G0014230) #26	Cps1 (MGP_CAROLIEiJ_G0014231) #27	Erbb4 (MGP_CAROLIEiJ_G0014232) #28	Ikzf2 (MGP_CAROLIEiJ_G0014233) #29	Spag16 (MGP_CAROLIEiJ_G0014234) #30	Vwc2l (MGP_CAROLIEiJ_G0014235) #31	Bard1 (MGP_CAROLIEiJ_G0014236) #32	Abca12 (MGP_CAROLIEiJ_G0014237) #33	Atic (MGP_CAROLIEiJ_G0014238) #34	Fn1 (MGP_CAROLIEiJ_G0014239) #35	Mreg (MGP_CAROLIEiJ_G0014240) #36	Pecr (MGP_CAROLIEiJ_G0014241) #37
Shrew mouse	MODERN SPECIES	18	Plekhm3 (MGP_PahariEiJ_G0027449) #7	Akr1cl (MGP_PahariEiJ_G0027450) #8	MGP_PahariEiJ_G0027451 #19	Crygd (MGP_PahariEiJ_G0027452) #10	Crygc (MGP_PahariEiJ_G0027453) #11	Crygb (MGP_PahariEiJ_G0027454) #12	Cryga (MGP_PahariEiJ_G0027455) #13	MGP_PahariEiJ_G0027456 #15	MGP_PahariEiJ_G0027457 #15	Idh1 (MGP_PahariEiJ_G0027458) #16	Pikfyve (MGP_PahariEiJ_G0027459) #17	MGP_PahariEiJ_G0027460 #18	MGP_PahariEiJ_G0027461 #19	Map2 (MGP_PahariEiJ_G0027462) #20	Unc80 (MGP_PahariEiJ_G0027463) #21	Rpe (MGP_PahariEiJ_G0027464) #22	Kansl1l (MGP_PahariEiJ_G0027465) #23	Acadl (MGP_PahariEiJ_G0027466) #24	Myl1 (MGP_PahariEiJ_G0027467) #25	Lancl1 (MGP_PahariEiJ_G0027468) #26	Cps1 (MGP_PahariEiJ_G0027469) #27	Erbb4 (MGP_PahariEiJ_G0027470) #28	Ikzf2 (MGP_PahariEiJ_G0027471) #29	Spag16 (MGP_PahariEiJ_G0027472) #30	Vwc2l (MGP_PahariEiJ_G0027473) #31	Bard1 (MGP_PahariEiJ_G0027474) #32	Abca12 (MGP_PahariEiJ_G0027475) #33	Atic (MGP_PahariEiJ_G0027476) #34	Fn1 (MGP_PahariEiJ_G0027477) #35	Mreg (MGP_PahariEiJ_G0027478) #36	Pecr (MGP_PahariEiJ_G0027479) #37