Tetrapoda	ANCESTRAL SPECIES	17		ENSGT00940000162658.a.a	ENSGT00940000157274	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00390000011010.a.b	ENSGT00940000157514.b	ENSGT00940000159378 #12	ENSGT00940000160543 #14	ENSGT01030000234543.B #13	ENSGT00940000164766	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00940000165908	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276
Amniota	ANCESTRAL SPECIES	10	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000175675	ENSGT00390000011010.a.b	ENSGT00940000157514.b	ENSGT00940000159378 #12	ENSGT01030000234543.B #13	ENSGT00940000160543 #14	ENSGT00940000164766	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00940000170166	ENSGT00940000165236	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00940000165908	ENSGT00950000183033.a.a.d #37
Mammalia	ANCESTRAL SPECIES	34	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B #13	ENSGT00940000160543 #14	ENSGT00940000164766	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00940000170166	ENSGT00940000165236	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b
Theria	ANCESTRAL SPECIES	21	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B #13	ENSGT00940000160543 #14	ENSGT00940000164766	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00940000170166	ENSGT00940000165236	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b
Eutheria	ANCESTRAL SPECIES	13	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B #13	ENSGT00940000160543 #14	ENSGT00940000182429	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00940000170166	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276
Boreoeutheria	ANCESTRAL SPECIES	16	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT01030000234543.B.e.b ##13	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00940000170166	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00900000143228	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b
Euarchontoglires	ANCESTRAL SPECIES	16	ENSGT00940000157520	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00940000170166	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00530000066649	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00900000143228
Primates	ANCESTRAL SPECIES	16	ENSGT00940000157520	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00530000066649	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00900000143228	ENSGT00950000183033.a.a.d #37
Haplorrhini	ANCESTRAL SPECIES	11	ENSGT00940000157520	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00530000066649	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b
Simiiformes	ANCESTRAL SPECIES	17	ENSGT00940000157520	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984.t.a #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00510000055172 #24	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00530000066649	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37
Catarrhini	ANCESTRAL SPECIES	18	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000163824	ENSGT00940000159378 #12	ENSGT01030000234543.B.e.a ##13	ENSGT00940000164182.a.b	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984.t.a #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00510000055172 #24	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00530000066649	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00390000004279.o.b
Hominoidea	ANCESTRAL SPECIES	11	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000163824	ENSGT00940000159378 #12	ENSGT00940000154773.p	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984.t.b ##21	ENSGT00390000000984.t.a.a #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00510000055172 #24	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00530000066649	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00390000004279.o.b
Hominidae	ANCESTRAL SPECIES	13	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000155046.t.h	ENSGT00940000159406 #11	ENSGT00940000163824	ENSGT00940000159378 #12	ENSGT00940000154773.p	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984.t.b ##21	ENSGT00390000000984.t.a.a #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00510000055172 #24	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00530000066649	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00390000004279.o.b
Orangutan	MODERN SPECIES	1	PBLD (ENSPPYG00000002398) #7	ATOH7 (ENSPPYG00000030559) #8	MYPN (ENSPPYG00000002399) #9	HERC4 (ENSPPYG00000002400) #10	SIRT1 (ENSPPYG00000002401) #11	DNAJC12 (ENSPPYG00000002402) #12	CTNNA3 (ENSPPYG00000002404) #13	LRRTM3 (ENSPPYG00000002405) #14	ENSPPYG00000002406 #15	ENSPPYG00000040675 #16	ENSPPYG00000030513 #17	REEP3 (ENSPPYG00000035618) #18	JMJD1C (ENSPPYG00000002410) #19	ENSPPYG00000035029 #20	NRBF2 (ENSPPYG00000002411) #21	EGR2 (ENSPPYG00000002412) #22	ADO (ENSPPYG00000002413) #23	ENSPPYG00000002414 #24	ZNF365 (ENSPPYG00000002415) #25	RTKN2 (ENSPPYG00000002416) #26	ARID5B (ENSPPYG00000002417) #27	CABCOCO1 (ENSPPYG00000002418) #28	TMEM26 (ENSPPYG00000002419) #29	RHOBTB1 (ENSPPYG00000002420) #30	CDK1 (ENSPPYG00000002421) #31	ANK3 (ENSPPYG00000002423) #32	ENSPPYG00000002422 #33	CCDC6 (ENSPPYG00000002424) #34	MRLN (ENSPPYG00000033622) #35	SLC16A9 (ENSPPYG00000002425) #36	FAM13C (ENSPPYG00000002426) #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	17	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000155046.t.h	ENSGT00940000159406 #11	ENSGT00940000163824.a	ENSGT00940000159378 #12	ENSGT00940000154773.p	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00940000158794 #18	ENSGT00950000182810.B.a.x.b.a	ENSGT00940000156272.h	ENSGT00940000158210 #19	ENSGT00390000000984.t.b ##21	ENSGT00390000000984.t.a.a #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00510000055172 #24	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00530000066649	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00390000004279.o.b
Gorilla	MODERN SPECIES	1	HERC4 (ENSGGOG00000008249) #10	SIRT1 (ENSGGOG00000010187) #11	DNAJC12 (ENSGGOG00000015053) #12	ENSGGOG00000025461	CTNNA3 (ENSGGOG00000039427) #13	LRRTM3 (ENSGGOG00000026152) #14	ENSGGOG00000042340	ENSGGOG00000006481 ##15	ENSGGOG00000022173	ENSGGOG00000025516	REEP3 (ENSGGOG00000008217) #18	ENSGGOG00000025033	JMJD1C (ENSGGOG00000015694) #19	ENSGGOG00000040996	ENSGGOG00000013016 ##21	EGR2 (ENSGGOG00000005292) #22	ADO (ENSGGOG00000005286) #23	ENSGGOG00000041727 #24	ZNF365 (ENSGGOG00000013216) #25	RTKN2 (ENSGGOG00000016938) #26	ARID5B (ENSGGOG00000004127) #27	ENSGGOG00000011328 #28	TMEM26 (ENSGGOG00000003595) #29	CDK1 (ENSGGOG00000013311) #31	ENSGGOG00000006954 #33	ANK3 (ENSGGOG00000003939) #32	CCDC6 (ENSGGOG00000013697) #34	MRLN (ENSGGOG00000042386) #35	SLC16A9 (ENSGGOG00000004136) #36	FAM13C (ENSGGOG00000008904) #37	PHYHIPL (ENSGGOG00000008898)
Homo/Pan group	ANCESTRAL SPECIES	18	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000155046.t.h	ENSGT00940000159406 #11	ENSGT00940000163824.a	ENSGT00940000159378 #12	ENSGT00940000154773.p	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00940000158794 #18	ENSGT00950000182810.B.a.x.b.a	ENSGT00940000156272.h	ENSGT00940000158210 #19	ENSGT00390000000984.t.a.a #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00510000055172 #24	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00530000066649	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00390000004279.o.b
Pan	ANCESTRAL SPECIES	16	ENSGT00940000159406 #11	ENSGT00940000163824.a	ENSGT00940000159378 #12	ENSGT00940000154773.p	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT01030000234570.d.b.a.a.a.b.a.b.a	ENSGT00940000154257.i.a.b ##15	ENSGT00530000063909.b.o	ENSGT00940000158794 #18	ENSGT00950000182810.B.a.x.b.a	ENSGT00940000156272.h	ENSGT00940000158210 #19	ENSGT00390000000984.t.b ##21	ENSGT00390000000984.t.a.a #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00510000055172 #24	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00530000066649	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00390000004279.o.b
Bonobo	MODERN SPECIES	1	SIRT1 (ENSPPAG00000026426) #11	ENSPPAG00000042412	DNAJC12 (ENSPPAG00000000220) #12	ENSPPAG00000024995	LRRTM3 (ENSPPAG00000038363) #14	CTNNA3 (ENSPPAG00000036801) #13	ENSPPAG00000038968	ENSPPAG00000030704 ##15	ENSPPAG00000030313	ENSPPAG00000030172	REEP3 (ENSPPAG00000014795) #18	ENSPPAG00000029932	ENSPPAG00000040277	JMJD1C (ENSPPAG00000043117) #19	ENSPPAG00000028338 ##21	EGR2 (ENSPPAG00000036067) #22	ENSPPAG00000026642 #24	ZNF365 (ENSPPAG00000034684) #25	RTKN2 (ENSPPAG00000032579) #26	ARID5B (ENSPPAG00000038387) #27	ENSPPAG00000043572 #28	TMEM26 (ENSPPAG00000042231) #29	RHOBTB1 (ENSPPAG00000043669) #30	CDK1 (ENSPPAG00000040220) #31	ENSPPAG00000040138 #33	ANK3 (ENSPPAG00000039668) #32	ENSPPAG00000043611	CCDC6 (ENSPPAG00000042978) #34	SLC16A9 (ENSPPAG00000030270) #36	ENSPPAG00000035776	FAM13C (ENSPPAG00000024865) #37
Chimpanzee	MODERN SPECIES	1	HERC4 (ENSPTRG00000002549) #10	SIRT1 (ENSPTRG00000002548) #11	ENSPTRG00000044940	DNAJC12 (ENSPTRG00000002546) #12	ENSPTRG00000046759	LRRTM3 (ENSPTRG00000002545) #14	CTNNA3 (ENSPTRG00000002544) #13	ENSPTRG00000051291	ENSPTRG00000047641 ##15	ENSPTRG00000044974	ENSPTRG00000043198	REEP3 (ENSPTRG00000002543) #18	ENSPTRG00000020568	JMJD1C (ENSPTRG00000002540) #19	NRBF2 (ENSPTRG00000002539) #21	EGR2 (ENSPTRG00000002538) #22	ADO (ENSPTRG00000040986) #23	ENSPTRG00000044896 #24	ZNF365 (ENSPTRG00000002537) #25	RTKN2 (ENSPTRG00000002536) #26	ARID5B (ENSPTRG00000002534) #27	CABCOCO1 (ENSPTRG00000002532) #28	TMEM26 (ENSPTRG00000002530) #29	RHOBTB1 (ENSPTRG00000002529) #30	CDK1 (ENSPTRG00000002528) #31	ENSPTRG00000052279 #33	ANK3 (ENSPTRG00000002526) #32	ENSPTRG00000041608	CCDC6 (ENSPTRG00000002524) #34	MRLN (ENSPTRG00000045653) #35	SLC16A9 (ENSPTRG00000002523) #36
Human	MODERN SPECIES	1	DNA2 (ENSG00000138346)	RUFY2 (ENSG00000204130)	HNRNPH3 (ENSG00000096746)	PBLD (ENSG00000108187) #7	ATOH7 (ENSG00000179774) #8	MYPN (ENSG00000138347) #9	HERC4 (ENSG00000148634) #10	SIRT1 (ENSG00000096717) #11	DNAJC12 (ENSG00000108176) #12	ENSG00000289325	LRRTM3 (ENSG00000198739) #14	CTNNA3 (ENSG00000183230) #13	REEP3 (ENSG00000165476) #18	JMJD1C (ENSG00000171988) #19	NRBF2 (ENSG00000148572) #21	EGR2 (ENSG00000122877) #22	ADO (ENSG00000181915) #23	ENSG00000285837	ZNF365 (ENSG00000138311) #25	RTKN2 (ENSG00000182010) #26	ARID5B (ENSG00000150347) #27	CABCOCO1 (ENSG00000183346) #28	TMEM26 (ENSG00000196932) #29	RHOBTB1 (ENSG00000072422) #30	CDK1 (ENSG00000170312) #31	ANK3 (ENSG00000151150) #32	CCDC6 (ENSG00000108091) #34	MRLN (ENSG00000227877) #35	SLC16A9 (ENSG00000165449) #36	FAM13C (ENSG00000148541) #37	PHYHIPL (ENSG00000165443)
Gibbon	MODERN SPECIES	8	SIRT1 (ENSNLEG00000012003) #11	ENSNLEG00000030601	DNAJC12 (ENSNLEG00000012018) #12	ENSNLEG00000012033	LRRTM3 (ENSNLEG00000012035) #14	CTNNA3 (ENSNLEG00000012042) #13	ENSNLEG00000035775	ENSNLEG00000027335 ##15	ENSNLEG00000018641	ENSNLEG00000031459 ##16	ENSNLEG00000028410	REEP3 (ENSNLEG00000027332) #18	ENSNLEG00000031005 #20	JMJD1C (ENSNLEG00000012049) #19	ENSNLEG00000028047 ##21	EGR2 (ENSNLEG00000027205) #22	ENSNLEG00000033805 #23	ENSNLEG00000030111 #24	ZNF365 (ENSNLEG00000012085) #25	RTKN2 (ENSNLEG00000012090) #26	ARID5B (ENSNLEG00000012110) #27	ENSNLEG00000012116 #28	TMEM26 (ENSNLEG00000029233) #29	RHOBTB1 (ENSNLEG00000012126) #30	CDK1 (ENSNLEG00000012138) #31	ENSNLEG00000012149	ANK3 (ENSNLEG00000012150) #32	CCDC6 (ENSNLEG00000027854) #34	SLC16A9 (ENSNLEG00000012249) #36	ENSNLEG00000032422	FAM13C (ENSNLEG00000012255) #37
Cercopithecidae	ANCESTRAL SPECIES	15	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000163824	ENSGT00940000159378 #12	ENSGT01030000234543.B.e.a ##13	ENSGT00940000164182.a.b	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00390000007547.g.b	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984.t.a #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00510000055172 #24	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00940000154185.l.a.b	ENSGT00950000183033.a.a.d #37
Cercopithecinae	ANCESTRAL SPECIES	15	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000163824	ENSGT00940000159378 #12	ENSGT01030000234543.B.e.a ##13	ENSGT00940000164182.a.b	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00390000007547.g.b	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984.t.a #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00510000055172 #24	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b.y.a #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00940000154185.l.a.b	ENSGT00950000183033.a.a.d #37
Cercopithecinae_a	ANCESTRAL SPECIES	14	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000163824	ENSGT00940000159378 #12	ENSGT00940000164182.a.b	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00390000004173.f	ENSGT00940000158794 #18	ENSGT00950000182810.B.a.x.b.b	ENSGT00940000158210 #19	ENSGT00390000000984.t.a #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00510000055172 #24	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b.y.a #31	ENSGT00940000154939 #32	ENSGT00950000182926.b.d.c.a.h.l.a	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00940000154185.l.a.b
Macaca	ANCESTRAL SPECIES	11	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00390000003682.ib.a.b.f.a.a.b.a.b.a.b.a.a	ENSGT00940000160543 #14	ENSGT00390000004173.f	ENSGT00940000158794 #18	ENSGT00950000182810.B.a.x.b.b	ENSGT00940000158210 #19	ENSGT00390000000984.t.a #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00510000055172 #24	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b.y.a #31	ENSGT00940000154939 #32	ENSGT00950000182926.b.d.c.a.h.l.a	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00940000154185.l.a.b
Macaca_a	ANCESTRAL SPECIES	13	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT01100000263509.a.a.b.b.a.b.b.b.a.a.a.a.b.a.b.a.a	ENSGT00390000003682.ib.a.b.f.a.a.b.a.b.a.b.a.a	ENSGT00940000160543 #14	ENSGT00390000004173.f	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984.t.a #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b.y.a #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00940000154185.l.a.b	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b
Crab-eating macaque	MODERN SPECIES	19	MYPN (ENSMFAG00000001619) #9	HERC4 (ENSMFAG00000041959) #10	SIRT1 (ENSMFAG00000046160) #11	DNAJC12 (ENSMFAG00000041356) #12	CTNNA3 (ENSMFAG00000036669) #13	ENSMFAG00000061015	ENSMFAG00000057791	ENSMFAG00000030655	LRRTM3 (ENSMFAG00000002037) #14	ENSMFAG00000059236	ENSMFAG00000052046	REEP3 (ENSMFAG00000030436) #18	JMJD1C (ENSMFAG00000000341) #19	ENSMFAG00000057998	NRBF2 (ENSMFAG00000031882) #21	EGR2 (ENSMFAG00000043070) #22	ADO (ENSMFAG00000013749) #23	ZNF365 (ENSMFAG00000044758) #25	ENSMFAG00000053361	RTKN2 (ENSMFAG00000039047) #26	ARID5B (ENSMFAG00000036687) #27	CABCOCO1 (ENSMFAG00000031452) #28	TMEM26 (ENSMFAG00000035704) #29	RHOBTB1 (ENSMFAG00000041306) #30	CDK1 (ENSMFAG00000039345) #31	ENSMFAG00000044498 #33	ENSMFAG00000047239 #32	ENSMFAG00000033458 #32	ENSMFAG00000063948	CCDC6 (ENSMFAG00000045197) #34	SLC16A9 (ENSMFAG00000032423) #36
Rhesus	MODERN SPECIES	19	MYPN (ENSMMUG00000006867) #9	HERC4 (ENSMMUG00000010105) #10	SIRT1 (ENSMMUG00000030531) #11	ENSMMUG00000061385	DNAJC12 (ENSMMUG00000055640) #12	CTNNA3 (ENSMMUG00000016902) #13	ENSMMUG00000056119	ENSMMUG00000053199	LRRTM3 (ENSMMUG00000018766) #14	ENSMMUG00000062976	ENSMMUG00000055397	ENSMMUG00000030530	REEP3 (ENSMMUG00000016850) #18	JMJD1C (ENSMMUG00000017727) #19	NRBF2 (ENSMMUG00000017726) #21	EGR2 (ENSMMUG00000010256) #22	ADO (ENSMMUG00000064442) #23	ZNF365 (ENSMMUG00000010254) #25	RTKN2 (ENSMMUG00000016829) #26	ARID5B (ENSMMUG00000000424) #27	CABCOCO1 (ENSMMUG00000013152) #28	TMEM26 (ENSMMUG00000014529) #29	ENSMMUG00000064130	ENSMMUG00000050056	RHOBTB1 (ENSMMUG00000021400) #30	CDK1 (ENSMMUG00000019876) #31	ANK3 (ENSMMUG00000003589) #32	ENSMMUG00000054340	CCDC6 (ENSMMUG00000018198) #34	MRLN (ENSMMUG00000042150) #35	SLC16A9 (ENSMMUG00000008911) #36
Pig-tailed macaque	MODERN SPECIES	353	ENSMNEG00000039648	DNAJC12 (ENSMNEG00000040820) #12	ENSMNEG00000032844	ENSMNEG00000041401	CTNNA3 (ENSMNEG00000040879) #13	ENSMNEG00000024182	LRRTM3 (ENSMNEG00000042510) #14	ENSMNEG00000036873	ENSMNEG00000003628	ENSMNEG00000036011	REEP3 (ENSMNEG00000033886) #18	JMJD1C (ENSMNEG00000029991) #19	ENSMNEG00000029188	ENSMNEG00000043648	NRBF2 (ENSMNEG00000025366) #21	EGR2 (ENSMNEG00000042085) #22	ADO (ENSMNEG00000028166) #23	ENSMNEG00000033048 #24	ZNF365 (ENSMNEG00000030489) #25	RTKN2 (ENSMNEG00000044923) #26	ARID5B (ENSMNEG00000041462) #27	CABCOCO1 (ENSMNEG00000031430) #28	TMEM26 (ENSMNEG00000038130) #29	RHOBTB1 (ENSMNEG00000042613) #30	CDK1 (ENSMNEG00000043947) #31	ANK3 (ENSMNEG00000034594) #32	ENSMNEG00000044750 #33	ENSMNEG00000029490	CCDC6 (ENSMNEG00000030697) #34	MRLN (ENSMNEG00000014934) #35	SLC16A9 (ENSMNEG00000029664) #36
Cercopithecinae_b	ANCESTRAL SPECIES	14	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000163824	ENSGT00940000159378 #12	ENSGT00940000164182.a.b	ENSGT00390000003682.ib.a.b.f.a.a.b.a.b.a.b.a.a	ENSGT00940000160543 #14	ENSGT01030000234543.B.f #13	ENSGT00390000004173.f	ENSGT00940000158794 #18	ENSGT00950000182810.B.a.x.b.b	ENSGT00940000158210 #19	ENSGT00940000165721	ENSGT00390000000984.t.a #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00510000055172 #24	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b.y.a #31	ENSGT00940000154939 #32	ENSGT00950000182926.b.d.c.a.h.l.a	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00940000154185.l.a.b
Cercopithecinae_d	ANCESTRAL SPECIES	143										ENSGT00390000004173.f	ENSGT00940000158794 #18	ENSGT00950000182810.B.a.x.b.b	ENSGT00940000158210 #19	ENSGT00940000165721	ENSGT00390000000984.t.b ##21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00510000055172 #24	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b.y.a #31	ENSGT00940000154939 #32	ENSGT00950000182926.b.d.c.a.h.l.a	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00940000154185.l.a.b
Drill	MODERN SPECIES	1425										ENSMLEG00000025256	REEP3 (ENSMLEG00000001096) #18	JMJD1C (ENSMLEG00000031563) #19	ENSMLEG00000034532	ENSMLEG00000034553	ENSMLEG00000034970 ##21	EGR2 (ENSMLEG00000036813) #22	ADO (ENSMLEG00000027376) #23	ENSMLEG00000037436 #24	ZNF365 (ENSMLEG00000007166) #25	ENSMLEG00000027614 #26
Sooty mangabey	MODERN SPECIES	595										ENSCATG00000017539	REEP3 (ENSCATG00000010425) #18	JMJD1C (ENSCATG00000040124) #19	ENSCATG00000033326	ENSCATG00000030709	ENSCATG00000033855 ##21	EGR2 (ENSCATG00000036150) #22	ADO (ENSCATG00000016498) #23	ENSCATG00000036398 #24	ZNF365 (ENSCATG00000030610) #25	RTKN2 (ENSCATG00000043432) #26	ARID5B (ENSCATG00000035614) #27	CABCOCO1 (ENSCATG00000014612) #28	TMEM26 (ENSCATG00000043914) #29	RHOBTB1 (ENSCATG00000042026) #30	ENSCATG00000038329 #31	ANK3 (ENSCATG00000039015) #32	ENSCATG00000045201	CCDC6 (ENSCATG00000033448) #34	SLC16A9 (ENSCATG00000013976) #36	ENSCATG00000034993	FAM13C (ENSCATG00000032373) #37
Olive baboon	MODERN SPECIES	2	SIRT1 (ENSPANG00000022077) #11	DNAJC12 (ENSPANG00000022078) #12	ENSPANG00000039119	LRRTM3 (ENSPANG00000022079) #14	CTNNA3 (ENSPANG00000022081) #13	ENSPANG00000038013	ENSPANG00000044789	ENSPANG00000047703	ENSPANG00000001307	ENSPANG00000050030	ENSPANG00000041261	REEP3 (ENSPANG00000022060) #18	JMJD1C (ENSPANG00000022061) #19	ENSPANG00000030466	NRBF2 (ENSPANG00000022063) #21	EGR2 (ENSPANG00000022064) #22	ADO (ENSPANG00000016238) #23	ZNF365 (ENSPANG00000022065) #25	RTKN2 (ENSPANG00000022066) #26	ARID5B (ENSPANG00000022067) #27	CABCOCO1 (ENSPANG00000022059) #28	TMEM26 (ENSPANG00000042705) #29	ENSPANG00000017636	RHOBTB1 (ENSPANG00000022029) #30	CDK1 (ENSPANG00000022031) #31	ANK3 (ENSPANG00000022032) #32	CCDC6 (ENSPANG00000022034) #34	MRLN (ENSPANG00000034452) #35	SLC16A9 (ENSPANG00000022036) #36	ENSPANG00000043863	FAM13C (ENSPANG00000022019) #37
Vervet Monkey	MODERN SPECIES	28	MYPN (ENSCSAG00000007529) #9	HERC4 (ENSCSAG00000007517) #10	SIRT1 (ENSCSAG00000007507) #11	ENSCSAG00000018433	DNAJC12 (ENSCSAG00000007500) #12	ENSCSAG00000007492 ##13	ENSCSAG00000007483 #13	LRRTM3 (ENSCSAG00000007477) #14	ENSCSAG00000007476 #13	ENSCSAG00000007470	ENSCSAG00000018434	REEP3 (ENSCSAG00000007459) #18	JMJD1C (ENSCSAG00000007455) #19	NRBF2 (ENSCSAG00000007449) #21	ENSCSAG00000018435	EGR2 (ENSCSAG00000007431) #22	ADO (ENSCSAG00000018436) #23	ZNF365 (ENSCSAG00000007426) #25	RTKN2 (ENSCSAG00000007420) #26	ARID5B (ENSCSAG00000007410) #27	CABCOCO1 (ENSCSAG00000007405) #28	TMEM26 (ENSCSAG00000007400) #29	RHOBTB1 (ENSCSAG00000007391) #30	ANK3 (ENSCSAG00000007379) #32	CCDC6 (ENSCSAG00000007353) #34	SLC16A9 (ENSCSAG00000007340) #36	ENSCSAG00000007333	FAM13C (ENSCSAG00000007323) #37	PHYHIPL (ENSCSAG00000007315)	BICC1 (ENSCSAG00000007305)	TFAM (ENSCSAG00000007291)
Rhinopithecus	ANCESTRAL SPECIES	252												ENSGT00390000007547.g.b	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984.t.b ##21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00510000055172 #24	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154546 #33	ENSGT00940000159083	ENSGT00950000182767.b.b.d.hb.b.a.b.a.a.b	ENSGT00850000133584	ENSGT00950000182767.b.b.d.hb.b.a.b.a.b	ENSGT00830000128380.q.a.a
Golden snub-nosed monkey	MODERN SPECIES	791												ENSRROG00000034393	REEP3 (ENSRROG00000006857) #18	JMJD1C (ENSRROG00000040982) #19	ENSRROG00000031923 ##21	EGR2 (ENSRROG00000042658) #22	ADO (ENSRROG00000014008) #23	ENSRROG00000043129 #24	ZNF365 (ENSRROG00000033582) #25	ENSRROG00000032571 #26
Black snub-nosed monkey	MODERN SPECIES	586					CCDC192 (ENSRBIG00000029179)	SLC12A2 (ENSRBIG00000041699)	FBN2 (ENSRBIG00000037592)	ENSRBIG00000000807	ENSRBIG00000028859	ENSRBIG00000042554	ENSRBIG00000039137 ##15	REEP3 (ENSRBIG00000040518) #18	JMJD1C (ENSRBIG00000023967) #19	ENSRBIG00000023798 ##21	ENSRBIG00000001190	EGR2 (ENSRBIG00000031709) #22	ADO (ENSRBIG00000027588) #23	ENSRBIG00000012841 #24	ZNF365 (ENSRBIG00000020873) #25	ENSRBIG00000043365 #26
Platyrrhini	ANCESTRAL SPECIES	14	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00940000154257.j #15	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984.s.a ##21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00510000055172 #24	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b.w.a #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b
Mas night monkey	MODERN SPECIES	858													REEP3 (ENSANAG00000035401) #18	JMJD1C (ENSANAG00000028311) #19	ENSANAG00000033272 ##21	EGR2 (ENSANAG00000030399) #22	ADO (ENSANAG00000012834) #23	ENSANAG00000032908 #24	ZNF365 (ENSANAG00000028023) #25	RTKN2 (ENSANAG00000035157) #26	ARID5B (ENSANAG00000027116) #27	NDUFA6 (ENSANAG00000035163)	CABCOCO1 (ENSANAG00000020679) #28	TMEM26 (ENSANAG00000020903) #29	RHOBTB1 (ENSANAG00000023793) #30	ENSANAG00000029200	ENSANAG00000024540 #31	ANK3 (ENSANAG00000033488) #32	CCDC6 (ENSANAG00000033859) #34	MRLN (ENSANAG00000018891) #35	ENSANAG00000034392 #36
Cebidae	ANCESTRAL SPECIES	17	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00940000154257.j #15	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984.s.a ##21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00510000055172 #24	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b.w.a #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b
Marmoset	MODERN SPECIES	3	MYPN (ENSCJAG00000019196) #9	HERC4 (ENSCJAG00000019252) #10	SIRT1 (ENSCJAG00000019318) #11	DNAJC12 (ENSCJAG00000019345) #12	ENSCJAG00000074615	CTNNA3 (ENSCJAG00000019354) #13	LRRTM3 (ENSCJAG00000019359) #14	ENSCJAG00000075808	ENSCJAG00000071549	REEP3 (ENSCJAG00000038962) #18	JMJD1C (ENSCJAG00000007163) #19	ENSCJAG00000081956	ENSCJAG00000074200	ENSCJAG00000067977	ENSCJAG00000043457 ##21	EGR2 (ENSCJAG00000062137) #22	ADO (ENSCJAG00000042988) #23	ZNF365 (ENSCJAG00000007112) #25	RTKN2 (ENSCJAG00000007086) #26	ARID5B (ENSCJAG00000051725) #27	CABCOCO1 (ENSCJAG00000007069) #28	TMEM26 (ENSCJAG00000007057) #29	ENSCJAG00000082605	RHOBTB1 (ENSCJAG00000007026) #30	ENSCJAG00000076738	CDK1 (ENSCJAG00000007001) #31	ENSCJAG00000021801	ANK3 (ENSCJAG00000006912) #32	MRLN (ENSCJAG00000006871) #34	ENSCJAG00000073157	SLC16A9 (ENSCJAG00000006862) #36
Cebidae_a	ANCESTRAL SPECIES	62	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00940000154257.j #15	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984.s.a.c ##21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00510000055172 #24	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b.w.a #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b
Capuchin	MODERN SPECIES	142																EGR2 (ENSCCAG00000033052) #22	ADO (ENSCCAG00000008005) #23	ENSCCAG00000035322	ENSCCAG00000034771 #24	ZNF365 (ENSCCAG00000027261) #25	RTKN2 (ENSCCAG00000031823) #26	ARID5B (ENSCCAG00000020892) #27	ENSCCAG00000019980	CABCOCO1 (ENSCCAG00000031664) #28	TMEM26 (ENSCCAG00000035340) #29	RHOBTB1 (ENSCCAG00000035096) #30	CDK1 (ENSCCAG00000028636) #31	ENSCCAG00000035085 #33	ANK3 (ENSCCAG00000032847) #32	ENSCCAG00000019706	CCDC6 (ENSCCAG00000023767) #34
Bolivian squirrel monkey	MODERN SPECIES	72	RUFY2 (ENSSBOG00000026822)	HNRNPH3 (ENSSBOG00000022722)	PBLD (ENSSBOG00000032895) #7	ATOH7 (ENSSBOG00000029750) #8	MYPN (ENSSBOG00000033391) #9	HERC4 (ENSSBOG00000025636) #10	SIRT1 (ENSSBOG00000034094) #11	ENSSBOG00000019127	DNAJC12 (ENSSBOG00000016625) #12	CTNNA3 (ENSSBOG00000029109) #13	LRRTM3 (ENSSBOG00000035483) #14	ENSSBOG00000021789 #15	REEP3 (ENSSBOG00000027338) #18	JMJD1C (ENSSBOG00000030112) #19	ENSSBOG00000028523 ##21	EGR2 (ENSSBOG00000024516) #22	ADO (ENSSBOG00000019132) #23	ENSSBOG00000022571 #24	ENSSBOG00000032292	ZNF365 (ENSSBOG00000031164) #25	RTKN2 (ENSSBOG00000030275) #26	ARID5B (ENSSBOG00000018993) #27	ENSSBOG00000027635	CABCOCO1 (ENSSBOG00000021773) #28	TMEM26 (ENSSBOG00000035881) #29	RHOBTB1 (ENSSBOG00000029546) #30	ENSSBOG00000027080 #31	ANK3 (ENSSBOG00000022186) #32	CCDC6 (ENSSBOG00000033288) #34	MRLN (ENSSBOG00000019699) #35	SLC16A9 (ENSSBOG00000035131) #36
Tarsier	MODERN SPECIES	6576																EGR2 (ENSTSYG00000030408) #22
Strepsirrhini	ANCESTRAL SPECIES	11	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.e.a ##13	ENSGT00940000160543 #14	ENSGT01030000234543.B.f #13	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00900000143228	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b
Lemuriformes	ANCESTRAL SPECIES	7	ENSGT00940000157520.i	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00900000143228	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b
Mouse lemur	MODERN SPECIES	6	ENSMICG00000037415	HNRNPH3 (ENSMICG00000007581)	PBLD (ENSMICG00000007573) #7	MYPN (ENSMICG00000007558) #9	HERC4 (ENSMICG00000007545) #10	SIRT1 (ENSMICG00000007538) #11	ENSMICG00000042864	DNAJC12 (ENSMICG00000007534) #12	LRRTM3 (ENSMICG00000033185) #14	ENSMICG00000030048	CTNNA3 (ENSMICG00000012553) #13	REEP3 (ENSMICG00000001292) #18	JMJD1C (ENSMICG00000008755) #19	NRBF2 (ENSMICG00000030033) #21	ENSMICG00000037215	EGR2 (ENSMICG00000032124) #22	ZNF365 (ENSMICG00000032413) #25	RTKN2 (ENSMICG00000032739) #26	ARID5B (ENSMICG00000035949) #27	CABCOCO1 (ENSMICG00000010856) #28	TMEM26 (ENSMICG00000047022) #29	ENSMICG00000030320	RHOBTB1 (ENSMICG00000028791) #30	ENSMICG00000027669	ENSMICG00000005793 #31	ANK3 (ENSMICG00000031195) #32	CCDC6 (ENSMICG00000031248) #34	SLC16A9 (ENSMICG00000037920) #36	FAM13C (ENSMICG00000001302) #37	PHYHIPL (ENSMICG00000001299)	BICC1 (ENSMICG00000002045)
Lemuriformes_a	ANCESTRAL SPECIES	350																ENSGT00940000158394 #22	ENSGT00390000014082.b #23
Greater bamboo lemur	MODERN SPECIES	1775																EGR2 (ENSPSMG00000015733) #22	ADO (ENSPSMG00000015720) #23
Coquerels sifaka	MODERN SPECIES	102												REEP3 (ENSPCOG00000022016) #18	JMJD1C (ENSPCOG00000015471) #19	NRBF2 (ENSPCOG00000018746) #21	ENSPCOG00000028808	EGR2 (ENSPCOG00000028814) #22	ENSPCOG00000016884	ENSPCOG00000021636	ZNF365 (ENSPCOG00000027268) #25	ENSPCOG00000024428	RTKN2 (ENSPCOG00000017209) #26	ARID5B (ENSPCOG00000010063) #27	CABCOCO1 (ENSPCOG00000026297) #28	TMEM26 (ENSPCOG00000017422) #29	RHOBTB1 (ENSPCOG00000019690) #30	CDK1 (ENSPCOG00000015538) #31	ANK3 (ENSPCOG00000019566) #32	CCDC6 (ENSPCOG00000021112) #34	MRLN (ENSPCOG00000013835) #35	SLC16A9 (ENSPCOG00000016426) #36	FAM13C (ENSPCOG00000018762) #37
Bushbaby	MODERN SPECIES	123	HNRNPH3 (ENSOGAG00000012493)	PBLD (ENSOGAG00000000982) #7	ATOH7 (ENSOGAG00000000980) #8	MYPN (ENSOGAG00000012002) #9	HERC4 (ENSOGAG00000012610) #10	SIRT1 (ENSOGAG00000012609) #11	DNAJC12 (ENSOGAG00000015733) #12	CTNNA3 (ENSOGAG00000003115) #13	LRRTM3 (ENSOGAG00000011031) #14	ENSOGAG00000032925	REEP3 (ENSOGAG00000014187) #18	ENSOGAG00000034707	JMJD1C (ENSOGAG00000014358) #19	ENSOGAG00000030740	NRBF2 (ENSOGAG00000005856) #21	EGR2 (ENSOGAG00000012939) #22	ADO (ENSOGAG00000012935) #23	ZNF365 (ENSOGAG00000010758) #25	ENSOGAG00000030088	RTKN2 (ENSOGAG00000015941) #26	ARID5B (ENSOGAG00000015939) #27	CABCOCO1 (ENSOGAG00000007348) #28	ENSOGAG00000026600	TMEM26 (ENSOGAG00000007346) #29	RHOBTB1 (ENSOGAG00000000636) #30	ENSOGAG00000009963 #31	ENSOGAG00000031968 #32	CCDC6 (ENSOGAG00000011350) #34	SLC16A9 (ENSOGAG00000007792) #36	FAM13C (ENSOGAG00000007787) #37	PHYHIPL (ENSOGAG00000024079)
Euarchontoglires_A	ANCESTRAL SPECIES	15	ENSGT00940000157520	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00940000170166	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00530000066649	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37
Tree shrew	MODERN SPECIES	4348																EGR2 (ENSTBEG00000010175) #22
Glires	ANCESTRAL SPECIES	16	ENSGT00940000157520	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00940000170166	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00530000066649	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37
Lagomorpha	ANCESTRAL SPECIES	18	ENSGT00940000157520	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00530000066649	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276
Pika	MODERN SPECIES	4356																EGR2 (ENSOPRG00000009799) #22	RTKN2 (ENSOPRG00000009778) #26	ENSOPRG00000009765 #28	ENSOPRG00000009752 #29
Rabbit	MODERN SPECIES	9	HNRNPH3 (ENSOCUG00000004443)	PBLD (ENSOCUG00000004441) #7	ATOH7 (ENSOCUG00000005978) #8	MYPN (ENSOCUG00000009939) #9	HERC4 (ENSOCUG00000009927) #10	SIRT1 (ENSOCUG00000009919) #11	DNAJC12 (ENSOCUG00000008694) #12	CTNNA3 (ENSOCUG00000038454) #13	LRRTM3 (ENSOCUG00000004014) #14	ENSOCUG00000039048	ENSOCUG00000037728	ENSOCUG00000030748	REEP3 (ENSOCUG00000016176) #18	JMJD1C (ENSOCUG00000006922) #19	NRBF2 (ENSOCUG00000006920) #21	EGR2 (ENSOCUG00000013672) #22	ADO (ENSOCUG00000013665) #23	ZNF365 (ENSOCUG00000017379) #25	RTKN2 (ENSOCUG00000001689) #26	ARID5B (ENSOCUG00000027029) #27	CABCOCO1 (ENSOCUG00000005919) #28	TMEM26 (ENSOCUG00000010987) #29	ENSOCUG00000029155	RHOBTB1 (ENSOCUG00000011533) #30	CDK1 (ENSOCUG00000002858) #31	ANK3 (ENSOCUG00000003521) #32	CCDC6 (ENSOCUG00000005508) #34	MRLN (ENSOCUG00000032475) #35	ENSOCUG00000015313	SLC16A9 (ENSOCUG00000013648) #36	FAM13C (ENSOCUG00000001543) #37
Rodentia	ANCESTRAL SPECIES	16	ENSGT00940000157520	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00940000170166	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b
Rodentia_A	ANCESTRAL SPECIES	15	ENSGT00940000157520	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT00940000160543 #14	ENSGT01030000234543.B.f #13	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00940000170166	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b
Sciuridae	ANCESTRAL SPECIES	30	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00940000153664.A.a.m.b	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00940000170166	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b
Marmotini	ANCESTRAL SPECIES	44	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378.a #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00940000153664.A.a.m.b	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00940000170166	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00970000193737.a	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37
Marmotini_b	ANCESTRAL SPECIES	171													ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984.m #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00940000170166	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00970000193737.a	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37
Arctic ground squirrel	MODERN SPECIES	125											ENSUPAG00010015285	REEP3 (ENSUPAG00010015265) #18	JMJD1C (ENSUPAG00010015120) #19	NRBF2 (ENSUPAG00010015104) #21	ENSUPAG00010015090	EGR2 (ENSUPAG00010015065) #22	ADO (ENSUPAG00010015059) #23	ZNF365 (ENSUPAG00010015047) #25	RTKN2 (ENSUPAG00010014989) #26	ARID5B (ENSUPAG00010014948) #27	CABCOCO1 (ENSUPAG00010014941) #28	ENSUPAG00010014935	TMEM26 (ENSUPAG00010014900) #29	RHOBTB1 (ENSUPAG00010014854) #30	CDK1 (ENSUPAG00010014842) #31	ENSUPAG00010004711 #32	CCDC6 (ENSUPAG00010004661) #34	ENSUPAG00010004654	MRLN (ENSUPAG00010004648) #35	SLC16A9 (ENSUPAG00010004633) #36
Squirrel	MODERN SPECIES	353												REEP3 (ENSSTOG00000011165) #18	JMJD1C (ENSSTOG00000013951) #19	ENSSTOG00000011341 #21	ENSSTOG00000020947	EGR2 (ENSSTOG00000004066) #22	ENSSTOG00000003597 #23
Alpin marmot	MODERN SPECIES	95													JMJD1C (ENSMMMG00000005576) #19	NRBF2 (ENSMMMG00000005568) #21	ENSMMMG00000005560	EGR2 (ENSMMMG00000005536) #22	ADO (ENSMMMG00000005533) #23	ENSMMMG00000005524	ZNF365 (ENSMMMG00000005510) #25	RTKN2 (ENSMMMG00000005449) #26	ARID5B (ENSMMMG00000005413) #27	CABCOCO1 (ENSMMMG00000005397) #28	ENSMMMG00000005379	TMEM26 (ENSMMMG00000005375) #29	RHOBTB1 (ENSMMMG00000005271) #30	CDK1 (ENSMMMG00000005249) #31	ENSMMMG00000002695 #32	CCDC6 (ENSMMMG00000002575) #34	ENSMMMG00000002558	MRLN (ENSMMMG00000002537) #35	SLC16A9 (ENSMMMG00000002517) #36
Eurasian red squirrel	MODERN SPECIES	13	ENSSVLG00005005373	DNAJC12 (ENSSVLG00005005405) #12	ENSSVLG00005005454	CTNNA3 (ENSSVLG00005005501) #13	ENSSVLG00005005585	LRRTM3 (ENSSVLG00005005616) #14	ENSSVLG00005005667	ENSSVLG00005005690	ENSSVLG00005005725 #18	ENSSVLG00005005777	ENSSVLG00005005802	JMJD1C (ENSSVLG00005005874) #19	ENSSVLG00005006066 #21	ENSSVLG00005006117 #21	ENSSVLG00005006184	EGR2 (ENSSVLG00005006204) #22	ADO (ENSSVLG00005006233) #23	ZNF365 (ENSSVLG00005006255) #25	RTKN2 (ENSSVLG00005006286) #26	ARID5B (ENSSVLG00005006398) #27	CABCOCO1 (ENSSVLG00005006506) #28	TMEM26 (ENSSVLG00005006538) #29	RHOBTB1 (ENSSVLG00005006604) #30	ENSSVLG00005006692 #31	ANK3 (ENSSVLG00005007064) #32	CCDC6 (ENSSVLG00005007703) #34	MRLN (ENSSVLG00005007781) #35	SLC16A9 (ENSSVLG00005007803) #36	FAM13C (ENSSVLG00005007929) #37	PHYHIPL (ENSSVLG00005008394)	BICC1 (ENSSVLG00005008456)
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT00940000157520	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT00940000160543 #14	ENSGT01030000234543.B.f #13	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001
Naked mole-rat female	MODERN SPECIES	4	ENSHGLG00000010600	ENSHGLG00000035976 #12	ENSHGLG00000014093 #13	ENSHGLG00000038381	LRRTM3 (ENSHGLG00000016164) #14	ENSHGLG00000043450	ENSHGLG00000046411	ENSHGLG00000001073	ENSHGLG00000019840	ENSHGLG00000036468	ENSHGLG00000002565 #18	JMJD1C (ENSHGLG00000003439) #19	ENSHGLG00000009176	NRBF2 (ENSHGLG00000006705) #21	ENSHGLG00000043030	EGR2 (ENSHGLG00000007402) #22	ADO (ENSHGLG00000046934) #23	ZNF365 (ENSHGLG00000044328) #25	ENSHGLG00000014362	ENSHGLG00000043847	ENSHGLG00000033477	DDX21 (ENSHGLG00000038462)	DDX50 (ENSHGLG00000013466)	STOX1 (ENSHGLG00000013313)	ENSHGLG00000037043	CCAR1 (ENSHGLG00000012835)	ENSHGLG00000036289	SLC25A16 (ENSHGLG00000034726)	DNA2 (ENSHGLG00000012094)	RUFY2 (ENSHGLG00000011743)	HNRNPH3 (ENSHGLG00000011321)
Hystricomorpha_a	ANCESTRAL SPECIES	3	ENSGT00940000157520	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT00940000160543 #14	ENSGT01030000234543.B.f #13	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001
Guinea pig	MODERN SPECIES	15	TET1 (ENSCPOG00000009306)	SLC25A16 (ENSCPOG00000009009)	DNA2 (ENSCPOG00000026598)	RUFY2 (ENSCPOG00000006401)	HNRNPH3 (ENSCPOG00000006397)	PBLD (ENSCPOG00000019806) #7	MYPN (ENSCPOG00000007881) #9	HERC4 (ENSCPOG00000007874) #10	SIRT1 (ENSCPOG00000000863) #11	DNAJC12 (ENSCPOG00000037061) #12	LRRTM3 (ENSCPOG00000005794) #14	CTNNA3 (ENSCPOG00000013332) #13	REEP3 (ENSCPOG00000037697) #18	JMJD1C (ENSCPOG00000014182) #19	NRBF2 (ENSCPOG00000031723) #21	EGR2 (ENSCPOG00000037511) #22	ADO (ENSCPOG00000007543) #23	ZNF365 (ENSCPOG00000007536) #25	RTKN2 (ENSCPOG00000003692) #26	ARID5B (ENSCPOG00000036017) #27	CABCOCO1 (ENSCPOG00000011235) #28	TMEM26 (ENSCPOG00000039231) #29	RHOBTB1 (ENSCPOG00000004867) #30	ENSCPOG00000005402 #31	ENSCPOG00000032292 #32	CCDC6 (ENSCPOG00000013674) #34	SLC16A9 (ENSCPOG00000000319) #36	FAM13C (ENSCPOG00000004183) #37	PHYHIPL (ENSCPOG00000030387)	BICC1 (ENSCPOG00000015585)	ENSCPOG00000024430
Hystricomorpha_b	ANCESTRAL SPECIES	72	ENSGT00940000157520	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT00940000160543 #14	ENSGT01030000234543.B.f #13	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001
Degu	MODERN SPECIES	87	ENSODEG00000004211	HNRNPH3 (ENSODEG00000004517)	PBLD (ENSODEG00000004402) #7	ATOH7 (ENSODEG00000004225) #8	MYPN (ENSODEG00000008662) #9	HERC4 (ENSODEG00000008527) #10	SIRT1 (ENSODEG00000005951) #11	ENSODEG00000019249	ENSODEG00000005484 #14	CTNNA3 (ENSODEG00000005148) #13	ENSODEG00000005042	ENSODEG00000019144	REEP3 (ENSODEG00000004708) #18	JMJD1C (ENSODEG00000004131) #19	NRBF2 (ENSODEG00000004485) #21	ENSODEG00000004415 #22	ADO (ENSODEG00000004378) #23	ENSODEG00000004333	ZNF365 (ENSODEG00000004279) #25	ENSODEG00000004053	RTKN2 (ENSODEG00000006218) #26	ARID5B (ENSODEG00000006194) #27	CABCOCO1 (ENSODEG00000006135) #28	TMEM26 (ENSODEG00000006121) #29
Long-tailed chinchilla	MODERN SPECIES	132	HNRNPH3 (ENSCLAG00000010680)	PBLD (ENSCLAG00000010284) #7	ENSCLAG00000014026	MYPN (ENSCLAG00000011004) #9	HERC4 (ENSCLAG00000016138) #10	SIRT1 (ENSCLAG00000015502) #11	DNAJC12 (ENSCLAG00000012847) #12	LRRTM3 (ENSCLAG00000011661) #14	CTNNA3 (ENSCLAG00000010308) #13	ENSCLAG00000009474	ENSCLAG00000012770	REEP3 (ENSCLAG00000012622) #18	JMJD1C (ENSCLAG00000012242) #19	NRBF2 (ENSCLAG00000011072) #21	ENSCLAG00000010415	EGR2 (ENSCLAG00000009233) #22	ADO (ENSCLAG00000010337) #23	ZNF365 (ENSCLAG00000010746) #25	RTKN2 (ENSCLAG00000009049) #26	ARID5B (ENSCLAG00000011482) #27	CABCOCO1 (ENSCLAG00000008950) #28	TMEM26 (ENSCLAG00000008641) #29	RHOBTB1 (ENSCLAG00000011495) #30	CDK1 (ENSCLAG00000011893) #31	ENSCLAG00000017378 #32	CCDC6 (ENSCLAG00000014665) #34	SLC16A9 (ENSCLAG00000012240) #36	FAM13C (ENSCLAG00000014713) #37	PHYHIPL (ENSCLAG00000015004)	BICC1 (ENSCLAG00000012171)	TFAM (ENSCLAG00000009976)
Rodentia_B	ANCESTRAL SPECIES	10	ENSGT00940000157520	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000166179	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b
Myomorpha	ANCESTRAL SPECIES	15	ENSGT00940000157520	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000166179	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b
Muroidea	ANCESTRAL SPECIES	43	ENSGT00940000157520	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000166179	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b
Muroidea_A	ANCESTRAL SPECIES	8	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595.f #7	ENSGT00390000017595.e #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276
Cricetidae	ANCESTRAL SPECIES	9	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595.f #7	ENSGT00390000017595.e #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT00940000160543 #14	ENSGT01030000234543.B.f #13	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276
Cricetinae	ANCESTRAL SPECIES	24	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595.f #7	ENSGT00390000017595.e #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT00940000160543 #14	ENSGT01030000234543.B.f #13	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001
Chinese hamster chok1gshd	MODERN SPECIES	204	Hnrnph3 (ENSCGRG00001024086)	Pbld2 (ENSCGRG00001016015) #7	Pbld1 (ENSCGRG00001010588) #7	Atoh7 (ENSCGRG00001006675) #8	Mypn (ENSCGRG00001014629) #9	Herc4 (ENSCGRG00001010810) #10	ENSCGRG00001012849	Dnajc12 (ENSCGRG00001020672) #12	ENSCGRG00001000783	ENSCGRG00001016512	Lrrtm3 (ENSCGRG00001012358) #14	Ctnna3 (ENSCGRG00001020160) #13	Reep3 (ENSCGRG00001011820) #18	Jmjd1c (ENSCGRG00001020069) #19	ENSCGRG00001023215 #21	Egr2 (ENSCGRG00001022717) #22	Ado (ENSCGRG00001001280) #23	Zfp365 (ENSCGRG00001011833) #25	Rtkn2 (ENSCGRG00001009265) #26	Arid5b (ENSCGRG00001019926) #27	Cabcoco1 (ENSCGRG00001012038) #28	Tmem26 (ENSCGRG00001013514) #29	Rhobtb1 (ENSCGRG00001024396) #30	Cdk1 (ENSCGRG00001019727) #31	ENSCGRG00001012186 #32	Ccdc6 (ENSCGRG00001018896) #34	Slc16a9 (ENSCGRG00001024424) #36	Fam13c (ENSCGRG00001012101) #37	Phyhipl (ENSCGRG00001024883)	ENSCGRG00001017942	Bicc1 (ENSCGRG00001019138)
Golden Hamster	MODERN SPECIES	641	Hnrnph3 (ENSMAUG00000022233)	Pbld2 (ENSMAUG00000022266) #7	Pbld1 (ENSMAUG00000022220) #7	Atoh7 (ENSMAUG00000010517) #8	Mypn (ENSMAUG00000021985) #9	Herc4 (ENSMAUG00000009776) #10	Sirt1 (ENSMAUG00000008395) #11	Dnajc12 (ENSMAUG00000021444) #12	ENSMAUG00000021196	Lrrtm3 (ENSMAUG00000021553) #14	Ctnna3 (ENSMAUG00000012953) #13	ENSMAUG00000021521	Reep3 (ENSMAUG00000021449) #18	ENSMAUG00000002201 #19	Nrbf2 (ENSMAUG00000021159) #21	Egr2 (ENSMAUG00000021143) #22	Zfp365 (ENSMAUG00000020138) #25	Rtkn2 (ENSMAUG00000003167) #26	Arid5b (ENSMAUG00000009016) #27	Cabcoco1 (ENSMAUG00000021961) #28	Tmem26 (ENSMAUG00000021815) #29	Rhobtb1 (ENSMAUG00000021113) #30	Cdk1 (ENSMAUG00000020301) #31	ENSMAUG00000014771 #32	Ccdc6 (ENSMAUG00000005713) #34	ENSMAUG00000021326 #36	Fam13c (ENSMAUG00000021595) #37	Phyhipl (ENSMAUG00000017391)	Bicc1 (ENSMAUG00000018772)	Ube2d1 (ENSMAUG00000022226)	Cisd1 (ENSMAUG00000018518)
Cricetidae_B	ANCESTRAL SPECIES	12	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595.f #7	ENSGT00390000017595.e #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276
Prairie vole	MODERN SPECIES	352	Hnrnph3 (ENSMOCG00000008138)	Pbld2 (ENSMOCG00000022511) #7	Pbld1 (ENSMOCG00000003815) #7	Atoh7 (ENSMOCG00000007503) #8	ENSMOCG00000004364	Mypn (ENSMOCG00000023015) #9	ENSMOCG00000018165	Herc4 (ENSMOCG00000016992) #10	Sirt1 (ENSMOCG00000020561) #11	Dnajc12 (ENSMOCG00000022666) #12	Ctnna3 (ENSMOCG00000008017) #13	Lrrtm3 (ENSMOCG00000001345) #14	Reep3 (ENSMOCG00000015776) #18	Jmjd1c (ENSMOCG00000003347) #19	Nrbf2 (ENSMOCG00000004504) #21	Egr2 (ENSMOCG00000009098) #22	Ado (ENSMOCG00000003710) #23	Zfp365 (ENSMOCG00000010557) #25	Rtkn2 (ENSMOCG00000017986) #26	Arid5b (ENSMOCG00000021546) #27	Cabcoco1 (ENSMOCG00000022800) #28	Tmem26 (ENSMOCG00000017064) #29	ENSMOCG00000019496 #30	ENSMOCG00000020164	Cdk1 (ENSMOCG00000021938) #31	ENSMOCG00000022981 #32	Ccdc6 (ENSMOCG00000003461) #34	Slc16a9 (ENSMOCG00000012040) #36	Fam13c (ENSMOCG00000013312) #37	Phyhipl (ENSMOCG00000016827)	Bicc1 (ENSMOCG00000020143)
Northern American deer mouse	MODERN SPECIES	13	Dna2 (ENSPEMG00000014458)	Rufy2 (ENSPEMG00000020397)	Hnrnph3 (ENSPEMG00000017748)	Pbld2 (ENSPEMG00000024713) #7	Pbld1 (ENSPEMG00000025298) #7	Atoh7 (ENSPEMG00000008766) #8	Mypn (ENSPEMG00000013816) #9	Herc4 (ENSPEMG00000000180) #10	ENSPEMG00000029989 #11	Dnajc12 (ENSPEMG00000017935) #12	Lrrtm3 (ENSPEMG00000000088) #14	Ctnna3 (ENSPEMG00000017162) #13	Reep3 (ENSPEMG00000018566) #18	Jmjd1c (ENSPEMG00000004434) #19	ENSPEMG00000029503 #21	Egr2 (ENSPEMG00000026453) #22	Ado (ENSPEMG00000014385) #23	Zfp365 (ENSPEMG00000025006) #25	Rtkn2 (ENSPEMG00000015347) #26	Arid5b (ENSPEMG00000026514) #27	Cabcoco1 (ENSPEMG00000021839) #28	Tmem26 (ENSPEMG00000021587) #29	Rhobtb1 (ENSPEMG00000022032) #30	Cdk1 (ENSPEMG00000021735) #31	ENSPEMG00000022019 #32	Ccdc6 (ENSPEMG00000014463) #34	Mrln (ENSPEMG00000028945) #35	Slc16a9 (ENSPEMG00000021460) #36	ENSPEMG00000022127 #37	Phyhipl (ENSPEMG00000028955)	Bicc1 (ENSPEMG00000014055)
Murinae	ANCESTRAL SPECIES	18	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595.f #7	ENSGT00390000017595.e #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276
Mus	ANCESTRAL SPECIES	15	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595.f #7	ENSGT00390000017595.e #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00860000135730	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b
Mus_A	ANCESTRAL SPECIES	11	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595.f #7	ENSGT00390000017595.e #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00860000136009	ENSGT00940000160543 #14	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00960000190901	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00860000135730	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37
Mus_B	ANCESTRAL SPECIES	10	ENSGT00940000157720	ENSGT00390000017595.f #7	ENSGT00390000017595.e #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT00940000155481.q.a	ENSGT01030000234543.B.f #13	ENSGT00860000136009	ENSGT00940000160543 #14	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00960000190901	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00860000135730	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37
Mouse	MODERN SPECIES	1	Rufy2 (ENSMUSG00000020070)	Hnrnph3 (ENSMUSG00000020069)	Pbld2 (ENSMUSG00000020072) #7	Pbld1 (ENSMUSG00000112129) #7	Atoh7 (ENSMUSG00000036816) #8	Mypn (ENSMUSG00000020067) #9	Herc4 (ENSMUSG00000020064) #10	Sirt1 (ENSMUSG00000020063) #11	Dnajc12 (ENSMUSG00000036764) #12	Rnf7l (ENSMUSG00000048185)	Ctnna3 (ENSMUSG00000060843) #13	Lrrtm3 (ENSMUSG00000042846) #14	Reep3 (ENSMUSG00000019873) #18	Jmjd1c (ENSMUSG00000037876) #19	Nrbf2 (ENSMUSG00000075000) #21	Egr2 (ENSMUSG00000037868) #22	Ado (ENSMUSG00000057134) #23	Zfp365 (ENSMUSG00000037855) #25	Rtkn2 (ENSMUSG00000037846) #26	Arid5b (ENSMUSG00000019947) #27	Cabcoco1 (ENSMUSG00000019945) #28	Tmem26 (ENSMUSG00000060044) #29	Rhobtb1 (ENSMUSG00000019944) #30	Cdk1 (ENSMUSG00000019942) #31	Ank3 (ENSMUSG00000069601) #32	Ccdc6 (ENSMUSG00000048701) #34	Mrln (ENSMUSG00000019933) #35	Slc16a9 (ENSMUSG00000037762) #36	Fam13c (ENSMUSG00000043259) #37	Phyhipl (ENSMUSG00000037747)	Bicc1 (ENSMUSG00000014329)
Mus_C	ANCESTRAL SPECIES	7	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595.f #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT00940000155481.q.a	ENSGT01030000234543.B.f #13	ENSGT00860000136009	ENSGT00940000160543 #14	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00960000190901	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00860000135730	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01030000235256 #35	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37
spretus	MODERN SPECIES	1	Dna2 (MGP_SPRETEiJ_G0016205)	Rufy2 (MGP_SPRETEiJ_G0016206)	Hnrnph3 (MGP_SPRETEiJ_G0016207)	Atoh7 (MGP_SPRETEiJ_G0016209) #8	Mypn (MGP_SPRETEiJ_G0016210) #9	Herc4 (MGP_SPRETEiJ_G0016211) #10	Sirt1 (MGP_SPRETEiJ_G0016212) #11	Dnajc12 (MGP_SPRETEiJ_G0016213) #12	Rnf7l (MGP_SPRETEiJ_G0016214)	Ctnna3 (MGP_SPRETEiJ_G0016215) #13	MGP_SPRETEiJ_G0016216	Lrrtm3 (MGP_SPRETEiJ_G0016217) #14	Reep3 (MGP_SPRETEiJ_G0016218) #18	Jmjd1c (MGP_SPRETEiJ_G0016219) #19	Nrbf2 (MGP_SPRETEiJ_G0016220) #21	Egr2 (MGP_SPRETEiJ_G0016221) #22	Ado (MGP_SPRETEiJ_G0016222) #23	MGP_SPRETEiJ_G0016223	Zfp365 (MGP_SPRETEiJ_G0016224) #25	Rtkn2 (MGP_SPRETEiJ_G0016225) #26	Arid5b (MGP_SPRETEiJ_G0016226) #27	Cabcoco1 (MGP_SPRETEiJ_G0016227) #28	Tmem26 (MGP_SPRETEiJ_G0016228) #29	Rhobtb1 (MGP_SPRETEiJ_G0016229) #30	MGP_SPRETEiJ_G0016230	Cdk1 (MGP_SPRETEiJ_G0016231) #31	Ank3 (MGP_SPRETEiJ_G0016232) #32	MGP_SPRETEiJ_G0016233 #34	Slc16a9 (MGP_SPRETEiJ_G0016234) #36	Fam13c (MGP_SPRETEiJ_G0016235) #37	Phyhipl (MGP_SPRETEiJ_G0016236)
Steppe mouse	MODERN SPECIES	3426										ENSMSIG00000030429	ENSMSIG00000030424	ENSMSIG00000030423	Reep3 (ENSMSIG00000030416) #18	Jmjd1c (ENSMSIG00000030391) #19	Nrbf2 (ENSMSIG00000030387) #21	Egr2 (ENSMSIG00000030384) #22	Ado (ENSMSIG00000030383) #23	ENSMSIG00000030381	Zfp365 (ENSMSIG00000030373) #25	Rtkn2 (ENSMSIG00000030367) #26	ENSMSIG00000030364	Arid5b (ENSMSIG00000030362) #27	Cabcoco1 (ENSMSIG00000030358) #28	Tmem26 (ENSMSIG00000030355) #29	ENSMSIG00000030348	Rhobtb1 (ENSMSIG00000030344) #30	ENSMSIG00000030338 #31	ENSMSIG00000028711 #32	ENSMSIG00000028640 #34	ENSMSIG00000028634 #35	Slc16a9 (ENSMSIG00000028631) #36
Ryukyu mouse	MODERN SPECIES	1	Dna2 (MGP_CAROLIEiJ_G0015394)	Rufy2 (MGP_CAROLIEiJ_G0015395)	Hnrnph3 (MGP_CAROLIEiJ_G0015396)	Pbld1 (MGP_CAROLIEiJ_G0015397) #7	Atoh7 (MGP_CAROLIEiJ_G0015398) #8	Mypn (MGP_CAROLIEiJ_G0015399) #9	Herc4 (MGP_CAROLIEiJ_G0015400) #10	Sirt1 (MGP_CAROLIEiJ_G0015401) #11	Dnajc12 (MGP_CAROLIEiJ_G0015402) #12	Ctnna3 (MGP_CAROLIEiJ_G0015403) #13	MGP_CAROLIEiJ_G0015404	Lrrtm3 (MGP_CAROLIEiJ_G0015405) #14	Reep3 (MGP_CAROLIEiJ_G0015406) #18	Jmjd1c (MGP_CAROLIEiJ_G0015407) #19	Nrbf2 (MGP_CAROLIEiJ_G0015408) #21	Egr2 (MGP_CAROLIEiJ_G0015409) #22	Ado (MGP_CAROLIEiJ_G0015410) #23	MGP_CAROLIEiJ_G0015411	Zfp365 (MGP_CAROLIEiJ_G0015412) #25	Rtkn2 (MGP_CAROLIEiJ_G0015413) #26	Arid5b (MGP_CAROLIEiJ_G0015414) #27	Cabcoco1 (MGP_CAROLIEiJ_G0015415) #28	Tmem26 (MGP_CAROLIEiJ_G0015416) #29	Rhobtb1 (MGP_CAROLIEiJ_G0015417) #30	MGP_CAROLIEiJ_G0015418	Cdk1 (MGP_CAROLIEiJ_G0015419) #31	Ank3 (MGP_CAROLIEiJ_G0015420) #32	Ccdc6 (MGP_CAROLIEiJ_G0015421) #34	Slc16a9 (MGP_CAROLIEiJ_G0015422) #36	Fam13c (MGP_CAROLIEiJ_G0015423) #37	Phyhipl (MGP_CAROLIEiJ_G0015424)
Shrew mouse	MODERN SPECIES	22	Dna2 (MGP_PahariEiJ_G0030810)	Rufy2 (MGP_PahariEiJ_G0030811)	Hnrnph3 (MGP_PahariEiJ_G0030812)	Pbld2 (MGP_PahariEiJ_G0030813) #7	Atoh7 (MGP_PahariEiJ_G0030814) #8	Mypn (MGP_PahariEiJ_G0030815) #9	Herc4 (MGP_PahariEiJ_G0030816) #10	Sirt1 (MGP_PahariEiJ_G0030817) #11	Dnajc12 (MGP_PahariEiJ_G0030818) #12	Ctnna3 (MGP_PahariEiJ_G0030819) #13	MGP_PahariEiJ_G0030820	Lrrtm3 (MGP_PahariEiJ_G0030821) #14	MGP_PahariEiJ_G0030822	Jmjd1c (MGP_PahariEiJ_G0030823) #19	Nrbf2 (MGP_PahariEiJ_G0030824) #21	Egr2 (MGP_PahariEiJ_G0030825) #22	Ado (MGP_PahariEiJ_G0030826) #23	MGP_PahariEiJ_G0030827	Zfp365 (MGP_PahariEiJ_G0030828) #25	Rtkn2 (MGP_PahariEiJ_G0030829) #26	Arid5b (MGP_PahariEiJ_G0030830) #27	Cabcoco1 (MGP_PahariEiJ_G0030831) #28	Tmem26 (MGP_PahariEiJ_G0030832) #29	Rhobtb1 (MGP_PahariEiJ_G0030833) #30	MGP_PahariEiJ_G0030834	Cdk1 (MGP_PahariEiJ_G0030835) #31	Ank3 (MGP_PahariEiJ_G0030836) #32	Ccdc6 (MGP_PahariEiJ_G0030837) #34	Slc16a9 (MGP_PahariEiJ_G0030838) #36	Fam13c (MGP_PahariEiJ_G0030839) #37	Phyhipl (MGP_PahariEiJ_G0030840)
Rat	MODERN SPECIES	12	Herc4 (ENSRNOG00000061040) #10	Sirt1 (ENSRNOG00000051592) #11	Dnajc12 (ENSRNOG00000051960) #12	ENSRNOG00000066776	LOC108349010 (ENSRNOG00000000376)	ENSRNOG00000069858	Lrrtm3 (ENSRNOG00000026466) #14	Ctnna3 (ENSRNOG00000000373) #13	ENSRNOG00000070306	ENSRNOG00000070329	Rpl36al-ps5 (ENSRNOG00000032408)	Dnal4-ps1 (ENSRNOG00000067902)	Reep3 (ENSRNOG00000000645) #18	Jmjd1c (ENSRNOG00000000648) #19	Nrbf2 (ENSRNOG00000000641) #21	Egr2 (ENSRNOG00000000640) #22	Ado (ENSRNOG00000070733) #23	Zfp365 (ENSRNOG00000000638) #25	Rtkn2 (ENSRNOG00000067849) #26	Rtkn2 (ENSRNOG00000000636) #26	Arid5b (ENSRNOG00000000635) #27	Cabcoco1 (ENSRNOG00000000634) #28	Tmem26 (ENSRNOG00000027859) #29	Rhobtb1 (ENSRNOG00000000633) #30	Cdk1 (ENSRNOG00000000632) #31	Dynlt2b-ps1 (ENSRNOG00000000630)	Ank3 (ENSRNOG00000053288) #32	Ccdc6 (ENSRNOG00000024019) #34	Mrln (ENSRNOG00000069916) #35	Slc16a9 (ENSRNOG00000049063) #36	Fam13c (ENSRNOG00000000275) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	983														Jmjd1c (ENSNGAG00000020687) #19	Nrbf2 (ENSNGAG00000017450) #21	Egr2 (ENSNGAG00000020753) #22	Ado (ENSNGAG00000007808) #23	Zfp365 (ENSNGAG00000020514) #25	Rtkn2 (ENSNGAG00000014123) #26	Arid5b (ENSNGAG00000016623) #27	Cabcoco1 (ENSNGAG00000009888) #28	Tmem26 (ENSNGAG00000020384) #29	ENSNGAG00000020082	ENSNGAG00000019772 #30
Lesser Egyptian jerboa	MODERN SPECIES	64	Dna2 (ENSJJAG00000021501)	ENSJJAG00000022466	ENSJJAG00000022736	ENSJJAG00000018983 #7	Atoh7 (ENSJJAG00000014782) #8	Mypn (ENSJJAG00000007229) #9	Herc4 (ENSJJAG00000016624) #10	Sirt1 (ENSJJAG00000021678) #11	ENSJJAG00000011610 #12	Lrrtm3 (ENSJJAG00000017094) #14	Ctnna3 (ENSJJAG00000018409) #13	Reep3 (ENSJJAG00000017116) #18	ENSJJAG00000004728	Jmjd1c (ENSJJAG00000023295) #19	Nrbf2 (ENSJJAG00000000936) #21	ENSJJAG00000021676 #22	Zfp365 (ENSJJAG00000019674) #25	Rtkn2 (ENSJJAG00000019121) #26	Arid5b (ENSJJAG00000001974) #27	Cabcoco1 (ENSJJAG00000023473) #28	Tmem26 (ENSJJAG00000010064) #29	ENSJJAG00000018107	ENSJJAG00000018248 #30	ENSJJAG00000015480 #31	ENSJJAG00000017885 #32	ENSJJAG00000016045 #32	Ccdc6 (ENSJJAG00000000385) #34	Slc16a9 (ENSJJAG00000014368) #36	Fam13c (ENSJJAG00000008287) #37	ENSJJAG00000010047	Phyhipl (ENSJJAG00000000776)
Kangaroo rat	MODERN SPECIES	353	Dna2 (ENSDORG00000008959)	ENSDORG00000011475	Hnrnph3 (ENSDORG00000011470)	ENSDORG00000015811 #7	ENSDORG00000026237 #7	Mypn (ENSDORG00000016435) #9	Herc4 (ENSDORG00000005214) #10	Sirt1 (ENSDORG00000005213) #11	Dnajc12 (ENSDORG00000025373) #12	Lrrtm3 (ENSDORG00000007563) #14	Ctnna3 (ENSDORG00000009638) #13	ENSDORG00000027118	Reep3 (ENSDORG00000006066) #18	Jmjd1c (ENSDORG00000013963) #19	Nrbf2 (ENSDORG00000013962) #21	ENSDORG00000027652 #22	Ado (ENSDORG00000002221) #23	Zfp365 (ENSDORG00000024597) #25	ENSDORG00000014351 #26	Arid5b (ENSDORG00000028134) #27	Cabcoco1 (ENSDORG00000013475) #28	Tmem26 (ENSDORG00000011158) #29	ENSDORG00000027083	ENSDORG00000016300 #30	ENSDORG00000016299 #31	ENSDORG00000024201	ENSDORG00000025134	ENSDORG00000003517 #32	Ccdc6 (ENSDORG00000004897) #34	Slc16a9 (ENSDORG00000025300) #36	Fam13c (ENSDORG00000023161) #37
Laurasiatheria	ANCESTRAL SPECIES	14	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.e.a ##13	ENSGT00940000160543 #14	ENSGT01030000234543.B.f #13	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00900000143228	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000158394 #22
Hedgehog	MODERN SPECIES	16162																EGR2 (ENSEEUG00000002796) #22
Laurasiatheria_a	ANCESTRAL SPECIES	15	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.e.a ##13	ENSGT00940000160543 #14	ENSGT01030000234543.B.f #13	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00900000143228	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276
Artiodactyla	ANCESTRAL SPECIES	14	ENSGT00940000157520	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT00940000160543 #14	ENSGT01030000234543.B.f #13	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01100000264001	ENSGT00940000156416 #36	ENSGT00900000143228	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b
Suina	ANCESTRAL SPECIES	6	ENSGT00940000157520	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT00940000160543 #14	ENSGT01030000234543.B.f #13	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01100000264001	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276
Chacoan peccary	MODERN SPECIES	975	HNRNPH3 (ENSCWAG00000021685)	PBLD (ENSCWAG00000021690) #7	ATOH7 (ENSCWAG00000021693) #8	MYPN (ENSCWAG00000021701) #9	HERC4 (ENSCWAG00000021739) #10	ENSCWAG00000021788	SIRT1 (ENSCWAG00000021793) #11	DNAJC12 (ENSCWAG00000021803) #12	ENSCWAG00000021810	CTNNA3 (ENSCWAG00000021814) #13	LRRTM3 (ENSCWAG00000021821) #14	REEP3 (ENSCWAG00000021826) #18	JMJD1C (ENSCWAG00000021837) #19	NRBF2 (ENSCWAG00000021848) #21	ENSCWAG00000021851	EGR2 (ENSCWAG00000021854) #22	ADO (ENSCWAG00000021855) #23	ZNF365 (ENSCWAG00000021859) #25	RTKN2 (ENSCWAG00000021863) #26	ARID5B (ENSCWAG00000021870) #27	CABCOCO1 (ENSCWAG00000021876) #28	TMEM26 (ENSCWAG00000021881) #29	RHOBTB1 (ENSCWAG00000021883) #30	CDK1 (ENSCWAG00000021886) #31	ANK3 (ENSCWAG00000021905) #32	CCDC6 (ENSCWAG00000021927) #34	ENSCWAG00000021928	SLC16A9 (ENSCWAG00000021929) #36	FAM13C (ENSCWAG00000021931) #37	PHYHIPL (ENSCWAG00000021934)	BICC1 (ENSCWAG00000021937)
Pig	MODERN SPECIES	5	HNRNPH3 (ENSSSCG00000010238)	PBLD (ENSSSCG00000025876) #7	ENSSSCG00000049861	ATOH7 (ENSSSCG00000021995) #8	MYPN (ENSSSCG00000029311) #9	HERC4 (ENSSSCG00000038913) #10	SIRT1 (ENSSSCG00000010235) #11	ENSSSCG00000010234	DNAJC12 (ENSSSCG00000035600) #12	ENSSSCG00000048396	LRRTM3 (ENSSSCG00000010232) #14	CTNNA3 (ENSSSCG00000036480) #13	REEP3 (ENSSSCG00000036476) #18	JMJD1C (ENSSSCG00000010226) #19	NRBF2 (ENSSSCG00000024081) #21	EGR2 (ENSSSCG00000010224) #22	ADO (ENSSSCG00000031360) #23	ZNF365 (ENSSSCG00000010222) #25	ENSSSCG00000010221	RTKN2 (ENSSSCG00000039707) #26	ARID5B (ENSSSCG00000010219) #27	CABCOCO1 (ENSSSCG00000033268) #28	TMEM26 (ENSSSCG00000023525) #29	ENSSSCG00000058274	RHOBTB1 (ENSSSCG00000028327) #30	CDK1 (ENSSSCG00000010214) #31	ENSSSCG00000010212 #32	CCDC6 (ENSSSCG00000010211) #34	ENSSSCG00000032953	SLC16A9 (ENSSSCG00000010210) #36	FAM13C (ENSSSCG00000010209) #37
Artiodactyla_a	ANCESTRAL SPECIES	14	ENSGT00940000157520	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT00940000160543 #14	ENSGT01030000234543.B.f #13	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01100000264001	ENSGT00940000156416 #36	ENSGT00900000143228	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b
Camelidae	ANCESTRAL SPECIES	4	ENSGT00940000157520	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT00940000160543 #14	ENSGT01030000234543.B.f #13	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001
Alpaca	MODERN SPECIES	2623																EGR2 (ENSVPAG00000007613) #22	ADO (ENSVPAG00000007612) #23	ZNF365 (ENSVPAG00000007610) #25	RTKN2 (ENSVPAG00000007608) #26	CABCOCO1 (ENSVPAG00000007607) #28	TMEM26 (ENSVPAG00000007606) #29
Arabian camel	MODERN SPECIES	2	PBLD (ENSCDRG00005016819) #7	ATOH7 (ENSCDRG00005016787) #8	MYPN (ENSCDRG00005016585) #9	HERC4 (ENSCDRG00005016223) #10	SIRT1 (ENSCDRG00005016069) #11	DNAJC12 (ENSCDRG00005016011) #12	ENSCDRG00005015988	ENSCDRG00005015931	LRRTM3 (ENSCDRG00005015916) #14	CTNNA3 (ENSCDRG00005015869) #13	ENSCDRG00005015823	ENSCDRG00005015790	REEP3 (ENSCDRG00005015689) #18	JMJD1C (ENSCDRG00005014920) #19	NRBF2 (ENSCDRG00005014793) #21	EGR2 (ENSCDRG00005014716) #22	ADO (ENSCDRG00005014698) #23	ZNF365 (ENSCDRG00005014646) #25	RTKN2 (ENSCDRG00005014583) #26	ENSCDRG00005014544 #27	ENSCDRG00005014475 #27	CABCOCO1 (ENSCDRG00005014400) #28	TMEM26 (ENSCDRG00005014347) #29	RHOBTB1 (ENSCDRG00005014237) #30	CDK1 (ENSCDRG00005014195) #31	ENSCDRG00005014160	ANK3 (ENSCDRG00005012664) #32	CCDC6 (ENSCDRG00005012383) #34	ENSCDRG00005012336	ENSCDRG00005012310	SLC16A9 (ENSCDRG00005012271) #36
Artiodactyla_b	ANCESTRAL SPECIES	13	ENSGT00940000157520	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT00940000160543 #14	ENSGT01030000234543.B.f #13	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01100000264001	ENSGT00940000156416 #36	ENSGT00900000143228	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b
Cetacea	ANCESTRAL SPECIES	15	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT01030000234543.B.e.b ##13	ENSGT00940000163252	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000158654.r	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01100000266036	ENSGT00940000156416 #36	ENSGT00900000143228	ENSGT00950000183033.a.a.d #37
Odontoceti	ANCESTRAL SPECIES	14	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT01030000234543.B.e.b ##13	ENSGT00940000163252	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000158654.r	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01100000266036	ENSGT00940000156416 #36	ENSGT00900000143228	ENSGT00950000183033.a.a.d #37
Odontoceti_a	ANCESTRAL SPECIES	11	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT01030000234543.B.e.b ##13	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01100000266036	ENSGT00940000156416 #36	ENSGT00900000143228	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b
Odontoceti_b	ANCESTRAL SPECIES	14	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT01030000234543.B.e.b ##13	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00950000182802.B.a.a.a.b.a.a.b	ENSGT00390000013594 #34	ENSGT01100000266036	ENSGT00940000156416 #36	ENSGT00900000143228	ENSGT00950000183033.a.a.d #37
Monodontidae	ANCESTRAL SPECIES	14	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT01030000234543.B.e.b ##13	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00950000182802.B.a.a.a.b.a.a.b	ENSGT00390000013594 #34	ENSGT01100000266036	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b
Beluga whale	MODERN SPECIES	56													REEP3 (ENSDLEG00000011032) #18	JMJD1C (ENSDLEG00000011059) #19	NRBF2 (ENSDLEG00000011181) #21	EGR2 (ENSDLEG00000011204) #22	ADO (ENSDLEG00000011209) #23	ZNF365 (ENSDLEG00000011279) #25	RTKN2 (ENSDLEG00000011317) #26	ARID5B (ENSDLEG00000011338) #27	CABCOCO1 (ENSDLEG00000011387) #28	TMEM26 (ENSDLEG00000011417) #29	ENSDLEG00000011441	RHOBTB1 (ENSDLEG00000011454) #30	CDK1 (ENSDLEG00000011518) #31	ANK3 (ENSDLEG00000011908) #32	ENSDLEG00000017045	CCDC6 (ENSDLEG00000017057) #34	SLC16A9 (ENSDLEG00000017063) #36	FAM13C (ENSDLEG00000006892) #37	PHYHIPL (ENSDLEG00000006905)
Narwhal	MODERN SPECIES	311	SLC25A16 (ENSMMNG00015017583)	DNA2 (ENSMMNG00015017542)	RUFY2 (ENSMMNG00015017154)	HNRNPH3 (ENSMMNG00015017060)	PBLD (ENSMMNG00015017026) #7	MYPN (ENSMMNG00015016802) #9	HERC4 (ENSMMNG00015016513) #10	SIRT1 (ENSMMNG00015016378) #11	DNAJC12 (ENSMMNG00015016250) #12	LRRTM3 (ENSMMNG00015016206) #14	CTNNA3 (ENSMMNG00015016145) #13	ENSMMNG00015016066	REEP3 (ENSMMNG00015016031) #18	JMJD1C (ENSMMNG00015015904) #19	NRBF2 (ENSMMNG00015015806) #21	EGR2 (ENSMMNG00015015758) #22	ADO (ENSMMNG00015015748) #23	ZNF365 (ENSMMNG00015015720) #25	RTKN2 (ENSMMNG00015015683) #26	ARID5B (ENSMMNG00015015623) #27	CABCOCO1 (ENSMMNG00015015573) #28	TMEM26 (ENSMMNG00015015516) #29	RHOBTB1 (ENSMMNG00015015499) #30	CDK1 (ENSMMNG00015015475) #31	ENSMMNG00015015458	ENSMMNG00015015447	ANK3 (ENSMMNG00015015095) #32	CCDC6 (ENSMMNG00015014903) #34	ENSMMNG00015014890	SLC16A9 (ENSMMNG00015014872) #36	FAM13C (ENSMMNG00015014829) #37
Vaquita	MODERN SPECIES	7	HNRNPH3 (ENSPSNG00000017903)	PBLD (ENSPSNG00000017813) #7	ATOH7 (ENSPSNG00000017790) #8	MYPN (ENSPSNG00000017208) #9	HERC4 (ENSPSNG00000016699) #10	SIRT1 (ENSPSNG00000016409) #11	ENSPSNG00000016344	DNAJC12 (ENSPSNG00000016132) #12	LRRTM3 (ENSPSNG00000016050) #14	CTNNA3 (ENSPSNG00000015816) #13	ENSPSNG00000015753	ENSPSNG00000015687	REEP3 (ENSPSNG00000015636) #18	JMJD1C (ENSPSNG00000015259) #19	NRBF2 (ENSPSNG00000015149) #21	EGR2 (ENSPSNG00000015063) #22	ADO (ENSPSNG00000015035) #23	ZNF365 (ENSPSNG00000014971) #25	RTKN2 (ENSPSNG00000014902) #26	ARID5B (ENSPSNG00000014736) #27	CABCOCO1 (ENSPSNG00000014615) #28	TMEM26 (ENSPSNG00000014493) #29	RHOBTB1 (ENSPSNG00000014292) #30	CDK1 (ENSPSNG00000014155) #31	ENSPSNG00000014083	ANK3 (ENSPSNG00000012368) #32	CCDC6 (ENSPSNG00000012111) #34	SLC16A9 (ENSPSNG00000012014) #36	ENSPSNG00000011967	FAM13C (ENSPSNG00000011038) #37	PHYHIPL (ENSPSNG00000010830)
Dolphin	MODERN SPECIES	1020																EGR2 (ENSTTRG00000010004) #22	ADO (ENSTTRG00000010002) #23	ZNF365 (ENSTTRG00000009988) #25	RTKN2 (ENSTTRG00000009980) #26	ARID5B (ENSTTRG00000009968) #27
Sperm whale	MODERN SPECIES	12	ATOH7 (ENSPCTG00005004994) #8	MYPN (ENSPCTG00005004741) #9	HERC4 (ENSPCTG00005004555) #10	SIRT1 (ENSPCTG00005004488) #11	DNAJC12 (ENSPCTG00005004448) #12	ENSPCTG00005004399	LRRTM3 (ENSPCTG00005021822) #14	CTNNA3 (ENSPCTG00005021800) #13	ENSPCTG00005021784	ENSPCTG00005021773	ENSPCTG00005021765	ENSPCTG00005021759	REEP3 (ENSPCTG00005021737) #18	JMJD1C (ENSPCTG00005021543) #19	NRBF2 (ENSPCTG00005021512) #21	EGR2 (ENSPCTG00005021490) #22	ADO (ENSPCTG00005021478) #23	ZNF365 (ENSPCTG00005021453) #25	RTKN2 (ENSPCTG00005021419) #26	ARID5B (ENSPCTG00005021363) #27	CABCOCO1 (ENSPCTG00005021317) #28	TMEM26 (ENSPCTG00005021293) #29	RHOBTB1 (ENSPCTG00005021266) #30	CDK1 (ENSPCTG00005021227) #31	ENSPCTG00005021210	ANK3 (ENSPCTG00005020742) #32	CCDC6 (ENSPCTG00005020605) #34	MRLN (ENSPCTG00005020596)	SLC16A9 (ENSPCTG00005020566) #36	FAM13C (ENSPCTG00005019874) #37	PHYHIPL (ENSPCTG00005019686)
Blue whale	MODERN SPECIES	7	HNRNPH3 (ENSBMSG00010012532)	PBLD (ENSBMSG00010012552) #7	ATOH7 (ENSBMSG00010012628) #8	MYPN (ENSBMSG00010012667) #9	HERC4 (ENSBMSG00010012834) #10	SIRT1 (ENSBMSG00010012923) #11	DNAJC12 (ENSBMSG00010012959) #12	CTNNA3 (ENSBMSG00010012988) #13	ENSBMSG00010013010	LRRTM3 (ENSBMSG00010013018) #14	ENSBMSG00010013040	REEP3 (ENSBMSG00010013054) #18	JMJD1C (ENSBMSG00010013100) #19	ENSBMSG00010013156	NRBF2 (ENSBMSG00010013170) #21	EGR2 (ENSBMSG00010013184) #22	ADO (ENSBMSG00010013195) #23	ZNF365 (ENSBMSG00010013210) #25	RTKN2 (ENSBMSG00010013225) #26	ARID5B (ENSBMSG00010013283) #27	CABCOCO1 (ENSBMSG00010013326) #28	TMEM26 (ENSBMSG00010013346) #29	ENSBMSG00010013361	RHOBTB1 (ENSBMSG00010013375) #30	CDK1 (ENSBMSG00010013392) #31	ANK3 (ENSBMSG00010013540) #32	ENSBMSG00010013708	CCDC6 (ENSBMSG00010013722) #34	ENSBMSG00010013740	SLC16A9 (ENSBMSG00010013749) #36	FAM13C (ENSBMSG00010013845) #37
Pecora	ANCESTRAL SPECIES	12	ENSGT00940000157520	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT00940000160543 #14	ENSGT01030000234543.B.f #13	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01100000264001	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276
Yarkand deer	MODERN SPECIES	6	ENSCHYG00000005831	RUFY2 (ENSCHYG00000005352)	HNRNPH3 (ENSCHYG00000005187)	PBLD (ENSCHYG00000026547) #7	ATOH7 (ENSCHYG00000026539) #8	MYPN (ENSCHYG00000026483) #9	HERC4 (ENSCHYG00000026123) #10	SIRT1 (ENSCHYG00000026011) #11	DNAJC12 (ENSCHYG00000025961) #12	LRRTM3 (ENSCHYG00000025928) #14	CTNNA3 (ENSCHYG00000025898) #13	ENSCHYG00000025886	REEP3 (ENSCHYG00000025849) #18	JMJD1C (ENSCHYG00000025503) #19	ENSCHYG00000025450 #21	EGR2 (ENSCHYG00000025433) #22	ADO (ENSCHYG00000025417) #23	ZNF365 (ENSCHYG00000025396) #25	ENSCHYG00000025380	RTKN2 (ENSCHYG00000025340) #26	ARID5B (ENSCHYG00000025278) #27	ENSCHYG00000025249 #28	ENSCHYG00000025219 #29	ENSCHYG00000025136 #30	ENSCHYG00000025085 #31	ENSCHYG00000025062	ENSCHYG00000023912 #32	ENSCHYG00000023664 #34	ENSCHYG00000023580 #30	ENSCHYG00000023526 #31	ENSCHYG00000023396
Percora_a	ANCESTRAL SPECIES	14	ENSGT00940000157520	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT00940000160543 #14	ENSGT01030000234543.B.f #13	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00990000212140	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.a.b.b	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01100000264001	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37
Bovidae	ANCESTRAL SPECIES	27	ENSGT00940000157520	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT00940000160543 #14	ENSGT01030000234543.B.f #13	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00990000212140	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.a.b.b	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01100000264001	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37
Caprinae	ANCESTRAL SPECIES	26	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT00390000018433.s.a.a.b	ENSGT00940000160543 #14	ENSGT01030000234543.B.f #13	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.a.b.b	ENSGT00940000153335.a.b #31	ENSGT00950000182891.a.a.b.a.b.b.b.e.a	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01100000264001	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37
Goat	MODERN SPECIES	20	HERC4 (ENSCHIG00000012304) #10	SIRT1 (ENSCHIG00000011027) #11	ENSCHIG00000010127	ENSCHIG00000015880	DNAJC12 (ENSCHIG00000024728) #12	ENSCHIG00000008056	ENSCHIG00000019480 #13	ENSCHIG00000010807 #13	LRRTM3 (ENSCHIG00000023535) #14	ENSCHIG00000016083 #13	REEP3 (ENSCHIG00000015558) #18	ENSCHIG00000010880	JMJD1C (ENSCHIG00000022251) #19	ENSCHIG00000010873 #21	ENSCHIG00000007340	EGR2 (ENSCHIG00000018766) #22	ADO (ENSCHIG00000026433) #23	ENSCHIG00000010161	ZNF365 (ENSCHIG00000024289) #25	RTKN2 (ENSCHIG00000011108) #26	ARID5B (ENSCHIG00000019296) #27	CABCOCO1 (ENSCHIG00000000104) #28	TMEM26 (ENSCHIG00000000173) #29	RHOBTB1 (ENSCHIG00000000210) #30	ENSCHIG00000019367	CDK1 (ENSCHIG00000000353) #31	ANK3 (ENSCHIG00000000437) #32	ENSCHIG00000020150	CCDC6 (ENSCHIG00000018737) #34	SLC16A9 (ENSCHIG00000025891) #36	FAM13C (ENSCHIG00000018655) #37
Rambouillet Sheep	MODERN SPECIES	17	HNRNPH3 (ENSOARG00020008115)	ENSOARG00020008090	PBLD (ENSOARG00020007987) #7	ATOH7 (ENSOARG00020007963) #8	MYPN (ENSOARG00020007679) #9	HERC4 (ENSOARG00020007038) #10	SIRT1 (ENSOARG00020006830) #11	ENSOARG00020006783 #12	ENSOARG00020006759	LRRTM3 (ENSOARG00020006696) #14	ENSOARG00020006636	CTNNA3 (ENSOARG00020006501) #13	REEP3 (ENSOARG00020024896) #18	JMJD1C (ENSOARG00020024597) #19	NRBF2 (ENSOARG00020024553) #21	EGR2 (ENSOARG00020024540) #22	ADO (ENSOARG00020024530) #23	ZNF365 (ENSOARG00020024513) #25	RTKN2 (ENSOARG00020024459) #26	ARID5B (ENSOARG00020024263) #27	CABCOCO1 (ENSOARG00020024239) #28	TMEM26 (ENSOARG00020024213) #29	RHOBTB1 (ENSOARG00020024171) #30	CDK1 (ENSOARG00020024130) #31	ENSOARG00020024112	ANK3 (ENSOARG00020023359) #32	CCDC6 (ENSOARG00020023260) #34	MRLN (ENSOARG00020023237)	SLC16A9 (ENSOARG00020023213) #36	FAM13C (ENSOARG00020022210) #37	PHYHIPL (ENSOARG00020022039)
Bovinae	ANCESTRAL SPECIES	30	ENSGT00940000157520	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT00940000160543 #14	ENSGT01030000234543.B.f #13	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00390000007029.j.o.b	ENSGT00940000161078 #27	ENSGT00990000212140	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.a.b.b	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01100000264001	ENSGT00940000156416 #36
American bison	MODERN SPECIES	3294												ENSBBBG00000014225	REEP3 (ENSBBBG00000003223) #18	JMJD1C (ENSBBBG00000014196) #19	NRBF2 (ENSBBBG00000014167) #21	EGR2 (ENSBBBG00000014159) #22	ADO (ENSBBBG00000014158) #23	ZNF365 (ENSBBBG00000014150) #25	RTKN2 (ENSBBBG00000014148) #26	ENSBBBG00000008449	ARID5B (ENSBBBG00000014139) #27	CABCOCO1 (ENSBBBG00000014123) #28	TMEM26 (ENSBBBG00000003172) #29	RHOBTB1 (ENSBBBG00000014107) #30	ENSBBBG00000014090	CDK1 (ENSBBBG00000014079) #31
Bos	ANCESTRAL SPECIES	27	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT00940000160543 #14	ENSGT01030000234543.B.f #13	ENSGT00940000158794.e #18	ENSGT00940000158794.f #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00390000007029.j.o.b	ENSGT00940000161078 #27	ENSGT00990000212140	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.a.b.b	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01100000264001	ENSGT00940000156416 #36
Bos_b	ANCESTRAL SPECIES	32	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT00940000160543 #14	ENSGT01030000234543.B.f #13	ENSGT00940000159223.m	ENSGT00940000158794.f #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00390000007029.j.o.b	ENSGT00940000161078 #27	ENSGT00990000212140	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.a.b.b	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01100000264001	ENSGT00940000162956.c.a.b
Cow	MODERN SPECIES	20	PBLD (ENSBTAG00000014315) #7	ATOH7 (ENSBTAG00000017521) #8	MYPN (ENSBTAG00000017509) #9	HERC4 (ENSBTAG00000014029) #10	SIRT1 (ENSBTAG00000014023) #11	ENSBTAG00000051268	DNAJC12 (ENSBTAG00000010932) #12	ENSBTAG00000045493	LRRTM3 (ENSBTAG00000016885) #14	CTNNA3 (ENSBTAG00000045699) #13	ENSBTAG00000036111	REEP3 (ENSBTAG00000019755) #18	JMJD1C (ENSBTAG00000001573) #19	NRBF2 (ENSBTAG00000012476) #21	ENSBTAG00000055021	EGR2 (ENSBTAG00000046409) #22	ADO (ENSBTAG00000045717) #23	ZNF365 (ENSBTAG00000010591) #25	RTKN2 (ENSBTAG00000014020) #26	ENSBTAG00000040018	ARID5B (ENSBTAG00000051333) #27	ENSBTAG00000050717	CABCOCO1 (ENSBTAG00000010967) #28	TMEM26 (ENSBTAG00000014484) #29	RHOBTB1 (ENSBTAG00000019164) #30	ENSBTAG00000035206	CDK1 (ENSBTAG00000010109) #31	ENSBTAG00000050189 #32	ANK3 (ENSBTAG00000019052) #32	CCDC6 (ENSBTAG00000003189) #34	MRLN (ENSBTAG00000050076)
Hybrid Bos Indicus	MODERN SPECIES	20	DNA2 (ENSBIXG00005019070)	RUFY2 (ENSBIXG00005019210)	HNRNPH3 (ENSBIXG00005006029)	PBLD (ENSBIXG00005019323) #7	MYPN (ENSBIXG00005019415) #9	HERC4 (ENSBIXG00005019667) #10	SIRT1 (ENSBIXG00005005669) #11	DNAJC12 (ENSBIXG00005019841) #12	ENSBIXG00005019866	LRRTM3 (ENSBIXG00005019912) #14	CTNNA3 (ENSBIXG00005003259) #13	ENSBIXG00005019978	ENSBIXG00005020031 #18	JMJD1C (ENSBIXG00005020204) #19	NRBF2 (ENSBIXG00005020254) #21	EGR2 (ENSBIXG00005020273) #22	ADO (ENSBIXG00005020283) #23	ENSBIXG00005020285	ZNF365 (ENSBIXG00005020318) #25	ENSBIXG00005006257	RTKN2 (ENSBIXG00005007064) #26	ARID5B (ENSBIXG00005020443) #27	CABCOCO1 (ENSBIXG00005020497) #28	TMEM26 (ENSBIXG00005020543) #29	RHOBTB1 (ENSBIXG00005020581) #30	ENSBIXG00005020589	ENSBIXG00005020597	CDK1 (ENSBIXG00005020665) #31	ENSBIXG00005020706	ANK3 (ENSBIXG00005020866) #32	CCDC6 (ENSBIXG00005020961) #34
Bos_a	ANCESTRAL SPECIES	25	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT00940000160543 #14	ENSGT01030000234543.B.f #13	ENSGT00940000158794.e #18	ENSGT00940000158794.f #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00390000007029.j.o.b	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.a.b.b	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01100000264001	ENSGT00940000156416.k #36	ENSGT00950000183033.a.a.d #37
Domestic yak	MODERN SPECIES	19	PBLD (ENSBGRG00000008695) #7	ATOH7 (ENSBGRG00000008682) #8	MYPN (ENSBGRG00000008236) #9	HERC4 (ENSBGRG00000007633) #10	SIRT1 (ENSBGRG00000007475) #11	DNAJC12 (ENSBGRG00000007326) #12	LRRTM3 (ENSBGRG00000007238) #14	CTNNA3 (ENSBGRG00000007162) #13	ENSBGRG00000026048 #18	ENSBGRG00000026027 #18	ENSBGRG00000026015	JMJD1C (ENSBGRG00000025856) #19	NRBF2 (ENSBGRG00000025841) #21	ENSBGRG00000025837	ENSBGRG00000025835	EGR2 (ENSBGRG00000025832) #22	ADO (ENSBGRG00000025828) #23	ZNF365 (ENSBGRG00000025826) #25	ENSBGRG00000025822	ENSBGRG00000025819	RTKN2 (ENSBGRG00000025811) #26	ARID5B (ENSBGRG00000025786) #27	ENSBGRG00000025779	CABCOCO1 (ENSBGRG00000025767) #28	TMEM26 (ENSBGRG00000025752) #29	RHOBTB1 (ENSBGRG00000025733) #30	ENSBGRG00000025713	CDK1 (ENSBGRG00000025652) #31	ANK3 (ENSBGRG00000025327) #32	CCDC6 (ENSBGRG00000025238) #34	ENSBGRG00000025228
Wild yak	MODERN SPECIES	832																EGR2 (ENSBMUG00000012080) #22	ADO (ENSBMUG00000012076) #23	ZNF365 (ENSBMUG00000012071) #25	RTKN2 (ENSBMUG00000012055) #26	ENSBMUG00000012037	ARID5B (ENSBMUG00000012020) #27
Siberian musk deer	MODERN SPECIES	1227	HNRNPH3 (ENSMMSG00000022944)	PBLD (ENSMMSG00000022935) #7	ATOH7 (ENSMMSG00000022931) #8	MYPN (ENSMMSG00000022910) #9	HERC4 (ENSMMSG00000022751) #10	SIRT1 (ENSMMSG00000022691) #11	DNAJC12 (ENSMMSG00000022667) #12	ENSMMSG00000022657	LRRTM3 (ENSMMSG00000022647) #14	CTNNA3 (ENSMMSG00000022622) #13	ENSMMSG00000022604	ENSMMSG00000022592	REEP3 (ENSMMSG00000022574) #18	JMJD1C (ENSMMSG00000022469) #19	NRBF2 (ENSMMSG00000022442) #21	EGR2 (ENSMMSG00000022430) #22	ADO (ENSMMSG00000022422) #23	ENSMMSG00000022407	ZNF365 (ENSMMSG00000022399) #25	RTKN2 (ENSMMSG00000022387) #26	ARID5B (ENSMMSG00000022357) #27	ENSMMSG00000022340	CABCOCO1 (ENSMMSG00000022331) #28	TMEM26 (ENSMMSG00000022321) #29	RHOBTB1 (ENSMMSG00000022296) #30	ENSMMSG00000022277	CDK1 (ENSMMSG00000022254) #31	ANK3 (ENSMMSG00000021092) #32	CCDC6 (ENSMMSG00000020954) #34	ENSMMSG00000020942	SLC16A9 (ENSMMSG00000020920) #36
Laurasiatheria_b	ANCESTRAL SPECIES	15	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT01030000234543.B.e.b ##13	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001
Carnivora	ANCESTRAL SPECIES	16	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT01030000234543.B.e.b ##13	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01100000264127	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276
Caniformia	ANCESTRAL SPECIES	13	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.e.a ##13	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT01030000234543.B.e.b ##13	ENSGT01100000263600.a.b	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01100000264127	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276
Caniformia_b	ANCESTRAL SPECIES	10	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.e.a ##13	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT01030000234543.B.e.b ##13	ENSGT01100000263600.a.b	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00940000167268.c	ENSGT00390000013594 #34	ENSGT01100000264127	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b
Ursidae	ANCESTRAL SPECIES	5	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00940000182429	ENSGT00950000186164	ENSGT01100000263600.a.b	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00390000013550.b	ENSGT00940000154939 #32	ENSGT00940000167268.c	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b.f
Ursus	ANCESTRAL SPECIES	6	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00940000182429	ENSGT00950000186164	ENSGT01100000263600.a.b	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00390000013550.b	ENSGT00940000154939 #32	ENSGT00940000167268.c	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b.f
American black bear	MODERN SPECIES	526																EGR2 (ENSUAMG00000001078) #22	ADO (ENSUAMG00000001057) #23	ZNF365 (ENSUAMG00000001021) #25	ENSUAMG00000000985 #26	ARID5B (ENSUAMG00000000977) #27
Polar bear	MODERN SPECIES	197	HNRNPH3 (ENSUMAG00000007264)	PBLD (ENSUMAG00000007253) #7	MYPN (ENSUMAG00000007208) #9	HERC4 (ENSUMAG00000007163) #10	SIRT1 (ENSUMAG00000007147) #11	ENSUMAG00000007142	DNAJC12 (ENSUMAG00000007137) #12	ENSUMAG00000007115 #13	ENSUMAG00000007087 #13	LRRTM3 (ENSUMAG00000007080) #14	ENSUMAG00000007064	ENSUMAG00000007044 ##13	ENSUMAG00000007010	REEP3 (ENSUMAG00000007008) #18	JMJD1C (ENSUMAG00000006986) #19	EGR2 (ENSUMAG00000006963) #22	ZNF365 (ENSUMAG00000006948) #25	ENSUMAG00000006935 #26	ARID5B (ENSUMAG00000006932) #27	CABCOCO1 (ENSUMAG00000006919) #28	TMEM26 (ENSUMAG00000006907) #29	RHOBTB1 (ENSUMAG00000006878) #30	CDK1 (ENSUMAG00000006871) #31	ENSUMAG00000006863	ENSUMAG00000006796 #32	ENSUMAG00000006694 #32	ENSUMAG00000006676	CCDC6 (ENSUMAG00000006648) #34	SLC16A9 (ENSUMAG00000006638) #36	FAM13C (ENSUMAG00000006625) #37	PHYHIPL (ENSUMAG00000006623)
Giant Panda	MODERN SPECIES	16	HNRNPH3 (ENSAMEG00000018064)	PBLD (ENSAMEG00000018075) #7	ATOH7 (ENSAMEG00000019067) #8	MYPN (ENSAMEG00000018087) #9	ENSAMEG00000018099	HERC4 (ENSAMEG00000018102) #10	SIRT1 (ENSAMEG00000018117) #11	DNAJC12 (ENSAMEG00000018124) #12	LRRTM3 (ENSAMEG00000017141) #14	ENSAMEG00000030196	ENSAMEG00000024224	CTNNA3 (ENSAMEG00000024140) #13	REEP3 (ENSAMEG00000009500) #18	JMJD1C (ENSAMEG00000009563) #19	NRBF2 (ENSAMEG00000009590) #21	EGR2 (ENSAMEG00000026807) #22	ADO (ENSAMEG00000031507) #23	ZNF365 (ENSAMEG00000025122) #25	RTKN2 (ENSAMEG00000003646) #26	ARID5B (ENSAMEG00000003626) #27	CABCOCO1 (ENSAMEG00000003617) #28	ENSAMEG00000027322	TMEM26 (ENSAMEG00000003591) #29	ENSAMEG00000026047	RHOBTB1 (ENSAMEG00000003559) #30	CDK1 (ENSAMEG00000003520) #31	ENSAMEG00000028814	ANK3 (ENSAMEG00000003412) #32	ENSAMEG00000025441	CCDC6 (ENSAMEG00000003392) #34	SLC16A9 (ENSAMEG00000003385) #36
Mustelinae	ANCESTRAL SPECIES	161											ENSGT00940000160543 #14	ENSGT01030000234543.B.e.b ##13	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01100000264127	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b
American mink	MODERN SPECIES	124										ENSNVIG00000011963	ENSNVIG00000011946	ENSNVIG00000011938	REEP3 (ENSNVIG00000011904) #18	JMJD1C (ENSNVIG00000011799) #19	NRBF2 (ENSNVIG00000011777) #21	EGR2 (ENSNVIG00000011750) #22	ADO (ENSNVIG00000011743) #23	ZN365 (ENSNVIG00000011711) #25	RTKN2 (ENSNVIG00000011675) #26	ARID5B (ENSNVIG00000011642) #27	CJ107 (ENSNVIG00000011624) #28	TMM26 (ENSNVIG00000011590) #29	RHOBTB1 (ENSNVIG00000011567) #30	CDK1 (ENSNVIG00000011491) #31	ENSNVIG00000011478	ANK3 (ENSNVIG00000011085) #32	ENSNVIG00000011075	ENSNVIG00000011064	CCDC6 (ENSNVIG00000011054) #34	ENSNVIG00000011045	SLC16A9 (ENSNVIG00000011027) #36
Ferret	MODERN SPECIES	276										ENSMPUG00000011137 ##13	ENSMPUG00000011134	REEP3 (ENSMPUG00000011132) #18	ENSMPUG00000019953	JMJD1C (ENSMPUG00000011122) #19	NRBF2 (ENSMPUG00000011106) #21	EGR2 (ENSMPUG00000011103) #22	ADO (ENSMPUG00000019952) #23	ENSMPUG00000011097	ZNF365 (ENSMPUG00000011094) #25	RTKN2 (ENSMPUG00000011086) #26	ENSMPUG00000011082	ARID5B (ENSMPUG00000011076) #27	CABCOCO1 (ENSMPUG00000011071) #28	TMEM26 (ENSMPUG00000011065) #29	ENSMPUG00000019951	RHOBTB1 (ENSMPUG00000011060) #30	CDK1 (ENSMPUG00000011057) #31	ENSMPUG00000019950	ENSMPUG00000019949	ANK3 (ENSMPUG00000011035) #32	CCDC6 (ENSMPUG00000011027) #34
Canidae	ANCESTRAL SPECIES	7	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000157514.b	ENSGT00940000159378 #12	ENSGT01030000234543.B.e.a ##13	ENSGT00940000160543 #14	ENSGT01030000234543.B.e.b ##13	ENSGT01100000263600.a.b	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01100000264127	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00950000182971.A.c.a.b
Red fox	MODERN SPECIES	99					TFPI (ENSVVUG00000008954)	CALCRL (ENSVVUG00000008949)	ZSWIM2 (ENSVVUG00000008938)	FAM171B (ENSVVUG00000008928)	ITGAV (ENSVVUG00000008907)	ENSVVUG00000008903	ENSVVUG00000008890	REEP3 (ENSVVUG00000008871) #18	ENSVVUG00000008867	JMJD1C (ENSVVUG00000008820) #19	NRBF2 (ENSVVUG00000008808) #21	EGR2 (ENSVVUG00000008782) #22	ADO (ENSVVUG00000008776) #23	ZNF365 (ENSVVUG00000008767) #25	RTKN2 (ENSVVUG00000008754) #26	ARID5B (ENSVVUG00000008742) #27	CABCOCO1 (ENSVVUG00000008718) #28	ENSVVUG00000008711	TMEM26 (ENSVVUG00000008701) #29	ENSVVUG00000008693	RHOBTB1 (ENSVVUG00000008648) #30	CDK1 (ENSVVUG00000008619) #31	ENSVVUG00000008576 #32	ENSVVUG00000008462 #32	ENSVVUG00000008456	CCDC6 (ENSVVUG00000008431) #34	SLC16A9 (ENSVVUG00000008428) #36
Canis_lupus	ANCESTRAL SPECIES	12	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000157514.b	ENSGT00940000159378 #12	ENSGT00940000160543 #14	ENSGT01030000234543.B.f #13	ENSGT01100000263600.a.b	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01100000264127	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00950000182971.A.c.a.b
Dingo	MODERN SPECIES	324	ATOH7 (ENSCAFG00020026274) #8	MYPN (ENSCAFG00020026277) #9	HERC4 (ENSCAFG00020026341) #10	ENSCAFG00020026565	DNAJC12 (ENSCAFG00020026576) #12	ENSCAFG00020026577	ENSCAFG00020026579 ##13	ENSCAFG00020026581	LRRTM3 (ENSCAFG00020026584) #14	ENSCAFG00020026600 ##13	ENSCAFG00020026602	ENSCAFG00020026604	REEP3 (ENSCAFG00020026612) #18	JMJD1C (ENSCAFG00020026632) #19	NRBF2 (ENSCAFG00020026674) #21	EGR2 (ENSCAFG00020026676) #22	ADO (ENSCAFG00020026677) #23	ZNF365 (ENSCAFG00020026679) #25	ENSCAFG00020026681 #26	ARID5B (ENSCAFG00020026682) #27	CABCOCO1 (ENSCAFG00020026683) #28	ENSCAFG00020026685	TMEM26 (ENSCAFG00020026691) #29	RHOBTB1 (ENSCAFG00020026694) #30	CDK1 (ENSCAFG00020026698) #31	ENSCAFG00020026701	ENSCAFG00020026712 #32	ENSCAFG00020026801 #32	CCDC6 (ENSCAFG00020026872) #34	SLC16A9 (ENSCAFG00020026878) #36	FAM13C (ENSCAFG00020026881) #37
Dog	MODERN SPECIES	32	HNRNPH3 (ENSCAFG00845001919)	PBLD (ENSCAFG00845001864) #7	ATOH7 (ENSCAFG00845001829) #8	MYPN (ENSCAFG00845001702) #9	HERC4 (ENSCAFG00845001312) #10	SIRT1 (ENSCAFG00845001191)	DNAJC12 (ENSCAFG00845001094) #12	ENSCAFG00845000962	LRRTM3 (ENSCAFG00845000940) #14	CTNNA3 (ENSCAFG00845000907) #13	ENSCAFG00845000881	ENSCAFG00845000861	REEP3 (ENSCAFG00845000841) #18	JMJD1C (ENSCAFG00845000508) #19	NRBF2 (ENSCAFG00845000404) #21	EGR2 (ENSCAFG00845000370) #22	ADO (ENSCAFG00845000344) #23	ZNF365 (ENSCAFG00845003326) #25	RTKN2 (ENSCAFG00845003274) #26	ARID5B (ENSCAFG00845003220) #27	CABCOCO1 (ENSCAFG00845003174) #28	TMEM26 (ENSCAFG00845003132) #29	ENSCAFG00845003111	RHOBTB1 (ENSCAFG00845003029) #30	CDK1 (ENSCAFG00845002973) #31	ANK3 (ENSCAFG00845002592) #32	CCDC6 (ENSCAFG00845002409) #34	ENSCAFG00845002372	SLC16A9 (ENSCAFG00845002335) #36	FAM13C (ENSCAFG00845002255) #37	PHYHIPL (ENSCAFG00845002117)
Felidae	ANCESTRAL SPECIES	14	ENSGT00940000157520	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00390000016927.n	ENSGT00940000154939 #32	ENSGT00940000167268	ENSGT00910000148620.a	ENSGT00390000013594 #34	ENSGT01100000264127	ENSGT00940000156416 #36
Panthera	ANCESTRAL SPECIES	8	ENSGT00940000157520	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00390000016927.n	ENSGT00940000154939 #32	ENSGT00910000148620.a	ENSGT00390000013594 #34	ENSGT01100000264127	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37
Tiger	MODERN SPECIES	507	TET1 (ENSPTIG00000010239)	SLC25A16 (ENSPTIG00000010618)	DNA2 (ENSPTIG00000010858)	RUFY2 (ENSPTIG00000011514)	HNRNPH3 (ENSPTIG00000011896)	PBLD (ENSPTIG00000012140) #7	MYPN (ENSPTIG00000012690) #9	HERC4 (ENSPTIG00000014159) #10	SIRT1 (ENSPTIG00000015258) #11	DNAJC12 (ENSPTIG00000015389) #12	CTNNA3 (ENSPTIG00000016411) #13	LRRTM3 (ENSPTIG00000017256) #14	REEP3 (ENSPTIG00000017389) #18	JMJD1C (ENSPTIG00000017593) #19	NRBF2 (ENSPTIG00000018356) #21	EGR2 (ENSPTIG00000018412) #22	ZNF365 (ENSPTIG00000018614) #25	RTKN2 (ENSPTIG00000019007) #26	ARID5B (ENSPTIG00000019245) #27	CABCOCO1 (ENSPTIG00000019275) #28	TMEM26 (ENSPTIG00000019392) #29	RHOBTB1 (ENSPTIG00000019718) #30	CDK1 (ENSPTIG00000019837) #31	ANK3 (ENSPTIG00000020339) #32	ENSPTIG00000006450	CCDC6 (ENSPTIG00000003601) #34	ENSPTIG00000006455	SLC16A9 (ENSPTIG00000004788) #36	FAM13C (ENSPTIG00000005239) #37	PHYHIPL (ENSPTIG00000006475)	BICC1 (ENSPTIG00000006974)
Panthera_a	ANCESTRAL SPECIES	9	ENSGT00940000157520	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00390000016927.n	ENSGT00940000154939 #32	ENSGT00910000148620.a	ENSGT00390000013594 #34	ENSGT01100000264127	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37
lion	MODERN SPECIES	11	SLC25A16 (ENSPLOG00000017896)	DNA2 (ENSPLOG00000017976)	RUFY2 (ENSPLOG00000018096)	HNRNPH3 (ENSPLOG00000018438)	PBLD (ENSPLOG00000018520) #7	ATOH7 (ENSPLOG00000018730) #8	MYPN (ENSPLOG00000018785) #9	HERC4 (ENSPLOG00000019227) #10	SIRT1 (ENSPLOG00000019446) #11	DNAJC12 (ENSPLOG00000019540) #12	CTNNA3 (ENSPLOG00000019660) #13	LRRTM3 (ENSPLOG00000019746) #14	REEP3 (ENSPLOG00000019803) #18	JMJD1C (ENSPLOG00000019911) #19	NRBF2 (ENSPLOG00000020225) #21	EGR2 (ENSPLOG00000020280) #22	ADO (ENSPLOG00000020311) #23	ZNF365 (ENSPLOG00000020324) #25	RTKN2 (ENSPLOG00000020365) #26	ARID5B (ENSPLOG00000020449) #27	CABCOCO1 (ENSPLOG00000020546) #28	TMEM26 (ENSPLOG00000020579) #29	RHOBTB1 (ENSPLOG00000020610) #30	CDK1 (ENSPLOG00000020646) #31	ANK3 (ENSPLOG00000020811) #32	ENSPLOG00000021334	CCDC6 (ENSPLOG00000021341) #34	ENSPLOG00000021359	SLC16A9 (ENSPLOG00000021376) #36	FAM13C (ENSPLOG00000021430) #37	PHYHIPL (ENSPLOG00000021646)
leopard	MODERN SPECIES	11	DNA2 (ENSPPRG00000001961)	RUFY2 (ENSPPRG00000003327)	HNRNPH3 (ENSPPRG00000004134)	PBLD (ENSPPRG00000005422) #7	ATOH7 (ENSPPRG00000018381) #8	MYPN (ENSPPRG00000008998) #9	HERC4 (ENSPPRG00000011426) #10	SIRT1 (ENSPPRG00000013011) #11	DNAJC12 (ENSPPRG00000014809) #12	LRRTM3 (ENSPPRG00000016070) #14	ENSPPRG00000016311 #13	CTNNA3 (ENSPPRG00000020624) #13	REEP3 (ENSPPRG00000000146) #18	JMJD1C (ENSPPRG00000003266) #19	NRBF2 (ENSPPRG00000003508) #21	EGR2 (ENSPPRG00000003813) #22	ADO (ENSPPRG00000019015) #23	ZNF365 (ENSPPRG00000004657) #25	ENSPPRG00000004955	ENSPPRG00000005317	RTKN2 (ENSPPRG00000006371) #26	ARID5B (ENSPPRG00000006738) #27	CABCOCO1 (ENSPPRG00000007284) #28	TMEM26 (ENSPPRG00000007420) #29	RHOBTB1 (ENSPPRG00000008172) #30	ENSPPRG00000009548 #31	ENSPPRG00000010127	ANK3 (ENSPPRG00000022898) #32	ENSPPRG00000001407	ENSPPRG00000019514	CCDC6 (ENSPPRG00000002480) #34
Cat	MODERN SPECIES	242	HNRNPH3 (ENSFCAG00000032291)	PBLD (ENSFCAG00000003426) #7	ATOH7 (ENSFCAG00000003425) #8	MYPN (ENSFCAG00000003424) #9	HERC4 (ENSFCAG00000029350) #10	SIRT1 (ENSFCAG00000012373) #11	DNAJC12 (ENSFCAG00000040390) #12	LRRTM3 (ENSFCAG00000030902) #14	ENSFCAG00000050858	CTNNA3 (ENSFCAG00000036242) #13	ENSFCAG00000047280	REEP3 (ENSFCAG00000034156) #18	ENSFCAG00000037493	JMJD1C (ENSFCAG00000044594) #19	NRBF2 (ENSFCAG00000036245) #21	EGR2 (ENSFCAG00000008599) #22	ADO (ENSFCAG00000029405) #23	ZNF365 (ENSFCAG00000023311) #25	RTKN2 (ENSFCAG00000027409) #26	ARID5B (ENSFCAG00000035450) #27	CABCOCO1 (ENSFCAG00000022739) #28	TMEM26 (ENSFCAG00000022834) #29	RHOBTB1 (ENSFCAG00000015553) #30	CDK1 (ENSFCAG00000014972) #31	ENSFCAG00000009714	ANK3 (ENSFCAG00000031392) #32	ENSFCAG00000024137	ENSFCAG00000042575	CCDC6 (ENSFCAG00000041254) #34	ENSFCAG00000043794	SLC16A9 (ENSFCAG00000025804) #36
Laurasiatheria_c	ANCESTRAL SPECIES	15	ENSGT00940000157520	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT00940000160543 #14	ENSGT01030000234543.B.f #13	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01100000266276	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276
Equus	ANCESTRAL SPECIES	9	ENSGT00940000157520	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924.a #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT00940000160543 #14	ENSGT01030000234543.B.f #13	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078.m #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000155031.c	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01100000266276	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b
Horse	MODERN SPECIES		DNA2 (ENSECAG00000022137)	ENSECAG00000056796	HNRNPH3 (ENSECAG00000007190)	RUFY2 (ENSECAG00000011084)	PBLD (ENSECAG00000000091) #7	MYPN (ENSECAG00000015157) #9	SIRT1 (ENSECAG00000013909) #11	HERC4 (ENSECAG00000015733) #10	DNAJC12 (ENSECAG00000010494) #12	LRRTM3 (ENSECAG00000002417) #14	CTNNA3 (ENSECAG00000008248) #13	REEP3 (ENSECAG00000019662) #18	ENSECAG00000054871	JMJD1C (ENSECAG00000012941) #19	NRBF2 (ENSECAG00000011036) #21	EGR2 (ENSECAG00000010818) #22	ADO (ENSECAG00000010803) #23	ZNF365 (ENSECAG00000010245) #25	ENSECAG00000053502	RTKN2 (ENSECAG00000000259) #26	ARID5B (ENSECAG00000019795) #27	ENSECAG00000053960 #27	CABCOCO1 (ENSECAG00000018759) #28	TMEM26 (ENSECAG00000017826) #29	ENSECAG00000036439	RHOBTB1 (ENSECAG00000011559) #30	CDK1 (ENSECAG00000009716) #31	ANK3 (ENSECAG00000009700) #32	CCDC6 (ENSECAG00000006268) #34	SLC16A9 (ENSECAG00000000847) #36	FAM13C (ENSECAG00000000046) #37
Donkey	MODERN SPECIES	11	RUFY2 (ENSEASG00005015402)	PBLD (ENSEASG00005015378) #7	ATOH7 (ENSEASG00005015375) #8	MYPN (ENSEASG00005015371) #9	ENSEASG00005015368 #10	ENSEASG00005015346 #10	SIRT1 (ENSEASG00005015345) #11	DNAJC12 (ENSEASG00005015344) #12	LRRTM3 (ENSEASG00005015340) #14	ENSEASG00005033938	CTNNA3 (ENSEASG00005015093) #13	ENSEASG00005015063	REEP3 (ENSEASG00005015059) #18	JMJD1C (ENSEASG00005015055) #19	NRBF2 (ENSEASG00005031871) #21	EGR2 (ENSEASG00005015048) #22	ADO (ENSEASG00005015047) #23	ZNF365 (ENSEASG00005015045) #25	RTKN2 (ENSEASG00005033911) #26	ARID5B (ENSEASG00005015041) #27	CABCOCO1 (ENSEASG00005015036) #28	TMEM26 (ENSEASG00005033405) #29	ENSEASG00005015028	RHOBTB1 (ENSEASG00005015015) #30	CDK1 (ENSEASG00005015011) #31	ANK3 (ENSEASG00005013882) #32	CCDC6 (ENSEASG00005013813) #34	ENSEASG00005028425	SLC16A9 (ENSEASG00005013808) #36	FAM13C (ENSEASG00005013804) #37	PHYHIPL (ENSEASG00005027284)
Chiroptera	ANCESTRAL SPECIES	6	ENSGT00940000157520	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01100000266276	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276
Megabat	MODERN SPECIES	843																ENSPVAG00000011449 #22	ZNF365 (ENSPVAG00000011447) #25
Microchiroptera	ANCESTRAL SPECIES	5	ENSGT00940000157520	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.f #13	ENSGT00940000160543 #14	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT01100000266276	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276
Greater horseshoe bat	MODERN SPECIES	7	RUFY2 (ENSRFEG00010007641)	ENSRFEG00010007440	PBLD (ENSRFEG00010007374) #7	ATOH7 (ENSRFEG00010007340) #8	MYPN (ENSRFEG00010007120) #9	HERC4 (ENSRFEG00010006833) #10	SIRT1 (ENSRFEG00010006706) #11	ENSRFEG00010006664	DNAJC12 (ENSRFEG00010006618) #12	LRRTM3 (ENSRFEG00010006579) #14	CTNNA3 (ENSRFEG00010006505) #13	ENSRFEG00010006474	REEP3 (ENSRFEG00010006443) #18	JMJD1C (ENSRFEG00010022134) #19	NRBF2 (ENSRFEG00010022129) #21	EGR2 (ENSRFEG00010022128) #22	ADO (ENSRFEG00010022127) #23	ZNF365 (ENSRFEG00010022124) #25	RTKN2 (ENSRFEG00010022115) #26	ARID5B (ENSRFEG00010022107) #27	CABCOCO1 (ENSRFEG00010022101) #28	TMEM26 (ENSRFEG00010022097) #29	RHOBTB1 (ENSRFEG00010022094) #30	ENSRFEG00010022093 #31	ENSRFEG00010022090	ANK3 (ENSRFEG00010022028) #32	CCDC6 (ENSRFEG00010021955) #34	ENSRFEG00010021951	SLC16A9 (ENSRFEG00010021948) #36	FAM13C (ENSRFEG00010021938) #37	PHYHIPL (ENSRFEG00010021933)
Atlantogenata	ANCESTRAL SPECIES	10	ENSGT00940000157520	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT00940000160543 #14	ENSGT01030000234543.B #13	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00940000165236	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276
Afrotheria	ANCESTRAL SPECIES	4	ENSGT00940000157520	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT00940000160543 #14	ENSGT01030000234543.B #13	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00940000165236	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b
Afrotheria_a	ANCESTRAL SPECIES	4	ENSGT00940000157520	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT00940000160543 #14	ENSGT01030000234543.B #13	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00940000165236	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b
Elephant	MODERN SPECIES	3	SLC25A16 (ENSLAFG00000006168)	DNA2 (ENSLAFG00000012975)	RUFY2 (ENSLAFG00000012964)	HNRNPH3 (ENSLAFG00000012955)	PBLD (ENSLAFG00000012952) #7	ATOH7 (ENSLAFG00000012951) #8	MYPN (ENSLAFG00000009289) #9	HERC4 (ENSLAFG00000009283) #10	SIRT1 (ENSLAFG00000009280) #11	DNAJC12 (ENSLAFG00000009276) #12	LRRTM3 (ENSLAFG00000009791) #14	CTNNA3 (ENSLAFG00000018083) #13	REEP3 (ENSLAFG00000017678) #18	JMJD1C (ENSLAFG00000001477) #19	NRBF2 (ENSLAFG00000007532) #21	EGR2 (ENSLAFG00000006198) #22	ZNF365 (ENSLAFG00000008338) #25	ENSLAFG00000005497 #26	ARID5B (ENSLAFG00000015576) #27	ENSLAFG00000005335	TMEM26 (ENSLAFG00000026775) #29	RHOBTB1 (ENSLAFG00000002786) #30	CDK1 (ENSLAFG00000028354) #31	ANK3 (ENSLAFG00000023164) #32	CCDC6 (ENSLAFG00000015336) #34	SLC16A9 (ENSLAFG00000006123) #36	FAM13C (ENSLAFG00000005914) #37	PHYHIPL (ENSLAFG00000005911)	BICC1 (ENSLAFG00000007749)	TFAM (ENSLAFG00000012891)	UBE2D1 (ENSLAFG00000000901)
Hyrax	MODERN SPECIES	7787																EGR2 (ENSPCAG00000008129) #22
Tenrec	MODERN SPECIES	18451																EGR2 (ENSETEG00000003424) #22
Xenarthra	ANCESTRAL SPECIES	892																ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28
Sloth	MODERN SPECIES	1986																EGR2 (ENSCHOG00000001005) #22
Armadillo	MODERN SPECIES	1927															ENSDNOG00000033422	EGR2 (ENSDNOG00000048621) #22	ADO (ENSDNOG00000048738) #23	ZNF365 (ENSDNOG00000007049) #25	RTKN2 (ENSDNOG00000038486) #26	ARID5B (ENSDNOG00000043861) #27	CABCOCO1 (ENSDNOG00000034594) #28
Marsupialia	ANCESTRAL SPECIES		ENSGT00530000063723.b.h	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.d #13	ENSGT01030000234543.B.c.a #13	ENSGT00940000160543 #14	ENSGT01030000234543.B.c.b #13	ENSGT00940000164766	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001
Marsupialia_b	ANCESTRAL SPECIES		ENSGT00530000063723.b.h	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.d #13	ENSGT01030000234543.B.c.a #13	ENSGT00940000160543 #14	ENSGT01030000234543.B.c.b #13	ENSGT00940000164766	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001
Diprotodontia	ANCESTRAL SPECIES	48	ENSGT00940000157720	ENSGT00530000063723.b.h	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.d #13	ENSGT00940000160543 #14	ENSGT01030000234543.B.c.b #13	ENSGT00940000164766	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b
Diprotodontia_a	ANCESTRAL SPECIES	42	ENSGT00940000157720	ENSGT00530000063723.b.h	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.d #13	ENSGT00940000160543 #14	ENSGT01030000234543.B.c.b #13	ENSGT00940000164766	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001	ENSGT00940000155109.b
koala	MODERN SPECIES	71	MYPN (ENSPCIG00000014477) #9	HERC4 (ENSPCIG00000014626) #10	SIRT1 (ENSPCIG00000014645) #11	DNAJC12 (ENSPCIG00000014649) #12	ENSPCIG00000014652 #13	ENSPCIG00000014654 #13	ENSPCIG00000014661	LRRTM3 (ENSPCIG00000014667) #14	ENSPCIG00000012478 #13	ENSPCIG00000011752	ENSPCIG00000034067	ENSPCIG00000002298	REEP3 (ENSPCIG00000030564) #18	JMJD1C (ENSPCIG00000026465) #19	NRBF2 (ENSPCIG00000034827) #21	EGR2 (ENSPCIG00000035473) #22	ZNF365 (ENSPCIG00000025605) #25	RTKN2 (ENSPCIG00000025606) #26	ARID5B (ENSPCIG00000025607) #27	CABCOCO1 (ENSPCIG00000032237) #28	TMEM26 (ENSPCIG00000025611) #29	ENSPCIG00000032607	RHOBTB1 (ENSPCIG00000027907) #30	CDK1 (ENSPCIG00000021421) #31	ANK3 (ENSPCIG00000021429) #32	CCDC6 (ENSPCIG00000021434) #34	ENSPCIG00000007671	SLC16A9 (ENSPCIG00000021437) #36	FAM13C (ENSPCIG00000028864) #37	PHYHIPL (ENSPCIG00000028865)	BICC1 (ENSPCIG00000028868)
Common wonbat	MODERN SPECIES	1075	MYPN (ENSVURG00010015407) #9	HERC4 (ENSVURG00010015476) #10	SIRT1 (ENSVURG00010015544) #11	DNAJC12 (ENSVURG00010015553) #12	ENSVURG00010015578 #13	ENSVURG00010015583	LRRTM3 (ENSVURG00010015587) #14	CTNNA3 (ENSVURG00010015604) #13	ENSVURG00010015614	ENSVURG00010015619	ENSVURG00010015623	ENSVURG00010015631	REEP3 (ENSVURG00010015640) #18	JMJD1C (ENSVURG00010015644) #19	NRBF2 (ENSVURG00010000410) #21	EGR2 (ENSVURG00010000442) #22	ZNF365 (ENSVURG00010000523) #25	ARID5B (ENSVURG00010000558) #27	ENSVURG00010000589 #28	TMEM26 (ENSVURG00010000683) #29	RHOBTB1 (ENSVURG00010000718) #30	ENSVURG00010000744 #31	ENSVURG00010000815	ENSVURG00010000893 #32	CCDC6 (ENSVURG00010001224) #34	ENSVURG00010001252	SLC16A9 (ENSVURG00010001287) #36	FAM13C (ENSVURG00010001311) #37	PHYHIPL (ENSVURG00010001339)	BICC1 (ENSVURG00010001371)	ENSVURG00010001440
Tasmanian devil	MODERN SPECIES	1	HNRNPH3 (ENSSHAG00000010909)	ENSSHAG00000025918	PBLD (ENSSHAG00000011060) #7	ATOH7 (ENSSHAG00000027967) #8	MYPN (ENSSHAG00000011513) #9	HERC4 (ENSSHAG00000012243) #10	SIRT1 (ENSSHAG00000012695) #11	ENSSHAG00000012965 #12	ENSSHAG00000024951 #13	ENSSHAG00000030888 #13	LRRTM3 (ENSSHAG00000011438) #14	ENSSHAG00000001621	REEP3 (ENSSHAG00000026413) #18	JMJD1C (ENSSHAG00000003458) #19	NRBF2 (ENSSHAG00000004744) #21	EGR2 (ENSSHAG00000020761) #22	ADO (ENSSHAG00000030964) #23	ZNF365 (ENSSHAG00000010650) #25	RTKN2 (ENSSHAG00000011431) #26	ARID5B (ENSSHAG00000012252) #27	ENSSHAG00000030950 #28	TMEM26 (ENSSHAG00000021348) #29	RHOBTB1 (ENSSHAG00000016863) #30	CDK1 (ENSSHAG00000017093) #31	ANK3 (ENSSHAG00000031496) #32	CCDC6 (ENSSHAG00000018251) #34	ENSSHAG00000028162 #36	FAM13C (ENSSHAG00000029279) #37	PHYHIPL (ENSSHAG00000025753)	BICC1 (ENSSHAG00000011416)	ENSSHAG00000027150
Opossum	MODERN SPECIES		MYPN (ENSMODG00000017275) #9	HERC4 (ENSMODG00000017265) #10	ENSMODG00000017248	DNAJC12 (ENSMODG00000017247) #12	ENSMODG00000025145 #13	ENSMODG00000048213	ENSMODG00000050978 #13	LRRTM3 (ENSMODG00000017246) #14	ENSMODG00000044131 #13	ENSMODG00000017233 #13	ENSMODG00000050254	ENSMODG00000029083	REEP3 (ENSMODG00000017199) #18	JMJD1C (ENSMODG00000017196) #19	NRBF2 (ENSMODG00000017183) #21	EGR2 (ENSMODG00000017110) #22	ADO (ENSMODG00000017108) #23	ZNF365 (ENSMODG00000017107) #25	RTKN2 (ENSMODG00000017104) #26	ARID5B (ENSMODG00000017102) #27	ENSMODG00000017099	TMEM26 (ENSMODG00000048319) #29	ENSMODG00000017097 #30	ENSMODG00000017091 #31	ENSMODG00000040895 #32	ENSMODG00000017079 #32	ENSMODG00000017019 #34	ENSMODG00000016588	NKX1-2 (ENSMODG00000048109)	OAT (ENSMODG00000016579)	ENSMODG00000049095
Platypus	MODERN SPECIES	14	HMGCS1 (ENSOANG00000048390)	ENSOANG00000004949	ZNF131 (ENSOANG00000046442)	MYPN (ENSOANG00000004617) #9	HERC4 (ENSOANG00000004618) #10	ENSOANG00000045162	SIRT1 (ENSOANG00000050156) #11	DNAJC12 (ENSOANG00000012157) #12	ENSOANG00000029489 #13	LRRTM3 (ENSOANG00000005626) #14	ENSOANG00000049159 #13	ENSOANG00000011978	REEP3 (ENSOANG00000044147) #18	JMJD1C (ENSOANG00000015266) #19	NRBF2 (ENSOANG00000015265) #21	EGR2 (ENSOANG00000050139) #22	ADO (ENSOANG00000015264) #23	ZNF365 (ENSOANG00000015263) #25	RTKN2 (ENSOANG00000015262) #26	ARID5B (ENSOANG00000015260) #27	CABCOCO1 (ENSOANG00000021714) #28	TMEM26 (ENSOANG00000004417) #29	RHOBTB1 (ENSOANG00000004414) #30	CDK1 (ENSOANG00000004413) #31	ANK3 (ENSOANG00000013055) #32	CCDC6 (ENSOANG00000050638) #34	SLC16A9 (ENSOANG00000005372) #36	FAM13C (ENSOANG00000015055) #37	PHYHIPL (ENSOANG00000048934)	ENSOANG00000049268	BICC1 (ENSOANG00000013223)
Sauria	ANCESTRAL SPECIES	8	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00390000011010.a.b	ENSGT00940000157514.b	ENSGT00940000159378 #12	ENSGT01030000234543.B.g.a #13	ENSGT00940000160543 #14	ENSGT00940000182429	ENSGT01030000234543.B.h #13	ENSGT00940000164766	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00940000170166	ENSGT00940000165236	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00940000165908	ENSGT00950000183033.a.a.d #37
Archelosauria	ANCESTRAL SPECIES	10	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00390000011010.a.b	ENSGT00940000157514.b	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.g.a #13	ENSGT00940000160543 #14	ENSGT00940000164766	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00940000170166	ENSGT00940000165236	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00940000165908	ENSGT00950000183033.a.a.d #37
Archosauria	ANCESTRAL SPECIES	7	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.g.a #13	ENSGT00940000160543 #14	ENSGT00940000164766	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00940000170166	ENSGT00940000165236	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00940000165908	ENSGT00950000183033.a.a.d #37
Aves	ANCESTRAL SPECIES	6	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.g.a #13	ENSGT00940000160543 #14	ENSGT00940000164766	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00940000165236	ENSGT00940000170166	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00940000165908	ENSGT00950000183033.a.a.d #37
Neognathae	ANCESTRAL SPECIES	7	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.g.a #13	ENSGT00940000160543 #14	ENSGT00940000164766	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00940000165236	ENSGT00940000170166	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00940000165908	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b
Galloanserae	ANCESTRAL SPECIES	6	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.g.a #13	ENSGT00940000160543 #14	ENSGT00940000164766	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00940000165236	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00940000165908	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276
Phasianidae	ANCESTRAL SPECIES	6	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.g.a #13	ENSGT00940000160543 #14	ENSGT00940000164766	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078.e #27	ENSGT00940000165236	ENSGT00390000014794.b #29	ENSGT00940000159995.v #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00390000007586.a.a
Phasianidae_b	ANCESTRAL SPECIES	6	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.g.a #13	ENSGT00940000160543 #14	ENSGT00940000164766	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078.e #27	ENSGT00940000165236	ENSGT00390000014794.b #29	ENSGT00940000159995.v #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416.f #36	ENSGT00950000183033.b ##37	ENSGT00940000156416.e #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b
Chicken	MODERN SPECIES	35	FAM149B1 (ENSGALG00010009000)	DNAJC9 (ENSGALG00010009016)	TFAM (ENSGALG00010009043)	UBE2D1 (ENSGALG00010009086)	CISD1 (ENSGALG00010009119)	IPMK (ENSGALG00010009137)	PCDH15 (ENSGALG00010009210)	SIRT1 (ENSGALG00010009252) #11	DNAJC12 (ENSGALG00010009258) #12	CTNNA3 (ENSGALG00010009297) #13	LRRTM3 (ENSGALG00010009317) #14	ENSGALG00010009328	REEP3 (ENSGALG00010009359) #18	JMJD1C (ENSGALG00010009410) #19	NRBF2 (ENSGALG00010009462) #21	KROX20 (ENSGALG00010009467) #22	ADO (ENSGALG00010009472) #23	ZNF365 (ENSGALG00010009477) #25	RTKN2 (ENSGALG00010009484) #26	ARID5B (ENSGALG00010009502) #27	ENSGALG00010009527	TMEM26 (ENSGALG00010009558) #29	RHOBTB1 (ENSGALG00010009575) #30	CDK1 (ENSGALG00010009597) #31	ANK3 (ENSGALG00010009679) #32	CCDC6 (ENSGALG00010008656) #34	SLC16A9 (ENSGALG00010008666) #36	ENSGALG00010008686 ##37	BKJ (ENSGALG00010011147)	BKJ (ENSGALG00010008607)	BKJ (ENSGALG00010008423)
Japanese quail	MODERN SPECIES	24	DNA2 (ENSCJPG00005002203)	RUFY2 (ENSCJPG00005001774)	HNRNPH3 (ENSCJPG00005001763)	PBLD (ENSCJPG00005001759) #7	ATOH7 (ENSCJPG00005001755) #8	MYPN (ENSCJPG00005001273) #9	HERC4 (ENSCJPG00005001237) #10	SIRT1 (ENSCJPG00005001228) #11	DNAJC12 (ENSCJPG00005001223) #12	LRRTM3 (ENSCJPG00005001220) #14	CTNNA3 (ENSCJPG00005000167) #13	ENSCJPG00005015912	REEP3 (ENSCJPG00005015911) #18	JMJD1C (ENSCJPG00005015908) #19	NRBF2 (ENSCJPG00005015906) #21	EGR2 (ENSCJPG00005015880) #22	ADO (ENSCJPG00005015873) #23	ZNF365 (ENSCJPG00005015871) #25	RTKN2 (ENSCJPG00005015869) #26	ENSCJPG00005015868	ARID5B (ENSCJPG00005015865) #27	ENSCJPG00005015856	TMEM26 (ENSCJPG00005015854) #29	RHOBTB1 (ENSCJPG00005015711) #30	CDK1 (ENSCJPG00005015708) #31	ANK3 (ENSCJPG00005013200) #32	CCDC6 (ENSCJPG00005013173) #34	SLC16A9 (ENSCJPG00005013172) #36	ENSCJPG00005013171	ENSCJPG00005013170	ENSCJPG00005013169
Anatidae	ANCESTRAL SPECIES	4	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.g.a #13	ENSGT00940000160543 #14	ENSGT00940000164766	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00940000165236	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00940000165908	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276
Pink-footed goose	MODERN SPECIES	19									ENSABRG00000020560 #13	LRRTM3 (ENSABRG00000020567) #14	ENSABRG00000020572 #13	ENSABRG00000020597	REEP3 (ENSABRG00000020632) #18	JMJD1C (ENSABRG00000020646) #19	NRBF2 (ENSABRG00000020703) #21	EGR2 (ENSABRG00000020724) #22	ADO (ENSABRG00000020770) #23	ZNF365 (ENSABRG00000020773) #25	RTKN2 (ENSABRG00000020781) #26	ARID5B (ENSABRG00000020786) #27	ENSABRG00000020789	ENSABRG00000020790 #29	ENSABRG00000020791 #29	RHOBTB1 (ENSABRG00000020793) #30	CDK1 (ENSABRG00000020817) #31	ANK3 (ENSABRG00000021305) #32	CCDC6 (ENSABRG00000022191) #34	SLC16A9 (ENSABRG00000022195) #36	ENSABRG00000022196	FAM13C (ENSABRG00000022199) #37	PHYHIPL (ENSABRG00000022205)
Neognathae_b	ANCESTRAL SPECIES	8	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.g.a #13	ENSGT00940000160543 #14	ENSGT00940000164766	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00940000165236	ENSGT00940000170166	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00940000165908	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b
Passeriformes	ANCESTRAL SPECIES	10													ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00940000165236	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00940000165908	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276
Great tit	MODERN SPECIES	26	RNLS (ENSPMJG00000015379)	ENSPMJG00000015381	ATAD1 (ENSPMJG00000015382)	PAPSS2 (ENSPMJG00000015383)	MINPP1 (ENSPMJG00000015384)	SGMS1 (ENSPMJG00000015386)	ENSPMJG00000015387	A1CF (ENSPMJG00000015388)	PRKG1 (ENSPMJG00000015389)	ENSPMJG00000015390	DKK1 (ENSPMJG00000015391)	PCDH15 (ENSPMJG00000015392)	REEP3 (ENSPMJG00000015397) #18	JMJD1C (ENSPMJG00000015398) #19	NRBF2 (ENSPMJG00000015399) #21	EGR2 (ENSPMJG00000015401) #22	ADO (ENSPMJG00000015402) #23	ZNF365 (ENSPMJG00000015404) #25	RTKN2 (ENSPMJG00000015405) #26	ARID5B (ENSPMJG00000015406) #27	ENSPMJG00000015412	TMEM26 (ENSPMJG00000015414) #29	RHOBTB1 (ENSPMJG00000015418) #30	CDK1 (ENSPMJG00000015419) #31	ANK3 (ENSPMJG00000015421) #32	CCDC6 (ENSPMJG00000015422) #34	SLC16A9 (ENSPMJG00000015424) #36	FAM13C (ENSPMJG00000015425) #37	PHYHIPL (ENSPMJG00000015426)	BICC1 (ENSPMJG00000015427)	ENSPMJG00000015428
Passeriformes_d	ANCESTRAL SPECIES	7	ENSGT00390000009613.a	ENSGT00390000018409	ENSGT00940000158306	ENSGT00390000015792	ENSGT00940000158678	ENSGT00940000154704.d	ENSGT00940000161319	ENSGT00940000156675	ENSGT00940000155309	ENSGT00940000154445	ENSGT00940000155109.b	ENSGT00440000039001	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00940000165236	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00940000165908	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276
Flycatcher	MODERN SPECIES	25	ENSFALG00000013133	ENSFALG00000013155	A1CF (ENSFALG00000013183)	PRKG1 (ENSFALG00000013186)	ENSFALG00000023365	DKK1 (ENSFALG00000013191)	PCDH15 (ENSFALG00000013208)	ENSFALG00000026261	ENSFALG00000023132	IPMK (ENSFALG00000028891)	ENSFALG00000013250	ENSFALG00000026776	REEP3 (ENSFALG00000013264) #18	JMJD1C (ENSFALG00000013267) #19	NRBF2 (ENSFALG00000025961) #21	EGR2 (ENSFALG00000013277) #22	ADO (ENSFALG00000026091) #23	ZNF365 (ENSFALG00000013284) #25	RTKN2 (ENSFALG00000028181) #26	ARID5B (ENSFALG00000027152) #27	ENSFALG00000013307	TMEM26 (ENSFALG00000013309) #29	RHOBTB1 (ENSFALG00000013316) #30	CDK1 (ENSFALG00000013320) #31	ANK3 (ENSFALG00000013352) #32	CCDC6 (ENSFALG00000002256) #34	SLC16A9 (ENSFALG00000002254) #36	ENSFALG00000002252	FAM13C (ENSFALG00000002251) #37	PHYHIPL (ENSFALG00000023335)	BICC1 (ENSFALG00000002247)
Passeriformes_g	ANCESTRAL SPECIES	8	ENSGT00390000009613.a	ENSGT00390000018409	ENSGT00940000158306	ENSGT00390000015792	ENSGT00940000158678	ENSGT00940000154704.d	ENSGT00940000161319	ENSGT00940000156675	ENSGT00940000155309	ENSGT00940000154445	ENSGT00940000155109.b	ENSGT00440000039001	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00940000165236	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00940000165908	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276
Passeroidea	ANCESTRAL SPECIES	7	ENSGT00390000018409	ENSGT00940000158306	ENSGT00390000015792	ENSGT00940000158678	ENSGT00390000004632	ENSGT00940000154704.d	ENSGT00940000161319	ENSGT00940000156675	ENSGT00940000155309	ENSGT00940000154445	ENSGT00940000155109.b	ENSGT00440000039001	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00940000165236	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00940000165908	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276
Zebra finch	MODERN SPECIES	28	SGMS1 (ENSTGUG00000005065)	ENSTGUG00000005068	A1CF (ENSTGUG00000005090)	ENSTGUG00000025977	PRKG1 (ENSTGUG00000025160)	DKK1 (ENSTGUG00000024055)	ENSTGUG00000027440	PCDH15 (ENSTGUG00000016392)	IPMK (ENSTGUG00000019280)	CISD1 (ENSTGUG00000022153)	UBE2D1 (ENSTGUG00000005149)	ENSTGUG00000005161	REEP3 (ENSTGUG00000005188) #18	JMJD1C (ENSTGUG00000005207) #19	NRBF2 (ENSTGUG00000024274) #21	EGR2 (ENSTGUG00000026762) #22	ADO (ENSTGUG00000026135) #23	RTKN2 (ENSTGUG00000005245) #26	ZNF365 (ENSTGUG00000005236) #25	ARID5B (ENSTGUG00000005270) #27	ENSTGUG00000021280	TMEM26 (ENSTGUG00000022288) #29	RHOBTB1 (ENSTGUG00000005309) #30	CDK1 (ENSTGUG00000005332) #31	ANK3 (ENSTGUG00000005344) #32	CCDC6 (ENSTGUG00000005517) #34	SLC16A9 (ENSTGUG00000005527) #36	FAM13C (ENSTGUG00000005544) #37	PHYHIPL (ENSTGUG00000005576)	BICC1 (ENSTGUG00000005584)	ENSTGUG00000026694
Neognathae_c	ANCESTRAL SPECIES	8	ENSGT00780000122010	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT01030000234543.B.g.a #13	ENSGT00940000160543 #14	ENSGT00940000164766	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00940000165236	ENSGT00940000170166	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00940000165908	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b
Kakapo	MODERN SPECIES	22	DNA2 (ENSSHBG00005010489)	RUFY2 (ENSSHBG00005010445)	HNRNPH3 (ENSSHBG00005010407)	PBLD (ENSSHBG00005010373) #7	MYPN (ENSSHBG00005010291) #9	HERC4 (ENSSHBG00005010119) #10	SIRT1 (ENSSHBG00005010069) #11	DNAJC12 (ENSSHBG00005010046) #12	ENSSHBG00005000205 #13	LRRTM3 (ENSSHBG00005009726) #14	ENSSHBG00005009697 #13	ENSSHBG00005009682	REEP3 (ENSSHBG00005009676) #18	JMJD1C (ENSSHBG00005009650) #19	NRBF2 (ENSSHBG00005009634) #21	EGR2 (ENSSHBG00005009623) #22	ADO (ENSSHBG00005009611) #23	ZNF365 (ENSSHBG00005009587) #25	RTKN2 (ENSSHBG00005009579) #26	ARID5B (ENSSHBG00005009568) #27	ENSSHBG00005009537	ENSSHBG00005009519	TMEM26 (ENSSHBG00005009506) #29	RHOBTB1 (ENSSHBG00005009490) #30	CDK1 (ENSSHBG00005009473) #31	ENSSHBG00005009438 #32	ENSSHBG00005009384 #32	CCDC6 (ENSSHBG00005009374) #34	SLC16A9 (ENSSHBG00005009362) #36	ENSSHBG00005009350	FAM13C (ENSSHBG00005009336) #37
Golden eagle	MODERN SPECIES	2	ENSACCG00020002578	PAOX (ENSACCG00020002521)	MTG1 (ENSACCG00020002479)	ECHS1 (ENSACCG00020002462)	ZNF511 (ENSACCG00020002440)	TUBGCP2 (ENSACCG00020002409)	ADAM8 (ENSACCG00020002376)	ERLIN1 (ENSACCG00020002355)	CHUK (ENSACCG00020002332)	CWF19L1 (ENSACCG00020002305)	ENSACCG00020002282	ENSACCG00020002268	REEP3 (ENSACCG00020002246) #18	JMJD1C (ENSACCG00020002211) #19	NRBF2 (ENSACCG00020002162) #21	EGR2 (ENSACCG00020002127) #22	ADO (ENSACCG00020002112) #23	ZNF365 (ENSACCG00020002083) #25	RTKN2 (ENSACCG00020002070) #26	ARID5B (ENSACCG00020002031) #27	ENSACCG00020001987	ENSACCG00020001970	TMEM26 (ENSACCG00020001957) #29	RHOBTB1 (ENSACCG00020001933) #30	CDK1 (ENSACCG00020001913) #31	ANK3 (ENSACCG00020001733) #32	CCDC6 (ENSACCG00020001637) #34	SLC16A9 (ENSACCG00020001608) #36	ENSACCG00020001594	FAM13C (ENSACCG00020001578) #37	PHYHIPL (ENSACCG00020001564)
Australian saltwater crocodile	MODERN SPECIES	39	HNRNPH3 (ENSCPRG00005006263)	RUFY2 (ENSCPRG00005006212)	ATOH7 (ENSCPRG00005006200) #8	MYPN (ENSCPRG00005006182) #9	HERC4 (ENSCPRG00005006164) #10	ENSCPRG00005006157	DNAJC12 (ENSCPRG00005006152) #12	ENSCPRG00005006147	ENSCPRG00005006138 #13	LRRTM3 (ENSCPRG00005006135) #14	ENSCPRG00005006122 #13	ENSCPRG00005006063	JMJD1C (ENSCPRG00005006046) #19	NRBF2 (ENSCPRG00005006040) #21	ENSCPRG00005006036	EGR2 (ENSCPRG00005006033) #22	ADO (ENSCPRG00005006029) #23	ENSCPRG00005006017	ZNF365 (ENSCPRG00005005999) #25	ENSCPRG00005005994
Cryptodira	ANCESTRAL SPECIES	6	ENSGT00940000157720	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00390000011010.a.b	ENSGT00940000157514.b	ENSGT00940000159378 #12	ENSGT01030000234543.B.h #13	ENSGT01030000234543.B.g.b #13	ENSGT00940000160543 #14	ENSGT01030000234543.B.g.a.a #13	ENSGT00940000164766	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d.l #37	ENSGT00950000183033.a.a.d.k #37	ENSGT00390000014563.a.b	ENSGT00940000156276
Testudinoidea	ANCESTRAL SPECIES	2	ENSGT00940000155595	ENSGT00940000157720	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00390000011010.a.b	ENSGT00940000157514.b	ENSGT00940000159378 #12	ENSGT01030000234543.B.g.b #13	ENSGT00940000160543 #14	ENSGT01030000234543.B.g.a.a #13	ENSGT00940000164766	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d.l #37	ENSGT00950000183033.a.a.d.k #37	ENSGT00390000014563.a.b	ENSGT00940000156276
Testudinidae	ANCESTRAL SPECIES	9	ENSGT00940000155595	ENSGT00940000157720	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00390000011010.a.b	ENSGT00940000157514.b	ENSGT00940000159378 #12	ENSGT01030000234543.B.g.b #13	ENSGT00940000160543 #14	ENSGT01030000234543.B.g.a.a #13	ENSGT00940000164766	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d.l #37	ENSGT00950000183033.a.a.d.k #37	ENSGT00390000014563.a.b	ENSGT00940000156276
Goode s thornscrub tortoise	MODERN SPECIES	21	HNRNPH3 (ENSGEVG00005010551)	ATOH7 (ENSGEVG00005010598) #8	MYPN (ENSGEVG00005010658) #9	HERC4 (ENSGEVG00005010906) #10	ENSGEVG00005011029	ENSGEVG00005011053	DNAJC12 (ENSGEVG00005011087) #12	ENSGEVG00005011125 #13	LRRTM3 (ENSGEVG00005011220) #14	ENSGEVG00005011266 #13	ENSGEVG00005011362	ENSGEVG00005011422	REEP3 (ENSGEVG00005011457) #18	JMJD1C (ENSGEVG00005011534) #19	NRBF2 (ENSGEVG00005011669) #21	EGR2 (ENSGEVG00005011689) #22	ADO (ENSGEVG00005011720) #23	ZNF365 (ENSGEVG00005011767) #25	RTKN2 (ENSGEVG00005012098) #26	ENSGEVG00005013407 #27	ENSGEVG00005013520 #27	CABCOCO1 (ENSGEVG00005013612) #28	ENSGEVG00005013885 #29	ENSGEVG00005013906 #29	ENSGEVG00005013953 #30	ENSGEVG00005013978 #30	CDK1 (ENSGEVG00005014068) #31	ENSGEVG00005014100 #32	ENSGEVG00005014449 #32	CCDC6 (ENSGEVG00005015749) #34	SLC16A9 (ENSGEVG00005015777) #36
Abingdon island giant tortoise	MODERN SPECIES	465												ENSCABG00000008368	REEP3 (ENSCABG00000008369) #18	JMJD1C (ENSCABG00000008381) #19	NRBF2 (ENSCABG00000008653) #21	EGR2 (ENSCABG00000008657) #22	ZNF365 (ENSCABG00000008658) #25
Emydidae	ANCESTRAL SPECIES	6	ENSGT00940000157720	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00390000011010.a.b	ENSGT00940000157514.b	ENSGT00940000159378 #12	ENSGT01030000234543.B.h #13	ENSGT01030000234543.B.g.b #13	ENSGT00940000160543 #14	ENSGT01030000234543.B.g.a.a #13	ENSGT00940000164766	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d.l #37	ENSGT00950000183033.a.a.d.k #37	ENSGT00390000014563.a.b	ENSGT00940000156276
Three-toed box turtle	MODERN SPECIES	39	ATOH7 (ENSTMTG00000007151) #8	MYPN (ENSTMTG00000007170) #9	HERC4 (ENSTMTG00000007331) #10	ENSTMTG00000007890	ENSTMTG00000007925	ENSTMTG00000007944	ENSTMTG00000007960 #13	LRRTM3 (ENSTMTG00000007977) #14	ENSTMTG00000007995 #13	ENSTMTG00000008018	ENSTMTG00000008029	ENSTMTG00000008045	REEP3 (ENSTMTG00000008080) #18	JMJD1C (ENSTMTG00000008102) #19	NRBF2 (ENSTMTG00000008149) #21	EGR2 (ENSTMTG00000008155) #22	ADO (ENSTMTG00000008170) #23	ZNF365 (ENSTMTG00000008181) #25	RTKN2 (ENSTMTG00000008200) #26	ARID5B (ENSTMTG00000008224) #27	CABCOCO1 (ENSTMTG00000008265) #28	ENSTMTG00000008291 #29	ENSTMTG00000000049 #29	RHOBTB1 (ENSTMTG00000000075) #30	CDK1 (ENSTMTG00000000127) #31	ANK3 (ENSTMTG00000000197) #32	CCDC6 (ENSTMTG00000000313) #34	SLC16A9 (ENSTMTG00000000350) #36	ENSTMTG00000000371 #37	FAM13C (ENSTMTG00000000492) #37	PHYHIPL (ENSTMTG00000000781)
painted turtle	MODERN SPECIES	2401											ENSCPBG00000015451	ENSCPBG00000015449	REEP3 (ENSCPBG00000015445) #18	JMJD1C (ENSCPBG00000015439) #19	NRBF2 (ENSCPBG00000015433) #21	EGR2 (ENSCPBG00000015431) #22	ADO (ENSCPBG00000015428) #23	ZNF365 (ENSCPBG00000015425) #25	RTKN2 (ENSCPBG00000015422) #26	ARID5B (ENSCPBG00000015418) #27	ENSCPBG00000012850 #32	ENSCPBG00000006265 #32	CCDC6 (ENSCPBG00000005918) #34	SLC16A9 (ENSCPBG00000005904) #36	FAM13C (ENSCPBG00000005862) #37	PHYHIPL (ENSCPBG00000005838)	BICC1 (ENSCPBG00000005820)	ENSCPBG00000005808	CCSER2 (ENSCPBG00000005786)	ENSCPBG00000005766
Chinese turtle	MODERN SPECIES	123														JMJD1C (ENSPSIG00000009262) #19	NRBF2 (ENSPSIG00000007829) #21	EGR2 (ENSPSIG00000007627) #22
Lepidosauria	ANCESTRAL SPECIES	8	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00390000011010.a.b	ENSGT00940000157514.b	ENSGT00940000159378 #12	ENSGT01030000234543.B.h #13	ENSGT00940000160543 #14	ENSGT00940000164766	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00940000170166	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00940000165908	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b
Episquamata	ANCESTRAL SPECIES	2	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00390000011010.a.b	ENSGT00940000157514.b	ENSGT00940000159378 #12	ENSGT00940000160543 #14	ENSGT01030000234543.B.h #13	ENSGT00940000164766	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00940000170166	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00940000165908	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b
Laterata	ANCESTRAL SPECIES		ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00390000011010.a.b	ENSGT00940000157514.b	ENSGT00940000159406 #11	ENSGT00940000159378 #12	ENSGT00940000160543 #14	ENSGT01030000234543.B.h #13	ENSGT00940000164766	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00940000165908	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276
Argentine black and white tegu	MODERN SPECIES	69									ENSSMRG00000016609	ENSSMRG00000016606 #13	ENSSMRG00000016603	ENSSMRG00000016602	REEP3 (ENSSMRG00000016601) #18	JMJD1C (ENSSMRG00000016465) #19	NRBF2 (ENSSMRG00000016464) #21	EGR2 (ENSSMRG00000016463) #22	ADO (ENSSMRG00000016462) #23	ZNF365 (ENSSMRG00000016461) #25	RTKN2 (ENSSMRG00000016460) #26	ENSSMRG00000016459	ARID5B (ENSSMRG00000016458) #27	CABCOCO1 (ENSSMRG00000016455) #28	TMEM26 (ENSSMRG00000016453) #29	RHOBTB1 (ENSSMRG00000016450) #30	CDK1 (ENSSMRG00000016447) #31	ANK3 (ENSSMRG00000016433) #32	CCDC6 (ENSSMRG00000016432) #34	SLC16A9 (ENSSMRG00000016430) #36	ENSSMRG00000016429	FAM13C (ENSSMRG00000016428) #37	PHYHIPL (ENSSMRG00000016427)
Common wall lizard	MODERN SPECIES	13	RUFY2 (ENSPMRG00000010208)	HNRNPH3 (ENSPMRG00000010199)	PBLD (ENSPMRG00000010194) #7	ATOH7 (ENSPMRG00000010191) #8	MYPN (ENSPMRG00000010169) #9	HERC4 (ENSPMRG00000010138) #10	SIRT1 (ENSPMRG00000010129) #11	DNAJC12 (ENSPMRG00000010125) #12	ENSPMRG00000010124	LRRTM3 (ENSPMRG00000010122) #14	CTNNA3 (ENSPMRG00000010117) #13	ENSPMRG00000010110	REEP3 (ENSPMRG00000010098) #18	JMJD1C (ENSPMRG00000010089) #19	NRBF2 (ENSPMRG00000010083) #21	EGR2 (ENSPMRG00000010081) #22	ENSPMRG00000010080	ADO (ENSPMRG00000010077) #23	ZNF365 (ENSPMRG00000010071) #25	RTKN2 (ENSPMRG00000010055) #26	ENSPMRG00000010045	ENSPMRG00000010041	ARID5B (ENSPMRG00000010030) #27	CABCOCO1 (ENSPMRG00000010007) #28	TMEM26 (ENSPMRG00000009993) #29	RHOBTB1 (ENSPMRG00000009976) #30	CDK1 (ENSPMRG00000009961) #31	ANK3 (ENSPMRG00000007114) #32	CCDC6 (ENSPMRG00000006572) #34	ENSPMRG00000006563 #36	ENSPMRG00000006559 ##37
Toxicofera	ANCESTRAL SPECIES	2	ENSGT00940000157720	ENSGT00390000017595 #7	ENSGT00940000161556 #8	ENSGT00940000153441.a.b #9	ENSGT00940000158924 #10	ENSGT00390000011010.a.b	ENSGT00940000157514.b	ENSGT00940000159378 #12	ENSGT00940000158686	ENSGT01030000234543.B.h #13	ENSGT00940000160543 #14	ENSGT00940000164766	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00390000004181 #28	ENSGT00940000170166	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00940000165908	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b
Lizard	MODERN SPECIES	818	NRAP (ENSACAG00000010135)	HABP2 (ENSACAG00000010352)	ENSACAG00000010433	ENSACAG00000037969	ZDHHC6 (ENSACAG00000009483)	ACSL5 (ENSACAG00000009489)	ENSACAG00000009932	TECTB (ENSACAG00000009978)	GPAM (ENSACAG00000010027)	ENSACAG00000010180	ENSACAG00000034869	ENSACAG00000010199 #18	JMJD1C (ENSACAG00000010214) #19	ENSACAG00000039581	NRBF2 (ENSACAG00000010317) #21	EGR2 (ENSACAG00000010340) #22	ZNF365 (ENSACAG00000010813) #25	RTKN2 (ENSACAG00000010851) #26	ARID5B (ENSACAG00000010922) #27	ENSACAG00000043544	CABCOCO1 (ENSACAG00000010976) #28	TMEM26 (ENSACAG00000036584) #29	RHOBTB1 (ENSACAG00000011020) #30	CDK1 (ENSACAG00000011086) #31
Elapidae	ANCESTRAL SPECIES	4	ENSGT00940000165908	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00390000007586.a.a	ENSGT00940000153912.A.i	ENSGT00940000155910.o.a	ENSGT00390000015768	ENSGT00940000154877.C	ENSGT00940000154877.A	ENSGT00940000156225	ENSGT01030000234633.C.a	ENSGT00950000183175.A	ENSGT00390000000854.c.b	ENSGT00390000003133	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000164426	ENSGT01030000234543.D.b ##13	ENSGT00940000158184	ENSGT00390000014320	ENSGT00940000157372.f	ENSGT00940000160190	ENSGT00940000154628.B	ENSGT00940000162682.A.a.b	ENSGT00940000155540.b.b	ENSGT00950000182869.e.a.a	ENSGT00390000004409	ENSGT00390000014618.a
Elapidae_a	ANCESTRAL SPECIES	295																ENSGT00940000158394 #22	ENSGT00390000014082.b #23
Acanthophiinae	ANCESTRAL SPECIES	282																ENSGT00940000158394 #22	ENSGT00390000014082.b #23
Mainland tiger snake	DUPLICATION
Mainland tiger snake	MODERN SPECIES	906																ENSNSUG00000006390 #22	ENSNSUG00000006389 #23
Mainland tiger snake	MODERN SPECIES	907																ENSNSUG00000006403 #22	ENSNSUG00000006402 #23
Eastern brown snake	DUPLICATION
Eastern brown snake	MODERN SPECIES	1020																ENSPTXG00000016081 #22
Eastern brown snake	MODERN SPECIES	1019																ENSPTXG00000016078 #22
Blue-lipped sea krait	MODERN SPECIES	685													HELLS (ENSLLTG00000000508)	BLOC1S2 (ENSLLTG00000000542)	PKD2L1 (ENSLLTG00000000591)	EGR2 (ENSLLTG00000001128) #22
Indian cobra	MODERN SPECIES	3	FAM13C (ENSNNAG00000017954) #37	PHYHIPL (ENSNNAG00000017962)	BICC1 (ENSNNAG00000017967)	ENSNNAG00000017977	CCSER2 (ENSNNAG00000017985)	ENSNNAG00000018008	GRID1 (ENSNNAG00000018016)	WAPL (ENSNNAG00000018052)	ENSNNAG00000018074	ENSNNAG00000018086	BMPR1A (ENSNNAG00000018090)	MMRN2 (ENSNNAG00000003069)	SNCG (ENSNNAG00000003079)	ENSNNAG00000003089	ENSNNAG00000003109	EGR2 (ENSNNAG00000003126) #22	ADO (ENSNNAG00000003138) #23	ZNF365 (ENSNNAG00000003154) #25	RTKN2 (ENSNNAG00000003167) #26	ENSNNAG00000003188	ENSNNAG00000003212 ##13	VCL (ENSNNAG00000003234) ##13	AP3M1 (ENSNNAG00000003266)	ADK (ENSNNAG00000003283)	KAT6B (ENSNNAG00000003335)	DUSP29 (ENSNNAG00000003367)	DUSP13 (ENSNNAG00000003378)	ENSNNAG00000003393	ENSNNAG00000003404	ENSNNAG00000003413	SAMD8 (ENSNNAG00000003418)
Anura	ANCESTRAL SPECIES	66				ENSGT01100000263581.c.b.b.b	ENSGT00730000111328	ENSGT00940000156876	ENSGT00940000155232.b	ENSGT00940000157871	ENSGT00390000009978	ENSGT00940000159340	ENSGT00440000033697	ENSGT01100000263581.c.b.a.a.a	ENSGT00940000158794 #18	ENSGT00940000158210 #19	ENSGT00390000000984 #21	ENSGT00940000158394 #22	ENSGT00390000014082.b #23	ENSGT00530000063713.a #25	ENSGT00940000157470 #26	ENSGT00940000161078 #27	ENSGT00940000165236	ENSGT00390000014794.b #29	ENSGT00940000159995 #30	ENSGT00940000153335.a.b #31	ENSGT00940000154939 #32	ENSGT00390000013594 #34	ENSGT00940000156416 #36	ENSGT00950000183033.a.a.d #37	ENSGT00390000014563.a.b	ENSGT00940000156276	ENSGT00440000039001
Frog	MODERN SPECIES	7	styk1 (ENSXETG00000016240)	syce3 (ENSXETG00000040102)	ybx3 (ENSXETG00000016239)	gstk1 (ENSXETG00000016238)	t2r41 (ENSXETG00000032405)	t2r42 (ENSXETG00000039788)	ENSXETG00000027471	ENSXETG00000042547	ENSXETG00000035920	ENSXETG00000045365	ENSXETG00000049462	ENSXETG00000039162	reep3 (ENSXETG00000007690) #18	jmjd1c (ENSXETG00000007684) #19	nrbf2 (ENSXETG00000007693) #21	egr2 (ENSXETG00000042069) #22	ado (ENSXETG00000047789) #23	znf365 (ENSXETG00000014063) #25	rtkn2 (ENSXETG00000014056) #26	arid5b (ENSXETG00000014055)	cabcoco1 (ENSXETG00000039152) #28	ENSXETG00000042894	ENSXETG00000044360	ENSXETG00000047195	ENSXETG00000046978	ENSXETG00000035334	tmem26 (ENSXETG00000003133) #29	rhobtb1 (ENSXETG00000003124) #30	cdk1 (ENSXETG00000003123) #31	ank3 (ENSXETG00000003121) #32	actrt2 (ENSXETG00000003120)
Leishan spiny toad	MODERN SPECIES	9	ENSLLEG00000030616	ENSLLEG00000030628	GSTK1 (ENSLLEG00000030638)	ENSLLEG00000030650	ENSLLEG00000030653	ENSLLEG00000030659	ENSLLEG00000030666	ENSLLEG00000005308	ENSLLEG00000005330	ENSLLEG00000005362	ENSLLEG00000005434	REEP3 (ENSLLEG00000005528) #18	JMJD1C (ENSLLEG00000005591) #19	ENSLLEG00000005798	NRBF2 (ENSLLEG00000005815) #21	EGR2 (ENSLLEG00000005883) #22	ADO (ENSLLEG00000005930) #23	ENSLLEG00000005939	ZNF365 (ENSLLEG00000005956) #25	ENSLLEG00000006003	RTKN2 (ENSLLEG00000006022) #26	ARID5B (ENSLLEG00000006097) #27	ENSLLEG00000006187	ENSLLEG00000006225	TMEM26 (ENSLLEG00000006300) #29	RHOBTB1 (ENSLLEG00000006347) #30	CDK1 (ENSLLEG00000006500) #31	ANK3 (ENSLLEG00000006837) #32	ENSLLEG00000008016	CCDC6 (ENSLLEG00000008038) #34	ENSLLEG00000008130