Euteleostomi	ANCESTRAL SPECIES	42	ENSGT00940000161128	ENSGT01090000260003.a.a	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000164361	ENSGT00730000111007.a.b	ENSGT00940000157530.b	ENSGT00390000013899.b	ENSGT00940000161262 #18	ENSGT00940000153571.b	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22
Sarcopterygii	ANCESTRAL SPECIES	123	ENSGT00940000164760	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161051.b	ENSGT01020000230346.E	ENSGT00390000015299.a.a	ENSGT00390000013899.b	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24
Tetrapoda	ANCESTRAL SPECIES	9	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000164760	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161051.b	ENSGT00390000013899.b	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT01030000234629.E.b	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000164059	ENSGT00390000014757 #37
Amniota	ANCESTRAL SPECIES	20	ENSGT00390000016821	ENSGT00940000164760	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00930000151992	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161051.b	ENSGT00390000013899.b	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000164059	ENSGT00390000014757 #37	ENSGT00940000158287
Mammalia	ANCESTRAL SPECIES	9	ENSGT00390000016821	ENSGT00940000164760	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00930000151992	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00390000013899.b	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000164059	ENSGT00390000014757 #37
Theria	ANCESTRAL SPECIES	8	ENSGT00390000016821	ENSGT00940000164760	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00930000151992	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00390000013899.b	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000164059	ENSGT00390000014757 #37
Eutheria	ANCESTRAL SPECIES	3	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00930000151992	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00930000151992	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00910000148141	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00910000148141	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36
Primates	ANCESTRAL SPECIES		ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00910000148141	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36
Haplorrhini	ANCESTRAL SPECIES		ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00910000148141	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36
Simiiformes	ANCESTRAL SPECIES		ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00910000148141	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00410000028889 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00910000148141	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00410000028889 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b.l #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00910000148141	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00410000028889 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b.l #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00910000148141	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00410000028889 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b.l #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00910000148141	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36
Macaca	ANCESTRAL SPECIES	2	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00410000028889 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b.l #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Macaca_a	ANCESTRAL SPECIES	3	ENSGT00940000157226	ENSGT00390000016821	ENSGT01100000263577.a.a.b.a.b.a.a.b.b.a.a #7	ENSGT00940000162841 #8	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00410000028889 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000161627.a.a.a.a.b.a.a.a.a.b.b.a.a.b.b.a #26	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b.l #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Rhesus	MODERN SPECIES	5	ENSMMUG00000059789 #7	ACCSL (ENSMMUG00000019693) #8	EXT2 (ENSMMUG00000013095) #9	ALX4 (ENSMMUG00000049355) #10	ENSMMUG00000053780 #11	CD82 (ENSMMUG00000019268) #12	TSPAN18 (ENSMMUG00000000368) #13	TP53I11 (ENSMMUG00000059728) #14	ENSMMUG00000052571 #15	PRDM11 (ENSMMUG00000015106) #16	SYT13 (ENSMMUG00000011449) #17	CHST1 (ENSMMUG00000000874) #18	ENSMMUG00000047219 #19	SLC35C1 (ENSMMUG00000002452) #20	CRY2 (ENSMMUG00000002453) #21	MAPK8IP1 (ENSMMUG00000002456) #22	PEX16 (ENSMMUG00000008878) #23	LARGE2 (ENSMMUG00000002611) #24	PHF21A (ENSMMUG00000002617) #25	ENSMMUG00000053388 #26	CREB3L1 (ENSMMUG00000018571) #27	DGKZ (ENSMMUG00000021446) #28	MDK (ENSMMUG00000038138) #29	CHRM4 (ENSMMUG00000039412) #30	AMBRA1 (ENSMMUG00000011526) #31	HARBI1 (ENSMMUG00000059160) #32	ATG13 (ENSMMUG00000019672) #33	ARHGAP1 (ENSMMUG00000007831) #34	ZNF408 (ENSMMUG00000063711) #35	F2 (ENSMMUG00000019674) #36	CKAP5 (ENSMMUG00000003631) #37
Crab-eating macaque	MODERN SPECIES	5	ALKBH3 (ENSMFAG00000031334)	C11orf96 (ENSMFAG00000030397)	ENSMFAG00000064908 #7	ACCSL (ENSMFAG00000041332) #8	EXT2 (ENSMFAG00000043519) #9	ALX4 (ENSMFAG00000002075) #10	CD82 (ENSMFAG00000035741) #12	TSPAN18 (ENSMFAG00000054272) #13	TP53I11 (ENSMFAG00000035363) #14	PRDM11 (ENSMFAG00000045073) #16	SYT13 (ENSMFAG00000056606) #17	CHST1 (ENSMFAG00000033195) #18	ENSMFAG00000029506 #19	SLC35C1 (ENSMFAG00000052749) #20	CRY2 (ENSMFAG00000045219) #21	MAPK8IP1 (ENSMFAG00000045393) #22	FREY1 (ENSMFAG00000056527)	PEX16 (ENSMFAG00000002349) #23	LARGE2 (ENSMFAG00000002253) #24	PHF21A (ENSMFAG00000043688) #25	ENSMFAG00000058269 #26	CREB3L1 (ENSMFAG00000031047) #27	DGKZ (ENSMFAG00000032211) #28	MDK (ENSMFAG00000000818) #29	CHRM4 (ENSMFAG00000021204) #30	ENSMFAG00000002000 #31	HARBI1 (ENSMFAG00000002487) #32	ATG13 (ENSMFAG00000038288) #33	ARHGAP1 (ENSMFAG00000036912) #34	ZNF408 (ENSMFAG00000036575) #35	F2 (ENSMFAG00000031977) #36
Pig-tailed macaque	MODERN SPECIES	485	ENSMNEG00000041918	ALKBH3 (ENSMNEG00000042403)	C11orf96 (ENSMNEG00000026217)	ACCSL (ENSMNEG00000028079) #8	ACCS (ENSMNEG00000038482)	EXT2 (ENSMNEG00000018683) #9	ALX4 (ENSMNEG00000037261) #10	CD82 (ENSMNEG00000031650) #12	TSPAN18 (ENSMNEG00000036152) #13	TP53I11 (ENSMNEG00000039232) #14	PRDM11 (ENSMNEG00000028352) #16	SYT13 (ENSMNEG00000042088) #17	ENSMNEG00000040801 #19	SLC35C1 (ENSMNEG00000031995) #20	CRY2 (ENSMNEG00000032337) #21	MAPK8IP1 (ENSMNEG00000038621) #22	FREY1 (ENSMNEG00000035102)	PEX16 (ENSMNEG00000043356) #23	LARGE2 (ENSMNEG00000040995) #24	PHF21A (ENSMNEG00000041377) #25	CREB3L1 (ENSMNEG00000041356) #27	DGKZ (ENSMNEG00000042881) #28	MDK (ENSMNEG00000006686) #29	CHRM4 (ENSMNEG00000019466) #30	AMBRA1 (ENSMNEG00000041218) #31	HARBI1 (ENSMNEG00000039470) #32	ATG13 (ENSMNEG00000028546) #33	ARHGAP1 (ENSMNEG00000044079) #34	ZNF408 (ENSMNEG00000040215) #35	F2 (ENSMNEG00000040864) #36	CKAP5 (ENSMNEG00000045449) #37
Cercopithecinae_b	ANCESTRAL SPECIES	27	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00410000028889 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b.l #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00910000148141	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36
Olive baboon	MODERN SPECIES	3	ACCSL (ENSPANG00000016162) #8	ALKBH3 (ENSPANG00000003104)	EXT2 (ENSPANG00000007186) #9	ALX4 (ENSPANG00000023497) #10	CD82 (ENSPANG00000017077) #12	TSPAN18 (ENSPANG00000017380) #13	TP53I11 (ENSPANG00000016551) #14	ENSPANG00000044641 ##11	ENSPANG00000040777	PRDM11 (ENSPANG00000019134) #16	SYT13 (ENSPANG00000014366) #17	CHST1 (ENSPANG00000005033) #18	ENSPANG00000029497 #19	SLC35C1 (ENSPANG00000046643) #20	CRY2 (ENSPANG00000013724) #21	MAPK8IP1 (ENSPANG00000018015) #22	FREY1 (ENSPANG00000011142)	PEX16 (ENSPANG00000005226) #23	LARGE2 (ENSPANG00000016656) #24	PHF21A (ENSPANG00000016889) #25	CREB3L1 (ENSPANG00000015384) #27	DGKZ (ENSPANG00000025617) #28	MDK (ENSPANG00000020889) #29	AMBRA1 (ENSPANG00000017260) #31	CKAP5 (ENSPANG00000013230) #37	F2 (ENSPANG00000016657) #36	ZNF408 (ENSPANG00000032617) #35	ARHGAP1 (ENSPANG00000012059) #34	ATG13 (ENSPANG00000006613) #33	HARBI1 (ENSPANG00000023007) #32	ENSPANG00000023598
Cercopithecinae_d	ANCESTRAL SPECIES	61	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00410000028889 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b.l #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00910000148141	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00910000147892	ENSGT00930000151062 #35
Drill	MODERN SPECIES	1384	HSD17B12 (ENSMLEG00000042493)	ENSMLEG00000043569	ALKBH3 (ENSMLEG00000038324)	ACCSL (ENSMLEG00000040591) #8	ACCS (ENSMLEG00000031788)	EXT2 (ENSMLEG00000028504) #9	ALX4 (ENSMLEG00000030036) #10	CD82 (ENSMLEG00000038298) #12	TSPAN18 (ENSMLEG00000033147) #13	TP53I11 (ENSMLEG00000038198) #14	PRDM11 (ENSMLEG00000006161) #16	SYT13 (ENSMLEG00000028737) #17	ENSMLEG00000037814 #19	SLC35C1 (ENSMLEG00000038176) #20	CRY2 (ENSMLEG00000043646) #21	MAPK8IP1 (ENSMLEG00000011311) #22	FREY1 (ENSMLEG00000030295)	PEX16 (ENSMLEG00000036346) #23	LARGE2 (ENSMLEG00000030482) #24	PHF21A (ENSMLEG00000024105) #25	CREB3L1 (ENSMLEG00000044403) #27	DGKZ (ENSMLEG00000026419) #28	ENSMLEG00000036687 #29	CHRM4 (ENSMLEG00000007804) #30	AMBRA1 (ENSMLEG00000040418) #31	ENSMLEG00000027431	HARBI1 (ENSMLEG00000026358) #32	ATG13 (ENSMLEG00000027900) #33	ARHGAP1 (ENSMLEG00000031958) #34	ENSMLEG00000042128	ZNF408 (ENSMLEG00000044029) #35
Sooty mangabey	MODERN SPECIES	193							CD82 (ENSCATG00000012901) #12	TSPAN18 (ENSCATG00000035837) #13	TP53I11 (ENSCATG00000042615) #14	PRDM11 (ENSCATG00000014851) #16	SYT13 (ENSCATG00000029373) #17	CHST1 (ENSCATG00000014966) #18	ENSCATG00000040868 #19	SLC35C1 (ENSCATG00000037093) #20	CRY2 (ENSCATG00000043082) #21	MAPK8IP1 (ENSCATG00000021344) #22	ENSCATG00000035926	PEX16 (ENSCATG00000038049) #23	LARGE2 (ENSCATG00000033501) #24	PHF21A (ENSCATG00000034627) #25	CREB3L1 (ENSCATG00000036131) #27	ENSCATG00000005272	DGKZ (ENSCATG00000037163) #28	MDK (ENSCATG00000042264) ##29	CHRM4 (ENSCATG00000003262) #30	AMBRA1 (ENSCATG00000037285) #31	HARBI1 (ENSCATG00000043376) #32	ATG13 (ENSCATG00000038547) #33	ARHGAP1 (ENSCATG00000043789) #34	ENSCATG00000034262	ZNF408 (ENSCATG00000035814) #35
Vervet Monkey	MODERN SPECIES		ALKBH3 (ENSCSAG00000005539)	ENSCSAG00000005541	ACCSL (ENSCSAG00000005546) #8	ACCS (ENSCSAG00000005552)	EXT2 (ENSCSAG00000005563) #9	ALX4 (ENSCSAG00000005569) #10	CD82 (ENSCSAG00000005577) #12	TSPAN18 (ENSCSAG00000005584) #13	TP53I11 (ENSCSAG00000005590) #14	ENSCSAG00000005593 #16	SYT13 (ENSCSAG00000005596) #17	CHST1 (ENSCSAG00000019211) #18	SLC35C1 (ENSCSAG00000005597) #20	CRY2 (ENSCSAG00000005615) #21	FREY1 (ENSCSAG00000005627)	MAPK8IP1 (ENSCSAG00000005632) #22	PEX16 (ENSCSAG00000005637) #23	LARGE2 (ENSCSAG00000005648) #24	PHF21A (ENSCSAG00000005653) #25	CREB3L1 (ENSCSAG00000005658) #27	DGKZ (ENSCSAG00000005662) #28	ENSCSAG00000005668 #29	CHRM4 (ENSCSAG00000019210) #30	AMBRA1 (ENSCSAG00000005675) #31	HARBI1 (ENSCSAG00000005676) #32	ATG13 (ENSCSAG00000005678) #33	ARHGAP1 (ENSCSAG00000005680) #34	ZNF408 (ENSCSAG00000005681) #35	F2 (ENSCSAG00000005684) #36	CKAP5 (ENSCSAG00000005686) #37	LRP4 (ENSCSAG00000005688)
Rhinopithecus	ANCESTRAL SPECIES	64	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00410000028889 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b.l #29	ENSGT00940000160394.a #30	ENSGT00390000016223.b #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Black snub-nosed monkey	MODERN SPECIES	1919	ALKBH3 (ENSRBIG00000034161)	ENSRBIG00000035154	ACCSL (ENSRBIG00000009585) #8	ACCS (ENSRBIG00000030372)	EXT2 (ENSRBIG00000028133) #9	ALX4 (ENSRBIG00000037930) #10	CD82 (ENSRBIG00000027262) #12	TSPAN18 (ENSRBIG00000033885) #13	TP53I11 (ENSRBIG00000038004) #14	PRDM11 (ENSRBIG00000038416) #16	SYT13 (ENSRBIG00000039991) #17	CHST1 (ENSRBIG00000041102) #18	ENSRBIG00000031332 #19	SLC35C1 (ENSRBIG00000037020) #20	CRY2 (ENSRBIG00000011544) #21	MAPK8IP1 (ENSRBIG00000044423) #22	FREY1 (ENSRBIG00000026731)	PEX16 (ENSRBIG00000038630) #23	LARGE2 (ENSRBIG00000043312) #24	PHF21A (ENSRBIG00000033320) #25	CREB3L1 (ENSRBIG00000029817) #27	DGKZ (ENSRBIG00000043927) #28	ENSRBIG00000033689 #29	ENSRBIG00000031128 #31
Golden snub-nosed monkey	MODERN SPECIES	1568						CD82 (ENSRROG00000044249) #12	TSPAN18 (ENSRROG00000005654) #13	TP53I11 (ENSRROG00000034132) #14	PRDM11 (ENSRROG00000044429) #16	SYT13 (ENSRROG00000038088) #17	CHST1 (ENSRROG00000007899) #18	ENSRROG00000012829	ENSRROG00000005354 #19	SLC35C1 (ENSRROG00000001258) #20	CRY2 (ENSRROG00000031775) #21	MAPK8IP1 (ENSRROG00000000852) #22	FREY1 (ENSRROG00000033078)	PEX16 (ENSRROG00000038942) #23	LARGE2 (ENSRROG00000030434) #24	PHF21A (ENSRROG00000034376) #25	CREB3L1 (ENSRROG00000041731) #27	DGKZ (ENSRROG00000044186) #28	ENSRROG00000040007 #29	CHRM4 (ENSRROG00000024047) #30	AMBRA1 (ENSRROG00000034630) #31	HARBI1 (ENSRROG00000031237) #32	ATG13 (ENSRROG00000031087) #33	ARHGAP1 (ENSRROG00000037876) #34	ZNF408 (ENSRROG00000033904) #35	F2 (ENSRROG00000038131) #36	CKAP5 (ENSRROG00000039765) #37
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00410000028889 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00910000148141	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36
Gibbon	DUPLICATION
Gibbon	MODERN SPECIES	5	PTPMT1 (ENSNLEG00000033815)	KBTBD4 (ENSNLEG00000014672)	NDUFS3 (ENSNLEG00000028559)	ENSNLEG00000014694	MTCH2 (ENSNLEG00000034575)	AGBL2 (ENSNLEG00000014711)	FNBP4 (ENSNLEG00000014720)	NUP160 (ENSNLEG00000014735)	ENSNLEG00000033967	PTPRJ (ENSNLEG00000014775)	ENSNLEG00000027973	ENSNLEG00000031203 #19	ENSNLEG00000017985 #19	SLC35C1 (ENSNLEG00000017984) #20	ENSNLEG00000017983 #21	ENSNLEG00000017982 #22	FREY1 (ENSNLEG00000032767)	PEX16 (ENSNLEG00000031315) #23	SYT13 (ENSNLEG00000017977) #17	PRDM11 (ENSNLEG00000017975) #16	TSPAN18 (ENSNLEG00000031862) #13	ENSNLEG00000017974 #14	CD82 (ENSNLEG00000017971) #12	EXT2 (ENSNLEG00000017968) #9	ACCS (ENSNLEG00000017967)	ACCSL (ENSNLEG00000017966) #8	ENSNLEG00000017965	ENSNLEG00000030198	ALKBH3 (ENSNLEG00000027521)	ENSNLEG00000033255	HSD17B12 (ENSNLEG00000035088)
Gibbon	MODERN SPECIES	9	HEXIM2 (ENSNLEG00000031095)	ENSNLEG00000005025	SPATA32 (ENSNLEG00000005016)	MAP3K14 (ENSNLEG00000004986)	PLEKHM1 (ENSNLEG00000004936)	ENSNLEG00000036274	ENSNLEG00000004922	WNT9B (ENSNLEG00000004916)	WNT3 (ENSNLEG00000004909)	NSF (ENSNLEG00000004836)	ENSNLEG00000031038	ENSNLEG00000004810	MAPT (ENSNLEG00000004803)	ENSNLEG00000030604	KANSL1 (ENSNLEG00000004760)	ENSNLEG00000004757 #22	ENSNLEG00000031127	ENSNLEG00000004744	ENSNLEG00000004725	MYL4 (ENSNLEG00000006209)	ITGB3 (ENSNLEG00000004670)	EFCAB13 (ENSNLEG00000032324)	ENSNLEG00000031646	ENSNLEG00000033004	EFCAB3 (ENSNLEG00000004662)	ENSNLEG00000032430	ENSNLEG00000004645	MRC2 (ENSNLEG00000004611)	MARCHF10 (ENSNLEG00000004603)	TANC2 (ENSNLEG00000004554)	ENSNLEG00000028313
Hominidae	ANCESTRAL SPECIES	1	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00410000028889 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	20	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00410000028889 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00410000028889 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Pan	ANCESTRAL SPECIES	1	ENSGT00950000183070.a.b.g.b.b.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00410000028889 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Chimpanzee	MODERN SPECIES	2	ALKBH3 (ENSPTRG00000003523)	ENSPTRG00000047659	ENSPTRG00000046726	ACCSL (ENSPTRG00000028662) #8	EXT2 (ENSPTRG00000003528) #9	ALX4 (ENSPTRG00000003529) #10	CD82 (ENSPTRG00000003530) #12	TP53I11 (ENSPTRG00000003532) #14	TSPAN18 (ENSPTRG00000003531) #13	PRDM11 (ENSPTRG00000003533) #16	SYT13 (ENSPTRG00000003534) #17	CHST1 (ENSPTRG00000003535) #18	ENSPTRG00000028656 #19	SLC35C1 (ENSPTRG00000003536) #20	CRY2 (ENSPTRG00000003537) #21	MAPK8IP1 (ENSPTRG00000003538) #22	FREY1 (ENSPTRG00000050232)	PEX16 (ENSPTRG00000003539) #23	LARGE2 (ENSPTRG00000050910) #24	PHF21A (ENSPTRG00000003542) #25	CREB3L1 (ENSPTRG00000003543) #27	DGKZ (ENSPTRG00000003545) #28	MDK (ENSPTRG00000047115) #29	CHRM4 (ENSPTRG00000038696) #30	AMBRA1 (ENSPTRG00000003546) #31	ENSPTRG00000043648	HARBI1 (ENSPTRG00000003548) #32	ATG13 (ENSPTRG00000003549) #33	ARHGAP1 (ENSPTRG00000003550) #34	ZNF408 (ENSPTRG00000003551) #35	F2 (ENSPTRG00000003552) #36
Bonobo	MODERN SPECIES	2	HSD17B12 (ENSPPAG00000041012)	ENSPPAG00000043963	ALKBH3 (ENSPPAG00000028729)	ENSPPAG00000033607	ENSPPAG00000033790	ACCSL (ENSPPAG00000033128) #8	EXT2 (ENSPPAG00000041401) #9	CD82 (ENSPPAG00000022324) #12	TSPAN18 (ENSPPAG00000031547) #13	ENSPPAG00000028354 #14	PRDM11 (ENSPPAG00000043398) #16	SYT13 (ENSPPAG00000027303) #17	ENSPPAG00000035471 #19	SLC35C1 (ENSPPAG00000039643) #20	CRY2 (ENSPPAG00000033780) #21	MAPK8IP1 (ENSPPAG00000010367) #22	FREY1 (ENSPPAG00000027942)	PEX16 (ENSPPAG00000042419) #23	LARGE2 (ENSPPAG00000037963) #24	PHF21A (ENSPPAG00000040226) #25	CREB3L1 (ENSPPAG00000029634) #27	DGKZ (ENSPPAG00000038574) #28	MDK (ENSPPAG00000023561) #29	CHRM4 (ENSPPAG00000025475) #30	AMBRA1 (ENSPPAG00000034195) #31	HARBI1 (ENSPPAG00000035636) #32	ATG13 (ENSPPAG00000042268) #33	ARHGAP1 (ENSPPAG00000027953) #34	ZNF408 (ENSPPAG00000034993) #35	F2 (ENSPPAG00000041509) #36	CKAP5 (ENSPPAG00000030676) #37
Human	MODERN SPECIES	2	HSD17B12 (ENSG00000149084)	ALKBH3 (ENSG00000166199)	C11orf96 (ENSG00000187479)	ACCSL (ENSG00000205126) #8	ACCS (ENSG00000110455)	EXT2 (ENSG00000151348) #9	ALX4 (ENSG00000052850) #10	CD82 (ENSG00000085117) #12	TSPAN18 (ENSG00000157570) #13	TP53I11 (ENSG00000175274) #14	PRDM11 (ENSG00000019485) #16	SYT13 (ENSG00000019505) #17	CHST1 (ENSG00000175264) #18	SLC35C1 (ENSG00000181830) #20	CRY2 (ENSG00000121671) #21	MAPK8IP1 (ENSG00000121653) #22	FREY1 (ENSG00000234776)	PEX16 (ENSG00000121680) #23	LARGE2 (ENSG00000165905) #24	PHF21A (ENSG00000135365) #25	CREB3L1 (ENSG00000157613) #27	DGKZ (ENSG00000149091) #28	MDK (ENSG00000110492) #29	CHRM4 (ENSG00000180720) #30	AMBRA1 (ENSG00000110497) #31	HARBI1 (ENSG00000180423) #32	ATG13 (ENSG00000175224) #33	ARHGAP1 (ENSG00000175220) #34	ZNF408 (ENSG00000175213) #35	F2 (ENSG00000180210) #36	CKAP5 (ENSG00000175216) #37
Gorilla	MODERN SPECIES	2	ALKBH3 (ENSGGOG00000001931)	ENSGGOG00000007196	ENSGGOG00000001934	ACCSL (ENSGGOG00000004173) #8	ACCS (ENSGGOG00000003124)	EXT2 (ENSGGOG00000010737) #9	ALX4 (ENSGGOG00000014265) #10	CD82 (ENSGGOG00000010189) #12	TSPAN18 (ENSGGOG00000006952) #13	ENSGGOG00000006941 #14	PRDM11 (ENSGGOG00000017094) #16	SYT13 (ENSGGOG00000017096) #17	ENSGGOG00000014803 #19	SLC35C1 (ENSGGOG00000001327) #20	CRY2 (ENSGGOG00000002293) #21	ENSGGOG00000002296 #22	FREY1 (ENSGGOG00000027882)	PEX16 (ENSGGOG00000002298) #23	LARGE2 (ENSGGOG00000002302) #24	PHF21A (ENSGGOG00000002304) #25	CREB3L1 (ENSGGOG00000015181) #27	DGKZ (ENSGGOG00000011849) #28	MDK (ENSGGOG00000011872) #29	CHRM4 (ENSGGOG00000026871) #30	AMBRA1 (ENSGGOG00000011880) #31	HARBI1 (ENSGGOG00000004410) #32	ATG13 (ENSGGOG00000005689) #33	ARHGAP1 (ENSGGOG00000005697) #34	ZNF408 (ENSGGOG00000010152) #35	F2 (ENSGGOG00000006967) #36	CKAP5 (ENSGGOG00000006980) #37
Orangutan	MODERN SPECIES	2	HSD17B12 (ENSPPYG00000003343)	ALKBH3 (ENSPPYG00000003342)	ENSPPYG00000003341	ACCSL (ENSPPYG00000003340) #8	ACCS (ENSPPYG00000003339)	EXT2 (ENSPPYG00000003338) #9	ALX4 (ENSPPYG00000003337) #10	CD82 (ENSPPYG00000003336) #12	TSPAN18 (ENSPPYG00000003335) #13	TP53I11 (ENSPPYG00000003334) #14	PRDM11 (ENSPPYG00000036125) #16	SYT13 (ENSPPYG00000033572) #17	CHST1 (ENSPPYG00000031467) #18	SLC35C1 (ENSPPYG00000032339) #20	CRY2 (ENSPPYG00000003329) #21	MAPK8IP1 (ENSPPYG00000003328) #22	FREY1 (ENSPPYG00000041330)	PEX16 (ENSPPYG00000003327) #23	LARGE2 (ENSPPYG00000003326) #24	PHF21A (ENSPPYG00000003325) #25	CREB3L1 (ENSPPYG00000003324) #27	DGKZ (ENSPPYG00000003323) #28	ENSPPYG00000038515 #29	CHRM4 (ENSPPYG00000029365) #30	AMBRA1 (ENSPPYG00000003322) #31	HARBI1 (ENSPPYG00000003321) #32	ATG13 (ENSPPYG00000003320) #33	ARHGAP1 (ENSPPYG00000003319) #34	ZNF408 (ENSPPYG00000003318) #35	F2 (ENSPPYG00000003317) #36	CKAP5 (ENSPPYG00000003316) #37
Platyrrhini	ANCESTRAL SPECIES	3	ENSGT00940000157226	ENSGT00390000016821	ENSGT00950000183070.a.b.g.b.a	ENSGT00940000162841.c.a #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b.n.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Cebidae	ANCESTRAL SPECIES		ENSGT00940000157226	ENSGT00390000016821	ENSGT00950000183070.a.b.g.b.a	ENSGT00940000162841.c.a #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b.n.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Cebidae_a	ANCESTRAL SPECIES	10	ENSGT00940000157226	ENSGT00390000016821	ENSGT00950000183070.a.b.g.b.a	ENSGT00940000162841.c.a #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b.n.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Capuchin	MODERN SPECIES	58	C11orf96 (ENSCCAG00000006365)	ACCSL (ENSCCAG00000037654) #8	ACCS (ENSCCAG00000034085)	EXT2 (ENSCCAG00000033740) #9	ALX4 (ENSCCAG00000029037) #10	ENSCCAG00000020098	ENSCCAG00000030210	CD82 (ENSCCAG00000037197) #12	TSPAN18 (ENSCCAG00000025852) #13	TP53I11 (ENSCCAG00000035507) #14	PRDM11 (ENSCCAG00000028556) #16	SYT13 (ENSCCAG00000033600) #17	CHST1 (ENSCCAG00000009268) #18	SLC35C1 (ENSCCAG00000026564) #20	CRY2 (ENSCCAG00000021672) #21	MAPK8IP1 (ENSCCAG00000020551) #22	C11orf94 (ENSCCAG00000021208)	PEX16 (ENSCCAG00000030937) #23	LARGE2 (ENSCCAG00000022292) #24	PHF21A (ENSCCAG00000031643) #25	ENSCCAG00000032167	CREB3L1 (ENSCCAG00000036096) #27	DGKZ (ENSCCAG00000027153) #28	ENSCCAG00000030225 #29	CHRM4 (ENSCCAG00000016622) #30	AMBRA1 (ENSCCAG00000036631) #31	HARBI1 (ENSCCAG00000033538) #32	ATG13 (ENSCCAG00000033415) #33	ARHGAP1 (ENSCCAG00000005865) #34	ZNF408 (ENSCCAG00000029472) #35	F2 (ENSCCAG00000028699) #36
Bolivian squirrel monkey	MODERN SPECIES	42	ALKBH3 (ENSSBOG00000023947)	C11orf96 (ENSSBOG00000012454)	ENSSBOG00000024546	ENSSBOG00000020375 #8	ACCS (ENSSBOG00000025833)	EXT2 (ENSSBOG00000012532) #9	ALX4 (ENSSBOG00000032868) #10	CD82 (ENSSBOG00000029660) #12	TSPAN18 (ENSSBOG00000032945) #13	TP53I11 (ENSSBOG00000028120) #14	PRDM11 (ENSSBOG00000000613) #16	SYT13 (ENSSBOG00000026952) #17	CHST1 (ENSSBOG00000018516) #18	SLC35C1 (ENSSBOG00000031356) #20	CRY2 (ENSSBOG00000028749) #21	MAPK8IP1 (ENSSBOG00000021861) #22	FREY1 (ENSSBOG00000032977)	PEX16 (ENSSBOG00000001635) #23	LARGE2 (ENSSBOG00000024444) #24	PHF21A (ENSSBOG00000026213) #25	CREB3L1 (ENSSBOG00000026826) #27	DGKZ (ENSSBOG00000028666) #28	ENSSBOG00000025813	CHRM4 (ENSSBOG00000015294) #30	AMBRA1 (ENSSBOG00000021917) #31	HARBI1 (ENSSBOG00000025915) #32	ATG13 (ENSSBOG00000009657) #33	ARHGAP1 (ENSSBOG00000032970) #34	ZNF408 (ENSSBOG00000033023) #35	F2 (ENSSBOG00000020779) #36	CKAP5 (ENSSBOG00000031735) #37
Marmoset	MODERN SPECIES	2	HSD17B12 (ENSCJAG00000011325)	ALKBH3 (ENSCJAG00000011353)	C11orf96 (ENSCJAG00000041387)	ENSCJAG00000011384 #8	ACCS (ENSCJAG00000011398)	EXT2 (ENSCJAG00000011414) #9	ALX4 (ENSCJAG00000011438) #10	CD82 (ENSCJAG00000011453) #12	TSPAN18 (ENSCJAG00000011479) #13	TP53I11 (ENSCJAG00000011462) #14	PRDM11 (ENSCJAG00000011508) #16	SYT13 (ENSCJAG00000038216) #17	CHST1 (ENSCJAG00000011537) #18	SLC35C1 (ENSCJAG00000011547) #20	CRY2 (ENSCJAG00000011551) #21	MAPK8IP1 (ENSCJAG00000011571) #22	FREY1 (ENSCJAG00000011591)	PEX16 (ENSCJAG00000011594) #23	ENSCJAG00000078830	LARGE2 (ENSCJAG00000011627) #24	PHF21A (ENSCJAG00000011670) #25	ENSCJAG00000051468	CREB3L1 (ENSCJAG00000011726) #27	DGKZ (ENSCJAG00000011773) #28	ENSCJAG00000011852 #29	CHRM4 (ENSCJAG00000011861) #30	AMBRA1 (ENSCJAG00000002155) #31	HARBI1 (ENSCJAG00000046232) #32	ATG13 (ENSCJAG00000019823) #33	ARHGAP1 (ENSCJAG00000019849) #34	ZNF408 (ENSCJAG00000019859) #35
Mas night monkey	MODERN SPECIES	349	ENSANAG00000032918	ENSANAG00000021583	ACCSL (ENSANAG00000038530) #8	ACCS (ENSANAG00000023624)	EXT2 (ENSANAG00000027569) #9	ALX4 (ENSANAG00000028117) #10	CD82 (ENSANAG00000036520) #12	TSPAN18 (ENSANAG00000027315) #13	TP53I11 (ENSANAG00000031078) #14	PRDM11 (ENSANAG00000038312) #16	SYT13 (ENSANAG00000038476) #17	ENSANAG00000000306	CHST1 (ENSANAG00000020142) #18	SLC35C1 (ENSANAG00000036877) #20	CRY2 (ENSANAG00000028154) #21	MAPK8IP1 (ENSANAG00000023346) #22	FREY1 (ENSANAG00000023251)	PEX16 (ENSANAG00000024741) #23	LARGE2 (ENSANAG00000024552) #24	PHF21A (ENSANAG00000033662) #25	ENSANAG00000034457	CREB3L1 (ENSANAG00000023783) #27	DGKZ (ENSANAG00000023123) #28	ENSANAG00000030861 #29	CHRM4 (ENSANAG00000007361) #30	AMBRA1 (ENSANAG00000037577) #31	HARBI1 (ENSANAG00000038532) #32	ATG13 (ENSANAG00000036615) #33	ARHGAP1 (ENSANAG00000038289) #34	ZNF408 (ENSANAG00000036294) #35	F2 (ENSANAG00000036904) #36
Tarsier	MODERN SPECIES	2515														TMEM123 (ENSTSYG00000034923)	CRY2 (ENSTSYG00000013868) #21	MAPK8IP1 (ENSTSYG00000026119) #22	CUNH11orf94 (ENSTSYG00000027069)	PEX16 (ENSTSYG00000031372) #23	LARGE2 (ENSTSYG00000012998) #24	PHF21A (ENSTSYG00000013029) #25
Strepsirrhini	ANCESTRAL SPECIES	6	ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Lemuriformes	ANCESTRAL SPECIES	16	ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315.i.b #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Lemuriformes_a	ANCESTRAL SPECIES	75	ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315.i.b #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Greater bamboo lemur	MODERN SPECIES	653	HSD17B12 (ENSPSMG00000011395)	ALKBH3 (ENSPSMG00000011436)	C11orf96 (ENSPSMG00000011448)	ACCSL (ENSPSMG00000011452) #8	ACCS (ENSPSMG00000011499)	EXT2 (ENSPSMG00000011571) #9	ALX4 (ENSPSMG00000011596) #10	CD82 (ENSPSMG00000011626) #12	TSPAN18 (ENSPSMG00000011657) #13	TP53I11 (ENSPSMG00000011679) #14	PRDM11 (ENSPSMG00000011702) #16	SYT13 (ENSPSMG00000011718) #17	CHST1 (ENSPSMG00000011726) #18	ENSPSMG00000011737 #20	CRY2 (ENSPSMG00000011764) #21	MAPK8IP1 (ENSPSMG00000011822) #22	FREY1 (ENSPSMG00000011844)	PEX16 (ENSPSMG00000011863) #23	LARGE2 (ENSPSMG00000011890) #24	PHF21A (ENSPSMG00000012023) #25	ENSPSMG00000012083	CREB3L1 (ENSPSMG00000012117) #27	DGKZ (ENSPSMG00000012472) #28	MDK (ENSPSMG00000012582) #29	CHRM4 (ENSPSMG00000012597) #30	AMBRA1 (ENSPSMG00000012734) #31	HARBI1 (ENSPSMG00000012785) #32	ATG13 (ENSPSMG00000012974) #33	ARHGAP1 (ENSPSMG00000013070) #34	ZNF408 (ENSPSMG00000013083) #35	F2 (ENSPSMG00000013119) #36
Coquerels sifaka	MODERN SPECIES	328										TSPAN18 (ENSPCOG00000019792) #13	TP53I11 (ENSPCOG00000012315) #14	PRDM11 (ENSPCOG00000000158) #16	SYT13 (ENSPCOG00000023291) #17	SLC35C1 (ENSPCOG00000024924) #20	CRY2 (ENSPCOG00000028836) #21	MAPK8IP1 (ENSPCOG00000004558) #22	FREY1 (ENSPCOG00000010411)	PEX16 (ENSPCOG00000015220) #23	LARGE2 (ENSPCOG00000000893) #24	PHF21A (ENSPCOG00000005609) #25	CREB3L1 (ENSPCOG00000025289) #27	DGKZ (ENSPCOG00000026865) #28	MDK (ENSPCOG00000017622) #29	CHRM4 (ENSPCOG00000013773) #30	AMBRA1 (ENSPCOG00000028231) #31	HARBI1 (ENSPCOG00000027989) #32	ATG13 (ENSPCOG00000023763) #33	ARHGAP1 (ENSPCOG00000020308) #34	ZNF408 (ENSPCOG00000028698) #35	F2 (ENSPCOG00000018345) #36	CKAP5 (ENSPCOG00000017517) #37
Mouse lemur	MODERN SPECIES	27	C11orf96 (ENSMICG00000041610)	ENSMICG00000034539	ACCSL (ENSMICG00000014661) #8	ACCS (ENSMICG00000007981)	ENSMICG00000028094	EXT2 (ENSMICG00000014680) #9	ALX4 (ENSMICG00000048133) #10	CD82 (ENSMICG00000010264) #12	TSPAN18 (ENSMICG00000006504) #13	TP53I11 (ENSMICG00000033784) #14	PRDM11 (ENSMICG00000014133) #16	SYT13 (ENSMICG00000029048) #17	CHST1 (ENSMICG00000037424) #18	SLC35C1 (ENSMICG00000014174) #20	CRY2 (ENSMICG00000014177) #21	MAPK8IP1 (ENSMICG00000014190) #22	FREY1 (ENSMICG00000042017)	PEX16 (ENSMICG00000014206) #23	LARGE2 (ENSMICG00000014226) #24	PHF21A (ENSMICG00000014259) #25	CREB3L1 (ENSMICG00000006853) #27	DGKZ (ENSMICG00000006865) #28	MDK (ENSMICG00000006889) #29	CHRM4 (ENSMICG00000042428) #30	AMBRA1 (ENSMICG00000006891) #31	HARBI1 (ENSMICG00000029266) #32	ATG13 (ENSMICG00000006905) #33	ARHGAP1 (ENSMICG00000006918) #34	ZNF408 (ENSMICG00000045320) #35	F2 (ENSMICG00000006934) #36	CKAP5 (ENSMICG00000006951) #37
Bushbaby	MODERN SPECIES	116	ENSOGAG00000028628	ENSOGAG00000013452 #8	ACCS (ENSOGAG00000013457)	EXT2 (ENSOGAG00000013459) #9	ENSOGAG00000029737	ALX4 (ENSOGAG00000034351) #10	CD82 (ENSOGAG00000015627) #12	TSPAN18 (ENSOGAG00000015266) #13	TP53I11 (ENSOGAG00000015257) #14	ENSOGAG00000004585 #16	SYT13 (ENSOGAG00000004588) #17	ENSOGAG00000034921	CHST1 (ENSOGAG00000025459) #18	SLC35C1 (ENSOGAG00000029726) #20	CRY2 (ENSOGAG00000012553) #21	MAPK8IP1 (ENSOGAG00000012556) #22	FREY1 (ENSOGAG00000034239)	PEX16 (ENSOGAG00000012559) #23	LARGE2 (ENSOGAG00000012560) #24	PHF21A (ENSOGAG00000012563) #25	ENSOGAG00000027200	CREB3L1 (ENSOGAG00000008829) #27	DGKZ (ENSOGAG00000002350) #28	MDK (ENSOGAG00000002353) #29	CHRM4 (ENSOGAG00000033812) #30	AMBRA1 (ENSOGAG00000002355) #31	ENSOGAG00000033750	HARBI1 (ENSOGAG00000004554) #32	ATG13 (ENSOGAG00000004547) #33	ARHGAP1 (ENSOGAG00000014288) #34	ZNF408 (ENSOGAG00000034080) #35
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Tree shrew	MODERN SPECIES	928																MAPK8IP1 (ENSTBEG00000014701) #22	ENSTBEG00000014869 #23	ENSTBEG00000015132 #24	PHF21A (ENSTBEG00000015434) #25
Glires	ANCESTRAL SPECIES	1	ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Lagomorpha	ANCESTRAL SPECIES	4	ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000164059	ENSGT00390000014757 #37	ENSGT00940000158287	ENSGT00390000012935
Pika	MODERN SPECIES	674															ENSOPRG00000009369 #21	ENSOPRG00000009395 #22	ENSOPRG00000009435 #23
Rabbit	MODERN SPECIES		TTC17 (ENSOCUG00000014674)	HSD17B12 (ENSOCUG00000016351)	ALKBH3 (ENSOCUG00000016359)	C11orf96 (ENSOCUG00000021313)	ACCSL (ENSOCUG00000007146) #8	EXT2 (ENSOCUG00000007361) #9	ALX4 (ENSOCUG00000007369) #10	CD82 (ENSOCUG00000000861) #12	ENSOCUG00000023681 #13	TP53I11 (ENSOCUG00000001307) #14	PRDM11 (ENSOCUG00000027797) #16	SYT13 (ENSOCUG00000005321) #17	CHST1 (ENSOCUG00000006596) #18	SLC35C1 (ENSOCUG00000015335) #20	CRY2 (ENSOCUG00000025433) #21	ENSOCUG00000023020 #22	PEX16 (ENSOCUG00000001670) #23	LARGE2 (ENSOCUG00000001671) #24	PHF21A (ENSOCUG00000001675) #25	CREB3L1 (ENSOCUG00000004418) #27	ENSOCUG00000024752 #28	CHRM4 (ENSOCUG00000021064) #30	AMBRA1 (ENSOCUG00000016117) #31	HARBI1 (ENSOCUG00000016137) #32	ATG13 (ENSOCUG00000016144) #33	ARHGAP1 (ENSOCUG00000016160) #34	ZNF408 (ENSOCUG00000010953) #35	CKAP5 (ENSOCUG00000016200) #37	LRP4 (ENSOCUG00000002052)	CSTPP1 (ENSOCUG00000002066)	ENSOCUG00000002073
Rodentia	ANCESTRAL SPECIES	1	ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT01100000264486	ENSGT00940000159848 #27	ENSGT00860000136066	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35
Rodentia_B	ANCESTRAL SPECIES	5	ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT01100000264486	ENSGT00940000159848 #27	ENSGT00860000136066	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35
Myomorpha	ANCESTRAL SPECIES	4	ENSGT00940000154860	ENSGT00940000157226.f	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00860000136066	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36
Muroidea	ANCESTRAL SPECIES	2	ENSGT00940000154860	ENSGT00940000157226.f	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00860000136066	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00940000154860	ENSGT00940000157226.f	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00860000136066	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36
Cricetidae	ANCESTRAL SPECIES	5	ENSGT00940000154860	ENSGT00940000157226.f	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00860000136066	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36
Cricetidae_B	ANCESTRAL SPECIES	34	ENSGT00940000154860	ENSGT00940000157226.f	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Northern American deer mouse	MODERN SPECIES	17	Hsd17b12 (ENSPEMG00000019400)	Alkbh3 (ENSPEMG00000019372)	Gm13889 (ENSPEMG00000025209)	Accs (ENSPEMG00000016421)	Ext2 (ENSPEMG00000022691) #9	Alx4 (ENSPEMG00000022456) #10	Cd82 (ENSPEMG00000014649) #12	Tspan18 (ENSPEMG00000028780) #13	Trp53i11 (ENSPEMG00000028703) #14	ENSPEMG00000031347 #16	ENSPEMG00000025900	Syt13 (ENSPEMG00000000686) #17	Chst1 (ENSPEMG00000023266) #18	Slc35c1 (ENSPEMG00000027919) #20	Cry2 (ENSPEMG00000018313) #21	Mapk8ip1 (ENSPEMG00000019088) #22	Frey1 (ENSPEMG00000018435)	Pex16 (ENSPEMG00000008055) #23	Large2 (ENSPEMG00000013026) #24	Phf21a (ENSPEMG00000004446) #25	Creb3l1 (ENSPEMG00000019031) #27	Dgkz (ENSPEMG00000009628) #28	Mdk (ENSPEMG00000014123) #29	Chrm4 (ENSPEMG00000028345) #30	Ambra1 (ENSPEMG00000005111) #31	ENSPEMG00000025318	Harbi1 (ENSPEMG00000013606) #32	Atg13 (ENSPEMG00000017021) #33	Arhgap1 (ENSPEMG00000011370) #34	Zfp408 (ENSPEMG00000016757) #35	F2 (ENSPEMG00000018118) #36
Prairie vole	MODERN SPECIES	81	Alkbh3 (ENSMOCG00000012816)	ENSMOCG00000010059	Accsl (ENSMOCG00000009949) #8	Accs (ENSMOCG00000015335)	Ext2 (ENSMOCG00000018938) #9	Alx4 (ENSMOCG00000004542) #10	Cd82 (ENSMOCG00000016145) #12	Tspan18 (ENSMOCG00000022221) #13	Trp53i11 (ENSMOCG00000022849) #14	ENSMOCG00000019982 #16	Syt13 (ENSMOCG00000013286) #17	Chst1 (ENSMOCG00000013785) #18	ENSMOCG00000015940	Slc35c1 (ENSMOCG00000000842) #20	ENSMOCG00000001841 #21	Mapk8ip1 (ENSMOCG00000007285) #22	Frey1 (ENSMOCG00000012907)	Pex16 (ENSMOCG00000015385) #23	Large2 (ENSMOCG00000004366) #24	Phf21a (ENSMOCG00000018126) #25	Creb3l1 (ENSMOCG00000012802) #27	Dgkz (ENSMOCG00000000694) #28	Mdk (ENSMOCG00000014474) #29	Chrm4 (ENSMOCG00000016103) #30	Ambra1 (ENSMOCG00000018792) #31	ENSMOCG00000007253	Atg13 (ENSMOCG00000018209) #33	Arhgap1 (ENSMOCG00000008533) #34	F2 (ENSMOCG00000019585) #36	Ckap5 (ENSMOCG00000022214) #37	Lrp4 (ENSMOCG00000005823)
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00390000006196	ENSGT00940000154860	ENSGT00940000157226.f	ENSGT00390000016821	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00860000136066	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36
Golden Hamster	MODERN SPECIES	618	ENSMAUG00000008950	Ttc17 (ENSMAUG00000010822)	Hsd17b12 (ENSMAUG00000011836)	Alkbh3 (ENSMAUG00000009317)	ENSMAUG00000010918	Accs (ENSMAUG00000007912)	Ext2 (ENSMAUG00000009741) #9	Alx4 (ENSMAUG00000002663) #10	Cd82 (ENSMAUG00000003346) #12	Tspan18 (ENSMAUG00000003687) #13	Trp53i11 (ENSMAUG00000010266) #14	ENSMAUG00000010059 #16	Syt13 (ENSMAUG00000013295) #17	Chst1 (ENSMAUG00000011799) #18	Cry2 (ENSMAUG00000004486) #21	Mapk8ip1 (ENSMAUG00000005802) #22	Frey1 (ENSMAUG00000006630)	Pex16 (ENSMAUG00000011878) #23	Large2 (ENSMAUG00000008548) #24	Phf21a (ENSMAUG00000011351) #25	Creb3l1 (ENSMAUG00000003224) #27	Dgkz (ENSMAUG00000008433) #28	Mdk (ENSMAUG00000006759) #29	Chrm4 (ENSMAUG00000007510) #30	Ambra1 (ENSMAUG00000008821) #31	Harbi1 (ENSMAUG00000012193) #32	Atg13 (ENSMAUG00000011052) #33	Arhgap1 (ENSMAUG00000012048) #34	F2 (ENSMAUG00000009414) #36	Ckap5 (ENSMAUG00000012944) #37	Lrp4 (ENSMAUG00000016435)
Chinese hamster chok1gshd	MODERN SPECIES	188	Ttc17 (ENSCGRG00001008891)	Hsd17b12 (ENSCGRG00001024805)	Alkbh3 (ENSCGRG00001014489)	Gm13889 (ENSCGRG00001015067)	Accs (ENSCGRG00001017403)	Ext2 (ENSCGRG00001018610) #9	Alx4 (ENSCGRG00001013158) #10	Cd82 (ENSCGRG00001014213) #12	Tspan18 (ENSCGRG00001014966) #13	Trp53i11 (ENSCGRG00001015881) #14	ENSCGRG00001016971 #16	Syt13 (ENSCGRG00001017740) #17	Chst1 (ENSCGRG00001010952) #18	Slc35c1 (ENSCGRG00001019726) #20	Cry2 (ENSCGRG00001020400) #21	Mapk8ip1 (ENSCGRG00001016399) #22	Frey1 (ENSCGRG00001017596)	Pex16 (ENSCGRG00001024899) #23	Large2 (ENSCGRG00001001247) #24	Phf21a (ENSCGRG00001007974) #25	Creb3l1 (ENSCGRG00001011598) #27	Dgkz (ENSCGRG00001021082) #28	ENSCGRG00001011874	Mdk (ENSCGRG00001022566) #29	Chrm4 (ENSCGRG00001012019) #30	Ambra1 (ENSCGRG00001020313) #31	Harbi1 (ENSCGRG00001021313) #32	Atg13 (ENSCGRG00001022112) #33	ENSCGRG00001022859	Arhgap1 (ENSCGRG00001023260) #34	Zfp408 (ENSCGRG00001023588) #35
Murinae	ANCESTRAL SPECIES	1	ENSGT00940000154860	ENSGT00940000157226.f	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00860000136066	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36
Mus	ANCESTRAL SPECIES	1	ENSGT00940000157226.e	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00860000136063	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00860000136066	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36
Mus_A	ANCESTRAL SPECIES		ENSGT00940000157226.e	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00860000136063	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00860000136066	ENSGT00940000156152 #28	ENSGT00390000007640.b.g #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36
Mus_B	ANCESTRAL SPECIES	1	ENSGT00940000157226.e	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00860000136063	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00860000136066	ENSGT00940000156152 #28	ENSGT00390000007640.b.g #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36
Mus_C	ANCESTRAL SPECIES		ENSGT00940000157226.e	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00860000136063	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00860000136066	ENSGT00940000156152 #28	ENSGT00390000007640.b.g #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36
spretus	MODERN SPECIES	11	MGP_SPRETEiJ_G0024904	Gm13889 (MGP_SPRETEiJ_G0024903)	Accsl (MGP_SPRETEiJ_G0024902) #8	Accs (MGP_SPRETEiJ_G0024901)	Ext2 (MGP_SPRETEiJ_G0024900) #9	Alx4 (MGP_SPRETEiJ_G0024899) #10	MGP_SPRETEiJ_G0024898	Cd82 (MGP_SPRETEiJ_G0024897) #12	Tspan18 (MGP_SPRETEiJ_G0024896) #13	Trp53i11 (MGP_SPRETEiJ_G0024895) #14	MGP_SPRETEiJ_G0024894 #16	Syt13 (MGP_SPRETEiJ_G0024893) #17	Chst1 (MGP_SPRETEiJ_G0024892) #18	Slc35c1 (MGP_SPRETEiJ_G0024891) #20	Cry2 (MGP_SPRETEiJ_G0024890) #21	Mapk8ip1 (MGP_SPRETEiJ_G0024889) #22	Frey1 (MGP_SPRETEiJ_G0024888)	Pex16 (MGP_SPRETEiJ_G0024887) #23	Large2 (MGP_SPRETEiJ_G0024886) #24	Phf21a (MGP_SPRETEiJ_G0024885) #25	Creb3l1 (MGP_SPRETEiJ_G0024884) #27	MGP_SPRETEiJ_G0024883	Dgkz (MGP_SPRETEiJ_G0024882) #28	Mdk (MGP_SPRETEiJ_G0024881) #29	Chrm4 (MGP_SPRETEiJ_G0024880) #30	Ambra1 (MGP_SPRETEiJ_G0024879) #31	Harbi1 (MGP_SPRETEiJ_G0024878) #32	Atg13 (MGP_SPRETEiJ_G0024877) #33	Arhgap1 (MGP_SPRETEiJ_G0024876) #34	Zfp408 (MGP_SPRETEiJ_G0024875) #35	F2 (MGP_SPRETEiJ_G0024874) #36
Steppe mouse	MODERN SPECIES	36	Accsl (ENSMSIG00000018045) #8	Ext2 (ENSMSIG00000018155) #9	Alx4 (ENSMSIG00000018194) #10	ENSMSIG00000018210	ENSMSIG00000018226	Cd82 (ENSMSIG00000018232) #12	Tspan18 (ENSMSIG00000018260) #13	ENSMSIG00000018279 #14	Prdm11 (ENSMSIG00000018308) #16	ENSMSIG00000018406	Syt13 (ENSMSIG00000018415) #17	Chst1 (ENSMSIG00000018432) #18	ENSMSIG00000018438	Slc35c1 (ENSMSIG00000018455) #20	Cry2 (ENSMSIG00000018499) #21	Mapk8ip1 (ENSMSIG00000018534) #22	Frey1 (ENSMSIG00000018641)	Pex16 (ENSMSIG00000018650) #23	Large2 (ENSMSIG00000018698) #24	Phf21a (ENSMSIG00000018990) #25	Creb3l1 (ENSMSIG00000019325) #27	Dgkz (ENSMSIG00000019366) #28	ENSMSIG00000019782	Mdk (ENSMSIG00000019785) #29	Chrm4 (ENSMSIG00000019816) #30	Ambra1 (ENSMSIG00000019820) #31	Harbi1 (ENSMSIG00000019911) #32	Atg13 (ENSMSIG00000019915) #33	Arhgap1 (ENSMSIG00000020000) #34	Zfp408 (ENSMSIG00000020068) #35	F2 (ENSMSIG00000020083) #36
Mouse	MODERN SPECIES	11	Alkbh3 (ENSMUSG00000040174)	Gm27027 (ENSMUSG00000098004)	Gm13889 (ENSMUSG00000087006)	Accsl (ENSMUSG00000075023) #8	Accs (ENSMUSG00000040272)	Ext2 (ENSMUSG00000027198) #9	Alx4 (ENSMUSG00000040310) #10	Cd82 (ENSMUSG00000027215) #12	Tspan18 (ENSMUSG00000027217) #13	Trp53i11 (ENSMUSG00000068735) #14	Prdm11 (ENSMUSG00000075028) #16	Syt13 (ENSMUSG00000027220) #17	Chst1 (ENSMUSG00000027221) #18	Slc35c1 (ENSMUSG00000049922) #20	Cry2 (ENSMUSG00000068742) #21	Mapk8ip1 (ENSMUSG00000027223) #22	Frey1 (ENSMUSG00000044916)	Pex16 (ENSMUSG00000027222) #23	Large2 (ENSMUSG00000040434) #24	Phf21a (ENSMUSG00000058318) #25	Creb3l1 (ENSMUSG00000027230) #27	Dgkz (ENSMUSG00000040479) #28	Mdk (ENSMUSG00000027239) #29	Chrm4 (ENSMUSG00000040495) #30	Ambra1 (ENSMUSG00000040506) #31	Harbi1 (ENSMUSG00000027243) #32	Atg13 (ENSMUSG00000027244) #33	Arhgap1 (ENSMUSG00000027247) #34	Zfp408 (ENSMUSG00000075040) #35	F2 (ENSMUSG00000027249) #36	Ckap5 (ENSMUSG00000040549) #37
Ryukyu mouse	MODERN SPECIES	11	MGP_CAROLIEiJ_G0023994	Gm13889 (MGP_CAROLIEiJ_G0023993)	MGP_CAROLIEiJ_G0023992 #8	Accs (MGP_CAROLIEiJ_G0023991)	Ext2 (MGP_CAROLIEiJ_G0023990) #9	Alx4 (MGP_CAROLIEiJ_G0023989) #10	MGP_CAROLIEiJ_G0023988	Cd82 (MGP_CAROLIEiJ_G0023987) #12	Tspan18 (MGP_CAROLIEiJ_G0023986) #13	MGP_CAROLIEiJ_G0023985 #14	MGP_CAROLIEiJ_G0023984 #16	Syt13 (MGP_CAROLIEiJ_G0023983) #17	Chst1 (MGP_CAROLIEiJ_G0023982) #18	Slc35c1 (MGP_CAROLIEiJ_G0023981) #20	Cry2 (MGP_CAROLIEiJ_G0023980) #21	Mapk8ip1 (MGP_CAROLIEiJ_G0023979) #22	Frey1 (MGP_CAROLIEiJ_G0023978)	Pex16 (MGP_CAROLIEiJ_G0023977) #23	Large2 (MGP_CAROLIEiJ_G0023976) #24	Phf21a (MGP_CAROLIEiJ_G0023975) #25	Creb3l1 (MGP_CAROLIEiJ_G0023974) #27	MGP_CAROLIEiJ_G0023973	Dgkz (MGP_CAROLIEiJ_G0023972) #28	Mdk (MGP_CAROLIEiJ_G0023971) #29	Chrm4 (MGP_CAROLIEiJ_G0023970) #30	Ambra1 (MGP_CAROLIEiJ_G0023969) #31	Harbi1 (MGP_CAROLIEiJ_G0023968) #32	Atg13 (MGP_CAROLIEiJ_G0023967) #33	Arhgap1 (MGP_CAROLIEiJ_G0023966) #34	Zfp408 (MGP_CAROLIEiJ_G0023965) #35	F2 (MGP_CAROLIEiJ_G0023964) #36
Shrew mouse	MODERN SPECIES	16	Alkbh3 (MGP_PahariEiJ_G0025431)	MGP_PahariEiJ_G0025430	Gm13889 (MGP_PahariEiJ_G0025429)	Accsl (MGP_PahariEiJ_G0025428) #8	Accs (MGP_PahariEiJ_G0025427)	Ext2 (MGP_PahariEiJ_G0025426) #9	Alx4 (MGP_PahariEiJ_G0025425) #10	MGP_PahariEiJ_G0025424	Cd82 (MGP_PahariEiJ_G0025423) #12	Tspan18 (MGP_PahariEiJ_G0025422) #13	Trp53i11 (MGP_PahariEiJ_G0025421) #14	MGP_PahariEiJ_G0025420 #16	Syt13 (MGP_PahariEiJ_G0025419) #17	Chst1 (MGP_PahariEiJ_G0025418) #18	Cry2 (MGP_PahariEiJ_G0025417) #21	Mapk8ip1 (MGP_PahariEiJ_G0025416) #22	Frey1 (MGP_PahariEiJ_G0025415)	Pex16 (MGP_PahariEiJ_G0025414) #23	Large2 (MGP_PahariEiJ_G0025413) #24	Phf21a (MGP_PahariEiJ_G0025412) #25	Creb3l1 (MGP_PahariEiJ_G0025411) #27	MGP_PahariEiJ_G0025410	Dgkz (MGP_PahariEiJ_G0025409) #28	Mdk (MGP_PahariEiJ_G0025408) #29	Chrm4 (MGP_PahariEiJ_G0025407) #30	Ambra1 (MGP_PahariEiJ_G0025406) #31	Harbi1 (MGP_PahariEiJ_G0025405) #32	Atg13 (MGP_PahariEiJ_G0025404) #33	Arhgap1 (MGP_PahariEiJ_G0025403) #34	Zfp408 (MGP_PahariEiJ_G0025402) #35	F2 (MGP_PahariEiJ_G0025401) #36
Rat	MODERN SPECIES	13	Alkbh3 (ENSRNOG00000021678)	RGD1564664 (ENSRNOG00000055564)	Accsl (ENSRNOG00000042533) #8	Accs (ENSRNOG00000009199)	Ext2 (ENSRNOG00000008944) #9	Alx4 (ENSRNOG00000000008) #10	Cd82 (ENSRNOG00000000047) #12	Tspan18 (ENSRNOG00000008758) #13	Tp53i11 (ENSRNOG00000008738) #14	ENSRNOG00000068495	Prdm11 (ENSRNOG00000008674) #16	Syt13 (ENSRNOG00000008000) #17	Chst1 (ENSRNOG00000007989) #18	Slc35c1 (ENSRNOG00000007732) #20	Cry2 (ENSRNOG00000007478) #21	Mapk8ip1 (ENSRNOG00000058478) #22	Frey1 (ENSRNOG00000006884)	Pex16 (ENSRNOG00000006539) #23	Large2 (ENSRNOG00000006353) #24	Phf21a (ENSRNOG00000006063) #25	Creb3l1 (ENSRNOG00000005413) #27	Dgkz (ENSRNOG00000017737) #28	Mdk (ENSRNOG00000017560) #29	Chrm4 (ENSRNOG00000017556) #30	Ambra1 (ENSRNOG00000017422) #31	Atg13 (ENSRNOG00000016984) #33	Arhgap1 (ENSRNOG00000016610) #34	ENSRNOG00000070459 #35	F2 (ENSRNOG00000016325) #36	Ckap5 (ENSRNOG00000016067) #37	Lrp4 (ENSRNOG00000015285)
Upper Galilee mountains blind mole rat	MODERN SPECIES	871														Slc35c1 (ENSNGAG00000000960) #20	Cry2 (ENSNGAG00000002383) #21	Mapk8ip1 (ENSNGAG00000011626) #22	Frey1 (ENSNGAG00000016997)	Pex16 (ENSNGAG00000020802) #23	Large2 (ENSNGAG00000019218) #24	Phf21a (ENSNGAG00000014772) #25
Lesser Egyptian jerboa	MODERN SPECIES	62	0610010K14Rik (ENSJJAG00000018786)	Rnasek (ENSJJAG00000018322)	Alox12 (ENSJJAG00000000399)	ENSJJAG00000008060	Pelp1 (ENSJJAG00000013033)	Ext2 (ENSJJAG00000003668) #9	Alx4 (ENSJJAG00000014358) #10	Cd82 (ENSJJAG00000010666) #12	Tspan18 (ENSJJAG00000009258) #13	Trp53i11 (ENSJJAG00000010306) #14	ENSJJAG00000020448 #16	Syt13 (ENSJJAG00000015391) #17	Chst1 (ENSJJAG00000009883) #18	Slc35c1 (ENSJJAG00000024143) #20	Cry2 (ENSJJAG00000023774) #21	Mapk8ip1 (ENSJJAG00000006389) #22	Frey1 (ENSJJAG00000020049)	Pex16 (ENSJJAG00000022973) #23	Large2 (ENSJJAG00000015799) #24	Phf21a (ENSJJAG00000016994) #25	Creb3l1 (ENSJJAG00000014152) #27	Dgkz (ENSJJAG00000003197) #28	Mdk (ENSJJAG00000023305) #29	Chrm4 (ENSJJAG00000010466) #30	Ambra1 (ENSJJAG00000004138) #31	ENSJJAG00000016975	ENSJJAG00000015195	Atg13 (ENSJJAG00000024173) #33	Arhgap1 (ENSJJAG00000022610) #34	Zfp408 (ENSJJAG00000015381) #35	F2 (ENSJJAG00000005619) #36
Kangaroo rat	MODERN SPECIES	444	Ttc17 (ENSDORG00000002398)	ENSDORG00000004834	Alkbh3 (ENSDORG00000000083)	ENSDORG00000004336	Accs (ENSDORG00000005063)	Ext2 (ENSDORG00000012848) #9	Alx4 (ENSDORG00000014002) #10	Cd82 (ENSDORG00000029810) #12	Tspan18 (ENSDORG00000004841) #13	Trp53i11 (ENSDORG00000024778) #14	ENSDORG00000029092 #16	Syt13 (ENSDORG00000005470) #17	Chst1 (ENSDORG00000025502) #18	Slc35c1 (ENSDORG00000027177) #20	Cry2 (ENSDORG00000015496) #21	Mapk8ip1 (ENSDORG00000015499) #22	Frey1 (ENSDORG00000024564)	Pex16 (ENSDORG00000015504) #23	Large2 (ENSDORG00000015507) #24	Phf21a (ENSDORG00000015508) #25	ENSDORG00000025559	Creb3l1 (ENSDORG00000023541) #27	ENSDORG00000028371	Dgkz (ENSDORG00000008377) #28	Mdk (ENSDORG00000029447) #29	Chrm4 (ENSDORG00000024984) #30	Ambra1 (ENSDORG00000008382) #31	ENSDORG00000028941	Atg13 (ENSDORG00000000382) #33	Arhgap1 (ENSDORG00000000385) #34	Zfp408 (ENSDORG00000000387) #35
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00860000136066	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36
Hystricomorpha	ANCESTRAL SPECIES	16	ENSGT00390000006196	ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00860000136066	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Hystricomorpha_a	ANCESTRAL SPECIES	12	ENSGT00390000006196	ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00860000136066	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Hystricomorpha_b	ANCESTRAL SPECIES	10	ENSGT00390000006196	ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00860000136066	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Long-tailed chinchilla	MODERN SPECIES	129	TTC17 (ENSCLAG00000012857)	HSD17B12 (ENSCLAG00000016216)	ALKBH3 (ENSCLAG00000016579)	C11orf96 (ENSCLAG00000018096)	EXT2 (ENSCLAG00000014428) #9	ALX4 (ENSCLAG00000013928) #10	CD82 (ENSCLAG00000013557) #12	TSPAN18 (ENSCLAG00000013370) #13	TP53I11 (ENSCLAG00000013412) #14	PRDM11 (ENSCLAG00000015369) #16	SYT13 (ENSCLAG00000014302) #17	CHST1 (ENSCLAG00000013459) #18	SLC35C1 (ENSCLAG00000013258) #20	CRY2 (ENSCLAG00000014719) #21	ENSCLAG00000014881	MAPK8IP1 (ENSCLAG00000014552) #22	PEX16 (ENSCLAG00000013695) #23	LARGE2 (ENSCLAG00000014846) #24	PHF21A (ENSCLAG00000016632) #25	CREB3L1 (ENSCLAG00000013609) #27	ENSCLAG00000014194	DGKZ (ENSCLAG00000016057) #28	MDK (ENSCLAG00000014462) #29	CHRM4 (ENSCLAG00000013251) #30	AMBRA1 (ENSCLAG00000015156) #31	HARBI1 (ENSCLAG00000013578) #32	ATG13 (ENSCLAG00000015328) #33	ARHGAP1 (ENSCLAG00000013542) #34	F2 (ENSCLAG00000015618) #36	CKAP5 (ENSCLAG00000015801) #37	LRP4 (ENSCLAG00000016159)
Degu	MODERN SPECIES	59	ENSODEG00000020538	ACCS (ENSODEG00000016512)	EXT2 (ENSODEG00000016764) #9	ALX4 (ENSODEG00000016139) #10	ENSODEG00000016065	ENSODEG00000020356	ENSODEG00000016115 #12	TSPAN18 (ENSODEG00000016609) #13	TP53I11 (ENSODEG00000016164) #14	ENSODEG00000015982	PRDM11 (ENSODEG00000016043) #16	SYT13 (ENSODEG00000016104) #17	CHST1 (ENSODEG00000020411) #18	SLC35C1 (ENSODEG00000016358) #20	CRY2 (ENSODEG00000016685) #21	MAPK8IP1 (ENSODEG00000016178) #22	FREY1 (ENSODEG00000016189)	PEX16 (ENSODEG00000016153) #23	LARGE2 (ENSODEG00000016208) #24	PHF21A (ENSODEG00000017531) #25	ENSODEG00000016543	ENSODEG00000016348	CREB3L1 (ENSODEG00000016017) #27	ENSODEG00000016039	ENSODEG00000016420 #28	DGKZ (ENSODEG00000016309) #28	MDK (ENSODEG00000015931) #29	CHRM4 (ENSODEG00000020352) #30	AMBRA1 (ENSODEG00000016633) #31	ENSODEG00000016339	ATG13 (ENSODEG00000017294) #33
Guinea pig	MODERN SPECIES	72	TTC17 (ENSCPOG00000013524)	HSD17B12 (ENSCPOG00000031159)	ALKBH3 (ENSCPOG00000005138)	C11orf96 (ENSCPOG00000027092)	ACCS (ENSCPOG00000011925)	EXT2 (ENSCPOG00000011931) #9	ALX4 (ENSCPOG00000022496) #10	CD82 (ENSCPOG00000026415) #12	TSPAN18 (ENSCPOG00000001959) #13	TP53I11 (ENSCPOG00000038980) #14	PRDM11 (ENSCPOG00000019447) #16	SYT13 (ENSCPOG00000008033) #17	CHST1 (ENSCPOG00000037376) #18	SLC35C1 (ENSCPOG00000037302) #20	CRY2 (ENSCPOG00000001296) #21	MAPK8IP1 (ENSCPOG00000001298) #22	FREY1 (ENSCPOG00000032012)	PEX16 (ENSCPOG00000027497) #23	LARGE2 (ENSCPOG00000033339) #24	PHF21A (ENSCPOG00000001299) #25	CREB3L1 (ENSCPOG00000010073) #27	DGKZ (ENSCPOG00000009636) #28	MDK (ENSCPOG00000007340) #29	CHRM4 (ENSCPOG00000020788) #30	AMBRA1 (ENSCPOG00000007341) #31	HARBI1 (ENSCPOG00000037304) #32	ATG13 (ENSCPOG00000013042) #33	ARHGAP1 (ENSCPOG00000013046) #34	F2 (ENSCPOG00000026682) #36	CKAP5 (ENSCPOG00000007054) #37	LRP4 (ENSCPOG00000007072)
Sciuridae	ANCESTRAL SPECIES	2	ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Marmotini	ANCESTRAL SPECIES	22	ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Marmotini_b	ANCESTRAL SPECIES	23	ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Arctic ground squirrel	MODERN SPECIES	208						EXT2 (ENSUPAG00010008690) #9	ALX4 (ENSUPAG00010008717) #10	CD82 (ENSUPAG00010008728) #12	TSPAN18 (ENSUPAG00010008743) #13	TP53I11 (ENSUPAG00010008764) #14	ENSUPAG00010008787 #16	SYT13 (ENSUPAG00010008795) #17	CHST1 (ENSUPAG00010008807) #18	SLC35C1 (ENSUPAG00010008815) #20	CRY2 (ENSUPAG00010008829) #21	MAPK8IP1 (ENSUPAG00010008856) #22	FREY1 (ENSUPAG00010008915)	PEX16 (ENSUPAG00010008926) #23	LARGE2 (ENSUPAG00010008955) #24	PHF21A (ENSUPAG00010009105) #25	CREB3L1 (ENSUPAG00010010194) #27	DGKZ (ENSUPAG00010010211) #28	MDK (ENSUPAG00010010379) #29	CHRM4 (ENSUPAG00010010417) #30	AMBRA1 (ENSUPAG00010010430) #31	HARBI1 (ENSUPAG00010010611) #32	ATG13 (ENSUPAG00010010621) #33	ARHGAP1 (ENSUPAG00010010696) #34	ZNF408 (ENSUPAG00010010704) #35	F2 (ENSUPAG00010010714) #36	CKAP5 (ENSUPAG00010010730) #37
Squirrel	MODERN SPECIES	162	C11orf96 (ENSSTOG00000030620)	ACCSL (ENSSTOG00000001158) #8	ENSSTOG00000033284	ENSSTOG00000004449	EXT2 (ENSSTOG00000004480) #9	ALX4 (ENSSTOG00000029078) #10	ENSSTOG00000023731 #12	TSPAN18 (ENSSTOG00000012343) #13	TP53I11 (ENSSTOG00000025635) #14	PRDM11 (ENSSTOG00000021186) #16	SYT13 (ENSSTOG00000004017) #17	CHST1 (ENSSTOG00000016359) #18	SLC35C1 (ENSSTOG00000022825) #20	CRY2 (ENSSTOG00000011521) #21	FREY1 (ENSSTOG00000027622)	MAPK8IP1 (ENSSTOG00000027362) #22	PEX16 (ENSSTOG00000011534) #23	LARGE2 (ENSSTOG00000011545) #24	PHF21A (ENSSTOG00000011552) #25	CREB3L1 (ENSSTOG00000012697) #27	DGKZ (ENSSTOG00000012704) #28	MDK (ENSSTOG00000027636) #29	CHRM4 (ENSSTOG00000022455) #30	AMBRA1 (ENSSTOG00000019411) #31	HARBI1 (ENSSTOG00000005072) #32	ATG13 (ENSSTOG00000005077) #33	ARHGAP1 (ENSSTOG00000026557) #34	ZNF408 (ENSSTOG00000005114) #35	F2 (ENSSTOG00000005130) #36	CKAP5 (ENSSTOG00000005158) #37	LRP4 (ENSSTOG00000005236)
Alpin marmot	MODERN SPECIES	3	ALKBH3 (ENSMMMG00000011630)	C11orf96 (ENSMMMG00000011645)	ACCSL (ENSMMMG00000011649) #8	ENSMMMG00000011721	ACCS (ENSMMMG00000011728)	EXT2 (ENSMMMG00000011786) #9	ALX4 (ENSMMMG00000011816) #10	ENSMMMG00000011823	TSPAN18 (ENSMMMG00000011835) #13	TP53I11 (ENSMMMG00000011860) #14	PRDM11 (ENSMMMG00000011883) #16	SYT13 (ENSMMMG00000011892) #17	CHST1 (ENSMMMG00000011917) #18	SLC35C1 (ENSMMMG00000011928) #20	CRY2 (ENSMMMG00000011931) #21	MAPK8IP1 (ENSMMMG00000011982) #22	FREY1 (ENSMMMG00000012302)	PEX16 (ENSMMMG00000012310) #23	LARGE2 (ENSMMMG00000012317) #24	PHF21A (ENSMMMG00000012404) #25	CREB3L1 (ENSMMMG00000013137) #27	DGKZ (ENSMMMG00000013155) #28	MDK (ENSMMMG00000013259) #29	CHRM4 (ENSMMMG00000013278) #30	AMBRA1 (ENSMMMG00000013284) #31	HARBI1 (ENSMMMG00000013860) #32	ATG13 (ENSMMMG00000013875) #33	ARHGAP1 (ENSMMMG00000013934) #34	ZNF408 (ENSMMMG00000013944) #35	F2 (ENSMMMG00000013961) #36	CKAP5 (ENSMMMG00000013993) #37
Eurasian red squirrel	MODERN SPECIES	2	ALKBH3 (ENSSVLG00005018027)	C11orf96 (ENSSVLG00005018003)	ACCSL (ENSSVLG00005017862) #8	ACCS (ENSSVLG00005017673)	EXT2 (ENSSVLG00005017472) #9	ALX4 (ENSSVLG00005017428) #10	ENSSVLG00005017405	CD82 (ENSSVLG00005017346) #12	TSPAN18 (ENSSVLG00005017248) #13	TP53I11 (ENSSVLG00005017174) #14	PRDM11 (ENSSVLG00005017126) #16	SYT13 (ENSSVLG00005017054) #17	CHST1 (ENSSVLG00005017036) #18	SLC35C1 (ENSSVLG00005016968) #20	CRY2 (ENSSVLG00005016727) #21	MAPK8IP1 (ENSSVLG00005016511) #22	FREY1 (ENSSVLG00005016461)	PEX16 (ENSSVLG00005016392) #23	LARGE2 (ENSSVLG00005016132) #24	PHF21A (ENSSVLG00005016012) #25	CREB3L1 (ENSSVLG00005015955) #27	ENSSVLG00005015926	DGKZ (ENSSVLG00005015887) #28	MDK (ENSSVLG00005015782) #29	CHRM4 (ENSSVLG00005015740) #30	AMBRA1 (ENSSVLG00005015569) #31	HARBI1 (ENSSVLG00005015510) #32	ENSSVLG00005014869 #33	ARHGAP1 (ENSSVLG00005014685) #34	F2 (ENSSVLG00005014116) #36	CKAP5 (ENSSVLG00005013939) #37
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00930000151992	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00910000148141	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36
Eulipotyphla	ANCESTRAL SPECIES	1304																ENSGT00940000157089.B #22	ENSGT00390000017790 #23
Common shrew	MODERN SPECIES	1586																MAPK8IP1 (ENSSARG00000008512) #22	ENSSARG00000008579 #23
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00930000151992	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00910000148141	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00930000151992	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Suina	ANCESTRAL SPECIES	34	ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Chacoan peccary	MODERN SPECIES	919	HSD17B12 (ENSCWAG00000021466)	ALKBH3 (ENSCWAG00000021459)	C11orf96 (ENSCWAG00000021454)	ACCSL (ENSCWAG00000021443) #8	ACCS (ENSCWAG00000021431)	EXT2 (ENSCWAG00000021417) #9	ALX4 (ENSCWAG00000021413) #10	CD82 (ENSCWAG00000021401) #12	TSPAN18 (ENSCWAG00000021388) #13	TP53I11 (ENSCWAG00000021382) #14	PRDM11 (ENSCWAG00000021374) #16	SYT13 (ENSCWAG00000021365) #17	CHST1 (ENSCWAG00000021361) #18	SLC35C1 (ENSCWAG00000021357) #20	CRY2 (ENSCWAG00000021334) #21	MAPK8IP1 (ENSCWAG00000021296) #22	FREY1 (ENSCWAG00000021286)	PEX16 (ENSCWAG00000021270) #23	LARGE2 (ENSCWAG00000021255) #24	PHF21A (ENSCWAG00000021231) #25	CREB3L1 (ENSCWAG00000021208) #27	DGKZ (ENSCWAG00000020966) #28	MDK (ENSCWAG00000020882) #29	CHRM4 (ENSCWAG00000020869) #30	AMBRA1 (ENSCWAG00000020799) #31	HARBI1 (ENSCWAG00000020778) #32	ATG13 (ENSCWAG00000020671) #33	ARHGAP1 (ENSCWAG00000020638) #34	ZNF408 (ENSCWAG00000020629) #35	F2 (ENSCWAG00000020586) #36	CKAP5 (ENSCWAG00000020545) #37
Pig	MODERN SPECIES	10	HSD17B12 (ENSSSCG00000021739)	ALKBH3 (ENSSSCG00000040937)	ACCSL (ENSSSCG00000057793) #8	ACCS (ENSSSCG00000013282)	ENSSSCG00000013281 #9	ENSSSCG00000061941 #9	ALX4 (ENSSSCG00000040329) #10	CD82 (ENSSSCG00000029521) #12	TSPAN18 (ENSSSCG00000013278) #13	TP53I11 (ENSSSCG00000031819) #14	PRDM11 (ENSSSCG00000013276) #16	SYT13 (ENSSSCG00000031590) #17	CHST1 (ENSSSCG00000013273) #18	SLC35C1 (ENSSSCG00000025647) #20	CRY2 (ENSSSCG00000013270) #21	MAPK8IP1 (ENSSSCG00000013269) #22	FREY1 (ENSSSCG00000056689)	PEX16 (ENSSSCG00000013267) #23	LARGE2 (ENSSSCG00000013266) #24	ENSSSCG00000049982	PHF21A (ENSSSCG00000023974) #25	CREB3L1 (ENSSSCG00000013263) #27	DGKZ (ENSSSCG00000013259) #28	MDK (ENSSSCG00000013260) #29	CHRM4 (ENSSSCG00000013261) #30	AMBRA1 (ENSSSCG00000013262) #31	HARBI1 (ENSSSCG00000013258) #32	ATG13 (ENSSSCG00000013257) #33	ARHGAP1 (ENSSSCG00000013256) #34	ZNF408 (ENSSSCG00000023097) #35	F2 (ENSSSCG00000013252) #36
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00930000151992	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT00390000016821	ENSGT00910000148817	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00930000151992	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Cetacea	ANCESTRAL SPECIES	4	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00930000151992	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Odontoceti	ANCESTRAL SPECIES	4	ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT00940000157226	ENSGT00390000016821	ENSGT00910000148817	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Dolphin	MODERN SPECIES	2774														SLC35C1 (ENSTTRG00000001039) #20	CRY2 (ENSTTRG00000001040) #21	MAPK8IP1 (ENSTTRG00000001041) #22	PEX16 (ENSTTRG00000001043) #23	LARGE2 (ENSTTRG00000001044) #24	PHF21A (ENSTTRG00000001045) #25
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT00940000157226	ENSGT00390000016821	ENSGT00910000148817	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Monodontidae	ANCESTRAL SPECIES	2	ENSGT00390000006196	ENSGT00940000154860	ENSGT00940000157226	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Beluga whale	MODERN SPECIES	7	TTC17 (ENSDLEG00000019853)	HSD17B12 (ENSDLEG00000019838)	ALKBH3 (ENSDLEG00000019830)	ENSDLEG00000019821 #8	ACCS (ENSDLEG00000019811)	EXT2 (ENSDLEG00000019803) #9	ALX4 (ENSDLEG00000019799) #10	CD82 (ENSDLEG00000019794) #12	TSPAN18 (ENSDLEG00000019787) #13	TP53I11 (ENSDLEG00000019784) #14	PRDM11 (ENSDLEG00000019779) #16	SYT13 (ENSDLEG00000019775) #17	CHST1 (ENSDLEG00000019771) #18	SLC35C1 (ENSDLEG00000019768) #20	CRY2 (ENSDLEG00000019743) #21	MAPK8IP1 (ENSDLEG00000019735) #22	PEX16 (ENSDLEG00000019675) #23	LARGE2 (ENSDLEG00000019658) #24	ENSDLEG00000019655	PHF21A (ENSDLEG00000019624) #25	CREB3L1 (ENSDLEG00000019610) #27	DGKZ (ENSDLEG00000019589) #28	MDK (ENSDLEG00000019582) #29	CHRM4 (ENSDLEG00000019579) #30	AMBRA1 (ENSDLEG00000019560) #31	HARBI1 (ENSDLEG00000019555) #32	ATG13 (ENSDLEG00000019150) #33	ARHGAP1 (ENSDLEG00000018942) #34	ZNF408 (ENSDLEG00000018910) #35	F2 (ENSDLEG00000018821) #36	CKAP5 (ENSDLEG00000018239) #37
Narwhal	MODERN SPECIES	314	API5 (ENSMMNG00015015999)	TTC17 (ENSMMNG00015016233)	HSD17B12 (ENSMMNG00015016514)	ACCSL (ENSMMNG00015016665) #8	ACCS (ENSMMNG00015016880)	EXT2 (ENSMMNG00015017366) #9	ALX4 (ENSMMNG00015017478) #10	CD82 (ENSMMNG00015017522) #12	TSPAN18 (ENSMMNG00015017592) #13	TP53I11 (ENSMMNG00015017641) #14	PRDM11 (ENSMMNG00015017700) #16	SYT13 (ENSMMNG00015017742) #17	CHST1 (ENSMMNG00015017784) #18	SLC35C1 (ENSMMNG00015017798) #20	CRY2 (ENSMMNG00015017838) #21	MAPK8IP1 (ENSMMNG00015017984) #22	FREY1 (ENSMMNG00015018127)	PEX16 (ENSMMNG00015018197) #23	LARGE2 (ENSMMNG00015018329) #24	PHF21A (ENSMMNG00015018555) #25	CREB3L1 (ENSMMNG00015018682) #27	DGKZ (ENSMMNG00015018868) #28	MDK (ENSMMNG00015019173) #29	CHRM4 (ENSMMNG00015019208) #30	AMBRA1 (ENSMMNG00015019294) #31	HARBI1 (ENSMMNG00015019436) #32	ATG13 (ENSMMNG00015019491) #33	ARHGAP1 (ENSMMNG00015019583) #34	ZNF408 (ENSMMNG00015019610) #35	F2 (ENSMMNG00015019642) #36	CKAP5 (ENSMMNG00015019798) #37
Vaquita	MODERN SPECIES	19	TTC17 (ENSPSNG00000020829)	HSD17B12 (ENSPSNG00000020946)	ALKBH3 (ENSPSNG00000020981)	C11orf96 (ENSPSNG00000021018)	ENSPSNG00000021026	ACCS (ENSPSNG00000021036)	EXT2 (ENSPSNG00000021099) #9	ALX4 (ENSPSNG00000021198) #10	CD82 (ENSPSNG00000021231) #12	TP53I11 (ENSPSNG00000004006) #14	PRDM11 (ENSPSNG00000004037) #16	SYT13 (ENSPSNG00000004053) #17	CHST1 (ENSPSNG00000004065) #18	SLC35C1 (ENSPSNG00000004076) #20	CRY2 (ENSPSNG00000004100) #21	MAPK8IP1 (ENSPSNG00000004148) #22	FREY1 (ENSPSNG00000004225)	PEX16 (ENSPSNG00000004261) #23	LARGE2 (ENSPSNG00000004402) #24	PHF21A (ENSPSNG00000004656) #25	CREB3L1 (ENSPSNG00000004707) #27	DGKZ (ENSPSNG00000004933) #28	MDK (ENSPSNG00000005164) #29	CHRM4 (ENSPSNG00000005202) #30	AMBRA1 (ENSPSNG00000005291) #31	HARBI1 (ENSPSNG00000005453) #32	ATG13 (ENSPSNG00000005490) #33	ARHGAP1 (ENSPSNG00000005549) #34	ZNF408 (ENSPSNG00000005582) #35	F2 (ENSPSNG00000005610) #36	CKAP5 (ENSPSNG00000005667) #37
Sperm whale	MODERN SPECIES	7	API5 (ENSPCTG00005014154)	TTC17 (ENSPCTG00005014617)	HSD17B12 (ENSPCTG00005014877)	ALKBH3 (ENSPCTG00005014964)	C16H11orf96 (ENSPCTG00005015005)	ACCSL (ENSPCTG00005015019) #8	EXT2 (ENSPCTG00005015291) #9	ALX4 (ENSPCTG00005015649) #10	TSPAN18 (ENSPCTG00005015731) #13	ENSPCTG00005015760 #12	PRDM11 (ENSPCTG00005015782) #16	SYT13 (ENSPCTG00005015941) #17	CHST1 (ENSPCTG00005016008) #18	SLC35C1 (ENSPCTG00005016021) #20	CRY2 (ENSPCTG00005016092) #21	MAPK8IP1 (ENSPCTG00005016404) #22	C16H11orf94 (ENSPCTG00005016710)	PEX16 (ENSPCTG00005016747) #23	LARGE2 (ENSPCTG00005016908) #24	PHF21A (ENSPCTG00005017366) #25	AMBRA1 (ENSPCTG00005017524) #31	ENSPCTG00005018324 #33	CKAP5 (ENSPCTG00005019025) #37	LRP4 (ENSPCTG00005019305)	ENSPCTG00005019663	NR1H3 (ENSPCTG00005019704)	ENSPCTG00005019900	CELF1 (ENSPCTG00005020176)	NDUFS3 (ENSPCTG00005020272)	FAM180B (ENSPCTG00005020314)	ENSPCTG00005020333
Blue whale	MODERN SPECIES	19	ALKBH3 (ENSBMSG00010013420)	C11orf96 (ENSBMSG00010013431)	ENSBMSG00010013443	ACCS (ENSBMSG00010013522)	EXT2 (ENSBMSG00010013657) #9	ALX4 (ENSBMSG00010013696) #10	CD82 (ENSBMSG00010013718) #12	TSPAN18 (ENSBMSG00010013734) #13	TP53I11 (ENSBMSG00010013752) #14	PRDM11 (ENSBMSG00010013777) #16	ENSBMSG00010013795	SYT13 (ENSBMSG00010013804) #17	CHST1 (ENSBMSG00010013813) #18	SLC35C1 (ENSBMSG00010013820) #20	CRY2 (ENSBMSG00010013886) #21	MAPK8IP1 (ENSBMSG00010014091) #22	FREY1 (ENSBMSG00010014231)	PEX16 (ENSBMSG00010014252) #23	LARGE2 (ENSBMSG00010014314) #24	PHF21A (ENSBMSG00010014561) #25	CREB3L1 (ENSBMSG00010014728) #27	DGKZ (ENSBMSG00010014872) #28	MDK (ENSBMSG00010015583) #29	CHRM4 (ENSBMSG00010015622) #30	AMBRA1 (ENSBMSG00010015727) #31	HARBI1 (ENSBMSG00010017065) #32	ATG13 (ENSBMSG00010017110) #33	ARHGAP1 (ENSBMSG00010017220) #34	ENSBMSG00010017280	ZNF408 (ENSBMSG00010017299) #35	F2 (ENSBMSG00010017325) #36
Pecora	ANCESTRAL SPECIES	7	ENSGT00390000016821	ENSGT00910000148817	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00930000151992	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Yarkand deer	MODERN SPECIES		ALKBH3 (ENSCHYG00000000269)	C11orf96 (ENSCHYG00000000279)	ACCSL (ENSCHYG00000000316) #8	ACCS (ENSCHYG00000000358)	EXT2 (ENSCHYG00000000443) #9	ALX4 (ENSCHYG00000000519) #10	CD82 (ENSCHYG00000000545) #12	TSPAN18 (ENSCHYG00000000585) #13	ENSCHYG00000000622 #14	ENSCHYG00000000654	PRDM11 (ENSCHYG00000000644) #16	SYT13 (ENSCHYG00000000666) #17	CHST1 (ENSCHYG00000000673) #18	SLC35C1 (ENSCHYG00000000680) #20	CRY2 (ENSCHYG00000000698) #21	MAPK8IP1 (ENSCHYG00000000750) #22	FREY1 (ENSCHYG00000000819)	PEX16 (ENSCHYG00000000848) #23	LARGE2 (ENSCHYG00000000920) #24	PHF21A (ENSCHYG00000000954) #25	CREB3L1 (ENSCHYG00000001030) #27	DGKZ (ENSCHYG00000001154) #28	MDK (ENSCHYG00000001474) #29	CHRM4 (ENSCHYG00000001502) #30	AMBRA1 (ENSCHYG00000001540) #31	HARBI1 (ENSCHYG00000001684) #32	ATG13 (ENSCHYG00000001705) #33	ARHGAP1 (ENSCHYG00000001791) #34	ZNF408 (ENSCHYG00000001850) #35	F2 (ENSCHYG00000001885) #36	CKAP5 (ENSCHYG00000001967) #37
Percora_a	ANCESTRAL SPECIES	6	ENSGT00940000157226	ENSGT00390000016821	ENSGT00910000148817	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Bovidae	ANCESTRAL SPECIES	6	ENSGT00940000157226	ENSGT00390000016821	ENSGT00910000148817	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Caprinae	ANCESTRAL SPECIES	6	ENSGT00940000157226	ENSGT00390000016821	ENSGT00910000148817	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Goat	MODERN SPECIES	6	HSD17B12 (ENSCHIG00000011795)	ALKBH3 (ENSCHIG00000017579)	ENSCHIG00000016194	ACCSL (ENSCHIG00000010057) #8	ACCS (ENSCHIG00000026253)	EXT2 (ENSCHIG00000026007) #9	ALX4 (ENSCHIG00000010305) #10	CD82 (ENSCHIG00000015537) #12	TSPAN18 (ENSCHIG00000024681) #13	TP53I11 (ENSCHIG00000017884) #14	PRDM11 (ENSCHIG00000003161) #16	SYT13 (ENSCHIG00000027048) #17	CHST1 (ENSCHIG00000008696) #18	SLC35C1 (ENSCHIG00000021201) #20	CRY2 (ENSCHIG00000023621) #21	MAPK8IP1 (ENSCHIG00000015720) #22	PEX16 (ENSCHIG00000011489) #23	LARGE2 (ENSCHIG00000021453) #24	PHF21A (ENSCHIG00000023760) #25	CREB3L1 (ENSCHIG00000008753) #27	DGKZ (ENSCHIG00000018020) #28	MDK (ENSCHIG00000020969) #29	CHRM4 (ENSCHIG00000006372) #30	AMBRA1 (ENSCHIG00000016854) #31	HARBI1 (ENSCHIG00000014327) #32	ATG13 (ENSCHIG00000014614) #33	ARHGAP1 (ENSCHIG00000022137) #34	ZNF408 (ENSCHIG00000025346) #35	F2 (ENSCHIG00000024270) #36	ENSCHIG00000009743	CKAP5 (ENSCHIG00000018334) #37
Rambouillet Sheep	MODERN SPECIES	6	ENSOARG00020019476	ALKBH3 (ENSOARG00020019554)	C11orf96 (ENSOARG00020019596)	ENSOARG00020019621	ENSOARG00020019654 #8	ACCS (ENSOARG00020019774)	EXT2 (ENSOARG00020019927) #9	ALX4 (ENSOARG00020020142) #10	CD82 (ENSOARG00020020176) #12	TSPAN18 (ENSOARG00020020280) #13	TP53I11 (ENSOARG00020020367) #14	PRDM11 (ENSOARG00020020437) #16	SYT13 (ENSOARG00020020545) #17	SLC35C1 (ENSOARG00020020655) #20	CRY2 (ENSOARG00020020700) #21	MAPK8IP1 (ENSOARG00020021179) #22	FREY1 (ENSOARG00020021284)	PEX16 (ENSOARG00020021321) #23	LARGE2 (ENSOARG00020021424) #24	PHF21A (ENSOARG00020021567) #25	CREB3L1 (ENSOARG00020021730) #27	DGKZ (ENSOARG00020021820) #28	MDK (ENSOARG00020022725) #29	CHRM4 (ENSOARG00020022796) #30	AMBRA1 (ENSOARG00020022829) #31	HARBI1 (ENSOARG00020023065) #32	ATG13 (ENSOARG00020023093) #33	ARHGAP1 (ENSOARG00020023238) #34	ZNF408 (ENSOARG00020023273) #35	F2 (ENSOARG00020023298) #36	CKAP5 (ENSOARG00020023388) #37
Bovinae	ANCESTRAL SPECIES	26	ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b.d.a #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
American bison	MODERN SPECIES	3100											TP53I11 (ENSBBBG00000014364) #14	PRDM11 (ENSBBBG00000014336) #16	SYT13 (ENSBBBG00000014325) #17	SLC35C1 (ENSBBBG00000014315) #20	CRY2 (ENSBBBG00000003251) #21	MAPK8IP1 (ENSBBBG00000003238) #22	FREY1 (ENSBBBG00000001443)	PEX16 (ENSBBBG00000003214) #23	LARGE2 (ENSBBBG00000014161) #24	PHF21A (ENSBBBG00000003187) #25	CREB3L1 (ENSBBBG00000003171) #27	ENSBBBG00000003163 #28	ENSBBBG00000014102 #29	CHRM4 (ENSBBBG00000014075) #30	AMBRA1 (ENSBBBG00000014063) #31	HARBI1 (ENSBBBG00000013882) #32	ATG13 (ENSBBBG00000002985) #33	ARHGAP1 (ENSBBBG00000013736) #34	ZNF408 (ENSBBBG00000013728) #35	F2 (ENSBBBG00000002915) #36	CKAP5 (ENSBBBG00000002889) #37
Bos	ANCESTRAL SPECIES	25	ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b.d.a #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Bos_b	ANCESTRAL SPECIES	12	ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b.d.a #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Cow	MODERN SPECIES	6	C15H11orf96 (ENSBTAG00000045822)	ACCSL (ENSBTAG00000012053) #8	ACCS (ENSBTAG00000008465)	EXT2 (ENSBTAG00000019644) #9	ALX4 (ENSBTAG00000027563) #10	CD82 (ENSBTAG00000031252) #12	TSPAN18 (ENSBTAG00000021484) #13	ENSBTAG00000053859	TP53I11 (ENSBTAG00000017228) #14	PRDM11 (ENSBTAG00000006443) #16	SYT13 (ENSBTAG00000001703) #17	ENSBTAG00000054083	CHST1 (ENSBTAG00000003721) #18	SLC35C1 (ENSBTAG00000003199) #20	CRY2 (ENSBTAG00000021223) #21	MAPK8IP1 (ENSBTAG00000000317) #22	FREY1 (ENSBTAG00000027562)	PEX16 (ENSBTAG00000003126) #23	LARGE2 (ENSBTAG00000009607) #24	PHF21A (ENSBTAG00000009611) #25	CREB3L1 (ENSBTAG00000006143) #27	DGKZ (ENSBTAG00000013636) #28	MDK (ENSBTAG00000007740) #29	CHRM4 (ENSBTAG00000033699) #30	AMBRA1 (ENSBTAG00000004282) #31	HARBI1 (ENSBTAG00000004639) #32	ATG13 (ENSBTAG00000017325) #33	ARHGAP1 (ENSBTAG00000016501) #34	ZNF408 (ENSBTAG00000027557) #35	F2 (ENSBTAG00000007148) #36	CKAP5 (ENSBTAG00000004448) #37
Hybrid Bos Indicus	MODERN SPECIES	6	C11orf96 (ENSBIXG00005002746)	ACCSL (ENSBIXG00005016927) #8	ACCS (ENSBIXG00005002769)	EXT2 (ENSBIXG00005017227) #9	ALX4 (ENSBIXG00005017263) #10	CD82 (ENSBIXG00005017303) #12	ENSBIXG00005017320	TSPAN18 (ENSBIXG00005017360) #13	TP53I11 (ENSBIXG00005006359) #14	PRDM11 (ENSBIXG00005002842) #16	SYT13 (ENSBIXG00005017503) #17	ENSBIXG00005017575	CHST1 (ENSBIXG00005017606) #18	SLC35C1 (ENSBIXG00005002867) #20	CRY2 (ENSBIXG00005017785) #21	MAPK8IP1 (ENSBIXG00005017891) #22	FREY1 (ENSBIXG00005017911)	PEX16 (ENSBIXG00005005656) #23	LARGE2 (ENSBIXG00005018050) #24	PHF21A (ENSBIXG00005018097) #25	CREB3L1 (ENSBIXG00005002939) #27	DGKZ (ENSBIXG00005018295) #28	ENSBIXG00005018454 #29	CHRM4 (ENSBIXG00005018467) #30	AMBRA1 (ENSBIXG00005007656) #31	HARBI1 (ENSBIXG00005018637) #32	ATG13 (ENSBIXG00005003045) #33	ARHGAP1 (ENSBIXG00005003058) #34	ZNF408 (ENSBIXG00005018816) #35	F2 (ENSBIXG00005018882) #36	CKAP5 (ENSBIXG00005018988) #37
Bos_a	ANCESTRAL SPECIES	36	ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b.d.a #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000155097.e.a	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36
Domestic yak	MODERN SPECIES	4	HSD17B12 (ENSBGRG00000024610)	ALKBH3 (ENSBGRG00000024727)	ENSBGRG00000024758	ENSBGRG00000024769 #8	ACCS (ENSBGRG00000024813)	EXT2 (ENSBGRG00000024837) #9	ALX4 (ENSBGRG00000024852) #10	CD82 (ENSBGRG00000024889) #12	TSPAN18 (ENSBGRG00000024939) #13	ENSBGRG00000024991 #14	PRDM11 (ENSBGRG00000008834) #16	SYT13 (ENSBGRG00000009098) #17	CHST1 (ENSBGRG00000009183) #18	SLC35C1 (ENSBGRG00000009196) #20	CRY2 (ENSBGRG00000009273) #21	MAPK8IP1 (ENSBGRG00000009722) #22	FREY1 (ENSBGRG00000009996)	PEX16 (ENSBGRG00000010057) #23	LARGE2 (ENSBGRG00000010390) #24	PHF21A (ENSBGRG00000010552) #25	CREB3L1 (ENSBGRG00000010789) #27	DGKZ (ENSBGRG00000011064) #28	ENSBGRG00000012888 #29	CHRM4 (ENSBGRG00000012936) #30	AMBRA1 (ENSBGRG00000012979) #31	TAF9 (ENSBGRG00000013181)	HARBI1 (ENSBGRG00000013222) #32	ATG13 (ENSBGRG00000013263) #33	ARHGAP1 (ENSBGRG00000013511) #34	ZNF408 (ENSBGRG00000013630) #35	F2 (ENSBGRG00000013793) #36
Wild yak	MODERN SPECIES	2113													CHST1 (ENSBMUG00000013748) #18	SLC35C1 (ENSBMUG00000013779) #20	CRY2 (ENSBMUG00000013827) #21	MAPK8IP1 (ENSBMUG00000013925) #22	FREY1 (ENSBMUG00000013987)	PEX16 (ENSBMUG00000014004) #23	LARGE2 (ENSBMUG00000014075) #24	PHF21A (ENSBMUG00000014198) #25
Siberian musk deer	MODERN SPECIES	118	TTC17 (ENSMMSG00000011534)	HSD17B12 (ENSMMSG00000011385)	ALKBH3 (ENSMMSG00000011296)	ACCSL (ENSMMSG00000011043) #8	ACCS (ENSMMSG00000010941)	EXT2 (ENSMMSG00000010833) #9	ALX4 (ENSMMSG00000010786) #10	CD82 (ENSMMSG00000010721) #12	TSPAN18 (ENSMMSG00000010679) #13	TP53I11 (ENSMMSG00000010631) #14	PRDM11 (ENSMMSG00000010568) #16	SYT13 (ENSMMSG00000010526) #17	CHST1 (ENSMMSG00000010503) #18	SLC35C1 (ENSMMSG00000010467) #20	CRY2 (ENSMMSG00000010187) #21	MAPK8IP1 (ENSMMSG00000010074) #22	FREY1 (ENSMMSG00000010042)	PEX16 (ENSMMSG00000009980) #23	LARGE2 (ENSMMSG00000009888) #24	PHF21A (ENSMMSG00000009796) #25	CREB3L1 (ENSMMSG00000009753) #27	DGKZ (ENSMMSG00000008653) #28	MDK (ENSMMSG00000008497) #29	CHRM4 (ENSMMSG00000008482) #30	AMBRA1 (ENSMMSG00000008353) #31	HARBI1 (ENSMMSG00000008321) #32	ATG13 (ENSMMSG00000008155) #33	ARHGAP1 (ENSMMSG00000008062) #34	ZNF408 (ENSMMSG00000008033) #35	F2 (ENSMMSG00000008000) #36	CKAP5 (ENSMMSG00000007823) #37
Camelidae	ANCESTRAL SPECIES	25	ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Arabian camel	MODERN SPECIES	1	HSD17B12 (ENSCDRG00005013288)	ALKBH3 (ENSCDRG00005013227)	C11orf96 (ENSCDRG00005013211)	ACCSL (ENSCDRG00005013037) #8	ACCS (ENSCDRG00005012856)	EXT2 (ENSCDRG00005012724) #9	ALX4 (ENSCDRG00005012645) #10	CD82 (ENSCDRG00005012531) #12	TSPAN18 (ENSCDRG00005012470) #13	TP53I11 (ENSCDRG00005012371) #14	PRDM11 (ENSCDRG00005012242) #16	SYT13 (ENSCDRG00005012181) #17	CHST1 (ENSCDRG00005012167) #18	SLC35C1 (ENSCDRG00005012129) #20	CRY2 (ENSCDRG00005011968) #21	MAPK8IP1 (ENSCDRG00005011734) #22	FREY1 (ENSCDRG00005011672)	PEX16 (ENSCDRG00005011593) #23	LARGE2 (ENSCDRG00005011467) #24	PHF21A (ENSCDRG00005011242) #25	CREB3L1 (ENSCDRG00005011173) #27	DGKZ (ENSCDRG00005010475) #28	MDK (ENSCDRG00005010345) #29	CHRM4 (ENSCDRG00005010302) #30	AMBRA1 (ENSCDRG00005009861) #31	HARBI1 (ENSCDRG00005009768) #32	ATG13 (ENSCDRG00005009422) #33	ARHGAP1 (ENSCDRG00005009320) #34	ZNF408 (ENSCDRG00005009244) #35	F2 (ENSCDRG00005009091) #36	CKAP5 (ENSCDRG00005008832) #37
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00910000148141	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36
Laurasiatheria_c	ANCESTRAL SPECIES	9	ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Equus	ANCESTRAL SPECIES	56	ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Donkey	MODERN SPECIES	8	HSD17B12 (ENSEASG00005014853)	ALKBH3 (ENSEASG00005014856)	C11orf96 (ENSEASG00005014860)	ACCSL (ENSEASG00005014863) #8	ACCS (ENSEASG00005014868)	EXT2 (ENSEASG00005014877) #9	ALX4 (ENSEASG00005014886) #10	CD82 (ENSEASG00005014890) #12	TSPAN18 (ENSEASG00005026170) #13	ENSEASG00005024242 #14	PRDM11 (ENSEASG00005014907) #16	SYT13 (ENSEASG00005014911) #17	CHST1 (ENSEASG00005014919) #18	SLC35C1 (ENSEASG00005014922) #20	CRY2 (ENSEASG00005014923) #21	MAPK8IP1 (ENSEASG00005014927) #22	FREY1 (ENSEASG00005030976)	PEX16 (ENSEASG00005014929) #23	LARGE2 (ENSEASG00005014935) #24	PHF21A (ENSEASG00005014943) #25	CREB3L1 (ENSEASG00005014953) #27	DGKZ (ENSEASG00005014964) #28	MDK (ENSEASG00005029065) #29	CHRM4 (ENSEASG00005029426) #30	AMBRA1 (ENSEASG00005015004) #31	HARBI1 (ENSEASG00005015208) #32	ATG13 (ENSEASG00005015246) #33	ARHGAP1 (ENSEASG00005015450) #34	ZNF408 (ENSEASG00005015461) #35	F2 (ENSEASG00005015463) #36	CKAP5 (ENSEASG00005015601) #37
Horse	MODERN SPECIES	3	API5 (ENSECAG00000047216)	TTC17 (ENSECAG00000000753)	ENSECAG00000057228	HSD17B12 (ENSECAG00000010538)	ALKBH3 (ENSECAG00000010673)	ACCSL (ENSECAG00000011908) #8	ACCS (ENSECAG00000013484)	EXT2 (ENSECAG00000015881) #9	ALX4 (ENSECAG00000019892) #10	CD82 (ENSECAG00000020051) #12	TP53I11 (ENSECAG00000023101) #14	PRDM11 (ENSECAG00000023612) #16	SYT13 (ENSECAG00000023889) #17	CHST1 (ENSECAG00000024106) #18	SLC35C1 (ENSECAG00000000770) #21	MAPK8IP1 (ENSECAG00000007619) #22	PEX16 (ENSECAG00000011531) #23	LARGE2 (ENSECAG00000014596) #24	PHF21A (ENSECAG00000017082) #25	CREB3L1 (ENSECAG00000018306) #27	DGKZ (ENSECAG00000018796) #28	ENSECAG00000029071 #29	CHRM4 (ENSECAG00000023751) #30	AMBRA1 (ENSECAG00000023789) #31	HARBI1 (ENSECAG00000024452) #32	ATG13 (ENSECAG00000024606) #33	ARHGAP1 (ENSECAG00000009844) #34	ZNF408 (ENSECAG00000010878) #35	F2 (ENSECAG00000011321) #36	CKAP5 (ENSECAG00000015563) #37	LRP4 (ENSECAG00000023663)
Chiroptera	ANCESTRAL SPECIES	5	ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Megabat	MODERN SPECIES	3270														SLC35C1 (ENSPVAG00000003526) #20	CRY2 (ENSPVAG00000003527) #21	MAPK8IP1 (ENSPVAG00000003529) #22	PEX16 (ENSPVAG00000003531) #23	LARGE2 (ENSPVAG00000003532) #24	PHF21A (ENSPVAG00000003534) #25
Microchiroptera	ANCESTRAL SPECIES	31	ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Microbat	MODERN SPECIES	1034													CHST1 (ENSMLUG00000002287) #18	SLC35C1 (ENSMLUG00000014731) #20	CRY2 (ENSMLUG00000014733) #21	MAPK8IP1 (ENSMLUG00000014740) #22	FREY1 (ENSMLUG00000027006)	PEX16 (ENSMLUG00000014751) #23	LARGE2 (ENSMLUG00000014764) #24	PHF21A (ENSMLUG00000014773) #25	CREB3L1 (ENSMLUG00000009820) #27	DGKZ (ENSMLUG00000009836) #28	MDK (ENSMLUG00000022787) #29	CHRM4 (ENSMLUG00000025622) #30	AMBRA1 (ENSMLUG00000009880) #31	HARBI1 (ENSMLUG00000011485) #32	ATG13 (ENSMLUG00000017626) #33	ARHGAP1 (ENSMLUG00000017628) #34	ZNF408 (ENSMLUG00000017629) #35	F2 (ENSMLUG00000017631) #36	CKAP5 (ENSMLUG00000017633) #37
Greater horseshoe bat	MODERN SPECIES	2	HSD17B12 (ENSRFEG00010004074)	ALKBH3 (ENSRFEG00010004046)	C11orf96 (ENSRFEG00010004030)	ACCSL (ENSRFEG00010004009) #8	ACCS (ENSRFEG00010003969)	EXT2 (ENSRFEG00010003919) #9	ALX4 (ENSRFEG00010003877) #10	CD82 (ENSRFEG00010003839) #12	TSPAN18 (ENSRFEG00010003813) #13	TP53I11 (ENSRFEG00010003790) #14	PRDM11 (ENSRFEG00010003762) #16	SYT13 (ENSRFEG00010003732) #17	CHST1 (ENSRFEG00010003717) #18	SLC35C1 (ENSRFEG00010003706) #20	CRY2 (ENSRFEG00010003641) #21	MAPK8IP1 (ENSRFEG00010003534) #22	FREY1 (ENSRFEG00010003489)	PEX16 (ENSRFEG00010003462) #23	LARGE2 (ENSRFEG00010003418) #24	PHF21A (ENSRFEG00010003386) #25	CREB3L1 (ENSRFEG00010003317) #27	DGKZ (ENSRFEG00010002446) #28	MDK (ENSRFEG00010001996) #29	CHRM4 (ENSRFEG00010001975) #30	AMBRA1 (ENSRFEG00010001788) #31	HARBI1 (ENSRFEG00010001682) #32	ATG13 (ENSRFEG00010001557) #33	ARHGAP1 (ENSRFEG00010001486) #34	ZNF408 (ENSRFEG00010001453) #35	F2 (ENSRFEG00010001400) #36	CKAP5 (ENSRFEG00010001142) #37
Carnivora	ANCESTRAL SPECIES	7	ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00910000148141	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36
Caniformia	ANCESTRAL SPECIES	25	ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00910000148141	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36
Caniformia_b	ANCESTRAL SPECIES	3	ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00910000148141	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36
Ursidae	ANCESTRAL SPECIES	2	ENSGT00940000157226	ENSGT00390000016821	ENSGT00910000148817	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00910000148141	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36
Ursus	ANCESTRAL SPECIES	85	ENSGT00390000016821	ENSGT00910000148817	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000169558	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00910000148141	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
American black bear	DUPLICATION
American black bear	MODERN SPECIES	8077																ENSUAMG00000013672 #22	PEX16 (ENSUAMG00000013673) #23	LARGE2 (ENSUAMG00000013676) #24	PHF21A (ENSUAMG00000013681) #25
American black bear	MODERN SPECIES	4917														SLC35C1 (ENSUAMG00000018780) #20	CRY2 (ENSUAMG00000018228) #21	ENSUAMG00000018079 #22
Giant Panda	MODERN SPECIES	7	TTC17 (ENSAMEG00000011414)	HSD17B12 (ENSAMEG00000004853)	ALKBH3 (ENSAMEG00000004842)	ACCSL (ENSAMEG00000004827) #8	EXT2 (ENSAMEG00000004795) #9	ALX4 (ENSAMEG00000027276) #10	CD82 (ENSAMEG00000009274) #12	TSPAN18 (ENSAMEG00000000765) #13	TP53I11 (ENSAMEG00000000751) #14	ENSAMEG00000024608 #14	PRDM11 (ENSAMEG00000000745) #16	SYT13 (ENSAMEG00000024139) #17	CHST1 (ENSAMEG00000018807) #18	SLC35C1 (ENSAMEG00000026256) #20	CRY2 (ENSAMEG00000000688) #21	MAPK8IP1 (ENSAMEG00000000657) #22	FREY1 (ENSAMEG00000000654)	PEX16 (ENSAMEG00000000638) #23	LARGE2 (ENSAMEG00000000610) #24	PHF21A (ENSAMEG00000000598) #25	CREB3L1 (ENSAMEG00000006633) #27	DGKZ (ENSAMEG00000006657) #28	MDK (ENSAMEG00000006752) #29	CHRM4 (ENSAMEG00000020060) #30	AMBRA1 (ENSAMEG00000006762) #31	ENSAMEG00000023608	HARBI1 (ENSAMEG00000006795) #32	ATG13 (ENSAMEG00000006798) #33	ARHGAP1 (ENSAMEG00000006844) #34	ZNF408 (ENSAMEG00000006904) #35	F2 (ENSAMEG00000006910) #36
Mustelinae	ANCESTRAL SPECIES	74	ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
American mink	MODERN SPECIES	45	C11orf96 (ENSNVIG00000013521)	ACCSL (ENSNVIG00000013497) #8	ACCS (ENSNVIG00000013477)	EXT2 (ENSNVIG00000013441) #9	ALX4 (ENSNVIG00000013421) #10	ENSNVIG00000013407	CD82 (ENSNVIG00000013361) #12	ENSNVIG00000013354	TSPAN18 (ENSNVIG00000013342) #13	P5I11 (ENSNVIG00000013330) #14	PRDM11 (ENSNVIG00000013288) #16	SYT13 (ENSNVIG00000013272) #17	CHST1 (ENSNVIG00000013259) #18	FUCT1 (ENSNVIG00000013223) #20	CRY2 (ENSNVIG00000013168) #21	MAPK8IP1 (ENSNVIG00000013121) #22	FREY1 (ENSNVIG00000013108)	PEX16 (ENSNVIG00000013046) #23	LARGE2 (ENSNVIG00000013006) #24	PHF21A (ENSNVIG00000012951) #25	CREB3L1 (ENSNVIG00000012921) #27	DGKZ (ENSNVIG00000012726) #28	ENSNVIG00000012699 #29	CHRM4 (ENSNVIG00000012697) #30	AMBRA1 (ENSNVIG00000012478) #31	HARB1 (ENSNVIG00000012442) #32	ATG13 (ENSNVIG00000012327) #33	ZNF408 (ENSNVIG00000012294) #35	F2 (ENSNVIG00000012216) #36	CKAP5 (ENSNVIG00000012011) #37	LRP4 (ENSNVIG00000011939)
Ferret	MODERN SPECIES	255	ACCSL (ENSMPUG00000006138) #8	ACCS (ENSMPUG00000006124)	EXT2 (ENSMPUG00000006112) #9	ALX4 (ENSMPUG00000006095) #10	CD82 (ENSMPUG00000006084) #12	TP53I11 (ENSMPUG00000006042) #14	TSPAN18 (ENSMPUG00000006031) #13	ENSMPUG00000006027	ENSMPUG00000006019 #16	ENSMPUG00000006010	ENSMPUG00000005998 #17	ENSMPUG00000005991	CHST1 (ENSMPUG00000018441) #18	SLC35C1 (ENSMPUG00000005984) #20	CRY2 (ENSMPUG00000005785) #21	MAPK8IP1 (ENSMPUG00000005682) #22	PEX16 (ENSMPUG00000005672) #23	LARGE2 (ENSMPUG00000005660) #24	PHF21A (ENSMPUG00000005646) #25	CREB3L1 (ENSMPUG00000005639) #27	DGKZ (ENSMPUG00000005616) #28	MDK (ENSMPUG00000005575) #29	CHRM4 (ENSMPUG00000018440) #30	AMBRA1 (ENSMPUG00000005552) #31	HARBI1 (ENSMPUG00000005540) #32	ATG13 (ENSMPUG00000005512) #33	ARHGAP1 (ENSMPUG00000005499) #34	ZNF408 (ENSMPUG00000005490) #35	F2 (ENSMPUG00000005310) #36	CKAP5 (ENSMPUG00000005279) #37	LRP4 (ENSMPUG00000005034)
Canidae	ANCESTRAL SPECIES	13	ENSGT00440000033504.A	ENSGT00940000160155	ENSGT00550000074828.a.h	ENSGT00940000161780	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b.e.a #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Canis_lupus	ANCESTRAL SPECIES	7	ENSGT00440000033504.A	ENSGT00940000160155	ENSGT00550000074828.a.h	ENSGT00940000161780	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b.e.a #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Dog	MODERN SPECIES	9	CD151 (ENSCAFG00845006743)	CRACR2B (ENSCAFG00845006671)	PNPLA2 (ENSCAFG00845006576)	ENSCAFG00845006496	ENSCAFG00845006388	EXT2 (ENSCAFG00845006136) #9	ALX4 (ENSCAFG00845006003) #10	CD82 (ENSCAFG00845005975) #12	TSPAN18 (ENSCAFG00845005948) #13	TP53I11 (ENSCAFG00845005919) #14	PRDM11 (ENSCAFG00845029718) #16	SYT13 (ENSCAFG00845029683) #17	CHST1 (ENSCAFG00845029662) #18	SLC35C1 (ENSCAFG00845029632) #20	CRY2 (ENSCAFG00845029583) #21	MAPK8IP1 (ENSCAFG00845029426) #22	C18H11orf94 (ENSCAFG00845029379)	PEX16 (ENSCAFG00845029302) #23	LARGE2 (ENSCAFG00845029215) #24	PHF21A (ENSCAFG00845029086) #25	CREB3L1 (ENSCAFG00845028997) #27	DGKZ (ENSCAFG00845028466) #28	ENSCAFG00845028187 #29	CHRM4 (ENSCAFG00845028143) #30	ENSCAFG00845028115	AMBRA1 (ENSCAFG00845027652) #31	HARBI1 (ENSCAFG00845027517) #32	ATG13 (ENSCAFG00845027292) #33	ARHGAP1 (ENSCAFG00845027069) #34	ZNF408 (ENSCAFG00845027019) #35	F2 (ENSCAFG00845026955) #36
Dingo	MODERN SPECIES	69	ENSCAFG00020017624	PNPLA2 (ENSCAFG00020017628)	ENSCAFG00020017684	PIDD1 (ENSCAFG00020017688)	ACCS (ENSCAFG00020017697)	EXT2 (ENSCAFG00020017760) #9	ALX4 (ENSCAFG00020017762) #10	CD82 (ENSCAFG00020017766) #12	TSPAN18 (ENSCAFG00020017771) #13	TP53I11 (ENSCAFG00020017772) #14	PRDM11 (ENSCAFG00020017777) #16	SYT13 (ENSCAFG00020017779) #17	CHST1 (ENSCAFG00020017785) #18	SLC35C1 (ENSCAFG00020017788) #20	CRY2 (ENSCAFG00020017805) #21	MAPK8IP1 (ENSCAFG00020018475) #22	PEX16 (ENSCAFG00020018482) #23	LARGE2 (ENSCAFG00020018489) #24	PHF21A (ENSCAFG00020018990) #25	CREB3L1 (ENSCAFG00020019008) #27	DGKZ (ENSCAFG00020019055) #28	ENSCAFG00020019107 #29	CHRM4 (ENSCAFG00020019111) #30	AMBRA1 (ENSCAFG00020019116) #31	HARBI1 (ENSCAFG00020019139) #32	ATG13 (ENSCAFG00020019142) #33	ARHGAP1 (ENSCAFG00020019150) #34	ZNF408 (ENSCAFG00020019155) #35	F2 (ENSCAFG00020019158) #36	CKAP5 (ENSCAFG00020019305) #37	LRP4 (ENSCAFG00020022152)
Red fox	MODERN SPECIES	49	CD151 (ENSVVUG00000000184)	CRACR2B (ENSVVUG00000000162)	PNPLA2 (ENSVVUG00000000122)	PIDD1 (ENSVVUG00000000083)	ACCS (ENSVVUG00000000057)	EXT2 (ENSVVUG00000027292) #9	ALX4 (ENSVVUG00000027285) #10	CD82 (ENSVVUG00000027274) #12	TSPAN18 (ENSVVUG00000027267) #13	TP53I11 (ENSVVUG00000027262) #14	PRDM11 (ENSVVUG00000027249) #16	SYT13 (ENSVVUG00000027243) #17	CHST1 (ENSVVUG00000027239) #18	SLC35C1 (ENSVVUG00000027235) #20	CRY2 (ENSVVUG00000027229) #21	MAPK8IP1 (ENSVVUG00000027198) #22	PEX16 (ENSVVUG00000027196) #23	LARGE2 (ENSVVUG00000027012) #24	PHF21A (ENSVVUG00000026999) #25	CREB3L1 (ENSVVUG00000026984) #27	DGKZ (ENSVVUG00000026981) #28	MDK (ENSVVUG00000026979) #29	CHRM4 (ENSVVUG00000026978) #30	AMBRA1 (ENSVVUG00000026969) #31	HARBI1 (ENSVVUG00000026967) #32	ATG13 (ENSVVUG00000026821) #33	ARHGAP1 (ENSVVUG00000026807) #34	ZNF408 (ENSVVUG00000026805) #35	F2 (ENSVVUG00000026767) #36	CKAP5 (ENSVVUG00000026762) #37	LRP4 (ENSVVUG00000026554)
Felidae	ANCESTRAL SPECIES		ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT01020000230401.a.a.a.i.b	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00500000045038.m.a.a	ENSGT00940000154234.b #36
Cat	MODERN SPECIES	241	API5 (ENSFCAG00000031994)	TTC17 (ENSFCAG00000023058)	HSD17B12 (ENSFCAG00000022122)	ACCSL (ENSFCAG00000005617) #8	EXT2 (ENSFCAG00000005619) #9	ALX4 (ENSFCAG00000005620) #10	ENSFCAG00000035141	CD82 (ENSFCAG00000012861) #12	TSPAN18 (ENSFCAG00000004186) #13	TP53I11 (ENSFCAG00000044947) #14	PRDM11 (ENSFCAG00000006658) #16	SYT13 (ENSFCAG00000030929) #17	CHST1 (ENSFCAG00000006661) #18	SLC35C1 (ENSFCAG00000026308) #20	CRY2 (ENSFCAG00000003188) #21	MAPK8IP1 (ENSFCAG00000003189) #22	FREY1 (ENSFCAG00000041581)	PEX16 (ENSFCAG00000003190) #23	LARGE2 (ENSFCAG00000021941) #24	PHF21A (ENSFCAG00000027311) #25	CREB3L1 (ENSFCAG00000018794) #27	DGKZ (ENSFCAG00000013634) #28	MDK (ENSFCAG00000023547) #29	CHRM4 (ENSFCAG00000024780) #30	AMBRA1 (ENSFCAG00000013635) #31	HARBI1 (ENSFCAG00000029910) #32	ATG13 (ENSFCAG00000013637) #33	ARHGAP1 (ENSFCAG00000013638) #34	ZNF408 (ENSFCAG00000029105) #35	ENSFCAG00000041074	F2 (ENSFCAG00000029088) #36
Panthera	ANCESTRAL SPECIES	13	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT01020000230401.a.a.a.i.b	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00500000045038.m.a.a	ENSGT00940000154234.b #36
Panthera_a	ANCESTRAL SPECIES	20	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT01020000230401.a.a.a.i.b	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00500000045038.m.a.a	ENSGT00940000154234.b #36
lion	MODERN SPECIES	10	ALKBH3 (ENSPLOG00000009033)	C11orf96 (ENSPLOG00000009053)	ACCSL (ENSPLOG00000009077) #8	ACCS (ENSPLOG00000009169)	EXT2 (ENSPLOG00000009265) #9	ALX4 (ENSPLOG00000009372) #10	CD82 (ENSPLOG00000009416) #12	TSPAN18 (ENSPLOG00000009462) #13	TP53I11 (ENSPLOG00000009507) #14	PRDM11 (ENSPLOG00000009558) #16	SYT13 (ENSPLOG00000009590) #17	CHST1 (ENSPLOG00000009626) #18	OTUB1 (ENSPLOG00000009639)	SLC35C1 (ENSPLOG00000009663) #20	CRY2 (ENSPLOG00000009691) #21	MAPK8IP1 (ENSPLOG00000009776) #22	FREY1 (ENSPLOG00000009880)	PEX16 (ENSPLOG00000009908) #23	PHF21A (ENSPLOG00000010070) #25	CREB3L1 (ENSPLOG00000004966) #27	DGKZ (ENSPLOG00000005116) #28	MDK (ENSPLOG00000005259) #29	CHRM4 (ENSPLOG00000005269) #30	AMBRA1 (ENSPLOG00000005299) #31	ENSPLOG00000005359	HARBI1 (ENSPLOG00000005373) #32	ATG13 (ENSPLOG00000005426) #33	ARHGAP1 (ENSPLOG00000005477) #34	ZNF408 (ENSPLOG00000005509) #35	ENSPLOG00000005532	F2 (ENSPLOG00000005576) #36
leopard	MODERN SPECIES	58	ACCSL (ENSPPRG00000005058) #8	ACCS (ENSPPRG00000004897)	EXT2 (ENSPPRG00000004504) #9	ALX4 (ENSPPRG00000001680) #10	ENSPPRG00000000608	CD82 (ENSPPRG00000000435) #12	TSPAN18 (ENSPPRG00000023207) #13	TP53I11 (ENSPPRG00000023362) #14	PRDM11 (ENSPPRG00000024084) #16	SYT13 (ENSPPRG00000017141) #17	CHST1 (ENSPPRG00000022251) #18	ENSPPRG00000016519	ENSPPRG00000016136	SLC35C1 (ENSPPRG00000015807) #20	CRY2 (ENSPPRG00000013303) #21	MAPK8IP1 (ENSPPRG00000011063) #22	FREY1 (ENSPPRG00000010618)	PEX16 (ENSPPRG00000010501) #23	LARGE2 (ENSPPRG00000010115) #24	PHF21A (ENSPPRG00000007738) #25	CREB3L1 (ENSPPRG00000006852) #27	DGKZ (ENSPPRG00000006446) #28	MDK (ENSPPRG00000001591) #29	CHRM4 (ENSPPRG00000021661) #30	AMBRA1 (ENSPPRG00000000398) #31	HARBI1 (ENSPPRG00000024315) #32	ATG13 (ENSPPRG00000024435) #33	ARHGAP1 (ENSPPRG00000017517) #34	ZNF408 (ENSPPRG00000016866) #35	ENSPPRG00000021564	F2 (ENSPPRG00000015996) #36
Tiger	MODERN SPECIES	168												CHST1 (ENSPTIG00000011120) #18	ENSPTIG00000009909	SLC35C1 (ENSPTIG00000011145) #20	CRY2 (ENSPTIG00000011440) #21	MAPK8IP1 (ENSPTIG00000011567) #22	FREY1 (ENSPTIG00000011773)	PEX16 (ENSPTIG00000011804) #23	LARGE2 (ENSPTIG00000012000) #24	PHF21A (ENSPTIG00000012098) #25	CREB3L1 (ENSPTIG00000012554) #27	DGKZ (ENSPTIG00000012708) #28	MDK (ENSPTIG00000012940) #29	CHRM4 (ENSPTIG00000009949) #30	AMBRA1 (ENSPTIG00000013363) #31	HARBI1 (ENSPTIG00000014054) #32	ATG13 (ENSPTIG00000014275) #33	ARHGAP1 (ENSPTIG00000014598) #34	ZNF408 (ENSPTIG00000015467) #35	F2 (ENSPTIG00000015545) #36	CKAP5 (ENSPTIG00000015717) #37
Atlantogenata	ANCESTRAL SPECIES	13	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00930000151992	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Xenarthra	ANCESTRAL SPECIES	19															ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Armadillo	MODERN SPECIES	1506															CRY2 (ENSDNOG00000039122) #21	MAPK8IP1 (ENSDNOG00000031412) #22	FREY1 (ENSDNOG00000034541)	PEX16 (ENSDNOG00000024927) #23	LARGE2 (ENSDNOG00000001204) #24	PHF21A (ENSDNOG00000001209) #25	CREB3L1 (ENSDNOG00000010500) #27	DGKZ (ENSDNOG00000024292) #28	ENSDNOG00000037925 #29	CHRM4 (ENSDNOG00000043079) #30	AMBRA1 (ENSDNOG00000049694) #31	ENSDNOG00000049497	HARBI1 (ENSDNOG00000002083) #32	ATG13 (ENSDNOG00000002084) #33	ARHGAP1 (ENSDNOG00000017314) #34	ZNF408 (ENSDNOG00000047669) #35	F2 (ENSDNOG00000012528) #36
Afrotheria	ANCESTRAL SPECIES	16	ENSGT00390000010991	ENSGT00390000006196	ENSGT00940000154860.j	ENSGT00940000157226	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Tenrec	MODERN SPECIES	2110															CRY2 (ENSETEG00000014601) #21	MAPK8IP1 (ENSETEG00000014603) #22	ENSETEG00000014607 #23	LARGE2 (ENSETEG00000014610) #24	PHF21A (ENSETEG00000014616) #25
Afrotheria_a	ANCESTRAL SPECIES	17	ENSGT00390000010991	ENSGT00390000006196	ENSGT00940000154860.j	ENSGT00940000157226	ENSGT00940000162841 #8	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000154234.b #36	ENSGT00390000014757 #37
Hyrax	MODERN SPECIES	1708															CRY2 (ENSPCAG00000015775) #21	MAPK8IP1 (ENSPCAG00000015871) #22	PEX16 (ENSPCAG00000015934) #23	LARGE2 (ENSPCAG00000016014) #24	PHF21A (ENSPCAG00000016138) #25
Elephant	MODERN SPECIES	209	API5 (ENSLAFG00000001688)	TTC17 (ENSLAFG00000001692)	ENSLAFG00000003439	ALKBH3 (ENSLAFG00000003441)	ACCSL (ENSLAFG00000014256) #8	ACCS (ENSLAFG00000010662)	EXT2 (ENSLAFG00000010668) #9	ALX4 (ENSLAFG00000010673) #10	TSPAN18 (ENSLAFG00000005533) #13	TP53I11 (ENSLAFG00000005709) #14	ENSLAFG00000001091 #16	SYT13 (ENSLAFG00000017702) #17	CHST1 (ENSLAFG00000009782) #18	SLC35C1 (ENSLAFG00000003806) #20	CRY2 (ENSLAFG00000027340) #21	MAPK8IP1 (ENSLAFG00000029841) #22	FREY1 (ENSLAFG00000031789)	PEX16 (ENSLAFG00000031489) #23	LARGE2 (ENSLAFG00000022018) #24	PHF21A (ENSLAFG00000003576) #25	CREB3L1 (ENSLAFG00000005092) #27	DGKZ (ENSLAFG00000015107) #28	MDK (ENSLAFG00000015119) #29	CHRM4 (ENSLAFG00000026552) #30	ENSLAFG00000030479 #31	ENSLAFG00000015123 #31	HARBI1 (ENSLAFG00000032359) #32	ATG13 (ENSLAFG00000015138) #33	ARHGAP1 (ENSLAFG00000015141) #34	ZNF408 (ENSLAFG00000027848) #35	F2 (ENSLAFG00000010383) #36
Marsupialia	ANCESTRAL SPECIES	7	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000164760	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00390000013899.b	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000164059	ENSGT00390000014757 #37	ENSGT00940000158287
Marsupialia_b	ANCESTRAL SPECIES	8	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000164760	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00390000013899.b	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00940000164059	ENSGT00390000014757 #37	ENSGT00940000158287	ENSGT00390000012935
Diprotodontia	ANCESTRAL SPECIES	46	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000164760	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00390000013899.b	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00940000164059	ENSGT00390000014757 #37	ENSGT00940000158287	ENSGT00390000012935
Diprotodontia_a	ANCESTRAL SPECIES	46	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000164760	ENSGT00940000161101	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00390000013899.b	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00940000164059	ENSGT00390000014757 #37	ENSGT00940000158287	ENSGT00390000012935
Common wonbat	MODERN SPECIES	1058	HSD17B12 (ENSVURG00010011495)	ALKBH3 (ENSVURG00010011481)	C11orf96 (ENSVURG00010011478)	ENSVURG00010011462	ACCS (ENSVURG00010011433)	EXT2 (ENSVURG00010011405) #9	ALX4 (ENSVURG00010011388) #10	CD82 (ENSVURG00010011375) #12	TSPAN18 (ENSVURG00010011338) #13	TP53I11 (ENSVURG00010011301) #14	PRDM11 (ENSVURG00010011272) #16	SYT13 (ENSVURG00010011263) #17	CHST1 (ENSVURG00010011252) #18	SLC35C1 (ENSVURG00010011245) #20	CRY2 (ENSVURG00010011233) #21	MAPK8IP1 (ENSVURG00010010986) #22	PEX16 (ENSVURG00010010942) #23	LARGE2 (ENSVURG00010010886) #24	PHF21A (ENSVURG00010010860) #25	CREB3L1 (ENSVURG00010010813) #27	DGKZ (ENSVURG00010010658) #28	MDK (ENSVURG00010010613) #29	CHRM4 (ENSVURG00010010600) #30	AMBRA1 (ENSVURG00010010523) #31	HARBI1 (ENSVURG00010010503) #32	ATG13 (ENSVURG00010010461) #33	ARHGAP1 (ENSVURG00010010440) #34	CKAP5 (ENSVURG00010010351) #37	LRP4 (ENSVURG00010010304)	CSTPP1 (ENSVURG00010010291)	ARFGAP2 (ENSVURG00010010235)
koala	MODERN SPECIES	139	C11orf96 (ENSPCIG00000021797)	ENSPCIG00000016360	ENSPCIG00000016363	ACCS (ENSPCIG00000016364)	EXT2 (ENSPCIG00000032707) #9	ALX4 (ENSPCIG00000036593) #10	ENSPCIG00000025054 #12	TSPAN18 (ENSPCIG00000025051) #13	ENSPCIG00000025050 #14	PRDM11 (ENSPCIG00000020145) #16	SYT13 (ENSPCIG00000020143) #17	ENSPCIG00000001772	CHST1 (ENSPCIG00000001789) #18	SLC35C1 (ENSPCIG00000020139) #20	CRY2 (ENSPCIG00000020134) #21	MAPK8IP1 (ENSPCIG00000020132) #22	PEX16 (ENSPCIG00000020128) #23	LARGE2 (ENSPCIG00000020123) #24	PHF21A (ENSPCIG00000020119) #25	CREB3L1 (ENSPCIG00000020114) #27	DGKZ (ENSPCIG00000020101) #28	MDK (ENSPCIG00000020100) #29	CHRM4 (ENSPCIG00000020098) #30	AMBRA1 (ENSPCIG00000020093) #31	HARBI1 (ENSPCIG00000020090) #32	ATG13 (ENSPCIG00000020075) #33	ARHGAP1 (ENSPCIG00000020071) #34	ENSPCIG00000020069	CKAP5 (ENSPCIG00000007436) #37	LRP4 (ENSPCIG00000007330)	CSTPP1 (ENSPCIG00000007328)
Wallaby	MODERN SPECIES	2976																ENSMEUG00000005666 #22	PEX16 (ENSMEUG00000005692) #23
Opossum	MODERN SPECIES	4	ENSMODG00000019866	ENSMODG00000019865	ENSMODG00000019867	EXT2 (ENSMODG00000019868) #9	ALX4 (ENSMODG00000019869) #10	CD82 (ENSMODG00000040483) #12	TSPAN18 (ENSMODG00000019871) #13	TP53I11 (ENSMODG00000019873) #14	PRDM11 (ENSMODG00000019874) #16	ENSMODG00000042658	SYT13 (ENSMODG00000019875) #17	ENSMODG00000019876	CHST1 (ENSMODG00000024450) #18	SLC35C1 (ENSMODG00000019878) #20	CRY2 (ENSMODG00000019881) #21	MAPK8IP1 (ENSMODG00000019877) #22	PEX16 (ENSMODG00000019884) #23	LARGE2 (ENSMODG00000019885) #24	PHF21A (ENSMODG00000019887) #25	ENSMODG00000046087	CREB3L1 (ENSMODG00000019888) #27	CHRM4 (ENSMODG00000019889) #30	AMBRA1 (ENSMODG00000019891) #31	HARBI1 (ENSMODG00000019892) #32	ATG13 (ENSMODG00000019893) #33	ARHGAP1 (ENSMODG00000019894) #34	ZNF408 (ENSMODG00000019895) #35	ENSMODG00000019896	CKAP5 (ENSMODG00000019897) #37	LRP4 (ENSMODG00000019898)	ENSMODG00000019900
Platypus	MODERN SPECIES	14	ENSOANG00000009210	ALKBH3 (ENSOANG00000009208)	ENSOANG00000037961	ACCS (ENSOANG00000040441)	EXT2 (ENSOANG00000003194) #9	ALX4 (ENSOANG00000037260) #10	CD82 (ENSOANG00000042613) #12	TSPAN18 (ENSOANG00000038384) #13	TP53I11 (ENSOANG00000042889) #14	PRDM11 (ENSOANG00000011927) #16	SYT13 (ENSOANG00000039954) #17	ENSOANG00000010924	CHST1 (ENSOANG00000051109) #18	SLC35C1 (ENSOANG00000005349) #20	CRY2 (ENSOANG00000005350) #21	MAPK8IP1 (ENSOANG00000038913) #22	ENSOANG00000046338	PEX16 (ENSOANG00000002458) #23	LARGE2 (ENSOANG00000005352) #24	PHF21A (ENSOANG00000005355) #25	CREB3L1 (ENSOANG00000005356) #27	DGKZ (ENSOANG00000003635) #28	MDK (ENSOANG00000037361) #29	CHRM4 (ENSOANG00000045540) #30	AMBRA1 (ENSOANG00000014521) #31	HARBI1 (ENSOANG00000004814) #32	ATG13 (ENSOANG00000006550) #33	ARHGAP1 (ENSOANG00000002770) #34	ENSOANG00000002767	CKAP5 (ENSOANG00000002765) #37	LRP4 (ENSOANG00000001954)
Sauria	ANCESTRAL SPECIES	3	ENSGT00950000183478	ENSGT00940000164760	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00930000151992	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000164059	ENSGT00390000014757.g #37	ENSGT00940000158287
Archelosauria	ANCESTRAL SPECIES	2	ENSGT00940000164760	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00930000151992	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161051.b.d	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000164059	ENSGT00390000014757.g #37	ENSGT00940000158287
Archosauria	ANCESTRAL SPECIES	5	ENSGT00940000164760	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00930000151992	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161051.b.d	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000164059	ENSGT00390000014757.g #37	ENSGT00940000158287
Aves	ANCESTRAL SPECIES	2	ENSGT00940000154629.B	ENSGT00390000003581	ENSGT00900000141110	ENSGT00390000003855.b	ENSGT00940000157441	ENSGT00940000153635.B	ENSGT00940000157624	ENSGT00940000166137	ENSGT00950000182985.a.a	ENSGT00390000016108	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000164059	ENSGT00390000014757.g #37	ENSGT00940000158287
Neognathae	ANCESTRAL SPECIES	4	ENSGT00940000154629.B	ENSGT00390000003581	ENSGT00900000141110	ENSGT00390000003855.b	ENSGT00940000157441	ENSGT00940000153635.B	ENSGT00940000157624	ENSGT00940000166137	ENSGT00950000182985.a.a	ENSGT00390000016108	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000164059	ENSGT00390000014757.g #37	ENSGT00940000158287
Galloanserae	ANCESTRAL SPECIES	4	ENSGT00940000154629.B	ENSGT00390000003581	ENSGT00900000141110	ENSGT00390000003855.b	ENSGT00940000157441	ENSGT00940000153635.B	ENSGT00940000157624	ENSGT00940000166137	ENSGT00950000182985.a.a	ENSGT00390000016108	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000164059	ENSGT00390000014757.g #37	ENSGT00940000158287
Anatidae	ANCESTRAL SPECIES	26	ENSGT00940000154629.B	ENSGT00390000003581	ENSGT00900000141110	ENSGT00390000003855.b	ENSGT00940000157441	ENSGT00940000153635.B	ENSGT00940000157624	ENSGT00940000166137	ENSGT00950000182985.a.a	ENSGT00390000016108	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000164059	ENSGT00390000014757.g #37	ENSGT00940000158287
Duck	MODERN SPECIES	3602															CRY2 (ENSAPLG00000004177) #21	MAPK8IP1 (ENSAPLG00000020964) #22	PEX16 (ENSAPLG00000003507) #23
Pink-footed goose	MODERN SPECIES	44	CHP1 (ENSABRG00000015776)	EXD1 (ENSABRG00000015771)	INO80 (ENSABRG00000015764)	CHAC1 (ENSABRG00000015761)	DLL4 (ENSABRG00000015757)	VPS18 (ENSABRG00000015753)	RHOV (ENSABRG00000015752)	ENSABRG00000015746	PPP1R14D (ENSABRG00000015744)	ZFYVE19 (ENSABRG00000015742)	ENSABRG00000015736	ENSABRG00000015723	CHST1 (ENSABRG00000015718) #18	SLC35C1 (ENSABRG00000015713) #20	CRY2 (ENSABRG00000015709) #21	MAPK8IP1 (ENSABRG00000015695) #22	PEX16 (ENSABRG00000015686) #23	LARGE2 (ENSABRG00000015677) #24	PHF21A (ENSABRG00000015666) #25	CREB3L1 (ENSABRG00000015657) #27	DGKZ (ENSABRG00000015580) #28	ENSABRG00000015542 #29	CHRM4 (ENSABRG00000015532) #30	AMBRA1 (ENSABRG00000015319) #31	HARBI1 (ENSABRG00000015289) #32	ATG13 (ENSABRG00000015023) #33	ARHGAP1 (ENSABRG00000014848) #34	ZNF408 (ENSABRG00000014838) #35	ENSABRG00000014826	CKAP5 (ENSABRG00000012270) #37	LRP4 (ENSABRG00000011397)
Phasianidae	ANCESTRAL SPECIES	4	ENSGT00940000154629.B	ENSGT00390000003581	ENSGT00900000141110	ENSGT00390000003855.b	ENSGT00940000157441	ENSGT00940000153635.B	ENSGT00940000157624	ENSGT00940000166137	ENSGT00950000182985.a.a	ENSGT00390000016108	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00940000164059	ENSGT00390000014757.g #37	ENSGT00940000158287	ENSGT00960000189374
Japanese quail	MODERN SPECIES	23	OIP5 (ENSCJPG00005014418)	CHP1 (ENSCJPG00005014417)	EXD1 (ENSCJPG00005014416)	INO80 (ENSCJPG00005014328)	CHAC1 (ENSCJPG00005014327)	DLL4 (ENSCJPG00005014326)	VPS18 (ENSCJPG00005014325)	RHOV (ENSCJPG00005014324)	ENSCJPG00005014323	ENSCJPG00005014322	ZFYVE19 (ENSCJPG00005014321)	ENSCJPG00005014320	CHST1 (ENSCJPG00005014319) #18	SLC35C1 (ENSCJPG00005014318) #20	CRY2 (ENSCJPG00005014317) #21	MAPK8IP1 (ENSCJPG00005014316) #22	PEX16 (ENSCJPG00005014314) #23	LARGE2 (ENSCJPG00005014313) #24	PHF21A (ENSCJPG00005013893) #25	CREB3L1 (ENSCJPG00005013892) #27	DGKZ (ENSCJPG00005013891) #28	MDK (ENSCJPG00005013890) #29	CHRM4 (ENSCJPG00005013889) #30	AMBRA1 (ENSCJPG00005013782) #31	HARBI1 (ENSCJPG00005013781) #32	ATG13 (ENSCJPG00005013688) #33	ARHGAP1 (ENSCJPG00005013573) #34	ENSCJPG00005013566	CKAP5 (ENSCJPG00005012374) #37	LRP4 (ENSCJPG00005012083)	ENSCJPG00005012080
Phasianidae_b	ANCESTRAL SPECIES	3	ENSGT00940000154629.B	ENSGT00390000003581	ENSGT00900000141110	ENSGT00390000003855.b	ENSGT00940000157441	ENSGT00940000153635.B	ENSGT00940000157624	ENSGT00940000166137	ENSGT00950000182985.a.a	ENSGT00390000016108	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00940000164059	ENSGT00390000014757.g #37	ENSGT00940000158287	ENSGT00390000012935
Chicken	MODERN SPECIES	34	CHP1 (ENSGALG00010022451)	EXD1 (ENSGALG00010022426)	CHAC1 (ENSGALG00010022412)	INO80 (ENSGALG00010022316)	DLL4 (ENSGALG00010022311)	VPS18 (ENSGALG00010022297)	RHOV (ENSGALG00010022246)	SPINT1 (ENSGALG00010022240)	PPP1R14D (ENSGALG00010022220)	ZFYVE19 (ENSGALG00010022209)	ENSGALG00010022201	ENSGALG00010022194	CHST1 (ENSGALG00010022135) #18	SLC35C1 (ENSGALG00010022087) #20	CRY2 (ENSGALG00010022046) #21	MAPK8IP1 (ENSGALG00010022041) #22	C11orf94 (ENSGALG00010022000)	PEX16 (ENSGALG00010021965) #23	ENSGALG00010021962	LARGE2 (ENSGALG00010021848) #24	PHF21A (ENSGALG00010021790) #25	CREB3L1 (ENSGALG00010023217) #27	DGKZ (ENSGALG00010023196) #28	MDK (ENSGALG00010023136) #29	CHRM4 (ENSGALG00010023120) #30	AMBRA1 (ENSGALG00010023866) #31	HARBI1 (ENSGALG00010023083) #32	ATG13 (ENSGALG00010023064) #33	ARHGAP1 (ENSGALG00010022997) #34	F2 (ENSGALG00010022987)	CKAP5 (ENSGALG00010022971) #37
Turkey	MODERN SPECIES	25	ENSMGAG00000010880 #37	ENSMGAG00000010924	ENSMGAG00000020851 #37	ENSMGAG00000010945 #34	ENSMGAG00000010974 #33	ENSMGAG00000010995 #32	ENSMGAG00000010997 #31	MDK (ENSMGAG00000011008) #29	ENSMGAG00000015803 #30	ENSMGAG00000017332 #31	ENSMGAG00000011016 #28	CREB3L1 (ENSMGAG00000011042) #27	ENSMGAG00000021734 #25	LARGE2 (ENSMGAG00000011066) #24	PHF21A (ENSMGAG00000011052) #25	ENSMGAG00000011085 #22	ENSMGAG00000011076 #23	ENSMGAG00000011088 #21	ENSMGAG00000011099 #20	ENSMGAG00000021832	ENSMGAG00000015808 #18	ENSMGAG00000011107	ENSMGAG00000011125	ZFYVE19 (ENSMGAG00000011119)	ENSMGAG00000011131	ENSMGAG00000011126	VPS18 (ENSMGAG00000011138)	ENSMGAG00000011145	ENSMGAG00000011164	ENSMGAG00000011179	CHP1 (ENSMGAG00000011182)
Neognathae_b	ANCESTRAL SPECIES	6	ENSGT00940000154629.B	ENSGT00390000003581	ENSGT00900000141110	ENSGT00390000003855.b	ENSGT00940000157441	ENSGT00940000153635.B	ENSGT00940000157624	ENSGT00940000166137	ENSGT00950000182985.a.a	ENSGT00390000016108	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000164059	ENSGT00390000014757.g #37	ENSGT00940000158287
Passeriformes	ANCESTRAL SPECIES	5	ENSGT00940000154267.A	ENSGT00940000154629.B	ENSGT00900000141110	ENSGT00390000003855.b	ENSGT00940000157441	ENSGT00940000153635.B	ENSGT00940000157624	ENSGT00940000166137	ENSGT00950000182985.a.a	ENSGT00390000016108	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00940000164059	ENSGT00390000014757.g #37	ENSGT00940000158287	ENSGT00960000189374
Great tit	MODERN SPECIES	25	NUSAP1 (ENSPMJG00000014408)	OIP5 (ENSPMJG00000014399)	CHP1 (ENSPMJG00000014398)	INO80 (ENSPMJG00000014395)	CHAC1 (ENSPMJG00000014394)	DLL4 (ENSPMJG00000014392)	VPS18 (ENSPMJG00000014390)	RHOV (ENSPMJG00000014388)	ENSPMJG00000014387	ZFYVE19 (ENSPMJG00000014386)	ENSPMJG00000014385	ENSPMJG00000014384	CHST1 (ENSPMJG00000014383) #18	ENSPMJG00000014382	CRY2 (ENSPMJG00000014381) #21	MAPK8IP1 (ENSPMJG00000014380) #22	PEX16 (ENSPMJG00000014379) #23	LARGE2 (ENSPMJG00000014378) #24	PHF21A (ENSPMJG00000014377) #25	CREB3L1 (ENSPMJG00000014375) #27	DGKZ (ENSPMJG00000014374) #28	MDK (ENSPMJG00000014373) #29	CHRM4 (ENSPMJG00000014372) #30	AMBRA1 (ENSPMJG00000013872) #31	HARBI1 (ENSPMJG00000013871) #32	ATG13 (ENSPMJG00000013870) #33	ARHGAP1 (ENSPMJG00000013679) #34	ENSPMJG00000013670	CKAP5 (ENSPMJG00000012334) #37	LRP4 (ENSPMJG00000012302)	ENSPMJG00000012301
Passeriformes_d	ANCESTRAL SPECIES	5	ENSGT00940000154267.A	ENSGT00940000154629.B	ENSGT00900000141110	ENSGT00390000003855.b	ENSGT00940000157441	ENSGT00940000153635.B	ENSGT00940000157624	ENSGT00940000166137	ENSGT00950000182985.a.a	ENSGT00390000016108	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00940000164059	ENSGT00390000014757.g #37	ENSGT00940000158287	ENSGT00960000189374
Flycatcher	MODERN SPECIES	24	ENSFALG00000026284	CHP1 (ENSFALG00000023422)	INO80 (ENSFALG00000006125)	CHAC1 (ENSFALG00000006130)	DLL4 (ENSFALG00000006133)	VPS18 (ENSFALG00000006138)	RHOV (ENSFALG00000006141)	ENSFALG00000006144	ENSFALG00000026148	PPP1R14D (ENSFALG00000024489)	ZFYVE19 (ENSFALG00000026694)	ENSFALG00000006163	ENSFALG00000014198	CHST1 (ENSFALG00000014200) #18	CRY2 (ENSFALG00000006176) #21	MAPK8IP1 (ENSFALG00000006196) #22	PEX16 (ENSFALG00000025565) #23	LARGE2 (ENSFALG00000006222) #24	PHF21A (ENSFALG00000006238) #25	CREB3L1 (ENSFALG00000006242) #27	DGKZ (ENSFALG00000006244) #28	MDK (ENSFALG00000006248) #29	CHRM4 (ENSFALG00000014204) #30	AMBRA1 (ENSFALG00000006252) #31	HARBI1 (ENSFALG00000028036) #32	ATG13 (ENSFALG00000006261) #33	ARHGAP1 (ENSFALG00000006265) #34	ENSFALG00000006272	CKAP5 (ENSFALG00000006282) #37	LRP4 (ENSFALG00000006286)	ENSFALG00000025106
Passeriformes_g	ANCESTRAL SPECIES		ENSGT00940000154267.A	ENSGT00940000154629.B	ENSGT00900000141110	ENSGT00390000003855.b	ENSGT00940000157441	ENSGT00940000153635.B	ENSGT00940000157624	ENSGT00940000166137	ENSGT00950000182985.a.a	ENSGT00390000016108	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00940000164059	ENSGT00390000014757.g #37	ENSGT00940000158287	ENSGT00390000012935
Medium ground finch	MODERN SPECIES	15	ENSGFOG00000002210	CHP1 (ENSGFOG00000002223)	ENSGFOG00000002236	INO80 (ENSGFOG00000002244)	CHAC1 (ENSGFOG00000002253)	DLL4 (ENSGFOG00000002266)	VPS18 (ENSGFOG00000002282)	RHOV (ENSGFOG00000002290)	ENSGFOG00000002296	ENSGFOG00000002316	ZFYVE19 (ENSGFOG00000002326)	ENSGFOG00000002356	ENSGFOG00000002380	CHST1 (ENSGFOG00000002388) #18	CRY2 (ENSGFOG00000002417) #21	MAPK8IP1 (ENSGFOG00000002521) #22	PEX16 (ENSGFOG00000002552) #23	LARGE2 (ENSGFOG00000002573) #24	PHF21A (ENSGFOG00000002605) #25	CREB3L1 (ENSGFOG00000000033) #27	DGKZ (ENSGFOG00000000238) #28	MDK (ENSGFOG00000005000) #29	CHRM4 (ENSGFOG00000005010) #30	AMBRA1 (ENSGFOG00000005019) #31	HARBI1 (ENSGFOG00000005030) #32	ATG13 (ENSGFOG00000005043) #33	ARHGAP1 (ENSGFOG00000005074) #34	ENSGFOG00000005094	CKAP5 (ENSGFOG00000005139) #37	LRP4 (ENSGFOG00000005261)	CSTPP1 (ENSGFOG00000005426)
Passeroidea	ANCESTRAL SPECIES	1	ENSGT00940000154267.A	ENSGT00940000154629.B	ENSGT00900000141110	ENSGT00390000003855.b	ENSGT00940000157441	ENSGT00940000153635.B	ENSGT00940000157624	ENSGT00940000166137	ENSGT00950000182985.a.a	ENSGT00390000016108	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00940000164059	ENSGT00390000014757.g #37	ENSGT00940000158287	ENSGT00390000012935
Zebra finch	MODERN SPECIES	27	ENSTGUG00000020477	CHP1 (ENSTGUG00000010812)	CHAC1 (ENSTGUG00000026755)	INO80 (ENSTGUG00000010786)	DLL4 (ENSTGUG00000010777)	VPS18 (ENSTGUG00000010775)	RHOV (ENSTGUG00000010772)	ENSTGUG00000010764	PPP1R14D (ENSTGUG00000021458)	ZFYVE19 (ENSTGUG00000010756)	ENSTGUG00000010750	ENSTGUG00000027093	CHST1 (ENSTGUG00000010745) #18	SLC35C1 (ENSTGUG00000010741) #20	CRY2 (ENSTGUG00000010722) #21	MAPK8IP1 (ENSTGUG00000010712) #22	PEX16 (ENSTGUG00000010706) #23	LARGE2 (ENSTGUG00000010689) #24	PHF21A (ENSTGUG00000010680) #25	CREB3L1 (ENSTGUG00000010669) #27	DGKZ (ENSTGUG00000010647) #28	MDK (ENSTGUG00000010641) #29	CHRM4 (ENSTGUG00000010635) #30	AMBRA1 (ENSTGUG00000010628) #31	HARBI1 (ENSTGUG00000010627) #32	ATG13 (ENSTGUG00000010603) #33	ARHGAP1 (ENSTGUG00000010593) #34	ENSTGUG00000010580	CKAP5 (ENSTGUG00000023569) #37	LRP4 (ENSTGUG00000010533)	CSTPP1 (ENSTGUG00000010527)
Common canary	MODERN SPECIES	3	ENSSCAG00000002502	CHP1 (ENSSCAG00000002509)	INO80 (ENSSCAG00000002520)	CHAC1 (ENSSCAG00000002530)	DLL4 (ENSSCAG00000002541)	VPS18 (ENSSCAG00000002552)	RHOV (ENSSCAG00000002561)	ENSSCAG00000002568	ENSSCAG00000002575	ZFYVE19 (ENSSCAG00000002580)	ENSSCAG00000002589	ENSSCAG00000002593	CHST1 (ENSSCAG00000002594) #18	SLC35C1 (ENSSCAG00000002601) #20	CRY2 (ENSSCAG00000002603) #21	MAPK8IP1 (ENSSCAG00000002608) #22	PEX16 (ENSSCAG00000002612) #23	ENSSCAG00000002614	LARGE2 (ENSSCAG00000002619) #24	PHF21A (ENSSCAG00000002624) #25	CREB3L1 (ENSSCAG00000002634) #27	DGKZ (ENSSCAG00000002643) #28	MDK (ENSSCAG00000002680) #29	CHRM4 (ENSSCAG00000002686) #30	AMBRA1 (ENSSCAG00000002743) #31	HARBI1 (ENSSCAG00000002978) #32	ATG13 (ENSSCAG00000002981) #33	ARHGAP1 (ENSSCAG00000002990) #34	ENSSCAG00000003007	CKAP5 (ENSSCAG00000003039) #37	LRP4 (ENSSCAG00000003129)
Neognathae_c	ANCESTRAL SPECIES	6	ENSGT00940000154629.B	ENSGT00390000003581	ENSGT00900000141110	ENSGT00390000003855.b	ENSGT00940000157441	ENSGT00940000153635.B	ENSGT00940000157624	ENSGT00940000166137	ENSGT00950000182985.a.a	ENSGT00390000016108	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000164059	ENSGT00390000014757.g #37	ENSGT00940000158287
Golden eagle	MODERN SPECIES	11	EXD1 (ENSACCG00020007115)	INO80 (ENSACCG00020007139)	CHAC1 (ENSACCG00020007162)	DLL4 (ENSACCG00020007171)	VPS18 (ENSACCG00020007188)	RHOV (ENSACCG00020007200)	ENSACCG00020007210	ENSACCG00020007226	ZFYVE19 (ENSACCG00020007236)	ENSACCG00020007249	ENSACCG00020007270	CHST1 (ENSACCG00020007275) #18	ENSACCG00020007301	SLC35C1 (ENSACCG00020007307) #20	CRY2 (ENSACCG00020007326) #21	MAPK8IP1 (ENSACCG00020007363) #22	PEX16 (ENSACCG00020007429) #23	LARGE2 (ENSACCG00020007454) #24	PHF21A (ENSACCG00020007479) #25	CREB3L1 (ENSACCG00020007513) #27	DGKZ (ENSACCG00020007561) #28	MDK (ENSACCG00020007651) #29	CHRM4 (ENSACCG00020007659) #30	AMBRA1 (ENSACCG00020007670) #31	HARBI1 (ENSACCG00020007689) #32	ATG13 (ENSACCG00020007724) #33	ARHGAP1 (ENSACCG00020007772) #34	ZNF408 (ENSACCG00020007780) #35	ENSACCG00020007794	CKAP5 (ENSACCG00020007836) #37	LRP4 (ENSACCG00020008390)
Kakapo	MODERN SPECIES	21	CHP1 (ENSSHBG00005004252)	EXD1 (ENSSHBG00005004239)	INO80 (ENSSHBG00005004213)	CHAC1 (ENSSHBG00005004189)	DLL4 (ENSSHBG00005004174)	VPS18 (ENSSHBG00005004165)	RHOV (ENSSHBG00005004155)	ENSSHBG00005004144	PPP1R14D (ENSSHBG00005004135)	ZFYVE19 (ENSSHBG00005004125)	ENSSHBG00005004111	ENSSHBG00005004102	CHST1 (ENSSHBG00005004094) #18	SLC35C1 (ENSSHBG00005004078) #20	CRY2 (ENSSHBG00005004067) #21	MAPK8IP1 (ENSSHBG00005004053) #22	PEX16 (ENSSHBG00005004041) #23	LARGE2 (ENSSHBG00005004024) #24	PHF21A (ENSSHBG00005004004) #25	CREB3L1 (ENSSHBG00005003978) #27	DGKZ (ENSSHBG00005003935) #28	MDK (ENSSHBG00005003898) #29	CHRM4 (ENSSHBG00005003882) #30	AMBRA1 (ENSSHBG00005003842) #31	HARBI1 (ENSSHBG00005003802) #32	ATG13 (ENSSHBG00005003785) #33	ARHGAP1 (ENSSHBG00005003766) #34	ENSSHBG00005003750	CKAP5 (ENSSHBG00005003723) #37	LRP4 (ENSSHBG00005003580)	CSTPP1 (ENSSHBG00005003475)
African ostrich	MODERN SPECIES	958	NUSAP1 (ENSSCUG00000017633)	CHP1 (ENSSCUG00000017632)	EXD1 (ENSSCUG00000017631)	INO80 (ENSSCUG00000017629)	CHAC1 (ENSSCUG00000017628)	DLL4 (ENSSCUG00000017626)	VPS18 (ENSSCUG00000017624)	RHOV (ENSSCUG00000017623)	ENSSCUG00000017621	ENSSCUG00000017620	ZFYVE19 (ENSSCUG00000017619)	ENSSCUG00000017618	ENSSCUG00000017617	CHST1 (ENSSCUG00000017615) #18	CRY2 (ENSSCUG00000017614) #21	MAPK8IP1 (ENSSCUG00000017613) #22	PEX16 (ENSSCUG00000017612) #23	LARGE2 (ENSSCUG00000017610) #24	PHF21A (ENSSCUG00000017608) #25	CREB3L1 (ENSSCUG00000017607) #27	DGKZ (ENSSCUG00000017605) #28	MDK (ENSSCUG00000017601) #29	CHRM4 (ENSSCUG00000017599) #30	AMBRA1 (ENSSCUG00000017598) #31	HARBI1 (ENSSCUG00000017597) #32	ATG13 (ENSSCUG00000017596) #33	ARHGAP1 (ENSSCUG00000017595) #34	ZNF408 (ENSSCUG00000017594) #35
Australian saltwater crocodile	MODERN SPECIES	64	ENSCPRG00005011338	EXT2 (ENSCPRG00005011390) #9	ALX4 (ENSCPRG00005011563) #10	CD82 (ENSCPRG00005011637) #12	TSPAN18 (ENSCPRG00005011666) #13	TP53I11 (ENSCPRG00005011670) #14	PRDM11 (ENSCPRG00005011712) #16	SYT13 (ENSCPRG00005011716) #17	ENSCPRG00005011755	ENSCPRG00005011758	ENSCPRG00005011761	ENSCPRG00005011790	CHST1 (ENSCPRG00005011793) #18	SLC35C1 (ENSCPRG00005011817) #20	CRY2 (ENSCPRG00005011818) #21	MAPK8IP1 (ENSCPRG00005011827) #22	PEX16 (ENSCPRG00005011836) #23	LARGE2 (ENSCPRG00005011840) #24	PHF21A (ENSCPRG00005011871) #25	CREB3L1 (ENSCPRG00005011938) #27	ENSCPRG00005011946	DGKZ (ENSCPRG00005012247) #28	MDK (ENSCPRG00005013793) #29	CHRM4 (ENSCPRG00005013799) #30	AMBRA1 (ENSCPRG00005013805) #31	HARBI1 (ENSCPRG00005013808) #32	ATG13 (ENSCPRG00005013813) #33	ARHGAP1 (ENSCPRG00005013849) #34	ZNF408 (ENSCPRG00005013908) #35	ENSCPRG00005013914	CKAP5 (ENSCPRG00005014039) #37
Cryptodira	ANCESTRAL SPECIES	3	ENSGT00950000183478	ENSGT00940000164760	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161051.b.d.a	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000164059	ENSGT00390000014757.g #37	ENSGT00940000158287
Testudinoidea	ANCESTRAL SPECIES	3	ENSGT00940000164760	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161051.b.d.a	ENSGT00940000161051.b.e	ENSGT00940000161051.b.d.b	ENSGT00390000013899.b	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000164059	ENSGT00390000014757.g #37	ENSGT00940000158287
Emydidae	ANCESTRAL SPECIES	2	ENSGT00940000164760	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161051.b.d.a	ENSGT00940000161051.b.e	ENSGT00940000161051.b.d.b	ENSGT00390000013899.b	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000164059	ENSGT00390000014757.g #37	ENSGT00940000158287
painted turtle	MODERN SPECIES	13	ENSCPBG00000012580	EXT2 (ENSCPBG00000012585) #9	ALX4 (ENSCPBG00000012590) #10	CD82 (ENSCPBG00000012593) #12	TSPAN18 (ENSCPBG00000012596) #13	TP53I11 (ENSCPBG00000012600) #14	PRDM11 (ENSCPBG00000012601) #16	SYT13 (ENSCPBG00000012602) #17	ENSCPBG00000012603	ENSCPBG00000012605	ENSCPBG00000012607	ENSCPBG00000012613	CHST1 (ENSCPBG00000012615) #18	SLC35C1 (ENSCPBG00000012617) #20	CRY2 (ENSCPBG00000012619) #21	MAPK8IP1 (ENSCPBG00000012622) #22	PEX16 (ENSCPBG00000012625) #23	LARGE2 (ENSCPBG00000012627) #24	PHF21A (ENSCPBG00000012630) #25	CREB3L1 (ENSCPBG00000012636) #27	DGKZ (ENSCPBG00000012640) #28	MDK (ENSCPBG00000012660) #29	CHRM4 (ENSCPBG00000012662) #30	AMBRA1 (ENSCPBG00000012667) #31	HARBI1 (ENSCPBG00000012670) #32	ATG13 (ENSCPBG00000012673) #33	ARHGAP1 (ENSCPBG00000012676) #34	ZNF408 (ENSCPBG00000012683) #35	ENSCPBG00000012688	CKAP5 (ENSCPBG00000012821) #37	LRP4 (ENSCPBG00000015397)
Three-toed box turtle	MODERN SPECIES	40	C11orf96 (ENSTMTG00000009151)	ENSTMTG00000009155	EXT2 (ENSTMTG00000009184) #9	ALX4 (ENSTMTG00000009213) #10	CD82 (ENSTMTG00000000072) #12	TSPAN18 (ENSTMTG00000000107) #13	TP53I11 (ENSTMTG00000000133) #14	PRDM11 (ENSTMTG00000000166) #16	SYT13 (ENSTMTG00000000209) #17	ENSTMTG00000000261	ENSTMTG00000000324	ENSTMTG00000000366	CHST1 (ENSTMTG00000000417) #18	SLC35C1 (ENSTMTG00000000435) #20	CRY2 (ENSTMTG00000000450) #21	MAPK8IP1 (ENSTMTG00000000485) #22	PEX16 (ENSTMTG00000000523) #23	LARGE2 (ENSTMTG00000000547) #24	PHF21A (ENSTMTG00000000574) #25	CREB3L1 (ENSTMTG00000000596) #27	DGKZ (ENSTMTG00000000674) #28	MDK (ENSTMTG00000000793) #29	CHRM4 (ENSTMTG00000000807) #30	AMBRA1 (ENSTMTG00000000819) #31	HARBI1 (ENSTMTG00000000846) #32	ATG13 (ENSTMTG00000000864) #33	ARHGAP1 (ENSTMTG00000000921) #34	ENSTMTG00000000932	ENSTMTG00000000941	CKAP5 (ENSTMTG00000000970) #37	LRP4 (ENSTMTG00000001223)
Testudinidae	ANCESTRAL SPECIES	2	ENSGT00940000164760	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161051.b.d.a	ENSGT00940000161051.b.e	ENSGT00940000161051.b.d.b	ENSGT00390000013899.b	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000164059	ENSGT00390000014757.g.c #37	ENSGT00940000158287
Abingdon island giant tortoise	MODERN SPECIES	401											ENSCABG00000013755	ENSCABG00000013753	CHST1 (ENSCABG00000013752) #18	SLC35C1 (ENSCABG00000013747) #20	CRY2 (ENSCABG00000013745) #21	MAPK8IP1 (ENSCABG00000013742) #22	PEX16 (ENSCABG00000013740) #23	LARGE2 (ENSCABG00000013738) #24	PHF21A (ENSCABG00000013619) #25	CREB3L1 (ENSCABG00000013591) #27	DGKZ (ENSCABG00000010486) #28	MDK (ENSCABG00000010413) #29	CHRM4 (ENSCABG00000010411) #30	AMBRA1 (ENSCABG00000010410) #31	HARBI1 (ENSCABG00000010409) #32	ATG13 (ENSCABG00000010407) #33	ARHGAP1 (ENSCABG00000010406) #34	ZNF408 (ENSCABG00000010405) #35	ENSCABG00000010404	ENSCABG00000010356 #37
Goode s thornscrub tortoise	MODERN SPECIES	18	ENSGEVG00005014034	EXT2 (ENSGEVG00005013950) #9	ALX4 (ENSGEVG00005013888) #10	CD82 (ENSGEVG00005013867) #12	TSPAN18 (ENSGEVG00005013791) #13	TP53I11 (ENSGEVG00005013726) #14	PRDM11 (ENSGEVG00005013687) #16	SYT13 (ENSGEVG00005013529) #17	ENSGEVG00005013341	ENSGEVG00005013168	ENSGEVG00005012968	ENSGEVG00005012924	CHST1 (ENSGEVG00005012904) #18	SLC35C1 (ENSGEVG00005012889) #20	CRY2 (ENSGEVG00005012859) #21	MAPK8IP1 (ENSGEVG00005012653) #22	PEX16 (ENSGEVG00005012603) #23	LARGE2 (ENSGEVG00005012556) #24	PHF21A (ENSGEVG00005012493) #25	CREB3L1 (ENSGEVG00005012256) #27	DGKZ (ENSGEVG00005011914) #28	MDK (ENSGEVG00005011735) #29	CHRM4 (ENSGEVG00005011709) #30	AMBRA1 (ENSGEVG00005011573) #31	HARBI1 (ENSGEVG00005011393) #32	ATG13 (ENSGEVG00005011349) #33	ARHGAP1 (ENSGEVG00005011311) #34	ZNF408 (ENSGEVG00005011280) #35	ENSGEVG00005011016	CKAP5 (ENSGEVG00005010815) #37	LRP4 (ENSGEVG00005010404)
Chinese turtle	MODERN SPECIES	1173	ENSPSIG00000011971	EXT2 (ENSPSIG00000012310) #9	ALX4 (ENSPSIG00000012524) #10	CD82 (ENSPSIG00000012591) #12	TSPAN18 (ENSPSIG00000012726) #13	TP53I11 (ENSPSIG00000012730) #14	ENSPSIG00000012784 #16	ENSPSIG00000001826 #16	SYT13 (ENSPSIG00000012824) #17	ENSPSIG00000012857	ENSPSIG00000012922	ENSPSIG00000001830	CHST1 (ENSPSIG00000001832) #18	SLC35C1 (ENSPSIG00000012962) #20	CRY2 (ENSPSIG00000012972) #21	MAPK8IP1 (ENSPSIG00000013107) #22	PEX16 (ENSPSIG00000013249) #23	LARGE2 (ENSPSIG00000013334) #24	PHF21A (ENSPSIG00000013428) #25
Lepidosauria	ANCESTRAL SPECIES	10	ENSGT00950000183478	ENSGT00940000164760	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481 #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00930000151992	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000164059	ENSGT00390000014757.g #37	ENSGT00940000158287
Episquamata	ANCESTRAL SPECIES		ENSGT00950000183478	ENSGT00940000164760	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481.g #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00930000151992	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000164059	ENSGT00390000014757.g #37	ENSGT00940000158287
Laterata	ANCESTRAL SPECIES	2	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000164760	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481.g #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000164059	ENSGT00390000014757.g #37	ENSGT00940000158287
Common wall lizard	MODERN SPECIES		C11orf96 (ENSPMRG00000014805)	ENSPMRG00000014791	EXT2 (ENSPMRG00000014776) #9	ALX4 (ENSPMRG00000014763) #10	CD82 (ENSPMRG00000014744) #12	ENSPMRG00000014731	TSPAN18 (ENSPMRG00000014727) #13	TP53I11 (ENSPMRG00000014716) #14	PRDM11 (ENSPMRG00000014709) #16	SYT13 (ENSPMRG00000014700) #17	ENSPMRG00000014692	ENSPMRG00000014684	CHST1 (ENSPMRG00000014681) #18	SLC35C1 (ENSPMRG00000014679) #20	CRY2 (ENSPMRG00000014673) #21	MAPK8IP1 (ENSPMRG00000014660) #22	PEX16 (ENSPMRG00000014649) #23	LARGE2 (ENSPMRG00000014630) #24	PHF21A (ENSPMRG00000014609) #25	CREB3L1 (ENSPMRG00000014591) #27	DGKZ (ENSPMRG00000012726) #28	ENSPMRG00000012478	MDK (ENSPMRG00000012465) #29	CHRM4 (ENSPMRG00000012456) #30	AMBRA1 (ENSPMRG00000012441) #31	HARBI1 (ENSPMRG00000012436) #32	ATG13 (ENSPMRG00000012377) #33	ARHGAP1 (ENSPMRG00000012280) #34	ZNF408 (ENSPMRG00000012272) #35	ENSPMRG00000012267	CKAP5 (ENSPMRG00000012212) #37
Argentine black and white tegu	MODERN SPECIES	3	ENSSMRG00000005022	EXT2 (ENSSMRG00000005057) #9	ALX4 (ENSSMRG00000005074) #10	ENSSMRG00000005121	ENSSMRG00000005130 #12	ENSSMRG00000005143	TSPAN18 (ENSSMRG00000005149) #13	TP53I11 (ENSSMRG00000005157) #14	PRDM11 (ENSSMRG00000005163) #16	SYT13 (ENSSMRG00000005208) #17	ENSSMRG00000005354	ENSSMRG00000005379	CHST1 (ENSSMRG00000005418) #18	SLC35C1 (ENSSMRG00000005444) #20	CRY2 (ENSSMRG00000005452) #21	MAPK8IP1 (ENSSMRG00000005458) #22	PEX16 (ENSSMRG00000005465) #23	LARGE2 (ENSSMRG00000005495) #24	PHF21A (ENSSMRG00000005500) #25	CREB3L1 (ENSSMRG00000005539) #27	DGKZ (ENSSMRG00000005548) #28	MDK (ENSSMRG00000005607) #29	CHRM4 (ENSSMRG00000005613) #30	AMBRA1 (ENSSMRG00000005709) #31	HARBI1 (ENSSMRG00000005723) #32	ATG13 (ENSSMRG00000005818) #33	ARHGAP1 (ENSSMRG00000005826) #34	ZNF408 (ENSSMRG00000005829) #35	ENSSMRG00000005831	CKAP5 (ENSSMRG00000005833) #37	LRP4 (ENSSMRG00000005929)
Toxicofera	ANCESTRAL SPECIES	5	ENSGT00390000016821	ENSGT00950000183478	ENSGT00940000164760	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481.g #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00930000151992	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161051.b.e	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000164059	ENSGT00390000014757.g #37	ENSGT00940000158287
Elapidae	ANCESTRAL SPECIES	3	ENSGT00390000016821	ENSGT00950000183478	ENSGT00940000164760	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481.g #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00930000151992	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161051.b.e	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00940000164059	ENSGT00930000151062 #35	ENSGT00390000014757.g #37	ENSGT00940000158287
Elapidae_a	ANCESTRAL SPECIES	4	ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000164760	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481.g #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161051.b.e	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00940000164059	ENSGT00390000014757.g #37	ENSGT00940000158287	ENSGT00960000189374
Acanthophiinae	ANCESTRAL SPECIES	6	ENSGT00940000154860	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000164760	ENSGT00940000156620 #9	ENSGT00940000159662 #10	ENSGT00940000158481.g #12	ENSGT00940000157667 #13	ENSGT00390000017249 #14	ENSGT00940000159837 #16	ENSGT00940000160226 #17	ENSGT00940000161051.b.e	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT00940000160630 #34	ENSGT00940000164059	ENSGT00390000014757.g #37	ENSGT00940000158287	ENSGT00960000189374
Eastern brown snake	MODERN SPECIES	1	ENSPTXG00000008689	ALKBH3 (ENSPTXG00000008690)	C11orf96 (ENSPTXG00000008691)	ENSPTXG00000008692	EXT2 (ENSPTXG00000008693) #9	ALX4 (ENSPTXG00000008695) #10	ENSPTXG00000008696 #12	TSPAN18 (ENSPTXG00000008697) #13	TP53I11 (ENSPTXG00000008698) #14	PRDM11 (ENSPTXG00000008699) #16	SYT13 (ENSPTXG00000008700) #17	ENSPTXG00000008705	CHST1 (ENSPTXG00000008707) #18	SLC35C1 (ENSPTXG00000008708) #20	CRY2 (ENSPTXG00000008709) #21	MAPK8IP1 (ENSPTXG00000008710) #22	PEX16 (ENSPTXG00000008712) #23	LARGE2 (ENSPTXG00000008713) #24	PHF21A (ENSPTXG00000008714) #25	CREB3L1 (ENSPTXG00000008716) #27	DGKZ (ENSPTXG00000008729) #28	MDK (ENSPTXG00000011934) #29	CHRM4 (ENSPTXG00000011936) #30	AMBRA1 (ENSPTXG00000011938) #31	HARBI1 (ENSPTXG00000011941) #32	ATG13 (ENSPTXG00000011942) #33	ARHGAP1 (ENSPTXG00000011944) #34	ENSPTXG00000011946	CKAP5 (ENSPTXG00000011950) #37	LRP4 (ENSPTXG00000011966)	CSTPP1 (ENSPTXG00000011967)
Mainland tiger snake	MODERN SPECIES	36										PRDM11 (ENSNSUG00000018417) #16	SYT13 (ENSNSUG00000018415) #17	ENSNSUG00000018414	CHST1 (ENSNSUG00000018413) #18	SLC35C1 (ENSNSUG00000018411) #20	CRY2 (ENSNSUG00000018400) #21	MAPK8IP1 (ENSNSUG00000018399) #22	PEX16 (ENSNSUG00000018398) #23	LARGE2 (ENSNSUG00000018294) #24	PHF21A (ENSNSUG00000018220) #25	CREB3L1 (ENSNSUG00000018219) #27	DGKZ (ENSNSUG00000017845) #28	MDK (ENSNSUG00000017844) #29	CHRM4 (ENSNSUG00000017843) #30	AMBRA1 (ENSNSUG00000017836) #31	HARBI1 (ENSNSUG00000017831) #32	ATG13 (ENSNSUG00000017819) #33	ARHGAP1 (ENSNSUG00000017818) #34	ENSNSUG00000017817	CKAP5 (ENSNSUG00000017815) #37	LRP4 (ENSNSUG00000017814)	ENSNSUG00000017813
Blue-lipped sea krait	MODERN SPECIES	1420																MAPK8IP1 (ENSLLTG00000002287) #22
Indian cobra	MODERN SPECIES		ENSNNAG00000010340	ENSNNAG00000010452	EXT2 (ENSNNAG00000010463) #9	ALX4 (ENSNNAG00000010499) #10	ENSNNAG00000010552 #12	TSPAN18 (ENSNNAG00000010573) #13	ENSNNAG00000010595 #14	PRDM11 (ENSNNAG00000010628) #16	ENSNNAG00000010688	SYT13 (ENSNNAG00000010715) #17	ENSNNAG00000010840	CHST1 (ENSNNAG00000010881) #18	ENSNNAG00000010894	SLC35C1 (ENSNNAG00000010949) #20	CRY2 (ENSNNAG00000010955) #21	MAPK8IP1 (ENSNNAG00000011005) #22	PEX16 (ENSNNAG00000011154) #23	LARGE2 (ENSNNAG00000011188) #24	PHF21A (ENSNNAG00000011244) #25	ENSNNAG00000011351	CREB3L1 (ENSNNAG00000011364) #27	DGKZ (ENSNNAG00000011459) #28	MDK (ENSNNAG00000011865) #29	CHRM4 (ENSNNAG00000011899) #30	AMBRA1 (ENSNNAG00000011933) #31	HARBI1 (ENSNNAG00000012072) #32	ATG13 (ENSNNAG00000012104) #33	ARHGAP1 (ENSNNAG00000012386) #34	ENSNNAG00000012433	ENSNNAG00000012596 #35	CKAP5 (ENSNNAG00000012822) #37
Lizard	MODERN SPECIES		ENSACAG00000014115	EXT2 (ENSACAG00000014199) #9	ALX4 (ENSACAG00000014352) #10	ENSACAG00000036806	ENSACAG00000014373 #12	ENSACAG00000036339	TSPAN18 (ENSACAG00000014461) #13	TP53I11 (ENSACAG00000014509) #14	PRDM11 (ENSACAG00000014563) #16	SYT13 (ENSACAG00000014581) #17	ENSACAG00000014622	CHST1 (ENSACAG00000014634) #18	ENSACAG00000044872	SLC35C1 (ENSACAG00000014640) #20	CRY2 (ENSACAG00000014653) #21	MAPK8IP1 (ENSACAG00000014739) #22	ENSACAG00000038905	PEX16 (ENSACAG00000014815) #23	LARGE2 (ENSACAG00000014896) #24	PHF21A (ENSACAG00000014978) #25	ENSACAG00000034992	ENSACAG00000038358	LRRC4C (ENSACAG00000000801)	ENSACAG00000041329	ENSACAG00000017340	ENSACAG00000044077	ENSACAG00000043186	ENSACAG00000037113	ENSACAG00000044901	ENSACAG00000036473	ENSACAG00000042381
tuatara	MODERN SPECIES	1197											ENSSPUG00000002022 #16	SYT13 (ENSSPUG00000002034) #17	ENSSPUG00000002149	ENSSPUG00000002168	CRY2 (ENSSPUG00000002225) #21	MAPK8IP1 (ENSSPUG00000002232) #22	PEX16 (ENSSPUG00000002257) #23	LARGE2 (ENSSPUG00000002318) #24	PHF21A (ENSSPUG00000002397) #25	CREB3L1 (ENSSPUG00000003053) #27	DGKZ (ENSSPUG00000003133) #28	MDK (ENSSPUG00000003220) #29	CHRM4 (ENSSPUG00000003226) #30	AMBRA1 (ENSSPUG00000003231) #31	HARBI1 (ENSSPUG00000003237) #32	ATG13 (ENSSPUG00000003280) #33	ARHGAP1 (ENSSPUG00000003553) #34	ZNF408 (ENSSPUG00000003559) #35	ENSSPUG00000003565	CKAP5 (ENSSPUG00000003628) #37	LRP4 (ENSSPUG00000003709)
Anura	ANCESTRAL SPECIES	75											ENSGT00940000161051.b.f.a.a.a.a.b	ENSGT00390000013899.b	ENSGT00940000161262 #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #23	ENSGT00940000158758 #24	ENSGT00940000156124 #25	ENSGT00940000159848 #27	ENSGT00940000156152 #28	ENSGT00390000007640.b #29	ENSGT00940000160394.a #30	ENSGT00390000016223 #31	ENSGT00940000154348.c.b.a #32	ENSGT00390000007055 #33	ENSGT01030000234629.E.b	ENSGT00940000160630 #34	ENSGT00930000151062 #35	ENSGT00940000164059	ENSGT00390000014757 #37
Frog	MODERN SPECIES	4	fadd (ENSXETG00000045881)	ccnd1 (ENSXETG00000045695)	ENSXETG00000044323	ENSXETG00000044016	astl2g (ENSXETG00000000918)	astl2f (ENSXETG00000044182)	nadsyn1 (ENSXETG00000031760)	ENSXETG00000040697	astl2d.1 (ENSXETG00000048123)	tll1 (ENSXETG00000000956)	astl2b (ENSXETG00000025500)	astl2a (ENSXETG00000040205)	chst1 (ENSXETG00000001015) #18	slc35c1 (ENSXETG00000036219) #20	cry2 (ENSXETG00000001023) #21	mapk8ip1 (ENSXETG00000001025) #22	pex16 (ENSXETG00000001027) #23	large2 (ENSXETG00000001028) #24	phf21a (ENSXETG00000001031) #25	creb3l1 (ENSXETG00000031075) #27	dgkz (ENSXETG00000001956) #28	mdk (ENSXETG00000001967) #29	ENSXETG00000044898	chrm4 (ENSXETG00000046229) #30	ENSXETG00000047322	ambra1 (ENSXETG00000001979) #31	harbi1 (ENSXETG00000001981) #32	atg13 (ENSXETG00000001983) #33	ENSXETG00000049017	arhgap1 (ENSXETG00000001985) #34	znf408 (ENSXETG00000034425) #35
Leishan spiny toad	MODERN SPECIES	1	ENSLLEG00000020854	FGF4 (ENSLLEG00000020868)	FGF19 (ENSLLEG00000020932)	ENSLLEG00000020984	CCND1 (ENSLLEG00000021050)	ENSLLEG00000021177	TPCN2 (ENSLLEG00000021215)	NADSYN1 (ENSLLEG00000021615)	ENSLLEG00000021771	ENSLLEG00000021985	ENSLLEG00000022055	ENSLLEG00000022188	CHST1 (ENSLLEG00000022223) #18	SLC35C1 (ENSLLEG00000022256) #20	CRY2 (ENSLLEG00000022391) #21	MAPK8IP1 (ENSLLEG00000022952) #22	PEX16 (ENSLLEG00000023185) #23	LARGE2 (ENSLLEG00000023346) #24	PHF21A (ENSLLEG00000023594) #25	CREB3L1 (ENSLLEG00000023855) #27	DGKZ (ENSLLEG00000024009) #28	CHRM4 (ENSLLEG00000025061) #30	ENSLLEG00000025086	AMBRA1 (ENSLLEG00000025123) #31	ENSLLEG00000025363	HARBI1 (ENSLLEG00000025377) #32	ATG13 (ENSLLEG00000025414) #33	ENSLLEG00000025519	ARHGAP1 (ENSLLEG00000008726) #34	ZNF408 (ENSLLEG00000008856) #35	ENSLLEG00000008894
Coelacanth	MODERN SPECIES	229	si:ch1073-281m9.1 (ENSLACG00000017284)	ENSLACG00000017384	ENSLACG00000017441	EXT2 (ENSLACG00000017456) #9	ALX4 (ENSLACG00000017583) #10	CD82 (ENSLACG00000017907) #12	TSPAN18 (ENSLACG00000018016) #13	TP53I11 (ENSLACG00000018072) #14	ENSLACG00000018164 #16	SYT13 (ENSLACG00000018202) #17	ENSLACG00000018240	ENSLACG00000018262	zgc:101566 (ENSLACG00000018301)	CHST1 (ENSLACG00000018365) #18	CRY2 (ENSLACG00000018488) #21	MAPK8IP1 (ENSLACG00000018506) #22	PEX16 (ENSLACG00000018529) #23	LARGE2 (ENSLACG00000018543) #24	CREB3L1 (ENSLACG00000018569) #27	PHF21A (ENSLACG00000018606) #25	DGKZ (ENSLACG00000018674) #28	MDK (ENSLACG00000018707) #29	CHRM4 (ENSLACG00000018713) #30	AMBRA1 (ENSLACG00000018746) #31	HARBI1 (ENSLACG00000018783) #32	ATG13 (ENSLACG00000018786) #33	ENSLACG00000018794	ARHGAP1 (ENSLACG00000018798) #34	f2 (ENSLACG00000018806)	znf408 (ENSLACG00000018810) #35	ENSLACG00000018813 #37
Actinopterygii	ANCESTRAL SPECIES	12	ENSGT00940000158825	ENSGT00940000161128	ENSGT01090000260003.a.a	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000164361	ENSGT00730000111007.a.b	ENSGT00940000157530.b	ENSGT00390000013899.b	ENSGT00940000161262.a #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000012935	ENSGT00940000158287	ENSGT00390000014757 #37	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00940000164122	ENSGT00940000153903.a.a	ENSGT00940000153201	ENSGT00940000163542
Reedfish	MODERN SPECIES	10	FADD (ENSECRG00000013771)	PPFIA1 (ENSECRG00000013899)	CTTN (ENSECRG00000014308)	shank2b (ENSECRG00000014415)	ENSECRG00000014528	ENSECRG00000014561	ENSECRG00000014642	ENSECRG00000000421	ENSECRG00000000434	chst1 (ENSECRG00000000443) #18	ENSECRG00000000453	ENSECRG00000000465	ENSECRG00000000474	slc35c1 (ENSECRG00000000481) #20	cry2 (ENSECRG00000000495) #21	MAPK8IP1 (ENSECRG00000000522) #22	ENSECRG00000000578	ENSECRG00000000596	cstpp1 (ENSECRG00000000608)	lrp4 (ENSECRG00000000743)	ckap5 (ENSECRG00000001122) #37	slc6a5 (ENSECRG00000001477)	prmt3 (ENSECRG00000001827)	htatip2 (ENSECRG00000001904)	dbx1a (ENSECRG00000001922)	NAV2 (ENSECRG00000002365)	e2f8 (ENSECRG00000003773)	csrp3 (ENSECRG00000003783)	zdhhc13 (ENSECRG00000003789)	ENSECRG00000003828	MPPED2 (ENSECRG00000004102)
Neopterygii	ANCESTRAL SPECIES	4	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000164361	ENSGT00730000111007.a.b	ENSGT00940000157530.b.a	ENSGT01090000260003.a.a	ENSGT00940000157530.b.b	ENSGT00390000013899.b	ENSGT00940000161262.a #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000012935	ENSGT00940000158287	ENSGT00390000014757 #37	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00940000164122	ENSGT00940000163542	ENSGT00390000005430	ENSGT00550000075025
Osteoglossocephalai	ANCESTRAL SPECIES	81	ENSGT00940000157182.g.a	ENSGT01090000260003.a.a	ENSGT00940000157182.g.b	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000164361	ENSGT00730000111007.a.b	ENSGT00940000165480	ENSGT00940000157530.b.b	ENSGT00390000013899.b	ENSGT00940000161262.a #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00940000158287	ENSGT00390000014757 #37	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00940000164122.a.a	ENSGT00940000163542	ENSGT00390000005430	ENSGT00550000075025
Osteoglossiformes	ANCESTRAL SPECIES	68	ENSGT00940000158825.b	ENSGT00940000161128.c.b	ENSGT00940000161128.d	ENSGT00940000157182.g.a	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000164361	ENSGT00730000111007.a.b	ENSGT00940000165480	ENSGT00940000157530.b.b	ENSGT00390000013899.b	ENSGT00940000161262.a #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00940000158287	ENSGT00390000014757 #37	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00940000164122.a.a	ENSGT00390000007681.b.a.a	ENSGT00390000005430	ENSGT00550000075025
P. kingsleyae	MODERN SPECIES	12	AMPD3 (ENSPKIG00000017137)	rnf141 (ENSPKIG00000017208)	fgf19 (ENSPKIG00000017230)	fgf4 (ENSPKIG00000017244)	fgf3 (ENSPKIG00000017262)	ANO1 (ENSPKIG00000017383)	ppfia1 (ENSPKIG00000017713)	CTTN (ENSPKIG00000018059)	shank2b (ENSPKIG00000018184)	acte1 (ENSPKIG00000018472)	ENSPKIG00000018495	zgc:101566 (ENSPKIG00000018546)	chst1 (ENSPKIG00000018563) #18	slc35c1 (ENSPKIG00000018572) #20	cry2 (ENSPKIG00000018597) #21	MAPK8IP1 (ENSPKIG00000018678) #22	lrp4 (ENSPKIG00000018840)	ckap5 (ENSPKIG00000019152) #37	NELL1 (ENSPKIG00000019550)
Asian bonytongue	MODERN SPECIES	2	fgf4 (ENSSFOG00015011876)	FGF3 (ENSSFOG00015005700)	ANO1 (ENSSFOG00015005616)	FADD (ENSSFOG00015032079)	ppfia1 (ENSSFOG00015005328)	CTTN (ENSSFOG00015005291)	shank2b (ENSSFOG00015005229)	acte1 (ENSSFOG00015000126)	ENSSFOG00015000093	guca1g (ENSSFOG00015023060)	ENSSFOG00015023039	zgc:101566 (ENSSFOG00015032927)	chst1 (ENSSFOG00015023025) #18	slc35c1 (ENSSFOG00015023014) #20	cry2 (ENSSFOG00015022994) #21	MAPK8IP1 (ENSSFOG00015022976) #22	lrp4 (ENSSFOG00015022948)	ckap5 (ENSSFOG00015022916) #37	NELL1 (ENSSFOG00015022874)	slc6a5 (ENSSFOG00015022864)	prmt3 (ENSSFOG00015022824)	htatip2 (ENSSFOG00015027816)	dbx1a (ENSSFOG00015022794)	NAV2 (ENSSFOG00015022588)	e2f8 (ENSSFOG00015022531)	csrp3 (ENSSFOG00015022509)	zdhhc13 (ENSSFOG00015022492)	ENSSFOG00015022457	mpped2a (ENSSFOG00015022438)	dnajc24 (ENSSFOG00015022427)	immp1l (ENSSFOG00015022420)
Clupeocephala	ANCESTRAL SPECIES	16	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000164361	ENSGT00730000111007.a.b	ENSGT00940000165480.a	ENSGT00940000165480.b	ENSGT00390000013260.A.a	ENSGT00940000157530.b.a	ENSGT00940000157530.b.b	ENSGT00390000013899.b	ENSGT00940000161262.a #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00940000157089.B #22	ENSGT00940000158287	ENSGT00390000014757 #37	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00550000075025	ENSGT00390000001443	ENSGT00940000155391.a.b.b
Otomorpha	ANCESTRAL SPECIES	6	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000164361	ENSGT00730000111007.a.b	ENSGT00940000165480.a	ENSGT00940000165480.b	ENSGT00390000013260.A.a	ENSGT00940000157530.b.a	ENSGT00940000157530.b.b	ENSGT00390000013315 #20	ENSGT00390000013899.b	ENSGT00940000161262.a #18	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00940000157089.B #22	ENSGT00940000158287	ENSGT00390000014757 #37	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00550000075025	ENSGT00390000001443	ENSGT00940000155391.a.b.b
Otophysi	ANCESTRAL SPECIES	72																ENSGT00940000157089.B #22	ENSGT00940000158287	ENSGT00390000014757 #37	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000155663.f.a	ENSGT00950000183093.B.b	ENSGT00550000075025
Characiphysae	ANCESTRAL SPECIES	131	ENSGT00940000160694.g.b	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a.e	ENSGT00940000158136	ENSGT00390000005535	ENSGT00940000164949	ENSGT00950000182838.A.a.b	ENSGT00940000156076.a.a.a.a.c	ENSGT00940000163235.A.a.b	ENSGT01040000240607	ENSGT00940000156076.a.a.a.a.d.b	ENSGT00940000163235.A.a.a.b	ENSGT00390000013104	ENSGT00390000013315 #20	ENSGT00940000157089.B #22	ENSGT00940000158287	ENSGT00390000014757 #37	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00550000075025	ENSGT00390000001443	ENSGT00940000155391.a.b.b
Characiphysae_b	ANCESTRAL SPECIES	4	ENSGT00940000160694.g.b	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a.e	ENSGT00940000158136	ENSGT00390000005535	ENSGT00940000164949	ENSGT00950000182838.A.a.b	ENSGT00940000156076.a.a.a.a.c	ENSGT00940000163235.A.a.b	ENSGT01040000240607	ENSGT00940000156076.a.a.a.a.d.b	ENSGT00940000163235.A.a.a.b	ENSGT00390000013104	ENSGT00390000013315 #20	ENSGT00940000157089.B #22	ENSGT00940000158287
Characoidei	ANCESTRAL SPECIES	331									ENSGT00940000156076.a.a.a.a.c	ENSGT00940000163235.A.a.b	ENSGT01040000240607	ENSGT00940000156076.a.a.a.a.d.b	ENSGT00940000163235.A.a.a.b	ENSGT00390000013104	ENSGT00390000013315 #20	ENSGT00940000157089.B #22	ENSGT00940000158287
Red-bellied piranha	MODERN SPECIES	451										ENSPNAG00000026579	ENSPNAG00000026602	ENSPNAG00000026867	ENSPNAG00000007154	tollip (ENSPNAG00000005677)	slc35c1 (ENSPNAG00000026948) #20	MAPK8IP1 (ENSPNAG00000005764) #22	lrp4 (ENSPNAG00000004179)	ENSPNAG00000027415 #37
Mexicana tetra	MODERN SPECIES	20	polr2l (ENSAMXG00000037735)	CPSF7 (ENSAMXG00000003296)	sdhaf2 (ENSAMXG00000042602)	syt7b (ENSAMXG00000003329)	ENSAMXG00000042767	ENSAMXG00000033663	rplp2l (ENSAMXG00000033872)	ENSAMXG00000039930	ENSAMXG00000040339	ENSAMXG00000041219	ENSAMXG00000034021	ENSAMXG00000037407	ENSAMXG00000038098	tollip (ENSAMXG00000031530)	slc35c1 (ENSAMXG00000035377) #20	MAPK8IP1 (ENSAMXG00000018486) #22	ENSAMXG00000029139	nxph2b (ENSAMXG00000039710)	spoplb (ENSAMXG00000031842)	ENSAMXG00000029854	ENSAMXG00000043558	ENSAMXG00000014144	MINAR1 (ENSAMXG00000014109)	mthfs (ENSAMXG00000039756)	zfand6 (ENSAMXG00000037308)	fah (ENSAMXG00000020041)	ENSAMXG00000034421	arnt2 (ENSAMXG00000019978)	ABHD17C (ENSAMXG00000036243)	CEMIP (ENSAMXG00000019906)	mesd (ENSAMXG00000019872)
Electric eel	MODERN SPECIES	475	calb2b (ENSEEEG00000003881)	ENSEEEG00000003887	slc38a7 (ENSEEEG00000003891)	mrpl21 (ENSEEEG00000003906)	ENSEEEG00000003908	AP2A2 (ENSEEEG00000003911)	ENSEEEG00000003924	ENSEEEG00000003926	ENSEEEG00000003927	ENSEEEG00000003928	ENSEEEG00000003929	ENSEEEG00000003930	ENSEEEG00000003931	tollip (ENSEEEG00000003932)	slc35c1 (ENSEEEG00000003933) #20	MAPK8IP1 (ENSEEEG00000003934) #22	ENSEEEG00000003942
Channel catfish	MODERN SPECIES	1	ENSIPUG00000017616	helz2c (ENSIPUG00000017627)	cmtr2 (ENSIPUG00000017648)	calb2 (ENSIPUG00000017673)	slc38a7 (ENSIPUG00000017796)	MRPL21 (ENSIPUG00000017862)	ENSIPUG00000017892	ap2a2 (ENSIPUG00000017908)	ENSIPUG00000018000	ENSIPUG00000018032	ENSIPUG00000018228	ENSIPUG00000018239	ENSIPUG00000018257	tollip (ENSIPUG00000018263)	slc35c1 (ENSIPUG00000018276) #20	MAPK8IP1 (ENSIPUG00000018285) #22	lrp4 (ENSIPUG00000018338)	ckap5 (ENSIPUG00000018496) #37	nell1 (ENSIPUG00000018603)	slc6a5 (ENSIPUG00000018671)	prmt3 (ENSIPUG00000018719)	htatip2 (ENSIPUG00000018753)	dbx1a (ENSIPUG00000018790)	NAV2 (ENSIPUG00000018827)	e2f8 (ENSIPUG00000018886)	immp1l (ENSIPUG00000018906)	elp4 (ENSIPUG00000018991)	anx2a (ENSIPUG00000019052)	gtf2a2 (ENSIPUG00000019123)	ENSIPUG00000019131	ENSIPUG00000019137
Cyprinoidei	ANCESTRAL SPECIES	41	ENSGT01030000234592.A.a.a.a.a	ENSGT00940000160527.b	ENSGT01040000240385.A.a.b.b	ENSGT00940000167415	ENSGT01030000234754	ENSGT00940000156397.a.b	ENSGT00940000166741	ENSGT00940000163520.A.a.a.b.q	ENSGT01030000234532.B.e.a.a.a.b	ENSGT00390000015386.b	ENSGT00940000159778.a	ENSGT00940000154658.a	ENSGT00940000155527.j.a	ENSGT00940000155586.B	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000157089.B #22	ENSGT00390000005535	ENSGT00910000144226	ENSGT00940000165179.b	ENSGT00940000157468.a.a.a	ENSGT00940000156076.a.a.a.a.c	ENSGT00940000156076.b	ENSGT00940000156076.a.a.a.a.d.b	ENSGT00940000177923	ENSGT00940000163235.A.a.b	ENSGT00940000162219.x	ENSGT00390000013104	ENSGT00390000013315 #20	ENSGT00940000160483.k.b	ENSGT00940000160644	ENSGT00390000004147
Cyprininae	ANCESTRAL SPECIES	290	ENSGT00940000160527.b.a	ENSGT01040000240385.A.a.b.b	ENSGT00940000167415	ENSGT01030000234754.a.b	ENSGT00940000156397.a.b.c	ENSGT00940000166741.d	ENSGT01030000234532.B.e.a.a.a.b.a.a	ENSGT00390000015386.b.c.a	ENSGT00940000159778.a.b	ENSGT00940000154658.a	ENSGT00940000155527.j.a	ENSGT00940000155586.B.e.a	ENSGT00940000156348.B.n	ENSGT00940000155586.B.f	ENSGT00950000182898.a.a.a.a.a.g.e	ENSGT00940000157089.B #22	ENSGT00390000005535	ENSGT00910000144226	ENSGT00940000165179.b.a.b	ENSGT00940000157468.a.a.a.e	ENSGT00940000156076.a.a.a.a.c	ENSGT00940000156076.b	ENSGT00940000156076.a.a.a.a.d.b	ENSGT00940000177923	ENSGT01040000240558.a	ENSGT00940000164871.b.e.b.a	ENSGT00940000163235.E	ENSGT00940000162219.x	ENSGT00390000013104	ENSGT00390000013315.a.a #20	ENSGT00940000160483.k.b.d
Goldfish	MODERN SPECIES	25	ENSCARG00000005944	znf219 (ENSCARG00000005924)	ENSCARG00000005877	ENSCARG00000005848	ENSCARG00000005842	ENSCARG00000005833	ENSCARG00000005828	ENSCARG00000036359	ENSCARG00000036325	DOK7 (ENSCARG00000036310)	ENSCARG00000036201	ENSCARG00000036171	ADGRL3 (ENSCARG00000034602)	MPDZ (ENSCARG00000029634)	ENSCARG00000029360	MAPK8IP1 (ENSCARG00000029315) #22	HECTD4 (ENSCARG00000028420)	ENSCARG00000028369	RPH3A (ENSCARG00000028220)	ENSCARG00000028141	tollip (ENSCARG00000028096)	slc35c1 (ENSCARG00000028088) #20	RASGRP2 (ENSCARG00000027971)	SIPA1 (ENSCARG00000027900)	ENSCARG00000027850	ywhae2 (ENSCARG00000027749)	psmd9 (ENSCARG00000027725)	lrp4 (ENSCARG00000026352)	cacnb2a (ENSCARG00000022899)	ENSCARG00000022801	SMCHD1 (ENSCARG00000022493)
Cyprininae_a	ANCESTRAL SPECIES	141	ENSGT01030000234754.b	ENSGT00940000156397.a.b.d	ENSGT00940000166741.c	ENSGT00940000156397.a.b.c	ENSGT00940000166741.d	ENSGT01030000234532.B.e.a.a.a.b.a.a	ENSGT00390000015386.b.c.a	ENSGT00940000159778.a.b	ENSGT00940000154658.a	ENSGT00940000155527.j.a	ENSGT00940000155586.B.e.a	ENSGT00940000156348.B.n	ENSGT00940000155586.B.f	ENSGT00950000182898.a.a.a.a.a.g.f	ENSGT00950000182898.a.a.a.a.a.g.e	ENSGT00940000157089.B #22	ENSGT00390000005535	ENSGT00910000144226	ENSGT00940000165179.b.a.a	ENSGT00940000157468.a.a.a.f	ENSGT00390000013104.d.b	ENSGT00390000013315.a.a #20	ENSGT00940000160483.k.b.d	ENSGT00940000160644.d	ENSGT01030000234532.A.a.a.a.a.a.a.b	ENSGT01090000260061.c.b.ud.c.b	ENSGT00390000004147.g	ENSGT00940000158287.b	ENSGT00950000182837.a.b.a.o.a	ENSGT00940000155370	ENSGT00940000155458.f
Common carp reference	DUPLICATION
Common carp reference	MODERN SPECIES	6	ENSCCRG00000061270	ENSCCRG00000070796	ENSCCRG00000065302	ENSCCRG00000078771	ENSCCRG00000053835	ENSCCRG00000070480	ENSCCRG00000070638	ENSCCRG00000054764	ENSCCRG00000077346	ENSCCRG00000043081	ENSCCRG00000043098	ENSCCRG00000045044	ENSCCRG00000071847	ENSCCRG00000066362	ENSCCRG00000080579	ENSCCRG00000080446 #22	ENSCCRG00000001161	ENSCCRG00000061890	ENSCCRG00000041593	ENSCCRG00000077788	tollip (ENSCCRG00000066323)	slc35c1 (ENSCCRG00000066984) #20	ENSCCRG00000069042	ENSCCRG00000057719	ENSCCRG00000061648	ywhae2 (ENSCCRG00000065575)	psmd9 (ENSCCRG00000081299)	lrp4 (ENSCCRG00000015632)	cacnb2a (ENSCCRG00000011606)	myl12.1 (ENSCCRG00000067896)	MYOM1 (ENSCCRG00000044950)
Common carp reference	MODERN SPECIES		ENSCCRG00000006041	ENSCCRG00000067756	ENSCCRG00000000161	ENSCCRG00000058836	ENSCCRG00000080695	ENSCCRG00000052846	ENSCCRG00000026577	ENSCCRG00000027851	ENSCCRG00000060855	ENSCCRG00000082189	ENSCCRG00000056466	ENSCCRG00000075826	ENSCCRG00000080023	ENSCCRG00000081606	ENSCCRG00000063445	ENSCCRG00000061685 #22	mrpl21 (ENSCCRG00000000488)	ENSCCRG00000073285	ENSCCRG00000074248	ENSCCRG00000082617	ENSCCRG00000071859	ENSCCRG00000056257	tollip (ENSCCRG00000020513)	slc35c1 (ENSCCRG00000067739) #20	ENSCCRG00000075515	ENSCCRG00000040406	ENSCCRG00000003971	ywhae2 (ENSCCRG00000061887)	psmd9 (ENSCCRG00000003936)	lrp4 (ENSCCRG00000016152)	cacnb2a (ENSCCRG00000054723)
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	389													ENSSGRG00000032468	ENSSGRG00000032477	ENSSGRG00000032489	MAPK8IP1 (ENSSGRG00000032571) #22	ENSSGRG00000032592	ENSSGRG00000032596	ENSSGRG00000032598	ENSSGRG00000032601	ENSSGRG00000032604	ENSSGRG00000032607	ENSSGRG00000032611	tollip (ENSSGRG00000032618)	TOLLIP (ENSSGRG00000032653)	ENSSGRG00000032654	slc35c1 (ENSSGRG00000032655) #20	RASGRP2 (ENSSGRG00000032656)	ENSSGRG00000032658	ENSSGRG00000032659	ywhae2 (ENSSGRG00000032713)
Golden-line barbel	MODERN SPECIES	1047												ENSSGRG00000055305	ENSSGRG00000055306	ENSSGRG00000055308	ENSSGRG00000055309	MAPK8IP1 (ENSSGRG00000055310) #22	mrpl21 (ENSSGRG00000055311)	ENSSGRG00000055312
Zebrafish	MODERN SPECIES	22	ENSDARG00000068065	ENSDARG00000051804	ENSDARG00000090371	btr12 (ENSDARG00000051809)	ENSDARG00000101446	znf219 (ENSDARG00000079738)	ENSDARG00000078979	cbln8 (ENSDARG00000019294)	cbln6 (ENSDARG00000035718)	ENSDARG00000088625	SLC24A2 (ENSDARG00000063158)	ENSDARG00000105782	ENSDARG00000105714	ADGRL3 (ENSDARG00000090624)	ENSDARG00000099078	MAPK8IP1 (ENSDARG00000090326) #22	mrpl21 (ENSDARG00000003846)	HECTD4 (ENSDARG00000101079)	ENSDARG00000098989	ENSDARG00000105490	ENSDARG00000109688	ENSDARG00000104914	ENSDARG00000099470	tollip (ENSDARG00000098486)	slc35c1 (ENSDARG00000104669) #20	ENSDARG00000102247	RASGRP2 (ENSDARG00000099092)	SIPA1 (ENSDARG00000076697)	ENSDARG00000041086	ywhae2 (ENSDARG00000017014)	psmd9 (ENSDARG00000006300)
Clupeiformes	ANCESTRAL SPECIES	160	ENSGT00940000163723.A.e	ENSGT00940000163723.A.f.b	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000164361.a	ENSGT00730000111007.a.b	ENSGT00940000165480.a	ENSGT00940000165480.b	ENSGT00390000013260.A.a	ENSGT00940000157530.b.a	ENSGT00940000157530.b.b	ENSGT00940000161262.a #18	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00940000158287	ENSGT00390000014757 #37	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825
Atlantic herring	MODERN SPECIES	22	ppfia1 (ENSCHAG00000013547)	ENSCHAG00000013262	CTTN (ENSCHAG00000011070)	ENSCHAG00000010585	ENSCHAG00000010556	ENSCHAG00000010370	ENSCHAG00000010352	ENSCHAG00000010344	ENSCHAG00000010328	ENSCHAG00000010323	ENSCHAG00000010161	CHST1 (ENSCHAG00000010152) #18	slc35c1 (ENSCHAG00000010142) #20	ENSCHAG00000010117	CRY2 (ENSCHAG00000009492) #21	MAPK8IP1 (ENSCHAG00000009457) #22	ENSCHAG00000009275 #37	lrp4 (ENSCHAG00000006035)	NELL1 (ENSCHAG00000001429)	slc6a5 (ENSCHAG00000000393)	prmt3 (ENSCHAG00000000254)	ENSCHAG00000000213	ENSCHAG00000026438	DOK4 (ENSCHAG00000026432)	ccdc102a (ENSCHAG00000026421)	adgrg1 (ENSCHAG00000026407)	ENSCHAG00000026396	slc7a6 (ENSCHAG00000026332)	slc7a6os (ENSCHAG00000026322)	scube2 (ENSCHAG00000025898)	tmem9b (ENSCHAG00000025845)
Denticle herring	MODERN SPECIES	7	ENSDCDG00000035386	arfgap2 (ENSDCDG00000035382)	ENSDCDG00000035380	pex16 (ENSDCDG00000035379) #23	ENSDCDG00000035378	large2 (ENSDCDG00000035347) #24	ENSDCDG00000035236	KIFC3 (ENSDCDG00000035185)	ENSDCDG00000035177	guca1g (ENSDCDG00000035172)	ENSDCDG00000035170	ENSDCDG00000035168	chst1 (ENSDCDG00000035167) #18	slc35c1 (ENSDCDG00000035166) #20	CRY2 (ENSDCDG00000035147) #21	MAPK8IP1 (ENSDCDG00000035135) #22	lrp4 (ENSDCDG00000034874)	ENSDCDG00000034835 #37	NELL1 (ENSDCDG00000034058)	slc6a5 (ENSDCDG00000033969)	prmt3 (ENSDCDG00000033958)	AP2A2 (ENSDCDG00000033915)	cd151l (ENSDCDG00000033905)	taldo1 (ENSDCDG00000033894)	tspan4a (ENSDCDG00000033890)	ddb1 (ENSDCDG00000033883)	luzp2 (ENSDCDG00000033877)	TMEM138 (ENSDCDG00000033874)	DAGLA (ENSDCDG00000033867)	ENSDCDG00000033856	CPSF7 (ENSDCDG00000033850)
Euteleosteomorpha	ANCESTRAL SPECIES	211				ENSGT00940000154996.a.b.b	ENSGT00940000164990.d	ENSGT00940000161001	ENSGT00940000162677	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##36	ENSGT00940000157089.B #22	ENSGT00940000158287	ENSGT00390000014757 #37	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000180696	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a
Acanthomorphata	ANCESTRAL SPECIES	28	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b	ENSGT00940000165530.b	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201	ENSGT00940000153903.a.b.a	ENSGT00940000155653.b	ENSGT00390000001545	ENSGT01040000244721	ENSGT00950000182839.B.b.b	ENSGT00950000183205.b.a.a	ENSGT00940000160931	ENSGT00940000165300	ENSGT00940000160574	ENSGT00940000157089.B #22	ENSGT00940000158287	ENSGT00390000014757 #37	ENSGT00950000183093.B.a.a	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000180696	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f
Euacanthomorphacea	ANCESTRAL SPECIES	44																ENSGT00940000157089.B #22	ENSGT00940000158287	ENSGT00940000154963	ENSGT00940000180696	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d	ENSGT00940000156926.d	ENSGT00940000160333
Percomorphaceae	ANCESTRAL SPECIES	15	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##36	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000157530.b.a	ENSGT00940000157089.B #22	ENSGT00940000158287	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000180696	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d	ENSGT00940000156926.d
Tiger tail seahorse	MODERN SPECIES	256	ITFG1 (ENSHCOG00000005891)	NETO2 (ENSHCOG00000005833)	DNAJA2 (ENSHCOG00000005804)	lrp3 (ENSHCOG00000005789)	slc7a10a (ENSHCOG00000005750)	rhpn2 (ENSHCOG00000005720)	cep89 (ENSHCOG00000005696)	zgc:165481 (ENSHCOG00000005669)	ABCC12 (ENSHCOG00000005660)	ENSHCOG00000005605	ENSHCOG00000005584	ENSHCOG00000005540	ENSHCOG00000005529	SLCO3A1 (ENSHCOG00000005517)	ENSHCOG00000000704	MAPK8IP1 (ENSHCOG00000005476) #22	lrp4 (ENSHCOG00000005440)	NELL1 (ENSHCOG00000005389)	slc6a5 (ENSHCOG00000005358)	prmt3 (ENSHCOG00000005337)	htatip2 (ENSHCOG00000005326)	dbx1a (ENSHCOG00000005312)	NAV2 (ENSHCOG00000005236)	slc10a2 (ENSHCOG00000005174)	e2f8 (ENSHCOG00000005132)	csrp3 (ENSHCOG00000005117)	zdhhc13 (ENSHCOG00000005101)	mpped2a (ENSHCOG00000005088)	ENSHCOG00000005065	ENSHCOG00000000830	NR2E3 (ENSHCOG00000000127)
Percomorphaceae_B	ANCESTRAL SPECIES	12	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00530000068132	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##36	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000157530.b.a	ENSGT00960000187709	ENSGT00940000163916	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000180696	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000181004	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a
Ovalentaria	ANCESTRAL SPECIES	17	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00530000068132	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##36	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000157530.b.a	ENSGT00940000163916	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00940000154963	ENSGT00940000180696	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000181004	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f
Ovalentaria_B	ANCESTRAL SPECIES	10	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##36	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000157530.b.a	ENSGT00940000163916	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000180696	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000181004	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a
Cichlidae	ANCESTRAL SPECIES	11	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##36	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000163916	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d
Pseudocrenilabrinae	ANCESTRAL SPECIES	13	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##36	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000163916	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f.n	ENSGT00950000182858.C.f.m.b	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	13	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##36	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000163916	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f.m.a	ENSGT00950000182858.C.f.m.b	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT01100000267088	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a
Haplochromini	ANCESTRAL SPECIES	11	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##36	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000163916	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f.n	ENSGT00950000182858.C.f.m.b	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT01100000267088	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a
Burton s mouthbrooder	MODERN SPECIES	1221														ENSHBUG00000001189	ENSHBUG00000011266	MAPK8IP1 (ENSHBUG00000011291) #22	ENSHBUG00000011305
Haplochromini_A	ANCESTRAL SPECIES	10	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##36	ENSGT00390000013315 #20	ENSGT00940000179349	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000163916	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f.n	ENSGT00950000182858.C.f.m.b	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT01100000267088	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a
Haplochromini_B	ANCESTRAL SPECIES	3	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##36	ENSGT00390000013315 #20	ENSGT00940000179349	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000163916	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f.n	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d	ENSGT00940000156926.d
Eastern happy	MODERN SPECIES		ENSACLG00000011193	hsd17b12b (ENSACLG00000011156)	ENSACLG00000011151	LRRC4C (ENSACLG00000011030)	apip (ENSACLG00000011019)	slc1a2a (ENSACLG00000010975)	PAMR1 (ENSACLG00000010941) ##36	slc35c1 (ENSACLG00000010925) #20	ENSACLG00000010898	ENSACLG00000010871	chst1 (ENSACLG00000010864) #18	ENSACLG00000010847	ENSACLG00000010839	ENSACLG00000010836	ENSACLG00000010824	MAPK8IP1 (ENSACLG00000010772) #22	ENSACLG00000010664	vstm2b (ENSACLG00000010655)	ENSACLG00000010647	vps35 (ENSACLG00000010584)	zgc:92818 (ENSACLG00000010563)	ANO9 (ENSACLG00000010520)	ENSACLG00000010506	shcbp1 (ENSACLG00000010482)	ENSACLG00000010474	spg21 (ENSACLG00000010436)	pdcd7 (ENSACLG00000010263)	KBTBD13 (ENSACLG00000010261)	UBAP1L (ENSACLG00000010255)	ENSACLG00000010254	rasl12 (ENSACLG00000010244)
Zebra mbuna	MODERN SPECIES	1091	trpm5 (ENSMZEG00005014025)	traf6 (ENSMZEG00005014045)	ttc17 (ENSMZEG00005014070)	hsd17b12b (ENSMZEG00005014110)	ENSMZEG00005014126	LRRC4C (ENSMZEG00005014136)	apip (ENSMZEG00005014143)	slc1a2a (ENSMZEG00005014155)	PAMR1 (ENSMZEG00005014173) ##36	slc35c1 (ENSMZEG00005014185) #20	ENSMZEG00005014191	chst1 (ENSMZEG00005014195) #18	ENSMZEG00005014203	ENSMZEG00005014211	ENSMZEG00005014220	MAPK8IP1 (ENSMZEG00005014229) #22	ENSMZEG00005014251	ENSMZEG00005014257	ENSMZEG00005014270	lrp4 (ENSMZEG00005014311)	NELL1 (ENSMZEG00005014408)	ENSMZEG00005014419	slc6a5 (ENSMZEG00005014432)	prmt3 (ENSMZEG00005014447)	htatip2 (ENSMZEG00005014464)	dbx1a (ENSMZEG00005014483)	NAV2 (ENSMZEG00005014529)	e2f8 (ENSMZEG00005014622)	csrp3 (ENSMZEG00005014652)	zdhhc13 (ENSMZEG00005014665)	mpped2a (ENSMZEG00005014683)
P. nyererei	MODERN SPECIES	654												ENSPNYG00000024263	chst1 (ENSPNYG00000024262) #18	ENSPNYG00000024261	ENSPNYG00000024260	MAPK8IP1 (ENSPNYG00000024259) #22
Lyretail cichlid	MODERN SPECIES	320	ENSNBRG00000019035	trpm5 (ENSNBRG00000018973)	traf6 (ENSNBRG00000018939)	ttc17 (ENSNBRG00000018886)	hsd17b12b (ENSNBRG00000018801)	ENSNBRG00000018783	LRRC4C (ENSNBRG00000018764)	apip (ENSNBRG00000018631)	slc1a2a (ENSNBRG00000018584)	PAMR1 (ENSNBRG00000018544) ##36	slc35c1 (ENSNBRG00000018530) #20	ENSNBRG00000018522	chst1 (ENSNBRG00000018513) #18	ENSNBRG00000018473	ENSNBRG00000018456	MAPK8IP1 (ENSNBRG00000018420) #22	ENSNBRG00000018403	lrp4 (ENSNBRG00000018321)	ENSNBRG00000018265	NELL1 (ENSNBRG00000018215)	slc6a5 (ENSNBRG00000018128)	prmt3 (ENSNBRG00000018024)	htatip2 (ENSNBRG00000017997)	dbx1a (ENSNBRG00000017981)	NAV2 (ENSNBRG00000017891)	e2f8 (ENSNBRG00000017843)	ENSNBRG00000017816	csrp3 (ENSNBRG00000017790)	zdhhc13 (ENSNBRG00000017600)	mpped2a (ENSNBRG00000017550)	ENSNBRG00000017535
Nile tilapia	MODERN SPECIES		lingo1b (ENSONIG00000005857)	kcnq1.1 (ENSONIG00000005859)	ENSONIG00000034462	trpm5 (ENSONIG00000005867)	traf6 (ENSONIG00000040460)	ttc17 (ENSONIG00000005886)	ENSONIG00000036270	LRRC4C (ENSONIG00000020451)	apip (ENSONIG00000005908)	hsd17b12b (ENSONIG00000042636)	slc1a2a (ENSONIG00000005912)	ENSONIG00000005915 ##36	chst1 (ENSONIG00000020452) #18	ENSONIG00000005920	ENSONIG00000034018	MAPK8IP1 (ENSONIG00000036840) #22	ENSONIG00000042626	A3GALT2 (ENSONIG00000027795)	ENSONIG00000041355	celf1 (ENSONIG00000008300)	OTOG (ENSONIG00000007889)	myod2 (ENSONIG00000007897)	TNNT3 (ENSONIG00000007898)	ENSONIG00000032798	ENSONIG00000030513	ENSONIG00000041528	ENSONIG00000029025	ENSONIG00000040953	ENSONIG00000038942	fgf4 (ENSONIG00000018093)	fgf3 (ENSONIG00000018091)
Midas cichlid	MODERN SPECIES	1094	ENSACIG00000021007	trpm5 (ENSACIG00000021027)	traf6 (ENSACIG00000021157)	ttc17 (ENSACIG00000021176)	hsd17b12b (ENSACIG00000021230)	ENSACIG00000021246	ENSACIG00000021259	LRRC4C (ENSACIG00000021271)	apip (ENSACIG00000021283)	slc1a2a (ENSACIG00000021292)	PAMR1 (ENSACIG00000021308) ##36	slc35c1 (ENSACIG00000021337) #20	chst1 (ENSACIG00000021348) #18	ENSACIG00000021353	ENSACIG00000021451	MAPK8IP1 (ENSACIG00000021491) #22	ENSACIG00000021523	ENSACIG00000021540
Pomacentridae	ANCESTRAL SPECIES	15	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##36	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b.b	ENSGT00940000157530.b.a	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000180696	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000181004	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a.p
Pomacentridae_A	ANCESTRAL SPECIES	66	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##36	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b.b	ENSGT00940000157530.b.a	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00940000154963	ENSGT00940000180696	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000181004	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a.p	ENSGT00390000007681.b.a.a.o
Amphiprion	ANCESTRAL SPECIES	42	ENSGT00390000013180	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##36	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b.b	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000177592.b.a.a	ENSGT00940000163467.a.b.b.a.b	ENSGT00940000154963	ENSGT00940000180696	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000181004	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00940000177702.a.a
Clown anemonefish	MODERN SPECIES	1453														chst1 (ENSAOCG00000003077) #18	ENSAOCG00000003074	MAPK8IP1 (ENSAOCG00000003073) #22	A3GALT2 (ENSAOCG00000003069)	lrp4 (ENSAOCG00000000070)	ENSAOCG00000003022
Orange clownfish	MODERN SPECIES		trpm5 (ENSAPEG00000000110)	ENSAPEG00000000111	traf6 (ENSAPEG00000000112)	ttc17 (ENSAPEG00000000113)	hsd17b12b (ENSAPEG00000000115)	ENSAPEG00000000116	LRRC4C (ENSAPEG00000000117)	apip (ENSAPEG00000000118)	slc1a2a (ENSAPEG00000000119)	ENSAPEG00000000120 ##36	slc35c1 (ENSAPEG00000000121) #20	chst1 (ENSAPEG00000000122) #18	ENSAPEG00000000123	ENSAPEG00000000124	ENSAPEG00000000125	MAPK8IP1 (ENSAPEG00000000126) #22	A3GALT2 (ENSAPEG00000000127)	lrp4 (ENSAPEG00000000128)	ENSAPEG00000000131	NELL1 (ENSAPEG00000000132)	ENSAPEG00000000133	ENSAPEG00000000134	ENSAPEG00000000135	ENSAPEG00000000136	ENSAPEG00000000137	slc6a5 (ENSAPEG00000000138)	prmt3 (ENSAPEG00000000139)	htatip2 (ENSAPEG00000000140)	dbx1a (ENSAPEG00000000141)	NAV2 (ENSAPEG00000000142)	ENSAPEG00000000143
Spiny chromis	MODERN SPECIES	1702														ENSAPOG00000023463	ENSAPOG00000023429	MAPK8IP1 (ENSAPOG00000023261) #22	A3GALT2 (ENSAPOG00000023221)
Bicolor damselfish	MODERN SPECIES	1640														ENSSPAG00000020064	ENSSPAG00000019762	MAPK8IP1 (ENSSPAG00000019652) #22
Atherinomorphae	ANCESTRAL SPECIES	8	ENSGT00940000154996.a.b.b	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00530000068132	ENSGT00940000155379.g.a	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d	ENSGT00940000156926.d
Oryzias	ANCESTRAL SPECIES	13	ENSGT00860000135092	ENSGT00390000013180	ENSGT00940000154996.a.b.b	ENSGT00940000164990.d	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a.d	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000153246.a.a.a.d
Oryzias_b	ANCESTRAL SPECIES	5	ENSGT00860000135092	ENSGT00390000013180	ENSGT00940000154996.a.b.b	ENSGT00940000164990.d	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a.d	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f.g	ENSGT00950000182858.C.f.h	ENSGT00940000158287	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a
Javanese ricefish	MODERN SPECIES	17	trpm5 (ENSOJAG00000000332)	traf6 (ENSOJAG00000000283)	ttc17 (ENSOJAG00000000240)	ENSOJAG00000000172	hsd17b12b (ENSOJAG00000000159)	ENSOJAG00000000128	LRRC4C (ENSOJAG00000000089)	ENSOJAG00000000068	apip (ENSOJAG00000016902)	ENSOJAG00000015820	slc35c1 (ENSOJAG00000015726) #20	ENSOJAG00000015714	ENSOJAG00000015688	chst1 (ENSOJAG00000015677) #18	ENSOJAG00000015665	MAPK8IP1 (ENSOJAG00000015651) #22	ENSOJAG00000015638	ENSOJAG00000015513	ENSOJAG00000015497	ENSOJAG00000015490	lrp4 (ENSOJAG00000014843)	ENSOJAG00000014828	NELL1 (ENSOJAG00000012002)	slc6a5 (ENSOJAG00000011557)	prmt3 (ENSOJAG00000011109)	htatip2 (ENSOJAG00000011049)	dbx1a (ENSOJAG00000011041)	ENSOJAG00000009101	csrp3 (ENSOJAG00000009082)	zdhhc13 (ENSOJAG00000008970)	mpped2a (ENSOJAG00000008895)
Indian medaka	MODERN SPECIES	26	ttc17 (ENSOMEG00000004476)	hsd17b12b (ENSOMEG00000004391)	ENSOMEG00000000101	LRRC4C (ENSOMEG00000004334)	apip (ENSOMEG00000004323)	slc1a2a (ENSOMEG00000004288)	slc35c1 (ENSOMEG00000004263) #20	chst1 (ENSOMEG00000004247) #18	CACNG4 (ENSOMEG00000004240)	FNDC5 (ENSOMEG00000004225)	olig4 (ENSOMEG00000004214)	bsdc1 (ENSOMEG00000004206)	marcksl1a (ENSOMEG00000004195)	gjb9a (ENSOMEG00000004186)	ENSOMEG00000004172	MAPK8IP1 (ENSOMEG00000004148) #22	ENSOMEG00000004105	ENSOMEG00000004083	lrp4 (ENSOMEG00000003967)	NELL1 (ENSOMEG00000003767)	slc6a5 (ENSOMEG00000003689)	prmt3 (ENSOMEG00000003641)	htatip2 (ENSOMEG00000003594)	ENSOMEG00000003567	dbx1a (ENSOMEG00000003559)	NAV2 (ENSOMEG00000003514)	e2f8 (ENSOMEG00000003361)	ENSOMEG00000003350	rpl12 (ENSOMEG00000003330)	pole3 (ENSOMEG00000003317)	cd82a (ENSOMEG00000003303) #12
Oryzias_a	ANCESTRAL SPECIES	6	ENSGT00860000135092	ENSGT00390000013180	ENSGT00940000154996.a.b.b	ENSGT00940000164990.d	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a.c	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f.i.b	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000153246.a.a.a.d
Japanese Medaka HdrR	MODERN SPECIES	17	hsd17b12b (ENSORLG00000001004)	ENSORLG00000026513	ENSORLG00000029427	LRRC4C (ENSORLG00000000988)	ENSORLG00000030542	apip (ENSORLG00000000982)	ENSORLG00000030529	slc1a2a (ENSORLG00000000964)	slc35c1 (ENSORLG00000024413) #20	chst1 (ENSORLG00000000946) #18	ENSORLG00000000925	ENSORLG00000000893	ENSORLG00000029669	ENSORLG00000023015	ENSORLG00000028272	MAPK8IP1 (ENSORLG00000000916) #22	ENSORLG00000026038	ENSORLG00000023544	ENSORLG00000022596	ENSORLG00000025652	NELL1 (ENSORLG00000022140)	slc6a5 (ENSORLG00000000875)	ENSORLG00000030475	prmt3 (ENSORLG00000000829)	htatip2 (ENSORLG00000027238)	dbx1a (ENSORLG00000024440)	NAV2 (ENSORLG00000000800)	ENSORLG00000028070	e2f8 (ENSORLG00000000786)	csrp3 (ENSORLG00000000776)	ENSORLG00000023620
Chinese medaka	MODERN SPECIES	715															ENSOSIG00000014640	MAPK8IP1 (ENSOSIG00000014641) #22	ENSOSIG00000014645	ENSOSIG00000014653
Cyprinodontiformes	ANCESTRAL SPECIES	9	ENSGT00940000154996.a.b.b	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00530000068132	ENSGT00940000155379.g.a	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d	ENSGT00940000156926.d
Aplocheiloidei	ANCESTRAL SPECIES	39	ENSGT00390000013180	ENSGT00940000154996.a.b.b	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d	ENSGT00940000156926.d
Mangrove rivulus	MODERN SPECIES	28	ENSKMAG00000002993	ENSKMAG00000003018	kcnq1.1 (ENSKMAG00000003034)	ENSKMAG00000003094	trpm5 (ENSKMAG00000003109)	traf6 (ENSKMAG00000003166)	ttc17 (ENSKMAG00000003201)	hsd17b12b (ENSKMAG00000003337)	ENSKMAG00000003407	LRRC4C (ENSKMAG00000003421)	apip (ENSKMAG00000003435)	slc1a2a (ENSKMAG00000003466)	slc35c1 (ENSKMAG00000003507) #20	chst1 (ENSKMAG00000003525) #18	ENSKMAG00000003542	MAPK8IP1 (ENSKMAG00000003560) #22	ENSKMAG00000003582	lrp4 (ENSKMAG00000003642)	cyb5r4 (ENSKMAG00000003821)	ENSKMAG00000003833	sim1a (ENSKMAG00000003860)	ASCC3 (ENSKMAG00000003953)	ENSKMAG00000004094
Turquoise killifish	MODERN SPECIES	1616	kcnq1.1 (ENSNFUG00015009769)	ENSNFUG00015009716	apip (ENSNFUG00015009611)	slc1a2a (ENSNFUG00015008803)	SLC35C1 (ENSNFUG00015008744) #20	ENSNFUG00015008742	CHST1 (ENSNFUG00015008741) #18	ENSNFUG00015008739	ENSNFUG00015008734	ENSNFUG00015008733	Nfu_g_1_003199 (ENSNFUG00015008728)	nkx2.5 (ENSNFUG00015008727)	BNIP1A (ENSNFUG00015008720)	ATPV0E1 (ENSNFUG00015008714)	RPL26 (ENSNFUG00015008711)	MAPK8IP1 (ENSNFUG00015008703) #22	ENSNFUG00015008697	ENSNFUG00015008695	ENSNFUG00015008690	CABZ01083440.1 (ENSNFUG00015007483)	ENSNFUG00015007340	ENSNFUG00015007337	ENSNFUG00015007333	ENSNFUG00015007332	ENSNFUG00015007327	NELL1 (ENSNFUG00015006562)	ENSNFUG00015006470	slc6a5 (ENSNFUG00015006314)	PRMT3 (ENSNFUG00015006258)	HTATIP2 (ENSNFUG00015006232)	OLA.2304 (ENSNFUG00015006227)
Cyprinodontoidei	ANCESTRAL SPECIES	6	ENSGT00940000154996.a.b.b	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00530000068132	ENSGT00940000155379.g.a	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d
NAME_4	ANCESTRAL SPECIES	66	ENSGT00390000013180	ENSGT00940000154996.a.b.b	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A.ac.b	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d
Mummichog	MODERN SPECIES	2279														chst1 (ENSFHEG00000020880) #18	ENSFHEG00000020899	MAPK8IP1 (ENSFHEG00000020948) #22	ENSFHEG00000021031	lrp4 (ENSFHEG00000021307)	ENSFHEG00000021337	NELL1 (ENSFHEG00000021393)	slc6a5 (ENSFHEG00000021451)	prmt3 (ENSFHEG00000021475)	htatip2 (ENSFHEG00000021519)	dbx1a (ENSFHEG00000021545)	NAV2 (ENSFHEG00000022260)	csrp3 (ENSFHEG00000022329)	zdhhc13 (ENSFHEG00000022440)	mpped2a (ENSFHEG00000022477)	ENSFHEG00000022514	ENSFHEG00000022562	NR2E3 (ENSFHEG00000022629)
Sheepshead minnow	MODERN SPECIES	571								hsd17b12b (ENSCVAG00000004355)	ENSCVAG00000004335	LRRC4C (ENSCVAG00000004328)	apip (ENSCVAG00000004317)	slc1a2a (ENSCVAG00000004291)	slc35c1 (ENSCVAG00000004269) #20	chst1 (ENSCVAG00000004261) #18	ENSCVAG00000004252	MAPK8IP1 (ENSCVAG00000004240) #22	ENSCVAG00000004203
Poeciliinae	ANCESTRAL SPECIES	13	ENSGT00940000154996.a.b.b	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00530000068132	ENSGT00940000155379.g.a	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d
Poecilia	ANCESTRAL SPECIES	4	ENSGT00940000154996.a.b.b	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00530000068132	ENSGT00940000155379.g.a	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.a.a.b.b.b.a.a	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f
NAME_6	ANCESTRAL SPECIES	307			ENSGT00940000164990.d.c	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00530000068132	ENSGT00940000155379.g.a	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f
Amazon molly	MODERN SPECIES	372	ENSPFOG00000012469	chga (ENSPFOG00000012501)	ccn2a (ENSPFOG00000012551)	STX7 (ENSPFOG00000012608)	leg1.1 (ENSPFOG00000012656)	dpf3 (ENSPFOG00000012692)	wdr21 (ENSPFOG00000012756)	ZFYVE1 (ENSPFOG00000012865)	pigh (ENSPFOG00000012921)	rhov (ENSPFOG00000012938)	vps18 (ENSPFOG00000012960)	ino80 (ENSPFOG00000013082)	chac1 (ENSPFOG00000013506)	dll4 (ENSPFOG00000013522)	ENSPFOG00000022554	MAPK8IP1 (ENSPFOG00000013613) #22	ENSPFOG00000013690
Sailfin molly	MODERN SPECIES	558														chst1 (ENSPLAG00000004802) #18	ENSPLAG00000004798	MAPK8IP1 (ENSPLAG00000004781) #22	ENSPLAG00000004760
Guppy	MODERN SPECIES	455															ENSPREG00000020315	MAPK8IP1 (ENSPREG00000020263) #22	ENSPREG00000020229	lrp4 (ENSPREG00000020107)	ENSPREG00000020051	NELL1 (ENSPREG00000019953)	slc6a5 (ENSPREG00000019890)	prmt3 (ENSPREG00000019857)	htatip2 (ENSPREG00000019845)	dbx1a (ENSPREG00000019836)	ENSPREG00000019829	NAV2 (ENSPREG00000019505)	e2f8 (ENSPREG00000019385)	csrp3 (ENSPREG00000019363)	zdhhc13 (ENSPREG00000019340)	mpped2a (ENSPREG00000019313)	ENSPREG00000019289
Platyfish	MODERN SPECIES	18	luzp2 (ENSXMAG00000025139)	lingo1b (ENSXMAG00000011734)	kcnq1.1 (ENSXMAG00000011736)	ENSXMAG00000022786	trpm5 (ENSXMAG00000011779)	traf6 (ENSXMAG00000011827)	ttc17 (ENSXMAG00000011837)	hsd17b12b (ENSXMAG00000011880)	ENSXMAG00000023283	LRRC4C (ENSXMAG00000019680)	apip (ENSXMAG00000001487)	slc1a2a (ENSXMAG00000001471)	slc35c1 (ENSXMAG00000001466) #20	chst1 (ENSXMAG00000020315) #18	ENSXMAG00000001456	MAPK8IP1 (ENSXMAG00000027053) #22	lrp4 (ENSXMAG00000001380)	ENSXMAG00000023927	NELL1 (ENSXMAG00000001374)	slc6a5 (ENSXMAG00000010152)	prmt3 (ENSXMAG00000010154)	htatip2 (ENSXMAG00000010179)	dbx1a (ENSXMAG00000010186)	NAV2 (ENSXMAG00000010189)	ENSXMAG00000024557	e2f8 (ENSXMAG00000010237)	csrp3 (ENSXMAG00000027973)	zdhhc13 (ENSXMAG00000010253)	mpped2a (ENSXMAG00000010273)	ENSXMAG00000019869	ENSXMAG00000010292
Percomorphaceae_C	ANCESTRAL SPECIES	11	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00530000068132	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##36	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000157530.b.a	ENSGT00960000187709	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000181004	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d
Eupercaria	ANCESTRAL SPECIES	14	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00530000068132	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##36	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000157530.b.a	ENSGT00960000187709	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d
Tetraodontidae	ANCESTRAL SPECIES	4	ENSGT00940000154996.a.b.b	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##36	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d
Fugu	MODERN SPECIES	4	lingo1b (ENSTRUG00000016358)	kcnq1.1 (ENSTRUG00000016351)	ENSTRUG00000022458	trpm5 (ENSTRUG00000016316)	traf6 (ENSTRUG00000016306)	ttc17 (ENSTRUG00000016281)	hsd17b12b (ENSTRUG00000016257)	ENSTRUG00000032668	LRRC4C (ENSTRUG00000016255)	apip (ENSTRUG00000016253)	slc1a2a (ENSTRUG00000016239)	ENSTRUG00000016200 ##36	slc35c1 (ENSTRUG00000022396) #20	chst1 (ENSTRUG00000016194) #18	ENSTRUG00000016184	MAPK8IP1 (ENSTRUG00000021709) #22	ENSTRUG00000016170	ENSTRUG00000020682	NELL1 (ENSTRUG00000016017)	slc6a5 (ENSTRUG00000015944)	prmt3 (ENSTRUG00000015904)	htatip2 (ENSTRUG00000015893)	dbx1a (ENSTRUG00000015886)	NAV2 (ENSTRUG00000027383)	e2f8 (ENSTRUG00000015792)	csrp3 (ENSTRUG00000015766)	zdhhc13 (ENSTRUG00000015707)	mpped2a (ENSTRUG00000015686)	ENSTRUG00000020949	ENSTRUG00000015637	NR2E3 (ENSTRUG00000015582)
Tetraodon	MODERN SPECIES	20	bbox1 (ENSTNIG00000009592)	fibinb (ENSTNIG00000009593)	lingo1b (ENSTNIG00000009594)	kcnq1.1 (ENSTNIG00000009595)	trpm5 (ENSTNIG00000009596)	traf6 (ENSTNIG00000009597)	ttc17 (ENSTNIG00000009598)	hsd17b12b (ENSTNIG00000009599)	LRRC4C (ENSTNIG00000009600)	apip (ENSTNIG00000009601)	slc1a2a (ENSTNIG00000009602)	ENSTNIG00000009603 ##36	slc35c1 (ENSTNIG00000009604) #20	chst1 (ENSTNIG00000009605) #18	ENSTNIG00000009606	MAPK8IP1 (ENSTNIG00000009607) #22	ENSTNIG00000000788	lrp4 (ENSTNIG00000009608)	NELL1 (ENSTNIG00000009609)	slc6a5 (ENSTNIG00000009610)	prmt3 (ENSTNIG00000009611)	htatip2 (ENSTNIG00000009612)	dbx1a (ENSTNIG00000009613)	NAV2 (ENSTNIG00000009614)	e2f8 (ENSTNIG00000009615)	csrp3 (ENSTNIG00000009616)	zdhhc13 (ENSTNIG00000002121)	mpped2a (ENSTNIG00000005247)	ENSTNIG00000005152	ENSTNIG00000005151	NR2E3 (ENSTNIG00000005150)
Eupecaria_A	ANCESTRAL SPECIES	15	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00530000068132	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##36	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000157530.b.a	ENSGT00960000187709	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d
Ballan wrasse	MODERN SPECIES	286								apip (ENSLBEG00000019459)	slc1a2a (ENSLBEG00000019487)	PAMR1 (ENSLBEG00000019518) ##36	slc35c1 (ENSLBEG00000019538) #20	chst1 (ENSLBEG00000019555) #18	ENSLBEG00000019565	ENSLBEG00000019598	ENSLBEG00000019689	MAPK8IP1 (ENSLBEG00000019704) #22
Eupecaria_B	ANCESTRAL SPECIES	15	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00530000068132	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##36	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000157530.b.a	ENSGT00960000187709	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d
Eupecaria_C	ANCESTRAL SPECIES	11	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##36	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000157530.b.a	ENSGT00960000187709	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00810000125439.A	ENSGT00940000163467.a.b.b.a.b	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	7	ENSGT00940000164990.d	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##36	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000157530.b.a	ENSGT00960000187709	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d
European seabass	MODERN SPECIES	18	trpm5 (ENSDLAG00005022970)	ENSDLAG00005023002	ttc17 (ENSDLAG00005023010)	hsd17b12b (ENSDLAG00005023065)	ENSDLAG00005023114	ENSDLAG00005031274	ENSDLAG00005028663	apip (ENSDLAG00005023121)	slc1a2a (ENSDLAG00005023133)	ENSDLAG00005023170 ##36	ENSDLAG00005033046 #20	ENSDLAG00005027746 #18	ENSDLAG00005031403	ENSDLAG00005023185	ENSDLAG00005023230	ENSDLAG00005026530 #22	ENSDLAG00005031681	ENSDLAG00005030258	ENSDLAG00005012296	NELL1 (ENSDLAG00005009953)	ENSDLAG00005012301	slc6a5 (ENSDLAG00005012316)	prmt3 (ENSDLAG00005012846)	htatip2 (ENSDLAG00005012965)	dbx1a (ENSDLAG00005012977)	NAV2 (ENSDLAG00005013065)	e2f8 (ENSDLAG00005015998)	csrp3 (ENSDLAG00005032855)	zdhhc13 (ENSDLAG00005016050)	mpped2a (ENSDLAG00005017487)	ENSDLAG00005026438
Large yellow croaker	MODERN SPECIES	480	kcnq1.1 (ENSLCRG00005014622)	ENSLCRG00005014626	trpm5 (ENSLCRG00005014627)	traf6 (ENSLCRG00005014629)	ttc17 (ENSLCRG00005014684)	hsd17b12b (ENSLCRG00005014694)	ENSLCRG00005014704	LRRC4C (ENSLCRG00005014705)	APIP (ENSLCRG00005014706)	slc1a2a (ENSLCRG00005014732)	ENSLCRG00005014870 ##36	slc35c1 (ENSLCRG00005014871) #20	chst1 (ENSLCRG00005014872) #18	ENSLCRG00005014873	ENSLCRG00005014874	MAPK8IP1 (ENSLCRG00005014875) #22	A3GALT2 (ENSLCRG00005014876)	lrp4 (ENSLCRG00005014902)	NELL1 (ENSLCRG00005016259)	ENSLCRG00005016530	slc6a5 (ENSLCRG00005016535)	prmt3 (ENSLCRG00005016606)	TNNT3 (ENSLCRG00005016828)	ENSLCRG00005016834	ENSLCRG00005016836	ENSLCRG00005000205	foxr1 (ENSLCRG00005000261)	atp6v0d1 (ENSLCRG00005000233)	ENSLCRG00005000277	ENSLCRG00005000286	c1qtnf4 (ENSLCRG00005000291)
Gilthead seabream	MODERN SPECIES	18	ENSSAUG00010023855	trpm5 (ENSSAUG00010023856)	traf6 (ENSSAUG00010023857)	ttc17 (ENSSAUG00010023858)	hsd17b12b (ENSSAUG00010023900)	ENSSAUG00010023901	LRRC4C (ENSSAUG00010023903)	apip (ENSSAUG00010023905)	slc1a2a (ENSSAUG00010023921)	PAMR1 (ENSSAUG00010023923) ##36	slc35c1 (ENSSAUG00010023924) #20	chst1 (ENSSAUG00010023926) #18	ENSSAUG00010023927	ENSSAUG00010023928	ENSSAUG00010023929	MAPK8IP1 (ENSSAUG00010023930) #22	ENSSAUG00010004148	lrp4 (ENSSAUG00010004401)	NELL1 (ENSSAUG00010008045)	ENSSAUG00010010809	ENSSAUG00010010810	slc6a5 (ENSSAUG00010010819)	prmt3 (ENSSAUG00010011691)	htatip2 (ENSSAUG00010011716)	dbx1a (ENSSAUG00010011720)	NAV2 (ENSSAUG00010011732)	e2f8 (ENSSAUG00010011743)	csrp3 (ENSSAUG00010011751)	zdhhc13 (ENSSAUG00010011756)	mpped2a (ENSSAUG00010011765)	ENSSAUG00010011775
Perciformes	ANCESTRAL SPECIES	15	ENSGT00940000154996.a.b.b	ENSGT00940000164990.d	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00530000068132	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##36	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d
Perciformes_a	ANCESTRAL SPECIES	13	ENSGT00390000013180	ENSGT00940000154996.a.b.b	ENSGT00940000164990.d	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##36	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d
Channel bull blenny	MODERN SPECIES	17	ENSCGOG00000002213	trpm5 (ENSCGOG00000002202)	traf6 (ENSCGOG00000002157)	ttc17 (ENSCGOG00000001962)	ENSCGOG00000001946	hsd17b12b (ENSCGOG00000001890)	ENSCGOG00000001886	LRRC4C (ENSCGOG00000001884)	apip (ENSCGOG00000001852)	slc1a2a (ENSCGOG00000001849)	ENSCGOG00000001839 ##36	slc35c1 (ENSCGOG00000001834) #20	chst1 (ENSCGOG00000001830) #18	ENSCGOG00000001815	ENSCGOG00000001811	MAPK8IP1 (ENSCGOG00000001798) #22	ENSCGOG00000001792	lrp4 (ENSCGOG00000001539)	ENSCGOG00000001528	NELL1 (ENSCGOG00000001335)	ENSCGOG00000001259	slc6a5 (ENSCGOG00000001258)	prmt3 (ENSCGOG00000001228)	htatip2 (ENSCGOG00000001220)	dbx1a (ENSCGOG00000001219)	ENSCGOG00000001218	NAV2 (ENSCGOG00000001167)	e2f8 (ENSCGOG00000001160)	csrp3 (ENSCGOG00000001159)	zdhhc13 (ENSCGOG00000001121)	mpped2a (ENSCGOG00000001116)
Pike perch	MODERN SPECIES	100																MAPK8IP1 (ENSSLUG00000025830) #22	ENSSLUG00000025828	SNAP25 (ENSSLUG00000025825)	LRRC28 (ENSSLUG00000025824)	igf1rb (ENSSLUG00000025493)	ap3s2 (ENSSLUG00000025346)	ANPEP (ENSSLUG00000025307)	ANPEP (ENSSLUG00000025113)	mespaa (ENSSLUG00000025043)	mespba (ENSSLUG00000025038)	sv2ba (ENSSLUG00000025032)	ENSSLUG00000025016	NTRK3 (ENSSLUG00000024999)	mrpl46 (ENSSLUG00000024994)	mrps11 (ENSSLUG00000024992)	PDPR (ENSSLUG00000024972)
Cottioidei	ANCESTRAL SPECIES	13	ENSGT00940000154996.a.b.b	ENSGT00940000164990.d	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00530000068132	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##36	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d	ENSGT00940000156926.d
Lumpfish	MODERN SPECIES	18	luzp2 (ENSCLMG00005000698)	lingo1b (ENSCLMG00005000695)	kcnq1.1 (ENSCLMG00005000690)	ENSCLMG00005000686	trpm5 (ENSCLMG00005000684)	traf6 (ENSCLMG00005000677)	ttc17 (ENSCLMG00005000667)	hsd17b12b (ENSCLMG00005000666)	ENSCLMG00005000663	LRRC4C (ENSCLMG00005000661)	apip (ENSCLMG00005000659)	slc1a2a (ENSCLMG00005000655)	PAMR1 (ENSCLMG00005000650) ##36	slc35c1 (ENSCLMG00005000644) #20	ENSCLMG00005000620	MAPK8IP1 (ENSCLMG00005000568) #22	A3GALT2 (ENSCLMG00005000561)	lrp4 (ENSCLMG00005000551)	ENSCLMG00005000542	NELL1 (ENSCLMG00005000055)	slc6a5 (ENSCLMG00005022683)	prmt3 (ENSCLMG00005022681)	htatip2 (ENSCLMG00005022680)	dbx1a (ENSCLMG00005022679)	NAV2 (ENSCLMG00005022639)	e2f8 (ENSCLMG00005022617)	csrp3 (ENSCLMG00005022611)	zdhhc13 (ENSCLMG00005022516)	mpped2a (ENSCLMG00005022511)	ENSCLMG00005022510	ENSCLMG00005022507
Stickleback	MODERN SPECIES	1	ENSGACG00000017159	luzp2 (ENSGACG00000017158)	lingo1b (ENSGACG00000017157)	kcnq1.1 (ENSGACG00000017155)	trpm5 (ENSGACG00000017149)	traf6 (ENSGACG00000017142)	ttc17 (ENSGACG00000017137)	hsd17b12b (ENSGACG00000017131)	LRRC4C (ENSGACG00000017129)	apip (ENSGACG00000017125)	ENSGACG00000017123	slc1a2a (ENSGACG00000017121)	slc35c1 (ENSGACG00000017116) #20	chst1 (ENSGACG00000017115) #18	ENSGACG00000017112	MAPK8IP1 (ENSGACG00000017110) #22	A3GALT2 (ENSGACG00000017105)	lrp4 (ENSGACG00000017100)	NELL1 (ENSGACG00000017098)	slc6a5 (ENSGACG00000017096)	prmt3 (ENSGACG00000017094)	htatip2 (ENSGACG00000017092)	NAV2 (ENSGACG00000017087)	e2f8 (ENSGACG00000017086)	csrp3 (ENSGACG00000017082)	zdhhc13 (ENSGACG00000017075)	mpped2a (ENSGACG00000017073)	ENSGACG00000017072	ENSGACG00000017063	NR2E3 (ENSGACG00000017060)	slc22a18 (ENSGACG00000017056)
Percomorphaceae_D	ANCESTRAL SPECIES	11	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##36	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000157530.b.a	ENSGT00960000187709	ENSGT00940000163916	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000181004	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f
Carangaria	ANCESTRAL SPECIES	11	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##36	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000157530.b.a	ENSGT00960000187709	ENSGT00940000163916	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d
Pleuronectoidei	ANCESTRAL SPECIES	39	ENSGT00940000154996.a.b.b	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##36	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000157530.b.a	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d
Tongue sole	MODERN SPECIES	15	trpm5 (ENSCSEG00000003046)	ENSCSEG00000003033	kcnq1.1 (ENSCSEG00000003017)	lingo1b (ENSCSEG00000003013)	luzp2 (ENSCSEG00000003000)	ENSCSEG00000002996	fibinb (ENSCSEG00000002993)	bbox1 (ENSCSEG00000002986)	LRRC4C (ENSCSEG00000002984)	apip (ENSCSEG00000002980)	slc1a2a (ENSCSEG00000002968)	slc35c1 (ENSCSEG00000002963) #20	KLHL10 (ENSCSEG00000002543)	chst1 (ENSCSEG00000002539) #18	ENSCSEG00000002538	MAPK8IP1 (ENSCSEG00000002524) #22	ENSCSEG00000002517	A3GALT2 (ENSCSEG00000002498)	ENSCSEG00000002493	ENSCSEG00000002491	ENSCSEG00000002488	ENSCSEG00000002484	lrp4 (ENSCSEG00000002418)	GAS2 (ENSCSEG00000002394)	slc17a6b (ENSCSEG00000002260)	ano5b (ENSCSEG00000002239)	IGDCC3 (ENSCSEG00000002201)	ENSCSEG00000002192	cilp (ENSCSEG00000002181)	eif3jb (ENSCSEG00000002171)	ENSCSEG00000002157
Turbot	MODERN SPECIES	17	ENSSMAG00000009190	ENSSMAG00000024216	kcnq1.1 (ENSSMAG00000009139)	ENSSMAG00000009130	trpm5 (ENSSMAG00000008987)	TRAF6 (ENSSMAG00000008957)	ttc17 (ENSSMAG00000008833)	hsd17b12b (ENSSMAG00000008774)	apip (ENSSMAG00000008751)	slc1a2a (ENSSMAG00000008734)	ENSSMAG00000008725 ##36	ENSSMAG00000029408 #20	ENSSMAG00000008702 #18	ENSSMAG00000008698	ENSSMAG00000008677	ENSSMAG00000008616 #22	ENSSMAG00000008605	ENSSMAG00000008497	ENSSMAG00000008480	NELL1 (ENSSMAG00000008339)	slc6a5 (ENSSMAG00000008312)	prmt3 (ENSSMAG00000008265)	ENSSMAG00000008258	htatip2 (ENSSMAG00000008235)	dbx1a (ENSSMAG00000023716)	NAV2 (ENSSMAG00000008150)	e2f8 (ENSSMAG00000008106)	csrp3 (ENSSMAG00000008056)	zdhhc13 (ENSSMAG00000008013)	mpped2a (ENSSMAG00000033645)	ENSSMAG00000007996
Carangaria_A	ANCESTRAL SPECIES	19	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##36	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000157530.b.a	ENSGT00960000187709	ENSGT00940000163916	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d
Barramundi perch	MODERN SPECIES	96	ENSLCAG00010018606	trpm5 (ENSLCAG00010018591)	traf6 (ENSLCAG00010018578)	ttc17 (ENSLCAG00010018377)	hsd17b12b (ENSLCAG00010018345)	ENSLCAG00010018339	LRRC4C (ENSLCAG00010018337)	apip (ENSLCAG00010018323)	slc1a2a (ENSLCAG00010018316)	ENSLCAG00010018310 ##36	slc35c1 (ENSLCAG00010018307) #20	chst1 (ENSLCAG00010018305) #18	ENSLCAG00010018302	ENSLCAG00010018301	ENSLCAG00010018298	MAPK8IP1 (ENSLCAG00010018292) #22	ENSLCAG00010018289	lrp4 (ENSLCAG00010018047)	ENSLCAG00010017973	NELL1 (ENSLCAG00010017942)	slc6a5 (ENSLCAG00010017918)	prmt3 (ENSLCAG00010017909)	htatip2 (ENSLCAG00010017906)	dbx1a (ENSLCAG00010017904)	ENSLCAG00010017900	NAV2 (ENSLCAG00010017798)	e2f8 (ENSLCAG00010017767)	csrp3 (ENSLCAG00010017763)	zdhhc13 (ENSLCAG00010017744)	mpped2a (ENSLCAG00010017716)	ENSLCAG00010017710
Seriola	ANCESTRAL SPECIES	30	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##36	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00940000157530.b.a	ENSGT00960000187709	ENSGT00940000163916	ENSGT00940000157089.B #22	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d	ENSGT00940000156926.d	ENSGT00940000160333
Yellowtail amberjack	MODERN SPECIES	2699								apip (ENSSLDG00000003944)	slc1a2a (ENSSLDG00000003966)	PAMR1 (ENSSLDG00000004029) ##36	slc35c1 (ENSSLDG00000004092) #20	chst1 (ENSSLDG00000004108) #18	ENSSLDG00000004126	ENSSLDG00000004141	ENSSLDG00000004158	MAPK8IP1 (ENSSLDG00000004194) #22
Greater amberjack	MODERN SPECIES	3	kcnq1.1 (ENSSDUG00000015239)	ENSSDUG00000015273	trpm5 (ENSSDUG00000015291)	traf6 (ENSSDUG00000015351)	ttc17 (ENSSDUG00000015381)	hsd17b12b (ENSSDUG00000015488)	LRRC4C (ENSSDUG00000015521)	apip (ENSSDUG00000015532)	slc1a2a (ENSSDUG00000015573)	ENSSDUG00000015599 ##36	slc35c1 (ENSSDUG00000015611) #20	chst1 (ENSSDUG00000015618) #18	ENSSDUG00000015619	ENSSDUG00000015638	ENSSDUG00000015701	MAPK8IP1 (ENSSDUG00000015714) #22	lrp4 (ENSSDUG00000015763)	NELL1 (ENSSDUG00000015920)	ENSSDUG00000015986	ENSSDUG00000015990	slc6a5 (ENSSDUG00000016016)	prmt3 (ENSSDUG00000016148)	htatip2 (ENSSDUG00000016210)	dbx1a (ENSSDUG00000016225)	NAV2 (ENSSDUG00000016252)	e2f8 (ENSSDUG00000016327)	csrp3 (ENSSDUG00000016350)	zdhhc13 (ENSSDUG00000016374)	mpped2a (ENSSDUG00000016439)	ENSSDUG00000016457	ENSSDUG00000016485
Anabantaria	ANCESTRAL SPECIES	11	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##36	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00960000187709	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000181004	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f
Zig-zag eel	MODERN SPECIES	17	ENSMAMG00000014980	kcnq1.1 (ENSMAMG00000015000)	ENSMAMG00000015050	trpm5 (ENSMAMG00000015080)	ENSMAMG00000027515	ttc17 (ENSMAMG00000015309)	hsd17b12b (ENSMAMG00000015426)	ENSMAMG00000025683	ENSMAMG00000015494	apip (ENSMAMG00000015506)	slc1a2a (ENSMAMG00000015526)	ENSMAMG00000015550 ##36	ENSMAMG00000025042 #20	ENSMAMG00000015586 #18	ENSMAMG00000015588	ENSMAMG00000015594 #22	ENSMAMG00000015633	ENSMAMG00000015657	ENSMAMG00000015820	NELL1 (ENSMAMG00000015789)	slc6a5 (ENSMAMG00000015848)	prmt3 (ENSMAMG00000015896)	htatip2 (ENSMAMG00000015926)	dbx1a (ENSMAMG00000015940)	ENSMAMG00000016183	NAV2 (ENSMAMG00000015959)	e2f8 (ENSMAMG00000016200)	csrp3 (ENSMAMG00000016232)	zdhhc13 (ENSMAMG00000016250)	mpped2a (ENSMAMG00000016266)	ENSMAMG00000026458
Anabantoidei	ANCESTRAL SPECIES	8	ENSGT00390000013180	ENSGT00940000154996.a.b.b	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00390000013315 #20	ENSGT00940000161262.a #18	ENSGT00940000157530.b.b	ENSGT00960000187709	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d
Climbing perch	MODERN SPECIES	16	ENSATEG00000021061	ENSATEG00000021085	trpm5 (ENSATEG00000021113)	ENSATEG00000021148	ttc17 (ENSATEG00000021172)	ENSATEG00000027497	hsd17b12b (ENSATEG00000021238)	LRRC4C (ENSATEG00000021299)	APIP (ENSATEG00000027665)	slc1a2a (ENSATEG00000021313)	ENSATEG00000029077	ENSATEG00000030098 #20	ENSATEG00000021360 #18	ENSATEG00000021366	ENSATEG00000028460	ENSATEG00000021394 #22	ENSATEG00000021428	ENSATEG00000021458	NELL1 (ENSATEG00000021543)	ENSATEG00000021560	slc6a5 (ENSATEG00000021586)	prmt3 (ENSATEG00000021598)	htatip2 (ENSATEG00000021609)	dbx1a (ENSATEG00000021616)	NAV2 (ENSATEG00000021634)	csrp3 (ENSATEG00000021724)	zdhhc13 (ENSATEG00000021742)	mpped2a (ENSATEG00000021765)	ENSATEG00000021774	ENSATEG00000021798	ENSATEG00000021837
Siamese fighting fish	MODERN SPECIES	14	fibinb (ENSBSLG00000011752)	ENSBSLG00000011712	luzp2 (ENSBSLG00000011625)	lingo1b (ENSBSLG00000011592)	KCNQ1 (ENSBSLG00000010746)	ENSBSLG00000010478	trpm5 (ENSBSLG00000010445)	traf6 (ENSBSLG00000010440)	ttc17 (ENSBSLG00000010086)	hsd17b12b (ENSBSLG00000009741)	LRRC4C (ENSBSLG00000009547)	apip (ENSBSLG00000009527)	slc1a2a (ENSBSLG00000009104)	slc35c1 (ENSBSLG00000009076) #20	ENSBSLG00000009050	ENSBSLG00000008955 #22	A3GALT2 (ENSBSLG00000008699)	ENSBSLG00000008692	lrp4 (ENSBSLG00000007912)	FRMD5 (ENSBSLG00000006671)	wdr76 (ENSBSLG00000005796)	RASGRF1 (ENSBSLG00000005365)	si:ch211-107o10.3 (ENSBSLG00000005247)	idh2 (ENSBSLG00000004876)	ZNF710 (ENSBSLG00000004830)	ENSBSLG00000004779	HERC1 (ENSBSLG00000004100)	ENSBSLG00000004079	ENSBSLG00000004076	ENSBSLG00000004066	ENSBSLG00000004060
Pinecone sodierfish	MODERN SPECIES	17	cep89 (ENSMMDG00005013375)	rhpn2 (ENSMMDG00005012374)	slc7a10a (ENSMMDG00005012358)	lrp3 (ENSMMDG00005012355)	zgc:92818 (ENSMMDG00005012354)	mylk3 (ENSMMDG00005012352)	orc6 (ENSMMDG00005012351)	vps35 (ENSMMDG00005012005)	hrh3 (ENSMMDG00005011947)	shcbp1 (ENSMMDG00005011760)	uqcrfs1 (ENSMMDG00005011753)	vstm2b (ENSMMDG00005011752)	ccnd1 (ENSMMDG00005011749)	lto1 (ENSMMDG00005011746)	ENSMMDG00005011744	MAPK8IP1 (ENSMMDG00005011743) #22	lrp4 (ENSMMDG00005011593)	ENSMMDG00005000755 #37	NELL1 (ENSMMDG00005000287)	slc6a5 (ENSMMDG00005000196)	prmt3 (ENSMMDG00005000132)	htatip2 (ENSMMDG00005000108)	dbx1a (ENSMMDG00005000101)	ENSMMDG00005023868	NAV2 (ENSMMDG00005023843)	e2f8 (ENSMMDG00005023830)	csrp3 (ENSMMDG00005023826)	zdhhc13 (ENSMMDG00005023737)	mpped2a (ENSMMDG00005023721)	ENSMMDG00005023717	ENSMMDG00005023712
Cod	MODERN SPECIES	5	ENSGMOG00000032949	ENSGMOG00000008186	ENSGMOG00000008180	ENSGMOG00000008174	ENSGMOG00000012781	ENSGMOG00000012785	ENSGMOG00000026070	large2 (ENSGMOG00000014703) #24	ENSGMOG00000000810	ENSGMOG00000001070	ENSGMOG00000001091	ENSGMOG00000025653	rassf7b (ENSGMOG00000023443)	ENSGMOG00000017425	ascl1b (ENSGMOG00000027313)	ENSGMOG00000017397 #22	ENSGMOG00000009383	ENSGMOG00000009277 #37	NELL1 (ENSGMOG00000031363)	slc6a5 (ENSGMOG00000002626)	prmt3 (ENSGMOG00000002570)	htatip2 (ENSGMOG00000002550)	dbx1a (ENSGMOG00000002488)	ENSGMOG00000028982	e2f8 (ENSGMOG00000019253)	csrp3 (ENSGMOG00000019248)	zdhhc13 (ENSGMOG00000019229)	mpped2a (ENSGMOG00000027425)	ENSGMOG00000032770	ENSGMOG00000019198	ENSGMOG00000019194
Protacanthopterygii	ANCESTRAL SPECIES																	ENSGT00940000157089.B #22
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	1900																ENSGT00940000157089.B.i #22	ENSGT00940000158287.h
Salmoninae_a	ANCESTRAL SPECIES	149	ENSGT00940000158298.f	ENSGT00390000014679.d.a	ENSGT00940000159201.i	ENSGT00390000016567.m.a	ENSGT00940000157801	ENSGT00940000157697	ENSGT00940000164048	ENSGT00940000156775.e	ENSGT00530000063669.b.b	ENSGT00940000159420	ENSGT00390000006845	ENSGT00390000016054.a	ENSGT00940000155095.i.a.d	ENSGT00950000183028.a.a.b	ENSGT00940000154317.a.b.a.c	ENSGT00940000157089.B.i #22	ENSGT00940000158287.h
Salmo	DUPLICATION
Salmo	ANCESTRAL SPECIES	27	ENSGT00940000158298.f	ENSGT00390000014679.d.a	ENSGT00940000159201.i	ENSGT00390000016567.m.a	ENSGT00940000157801	ENSGT00940000157697	ENSGT00940000164048	ENSGT00940000156775.e	ENSGT00530000063669.b.b	ENSGT00940000159420	ENSGT00390000006845	ENSGT00390000016054.a	ENSGT00940000155095.i.a.d	ENSGT00950000183028.a.a.b	ENSGT00940000154317.a.b.a.c	ENSGT00940000157089.B.i.a #22	ENSGT00940000158287.h	ENSGT00810000125439.A.l	ENSGT00940000154963.g.a.b	ENSGT00940000156825.j	ENSGT00940000164669.f	ENSGT00940000164526.a	ENSGT00940000158565.q	ENSGT00940000153561.b.a.a.b.y.b.a	ENSGT00950000182839.B.b.a.d	ENSGT00940000157462.C.c.a.j	ENSGT00940000161238.l.d	ENSGT00940000158758.i #24	ENSGT00940000154824.h.a	ENSGT00940000154022.a.a.k	ENSGT00940000157918.o.b
River trout	MODERN SPECIES	3	btbd9 (ENSSTUG00000005574)	zfand3 (ENSSTUG00000005665)	MDGA1 (ENSSTUG00000005707)	mocs1 (ENSSTUG00000006093)	DAAM2 (ENSSTUG00000006254)	kif6 (ENSSTUG00000006580)	kcnk5a (ENSSTUG00000006603)	fam184aa (ENSSTUG00000006610)	SYT14 (ENSSTUG00000006638)	gnmt (ENSSTUG00000006648)	manea (ENSSTUG00000006656)	fut9a (ENSSTUG00000006663)	fhl5 (ENSSTUG00000006667)	ENSSTUG00000006686	col10a1a (ENSSTUG00000006692)	MAPK8IP1 (ENSSTUG00000006698) #22	lrp4 (ENSSTUG00000006733)	ENSSTUG00000007403	NELL1 (ENSSTUG00000007502)	slc6a5 (ENSSTUG00000010531)	prmt3 (ENSSTUG00000012651)	slc39a1 (ENSSTUG00000012687)	ENSSTUG00000012701	CTTN (ENSSTUG00000012739)	ENSSTUG00000013013	rassf7b (ENSSTUG00000013048)	BRSK2 (ENSSTUG00000013107)	ENSSTUG00000013328	ENSSTUG00000013331	large2 (ENSSTUG00000013383) #24	KIFC3 (ENSSTUG00000014096)
Atlantic salmon	MODERN SPECIES	2	DAAM2 (ENSSSAG00000006847)	kif6 (ENSSSAG00000028036)	ENSSSAG00000103082	kcnk5 (ENSSSAG00000028208)	ENSSSAG00000028460	ENSSSAG00000029415	ENSSSAG00000119456	gnmt (ENSSSAG00000029625)	ENSSSAG00000108919 ##32	ENSSSAG00000029883	manea (ENSSSAG00000088022)	ENSSSAG00000089260	fhl5 (ENSSSAG00000030148)	ENSSSAG00000030457	ENSSSAG00000081834	ENSSSAG00000030520 #22	ENSSSAG00000031145	ENSSSAG00000103805	ENSSSAG00000040150	ENSSSAG00000047879	ENSSSAG00000048581	S39A1 (ENSSSAG00000048593)	ENSSSAG00000114542	ENSSSAG00000048604	ENSSSAG00000048727	ENSSSAG00000055872	ENSSSAG00000055972	ENSSSAG00000060109	ENSSSAG00000114815 #24	ENSSSAG00000121702	CNGB1 (ENSSSAG00000061103)
Salmo	ANCESTRAL SPECIES																	ENSGT00940000157089.B.i.b #22
Atlantic salmon	MODERN SPECIES	18	PPIC (ENSSSAG00000065198)	snx2 (ENSSSAG00000065248)	sncaip (ENSSSAG00000065341)	ENSSSAG00000065346	ENSSSAG00000088671	ENSSSAG00000109713	ENSSSAG00000065358	cmya5 (ENSSSAG00000121490)	ENSSSAG00000090027	ENSSSAG00000120104	tent2 (ENSSSAG00000105442)	ENSSSAG00000091228	homer1 (ENSSSAG00000065561)	otpb (ENSSSAG00000065781)	ENSSSAG00000122028	ENSSSAG00000065784 #22	ENSSSAG00000105171	ENSSSAG00000065807	ENSSSAG00000115174	ENSSSAG00000066206 #37	ENSSSAG00000071775	slc6a5 (ENSSSAG00000072543)	prmt3 (ENSSSAG00000072690)	ENSSSAG00000098754	ENSSSAG00000072744	ENSSSAG00000104665	ENSSSAG00000088498	ENSSSAG00000073025	rassf7 (ENSSSAG00000073026)	ENSSSAG00000073034	ENSSSAG00000073059
Oncorhynchus	ANCESTRAL SPECIES	32	ENSGT00940000158298.f	ENSGT00390000014679.d.a	ENSGT00940000159201.i	ENSGT00390000016567.m.a	ENSGT00940000157801	ENSGT00940000157697	ENSGT00940000164048	ENSGT00940000156775.e	ENSGT00530000063669.b.b	ENSGT00940000159420	ENSGT00390000006845	ENSGT00390000016054.a	ENSGT00940000155095.i.a.d	ENSGT00950000183028.a.a.b	ENSGT00940000154317.a.b.a.c	ENSGT00940000157089.B.i #22	ENSGT00940000158287.h
Rainbow trout	DUPLICATION
Rainbow trout	MODERN SPECIES	18	ENSOMYG00000057070	ENSOMYG00000075070	ENSOMYG00000067560	ENSOMYG00000057665	dapk2a (ENSOMYG00000065478)	ENSOMYG00000038661	ENSOMYG00000063389	ENSOMYG00000054717	IDH3A (ENSOMYG00000022101)	rab8b (ENSOMYG00000054197)	trpm1a (ENSOMYG00000022182)	ENSOMYG00000060194	ENSOMYG00000058602	gtf2a2 (ENSOMYG00000065240)	ENSOMYG00000062581	ENSOMYG00000037466 #22	ENSOMYG00000071032	ENSOMYG00000072221 #22	ENSOMYG00000059272	ENSOMYG00000034180	ENSOMYG00000038139	fhl5 (ENSOMYG00000038128)	ENSOMYG00000038114	ENSOMYG00000038112	manea (ENSOMYG00000038109)	ENSOMYG00000038102	ENSOMYG00000038080	ENSOMYG00000038070	ENSOMYG00000038054	ENSOMYG00000058392	kcnk5a (ENSOMYG00000038017)
Rainbow trout	MODERN SPECIES	18	ENSOMYG00000067560	ENSOMYG00000057665	dapk2a (ENSOMYG00000065478)	ENSOMYG00000038661	ENSOMYG00000063389	ENSOMYG00000054717	IDH3A (ENSOMYG00000022101)	rab8b (ENSOMYG00000054197)	trpm1a (ENSOMYG00000022182)	ENSOMYG00000060194	ENSOMYG00000058602	gtf2a2 (ENSOMYG00000065240)	ENSOMYG00000062581	ENSOMYG00000037466 #22	ENSOMYG00000071032	ENSOMYG00000072221 #22	ENSOMYG00000059272	ENSOMYG00000034180	ENSOMYG00000038139	fhl5 (ENSOMYG00000038128)	ENSOMYG00000038114	ENSOMYG00000038112	manea (ENSOMYG00000038109)	ENSOMYG00000038102	ENSOMYG00000038080	ENSOMYG00000038070	ENSOMYG00000038054	ENSOMYG00000058392	kcnk5a (ENSOMYG00000038017)	ENSOMYG00000038002	kif6 (ENSOMYG00000037982)
Oncorhynchus_a	ANCESTRAL SPECIES	28	ENSGT00940000158298.f	ENSGT00390000014679.d.a	ENSGT00940000159201.i	ENSGT00390000016567.m.a	ENSGT00940000157801	ENSGT00940000157697	ENSGT00940000164048	ENSGT00940000156775.e	ENSGT00530000063669.b.b	ENSGT00940000159420	ENSGT00390000006845	ENSGT00390000016054.a	ENSGT00940000155095.i.a.d	ENSGT00950000183028.a.a.b	ENSGT00940000154317.a.b.a.c	ENSGT00940000157089.B.i #22	ENSGT00940000158287.h
Chinook salmon	MODERN SPECIES	3	SMAD4 (ENSOTSG00005042083)	ENSOTSG00005042113	ENSOTSG00005042114	PPIC (ENSOTSG00005042115)	ENSOTSG00005042116	ENSOTSG00005042117	kif6 (ENSOTSG00005042119)	kcnk5a (ENSOTSG00005042122)	fam184aa (ENSOTSG00005042123)	SYT14 (ENSOTSG00005042125)	gnmt (ENSOTSG00005042126)	manea (ENSOTSG00005042127)	fut9a (ENSOTSG00005042128)	fhl5 (ENSOTSG00005042129)	col10a1a (ENSOTSG00005042130)	MAPK8IP1 (ENSOTSG00005042131) #22	ENSOTSG00005042132	ranbp3b (ENSOTSG00005042133)	ENSOTSG00005042134	pnhd (ENSOTSG00005042135)	CIB3 (ENSOTSG00005042136)	mocs1 (ENSOTSG00005042138)	DAAM2 (ENSOTSG00005042176)	ENSOTSG00005044834	MDGA1 (ENSOTSG00005012389)	ENSOTSG00005012601	zfand3 (ENSOTSG00005012602)	btbd9 (ENSOTSG00005012603)	glo1 (ENSOTSG00005012607)	eprs1 (ENSOTSG00005012639)	spdya (ENSOTSG00005016673)
Coho salmon	MODERN SPECIES	28	ENSOKIG00005041675	MDGA1 (ENSOKIG00005040470)	mocs1 (ENSOKIG00005040105)	DAAM2 (ENSOKIG00005039460)	kif6 (ENSOKIG00005039253)	ENSOKIG00005039197	kcnk5a (ENSOKIG00005039185)	fam184aa (ENSOKIG00005039157)	SYT14 (ENSOKIG00005039135)	gnmt (ENSOKIG00005039118)	manea (ENSOKIG00005039113)	fut9a (ENSOKIG00005039106)	fhl5 (ENSOKIG00005039069)	col10a1a (ENSOKIG00005039061)	ENSOKIG00005039002	MAPK8IP1 (ENSOKIG00005038986) #22	plpp7a (ENSOKIG00005038972)	ENSOKIG00005038961	PPIC (ENSOKIG00005038940)	ENSOKIG00005038912	ENSOKIG00005038891	SMAD4 (ENSOKIG00005038755)	MAPKAPK5 (ENSOKIG00005038172)	ENSOKIG00005037266	ENSOKIG00005037189	ENSOKIG00005037182	RASEF (ENSOKIG00005036936)	atxn2 (ENSOKIG00005035911)	SH2B3 (ENSOKIG00005035854)	ENSOKIG00005035823	PRR16 (ENSOKIG00005035816)
Huchen	MODERN SPECIES	1152																MAPK8IP1 (ENSHHUG00000034117) #22	lrp4 (ENSHHUG00000034142)	ENSHHUG00000034214
Salmoninae	ANCESTRAL SPECIES	200	ENSGT00940000157592	ENSGT00940000155742.a.b	ENSGT00390000008748.a	ENSGT00390000009378	ENSGT00940000155852	ENSGT00940000159786.b	ENSGT00940000155798	ENSGT00390000001485	ENSGT00390000012355.A.a.a.a.a	ENSGT00940000155776.b	ENSGT00940000155831.bb	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00940000159952.a.a	ENSGT00940000157089.B.j #22	ENSGT00940000158287.g	ENSGT00390000014757.x #37	ENSGT00810000125439.A.k
Salmoninae_a	ANCESTRAL SPECIES	47	ENSGT00940000155742.a.b	ENSGT00390000008748.a	ENSGT00390000009378	ENSGT00940000155852	ENSGT00940000159786.b	ENSGT00940000155798	ENSGT00390000001485	ENSGT00390000012355.A.a.a.a.a	ENSGT00940000155776.b	ENSGT00940000155831.bb	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00940000159952.a.a	ENSGT00940000177848.b	ENSGT00940000157089.B.j #22	ENSGT00940000158287.g	ENSGT00390000014757.x #37	ENSGT00810000125439.A.k	ENSGT00940000154963.g.a.a	ENSGT00940000156825.i	ENSGT00940000164669.e	ENSGT00940000158565.r	ENSGT00940000153561.b.a.a.b.y.b.b	ENSGT00940000163916.p.b	ENSGT00950000182839.B.b.a.c	ENSGT00940000157462.C.c.a.i	ENSGT00940000157661.e.b.h	ENSGT00940000161238.l.c	ENSGT00940000158758.j #24	ENSGT00940000162283.b
Oncorhynchus	ANCESTRAL SPECIES		ENSGT00940000157592	ENSGT00940000155742.a.b	ENSGT00390000008748.a	ENSGT00390000009378	ENSGT00940000155852	ENSGT00940000155798	ENSGT00390000001485	ENSGT00390000012355.A.a.a.a.a	ENSGT00940000155776.b	ENSGT00940000155831.bb	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00940000159952.a.a	ENSGT00940000177848.b	ENSGT00940000157089.B.j #22	ENSGT00940000158287.g	ENSGT00390000014757.x #37	ENSGT00810000125439.A.k	ENSGT00940000154963.g.a.a	ENSGT00940000156825.i	ENSGT00940000164669.e	ENSGT00940000158565.r	ENSGT00940000153561.b.a.a.b.y.b.b	ENSGT00940000163916.p.b	ENSGT00950000182839.B.b.a.c	ENSGT00940000157462.C.c.a.i	ENSGT00940000157661.e.b.h	ENSGT00940000161238.l.c	ENSGT00940000158758.j #24	ENSGT00940000162283.b
Rainbow trout	MODERN SPECIES	27	ENSOMYG00000042453	ENSOMYG00000042474	ENSOMYG00000029686	ENSOMYG00000001222	ENSOMYG00000001277	ENSOMYG00000001330	ENSOMYG00000001383	cmya5 (ENSOMYG00000059165)	tent2 (ENSOMYG00000001690)	ENSOMYG00000065004	homer1b (ENSOMYG00000001923)	ENSOMYG00000049056	ENSOMYG00000002004	otpb (ENSOMYG00000002018)	ENSOMYG00000002051	ENSOMYG00000002102 #22	ENSOMYG00000002959	ENSOMYG00000073180	ENSOMYG00000065020	ENSOMYG00000004181 #37	ENSOMYG00000005965	slc6a5 (ENSOMYG00000008086)	prmt3 (ENSOMYG00000008629)	ENSOMYG00000008738	ENSOMYG00000009421	ENSOMYG00000077344	ENSOMYG00000074580	ENSOMYG00000011052	rassf7b (ENSOMYG00000011058)	ENSOMYG00000011125	ENSOMYG00000011342
Oncorhynchus_a	ANCESTRAL SPECIES		ENSGT00940000157592	ENSGT00940000155742.a.b	ENSGT00390000008748.a	ENSGT00390000009378	ENSGT00940000155852	ENSGT00940000155798	ENSGT00390000001485	ENSGT00390000012355.A.a.a.a.a	ENSGT00940000155776.b	ENSGT00940000155831.bb	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00940000159952.a.a	ENSGT00940000177848.b	ENSGT00940000157089.B.j #22	ENSGT00940000158287.g	ENSGT00390000014757.x #37	ENSGT00810000125439.A.k	ENSGT00940000154963.g.a.a	ENSGT00940000156825.i	ENSGT00940000164669.e	ENSGT00940000158565.r	ENSGT00940000153561.b.a.a.b.y.b.b	ENSGT00940000163916.p.b	ENSGT00950000182839.B.b.a.c	ENSGT00940000157462.C.c.a.i	ENSGT00940000157661.e.b.h	ENSGT00940000161238.l.c	ENSGT00940000158758.j #24	ENSGT00940000162283.b
Coho salmon	MODERN SPECIES	22	ZNF608 (ENSOKIG00005019661)	CEP120 (ENSOKIG00005019683)	PRDM6 (ENSOKIG00005019721)	SNX2 (ENSOKIG00005019761)	sncaip (ENSOKIG00005019875)	ENSOKIG00005019886	ankrd34bb (ENSOKIG00005020096)	ENSOKIG00005020116	ENSOKIG00005020179	cmya5 (ENSOKIG00005020228)	tent2 (ENSOKIG00005020289)	homer1b (ENSOKIG00005020851)	ENSOKIG00005000007	otpb (ENSOKIG00005000029)	ENSOKIG00005000054	MAPK8IP1 (ENSOKIG00005000068) #22	lrp4 (ENSOKIG00005000443)	ENSOKIG00005000939 #37	NELL1 (ENSOKIG00005001201)	slc6a5 (ENSOKIG00005001966)	prmt3 (ENSOKIG00005002480)	slc39a1 (ENSOKIG00005002802)	CTTN (ENSOKIG00005002872)	ENSOKIG00005003325	ENSOKIG00005003330	rassf7b (ENSOKIG00005003332)	BRSK2 (ENSOKIG00005003392)	ABTB2 (ENSOKIG00005003513)	ENSOKIG00005003542	large2 (ENSOKIG00005003653) #24	ENSOKIG00005004578
Salmo	ANCESTRAL SPECIES	30	ENSGT00940000155742.a.b	ENSGT00390000008748.a	ENSGT00390000009378	ENSGT00940000155852	ENSGT00940000159786.b	ENSGT00940000155798	ENSGT00390000001485	ENSGT00390000012355.A.a.a.a.a	ENSGT00940000155776.b	ENSGT00940000155831.bb	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00940000159952.a.a	ENSGT00940000177848.b	ENSGT00940000157089.B.j #22	ENSGT00940000158287.g	ENSGT00390000014757.x #37	ENSGT00810000125439.A.k	ENSGT00940000154963.g.a.a	ENSGT00940000156825.i	ENSGT00940000164669.e	ENSGT00940000158565.r	ENSGT00940000153561.b.a.a.b.y.b.b	ENSGT00960000187709	ENSGT00950000182839.B.b.a.c	ENSGT00940000157462.C.c.a.i	ENSGT00940000157661.e.b.h	ENSGT00940000161238.l.c	ENSGT00940000158758.j #24	ENSGT00940000162283.b
River trout	MODERN SPECIES	21	ZNF608 (ENSSTUG00000019950)	CEP120 (ENSSTUG00000019828)	PRDM6 (ENSSTUG00000019801)	PPIC (ENSSTUG00000019755)	SNX2 (ENSSTUG00000019638)	sncaip (ENSSTUG00000019613)	ankrd34bb (ENSSTUG00000019564)	ENSSTUG00000019545	ENSSTUG00000019415	cmya5 (ENSSTUG00000019292)	tent2 (ENSSTUG00000019077)	homer1b (ENSSTUG00000019033)	ENSSTUG00000019023	otpb (ENSSTUG00000019011)	ENSSTUG00000018997	MAPK8IP1 (ENSSTUG00000018959) #22	lrp4 (ENSSTUG00000018050)	ENSSTUG00000017807 #37	NELL1 (ENSSTUG00000016334)	slc6a5 (ENSSTUG00000015956)	prmt3 (ENSSTUG00000015845)	slc39a1 (ENSSTUG00000015833)	CTTN (ENSSTUG00000015533)	ENSSTUG00000015519	ENSSTUG00000015498	ENSSTUG00000015490	rassf7b (ENSSTUG00000015487)	BRSK2 (ENSSTUG00000014505)	ABTB2 (ENSSTUG00000014441)	ENSSTUG00000014370	large2 (ENSSTUG00000013070) #24
Huchen	MODERN SPECIES	28												tent2 (ENSHHUG00000034180)	homer1b (ENSHHUG00000034168)	otpb (ENSHHUG00000034160)	lemd1 (ENSHHUG00000034147)	MAPK8IP1 (ENSHHUG00000034135) #22	lrp4 (ENSHHUG00000033926)	ENSHHUG00000033913	ENSHHUG00000033824 #37	ENSHHUG00000033813	ENSHHUG00000033785
Spotted gar	MODERN SPECIES	262													ENSLOCG00000014650	slc35c1 (ENSLOCG00000014653) #20	cry2 (ENSLOCG00000014655) #21	MAPK8IP1 (ENSLOCG00000014667) #22	cstpp1 (ENSLOCG00000014671)	lrp4 (ENSLOCG00000014674)	ckap5 (ENSLOCG00000014683) #37