Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00940000154860	ENSGT00940000157226 #7	ENSGT00390000016821 #8	ENSGT00940000162841 #9	ENSGT00940000161101 #10	ENSGT00940000156620 #11	ENSGT00940000159662 #12	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #27	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Glires	ANCESTRAL SPECIES	1	ENSGT00940000154860	ENSGT00940000157226 #7	ENSGT00390000016821 #8	ENSGT00940000162841 #9	ENSGT00940000161101 #10	ENSGT00940000156620 #11	ENSGT00940000159662 #12	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #27	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Rodentia	ANCESTRAL SPECIES	1	ENSGT00940000154860	ENSGT00940000157226 #7	ENSGT00390000016821 #8	ENSGT00940000162841 #9	ENSGT00940000161101 #10	ENSGT00940000156620 #11	ENSGT00940000159662 #12	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT01100000264486	ENSGT00940000159848 #27	ENSGT00860000136066	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00940000154860	ENSGT00940000157226 #7	ENSGT00390000016821 #8	ENSGT00940000162841 #9	ENSGT00940000161101 #10	ENSGT00940000156620 #11	ENSGT00940000159662 #12	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #27	ENSGT00860000136066	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062	ENSGT00940000154234.b #36
Sciuridae	ANCESTRAL SPECIES	2	ENSGT00940000154860	ENSGT00940000157226 #7	ENSGT00390000016821 #8	ENSGT00940000162841 #9	ENSGT00940000161101 #10	ENSGT00940000156620 #11	ENSGT00940000159662 #12	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #27	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Eurasian red squirrel	MODERN SPECIES	2	ALKBH3 (ENSSVLG00005018027) #7	C11orf96 (ENSSVLG00005018003) #8	ACCSL (ENSSVLG00005017862) #9	ACCS (ENSSVLG00005017673) #10	EXT2 (ENSSVLG00005017472) #11	ALX4 (ENSSVLG00005017428) #12	ENSSVLG00005017405 #13	CD82 (ENSSVLG00005017346) #14	TSPAN18 (ENSSVLG00005017248) #15	TP53I11 (ENSSVLG00005017174) #16	PRDM11 (ENSSVLG00005017126) #17	SYT13 (ENSSVLG00005017054) #18	CHST1 (ENSSVLG00005017036) #19	SLC35C1 (ENSSVLG00005016968) #20	CRY2 (ENSSVLG00005016727) #21	MAPK8IP1 (ENSSVLG00005016511) #22	FREY1 (ENSSVLG00005016461) #23	PEX16 (ENSSVLG00005016392) #24	LARGE2 (ENSSVLG00005016132) #25	PHF21A (ENSSVLG00005016012) #26	CREB3L1 (ENSSVLG00005015955) #27	ENSSVLG00005015926 #28	DGKZ (ENSSVLG00005015887) #29	MDK (ENSSVLG00005015782) #30	CHRM4 (ENSSVLG00005015740) #31	AMBRA1 (ENSSVLG00005015569) #32	HARBI1 (ENSSVLG00005015510) #33	ENSSVLG00005014869 #34	ARHGAP1 (ENSSVLG00005014685) #35	F2 (ENSSVLG00005014116) #36	CKAP5 (ENSSVLG00005013939) #37
Marmotini	ANCESTRAL SPECIES	22	ENSGT00940000154860	ENSGT00940000157226 #7	ENSGT00390000016821 #8	ENSGT00940000162841 #9	ENSGT00940000161101 #10	ENSGT00940000156620 #11	ENSGT00940000159662 #12	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #27	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Marmotini_b	ANCESTRAL SPECIES	23	ENSGT00940000154860	ENSGT00940000157226 #7	ENSGT00390000016821 #8	ENSGT00940000162841 #9	ENSGT00940000161101 #10	ENSGT00940000156620 #11	ENSGT00940000159662 #12	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #27	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Arctic ground squirrel	MODERN SPECIES	208						EXT2 (ENSUPAG00010008690) #11	ALX4 (ENSUPAG00010008717) #12	CD82 (ENSUPAG00010008728) #14	TSPAN18 (ENSUPAG00010008743) #15	TP53I11 (ENSUPAG00010008764) #16	ENSUPAG00010008787 #17	SYT13 (ENSUPAG00010008795) #18	CHST1 (ENSUPAG00010008807) #19	SLC35C1 (ENSUPAG00010008815) #20	CRY2 (ENSUPAG00010008829) #21	MAPK8IP1 (ENSUPAG00010008856) #22	FREY1 (ENSUPAG00010008915) #23	PEX16 (ENSUPAG00010008926) #24	LARGE2 (ENSUPAG00010008955) #25	PHF21A (ENSUPAG00010009105) #26	CREB3L1 (ENSUPAG00010010194) #27	DGKZ (ENSUPAG00010010211) #29	MDK (ENSUPAG00010010379) #30	CHRM4 (ENSUPAG00010010417) #31	AMBRA1 (ENSUPAG00010010430) #32	HARBI1 (ENSUPAG00010010611) #33	ATG13 (ENSUPAG00010010621) #34	ARHGAP1 (ENSUPAG00010010696) #35	ZNF408 (ENSUPAG00010010704)	F2 (ENSUPAG00010010714) #36	CKAP5 (ENSUPAG00010010730) #37
Squirrel	MODERN SPECIES	162	C11orf96 (ENSSTOG00000030620) #8	ACCSL (ENSSTOG00000001158) #9	ENSSTOG00000033284 #10	ENSSTOG00000004449 #10	EXT2 (ENSSTOG00000004480) #11	ALX4 (ENSSTOG00000029078) #12	ENSSTOG00000023731 #14	TSPAN18 (ENSSTOG00000012343) #15	TP53I11 (ENSSTOG00000025635) #16	PRDM11 (ENSSTOG00000021186) #17	SYT13 (ENSSTOG00000004017) #18	CHST1 (ENSSTOG00000016359) #19	SLC35C1 (ENSSTOG00000022825) #20	CRY2 (ENSSTOG00000011521) #21	FREY1 (ENSSTOG00000027622) #23	MAPK8IP1 (ENSSTOG00000027362) #22	PEX16 (ENSSTOG00000011534) #24	LARGE2 (ENSSTOG00000011545) #25	PHF21A (ENSSTOG00000011552) #26	CREB3L1 (ENSSTOG00000012697) #27	DGKZ (ENSSTOG00000012704) #29	MDK (ENSSTOG00000027636) #30	CHRM4 (ENSSTOG00000022455) #31	AMBRA1 (ENSSTOG00000019411) #32	HARBI1 (ENSSTOG00000005072) #33	ATG13 (ENSSTOG00000005077) #34	ARHGAP1 (ENSSTOG00000026557) #35	ZNF408 (ENSSTOG00000005114)	F2 (ENSSTOG00000005130) #36	CKAP5 (ENSSTOG00000005158) #37	LRP4 (ENSSTOG00000005236)
Alpin marmot	MODERN SPECIES	3	ALKBH3 (ENSMMMG00000011630) #7	C11orf96 (ENSMMMG00000011645) #8	ACCSL (ENSMMMG00000011649) #9	ENSMMMG00000011721	ACCS (ENSMMMG00000011728) #10	EXT2 (ENSMMMG00000011786) #11	ALX4 (ENSMMMG00000011816) #12	ENSMMMG00000011823	TSPAN18 (ENSMMMG00000011835) #15	TP53I11 (ENSMMMG00000011860) #16	PRDM11 (ENSMMMG00000011883) #17	SYT13 (ENSMMMG00000011892) #18	CHST1 (ENSMMMG00000011917) #19	SLC35C1 (ENSMMMG00000011928) #20	CRY2 (ENSMMMG00000011931) #21	MAPK8IP1 (ENSMMMG00000011982) #22	FREY1 (ENSMMMG00000012302) #23	PEX16 (ENSMMMG00000012310) #24	LARGE2 (ENSMMMG00000012317) #25	PHF21A (ENSMMMG00000012404) #26	CREB3L1 (ENSMMMG00000013137) #27	DGKZ (ENSMMMG00000013155) #29	MDK (ENSMMMG00000013259) #30	CHRM4 (ENSMMMG00000013278) #31	AMBRA1 (ENSMMMG00000013284) #32	HARBI1 (ENSMMMG00000013860) #33	ATG13 (ENSMMMG00000013875) #34	ARHGAP1 (ENSMMMG00000013934) #35	ZNF408 (ENSMMMG00000013944)	F2 (ENSMMMG00000013961) #36	CKAP5 (ENSMMMG00000013993) #37
Hystricomorpha	ANCESTRAL SPECIES	16	ENSGT00390000006196	ENSGT00940000154860	ENSGT00940000157226 #7	ENSGT00390000016821 #8	ENSGT00940000161101 #10	ENSGT00940000156620 #11	ENSGT00940000159662 #12	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #27	ENSGT00860000136066	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Hystricomorpha_a	ANCESTRAL SPECIES	12	ENSGT00390000006196	ENSGT00940000154860	ENSGT00940000157226 #7	ENSGT00390000016821 #8	ENSGT00940000161101 #10	ENSGT00940000156620 #11	ENSGT00940000159662 #12	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #27	ENSGT00860000136066	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Hystricomorpha_b	ANCESTRAL SPECIES	10	ENSGT00390000006196	ENSGT00940000154860	ENSGT00940000157226 #7	ENSGT00390000016821 #8	ENSGT00940000161101 #10	ENSGT00940000156620 #11	ENSGT00940000159662 #12	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #27	ENSGT00860000136066	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Long-tailed chinchilla	MODERN SPECIES	129	TTC17 (ENSCLAG00000012857)	HSD17B12 (ENSCLAG00000016216)	ALKBH3 (ENSCLAG00000016579) #7	C11orf96 (ENSCLAG00000018096) #8	EXT2 (ENSCLAG00000014428) #11	ALX4 (ENSCLAG00000013928) #12	CD82 (ENSCLAG00000013557) #14	TSPAN18 (ENSCLAG00000013370) #15	TP53I11 (ENSCLAG00000013412) #16	PRDM11 (ENSCLAG00000015369) #17	SYT13 (ENSCLAG00000014302) #18	CHST1 (ENSCLAG00000013459) #19	SLC35C1 (ENSCLAG00000013258) #20	CRY2 (ENSCLAG00000014719) #21	ENSCLAG00000014881	MAPK8IP1 (ENSCLAG00000014552) #22	PEX16 (ENSCLAG00000013695) #24	LARGE2 (ENSCLAG00000014846) #25	PHF21A (ENSCLAG00000016632) #26	CREB3L1 (ENSCLAG00000013609) #27	ENSCLAG00000014194	DGKZ (ENSCLAG00000016057) #29	MDK (ENSCLAG00000014462) #30	CHRM4 (ENSCLAG00000013251) #31	AMBRA1 (ENSCLAG00000015156) #32	HARBI1 (ENSCLAG00000013578) #33	ATG13 (ENSCLAG00000015328) #34	ARHGAP1 (ENSCLAG00000013542) #35	F2 (ENSCLAG00000015618) #36	CKAP5 (ENSCLAG00000015801) #37	LRP4 (ENSCLAG00000016159)
Degu	MODERN SPECIES	59	ENSODEG00000020538	ACCS (ENSODEG00000016512) #10	EXT2 (ENSODEG00000016764) #11	ALX4 (ENSODEG00000016139) #12	ENSODEG00000016065	ENSODEG00000020356	ENSODEG00000016115 #14	TSPAN18 (ENSODEG00000016609) #15	TP53I11 (ENSODEG00000016164) #16	ENSODEG00000015982	PRDM11 (ENSODEG00000016043) #17	SYT13 (ENSODEG00000016104) #18	CHST1 (ENSODEG00000020411) #19	SLC35C1 (ENSODEG00000016358) #20	CRY2 (ENSODEG00000016685) #21	MAPK8IP1 (ENSODEG00000016178) #22	FREY1 (ENSODEG00000016189) #23	PEX16 (ENSODEG00000016153) #24	LARGE2 (ENSODEG00000016208) #25	PHF21A (ENSODEG00000017531) #26	ENSODEG00000016543	ENSODEG00000016348	CREB3L1 (ENSODEG00000016017) #27	ENSODEG00000016039	ENSODEG00000016420 #29	DGKZ (ENSODEG00000016309) #29	MDK (ENSODEG00000015931) #30	CHRM4 (ENSODEG00000020352) #31	AMBRA1 (ENSODEG00000016633) #32	ENSODEG00000016339	ATG13 (ENSODEG00000017294) #34
Guinea pig	MODERN SPECIES	72	TTC17 (ENSCPOG00000013524)	HSD17B12 (ENSCPOG00000031159)	ALKBH3 (ENSCPOG00000005138) #7	C11orf96 (ENSCPOG00000027092) #8	ACCS (ENSCPOG00000011925) #10	EXT2 (ENSCPOG00000011931) #11	ALX4 (ENSCPOG00000022496) #12	CD82 (ENSCPOG00000026415) #14	TSPAN18 (ENSCPOG00000001959) #15	TP53I11 (ENSCPOG00000038980) #16	PRDM11 (ENSCPOG00000019447) #17	SYT13 (ENSCPOG00000008033) #18	CHST1 (ENSCPOG00000037376) #19	SLC35C1 (ENSCPOG00000037302) #20	CRY2 (ENSCPOG00000001296) #21	MAPK8IP1 (ENSCPOG00000001298) #22	FREY1 (ENSCPOG00000032012) #23	PEX16 (ENSCPOG00000027497) #24	LARGE2 (ENSCPOG00000033339) #25	PHF21A (ENSCPOG00000001299) #26	CREB3L1 (ENSCPOG00000010073) #27	DGKZ (ENSCPOG00000009636) #29	MDK (ENSCPOG00000007340) #30	CHRM4 (ENSCPOG00000020788) #31	AMBRA1 (ENSCPOG00000007341) #32	HARBI1 (ENSCPOG00000037304) #33	ATG13 (ENSCPOG00000013042) #34	ARHGAP1 (ENSCPOG00000013046) #35	F2 (ENSCPOG00000026682) #36	CKAP5 (ENSCPOG00000007054) #37	LRP4 (ENSCPOG00000007072)
Rodentia_B	ANCESTRAL SPECIES	5	ENSGT00940000154860	ENSGT00940000157226 #7	ENSGT00390000016821 #8	ENSGT00940000162841 #9	ENSGT00940000161101 #10	ENSGT00940000156620 #11	ENSGT00940000159662 #12	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT01100000264486	ENSGT00940000159848 #27	ENSGT00860000136066	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062
Myomorpha	ANCESTRAL SPECIES	4	ENSGT00940000154860	ENSGT00940000157226.f #7	ENSGT00390000016821 #8	ENSGT00940000162841 #9	ENSGT00940000161101 #10	ENSGT00940000156620 #11	ENSGT00940000159662 #12	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #27	ENSGT00860000136066	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062	ENSGT00940000154234.b #36
Muroidea	ANCESTRAL SPECIES	2	ENSGT00940000154860	ENSGT00940000157226.f #7	ENSGT00390000016821 #8	ENSGT00940000162841 #9	ENSGT00940000161101 #10	ENSGT00940000156620 #11	ENSGT00940000159662 #12	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #27	ENSGT00860000136066	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062	ENSGT00940000154234.b #36
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00940000154860	ENSGT00940000157226.f #7	ENSGT00390000016821 #8	ENSGT00940000162841 #9	ENSGT00940000161101 #10	ENSGT00940000156620 #11	ENSGT00940000159662 #12	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #27	ENSGT00860000136066	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062	ENSGT00940000154234.b #36
Cricetidae	ANCESTRAL SPECIES	5	ENSGT00940000154860	ENSGT00940000157226.f #7	ENSGT00390000016821 #8	ENSGT00940000162841 #9	ENSGT00940000161101 #10	ENSGT00940000156620 #11	ENSGT00940000159662 #12	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #27	ENSGT00860000136066	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062	ENSGT00940000154234.b #36
Cricetidae_B	ANCESTRAL SPECIES	34	ENSGT00940000154860	ENSGT00940000157226.f #7	ENSGT00390000016821 #8	ENSGT00940000162841 #9	ENSGT00940000161101 #10	ENSGT00940000156620 #11	ENSGT00940000159662 #12	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #27	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Northern American deer mouse	MODERN SPECIES	17	Hsd17b12 (ENSPEMG00000019400)	Alkbh3 (ENSPEMG00000019372) #7	Gm13889 (ENSPEMG00000025209) #8	Accs (ENSPEMG00000016421) #10	Ext2 (ENSPEMG00000022691) #11	Alx4 (ENSPEMG00000022456) #12	Cd82 (ENSPEMG00000014649) #14	Tspan18 (ENSPEMG00000028780) #15	Trp53i11 (ENSPEMG00000028703) #16	ENSPEMG00000031347 #17	ENSPEMG00000025900	Syt13 (ENSPEMG00000000686) #18	Chst1 (ENSPEMG00000023266) #19	Slc35c1 (ENSPEMG00000027919) #20	Cry2 (ENSPEMG00000018313) #21	Mapk8ip1 (ENSPEMG00000019088) #22	Frey1 (ENSPEMG00000018435) #23	Pex16 (ENSPEMG00000008055) #24	Large2 (ENSPEMG00000013026) #25	Phf21a (ENSPEMG00000004446) #26	Creb3l1 (ENSPEMG00000019031) #27	Dgkz (ENSPEMG00000009628) #29	Mdk (ENSPEMG00000014123) #30	Chrm4 (ENSPEMG00000028345) #31	Ambra1 (ENSPEMG00000005111) #32	ENSPEMG00000025318	Harbi1 (ENSPEMG00000013606) #33	Atg13 (ENSPEMG00000017021) #34	Arhgap1 (ENSPEMG00000011370) #35	Zfp408 (ENSPEMG00000016757)	F2 (ENSPEMG00000018118) #36
Prairie vole	MODERN SPECIES	81	Alkbh3 (ENSMOCG00000012816) #7	ENSMOCG00000010059 #8	Accsl (ENSMOCG00000009949) #9	Accs (ENSMOCG00000015335) #10	Ext2 (ENSMOCG00000018938) #11	Alx4 (ENSMOCG00000004542) #12	Cd82 (ENSMOCG00000016145) #14	Tspan18 (ENSMOCG00000022221) #15	Trp53i11 (ENSMOCG00000022849) #16	ENSMOCG00000019982 #17	Syt13 (ENSMOCG00000013286) #18	Chst1 (ENSMOCG00000013785) #19	ENSMOCG00000015940	Slc35c1 (ENSMOCG00000000842) #20	ENSMOCG00000001841 #21	Mapk8ip1 (ENSMOCG00000007285) #22	Frey1 (ENSMOCG00000012907) #23	Pex16 (ENSMOCG00000015385) #24	Large2 (ENSMOCG00000004366) #25	Phf21a (ENSMOCG00000018126) #26	Creb3l1 (ENSMOCG00000012802) #27	Dgkz (ENSMOCG00000000694) #29	Mdk (ENSMOCG00000014474) #30	Chrm4 (ENSMOCG00000016103) #31	Ambra1 (ENSMOCG00000018792) #32	ENSMOCG00000007253	Atg13 (ENSMOCG00000018209) #34	Arhgap1 (ENSMOCG00000008533) #35	F2 (ENSMOCG00000019585) #36	Ckap5 (ENSMOCG00000022214) #37	Lrp4 (ENSMOCG00000005823)
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00390000006196	ENSGT00940000154860	ENSGT00940000157226.f #7	ENSGT00390000016821 #8	ENSGT00940000161101 #10	ENSGT00940000156620 #11	ENSGT00940000159662 #12	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #27	ENSGT00860000136066	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062	ENSGT00940000154234.b #36
Golden Hamster	MODERN SPECIES	618	ENSMAUG00000008950	Ttc17 (ENSMAUG00000010822)	Hsd17b12 (ENSMAUG00000011836)	Alkbh3 (ENSMAUG00000009317) #7	ENSMAUG00000010918 #8	Accs (ENSMAUG00000007912) #10	Ext2 (ENSMAUG00000009741) #11	Alx4 (ENSMAUG00000002663) #12	Cd82 (ENSMAUG00000003346) #14	Tspan18 (ENSMAUG00000003687) #15	Trp53i11 (ENSMAUG00000010266) #16	ENSMAUG00000010059 #17	Syt13 (ENSMAUG00000013295) #18	Chst1 (ENSMAUG00000011799) #19	Cry2 (ENSMAUG00000004486) #21	Mapk8ip1 (ENSMAUG00000005802) #22	Frey1 (ENSMAUG00000006630) #23	Pex16 (ENSMAUG00000011878) #24	Large2 (ENSMAUG00000008548) #25	Phf21a (ENSMAUG00000011351) #26	Creb3l1 (ENSMAUG00000003224) #27	Dgkz (ENSMAUG00000008433) #29	Mdk (ENSMAUG00000006759) #30	Chrm4 (ENSMAUG00000007510) #31	Ambra1 (ENSMAUG00000008821) #32	Harbi1 (ENSMAUG00000012193) #33	Atg13 (ENSMAUG00000011052) #34	Arhgap1 (ENSMAUG00000012048) #35	F2 (ENSMAUG00000009414) #36	Ckap5 (ENSMAUG00000012944) #37	Lrp4 (ENSMAUG00000016435)
Chinese hamster chok1gshd	MODERN SPECIES	188	Ttc17 (ENSCGRG00001008891)	Hsd17b12 (ENSCGRG00001024805)	Alkbh3 (ENSCGRG00001014489) #7	Gm13889 (ENSCGRG00001015067) #8	Accs (ENSCGRG00001017403) #10	Ext2 (ENSCGRG00001018610) #11	Alx4 (ENSCGRG00001013158) #12	Cd82 (ENSCGRG00001014213) #14	Tspan18 (ENSCGRG00001014966) #15	Trp53i11 (ENSCGRG00001015881) #16	ENSCGRG00001016971 #17	Syt13 (ENSCGRG00001017740) #18	Chst1 (ENSCGRG00001010952) #19	Slc35c1 (ENSCGRG00001019726) #20	Cry2 (ENSCGRG00001020400) #21	Mapk8ip1 (ENSCGRG00001016399) #22	Frey1 (ENSCGRG00001017596) #23	Pex16 (ENSCGRG00001024899) #24	Large2 (ENSCGRG00001001247) #25	Phf21a (ENSCGRG00001007974) #26	Creb3l1 (ENSCGRG00001011598) #27	Dgkz (ENSCGRG00001021082) #29	ENSCGRG00001011874	Mdk (ENSCGRG00001022566) #30	Chrm4 (ENSCGRG00001012019) #31	Ambra1 (ENSCGRG00001020313) #32	Harbi1 (ENSCGRG00001021313) #33	Atg13 (ENSCGRG00001022112) #34	ENSCGRG00001022859	Arhgap1 (ENSCGRG00001023260) #35	Zfp408 (ENSCGRG00001023588)
Murinae	ANCESTRAL SPECIES	1	ENSGT00940000154860	ENSGT00940000157226.f #7	ENSGT00390000016821 #8	ENSGT00940000162841 #9	ENSGT00940000161101 #10	ENSGT00940000156620 #11	ENSGT00940000159662 #12	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #27	ENSGT00860000136066	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062	ENSGT00940000154234.b #36
Mus	ANCESTRAL SPECIES	1	ENSGT00940000157226.e #7	ENSGT00390000016821 #8	ENSGT00940000162841 #9	ENSGT00940000161101 #10	ENSGT00940000156620 #11	ENSGT00940000159662 #12	ENSGT00860000136063	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #27	ENSGT00860000136066	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062	ENSGT00940000154234.b #36
Mus_A	ANCESTRAL SPECIES		ENSGT00940000157226.e #7	ENSGT00390000016821 #8	ENSGT00940000162841 #9	ENSGT00940000161101 #10	ENSGT00940000156620 #11	ENSGT00940000159662 #12	ENSGT00860000136063	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #27	ENSGT00860000136066	ENSGT00940000156152 #29	ENSGT00390000007640.b.g #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062	ENSGT00940000154234.b #36
Mus_B	ANCESTRAL SPECIES	1	ENSGT00940000157226.e #7	ENSGT00390000016821 #8	ENSGT00940000162841 #9	ENSGT00940000161101 #10	ENSGT00940000156620 #11	ENSGT00940000159662 #12	ENSGT00860000136063	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #27	ENSGT00860000136066	ENSGT00940000156152 #29	ENSGT00390000007640.b.g #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062	ENSGT00940000154234.b #36
Mus_C	ANCESTRAL SPECIES		ENSGT00940000157226.e #7	ENSGT00390000016821 #8	ENSGT00940000162841 #9	ENSGT00940000161101 #10	ENSGT00940000156620 #11	ENSGT00940000159662 #12	ENSGT00860000136063	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #27	ENSGT00860000136066	ENSGT00940000156152 #29	ENSGT00390000007640.b.g #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062	ENSGT00940000154234.b #36
spretus	MODERN SPECIES	11	MGP_SPRETEiJ_G0024904 #7	Gm13889 (MGP_SPRETEiJ_G0024903) #8	Accsl (MGP_SPRETEiJ_G0024902) #9	Accs (MGP_SPRETEiJ_G0024901) #10	Ext2 (MGP_SPRETEiJ_G0024900) #11	Alx4 (MGP_SPRETEiJ_G0024899) #12	MGP_SPRETEiJ_G0024898	Cd82 (MGP_SPRETEiJ_G0024897) #14	Tspan18 (MGP_SPRETEiJ_G0024896) #15	Trp53i11 (MGP_SPRETEiJ_G0024895) #16	MGP_SPRETEiJ_G0024894 #17	Syt13 (MGP_SPRETEiJ_G0024893) #18	Chst1 (MGP_SPRETEiJ_G0024892) #19	Slc35c1 (MGP_SPRETEiJ_G0024891) #20	Cry2 (MGP_SPRETEiJ_G0024890) #21	Mapk8ip1 (MGP_SPRETEiJ_G0024889) #22	Frey1 (MGP_SPRETEiJ_G0024888) #23	Pex16 (MGP_SPRETEiJ_G0024887) #24	Large2 (MGP_SPRETEiJ_G0024886) #25	Phf21a (MGP_SPRETEiJ_G0024885) #26	Creb3l1 (MGP_SPRETEiJ_G0024884) #27	MGP_SPRETEiJ_G0024883	Dgkz (MGP_SPRETEiJ_G0024882) #29	Mdk (MGP_SPRETEiJ_G0024881) #30	Chrm4 (MGP_SPRETEiJ_G0024880) #31	Ambra1 (MGP_SPRETEiJ_G0024879) #32	Harbi1 (MGP_SPRETEiJ_G0024878) #33	Atg13 (MGP_SPRETEiJ_G0024877) #34	Arhgap1 (MGP_SPRETEiJ_G0024876) #35	Zfp408 (MGP_SPRETEiJ_G0024875)	F2 (MGP_SPRETEiJ_G0024874) #36
Steppe mouse	MODERN SPECIES	36	Accsl (ENSMSIG00000018045) #9	Ext2 (ENSMSIG00000018155) #11	Alx4 (ENSMSIG00000018194) #12	ENSMSIG00000018210	ENSMSIG00000018226	Cd82 (ENSMSIG00000018232) #14	Tspan18 (ENSMSIG00000018260) #15	ENSMSIG00000018279 #16	Prdm11 (ENSMSIG00000018308) #17	ENSMSIG00000018406	Syt13 (ENSMSIG00000018415) #18	Chst1 (ENSMSIG00000018432) #19	ENSMSIG00000018438	Slc35c1 (ENSMSIG00000018455) #20	Cry2 (ENSMSIG00000018499) #21	Mapk8ip1 (ENSMSIG00000018534) #22	Frey1 (ENSMSIG00000018641) #23	Pex16 (ENSMSIG00000018650) #24	Large2 (ENSMSIG00000018698) #25	Phf21a (ENSMSIG00000018990) #26	Creb3l1 (ENSMSIG00000019325) #27	Dgkz (ENSMSIG00000019366) #29	ENSMSIG00000019782	Mdk (ENSMSIG00000019785) #30	Chrm4 (ENSMSIG00000019816) #31	Ambra1 (ENSMSIG00000019820) #32	Harbi1 (ENSMSIG00000019911) #33	Atg13 (ENSMSIG00000019915) #34	Arhgap1 (ENSMSIG00000020000) #35	Zfp408 (ENSMSIG00000020068)	F2 (ENSMSIG00000020083) #36
Mouse	MODERN SPECIES	11	Alkbh3 (ENSMUSG00000040174) #7	Gm27027 (ENSMUSG00000098004)	Gm13889 (ENSMUSG00000087006) #8	Accsl (ENSMUSG00000075023) #9	Accs (ENSMUSG00000040272) #10	Ext2 (ENSMUSG00000027198) #11	Alx4 (ENSMUSG00000040310) #12	Cd82 (ENSMUSG00000027215) #14	Tspan18 (ENSMUSG00000027217) #15	Trp53i11 (ENSMUSG00000068735) #16	Prdm11 (ENSMUSG00000075028) #17	Syt13 (ENSMUSG00000027220) #18	Chst1 (ENSMUSG00000027221) #19	Slc35c1 (ENSMUSG00000049922) #20	Cry2 (ENSMUSG00000068742) #21	Mapk8ip1 (ENSMUSG00000027223) #22	Frey1 (ENSMUSG00000044916) #23	Pex16 (ENSMUSG00000027222) #24	Large2 (ENSMUSG00000040434) #25	Phf21a (ENSMUSG00000058318) #26	Creb3l1 (ENSMUSG00000027230) #27	Dgkz (ENSMUSG00000040479) #29	Mdk (ENSMUSG00000027239) #30	Chrm4 (ENSMUSG00000040495) #31	Ambra1 (ENSMUSG00000040506) #32	Harbi1 (ENSMUSG00000027243) #33	Atg13 (ENSMUSG00000027244) #34	Arhgap1 (ENSMUSG00000027247) #35	Zfp408 (ENSMUSG00000075040)	F2 (ENSMUSG00000027249) #36	Ckap5 (ENSMUSG00000040549) #37
Ryukyu mouse	MODERN SPECIES	11	MGP_CAROLIEiJ_G0023994 #7	Gm13889 (MGP_CAROLIEiJ_G0023993) #8	MGP_CAROLIEiJ_G0023992 #9	Accs (MGP_CAROLIEiJ_G0023991) #10	Ext2 (MGP_CAROLIEiJ_G0023990) #11	Alx4 (MGP_CAROLIEiJ_G0023989) #12	MGP_CAROLIEiJ_G0023988	Cd82 (MGP_CAROLIEiJ_G0023987) #14	Tspan18 (MGP_CAROLIEiJ_G0023986) #15	MGP_CAROLIEiJ_G0023985 #16	MGP_CAROLIEiJ_G0023984 #17	Syt13 (MGP_CAROLIEiJ_G0023983) #18	Chst1 (MGP_CAROLIEiJ_G0023982) #19	Slc35c1 (MGP_CAROLIEiJ_G0023981) #20	Cry2 (MGP_CAROLIEiJ_G0023980) #21	Mapk8ip1 (MGP_CAROLIEiJ_G0023979) #22	Frey1 (MGP_CAROLIEiJ_G0023978) #23	Pex16 (MGP_CAROLIEiJ_G0023977) #24	Large2 (MGP_CAROLIEiJ_G0023976) #25	Phf21a (MGP_CAROLIEiJ_G0023975) #26	Creb3l1 (MGP_CAROLIEiJ_G0023974) #27	MGP_CAROLIEiJ_G0023973	Dgkz (MGP_CAROLIEiJ_G0023972) #29	Mdk (MGP_CAROLIEiJ_G0023971) #30	Chrm4 (MGP_CAROLIEiJ_G0023970) #31	Ambra1 (MGP_CAROLIEiJ_G0023969) #32	Harbi1 (MGP_CAROLIEiJ_G0023968) #33	Atg13 (MGP_CAROLIEiJ_G0023967) #34	Arhgap1 (MGP_CAROLIEiJ_G0023966) #35	Zfp408 (MGP_CAROLIEiJ_G0023965)	F2 (MGP_CAROLIEiJ_G0023964) #36
Shrew mouse	MODERN SPECIES	16	Alkbh3 (MGP_PahariEiJ_G0025431) #7	MGP_PahariEiJ_G0025430 #7	Gm13889 (MGP_PahariEiJ_G0025429) #8	Accsl (MGP_PahariEiJ_G0025428) #9	Accs (MGP_PahariEiJ_G0025427) #10	Ext2 (MGP_PahariEiJ_G0025426) #11	Alx4 (MGP_PahariEiJ_G0025425) #12	MGP_PahariEiJ_G0025424	Cd82 (MGP_PahariEiJ_G0025423) #14	Tspan18 (MGP_PahariEiJ_G0025422) #15	Trp53i11 (MGP_PahariEiJ_G0025421) #16	MGP_PahariEiJ_G0025420 #17	Syt13 (MGP_PahariEiJ_G0025419) #18	Chst1 (MGP_PahariEiJ_G0025418) #19	Cry2 (MGP_PahariEiJ_G0025417) #21	Mapk8ip1 (MGP_PahariEiJ_G0025416) #22	Frey1 (MGP_PahariEiJ_G0025415) #23	Pex16 (MGP_PahariEiJ_G0025414) #24	Large2 (MGP_PahariEiJ_G0025413) #25	Phf21a (MGP_PahariEiJ_G0025412) #26	Creb3l1 (MGP_PahariEiJ_G0025411) #27	MGP_PahariEiJ_G0025410	Dgkz (MGP_PahariEiJ_G0025409) #29	Mdk (MGP_PahariEiJ_G0025408) #30	Chrm4 (MGP_PahariEiJ_G0025407) #31	Ambra1 (MGP_PahariEiJ_G0025406) #32	Harbi1 (MGP_PahariEiJ_G0025405) #33	Atg13 (MGP_PahariEiJ_G0025404) #34	Arhgap1 (MGP_PahariEiJ_G0025403) #35	Zfp408 (MGP_PahariEiJ_G0025402)	F2 (MGP_PahariEiJ_G0025401) #36
Rat	MODERN SPECIES	13	Alkbh3 (ENSRNOG00000021678) #7	RGD1564664 (ENSRNOG00000055564) #8	Accsl (ENSRNOG00000042533) #9	Accs (ENSRNOG00000009199) #10	Ext2 (ENSRNOG00000008944) #11	Alx4 (ENSRNOG00000000008) #12	Cd82 (ENSRNOG00000000047) #14	Tspan18 (ENSRNOG00000008758) #15	Tp53i11 (ENSRNOG00000008738) #16	ENSRNOG00000068495	Prdm11 (ENSRNOG00000008674) #17	Syt13 (ENSRNOG00000008000) #18	Chst1 (ENSRNOG00000007989) #19	Slc35c1 (ENSRNOG00000007732) #20	Cry2 (ENSRNOG00000007478) #21	Mapk8ip1 (ENSRNOG00000058478) #22	Frey1 (ENSRNOG00000006884) #23	Pex16 (ENSRNOG00000006539) #24	Large2 (ENSRNOG00000006353) #25	Phf21a (ENSRNOG00000006063) #26	Creb3l1 (ENSRNOG00000005413) #27	Dgkz (ENSRNOG00000017737) #29	Mdk (ENSRNOG00000017560) #30	Chrm4 (ENSRNOG00000017556) #31	Ambra1 (ENSRNOG00000017422) #32	Atg13 (ENSRNOG00000016984) #34	Arhgap1 (ENSRNOG00000016610) #35	ENSRNOG00000070459	F2 (ENSRNOG00000016325) #36	Ckap5 (ENSRNOG00000016067) #37	Lrp4 (ENSRNOG00000015285)
Upper Galilee mountains blind mole rat	MODERN SPECIES	871														Slc35c1 (ENSNGAG00000000960) #20	Cry2 (ENSNGAG00000002383) #21	Mapk8ip1 (ENSNGAG00000011626) #22	Frey1 (ENSNGAG00000016997) #23	Pex16 (ENSNGAG00000020802) #24	Large2 (ENSNGAG00000019218) #25	Phf21a (ENSNGAG00000014772) #26
Lesser Egyptian jerboa	MODERN SPECIES	62	0610010K14Rik (ENSJJAG00000018786)	Rnasek (ENSJJAG00000018322)	Alox12 (ENSJJAG00000000399)	ENSJJAG00000008060	Pelp1 (ENSJJAG00000013033)	Ext2 (ENSJJAG00000003668) #11	Alx4 (ENSJJAG00000014358) #12	Cd82 (ENSJJAG00000010666) #14	Tspan18 (ENSJJAG00000009258) #15	Trp53i11 (ENSJJAG00000010306) #16	ENSJJAG00000020448 #17	Syt13 (ENSJJAG00000015391) #18	Chst1 (ENSJJAG00000009883) #19	Slc35c1 (ENSJJAG00000024143) #20	Cry2 (ENSJJAG00000023774) #21	Mapk8ip1 (ENSJJAG00000006389) #22	Frey1 (ENSJJAG00000020049) #23	Pex16 (ENSJJAG00000022973) #24	Large2 (ENSJJAG00000015799) #25	Phf21a (ENSJJAG00000016994) #26	Creb3l1 (ENSJJAG00000014152) #27	Dgkz (ENSJJAG00000003197) #29	Mdk (ENSJJAG00000023305) #30	Chrm4 (ENSJJAG00000010466) #31	Ambra1 (ENSJJAG00000004138) #32	ENSJJAG00000016975	ENSJJAG00000015195	Atg13 (ENSJJAG00000024173) #34	Arhgap1 (ENSJJAG00000022610) #35	Zfp408 (ENSJJAG00000015381)	F2 (ENSJJAG00000005619) #36
Kangaroo rat	MODERN SPECIES	444	Ttc17 (ENSDORG00000002398)	ENSDORG00000004834	Alkbh3 (ENSDORG00000000083) #7	ENSDORG00000004336 #8	Accs (ENSDORG00000005063) #10	Ext2 (ENSDORG00000012848) #11	Alx4 (ENSDORG00000014002) #12	Cd82 (ENSDORG00000029810) #14	Tspan18 (ENSDORG00000004841) #15	Trp53i11 (ENSDORG00000024778) #16	ENSDORG00000029092 #17	Syt13 (ENSDORG00000005470) #18	Chst1 (ENSDORG00000025502) #19	Slc35c1 (ENSDORG00000027177) #20	Cry2 (ENSDORG00000015496) #21	Mapk8ip1 (ENSDORG00000015499) #22	Frey1 (ENSDORG00000024564) #23	Pex16 (ENSDORG00000015504) #24	Large2 (ENSDORG00000015507) #25	Phf21a (ENSDORG00000015508) #26	ENSDORG00000025559	Creb3l1 (ENSDORG00000023541) #27	ENSDORG00000028371	Dgkz (ENSDORG00000008377) #29	Mdk (ENSDORG00000029447) #30	Chrm4 (ENSDORG00000024984) #31	Ambra1 (ENSDORG00000008382) #32	ENSDORG00000028941	Atg13 (ENSDORG00000000382) #34	Arhgap1 (ENSDORG00000000385) #35	Zfp408 (ENSDORG00000000387)
Lagomorpha	ANCESTRAL SPECIES	4	ENSGT00940000154860	ENSGT00940000157226 #7	ENSGT00390000016821 #8	ENSGT00940000162841 #9	ENSGT00940000161101 #10	ENSGT00940000156620 #11	ENSGT00940000159662 #12	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #27	ENSGT00940000156152 #29	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062	ENSGT00940000164059	ENSGT00390000014757 #37	ENSGT00940000158287	ENSGT00390000012935
Pika	MODERN SPECIES	674															ENSOPRG00000009369 #21	ENSOPRG00000009395 #22	ENSOPRG00000009435 #24
Rabbit	MODERN SPECIES		TTC17 (ENSOCUG00000014674)	HSD17B12 (ENSOCUG00000016351)	ALKBH3 (ENSOCUG00000016359) #7	C11orf96 (ENSOCUG00000021313) #8	ACCSL (ENSOCUG00000007146) #9	EXT2 (ENSOCUG00000007361) #11	ALX4 (ENSOCUG00000007369) #12	CD82 (ENSOCUG00000000861) #14	ENSOCUG00000023681 #15	TP53I11 (ENSOCUG00000001307) #16	PRDM11 (ENSOCUG00000027797) #17	SYT13 (ENSOCUG00000005321) #18	CHST1 (ENSOCUG00000006596) #19	SLC35C1 (ENSOCUG00000015335) #20	CRY2 (ENSOCUG00000025433) #21	ENSOCUG00000023020 #22	PEX16 (ENSOCUG00000001670) #24	LARGE2 (ENSOCUG00000001671) #25	PHF21A (ENSOCUG00000001675) #26	CREB3L1 (ENSOCUG00000004418) #27	ENSOCUG00000024752 #29	CHRM4 (ENSOCUG00000021064) #31	AMBRA1 (ENSOCUG00000016117) #32	HARBI1 (ENSOCUG00000016137) #33	ATG13 (ENSOCUG00000016144) #34	ARHGAP1 (ENSOCUG00000016160) #35	ZNF408 (ENSOCUG00000010953)	CKAP5 (ENSOCUG00000016200) #37	LRP4 (ENSOCUG00000002052)	CSTPP1 (ENSOCUG00000002066)	ENSOCUG00000002073
Tree shrew	MODERN SPECIES	928																MAPK8IP1 (ENSTBEG00000014701) #22	ENSTBEG00000014869 #24	ENSTBEG00000015132 #25	PHF21A (ENSTBEG00000015434) #26