Percomorphaceae_B	ANCESTRAL SPECIES	16	ENSGT00530000062932	ENSGT00940000154787 #7	ENSGT00940000158763 #8	ENSGT00940000154416.C.c.a.a.a #9	ENSGT00940000153306.A.a #10	ENSGT00940000156654 #11	ENSGT00390000003140.B #14	ENSGT00940000160949 #13	ENSGT01030000234570.d.b.a.b.a.d.b #15	ENSGT00940000158084 #16	ENSGT00530000063861.b.a	ENSGT00940000158325 #18	ENSGT00940000154667.a #19	ENSGT00940000160316 #20	ENSGT00560000078707 #21	ENSGT00940000159244.b #22	ENSGT00940000165854	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147.c.b #25	ENSGT00950000183161.a.b #26	ENSGT00390000008519.kc.b ##27	ENSGT00390000012662	ENSGT00390000008519.lc #27	ENSGT00940000157066.p #28	ENSGT00390000018845.e #29	ENSGT00940000156411 #30	ENSGT00390000012078.b #31	ENSGT00940000156229 #32	ENSGT00950000183175.B.b #33	ENSGT00390000017459 #34
Percomorphaceae_D	ANCESTRAL SPECIES	15	ENSGT00530000062932	ENSGT00940000154787 #7	ENSGT00940000158763 #8	ENSGT00940000154416.C.c.a.a.a #9	ENSGT00940000153306.A.a #10	ENSGT00940000156654 #11	ENSGT00390000003140.B #14	ENSGT00940000160949 #13	ENSGT01030000234570.d.b.a.b.a.d.b #15	ENSGT00940000158084 #16	ENSGT00530000063861.b.a	ENSGT00940000158325 #18	ENSGT00940000154667.a #19	ENSGT00940000160316 #20	ENSGT00560000078707 #21	ENSGT00940000159244.b #22	ENSGT00940000165854	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147.c.b #25	ENSGT00950000183161.a.b #26	ENSGT00390000008519.lc #27	ENSGT00940000157066.p #28	ENSGT00390000018845.e #29	ENSGT00940000156411 #30	ENSGT00390000012078.b #31	ENSGT00940000156229 #32	ENSGT00950000183175.B.b #33	ENSGT00390000017459 #34	ENSGT00940000158581 #36	ENSGT00940000159594 #37
Anabantaria	ANCESTRAL SPECIES	12	ENSGT00530000062932	ENSGT00940000154787 #7	ENSGT00940000158763 #8	ENSGT00940000154416.C.c.a.a.a #9	ENSGT00940000153306.A.a #10	ENSGT00940000156654 #11	ENSGT00390000003140.B #14	ENSGT00940000160949 #13	ENSGT01030000234570.d.b.a.b.a.d.b #15	ENSGT00940000158084 #16	ENSGT00530000063861.b.a	ENSGT00940000158325 #18	ENSGT00940000154667.a #19	ENSGT00940000160316 #20	ENSGT00560000078707 #21	ENSGT00940000159244.b #22	ENSGT00940000165854	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147.c.b #25	ENSGT00950000183161.a.b #26	ENSGT00390000008519.lc #27	ENSGT00940000157066.p #28	ENSGT00390000018845.e #29	ENSGT00940000156411 #30	ENSGT00390000012078.b #31	ENSGT00940000156229 #32	ENSGT00950000183175.B.b #33	ENSGT00390000017459 #34	ENSGT00940000158581 #36	ENSGT00940000159594 #37
Zig-zag eel	MODERN SPECIES	3	ENSMAMG00000013572 #7	ENSMAMG00000028244 #8	ENSMAMG00000013613 #9	znf618 (ENSMAMG00000013660) #10	pappaa (ENSMAMG00000013720) #11	ENSMAMG00000013788 #12	TRIM32 (ENSMAMG00000024727) #13	ENSMAMG00000025927 #14	ENSMAMG00000026585 #15	brinp1 (ENSMAMG00000013874) #16	ENSMAMG00000013906 #17	AK1 (ENSMAMG00000027308) #18	gpsm1b (ENSMAMG00000013932) #19	LHX3 (ENSMAMG00000014008) #20	TMEM250 (ENSMAMG00000014023) #21	NACC2 (ENSMAMG00000014038) #22	NUP214 (ENSMAMG00000014093) #23	fam78ab (ENSMAMG00000025368) #24	PLPP7 (ENSMAMG00000014222) #25	PRRC2B (ENSMAMG00000014236) #26	ENSMAMG00000014254 #27	ENSMAMG00000014273 #28	TMEM38B (ENSMAMG00000014299) #29	ZNF462 (ENSMAMG00000014305) #30	RAD23B (ENSMAMG00000014317) #31	klf4 (ENSMAMG00000014329) #32	ENSMAMG00000014342 #33	ENSMAMG00000014358 #34	ENSMAMG00000028483 #35	ENSMAMG00000014410 #36	SEMA4D (ENSMAMG00000014491) #37
Climbing perch	MODERN SPECIES	3	ENSATEG00000017748 #7	ENSATEG00000017715 #8	ENSATEG00000017666 #9	znf618 (ENSATEG00000017624) #10	pappaa (ENSATEG00000017511) #11	TRIM32 (ENSATEG00000017502) #13	ASTN2 (ENSATEG00000017425) #14	ENSATEG00000029037 #15	brinp1 (ENSATEG00000030167) #16	ENSATEG00000029129	ENSATEG00000017362	ak1 (ENSATEG00000017339) #18	gpsm1b (ENSATEG00000017299) #19	LHX3 (ENSATEG00000017273) #20	TMEM250 (ENSATEG00000017269) #21	NACC2 (ENSATEG00000017233) #22	ENSATEG00000017185	fam78ab (ENSATEG00000017170) #24	ENSATEG00000027027 #25	PRRC2B (ENSATEG00000017136) #26	ENSATEG00000017121 #27	ENSATEG00000017089 #28	TMEM38B (ENSATEG00000017078) #29	ZNF462 (ENSATEG00000017049) #30	RAD23B (ENSATEG00000017032) #31	klf4 (ENSATEG00000017024) #32	ENSATEG00000017006 #33	ENSATEG00000016930 #34	ENSATEG00000016897 #36	SEMA4D (ENSATEG00000016867) #37	CKS2 (ENSATEG00000029965)
Carangaria	ANCESTRAL SPECIES	17	ENSGT00940000154787 #7	ENSGT00940000158763 #8	ENSGT00940000154416.C.c.a.a.a #9	ENSGT00940000153306.A.a #10	ENSGT00940000156654 #11	ENSGT00390000003140.B #14	ENSGT00940000160949 #13	ENSGT01030000234570.d.b.a.b.a.d.b #15	ENSGT00940000158084 #16	ENSGT01010000222537 #17	ENSGT00530000063861.b.a	ENSGT00940000158325 #18	ENSGT00940000154667.a #19	ENSGT00940000160316 #20	ENSGT00560000078707 #21	ENSGT00940000159244.b #22	ENSGT00940000165854	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147.c.b #25	ENSGT00950000183161.a.b #26	ENSGT00390000008519.lc #27	ENSGT00940000157066.p #28	ENSGT00390000018845.e #29	ENSGT00940000156411 #30	ENSGT00390000012078.b #31	ENSGT00940000156229 #32	ENSGT00950000183175.B.b #33	ENSGT00390000017459 #34	ENSGT00940000158581 #36	ENSGT00940000159594 #37
Pleuronectoidei	ANCESTRAL SPECIES	7	ENSGT00530000062932	ENSGT00940000154787 #7	ENSGT00940000158763 #8	ENSGT00940000154416.C.c.a.a.a #9	ENSGT00940000153306.A.a #10	ENSGT00940000156654 #11	ENSGT00390000003140.B #14	ENSGT00940000160949 #13	ENSGT01030000234570.d.b.a.b.a.d.b #15	ENSGT00940000158084 #16	ENSGT01010000222537 #17	ENSGT00940000158325 #18	ENSGT00940000154667.a #19	ENSGT00940000160316 #20	ENSGT00560000078707 #21	ENSGT00940000159244.b #22	ENSGT00940000165854	ENSGT00390000018059.a #24	ENSGT00940000157147.c.b #25	ENSGT00950000183161.a.b #26	ENSGT00390000008519.lc #27	ENSGT00940000157066.p #28	ENSGT00390000018845.e #29	ENSGT00940000156411 #30	ENSGT00390000012078.b #31	ENSGT00940000156229 #32	ENSGT00950000183175.B.b #33	ENSGT00390000017459 #34	ENSGT00940000158581 #36	ENSGT00940000159594 #37	ENSGT00950000182870.a.a.a.b
Turbot	MODERN SPECIES	7	golga2 (ENSSMAG00000004193)	ENSSMAG00000004412 #7	ENSSMAG00000004433 #8	ENSSMAG00000004459 #9	znf618 (ENSSMAG00000004591) #10	pappaa (ENSSMAG00000004665) #11	ASTN2 (ENSSMAG00000004767) #14	TRIM32 (ENSSMAG00000025791) #13	ENSSMAG00000004829 #15	brinp1 (ENSSMAG00000004917) #16	ENSSMAG00000004939 #17	AK1 (ENSSMAG00000004960) #18	gpsm1b (ENSSMAG00000004990) #19	LHX3 (ENSSMAG00000005007) #20	TMEM250 (ENSSMAG00000005026) #21	NACC2 (ENSSMAG00000005034) #22	ENSSMAG00000005051	fam78ab (ENSSMAG00000005235) #24	ENSSMAG00000005238 #25	PRRC2B (ENSSMAG00000005244) #26	ENSSMAG00000005273 #27	ENSSMAG00000022201 #28	TMEM38B (ENSSMAG00000005314) #29	ZNF462 (ENSSMAG00000024653) #30	RAD23B (ENSSMAG00000005335) #31	klf4 (ENSSMAG00000005364) #32	ENSSMAG00000005378 #33	ENSSMAG00000005394 #34	ENSSMAG00000005455 #36	SEMA4D (ENSSMAG00000005595) #37	ENSSMAG00000005630
Tongue sole	MODERN SPECIES	5	BMP10 (ENSCSEG00000016823)	smad4a (ENSCSEG00000016829)	rfx3 (ENSCSEG00000016846)	glis3 (ENSCSEG00000016889)	UNC5C (ENSCSEG00000016909)	bmpr1bb (ENSCSEG00000016981)	ASTN2 (ENSCSEG00000017190) #14	trim32 (ENSCSEG00000017205) #13	ENSCSEG00000017207 #15	brinp1 (ENSCSEG00000017221) #16	ENSCSEG00000017255 #17	ak1 (ENSCSEG00000017279) #18	ENSCSEG00000017290 #19	ENSCSEG00000017292 #19	LHX3 (ENSCSEG00000017295) #20	NACC2 (ENSCSEG00000017316) #22	ENSCSEG00000017366	fam78ab (ENSCSEG00000017421) #24	PLPP7 (ENSCSEG00000017426) #25	PRRC2B (ENSCSEG00000017429) #26	edf1 (ENSCSEG00000017450) #27	PRAG1 (ENSCSEG00000017462) #28	TMEM38B (ENSCSEG00000017467) #29	ZNF462 (ENSCSEG00000017479) #30	RAD23B (ENSCSEG00000017491) #31	znf618 (ENSCSEG00000017506) #10	rgs3a (ENSCSEG00000017543) #9	ENSCSEG00000017576 ##9	hspa5 (ENSCSEG00000017610) #7	rabepk (ENSCSEG00000017627) #8	golga2 (ENSCSEG00000017643)
Carangaria_A	ANCESTRAL SPECIES	18	ENSGT00940000154787 #7	ENSGT00940000158763 #8	ENSGT00940000154416.C.c.a.a.a #9	ENSGT00940000153306.A.a #10	ENSGT00940000156654 #11	ENSGT00940000160949 #13	ENSGT00390000003140.B #14	ENSGT01030000234570.d.b.a.b.a.d.b #15	ENSGT00940000158084 #16	ENSGT01010000222537 #17	ENSGT00530000063861.b.a	ENSGT00940000158325 #18	ENSGT00940000154667.a #19	ENSGT00940000160316 #20	ENSGT00560000078707 #21	ENSGT00940000159244.b #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147.c.b #25	ENSGT00950000183161.a.b #26	ENSGT00390000008519.lc #27	ENSGT00940000157066.p #28	ENSGT00390000018845.e #29	ENSGT00940000156411 #30	ENSGT00390000012078.b #31	ENSGT00940000156229 #32	ENSGT00950000183175.B.b #33	ENSGT00390000017459 #34	ENSGT00940000158581 #36	ENSGT00940000159594 #37	ENSGT00950000182870.a.a.a.b
Barramundi perch	MODERN SPECIES	101							trim32 (ENSLCAG00010006261) #13	ASTN2 (ENSLCAG00010006120) #14	ENSLCAG00010006082 #15	brinp1 (ENSLCAG00010006075) #16	ENSLCAG00010006069 #17	ak1 (ENSLCAG00010006057) #18	gpsm1b (ENSLCAG00010006039) #19	LHX3 (ENSLCAG00010006027) #20	TMEM250 (ENSLCAG00010006022) #21	NACC2 (ENSLCAG00010006019) #22	ENSLCAG00010006014 #23	fam78ab (ENSLCAG00010006013) #24	PLPP7 (ENSLCAG00010006009) #25	PRRC2B (ENSLCAG00010006000) #26	edf1 (ENSLCAG00010005990) ##27	TMEM38B (ENSLCAG00010005966) #29	ZNF462 (ENSLCAG00010005962) #30	RAD23B (ENSLCAG00010005956) #31	ENSLCAG00010005953 #33	ENSLCAG00010005545 #32	ENSLCAG00010005459 #34	ENSLCAG00010005452	add1 (ENSLCAG00010005408) #36	ENSLCAG00010005357	ENSLCAG00010005334
Seriola	ANCESTRAL SPECIES	19	ENSGT00530000062932	ENSGT00940000154787 #7	ENSGT00940000158763 #8	ENSGT00940000154416.C.c.a.a.a #9	ENSGT00940000153306.A.a #10	ENSGT00940000156654 #11	ENSGT00390000003140.B #14	ENSGT00940000160949 #13	ENSGT01030000234570.d.b.a.b.a.d.b #15	ENSGT00940000158084 #16	ENSGT00530000063861.b.a	ENSGT00940000158325 #18	ENSGT00940000154667.a #19	ENSGT00940000160316 #20	ENSGT00560000078707 #21	ENSGT00940000159244.b #22	ENSGT00940000165854	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147.c.b #25	ENSGT00950000183161.a.b #26	ENSGT00390000008519.lc #27	ENSGT00940000157066.p #28	ENSGT00390000018845.e #29	ENSGT00940000156411 #30	ENSGT00390000012078.b #31	ENSGT00940000156229 #32	ENSGT00950000183175.B.b #33	ENSGT00390000017459 #34	ENSGT00940000158581 #36	ENSGT00940000159594 #37
Greater amberjack	MODERN SPECIES	238						ASTN2 (ENSSDUG00000011982) #14	trim32 (ENSSDUG00000012081) #13	ENSSDUG00000012093 #15	brinp1 (ENSSDUG00000012104) #16	ENSSDUG00000012141	ENSSDUG00000012166	ak1 (ENSSDUG00000012178) #18	gpsm1b (ENSSDUG00000012192) #19	LHX3 (ENSSDUG00000012210) #20	TMEM250 (ENSSDUG00000012225) #21	NACC2 (ENSSDUG00000012236) #22	ENSSDUG00000012282	fam78ab (ENSSDUG00000012346) #24	PLPP7 (ENSSDUG00000012359) #25	PRRC2B (ENSSDUG00000012377) #26	edf1 (ENSSDUG00000012451) #27	PRAG1 (ENSSDUG00000012477) #28
Yellowtail amberjack	MODERN SPECIES	2993	golga2 (ENSSLDG00000008687)	hspa5 (ENSSLDG00000008640) #7	rabepk (ENSSLDG00000008624) #8	ENSSLDG00000008573 #9	znf618 (ENSSLDG00000008525) #10	pappaa (ENSSLDG00000008407) #11	trim32 (ENSSLDG00000008373) #13	ASTN2 (ENSSLDG00000008315) #14	ENSSLDG00000008294 #15	brinp1 (ENSSLDG00000008271) #16	ENSSLDG00000008248 #17	ak1 (ENSSLDG00000008196) #18	gpsm1b (ENSSLDG00000008113) #19	LHX3 (ENSSLDG00000008060) #20	TMEM250 (ENSSLDG00000008041) #21	NACC2 (ENSSLDG00000007987) #22	NUP214 (ENSSLDG00000007931) #23	fam78ab (ENSSLDG00000007907) #24	PLPP7 (ENSSLDG00000007889) #25	PRRC2B (ENSSLDG00000007798) #26	edf1 (ENSSLDG00000007757) #27	PRAG1 (ENSSLDG00000007744) #28	TMEM38B (ENSSLDG00000007728) #29	ZNF462 (ENSSLDG00000007696) #30	RAD23B (ENSSLDG00000007645) #31	klf4 (ENSSLDG00000007621) #32	SNCA (ENSSLDG00000007605) #33	nop14 (ENSSLDG00000007570) #34	add1 (ENSSLDG00000007505) #36	SEMA4D (ENSSLDG00000007453) #37	SHC3 (ENSSLDG00000007387)
Eupercaria	ANCESTRAL SPECIES	13	ENSGT00530000062932	ENSGT00940000154787 #7	ENSGT00940000158763 #8	ENSGT00940000154416.C.c.a.a.a #9	ENSGT00940000153306.A.a #10	ENSGT00940000156654 #11	ENSGT00390000003140.B #14	ENSGT00940000160949 #13	ENSGT01030000234570.d.b.a.b.a.d.b #15	ENSGT00940000158084 #16	ENSGT00530000063861.b.a	ENSGT00940000158325 #18	ENSGT00940000154667.a #19	ENSGT00940000160316 #20	ENSGT00560000078707 #21	ENSGT00940000159244.b #22	ENSGT00940000165854	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147.c.b #25	ENSGT00950000183161.a.b #26	ENSGT00390000008519.kc.b ##27	ENSGT00390000012662	ENSGT00390000008519.lc #27	ENSGT00940000157066.p #28	ENSGT00390000018845.e #29	ENSGT00940000156411 #30	ENSGT00390000012078.b #31	ENSGT00940000156229 #32	ENSGT00950000183175.B.b #33	ENSGT00390000017459 #34
Tetraodontidae	ANCESTRAL SPECIES	19	ENSGT00940000159475.c	ENSGT00940000154787 #7	ENSGT00940000158763 #8	ENSGT00940000154416.C.c.a.a.a #9	ENSGT00940000153306.A.a #10	ENSGT00940000156654 #11	ENSGT00390000003140.B #14	ENSGT00940000160949 #13	ENSGT01030000234570.d.b.a.b.a.d.b #15	ENSGT00940000158084 #16	ENSGT01010000222537 #17	ENSGT00940000158325 #18	ENSGT00940000154667.a #19	ENSGT00940000160316 #20	ENSGT00560000078707 #21	ENSGT00940000159244.b #22	ENSGT00390000018059.a #24	ENSGT00940000157147.c.b #25	ENSGT00950000183161.a.b #26	ENSGT00390000008519.lc #27	ENSGT00940000157066.p #28	ENSGT00940000156026.e.d	ENSGT00390000018845.e #29	ENSGT00940000156411 #30	ENSGT00390000012078.b #31	ENSGT00940000156229 #32	ENSGT00950000183175.B.b #33	ENSGT00390000017459 #34	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b
Fugu	MODERN SPECIES	18	rabepk (ENSTRUG00000019746) #8	ENSTRUG00000004100 #9	znf618 (ENSTRUG00000004978) #10	pappaa (ENSTRUG00000005279) #11	ASTN2 (ENSTRUG00000005783) #14	trim32 (ENSTRUG00000019757) #13	ENSTRUG00000027442	MYL4 (ENSTRUG00000006569) #15	ENSTRUG00000031274	brinp1 (ENSTRUG00000006631) #16	ENSTRUG00000023800 #17	ak1 (ENSTRUG00000006830) #18	gpsm1b (ENSTRUG00000006995) #19	LHX3 (ENSTRUG00000007321) #20	TMEM250 (ENSTRUG00000021862) #21	NACC2 (ENSTRUG00000022631) #22	PRRC2B (ENSTRUG00000007589) #26	fam78ab (ENSTRUG00000032625) #24	PLPP7 (ENSTRUG00000008404) #25	ENSTRUG00000027641	edf1 (ENSTRUG00000008728) #27	PRAG1 (ENSTRUG00000022632) #28	ENSTRUG00000008858	TMEM38B (ENSTRUG00000008873) #29	ENSTRUG00000026785	ZNF462 (ENSTRUG00000009094) #30	RAD23B (ENSTRUG00000009265) #31	klf4 (ENSTRUG00000009613) #32	SNCA (ENSTRUG00000009668) #33	nop14 (ENSTRUG00000009735) #34	DYM (ENSTRUG00000009986)
Tetraodon	MODERN SPECIES	26	ENSTNIG00000006246	MPV17L (ENSTNIG00000006245)	bmerb1 (ENSTNIG00000006244)	ENSTNIG00000006243	panx1b (ENSTNIG00000006242)	ENSTNIG00000006231	TRAK1 (ENSTNIG00000006230)	si:ch211-225p5.8 (ENSTNIG00000006224)	ssr1 (ENSTNIG00000001825)	ezh2 (ENSTNIG00000001819)	ENSTNIG00000006211	ENSTNIG00000006210	ENSTNIG00000006209	galcb (ENSTNIG00000006200)	ENSTNIG00000006199	ENSTNIG00000006198 #22	ENSTNIG00000006197 #23	TAAR1 (ENSTNIG00000001226)	TAAR1 (ENSTNIG00000005193)	TAAR1 (ENSTNIG00000000218)	TAAR1 (ENSTNIG00000001471)	ENSTNIG00000006156	MMP17 (ENSTNIG00000006155)	ULK1 (ENSTNIG00000006154)	crkl (ENSTNIG00000006153)	MMP17 (ENSTNIG00000006152)	ENSTNIG00000000082	pgam2 (ENSTNIG00000006151)	nefma (ENSTNIG00000006150)	ENSTNIG00000006149	FLNC (ENSTNIG00000006148)
Eupecaria_A	ANCESTRAL SPECIES	14	ENSGT00530000062932	ENSGT00940000154787 #7	ENSGT00940000158763 #8	ENSGT00940000154416.C.c.a.a.a #9	ENSGT00940000153306.A.a #10	ENSGT00940000156654 #11	ENSGT00940000160949 #13	ENSGT00390000003140.B #14	ENSGT01030000234570.d.b.a.b.a.d.b #15	ENSGT00940000158084 #16	ENSGT00530000063861.b.a	ENSGT00940000158325 #18	ENSGT00940000154667.a #19	ENSGT00940000160316 #20	ENSGT00560000078707 #21	ENSGT00940000159244.b #22	ENSGT00940000165854	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147.c.b #25	ENSGT00950000183161.a.b #26	ENSGT00390000008519.kc.b ##27	ENSGT00390000012662	ENSGT00390000008519.lc #27	ENSGT00940000157066.p #28	ENSGT00390000018845.e #29	ENSGT00940000156411 #30	ENSGT00390000012078.b #31	ENSGT00940000156229 #32	ENSGT00950000183175.B.b #33	ENSGT00390000017459 #34
Ballan wrasse	MODERN SPECIES	114			rpz2 (ENSLBEG00000019953)	rgs3a (ENSLBEG00000019898) #9	znf618 (ENSLBEG00000019809) #10	pappaa (ENSLBEG00000019723) #11	trim32 (ENSLBEG00000019707) #13	ASTN2 (ENSLBEG00000019641) #14	MYL4 (ENSLBEG00000019621) #15	brinp1 (ENSLBEG00000019596) #16	ENSLBEG00000019568 #17	ak1 (ENSLBEG00000019537) #18	gpsm1b (ENSLBEG00000019461) #19	LHX3 (ENSLBEG00000019419) #20	TMEM250 (ENSLBEG00000019407) #21	NACC2 (ENSLBEG00000019373) #22	ENSLBEG00000019324	fam78ab (ENSLBEG00000019295) #24	PLPP7 (ENSLBEG00000019271) #25	ENSLBEG00000019255 #26	PRRC2B (ENSLBEG00000019218) #26	edf1 (ENSLBEG00000019181) ##27	PRAG1 (ENSLBEG00000019150) #28
Eupecaria_B	ANCESTRAL SPECIES	14	ENSGT00530000062932	ENSGT00940000154787 #7	ENSGT00940000158763 #8	ENSGT00940000154416.C.c.a.a.a #9	ENSGT00940000153306.A.a #10	ENSGT00940000156654 #11	ENSGT00390000003140.B #14	ENSGT00940000160949 #13	ENSGT01030000234570.d.b.a.b.a.d.b #15	ENSGT00940000158084 #16	ENSGT00530000063861.b.a	ENSGT00940000158325 #18	ENSGT00940000154667.a #19	ENSGT00940000160316 #20	ENSGT00560000078707 #21	ENSGT00940000159244.b #22	ENSGT00940000165854	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147.c.b #25	ENSGT00950000183161.a.b #26	ENSGT00390000012662	ENSGT00390000008519.lc #27	ENSGT00940000157066.p #28	ENSGT00390000018845.e #29	ENSGT00940000156411 #30	ENSGT00390000012078.b #31	ENSGT00940000156229 #32	ENSGT00950000183175.B.b #33	ENSGT00390000017459 #34	ENSGT00940000158581 #36
Eupecaria_C	ANCESTRAL SPECIES	9	ENSGT00530000062932	ENSGT00940000154787 #7	ENSGT00940000158763 #8	ENSGT00940000154416.C.c.a.a.a #9	ENSGT00940000153306.A.a #10	ENSGT00940000156654 #11	ENSGT00390000003140.B #14	ENSGT00940000160949 #13	ENSGT01030000234570.d.b.a.b.a.d.b #15	ENSGT00940000158084 #16	ENSGT00530000063861.b.a	ENSGT00940000158325 #18	ENSGT00940000154667.a #19	ENSGT00940000160316 #20	ENSGT00560000078707 #21	ENSGT00940000159244.b #22	ENSGT00940000165854	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147.c.b #25	ENSGT00950000183161.a.b #26	ENSGT00390000008519.lc #27	ENSGT00940000157066.p #28	ENSGT00390000018845.e #29	ENSGT00940000156411 #30	ENSGT00390000012078.b #31	ENSGT00940000156229 #32	ENSGT00950000183175.B.b #33	ENSGT00390000017459 #34	ENSGT00940000158581 #36	ENSGT00940000159594 #37
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	6	ENSGT00530000062932	ENSGT00940000154787 #7	ENSGT00940000158763 #8	ENSGT00940000154416.C.c.a.a.a #9	ENSGT00940000153306.A.a #10	ENSGT00940000156654 #11	ENSGT00390000003140.B #14	ENSGT00940000160949 #13	ENSGT01030000234570.d.b.a.b.a.d.b #15	ENSGT00940000158084 #16	ENSGT00530000063861.b.a	ENSGT00940000158325 #18	ENSGT00940000154667.a #19	ENSGT00940000160316 #20	ENSGT00560000078707 #21	ENSGT00940000159244.b #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00950000183161.a.b #26	ENSGT00390000008519.lc #27	ENSGT00940000157066.p #28	ENSGT00390000018845.e #29	ENSGT00940000156411 #30	ENSGT00390000012078.b #31	ENSGT00940000156229 #32	ENSGT00950000183175.B.b #33	ENSGT00390000017459 #34	ENSGT00940000158581 #36	ENSGT00940000159594 #37	ENSGT00950000182870.a.a.a.b	ENSGT01050000244887.A.b.b
European seabass	MODERN SPECIES	9	golga2 (ENSDLAG00005001135)	ENSDLAG00005001005 #7	ENSDLAG00005000981 #8	rgs3a (ENSDLAG00005000959) #9	znf618 (ENSDLAG00005000948) #10	pappaa (ENSDLAG00005000923) #11	TRIM32 (ENSDLAG00005030662) #13	ASTN2 (ENSDLAG00005000790) #14	ENSDLAG00005028553 #15	brinp1 (ENSDLAG00005034270) #16	ENSDLAG00005000768	ak1 (ENSDLAG00005000761) #18	gpsm1b (ENSDLAG00005000644) #19	LHX3 (ENSDLAG00005000609) #20	TMEM250 (ENSDLAG00005000602) #21	NACC2 (ENSDLAG00005000599) #22	fam78ab (ENSDLAG00005027480) #24	ENSDLAG00005000552 #23	ENSDLAG00005000511 #26	ENSDLAG00005000498 #28	TMEM38B (ENSDLAG00005000487) #29	ZNF462 (ENSDLAG00005028981) #30	RAD23B (ENSDLAG00005020961) #31	klf4 (ENSDLAG00005020958) #32	ENSDLAG00005033769 #33	ENSDLAG00005019833 #34	ENSDLAG00005018544 #36	SEMA4D (ENSDLAG00005018400) #37	ENSDLAG00005018331	S1PR3 (ENSDLAG00005018326)	ZBTB7C (ENSDLAG00005018320)
Large yellow croaker	MODERN SPECIES	4	golga2 (ENSLCRG00005016198)	hspa5 (ENSLCRG00005016224) #7	rabepk (ENSLCRG00005016505) #8	ENSLCRG00005000249 #9	znf618 (ENSLCRG00005000308) #10	pappaa (ENSLCRG00005000369) #11	ASTN2 (ENSLCRG00005000893) #14	trim32 (ENSLCRG00005001857) #13	MYL4 (ENSLCRG00005001861) #15	brinp1 (ENSLCRG00005001868) #16	ENSLCRG00005001877 #17	ak1 (ENSLCRG00005001891) #18	gpsm1b (ENSLCRG00005001928) #19	LHX3 (ENSLCRG00005002254) #20	TMEM250 (ENSLCRG00005002261) #21	NACC2 (ENSLCRG00005002265) #22	NUP214 (ENSLCRG00005002285) #23	fam78ab (ENSLCRG00005002317) #24	PRRC2B (ENSLCRG00005002321) #26	edf1 (ENSLCRG00005002335) #27	PRAG1 (ENSLCRG00005002337) #28	TMEM38B (ENSLCRG00005002338) #29	ZNF462 (ENSLCRG00005002344) #30	RAD23B (ENSLCRG00005002356) #31	klf4 (ENSLCRG00005002372) #32	ENSLCRG00005002382 #33	nop14 (ENSLCRG00005002506) #34	add1 (ENSLCRG00005003781) #36	SEMA4D (ENSLCRG00005003817) #37	SHC3 (ENSLCRG00005003831)	S1PR3 (ENSLCRG00005003832)
Gilthead seabream	MODERN SPECIES	3	golga2 (ENSSAUG00010008870)	hspa5 (ENSSAUG00010008911) #7	rabepk (ENSSAUG00010008931) #8	RGS3 (ENSSAUG00010008934) #9	znf618 (ENSSAUG00010008945) #10	pappaa (ENSSAUG00010008975) #11	ASTN2 (ENSSAUG00010010022) #14	trim32 (ENSSAUG00010010155) #13	MYL4 (ENSSAUG00010010156) #15	brinp1 (ENSSAUG00010010157) #16	ENSSAUG00010010158	ak1 (ENSSAUG00010010160) #18	gpsm1b (ENSSAUG00010010163) #19	LHX3 (ENSSAUG00010010167) #20	TMEM250 (ENSSAUG00010010168) #21	NACC2 (ENSSAUG00010010169) #22	ENSSAUG00010010187	fam78ab (ENSSAUG00010010747) #24	PLPP7 (ENSSAUG00010010750) #25	PRRC2B (ENSSAUG00010010757) #26	edf1 (ENSSAUG00010010776) #27	PRAG1 (ENSSAUG00010010780) #28	TMEM38B (ENSSAUG00010010785) #29	ZNF462 (ENSSAUG00010010792) #30	RAD23B (ENSSAUG00010010799) #31	klf4 (ENSSAUG00010010801) #32	ENSSAUG00010010803 #33	nop14 (ENSSAUG00010010830) #34	add1 (ENSSAUG00010012801) #36	SEMA4D (ENSSAUG00010012867) #37	SHC3 (ENSSAUG00010013555)
Perciformes	ANCESTRAL SPECIES	16	ENSGT00530000062932	ENSGT00940000154787 #7	ENSGT00940000158763 #8	ENSGT00940000154416.C.c.a.a.a #9	ENSGT00940000153306.A.a #10	ENSGT00940000156654 #11	ENSGT00940000160949 #13	ENSGT00390000003140.B #14	ENSGT01030000234570.d.b.a.b.a.d.b #15	ENSGT00940000158084 #16	ENSGT00530000063861.b.a	ENSGT00940000158325 #18	ENSGT00940000154667.a #19	ENSGT00940000160316 #20	ENSGT00560000078707 #21	ENSGT00940000159244.b #22	ENSGT00940000165854	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147.c.b #25	ENSGT00950000183161.a.b #26	ENSGT00390000012662	ENSGT00390000008519.lc #27	ENSGT00940000157066.p #28	ENSGT00390000018845.e #29	ENSGT00940000156411 #30	ENSGT00390000012078.b #31	ENSGT00940000156229 #32	ENSGT00950000183175.B.b #33	ENSGT00390000017459 #34	ENSGT00940000158581 #36
Cottioidei	ANCESTRAL SPECIES	18	ENSGT00530000062932	ENSGT00940000154787 #7	ENSGT00940000158763 #8	ENSGT00940000154416.C.c.a.a.a #9	ENSGT00940000153306.A.a #10	ENSGT00940000156654 #11	ENSGT00390000003140.B #14	ENSGT00940000160949 #13	ENSGT01030000234570.d.b.a.b.a.d.b #15	ENSGT00940000158084 #16	ENSGT00530000063861.b.a	ENSGT00940000158325 #18	ENSGT00940000154667.a #19	ENSGT00940000160316 #20	ENSGT00560000078707 #21	ENSGT00940000159244.b #22	ENSGT00940000165854	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147.c.b #25	ENSGT00950000183161.a.b #26	ENSGT00390000012662	ENSGT00390000008519.lc #27	ENSGT00940000157066.p #28	ENSGT00390000018845.e #29	ENSGT00940000156411 #30	ENSGT00390000012078.b #31	ENSGT00940000156229 #32	ENSGT00950000183175.B.b #33	ENSGT00390000017459 #34	ENSGT00940000158581 #36
Lumpfish	MODERN SPECIES	3	rabepk (ENSCLMG00005011413) #8	ENSCLMG00005011410 #9	ENSCLMG00005011408 #9	znf618 (ENSCLMG00005011404) #10	pappaa (ENSCLMG00005011317) #11	trim32 (ENSCLMG00005011310) #13	ENSCLMG00005011307	ASTN2 (ENSCLMG00005011219) #14	MYL4 (ENSCLMG00005011210) #15	brinp1 (ENSCLMG00005011209) #16	ENSCLMG00005011206	ak1 (ENSCLMG00005011203) #18	gpsm1b (ENSCLMG00005010916) #19	LHX3 (ENSCLMG00005010909) #20	TMEM250 (ENSCLMG00005010907) #21	NACC2 (ENSCLMG00005010906) #22	NUP214 (ENSCLMG00005010905) #23	fam78ab (ENSCLMG00005010902) #24	PLPP7 (ENSCLMG00005010901) #25	PRRC2B (ENSCLMG00005010898) #26	edf1 (ENSCLMG00005010897) #27	PRAG1 (ENSCLMG00005010895) #28	TMEM38B (ENSCLMG00005010892) #29	ZNF462 (ENSCLMG00005010889) #30	RAD23B (ENSCLMG00005010887) #31	klf4 (ENSCLMG00005010885) #32	ENSCLMG00005010884 #33	nop14 (ENSCLMG00005010052) #34	add1 (ENSCLMG00005009979) #36	SEMA4D (ENSCLMG00005009537) #37	SHC3 (ENSCLMG00005009526)
Stickleback	MODERN SPECIES	13	golga2 (ENSGACG00000016644)	hspa5 (ENSGACG00000016633) #7	rabepk (ENSGACG00000016628) #8	RGS3 (ENSGACG00000016619) #9	znf618 (ENSGACG00000016617) #10	pappaa (ENSGACG00000016615) #11	trim32 (ENSGACG00000016614) #13	ASTN2 (ENSGACG00000016611) #14	MYL4 (ENSGACG00000016608) #15	brinp1 (ENSGACG00000016603) #16	ENSGACG00000016601	ak1 (ENSGACG00000016598) #18	gpsm1b (ENSGACG00000016596) #19	LHX3 (ENSGACG00000016592) #20	TMEM250 (ENSGACG00000016591) #21	NACC2 (ENSGACG00000016588) #22	ENSGACG00000016574	fam78ab (ENSGACG00000016573) #24	PLPP7 (ENSGACG00000016572) #25	PRRC2B (ENSGACG00000016565) #26	ENSGACG00000016564	edf1 (ENSGACG00000016554) #27	ENSGACG00000016552 #28	TMEM38B (ENSGACG00000016548) #29	ZNF462 (ENSGACG00000016543) #30	RAD23B (ENSGACG00000016541) #31	klf4 (ENSGACG00000016540) #32	ENSGACG00000016537 #33	nop14 (ENSGACG00000016531) #34	add1 (ENSGACG00000016528) #36	SEMA4D (ENSGACG00000016523) #37
Perciformes_a	ANCESTRAL SPECIES	12	ENSGT00530000062932	ENSGT00940000154787 #7	ENSGT00940000158763 #8	ENSGT00940000154416.C.c.a.a.a #9	ENSGT00940000153306.A.a #10	ENSGT00940000156654 #11	ENSGT00940000160949 #13	ENSGT00390000003140.B #14	ENSGT01030000234570.d.b.a.b.a.d.b #15	ENSGT00940000158084 #16	ENSGT00530000063861.b.a	ENSGT00940000158325 #18	ENSGT00940000154667.a #19	ENSGT00940000160316 #20	ENSGT00560000078707 #21	ENSGT00940000159244.b #22	ENSGT00940000165854	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147.c.b #25	ENSGT00950000183161.a.b #26	ENSGT00390000008519.lc #27	ENSGT00940000157066.p #28	ENSGT00390000018845.e #29	ENSGT00940000156411 #30	ENSGT00390000012078.b #31	ENSGT00940000156229 #32	ENSGT00950000183175.B.b #33	ENSGT00390000017459 #34	ENSGT00940000158581 #36	ENSGT00940000159594 #37
Pike perch	MODERN SPECIES	33													gpsm1b (ENSSLUG00000005623) #19	LHX3 (ENSSLUG00000005633) #20	TMEM250 (ENSSLUG00000005655) #21	NACC2 (ENSSLUG00000005658) #22	NUP214 (ENSSLUG00000005719) #23	fam78ab (ENSSLUG00000005874) #24	PLPP7 (ENSSLUG00000005877) #25	edf1 (ENSSLUG00000005896) #27	TMEM38B (ENSSLUG00000005908) #29	ZNF462 (ENSSLUG00000005918) #30	rad23b (ENSSLUG00000005927) #31	klf4 (ENSSLUG00000005939) #32	SNCA (ENSSLUG00000005945) #33	nop14 (ENSSLUG00000005991) #34	add1 (ENSSLUG00000006483) #36	SEMA4D (ENSSLUG00000006703) #37	SHC3 (ENSSLUG00000007647)	S1PR3 (ENSSLUG00000007993)	ZBTB7C (ENSSLUG00000008003)
Channel bull blenny	MODERN SPECIES	3	hspa5 (ENSCGOG00000021559) #7	rabepk (ENSCGOG00000021471) #8	RGS3 (ENSCGOG00000021463) #9	znf618 (ENSCGOG00000021459) #10	pappaa (ENSCGOG00000021444) #11	trim32 (ENSCGOG00000021442) #13	ENSCGOG00000021441	ASTN2 (ENSCGOG00000021426) #14	MYL4 (ENSCGOG00000021424) #15	brinp1 (ENSCGOG00000021409) #16	ENSCGOG00000021405	ak1 (ENSCGOG00000021381) #18	gpsm1b (ENSCGOG00000020895) #19	LHX3 (ENSCGOG00000020868) #20	TMEM250 (ENSCGOG00000020867) #21	NACC2 (ENSCGOG00000020866) #22	ENSCGOG00000020852	fam78ab (ENSCGOG00000020848) #24	PLPP7 (ENSCGOG00000020847) #25	PRRC2B (ENSCGOG00000020778) #26	edf1 (ENSCGOG00000020772) #27	PRAG1 (ENSCGOG00000020770) #28	TMEM38B (ENSCGOG00000020768) #29	ZNF462 (ENSCGOG00000020767) #30	RAD23B (ENSCGOG00000020766) #31	klf4 (ENSCGOG00000020765) #32	ENSCGOG00000020764 #33	nop14 (ENSCGOG00000020484) #34	add1 (ENSCGOG00000019990) #36	SEMA4D (ENSCGOG00000019944) #37	SHC3 (ENSCGOG00000019876)
Ovalentaria	ANCESTRAL SPECIES	16	ENSGT00530000062932	ENSGT00940000154787 #7	ENSGT00940000158763 #8	ENSGT00940000154416.C.c.a.a.a #9	ENSGT00940000153306.A.a #10	ENSGT00940000156654 #11	ENSGT00390000003140.B #14	ENSGT00940000160949 #13	ENSGT01030000234570.d.b.a.b.a.d.b #15	ENSGT00940000158084 #16	ENSGT00530000063861.b.a	ENSGT00940000158325 #18	ENSGT00940000154667.a #19	ENSGT00940000160316 #20	ENSGT00560000078707 #21	ENSGT00940000159244.b #22	ENSGT00940000165854	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147.c.b #25	ENSGT00950000183161.a.b #26	ENSGT00390000012662	ENSGT00390000008519.lc #27	ENSGT00940000157066.p #28	ENSGT00390000018845.e #29	ENSGT00940000156411 #30	ENSGT00390000012078.b #31	ENSGT00940000156229 #32	ENSGT00950000183175.B.b #33	ENSGT00390000017459 #34	ENSGT00940000158581 #36
Atherinomorphae	ANCESTRAL SPECIES	17	ENSGT00940000154787 #7	ENSGT00940000158763 #8	ENSGT00940000154416.C.c.a.a.a #9	ENSGT00940000153306.A.a #10	ENSGT00940000156654 #11	ENSGT00390000003140.B #14	ENSGT00940000160949 #13	ENSGT01030000234570.d.b.a.b.a.d.b #15	ENSGT00940000158084 #16	ENSGT01010000222537 #17	ENSGT00530000063861.b.a	ENSGT00940000158325 #18	ENSGT00940000154667.a #19	ENSGT00940000160316 #20	ENSGT00560000078707 #21	ENSGT00940000159244.b #22	ENSGT00940000165854	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147.c.b #25	ENSGT00950000183161.a.b #26	ENSGT00390000012662	ENSGT00390000008519.lc #27	ENSGT00940000157066.p #28	ENSGT00390000018845.e #29	ENSGT00940000156411 #30	ENSGT00390000012078.b #31	ENSGT00940000156229 #32	ENSGT00950000183175.B.b #33	ENSGT00390000017459 #34	ENSGT00940000158581 #36
Mangrove rivulus	MODERN SPECIES	9	golga2 (ENSKMAG00000016273)	hspa5 (ENSKMAG00000016210) #7	rabepk (ENSKMAG00000016174) #8	rgs3a (ENSKMAG00000016131) #9	znf618 (ENSKMAG00000016099) #10	pappaa (ENSKMAG00000016013) #11	trim32 (ENSKMAG00000015984) #13	ASTN2 (ENSKMAG00000015878) #14	ENSKMAG00000015836 #15	brinp1 (ENSKMAG00000015805) #16	ENSKMAG00000015764 #17	ak1 (ENSKMAG00000015726) #18	gpsm1b (ENSKMAG00000015670) #19	LHX3 (ENSKMAG00000015643) #20	TMEM250 (ENSKMAG00000015629) #21	NACC2 (ENSKMAG00000015604) #22	NUP214 (ENSKMAG00000015549) #23	fam78ab (ENSKMAG00000015518) #24	PLPP7 (ENSKMAG00000015492) #25	PRRC2B (ENSKMAG00000015461) #26	edf1 (ENSKMAG00000015431) #27	PRAG1 (ENSKMAG00000015405) #28	TMEM38B (ENSKMAG00000015364) #29	ZNF462 (ENSKMAG00000015331) #30	ENSKMAG00000015296	RAD23B (ENSKMAG00000015235) #31	klf4 (ENSKMAG00000015214) #32	ENSKMAG00000015199 #33	nop14 (ENSKMAG00000015165) #34	add1 (ENSKMAG00000015008) #36	SEMA4D (ENSKMAG00000014901) #37
Turquoise killifish	MODERN SPECIES	1611	pappaa (ENSNFUG00015021209) #11	ASTN2 (ENSNFUG00015021831) #14	ENSNFUG00015021939	trim32 (ENSNFUG00015021942) #13	ENSNFUG00015021944	MYL4 (ENSNFUG00015021947) #15	ENSNFUG00015021949	ENSNFUG00015021950	DBC1 (ENSNFUG00015021952) #16	ENSNFUG00015021957	Nfu_g_1_006350 (ENSNFUG00015000243)	ak1 (ENSNFUG00015000272) #18	GPSM1B (ENSNFUG00015000386) #19	CABZ01029738.1 (ENSNFUG00015000511) #20	C9ORF69 (ENSNFUG00015000522) #21	NACC2 (ENSNFUG00015000526) #22	NUP214 (ENSNFUG00015000589)	fam78ab (ENSNFUG00015000708) #24	PPAPDC3 (ENSNFUG00015000715) #25	PRRC2B (ENSNFUG00015000736) #26	EDF1 (ENSNFUG00015000783) #27	CABZ01072929.1 (ENSNFUG00015000787) #28	ENSNFUG00015000789	CABZ01079427.1 (ENSNFUG00015000795) #29	ZNF462 (ENSNFUG00015000800) #30	KLF4 (ENSNFUG00015000807) #32	RAD23B (ENSNFUG00015000812) #31	ENSNFUG00015000821	nop14 (ENSNFUG00015000830) #34	SNCA (ENSNFUG00015000931) #33	add1 (ENSNFUG00015000940) #36
Cyprinodontoidei	ANCESTRAL SPECIES	16	ENSGT00940000154787 #7	ENSGT00940000158763 #8	ENSGT00940000154416.C.c.a.a.a #9	ENSGT00940000153306.A.a #10	ENSGT00940000156654 #11	ENSGT00390000003140.B #14	ENSGT00940000160949 #13	ENSGT01030000234570.d.b.a.b.a.d.b #15	ENSGT00940000158084 #16	ENSGT01010000222537 #17	ENSGT00530000063861.b.a	ENSGT00940000158325 #18	ENSGT00940000154667.a #19	ENSGT00940000160316 #20	ENSGT00560000078707 #21	ENSGT00940000159244.b #22	ENSGT00940000165854	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147.c.b #25	ENSGT00950000183161.a.b #26	ENSGT00390000012662	ENSGT00390000008519.lc #27	ENSGT00940000157066.p #28	ENSGT00390000018845.e #29	ENSGT00940000156411 #30	ENSGT00390000012078.b #31	ENSGT00940000156229 #32	ENSGT00950000183175.B.b #33	ENSGT00390000017459 #34	ENSGT00940000158581 #36
Poeciliinae	ANCESTRAL SPECIES	12	ENSGT00530000062932	ENSGT00940000158763 #8	ENSGT00940000154787 #7	ENSGT00940000154416.C.c.a.a.a #9	ENSGT00940000153306.A.a #10	ENSGT00940000156654 #11	ENSGT00390000003140.B #14	ENSGT00940000160949 #13	ENSGT01030000234570.d.b.a.b.a.d.b #15	ENSGT00940000158084 #16	ENSGT00530000063861.b.a	ENSGT00940000158325 #18	ENSGT00940000154667.a #19	ENSGT00940000160316 #20	ENSGT00560000078707 #21	ENSGT00940000159244.b #22	ENSGT00940000165854	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147.c.b #25	ENSGT00950000183161.a.b #26	ENSGT00390000012662	ENSGT00390000008519.lc #27	ENSGT00940000157066.p #28	ENSGT00390000018845.e #29	ENSGT00940000156411 #30	ENSGT00390000012078.b #31	ENSGT00940000156229 #32	ENSGT00950000183175.B.b #33	ENSGT00390000017459 #34	ENSGT00940000158581 #36
Poecilia	ANCESTRAL SPECIES	12	ENSGT00530000062932	ENSGT00940000158763 #8	ENSGT00940000154787 #7	ENSGT00940000154416.C.c.a.a.a #9	ENSGT00940000153306.A.a #10	ENSGT00940000156654 #11	ENSGT00390000003140.B #14	ENSGT00940000160949 #13	ENSGT01030000234570.d.b.a.b.a.d.b #15	ENSGT00940000158084 #16	ENSGT01010000222537 #17	ENSGT00940000158325 #18	ENSGT00940000154667.a #19	ENSGT00940000160316 #20	ENSGT00560000078707 #21	ENSGT00940000159244.b #22	ENSGT00940000165854	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147.c.b #25	ENSGT00950000183161.a.b #26	ENSGT00390000012662	ENSGT00390000008519.lc #27	ENSGT00940000157066.p #28	ENSGT00390000018845.e #29	ENSGT00940000156411 #30	ENSGT00390000012078.b #31	ENSGT00940000156229 #32	ENSGT00950000183175.B.b #33	ENSGT00390000017459 #34	ENSGT00940000158581 #36
NAME_6	ANCESTRAL SPECIES	13											ENSGT01010000222537 #17	ENSGT00940000158325 #18	ENSGT00940000154667.a #19	ENSGT00940000160316 #20	ENSGT00560000078707 #21	ENSGT00940000159244.b #22	ENSGT00940000165854	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147.c.b #25	ENSGT00950000183161.a.b #26	ENSGT00390000012662	ENSGT00390000008519.lc #27	ENSGT00940000157066.p #28	ENSGT00390000018845.e #29	ENSGT00940000156411 #30	ENSGT00390000012078.b #31	ENSGT00940000156229 #32	ENSGT00950000183175.B.b #33	ENSGT00390000017459 #34	ENSGT00940000158581 #36
Amazon molly	MODERN SPECIES	351									ENSPFOG00000011337 #17	ak1 (ENSPFOG00000024615) #18	gpsm1b (ENSPFOG00000011156) #19	ak1 (ENSPFOG00000011110) #18	ak1 (ENSPFOG00000011274) #18	gpsm1b (ENSPFOG00000011026) #19	LHX3 (ENSPFOG00000010956) #20	NACC2 (ENSPFOG00000010890) #22	NUP214 (ENSPFOG00000010653) #23	fam78ab (ENSPFOG00000010633) #24	PLPP7 (ENSPFOG00000010610) #25	PRRC2B (ENSPFOG00000010446) #26	ENSPFOG00000010439	edf1 (ENSPFOG00000010394) #27	PRAG1 (ENSPFOG00000010376) #28	TMEM38B (ENSPFOG00000010363) #29	ZNF462 (ENSPFOG00000010276) #30	RAD23B (ENSPFOG00000010219) #31	klf4 (ENSPFOG00000010204) #32	ENSPFOG00000010167 #33	nop14 (ENSPFOG00000009859) #34	add1 (ENSPFOG00000009681) #36	SEMA4D (ENSPFOG00000009498) #37
Guppy	MODERN SPECIES	442	golga2 (ENSPREG00000015832)	hspa5 (ENSPREG00000015941) #7	rabepk (ENSPREG00000015988) #8	ENSPREG00000016039 #9	znf618 (ENSPREG00000016147) #10	pappaa (ENSPREG00000016205) #11	ASTN2 (ENSPREG00000016294) #14	trim32 (ENSPREG00000016376) #13	ENSPREG00000016389 #15	brinp1 (ENSPREG00000016405) #16	ENSPREG00000016434 #17	ak1 (ENSPREG00000016472) #18	gpsm1b (ENSPREG00000016502) #19	LHX3 (ENSPREG00000016521) #20	TMEM250 (ENSPREG00000016544) #21	NACC2 (ENSPREG00000016554) #22	ENSPREG00000016577	fam78ab (ENSPREG00000016618) #24	PLPP7 (ENSPREG00000016627) #25	PRRC2B (ENSPREG00000016681) #26	edf1 (ENSPREG00000016717) #27	PRAG1 (ENSPREG00000016738) #28	TMEM38B (ENSPREG00000016764) #29	ZNF462 (ENSPREG00000016811) #30	RAD23B (ENSPREG00000016845) #31	ENSPREG00000016880	ENSPREG00000016906 #33	nop14 (ENSPREG00000016921) #34	add1 (ENSPREG00000016958) #36	SEMA4D (ENSPREG00000017038) #37	ENSPREG00000017135
Platyfish	MODERN SPECIES	22	rabepk (ENSXMAG00000027947) #8	hspa5 (ENSXMAG00000005672) #7	ENSXMAG00000026805 #9	znf618 (ENSXMAG00000023810) #10	pappaa (ENSXMAG00000005728) #11	ASTN2 (ENSXMAG00000005754) #14	trim32 (ENSXMAG00000005801) #13	ENSXMAG00000026027	MYL4 (ENSXMAG00000019800) #15	brinp1 (ENSXMAG00000011281) #16	ENSXMAG00000025101	ak1 (ENSXMAG00000011293) #18	gpsm1b (ENSXMAG00000011298) #19	LHX3 (ENSXMAG00000011308) #20	TMEM250 (ENSXMAG00000019658) #21	NACC2 (ENSXMAG00000011321) #22	ENSXMAG00000011331	fam78ab (ENSXMAG00000011364) #24	PLPP7 (ENSXMAG00000011366) #25	PRRC2B (ENSXMAG00000011367) #26	edf1 (ENSXMAG00000011377) #27	PRAG1 (ENSXMAG00000011386) #28	TMEM38B (ENSXMAG00000011387) #29	ZNF462 (ENSXMAG00000014102) #30	RAD23B (ENSXMAG00000014116) #31	klf4 (ENSXMAG00000014131) #32	SNCA (ENSXMAG00000024787) #33	nop14 (ENSXMAG00000014137) #34	add1 (ENSXMAG00000014168) #36	SEMA4D (ENSXMAG00000014192) #37	ENSXMAG00000029847
NAME_4	ANCESTRAL SPECIES		ENSGT00530000062932	ENSGT00940000154787 #7	ENSGT00940000158763 #8	ENSGT00940000154416.C.c.a.a.a #9	ENSGT00940000153306.A.a #10	ENSGT00940000156654 #11	ENSGT00940000160949 #13	ENSGT00390000003140.B #14	ENSGT01030000234570.d.b.a.b.a.d.b #15	ENSGT00940000158084 #16	ENSGT01010000222537 #17	ENSGT00940000158325 #18	ENSGT00940000154667.a #19	ENSGT00940000160316 #20	ENSGT00560000078707 #21	ENSGT00940000159244.b #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147.c.b #25	ENSGT00950000183161.a.b #26	ENSGT00390000008519.lc #27	ENSGT00940000157066.p #28	ENSGT00390000018845.e #29	ENSGT00940000156411 #30	ENSGT00390000012078.b #31	ENSGT00940000156229 #32	ENSGT00950000183175.B.b #33	ENSGT00390000017459 #34	ENSGT00940000158581 #36	ENSGT00940000159594 #37	ENSGT00950000182971.B.a.b
Sheepshead minnow	MODERN SPECIES	135	hspa5 (ENSCVAG00000017727) #7	rabepk (ENSCVAG00000017740) #8	ENSCVAG00000017761 #9	ENSCVAG00000017797 #9	znf618 (ENSCVAG00000017820) #10	pappaa (ENSCVAG00000017894) #11	trim32 (ENSCVAG00000017898) #13	ASTN2 (ENSCVAG00000017985) #14	ENSCVAG00000018005 #15	brinp1 (ENSCVAG00000018046) #16	ENSCVAG00000018058 #17	ak1 (ENSCVAG00000000473) #18	gpsm1b (ENSCVAG00000018102) #19	LHX3 (ENSCVAG00000018141) #20	TMEM250 (ENSCVAG00000018150) #21	NACC2 (ENSCVAG00000018166) #22	NUP214 (ENSCVAG00000018228) #23	fam78ab (ENSCVAG00000000476) #24	PLPP7 (ENSCVAG00000018250) #25	PRRC2B (ENSCVAG00000018270) #26	edf1 (ENSCVAG00000018293) #27	PRAG1 (ENSCVAG00000018337) #28	ENSCVAG00000018347 #29
Mummichog	MODERN SPECIES	2258										brinp1 (ENSFHEG00000003694) #16	ENSFHEG00000003704 #17	ak1 (ENSFHEG00000003728) #18	gpsm1b (ENSFHEG00000003770) #19	LHX3 (ENSFHEG00000003789) #20	TMEM250 (ENSFHEG00000003795) #21	NACC2 (ENSFHEG00000003810) #22	NUP214 (ENSFHEG00000003919) #23	fam78ab (ENSFHEG00000003934) #24	PLPP7 (ENSFHEG00000003939) #25	ENSFHEG00000003958 #26	edf1 (ENSFHEG00000003984) #27	PRAG1 (ENSFHEG00000004001) #28	TMEM38B (ENSFHEG00000004019) #29	ZNF462 (ENSFHEG00000004025) #30	RAD23B (ENSFHEG00000004033) #31	klf4 (ENSFHEG00000004035) #32	ENSFHEG00000004044	nop14 (ENSFHEG00000004060) #34	add1 (ENSFHEG00000004081) #36	SEMA4D (ENSFHEG00000004122) #37	ENSFHEG00000004145
Oryzias	ANCESTRAL SPECIES	9	ENSGT00530000062932	ENSGT00940000154787 #7	ENSGT00940000158763 #8	ENSGT00940000154416.C.c.a.a.a #9	ENSGT00940000153306.A.a #10	ENSGT00940000156654 #11	ENSGT00940000160949 #13	ENSGT00390000003140.B #14	ENSGT01030000234570.d.b.a.b.a.d.b #15	ENSGT00940000158084 #16	ENSGT01010000222537 #17	ENSGT00940000158325 #18	ENSGT00940000154667.a #19	ENSGT00940000160316 #20	ENSGT00560000078707 #21	ENSGT00940000159244.b #22	ENSGT00940000165854	ENSGT00390000018059.a #24	ENSGT00940000157147.c.b #25	ENSGT01100000263525.a.a	ENSGT00940000160508	ENSGT01030000234518.B.a.a.c	ENSGT00950000182914.a.b	ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00950000182974.a.b	ENSGT01050000244842.b	ENSGT01050000244842.a.b.a.o
Oryzias_b	ANCESTRAL SPECIES	4	ENSGT00530000062932	ENSGT00940000154787 #7	ENSGT00940000158763 #8	ENSGT00940000154416.C.c.a.a.a #9	ENSGT00940000153306.A.a #10	ENSGT00940000156654 #11	ENSGT00940000160949 #13	ENSGT00390000003140.B #14	ENSGT01030000234570.d.b.a.b.a.d.b #15	ENSGT00940000158084 #16	ENSGT01010000222537 #17	ENSGT00940000158325 #18	ENSGT00940000154667.a #19	ENSGT00940000160316 #20	ENSGT00560000078707 #21	ENSGT00940000159244.b #22	ENSGT00940000165854	ENSGT00390000018059.a #24	ENSGT00940000157147.c.b #25	ENSGT01100000263525.a.a	ENSGT00940000160508	ENSGT01030000234518.B.a.a.c	ENSGT00950000182914.a.b	ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00950000182974.a.b	ENSGT00940000157583	ENSGT01050000244842.a.a.b.b.b.h.b.b
Indian medaka	MODERN SPECIES	30	golga2 (ENSOMEG00000004569)	hspa5 (ENSOMEG00000004620) #7	rabepk (ENSOMEG00000004670) #8	ENSOMEG00000004737 #9	znf618 (ENSOMEG00000004781) #10	pappaa (ENSOMEG00000004852) #11	trim32 (ENSOMEG00000004877) #13	ASTN2 (ENSOMEG00000004936) #14	MYL4 (ENSOMEG00000004952) #15	brinp1 (ENSOMEG00000004973) #16	ENSOMEG00000005019 #17	ak1 (ENSOMEG00000000964) #18	gpsm1b (ENSOMEG00000005082) #19	LHX3 (ENSOMEG00000005115) #20	TMEM250 (ENSOMEG00000005124) #21	NACC2 (ENSOMEG00000005153) #22	ENSOMEG00000005250	fam78ab (ENSOMEG00000005281) #24	PLPP7 (ENSOMEG00000005313) #25	gng10 (ENSOMEG00000005330)	btc (ENSOMEG00000005343)	RXFP3 (ENSOMEG00000005354)	slc45a2 (ENSOMEG00000005370)	amacr (ENSOMEG00000005399)	ENSOMEG00000005437	ENSOMEG00000005463	NUP54 (ENSOMEG00000005535)	PPEF2 (ENSOMEG00000005717)	ENSOMEG00000005758	ENSOMEG00000005799	ENSOMEG00000005815
Javanese ricefish	MODERN SPECIES	3	golga2 (ENSOJAG00000015292)	hspa5 (ENSOJAG00000015448) #7	rabepk (ENSOJAG00000015559) #8	rgs3a (ENSOJAG00000015607) #9	znf618 (ENSOJAG00000015634) #10	pappaa (ENSOJAG00000015720) #11	ASTN2 (ENSOJAG00000015886) #14	trim32 (ENSOJAG00000016301) #13	ENSOJAG00000016312 #15	brinp1 (ENSOJAG00000016318) #16	ENSOJAG00000016335 #17	ak1 (ENSOJAG00000016355) #18	gpsm1b (ENSOJAG00000016399) #19	LHX3 (ENSOJAG00000016611) #20	TMEM250 (ENSOJAG00000016666) #21	NACC2 (ENSOJAG00000016678) #22	ENSOJAG00000016838	fam78ab (ENSOJAG00000016866) #24	PLPP7 (ENSOJAG00000016879) #25	gng10 (ENSOJAG00000016885)	btc (ENSOJAG00000016936)	RXFP3 (ENSOJAG00000016945)	slc45a2 (ENSOJAG00000016967)	amacr (ENSOJAG00000016991)	ENSOJAG00000017032	NUP54 (ENSOJAG00000017468)	PPEF2 (ENSOJAG00000017551)	ENSOJAG00000017621	ENSOJAG00000017632	ENSOJAG00000017708	ENSOJAG00000017831
Cichlidae	ANCESTRAL SPECIES	10	ENSGT00530000062932	ENSGT00940000154787 #7	ENSGT00940000158763 #8	ENSGT00940000154416.C.c.a.a.a #9	ENSGT00940000153306.A.a #10	ENSGT00940000156654 #11	ENSGT00390000003140.B #14	ENSGT00940000160949 #13	ENSGT01030000234570.d.b.a.b.a.d.b #15	ENSGT00940000158084 #16	ENSGT00530000063861.b.a	ENSGT00940000158325 #18	ENSGT00940000154667.a #19	ENSGT00940000160316 #20	ENSGT00560000078707 #21	ENSGT00940000159244.b #22	ENSGT00940000165854	ENSGT00390000018059.a #24	ENSGT00940000157147.c.b #25	ENSGT00950000183161.a.b #26	ENSGT00390000008519.lc #27	ENSGT00940000157066.p #28	ENSGT00390000018845.e #29	ENSGT00940000156411 #30	ENSGT00390000012078.b #31	ENSGT00940000156229 #32	ENSGT00950000183175.B.b #33	ENSGT00390000017459 #34	ENSGT00940000163043.g	ENSGT00940000164162.s	ENSGT00940000158581 #36
Pseudocrenilabrinae	ANCESTRAL SPECIES		ENSGT00530000062932	ENSGT00940000154787.m.a #7	ENSGT00940000158763 #8	ENSGT00940000154416.C.c.a.a.a #9	ENSGT00940000153306.A.a #10	ENSGT00940000156654 #11	ENSGT00390000003140.B #14	ENSGT00940000160949 #13	ENSGT01030000234570.d.b.a.b.a.d.b #15	ENSGT00940000158084 #16	ENSGT00530000063861.b.a	ENSGT00940000158325 #18	ENSGT00940000154667.a #19	ENSGT00940000160316 #20	ENSGT00560000078707 #21	ENSGT00940000159244.b #22	ENSGT00940000165854	ENSGT00390000018059.a #24	ENSGT00940000157147.c.b #25	ENSGT00950000183161.a.b #26	ENSGT00390000008519.lc #27	ENSGT00940000157066.p #28	ENSGT00390000018845.e #29	ENSGT00940000156411 #30	ENSGT00390000012078.b #31	ENSGT00940000156229 #32	ENSGT00950000183175.B.b #33	ENSGT00390000017459 #34	ENSGT00940000163043.g	ENSGT00940000164162.s	ENSGT00940000158581 #36
Haplochromini	ANCESTRAL SPECIES		ENSGT00530000062932	ENSGT00940000154787.m.a #7	ENSGT00940000158763 #8	ENSGT00940000154416.C.c.a.a.a #9	ENSGT00940000153306.A.a #10	ENSGT00940000156654 #11	ENSGT00390000003140.B #14	ENSGT00940000160949 #13	ENSGT01030000234570.d.b.a.b.a.d.b #15	ENSGT00940000158084 #16	ENSGT00530000063861.b.a	ENSGT00940000158325 #18	ENSGT00940000154667.a #19	ENSGT00940000160316 #20	ENSGT00560000078707 #21	ENSGT00940000159244.b #22	ENSGT00940000165854	ENSGT00390000018059.a #24	ENSGT00940000157147.c.b #25	ENSGT00950000183161.a.b #26	ENSGT00390000008519.lc #27	ENSGT00940000157066.p #28	ENSGT00390000018845.e #29	ENSGT00940000156411 #30	ENSGT00390000012078.b #31	ENSGT00940000156229 #32	ENSGT00950000183175.B.b #33	ENSGT00390000017459 #34	ENSGT00940000163043.g	ENSGT00940000164162.s	ENSGT00940000158581 #36
Burton s mouthbrooder	MODERN SPECIES	397										brinp1 (ENSHBUG00000018914) #16	ENSHBUG00000018883	ak1 (ENSHBUG00000018870) #18	gpsm1b (ENSHBUG00000018847) #19	LHX3 (ENSHBUG00000018836) #20	TMEM250 (ENSHBUG00000018796) #21	NACC2 (ENSHBUG00000018783) #22	ENSHBUG00000018760	fam78ab (ENSHBUG00000018731) #24	PLPP7 (ENSHBUG00000018715) #25	PRRC2B (ENSHBUG00000018699) #26	edf1 (ENSHBUG00000018604) #27	PRAG1 (ENSHBUG00000000879) #28	TMEM38B (ENSHBUG00000018578) #29	ZNF462 (ENSHBUG00000018566) #30	RAD23B (ENSHBUG00000018549) #31	klf4 (ENSHBUG00000018535) #32	ENSHBUG00000018523 #33	nop14 (ENSHBUG00000018508) #34	ENSHBUG00000018478	ENSHBUG00000018431	add1 (ENSHBUG00000001006) #36
Haplochromini_B	ANCESTRAL SPECIES	4	ENSGT00940000154787.m.a.a #7	ENSGT00940000158763 #8	ENSGT00940000154416.C.c.a.a.a #9	ENSGT00940000153306.A.a #10	ENSGT00940000156654 #11	ENSGT00390000003140.B #14	ENSGT00940000160949 #13	ENSGT00940000158431.a.a.a.a.a.b.b.c.a.c.a.a	ENSGT01030000234570.d.b.a.b.a.d.b #15	ENSGT00940000158084 #16	ENSGT00530000063861.b.a	ENSGT00940000158325 #18	ENSGT00940000154667.a #19	ENSGT00940000160316 #20	ENSGT00560000078707 #21	ENSGT00940000159244.b #22	ENSGT00940000165854	ENSGT00390000018059.a #24	ENSGT00940000157147.c.b #25	ENSGT00950000183161.a.b #26	ENSGT00390000008519.lc #27	ENSGT00940000157066.p #28	ENSGT00390000018845.e #29	ENSGT00940000156411 #30	ENSGT00390000012078.b #31	ENSGT00940000156229 #32	ENSGT00950000183175.B.b #33	ENSGT00390000017459 #34	ENSGT00940000163043.g	ENSGT00940000164162.s	ENSGT00940000158581 #36
Lyretail cichlid	MODERN SPECIES	304	rabepk (ENSNBRG00000007333) #8	ENSNBRG00000007353 #7	ENSNBRG00000007378 ##9	rgs3a (ENSNBRG00000007426) #9	znf618 (ENSNBRG00000007434) #10	pappaa (ENSNBRG00000007479) #11	ASTN2 (ENSNBRG00000007542) #14	trim32 (ENSNBRG00000007621) #13	ENSNBRG00000007630 #15	brinp1 (ENSNBRG00000007641) #16	ENSNBRG00000007664	ak1 (ENSNBRG00000007689) #18	gpsm1b (ENSNBRG00000007717) #19	LHX3 (ENSNBRG00000007742) #20	TMEM250 (ENSNBRG00000007770) #21	NACC2 (ENSNBRG00000007781) #22	NUP214 (ENSNBRG00000007835) #23	fam78ab (ENSNBRG00000008016) #24	PLPP7 (ENSNBRG00000008042) #25	PRRC2B (ENSNBRG00000008064) #26	TMEM38B (ENSNBRG00000008094) #29	ZNF462 (ENSNBRG00000008118) #30	rad23b (ENSNBRG00000008152) #31	klf4 (ENSNBRG00000008168) #32	ENSNBRG00000008179 #33	nop14 (ENSNBRG00000008215) #34	ENSNBRG00000008277	ENSNBRG00000008384	add1 (ENSNBRG00000008443) #36	SEMA4D (ENSNBRG00000008501) #37	ENSNBRG00000008525
Nile tilapia	MODERN SPECIES	19	golga2 (ENSONIG00000002830)	hspa5 (ENSONIG00000039112) #7	rabepk (ENSONIG00000037252) #8	ENSONIG00000015006 #9	znf618 (ENSONIG00000015003) #10	pappaa (ENSONIG00000015000) #11	trim32 (ENSONIG00000020998) #13	ASTN2 (ENSONIG00000014991) #14	ENSONIG00000020997 #15	brinp1 (ENSONIG00000014989) #16	ENSONIG00000027713	ak1 (ENSONIG00000014988) #18	gpsm1b (ENSONIG00000014985) #19	LHX3 (ENSONIG00000014981) #20	TMEM250 (ENSONIG00000031991) #21	NACC2 (ENSONIG00000014979) #22	ENSONIG00000014974	fam78ab (ENSONIG00000014973) #24	PLPP7 (ENSONIG00000014972) #25	PRRC2B (ENSONIG00000014969) #26	edf1 (ENSONIG00000014967) #27	PRAG1 (ENSONIG00000039500) #28	TMEM38B (ENSONIG00000014963) #29	ZNF462 (ENSONIG00000014962) #30	rad23b (ENSONIG00000014959) #31	klf4 (ENSONIG00000014958) #32	ENSONIG00000014957 #33	nop14 (ENSONIG00000014954) #34	ENSONIG00000005561	add1 (ENSONIG00000007765) #36	SEMA4D (ENSONIG00000007764) #37
Midas cichlid	MODERN SPECIES	352	ankrd46b (ENSACIG00000018632)	ENSACIG00000018559	ENSACIG00000018525	ENSACIG00000018513	ENSACIG00000018492	gc2 (ENSACIG00000018447)	rasl11a (ENSACIG00000018406)	ENSACIG00000018379	arhgap36 (ENSACIG00000018347)	brinp1 (ENSACIG00000018332) #16	ENSACIG00000018316 #17	ak1 (ENSACIG00000018301) #18	gpsm1b (ENSACIG00000018217) #19	LHX3 (ENSACIG00000018176) #20	TMEM250 (ENSACIG00000018168) #21	NACC2 (ENSACIG00000018147) #22	ENSACIG00000018085	fam78ab (ENSACIG00000018067) #24	PLPP7 (ENSACIG00000018056) #25	PRRC2B (ENSACIG00000017975) #26	edf1 (ENSACIG00000017965) #27	PRAG1 (ENSACIG00000017926) #28	TMEM38B (ENSACIG00000017898) #29	ZNF462 (ENSACIG00000017876) #30	RAD23B (ENSACIG00000017797) #31	klf4 (ENSACIG00000017761) #32	ENSACIG00000017740 #33	nop14 (ENSACIG00000017590) #34	ENSACIG00000017510	ENSACIG00000017487	add1 (ENSACIG00000017459) #36
Pomacentridae	ANCESTRAL SPECIES	12	ENSGT00530000062932	ENSGT00940000154787 #7	ENSGT00940000158763 #8	ENSGT00940000154416.C.c.a.a.a #9	ENSGT00940000153306.A.a #10	ENSGT00940000156654 #11	ENSGT00940000160949 #13	ENSGT00390000003140.B #14	ENSGT01030000234570.d.b.a.b.a.d.b #15	ENSGT00940000158084 #16	ENSGT00530000063861.b.a	ENSGT00940000158325 #18	ENSGT00940000154667.a #19	ENSGT00940000160316 #20	ENSGT00560000078707 #21	ENSGT00940000159244.b #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147.c.b #25	ENSGT00950000183161.a.b #26	ENSGT00390000008519.lc #27	ENSGT00940000157066.p #28	ENSGT00390000018845.e #29	ENSGT00940000156411 #30	ENSGT00390000012078.b #31	ENSGT00940000156229 #32	ENSGT00950000183175.B.b #33	ENSGT00390000017459 #34	ENSGT00940000158581 #36	ENSGT00940000159594 #37	ENSGT00950000182971.B.a.b
Pomacentridae_A	ANCESTRAL SPECIES	10	ENSGT00940000158763 #8	ENSGT00940000154416.C.c.a.a.a #9	ENSGT00940000153306.A.a #10	ENSGT00940000156654 #11	ENSGT00390000003140.B.y.a #14	ENSGT00390000003140.B.y.b #14	ENSGT00940000160949 #13	ENSGT00390000003140.B.z #14	ENSGT01030000234570.d.b.a.b.a.d.b #15	ENSGT00940000158084 #16	ENSGT00530000063861.b.a	ENSGT00940000158325 #18	ENSGT00940000154667.a #19	ENSGT00940000160316 #20	ENSGT00560000078707 #21	ENSGT00940000159244.b #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147.c.b #25	ENSGT00950000183161.a.b #26	ENSGT00390000008519.lc #27	ENSGT00940000157066.p #28	ENSGT00390000018845.e #29	ENSGT00940000156411 #30	ENSGT00390000012078.b #31	ENSGT00940000156229 #32	ENSGT00950000183175.B.b #33	ENSGT00390000017459 #34	ENSGT00940000158581 #36	ENSGT00940000159594 #37	ENSGT00950000182971.B.a.b
Amphiprion	ANCESTRAL SPECIES	5	ENSGT00940000158763 #8	ENSGT00940000154416.C.c.a.a.a #9	ENSGT00940000153306.A.a #10	ENSGT00940000156654 #11	ENSGT00390000003140.B.y.a #14	ENSGT00390000003140.B.y.b #14	ENSGT00940000160949 #13	ENSGT01030000234570.d.b.a.b.a.d.b #15	ENSGT00940000182116	ENSGT00940000158084 #16	ENSGT00530000063861.b.a	ENSGT00940000158325 #18	ENSGT00940000154667.a #19	ENSGT00940000160316 #20	ENSGT00560000078707 #21	ENSGT00940000159244.b #22	ENSGT00940000153253.b.b #23	ENSGT00390000018059.a #24	ENSGT00940000157147.c.b #25	ENSGT00950000183161.a.b #26	ENSGT00390000008519.lc #27	ENSGT00940000157066.p #28	ENSGT00390000018845.e #29	ENSGT00940000156411 #30	ENSGT00390000012078.b #31	ENSGT00940000156229 #32	ENSGT00950000183175.B.b #33	ENSGT00390000017459 #34	ENSGT00940000158581 #36	ENSGT00940000159594 #37	ENSGT00950000182971.B.a.b
Clown anemonefish	MODERN SPECIES	1645								MYL4 (ENSAOCG00000015115) #15	ENSAOCG00000015131	brinp1 (ENSAOCG00000015162) #16	ENSAOCG00000015172	ak1 (ENSAOCG00000015229) #18	gpsm1b (ENSAOCG00000015297) #19	LHX3 (ENSAOCG00000015329) #20	TMEM250 (ENSAOCG00000015338) #21	NACC2 (ENSAOCG00000015392) #22	NUP214 (ENSAOCG00000015457) #23	fam78ab (ENSAOCG00000015484) #24	PLPP7 (ENSAOCG00000015502) #25	PRRC2B (ENSAOCG00000015539) #26
Orange clownfish	MODERN SPECIES	7	hspa5 (ENSAPEG00000015641) #7	HSPA5 (ENSAPEG00000015695) #7	ENSAPEG00000015721 #9	ENSAPEG00000015749 #9	znf618 (ENSAPEG00000015770) #10	pappaa (ENSAPEG00000015801) #11	ASTN2 (ENSAPEG00000015932) #14	trim32 (ENSAPEG00000016012) #13	MYL4 (ENSAPEG00000016034) #15	ENSAPEG00000016050	brinp1 (ENSAPEG00000016081) #16	ENSAPEG00000016115	ak1 (ENSAPEG00000016123) #18	gpsm1b (ENSAPEG00000016148) #19	LHX3 (ENSAPEG00000016182) #20	NACC2 (ENSAPEG00000016216) #22	NUP214 (ENSAPEG00000016262) #23	fam78ab (ENSAPEG00000016285) #24	PLPP7 (ENSAPEG00000016301) #25	PRRC2B (ENSAPEG00000016332) #26	edf1 (ENSAPEG00000016362) #27	PRAG1 (ENSAPEG00000016377) #28	ENSAPEG00000016441	TMEM38B (ENSAPEG00000016459) #29	ZNF462 (ENSAPEG00000016470) #30	RAD23B (ENSAPEG00000016497) #31	klf4 (ENSAPEG00000016549) #32	ENSAPEG00000016565	ENSAPEG00000016574 #33	nop14 (ENSAPEG00000016589) #34	add1 (ENSAPEG00000016672) #36
Spiny chromis	MODERN SPECIES	20										brinp1 (ENSAPOG00000019262) #16	ENSAPOG00000019290 #17	ak1 (ENSAPOG00000019337) #18	gpsm1b (ENSAPOG00000019348) #19	LHX3 (ENSAPOG00000019406) #20	TMEM250 (ENSAPOG00000019414) #21	NACC2 (ENSAPOG00000019473) #22	NUP214 (ENSAPOG00000019492) #23	fam78ab (ENSAPOG00000000546) #24	PLPP7 (ENSAPOG00000019517) #25	PRRC2B (ENSAPOG00000019642) #26	edf1 (ENSAPOG00000019666) #27	PRAG1 (ENSAPOG00000019714) #28	TMEM38B (ENSAPOG00000019724) #29	ZNF462 (ENSAPOG00000019731) #30	rad23b (ENSAPOG00000019741) #31	klf4 (ENSAPOG00000019757) #32	SNCA (ENSAPOG00000019778) #33	nop14 (ENSAPOG00000019863) #34	add1 (ENSAPOG00000019978) #36	SEMA4D (ENSAPOG00000020034) #37	ENSAPOG00000000571