Vertebrata	DUPLICATION
Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000157089.B #22
Gnathostomata	ANCESTRAL SPECIES																	ENSGT00940000157089.B #22
Euteleostomi	ANCESTRAL SPECIES	42	ENSGT00940000161128	ENSGT01090000260003.a.a	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000164361	ENSGT00730000111007.a.b	ENSGT00940000157530.b	ENSGT00390000013899.b	ENSGT00940000161262 #19	ENSGT00940000153571.b	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22
Sarcopterygii	ANCESTRAL SPECIES	123	ENSGT00940000164760	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161051.b	ENSGT01020000230346.E	ENSGT00390000015299.a.a	ENSGT00390000013899.b	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25
Tetrapoda	ANCESTRAL SPECIES	9	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000164760	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161051.b	ENSGT00390000013899.b	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT01030000234629.E.b	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000164059	ENSGT00390000014757
Amniota	ANCESTRAL SPECIES	20	ENSGT00390000016821 #9	ENSGT00940000164760	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00930000151992	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161051.b	ENSGT00390000013899.b	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000164059	ENSGT00390000014757	ENSGT00940000158287
Mammalia	ANCESTRAL SPECIES	9	ENSGT00390000016821 #9	ENSGT00940000164760	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00930000151992	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00390000013899.b	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000164059	ENSGT00390000014757
Theria	ANCESTRAL SPECIES	8	ENSGT00390000016821 #9	ENSGT00940000164760	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00930000151992	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00390000013899.b	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000164059	ENSGT00390000014757
Eutheria	ANCESTRAL SPECIES	3	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00930000151992	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00930000151992	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00910000148141	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00910000148141	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37
Primates	ANCESTRAL SPECIES		ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00910000148141	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37
Strepsirrhini	ANCESTRAL SPECIES	6	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Lemuriformes	ANCESTRAL SPECIES	16	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315.i.b #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Lemuriformes_a	ANCESTRAL SPECIES	75	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315.i.b #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Greater bamboo lemur	MODERN SPECIES	653	HSD17B12 (ENSPSMG00000011395) #7	ALKBH3 (ENSPSMG00000011436) #8	C11orf96 (ENSPSMG00000011448) #9	ACCSL (ENSPSMG00000011452) #10	ACCS (ENSPSMG00000011499) #11	EXT2 (ENSPSMG00000011571) #12	ALX4 (ENSPSMG00000011596) #13	CD82 (ENSPSMG00000011626) #14	TSPAN18 (ENSPSMG00000011657) #15	TP53I11 (ENSPSMG00000011679) #16	PRDM11 (ENSPSMG00000011702) #17	SYT13 (ENSPSMG00000011718) #18	CHST1 (ENSPSMG00000011726) #19	ENSPSMG00000011737 #20	CRY2 (ENSPSMG00000011764) #21	MAPK8IP1 (ENSPSMG00000011822) #22	FREY1 (ENSPSMG00000011844) #23	PEX16 (ENSPSMG00000011863) #24	LARGE2 (ENSPSMG00000011890) #25	PHF21A (ENSPSMG00000012023) #26	ENSPSMG00000012083 #27	CREB3L1 (ENSPSMG00000012117) #28	DGKZ (ENSPSMG00000012472) #29	MDK (ENSPSMG00000012582) #30	CHRM4 (ENSPSMG00000012597) #31	AMBRA1 (ENSPSMG00000012734) #32	HARBI1 (ENSPSMG00000012785) #33	ATG13 (ENSPSMG00000012974) #34	ARHGAP1 (ENSPSMG00000013070) #35	ZNF408 (ENSPSMG00000013083) #36	F2 (ENSPSMG00000013119) #37
Coquerels sifaka	MODERN SPECIES	328										TSPAN18 (ENSPCOG00000019792) #15	TP53I11 (ENSPCOG00000012315) #16	PRDM11 (ENSPCOG00000000158) #17	SYT13 (ENSPCOG00000023291) #18	SLC35C1 (ENSPCOG00000024924) ##20	CRY2 (ENSPCOG00000028836) #21	MAPK8IP1 (ENSPCOG00000004558) #22	FREY1 (ENSPCOG00000010411) #23	PEX16 (ENSPCOG00000015220) #24	LARGE2 (ENSPCOG00000000893) #25	PHF21A (ENSPCOG00000005609) #26	CREB3L1 (ENSPCOG00000025289) #28	DGKZ (ENSPCOG00000026865) #29	MDK (ENSPCOG00000017622) #30	CHRM4 (ENSPCOG00000013773) #31	AMBRA1 (ENSPCOG00000028231) #32	HARBI1 (ENSPCOG00000027989) #33	ATG13 (ENSPCOG00000023763) #34	ARHGAP1 (ENSPCOG00000020308) #35	ZNF408 (ENSPCOG00000028698) #36	F2 (ENSPCOG00000018345) #37	CKAP5 (ENSPCOG00000017517)
Mouse lemur	MODERN SPECIES	27	C11orf96 (ENSMICG00000041610) #9	ENSMICG00000034539	ACCSL (ENSMICG00000014661) #10	ACCS (ENSMICG00000007981) #11	ENSMICG00000028094	EXT2 (ENSMICG00000014680) #12	ALX4 (ENSMICG00000048133) #13	CD82 (ENSMICG00000010264) #14	TSPAN18 (ENSMICG00000006504) #15	TP53I11 (ENSMICG00000033784) #16	PRDM11 (ENSMICG00000014133) #17	SYT13 (ENSMICG00000029048) #18	CHST1 (ENSMICG00000037424) #19	SLC35C1 (ENSMICG00000014174) ##20	CRY2 (ENSMICG00000014177) #21	MAPK8IP1 (ENSMICG00000014190) #22	FREY1 (ENSMICG00000042017) #23	PEX16 (ENSMICG00000014206) #24	LARGE2 (ENSMICG00000014226) #25	PHF21A (ENSMICG00000014259) #26	CREB3L1 (ENSMICG00000006853) #28	DGKZ (ENSMICG00000006865) #29	MDK (ENSMICG00000006889) #30	CHRM4 (ENSMICG00000042428) #31	AMBRA1 (ENSMICG00000006891) #32	HARBI1 (ENSMICG00000029266) #33	ATG13 (ENSMICG00000006905) #34	ARHGAP1 (ENSMICG00000006918) #35	ZNF408 (ENSMICG00000045320) #36	F2 (ENSMICG00000006934) #37	CKAP5 (ENSMICG00000006951)
Bushbaby	MODERN SPECIES	116	ENSOGAG00000028628 #9	ENSOGAG00000013452 #10	ACCS (ENSOGAG00000013457) #11	EXT2 (ENSOGAG00000013459) #12	ENSOGAG00000029737	ALX4 (ENSOGAG00000034351) #13	CD82 (ENSOGAG00000015627) #14	TSPAN18 (ENSOGAG00000015266) #15	TP53I11 (ENSOGAG00000015257) #16	ENSOGAG00000004585 #17	SYT13 (ENSOGAG00000004588) #18	ENSOGAG00000034921	CHST1 (ENSOGAG00000025459) #19	SLC35C1 (ENSOGAG00000029726) #20	CRY2 (ENSOGAG00000012553) #21	MAPK8IP1 (ENSOGAG00000012556) #22	FREY1 (ENSOGAG00000034239) #23	PEX16 (ENSOGAG00000012559) #24	LARGE2 (ENSOGAG00000012560) #25	PHF21A (ENSOGAG00000012563) #26	ENSOGAG00000027200	CREB3L1 (ENSOGAG00000008829) #28	DGKZ (ENSOGAG00000002350) #29	MDK (ENSOGAG00000002353) #30	CHRM4 (ENSOGAG00000033812) #31	AMBRA1 (ENSOGAG00000002355) #32	ENSOGAG00000033750	HARBI1 (ENSOGAG00000004554) #33	ATG13 (ENSOGAG00000004547) #34	ARHGAP1 (ENSOGAG00000014288) #35	ZNF408 (ENSOGAG00000034080) #36
Haplorrhini	ANCESTRAL SPECIES		ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00910000148141	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37
Simiiformes	ANCESTRAL SPECIES		ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00910000148141	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00410000028889	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00910000148141	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00410000028889	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00910000148141	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37
Gibbon	DUPLICATION
Gibbon	MODERN SPECIES	5	PTPMT1 (ENSNLEG00000033815)	KBTBD4 (ENSNLEG00000014672)	NDUFS3 (ENSNLEG00000028559)	ENSNLEG00000014694	MTCH2 (ENSNLEG00000034575)	AGBL2 (ENSNLEG00000014711)	FNBP4 (ENSNLEG00000014720)	NUP160 (ENSNLEG00000014735)	ENSNLEG00000033967	PTPRJ (ENSNLEG00000014775)	ENSNLEG00000027973	ENSNLEG00000031203	ENSNLEG00000017985	SLC35C1 (ENSNLEG00000017984) #20	ENSNLEG00000017983 #21	ENSNLEG00000017982 #22	FREY1 (ENSNLEG00000032767) #23	PEX16 (ENSNLEG00000031315) #24	SYT13 (ENSNLEG00000017977) #18	PRDM11 (ENSNLEG00000017975) #17	TSPAN18 (ENSNLEG00000031862) #15	ENSNLEG00000017974 #16	CD82 (ENSNLEG00000017971) #14	EXT2 (ENSNLEG00000017968) #12	ACCS (ENSNLEG00000017967) #11	ACCSL (ENSNLEG00000017966) #10	ENSNLEG00000017965 #9	ENSNLEG00000030198	ALKBH3 (ENSNLEG00000027521) #8	ENSNLEG00000033255	HSD17B12 (ENSNLEG00000035088) #7
Gibbon	MODERN SPECIES	9	HEXIM2 (ENSNLEG00000031095)	ENSNLEG00000005025	SPATA32 (ENSNLEG00000005016)	MAP3K14 (ENSNLEG00000004986)	PLEKHM1 (ENSNLEG00000004936)	ENSNLEG00000036274	ENSNLEG00000004922	WNT9B (ENSNLEG00000004916)	WNT3 (ENSNLEG00000004909)	NSF (ENSNLEG00000004836)	ENSNLEG00000031038	ENSNLEG00000004810	MAPT (ENSNLEG00000004803)	ENSNLEG00000030604	KANSL1 (ENSNLEG00000004760)	ENSNLEG00000004757 #22	ENSNLEG00000031127	ENSNLEG00000004744	ENSNLEG00000004725	MYL4 (ENSNLEG00000006209)	ITGB3 (ENSNLEG00000004670)	EFCAB13 (ENSNLEG00000032324)	ENSNLEG00000031646	ENSNLEG00000033004	EFCAB3 (ENSNLEG00000004662)	ENSNLEG00000032430	ENSNLEG00000004645	MRC2 (ENSNLEG00000004611)	MARCHF10 (ENSNLEG00000004603)	TANC2 (ENSNLEG00000004554)	ENSNLEG00000028313
Hominidae	ANCESTRAL SPECIES	1	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00410000028889	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	20	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00410000028889	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00410000028889	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Pan	ANCESTRAL SPECIES	1	ENSGT00950000183070.a.b.g.b.b.a.b	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00410000028889	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Chimpanzee	MODERN SPECIES	2	ALKBH3 (ENSPTRG00000003523) #8	ENSPTRG00000047659	ENSPTRG00000046726 #9	ACCSL (ENSPTRG00000028662) #10	EXT2 (ENSPTRG00000003528) #12	ALX4 (ENSPTRG00000003529) #13	CD82 (ENSPTRG00000003530) #14	TP53I11 (ENSPTRG00000003532) #16	TSPAN18 (ENSPTRG00000003531) #15	PRDM11 (ENSPTRG00000003533) #17	SYT13 (ENSPTRG00000003534) #18	CHST1 (ENSPTRG00000003535) #19	ENSPTRG00000028656	SLC35C1 (ENSPTRG00000003536) #20	CRY2 (ENSPTRG00000003537) #21	MAPK8IP1 (ENSPTRG00000003538) #22	FREY1 (ENSPTRG00000050232) #23	PEX16 (ENSPTRG00000003539) #24	LARGE2 (ENSPTRG00000050910) #25	PHF21A (ENSPTRG00000003542) #26	CREB3L1 (ENSPTRG00000003543) #28	DGKZ (ENSPTRG00000003545) #29	MDK (ENSPTRG00000047115) #30	CHRM4 (ENSPTRG00000038696) #31	AMBRA1 (ENSPTRG00000003546) #32	ENSPTRG00000043648	HARBI1 (ENSPTRG00000003548) #33	ATG13 (ENSPTRG00000003549) #34	ARHGAP1 (ENSPTRG00000003550) #35	ZNF408 (ENSPTRG00000003551) #36	F2 (ENSPTRG00000003552) #37
Bonobo	MODERN SPECIES	2	HSD17B12 (ENSPPAG00000041012) #7	ENSPPAG00000043963	ALKBH3 (ENSPPAG00000028729) #8	ENSPPAG00000033607	ENSPPAG00000033790 #9	ACCSL (ENSPPAG00000033128) #10	EXT2 (ENSPPAG00000041401) #12	CD82 (ENSPPAG00000022324) #14	TSPAN18 (ENSPPAG00000031547) #15	ENSPPAG00000028354 #16	PRDM11 (ENSPPAG00000043398) #17	SYT13 (ENSPPAG00000027303) #18	ENSPPAG00000035471	SLC35C1 (ENSPPAG00000039643) #20	CRY2 (ENSPPAG00000033780) #21	MAPK8IP1 (ENSPPAG00000010367) #22	FREY1 (ENSPPAG00000027942) #23	PEX16 (ENSPPAG00000042419) #24	LARGE2 (ENSPPAG00000037963) #25	PHF21A (ENSPPAG00000040226) #26	CREB3L1 (ENSPPAG00000029634) #28	DGKZ (ENSPPAG00000038574) #29	MDK (ENSPPAG00000023561) #30	CHRM4 (ENSPPAG00000025475) #31	AMBRA1 (ENSPPAG00000034195) #32	HARBI1 (ENSPPAG00000035636) #33	ATG13 (ENSPPAG00000042268) #34	ARHGAP1 (ENSPPAG00000027953) #35	ZNF408 (ENSPPAG00000034993) #36	F2 (ENSPPAG00000041509) #37	CKAP5 (ENSPPAG00000030676)
Human	MODERN SPECIES	2	HSD17B12 (ENSG00000149084) #7	ALKBH3 (ENSG00000166199) #8	C11orf96 (ENSG00000187479) #9	ACCSL (ENSG00000205126) #10	ACCS (ENSG00000110455) #11	EXT2 (ENSG00000151348) #12	ALX4 (ENSG00000052850) #13	CD82 (ENSG00000085117) #14	TSPAN18 (ENSG00000157570) #15	TP53I11 (ENSG00000175274) #16	PRDM11 (ENSG00000019485) #17	SYT13 (ENSG00000019505) #18	CHST1 (ENSG00000175264) #19	SLC35C1 (ENSG00000181830) #20	CRY2 (ENSG00000121671) #21	MAPK8IP1 (ENSG00000121653) #22	FREY1 (ENSG00000234776) #23	PEX16 (ENSG00000121680) #24	LARGE2 (ENSG00000165905) #25	PHF21A (ENSG00000135365) #26	CREB3L1 (ENSG00000157613) #28	DGKZ (ENSG00000149091) #29	MDK (ENSG00000110492) #30	CHRM4 (ENSG00000180720) #31	AMBRA1 (ENSG00000110497) #32	HARBI1 (ENSG00000180423) #33	ATG13 (ENSG00000175224) #34	ARHGAP1 (ENSG00000175220) #35	ZNF408 (ENSG00000175213) #36	F2 (ENSG00000180210) #37	CKAP5 (ENSG00000175216)
Gorilla	MODERN SPECIES	2	ALKBH3 (ENSGGOG00000001931) #8	ENSGGOG00000007196	ENSGGOG00000001934 #9	ACCSL (ENSGGOG00000004173) #10	ACCS (ENSGGOG00000003124) #11	EXT2 (ENSGGOG00000010737) #12	ALX4 (ENSGGOG00000014265) #13	CD82 (ENSGGOG00000010189) #14	TSPAN18 (ENSGGOG00000006952) #15	ENSGGOG00000006941 #16	PRDM11 (ENSGGOG00000017094) #17	SYT13 (ENSGGOG00000017096) #18	ENSGGOG00000014803	SLC35C1 (ENSGGOG00000001327) #20	CRY2 (ENSGGOG00000002293) #21	ENSGGOG00000002296 #22	FREY1 (ENSGGOG00000027882) #23	PEX16 (ENSGGOG00000002298) #24	LARGE2 (ENSGGOG00000002302) #25	PHF21A (ENSGGOG00000002304) #26	CREB3L1 (ENSGGOG00000015181) #28	DGKZ (ENSGGOG00000011849) #29	MDK (ENSGGOG00000011872) #30	CHRM4 (ENSGGOG00000026871) #31	AMBRA1 (ENSGGOG00000011880) #32	HARBI1 (ENSGGOG00000004410) #33	ATG13 (ENSGGOG00000005689) #34	ARHGAP1 (ENSGGOG00000005697) #35	ZNF408 (ENSGGOG00000010152) #36	F2 (ENSGGOG00000006967) #37	CKAP5 (ENSGGOG00000006980)
Orangutan	MODERN SPECIES	2	HSD17B12 (ENSPPYG00000003343) #7	ALKBH3 (ENSPPYG00000003342) #8	ENSPPYG00000003341 #9	ACCSL (ENSPPYG00000003340) #10	ACCS (ENSPPYG00000003339) #11	EXT2 (ENSPPYG00000003338) #12	ALX4 (ENSPPYG00000003337) #13	CD82 (ENSPPYG00000003336) #14	TSPAN18 (ENSPPYG00000003335) #15	TP53I11 (ENSPPYG00000003334) #16	PRDM11 (ENSPPYG00000036125) #17	SYT13 (ENSPPYG00000033572) #18	CHST1 (ENSPPYG00000031467) #19	SLC35C1 (ENSPPYG00000032339) #20	CRY2 (ENSPPYG00000003329) #21	MAPK8IP1 (ENSPPYG00000003328) #22	FREY1 (ENSPPYG00000041330) #23	PEX16 (ENSPPYG00000003327) #24	LARGE2 (ENSPPYG00000003326) #25	PHF21A (ENSPPYG00000003325) #26	CREB3L1 (ENSPPYG00000003324) #28	DGKZ (ENSPPYG00000003323) #29	ENSPPYG00000038515 #30	CHRM4 (ENSPPYG00000029365) #31	AMBRA1 (ENSPPYG00000003322) #32	HARBI1 (ENSPPYG00000003321) #33	ATG13 (ENSPPYG00000003320) #34	ARHGAP1 (ENSPPYG00000003319) #35	ZNF408 (ENSPPYG00000003318) #36	F2 (ENSPPYG00000003317) #37	CKAP5 (ENSPPYG00000003316)
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00410000028889	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b.l #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00910000148141	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37
Rhinopithecus	ANCESTRAL SPECIES	64	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00410000028889	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b.l #30	ENSGT00940000160394.a #31	ENSGT00390000016223.b #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Black snub-nosed monkey	MODERN SPECIES	1919	ALKBH3 (ENSRBIG00000034161) #8	ENSRBIG00000035154 #9	ACCSL (ENSRBIG00000009585) #10	ACCS (ENSRBIG00000030372) #11	EXT2 (ENSRBIG00000028133) #12	ALX4 (ENSRBIG00000037930) #13	CD82 (ENSRBIG00000027262) #14	TSPAN18 (ENSRBIG00000033885) #15	TP53I11 (ENSRBIG00000038004) #16	PRDM11 (ENSRBIG00000038416) #17	SYT13 (ENSRBIG00000039991) #18	CHST1 (ENSRBIG00000041102) #19	ENSRBIG00000031332	SLC35C1 (ENSRBIG00000037020) #20	CRY2 (ENSRBIG00000011544) #21	MAPK8IP1 (ENSRBIG00000044423) #22	FREY1 (ENSRBIG00000026731) #23	PEX16 (ENSRBIG00000038630) #24	LARGE2 (ENSRBIG00000043312) #25	PHF21A (ENSRBIG00000033320) #26	CREB3L1 (ENSRBIG00000029817) #28	DGKZ (ENSRBIG00000043927) #29	ENSRBIG00000033689 #30	ENSRBIG00000031128 #32
Golden snub-nosed monkey	MODERN SPECIES	1568						CD82 (ENSRROG00000044249) #14	TSPAN18 (ENSRROG00000005654) #15	TP53I11 (ENSRROG00000034132) #16	PRDM11 (ENSRROG00000044429) #17	SYT13 (ENSRROG00000038088) #18	CHST1 (ENSRROG00000007899) #19	ENSRROG00000012829	ENSRROG00000005354	SLC35C1 (ENSRROG00000001258) #20	CRY2 (ENSRROG00000031775) #21	MAPK8IP1 (ENSRROG00000000852) #22	FREY1 (ENSRROG00000033078) #23	PEX16 (ENSRROG00000038942) #24	LARGE2 (ENSRROG00000030434) #25	PHF21A (ENSRROG00000034376) #26	CREB3L1 (ENSRROG00000041731) #28	DGKZ (ENSRROG00000044186) #29	ENSRROG00000040007 #30	CHRM4 (ENSRROG00000024047) #31	AMBRA1 (ENSRROG00000034630) #32	HARBI1 (ENSRROG00000031237) #33	ATG13 (ENSRROG00000031087) #34	ARHGAP1 (ENSRROG00000037876) #35	ZNF408 (ENSRROG00000033904) #36	F2 (ENSRROG00000038131) #37	CKAP5 (ENSRROG00000039765)
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00410000028889	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b.l #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00910000148141	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37
Vervet Monkey	MODERN SPECIES		ALKBH3 (ENSCSAG00000005539) #8	ENSCSAG00000005541 #9	ACCSL (ENSCSAG00000005546) #10	ACCS (ENSCSAG00000005552) #11	EXT2 (ENSCSAG00000005563) #12	ALX4 (ENSCSAG00000005569) #13	CD82 (ENSCSAG00000005577) #14	TSPAN18 (ENSCSAG00000005584) #15	TP53I11 (ENSCSAG00000005590) #16	ENSCSAG00000005593 #17	SYT13 (ENSCSAG00000005596) #18	CHST1 (ENSCSAG00000019211) #19	SLC35C1 (ENSCSAG00000005597) #20	CRY2 (ENSCSAG00000005615) #21	FREY1 (ENSCSAG00000005627) #23	MAPK8IP1 (ENSCSAG00000005632) #22	PEX16 (ENSCSAG00000005637) #24	LARGE2 (ENSCSAG00000005648) #25	PHF21A (ENSCSAG00000005653) #26	CREB3L1 (ENSCSAG00000005658) #28	DGKZ (ENSCSAG00000005662) #29	ENSCSAG00000005668 #30	CHRM4 (ENSCSAG00000019210) #31	AMBRA1 (ENSCSAG00000005675) #32	HARBI1 (ENSCSAG00000005676) #33	ATG13 (ENSCSAG00000005678) #34	ARHGAP1 (ENSCSAG00000005680) #35	ZNF408 (ENSCSAG00000005681) #36	F2 (ENSCSAG00000005684) #37	CKAP5 (ENSCSAG00000005686)	LRP4 (ENSCSAG00000005688)
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00410000028889	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b.l #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00910000148141	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37
Macaca	ANCESTRAL SPECIES	2	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00410000028889	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b.l #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Pig-tailed macaque	MODERN SPECIES	485	ENSMNEG00000041918	ALKBH3 (ENSMNEG00000042403) #8	C11orf96 (ENSMNEG00000026217) #9	ACCSL (ENSMNEG00000028079) #10	ACCS (ENSMNEG00000038482) #11	EXT2 (ENSMNEG00000018683) #12	ALX4 (ENSMNEG00000037261) #13	CD82 (ENSMNEG00000031650) #14	TSPAN18 (ENSMNEG00000036152) #15	TP53I11 (ENSMNEG00000039232) #16	PRDM11 (ENSMNEG00000028352) #17	SYT13 (ENSMNEG00000042088) #18	ENSMNEG00000040801	SLC35C1 (ENSMNEG00000031995) #20	CRY2 (ENSMNEG00000032337) #21	MAPK8IP1 (ENSMNEG00000038621) #22	FREY1 (ENSMNEG00000035102) #23	PEX16 (ENSMNEG00000043356) #24	LARGE2 (ENSMNEG00000040995) #25	PHF21A (ENSMNEG00000041377) #26	CREB3L1 (ENSMNEG00000041356) #28	DGKZ (ENSMNEG00000042881) #29	MDK (ENSMNEG00000006686) #30	CHRM4 (ENSMNEG00000019466) #31	AMBRA1 (ENSMNEG00000041218) #32	HARBI1 (ENSMNEG00000039470) #33	ATG13 (ENSMNEG00000028546) #34	ARHGAP1 (ENSMNEG00000044079) #35	ZNF408 (ENSMNEG00000040215) #36	F2 (ENSMNEG00000040864) #37	CKAP5 (ENSMNEG00000045449)
Macaca_a	ANCESTRAL SPECIES	3	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT01100000263577.a.a.b.a.b.a.a.b.b.a.a	ENSGT00940000162841 #10	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00410000028889	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000161627.a.a.a.a.b.a.a.a.a.b.b.a.a.b.b.a	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b.l #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Crab-eating macaque	MODERN SPECIES	5	ALKBH3 (ENSMFAG00000031334) #8	C11orf96 (ENSMFAG00000030397) #9	ENSMFAG00000064908	ACCSL (ENSMFAG00000041332) #10	EXT2 (ENSMFAG00000043519) #12	ALX4 (ENSMFAG00000002075) #13	CD82 (ENSMFAG00000035741) #14	TSPAN18 (ENSMFAG00000054272) #15	TP53I11 (ENSMFAG00000035363) #16	PRDM11 (ENSMFAG00000045073) #17	SYT13 (ENSMFAG00000056606) #18	CHST1 (ENSMFAG00000033195) #19	ENSMFAG00000029506	SLC35C1 (ENSMFAG00000052749) #20	CRY2 (ENSMFAG00000045219) #21	MAPK8IP1 (ENSMFAG00000045393) #22	FREY1 (ENSMFAG00000056527) #23	PEX16 (ENSMFAG00000002349) #24	LARGE2 (ENSMFAG00000002253) #25	PHF21A (ENSMFAG00000043688) #26	ENSMFAG00000058269	CREB3L1 (ENSMFAG00000031047) #28	DGKZ (ENSMFAG00000032211) #29	MDK (ENSMFAG00000000818) #30	CHRM4 (ENSMFAG00000021204) #31	ENSMFAG00000002000 #32	HARBI1 (ENSMFAG00000002487) #33	ATG13 (ENSMFAG00000038288) #34	ARHGAP1 (ENSMFAG00000036912) #35	ZNF408 (ENSMFAG00000036575) #36	F2 (ENSMFAG00000031977) #37
Rhesus	MODERN SPECIES	5	ENSMMUG00000059789	ACCSL (ENSMMUG00000019693) #10	EXT2 (ENSMMUG00000013095) #12	ALX4 (ENSMMUG00000049355) #13	ENSMMUG00000053780	CD82 (ENSMMUG00000019268) #14	TSPAN18 (ENSMMUG00000000368) #15	TP53I11 (ENSMMUG00000059728) #16	ENSMMUG00000052571	PRDM11 (ENSMMUG00000015106) #17	SYT13 (ENSMMUG00000011449) #18	CHST1 (ENSMMUG00000000874) #19	ENSMMUG00000047219	SLC35C1 (ENSMMUG00000002452) #20	CRY2 (ENSMMUG00000002453) #21	MAPK8IP1 (ENSMMUG00000002456) #22	PEX16 (ENSMMUG00000008878) #24	LARGE2 (ENSMMUG00000002611) #25	PHF21A (ENSMMUG00000002617) #26	ENSMMUG00000053388	CREB3L1 (ENSMMUG00000018571) #28	DGKZ (ENSMMUG00000021446) #29	MDK (ENSMMUG00000038138) #30	CHRM4 (ENSMMUG00000039412) #31	AMBRA1 (ENSMMUG00000011526) #32	HARBI1 (ENSMMUG00000059160) #33	ATG13 (ENSMMUG00000019672) #34	ARHGAP1 (ENSMMUG00000007831) #35	ZNF408 (ENSMMUG00000063711) #36	F2 (ENSMMUG00000019674) #37	CKAP5 (ENSMMUG00000003631)
Cercopithecinae_b	ANCESTRAL SPECIES	27	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00410000028889	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b.l #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00910000148141	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37
Olive baboon	MODERN SPECIES	3	ACCSL (ENSPANG00000016162) #10	ALKBH3 (ENSPANG00000003104) #8	EXT2 (ENSPANG00000007186) #12	ALX4 (ENSPANG00000023497) #13	CD82 (ENSPANG00000017077) #14	TSPAN18 (ENSPANG00000017380) #15	TP53I11 (ENSPANG00000016551) #16	ENSPANG00000044641	ENSPANG00000040777	PRDM11 (ENSPANG00000019134) #17	SYT13 (ENSPANG00000014366) #18	CHST1 (ENSPANG00000005033) #19	ENSPANG00000029497	SLC35C1 (ENSPANG00000046643) #20	CRY2 (ENSPANG00000013724) #21	MAPK8IP1 (ENSPANG00000018015) #22	FREY1 (ENSPANG00000011142) #23	PEX16 (ENSPANG00000005226) #24	LARGE2 (ENSPANG00000016656) #25	PHF21A (ENSPANG00000016889) #26	CREB3L1 (ENSPANG00000015384) #28	DGKZ (ENSPANG00000025617) #29	MDK (ENSPANG00000020889) #30	AMBRA1 (ENSPANG00000017260) #32	CKAP5 (ENSPANG00000013230)	F2 (ENSPANG00000016657) #37	ZNF408 (ENSPANG00000032617) #36	ARHGAP1 (ENSPANG00000012059) #35	ATG13 (ENSPANG00000006613) #34	HARBI1 (ENSPANG00000023007) #33	ENSPANG00000023598
Cercopithecinae_d	ANCESTRAL SPECIES	61	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00410000028889	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b.l #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00910000148141	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00910000147892	ENSGT00930000151062 #36
Drill	MODERN SPECIES	1384	HSD17B12 (ENSMLEG00000042493) #7	ENSMLEG00000043569	ALKBH3 (ENSMLEG00000038324) #8	ACCSL (ENSMLEG00000040591) #10	ACCS (ENSMLEG00000031788) #11	EXT2 (ENSMLEG00000028504) #12	ALX4 (ENSMLEG00000030036) #13	CD82 (ENSMLEG00000038298) #14	TSPAN18 (ENSMLEG00000033147) #15	TP53I11 (ENSMLEG00000038198) #16	PRDM11 (ENSMLEG00000006161) #17	SYT13 (ENSMLEG00000028737) #18	ENSMLEG00000037814	SLC35C1 (ENSMLEG00000038176) #20	CRY2 (ENSMLEG00000043646) #21	MAPK8IP1 (ENSMLEG00000011311) #22	FREY1 (ENSMLEG00000030295) #23	PEX16 (ENSMLEG00000036346) #24	LARGE2 (ENSMLEG00000030482) #25	PHF21A (ENSMLEG00000024105) #26	CREB3L1 (ENSMLEG00000044403) #28	DGKZ (ENSMLEG00000026419) #29	ENSMLEG00000036687 #30	CHRM4 (ENSMLEG00000007804) #31	AMBRA1 (ENSMLEG00000040418) #32	ENSMLEG00000027431	HARBI1 (ENSMLEG00000026358) #33	ATG13 (ENSMLEG00000027900) #34	ARHGAP1 (ENSMLEG00000031958) #35	ENSMLEG00000042128	ZNF408 (ENSMLEG00000044029) #36
Sooty mangabey	MODERN SPECIES	193							CD82 (ENSCATG00000012901) #14	TSPAN18 (ENSCATG00000035837) #15	TP53I11 (ENSCATG00000042615) #16	PRDM11 (ENSCATG00000014851) #17	SYT13 (ENSCATG00000029373) #18	CHST1 (ENSCATG00000014966) #19	ENSCATG00000040868	SLC35C1 (ENSCATG00000037093) #20	CRY2 (ENSCATG00000043082) #21	MAPK8IP1 (ENSCATG00000021344) #22	ENSCATG00000035926	PEX16 (ENSCATG00000038049) #24	LARGE2 (ENSCATG00000033501) #25	PHF21A (ENSCATG00000034627) #26	CREB3L1 (ENSCATG00000036131) #28	ENSCATG00000005272	DGKZ (ENSCATG00000037163) #29	MDK (ENSCATG00000042264) #30	CHRM4 (ENSCATG00000003262) #31	AMBRA1 (ENSCATG00000037285) #32	HARBI1 (ENSCATG00000043376) #33	ATG13 (ENSCATG00000038547) #34	ARHGAP1 (ENSCATG00000043789) #35	ENSCATG00000034262	ZNF408 (ENSCATG00000035814) #36
Platyrrhini	ANCESTRAL SPECIES	3	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00950000183070.a.b.g.b.a	ENSGT00940000162841.c.a #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b.n.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Cebidae	ANCESTRAL SPECIES		ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00950000183070.a.b.g.b.a	ENSGT00940000162841.c.a #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b.n.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Cebidae_a	ANCESTRAL SPECIES	10	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00950000183070.a.b.g.b.a	ENSGT00940000162841.c.a #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b.n.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Capuchin	MODERN SPECIES	58	C11orf96 (ENSCCAG00000006365) #9	ACCSL (ENSCCAG00000037654) #10	ACCS (ENSCCAG00000034085) #11	EXT2 (ENSCCAG00000033740) #12	ALX4 (ENSCCAG00000029037) #13	ENSCCAG00000020098	ENSCCAG00000030210	CD82 (ENSCCAG00000037197) #14	TSPAN18 (ENSCCAG00000025852) #15	TP53I11 (ENSCCAG00000035507) #16	PRDM11 (ENSCCAG00000028556) #17	SYT13 (ENSCCAG00000033600) #18	CHST1 (ENSCCAG00000009268) #19	SLC35C1 (ENSCCAG00000026564) #20	CRY2 (ENSCCAG00000021672) #21	MAPK8IP1 (ENSCCAG00000020551) #22	C11orf94 (ENSCCAG00000021208) #23	PEX16 (ENSCCAG00000030937) #24	LARGE2 (ENSCCAG00000022292) #25	PHF21A (ENSCCAG00000031643) #26	ENSCCAG00000032167	CREB3L1 (ENSCCAG00000036096) #28	DGKZ (ENSCCAG00000027153) #29	ENSCCAG00000030225 #30	CHRM4 (ENSCCAG00000016622) #31	AMBRA1 (ENSCCAG00000036631) #32	HARBI1 (ENSCCAG00000033538) #33	ATG13 (ENSCCAG00000033415) #34	ARHGAP1 (ENSCCAG00000005865) #35	ZNF408 (ENSCCAG00000029472) #36	F2 (ENSCCAG00000028699) #37
Bolivian squirrel monkey	MODERN SPECIES	42	ALKBH3 (ENSSBOG00000023947) #8	C11orf96 (ENSSBOG00000012454) #9	ENSSBOG00000024546	ENSSBOG00000020375 #10	ACCS (ENSSBOG00000025833) #11	EXT2 (ENSSBOG00000012532) #12	ALX4 (ENSSBOG00000032868) #13	CD82 (ENSSBOG00000029660) #14	TSPAN18 (ENSSBOG00000032945) #15	TP53I11 (ENSSBOG00000028120) #16	PRDM11 (ENSSBOG00000000613) #17	SYT13 (ENSSBOG00000026952) #18	CHST1 (ENSSBOG00000018516) #19	SLC35C1 (ENSSBOG00000031356) #20	CRY2 (ENSSBOG00000028749) #21	MAPK8IP1 (ENSSBOG00000021861) #22	FREY1 (ENSSBOG00000032977) #23	PEX16 (ENSSBOG00000001635) #24	LARGE2 (ENSSBOG00000024444) #25	PHF21A (ENSSBOG00000026213) #26	CREB3L1 (ENSSBOG00000026826) #28	DGKZ (ENSSBOG00000028666) #29	ENSSBOG00000025813	CHRM4 (ENSSBOG00000015294) #31	AMBRA1 (ENSSBOG00000021917) #32	HARBI1 (ENSSBOG00000025915) #33	ATG13 (ENSSBOG00000009657) #34	ARHGAP1 (ENSSBOG00000032970) #35	ZNF408 (ENSSBOG00000033023) #36	F2 (ENSSBOG00000020779) #37	CKAP5 (ENSSBOG00000031735)
Marmoset	MODERN SPECIES	2	HSD17B12 (ENSCJAG00000011325) #7	ALKBH3 (ENSCJAG00000011353) #8	C11orf96 (ENSCJAG00000041387) #9	ENSCJAG00000011384 #10	ACCS (ENSCJAG00000011398) #11	EXT2 (ENSCJAG00000011414) #12	ALX4 (ENSCJAG00000011438) #13	CD82 (ENSCJAG00000011453) #14	TSPAN18 (ENSCJAG00000011479) #15	TP53I11 (ENSCJAG00000011462) #16	PRDM11 (ENSCJAG00000011508) #17	SYT13 (ENSCJAG00000038216) #18	CHST1 (ENSCJAG00000011537) #19	SLC35C1 (ENSCJAG00000011547) #20	CRY2 (ENSCJAG00000011551) #21	MAPK8IP1 (ENSCJAG00000011571) #22	FREY1 (ENSCJAG00000011591) #23	PEX16 (ENSCJAG00000011594) #24	ENSCJAG00000078830	LARGE2 (ENSCJAG00000011627) #25	PHF21A (ENSCJAG00000011670) #26	ENSCJAG00000051468	CREB3L1 (ENSCJAG00000011726) #28	DGKZ (ENSCJAG00000011773) #29	ENSCJAG00000011852 #30	CHRM4 (ENSCJAG00000011861) #31	AMBRA1 (ENSCJAG00000002155) #32	HARBI1 (ENSCJAG00000046232) #33	ATG13 (ENSCJAG00000019823) #34	ARHGAP1 (ENSCJAG00000019849) #35	ZNF408 (ENSCJAG00000019859) #36
Mas night monkey	MODERN SPECIES	349	ENSANAG00000032918 #9	ENSANAG00000021583	ACCSL (ENSANAG00000038530) #10	ACCS (ENSANAG00000023624) #11	EXT2 (ENSANAG00000027569) #12	ALX4 (ENSANAG00000028117) #13	CD82 (ENSANAG00000036520) #14	TSPAN18 (ENSANAG00000027315) #15	TP53I11 (ENSANAG00000031078) #16	PRDM11 (ENSANAG00000038312) #17	SYT13 (ENSANAG00000038476) #18	ENSANAG00000000306	CHST1 (ENSANAG00000020142) #19	SLC35C1 (ENSANAG00000036877) #20	CRY2 (ENSANAG00000028154) #21	MAPK8IP1 (ENSANAG00000023346) #22	FREY1 (ENSANAG00000023251) #23	PEX16 (ENSANAG00000024741) #24	LARGE2 (ENSANAG00000024552) #25	PHF21A (ENSANAG00000033662) #26	ENSANAG00000034457	CREB3L1 (ENSANAG00000023783) #28	DGKZ (ENSANAG00000023123) #29	ENSANAG00000030861 #30	CHRM4 (ENSANAG00000007361) #31	AMBRA1 (ENSANAG00000037577) #32	HARBI1 (ENSANAG00000038532) #33	ATG13 (ENSANAG00000036615) #34	ARHGAP1 (ENSANAG00000038289) #35	ZNF408 (ENSANAG00000036294) #36	F2 (ENSANAG00000036904) #37
Tarsier	MODERN SPECIES	2515														TMEM123 (ENSTSYG00000034923)	CRY2 (ENSTSYG00000013868) #21	MAPK8IP1 (ENSTSYG00000026119) #22	CUNH11orf94 (ENSTSYG00000027069) #23	PEX16 (ENSTSYG00000031372) #24	LARGE2 (ENSTSYG00000012998) #25	PHF21A (ENSTSYG00000013029) #26
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Tree shrew	MODERN SPECIES	928																MAPK8IP1 (ENSTBEG00000014701) #22	ENSTBEG00000014869 #24	ENSTBEG00000015132 #25	PHF21A (ENSTBEG00000015434) #26
Glires	ANCESTRAL SPECIES	1	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Lagomorpha	ANCESTRAL SPECIES	4	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000164059	ENSGT00390000014757	ENSGT00940000158287	ENSGT00390000012935
Pika	MODERN SPECIES	674															ENSOPRG00000009369 #21	ENSOPRG00000009395 #22	ENSOPRG00000009435 #24
Rabbit	MODERN SPECIES		TTC17 (ENSOCUG00000014674)	HSD17B12 (ENSOCUG00000016351) #7	ALKBH3 (ENSOCUG00000016359) #8	C11orf96 (ENSOCUG00000021313) #9	ACCSL (ENSOCUG00000007146) #10	EXT2 (ENSOCUG00000007361) #12	ALX4 (ENSOCUG00000007369) #13	CD82 (ENSOCUG00000000861) #14	ENSOCUG00000023681 #15	TP53I11 (ENSOCUG00000001307) #16	PRDM11 (ENSOCUG00000027797) #17	SYT13 (ENSOCUG00000005321) #18	CHST1 (ENSOCUG00000006596) #19	SLC35C1 (ENSOCUG00000015335) #20	CRY2 (ENSOCUG00000025433) #21	ENSOCUG00000023020 #22	PEX16 (ENSOCUG00000001670) #24	LARGE2 (ENSOCUG00000001671) #25	PHF21A (ENSOCUG00000001675) #26	CREB3L1 (ENSOCUG00000004418) #28	ENSOCUG00000024752 #29	CHRM4 (ENSOCUG00000021064) #31	AMBRA1 (ENSOCUG00000016117) #32	HARBI1 (ENSOCUG00000016137) #33	ATG13 (ENSOCUG00000016144) #34	ARHGAP1 (ENSOCUG00000016160) #35	ZNF408 (ENSOCUG00000010953) #36	CKAP5 (ENSOCUG00000016200)	LRP4 (ENSOCUG00000002052)	CSTPP1 (ENSOCUG00000002066)	ENSOCUG00000002073
Rodentia	ANCESTRAL SPECIES	1	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT01100000264486	ENSGT00940000159848 #28	ENSGT00860000136066	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36
Rodentia_B	ANCESTRAL SPECIES	5	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT01100000264486	ENSGT00940000159848 #28	ENSGT00860000136066	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36
Myomorpha	ANCESTRAL SPECIES	4	ENSGT00940000154860 #7	ENSGT00940000157226.f #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00860000136066	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37
Muroidea	ANCESTRAL SPECIES	2	ENSGT00940000154860 #7	ENSGT00940000157226.f #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00860000136066	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00940000154860 #7	ENSGT00940000157226.f #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00860000136066	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37
Cricetidae	ANCESTRAL SPECIES	5	ENSGT00940000154860 #7	ENSGT00940000157226.f #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00860000136066	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37
Cricetidae_B	ANCESTRAL SPECIES	34	ENSGT00940000154860 #7	ENSGT00940000157226.f #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Northern American deer mouse	MODERN SPECIES	17	Hsd17b12 (ENSPEMG00000019400) #7	Alkbh3 (ENSPEMG00000019372) #8	Gm13889 (ENSPEMG00000025209) #9	Accs (ENSPEMG00000016421) #11	Ext2 (ENSPEMG00000022691) #12	Alx4 (ENSPEMG00000022456) #13	Cd82 (ENSPEMG00000014649) #14	Tspan18 (ENSPEMG00000028780) #15	Trp53i11 (ENSPEMG00000028703) #16	ENSPEMG00000031347 #17	ENSPEMG00000025900	Syt13 (ENSPEMG00000000686) #18	Chst1 (ENSPEMG00000023266) #19	Slc35c1 (ENSPEMG00000027919) #20	Cry2 (ENSPEMG00000018313) #21	Mapk8ip1 (ENSPEMG00000019088) #22	Frey1 (ENSPEMG00000018435) #23	Pex16 (ENSPEMG00000008055) #24	Large2 (ENSPEMG00000013026) #25	Phf21a (ENSPEMG00000004446) #26	Creb3l1 (ENSPEMG00000019031) #28	Dgkz (ENSPEMG00000009628) #29	Mdk (ENSPEMG00000014123) #30	Chrm4 (ENSPEMG00000028345) #31	Ambra1 (ENSPEMG00000005111) #32	ENSPEMG00000025318	Harbi1 (ENSPEMG00000013606) #33	Atg13 (ENSPEMG00000017021) #34	Arhgap1 (ENSPEMG00000011370) #35	Zfp408 (ENSPEMG00000016757) #36	F2 (ENSPEMG00000018118) #37
Prairie vole	MODERN SPECIES	81	Alkbh3 (ENSMOCG00000012816) #8	ENSMOCG00000010059 #9	Accsl (ENSMOCG00000009949) #10	Accs (ENSMOCG00000015335) #11	Ext2 (ENSMOCG00000018938) #12	Alx4 (ENSMOCG00000004542) #13	Cd82 (ENSMOCG00000016145) #14	Tspan18 (ENSMOCG00000022221) #15	Trp53i11 (ENSMOCG00000022849) #16	ENSMOCG00000019982 #17	Syt13 (ENSMOCG00000013286) #18	Chst1 (ENSMOCG00000013785) #19	ENSMOCG00000015940	Slc35c1 (ENSMOCG00000000842) #20	ENSMOCG00000001841 #21	Mapk8ip1 (ENSMOCG00000007285) #22	Frey1 (ENSMOCG00000012907) #23	Pex16 (ENSMOCG00000015385) #24	Large2 (ENSMOCG00000004366) #25	Phf21a (ENSMOCG00000018126) #26	Creb3l1 (ENSMOCG00000012802) #28	Dgkz (ENSMOCG00000000694) #29	Mdk (ENSMOCG00000014474) #30	Chrm4 (ENSMOCG00000016103) #31	Ambra1 (ENSMOCG00000018792) #32	ENSMOCG00000007253	Atg13 (ENSMOCG00000018209) #34	Arhgap1 (ENSMOCG00000008533) #35	F2 (ENSMOCG00000019585) #37	Ckap5 (ENSMOCG00000022214)	Lrp4 (ENSMOCG00000005823)
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00390000006196	ENSGT00940000154860 #7	ENSGT00940000157226.f #8	ENSGT00390000016821 #9	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00860000136066	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37
Golden Hamster	MODERN SPECIES	618	ENSMAUG00000008950	Ttc17 (ENSMAUG00000010822)	Hsd17b12 (ENSMAUG00000011836) #7	Alkbh3 (ENSMAUG00000009317) #8	ENSMAUG00000010918 #9	Accs (ENSMAUG00000007912) #11	Ext2 (ENSMAUG00000009741) #12	Alx4 (ENSMAUG00000002663) #13	Cd82 (ENSMAUG00000003346) #14	Tspan18 (ENSMAUG00000003687) #15	Trp53i11 (ENSMAUG00000010266) #16	ENSMAUG00000010059 #17	Syt13 (ENSMAUG00000013295) #18	Chst1 (ENSMAUG00000011799) #19	Cry2 (ENSMAUG00000004486) #21	Mapk8ip1 (ENSMAUG00000005802) #22	Frey1 (ENSMAUG00000006630) #23	Pex16 (ENSMAUG00000011878) #24	Large2 (ENSMAUG00000008548) #25	Phf21a (ENSMAUG00000011351) #26	Creb3l1 (ENSMAUG00000003224) #28	Dgkz (ENSMAUG00000008433) #29	Mdk (ENSMAUG00000006759) #30	Chrm4 (ENSMAUG00000007510) #31	Ambra1 (ENSMAUG00000008821) #32	Harbi1 (ENSMAUG00000012193) #33	Atg13 (ENSMAUG00000011052) #34	Arhgap1 (ENSMAUG00000012048) #35	F2 (ENSMAUG00000009414) #37	Ckap5 (ENSMAUG00000012944)	Lrp4 (ENSMAUG00000016435)
Chinese hamster chok1gshd	MODERN SPECIES	188	Ttc17 (ENSCGRG00001008891)	Hsd17b12 (ENSCGRG00001024805) #7	Alkbh3 (ENSCGRG00001014489) #8	Gm13889 (ENSCGRG00001015067) #9	Accs (ENSCGRG00001017403) #11	Ext2 (ENSCGRG00001018610) #12	Alx4 (ENSCGRG00001013158) #13	Cd82 (ENSCGRG00001014213) #14	Tspan18 (ENSCGRG00001014966) #15	Trp53i11 (ENSCGRG00001015881) #16	ENSCGRG00001016971 #17	Syt13 (ENSCGRG00001017740) #18	Chst1 (ENSCGRG00001010952) #19	Slc35c1 (ENSCGRG00001019726) #20	Cry2 (ENSCGRG00001020400) #21	Mapk8ip1 (ENSCGRG00001016399) #22	Frey1 (ENSCGRG00001017596) #23	Pex16 (ENSCGRG00001024899) #24	Large2 (ENSCGRG00001001247) #25	Phf21a (ENSCGRG00001007974) #26	Creb3l1 (ENSCGRG00001011598) #28	Dgkz (ENSCGRG00001021082) #29	ENSCGRG00001011874	Mdk (ENSCGRG00001022566) #30	Chrm4 (ENSCGRG00001012019) #31	Ambra1 (ENSCGRG00001020313) #32	Harbi1 (ENSCGRG00001021313) #33	Atg13 (ENSCGRG00001022112) #34	ENSCGRG00001022859	Arhgap1 (ENSCGRG00001023260) #35	Zfp408 (ENSCGRG00001023588) #36
Murinae	ANCESTRAL SPECIES	1	ENSGT00940000154860 #7	ENSGT00940000157226.f #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00860000136066	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37
Mus	ANCESTRAL SPECIES	1	ENSGT00940000157226.e #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00860000136063	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00860000136066	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37
Mus_A	ANCESTRAL SPECIES		ENSGT00940000157226.e #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00860000136063	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00860000136066	ENSGT00940000156152 #29	ENSGT00390000007640.b.g #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37
Mus_B	ANCESTRAL SPECIES	1	ENSGT00940000157226.e #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00860000136063	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00860000136066	ENSGT00940000156152 #29	ENSGT00390000007640.b.g #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37
Mus_C	ANCESTRAL SPECIES		ENSGT00940000157226.e #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00860000136063	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00860000136066	ENSGT00940000156152 #29	ENSGT00390000007640.b.g #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37
spretus	MODERN SPECIES	11	MGP_SPRETEiJ_G0024904 #8	Gm13889 (MGP_SPRETEiJ_G0024903) #9	Accsl (MGP_SPRETEiJ_G0024902) #10	Accs (MGP_SPRETEiJ_G0024901) #11	Ext2 (MGP_SPRETEiJ_G0024900) #12	Alx4 (MGP_SPRETEiJ_G0024899) #13	MGP_SPRETEiJ_G0024898	Cd82 (MGP_SPRETEiJ_G0024897) #14	Tspan18 (MGP_SPRETEiJ_G0024896) #15	Trp53i11 (MGP_SPRETEiJ_G0024895) #16	MGP_SPRETEiJ_G0024894 #17	Syt13 (MGP_SPRETEiJ_G0024893) #18	Chst1 (MGP_SPRETEiJ_G0024892) #19	Slc35c1 (MGP_SPRETEiJ_G0024891) #20	Cry2 (MGP_SPRETEiJ_G0024890) #21	Mapk8ip1 (MGP_SPRETEiJ_G0024889) #22	Frey1 (MGP_SPRETEiJ_G0024888) #23	Pex16 (MGP_SPRETEiJ_G0024887) #24	Large2 (MGP_SPRETEiJ_G0024886) #25	Phf21a (MGP_SPRETEiJ_G0024885) #26	Creb3l1 (MGP_SPRETEiJ_G0024884) #28	MGP_SPRETEiJ_G0024883	Dgkz (MGP_SPRETEiJ_G0024882) #29	Mdk (MGP_SPRETEiJ_G0024881) #30	Chrm4 (MGP_SPRETEiJ_G0024880) #31	Ambra1 (MGP_SPRETEiJ_G0024879) #32	Harbi1 (MGP_SPRETEiJ_G0024878) #33	Atg13 (MGP_SPRETEiJ_G0024877) #34	Arhgap1 (MGP_SPRETEiJ_G0024876) #35	Zfp408 (MGP_SPRETEiJ_G0024875) #36	F2 (MGP_SPRETEiJ_G0024874) #37
Steppe mouse	MODERN SPECIES	36	Accsl (ENSMSIG00000018045) #10	Ext2 (ENSMSIG00000018155) #12	Alx4 (ENSMSIG00000018194) #13	ENSMSIG00000018210	ENSMSIG00000018226	Cd82 (ENSMSIG00000018232) #14	Tspan18 (ENSMSIG00000018260) #15	ENSMSIG00000018279 #16	Prdm11 (ENSMSIG00000018308) #17	ENSMSIG00000018406	Syt13 (ENSMSIG00000018415) #18	Chst1 (ENSMSIG00000018432) #19	ENSMSIG00000018438	Slc35c1 (ENSMSIG00000018455) #20	Cry2 (ENSMSIG00000018499) #21	Mapk8ip1 (ENSMSIG00000018534) #22	Frey1 (ENSMSIG00000018641) #23	Pex16 (ENSMSIG00000018650) #24	Large2 (ENSMSIG00000018698) #25	Phf21a (ENSMSIG00000018990) #26	Creb3l1 (ENSMSIG00000019325) #28	Dgkz (ENSMSIG00000019366) #29	ENSMSIG00000019782	Mdk (ENSMSIG00000019785) #30	Chrm4 (ENSMSIG00000019816) #31	Ambra1 (ENSMSIG00000019820) #32	Harbi1 (ENSMSIG00000019911) #33	Atg13 (ENSMSIG00000019915) #34	Arhgap1 (ENSMSIG00000020000) #35	Zfp408 (ENSMSIG00000020068) #36	F2 (ENSMSIG00000020083) #37
Mouse	MODERN SPECIES	11	Alkbh3 (ENSMUSG00000040174) #8	Gm27027 (ENSMUSG00000098004)	Gm13889 (ENSMUSG00000087006) #9	Accsl (ENSMUSG00000075023) #10	Accs (ENSMUSG00000040272) #11	Ext2 (ENSMUSG00000027198) #12	Alx4 (ENSMUSG00000040310) #13	Cd82 (ENSMUSG00000027215) #14	Tspan18 (ENSMUSG00000027217) #15	Trp53i11 (ENSMUSG00000068735) #16	Prdm11 (ENSMUSG00000075028) #17	Syt13 (ENSMUSG00000027220) #18	Chst1 (ENSMUSG00000027221) #19	Slc35c1 (ENSMUSG00000049922) #20	Cry2 (ENSMUSG00000068742) #21	Mapk8ip1 (ENSMUSG00000027223) #22	Frey1 (ENSMUSG00000044916) #23	Pex16 (ENSMUSG00000027222) #24	Large2 (ENSMUSG00000040434) #25	Phf21a (ENSMUSG00000058318) #26	Creb3l1 (ENSMUSG00000027230) #28	Dgkz (ENSMUSG00000040479) #29	Mdk (ENSMUSG00000027239) #30	Chrm4 (ENSMUSG00000040495) #31	Ambra1 (ENSMUSG00000040506) #32	Harbi1 (ENSMUSG00000027243) #33	Atg13 (ENSMUSG00000027244) #34	Arhgap1 (ENSMUSG00000027247) #35	Zfp408 (ENSMUSG00000075040) #36	F2 (ENSMUSG00000027249) #37	Ckap5 (ENSMUSG00000040549)
Ryukyu mouse	MODERN SPECIES	11	MGP_CAROLIEiJ_G0023994 #8	Gm13889 (MGP_CAROLIEiJ_G0023993) #9	MGP_CAROLIEiJ_G0023992 #10	Accs (MGP_CAROLIEiJ_G0023991) #11	Ext2 (MGP_CAROLIEiJ_G0023990) #12	Alx4 (MGP_CAROLIEiJ_G0023989) #13	MGP_CAROLIEiJ_G0023988	Cd82 (MGP_CAROLIEiJ_G0023987) #14	Tspan18 (MGP_CAROLIEiJ_G0023986) #15	MGP_CAROLIEiJ_G0023985 #16	MGP_CAROLIEiJ_G0023984 #17	Syt13 (MGP_CAROLIEiJ_G0023983) #18	Chst1 (MGP_CAROLIEiJ_G0023982) #19	Slc35c1 (MGP_CAROLIEiJ_G0023981) #20	Cry2 (MGP_CAROLIEiJ_G0023980) #21	Mapk8ip1 (MGP_CAROLIEiJ_G0023979) #22	Frey1 (MGP_CAROLIEiJ_G0023978) #23	Pex16 (MGP_CAROLIEiJ_G0023977) #24	Large2 (MGP_CAROLIEiJ_G0023976) #25	Phf21a (MGP_CAROLIEiJ_G0023975) #26	Creb3l1 (MGP_CAROLIEiJ_G0023974) #28	MGP_CAROLIEiJ_G0023973	Dgkz (MGP_CAROLIEiJ_G0023972) #29	Mdk (MGP_CAROLIEiJ_G0023971) #30	Chrm4 (MGP_CAROLIEiJ_G0023970) #31	Ambra1 (MGP_CAROLIEiJ_G0023969) #32	Harbi1 (MGP_CAROLIEiJ_G0023968) #33	Atg13 (MGP_CAROLIEiJ_G0023967) #34	Arhgap1 (MGP_CAROLIEiJ_G0023966) #35	Zfp408 (MGP_CAROLIEiJ_G0023965) #36	F2 (MGP_CAROLIEiJ_G0023964) #37
Shrew mouse	MODERN SPECIES	16	Alkbh3 (MGP_PahariEiJ_G0025431) #8	MGP_PahariEiJ_G0025430 #8	Gm13889 (MGP_PahariEiJ_G0025429) #9	Accsl (MGP_PahariEiJ_G0025428) #10	Accs (MGP_PahariEiJ_G0025427) #11	Ext2 (MGP_PahariEiJ_G0025426) #12	Alx4 (MGP_PahariEiJ_G0025425) #13	MGP_PahariEiJ_G0025424	Cd82 (MGP_PahariEiJ_G0025423) #14	Tspan18 (MGP_PahariEiJ_G0025422) #15	Trp53i11 (MGP_PahariEiJ_G0025421) #16	MGP_PahariEiJ_G0025420 #17	Syt13 (MGP_PahariEiJ_G0025419) #18	Chst1 (MGP_PahariEiJ_G0025418) #19	Cry2 (MGP_PahariEiJ_G0025417) #21	Mapk8ip1 (MGP_PahariEiJ_G0025416) #22	Frey1 (MGP_PahariEiJ_G0025415) #23	Pex16 (MGP_PahariEiJ_G0025414) #24	Large2 (MGP_PahariEiJ_G0025413) #25	Phf21a (MGP_PahariEiJ_G0025412) #26	Creb3l1 (MGP_PahariEiJ_G0025411) #28	MGP_PahariEiJ_G0025410	Dgkz (MGP_PahariEiJ_G0025409) #29	Mdk (MGP_PahariEiJ_G0025408) #30	Chrm4 (MGP_PahariEiJ_G0025407) #31	Ambra1 (MGP_PahariEiJ_G0025406) #32	Harbi1 (MGP_PahariEiJ_G0025405) #33	Atg13 (MGP_PahariEiJ_G0025404) #34	Arhgap1 (MGP_PahariEiJ_G0025403) #35	Zfp408 (MGP_PahariEiJ_G0025402) #36	F2 (MGP_PahariEiJ_G0025401) #37
Rat	MODERN SPECIES	13	Alkbh3 (ENSRNOG00000021678) #8	RGD1564664 (ENSRNOG00000055564) #9	Accsl (ENSRNOG00000042533) #10	Accs (ENSRNOG00000009199) #11	Ext2 (ENSRNOG00000008944) #12	Alx4 (ENSRNOG00000000008) #13	Cd82 (ENSRNOG00000000047) #14	Tspan18 (ENSRNOG00000008758) #15	Tp53i11 (ENSRNOG00000008738) #16	ENSRNOG00000068495	Prdm11 (ENSRNOG00000008674) #17	Syt13 (ENSRNOG00000008000) #18	Chst1 (ENSRNOG00000007989) #19	Slc35c1 (ENSRNOG00000007732) #20	Cry2 (ENSRNOG00000007478) #21	Mapk8ip1 (ENSRNOG00000058478) #22	Frey1 (ENSRNOG00000006884) #23	Pex16 (ENSRNOG00000006539) #24	Large2 (ENSRNOG00000006353) #25	Phf21a (ENSRNOG00000006063) #26	Creb3l1 (ENSRNOG00000005413) #28	Dgkz (ENSRNOG00000017737) #29	Mdk (ENSRNOG00000017560) #30	Chrm4 (ENSRNOG00000017556) #31	Ambra1 (ENSRNOG00000017422) #32	Atg13 (ENSRNOG00000016984) #34	Arhgap1 (ENSRNOG00000016610) #35	ENSRNOG00000070459 #36	F2 (ENSRNOG00000016325) #37	Ckap5 (ENSRNOG00000016067)	Lrp4 (ENSRNOG00000015285)
Upper Galilee mountains blind mole rat	MODERN SPECIES	871														Slc35c1 (ENSNGAG00000000960) #20	Cry2 (ENSNGAG00000002383) #21	Mapk8ip1 (ENSNGAG00000011626) #22	Frey1 (ENSNGAG00000016997) #23	Pex16 (ENSNGAG00000020802) #24	Large2 (ENSNGAG00000019218) #25	Phf21a (ENSNGAG00000014772) #26
Lesser Egyptian jerboa	MODERN SPECIES	62	0610010K14Rik (ENSJJAG00000018786)	Rnasek (ENSJJAG00000018322)	Alox12 (ENSJJAG00000000399)	ENSJJAG00000008060	Pelp1 (ENSJJAG00000013033)	Ext2 (ENSJJAG00000003668) #12	Alx4 (ENSJJAG00000014358) #13	Cd82 (ENSJJAG00000010666) #14	Tspan18 (ENSJJAG00000009258) #15	Trp53i11 (ENSJJAG00000010306) #16	ENSJJAG00000020448 #17	Syt13 (ENSJJAG00000015391) #18	Chst1 (ENSJJAG00000009883) #19	Slc35c1 (ENSJJAG00000024143) #20	Cry2 (ENSJJAG00000023774) #21	Mapk8ip1 (ENSJJAG00000006389) #22	Frey1 (ENSJJAG00000020049) #23	Pex16 (ENSJJAG00000022973) #24	Large2 (ENSJJAG00000015799) #25	Phf21a (ENSJJAG00000016994) #26	Creb3l1 (ENSJJAG00000014152) #28	Dgkz (ENSJJAG00000003197) #29	Mdk (ENSJJAG00000023305) #30	Chrm4 (ENSJJAG00000010466) #31	Ambra1 (ENSJJAG00000004138) #32	ENSJJAG00000016975	ENSJJAG00000015195	Atg13 (ENSJJAG00000024173) #34	Arhgap1 (ENSJJAG00000022610) #35	Zfp408 (ENSJJAG00000015381) #36	F2 (ENSJJAG00000005619) #37
Kangaroo rat	MODERN SPECIES	444	Ttc17 (ENSDORG00000002398)	ENSDORG00000004834 #7	Alkbh3 (ENSDORG00000000083) #8	ENSDORG00000004336 #9	Accs (ENSDORG00000005063) #11	Ext2 (ENSDORG00000012848) #12	Alx4 (ENSDORG00000014002) #13	Cd82 (ENSDORG00000029810) #14	Tspan18 (ENSDORG00000004841) #15	Trp53i11 (ENSDORG00000024778) #16	ENSDORG00000029092 #17	Syt13 (ENSDORG00000005470) #18	Chst1 (ENSDORG00000025502) #19	Slc35c1 (ENSDORG00000027177) #20	Cry2 (ENSDORG00000015496) #21	Mapk8ip1 (ENSDORG00000015499) #22	Frey1 (ENSDORG00000024564) #23	Pex16 (ENSDORG00000015504) #24	Large2 (ENSDORG00000015507) #25	Phf21a (ENSDORG00000015508) #26	ENSDORG00000025559	Creb3l1 (ENSDORG00000023541) #28	ENSDORG00000028371	Dgkz (ENSDORG00000008377) #29	Mdk (ENSDORG00000029447) #30	Chrm4 (ENSDORG00000024984) #31	Ambra1 (ENSDORG00000008382) #32	ENSDORG00000028941	Atg13 (ENSDORG00000000382) #34	Arhgap1 (ENSDORG00000000385) #35	Zfp408 (ENSDORG00000000387) #36
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00860000136066	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37
Hystricomorpha	ANCESTRAL SPECIES	16	ENSGT00390000006196	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00860000136066	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00940000154234.b #37	ENSGT00390000014757
Hystricomorpha_a	ANCESTRAL SPECIES	12	ENSGT00390000006196	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00860000136066	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00940000154234.b #37	ENSGT00390000014757
Hystricomorpha_b	ANCESTRAL SPECIES	10	ENSGT00390000006196	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00860000136066	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00940000154234.b #37	ENSGT00390000014757
Long-tailed chinchilla	MODERN SPECIES	129	TTC17 (ENSCLAG00000012857)	HSD17B12 (ENSCLAG00000016216) #7	ALKBH3 (ENSCLAG00000016579) #8	C11orf96 (ENSCLAG00000018096) #9	EXT2 (ENSCLAG00000014428) #12	ALX4 (ENSCLAG00000013928) #13	CD82 (ENSCLAG00000013557) #14	TSPAN18 (ENSCLAG00000013370) #15	TP53I11 (ENSCLAG00000013412) #16	PRDM11 (ENSCLAG00000015369) #17	SYT13 (ENSCLAG00000014302) #18	CHST1 (ENSCLAG00000013459) #19	SLC35C1 (ENSCLAG00000013258) #20	CRY2 (ENSCLAG00000014719) #21	ENSCLAG00000014881	MAPK8IP1 (ENSCLAG00000014552) #22	PEX16 (ENSCLAG00000013695) #24	LARGE2 (ENSCLAG00000014846) #25	PHF21A (ENSCLAG00000016632) #26	CREB3L1 (ENSCLAG00000013609) #28	ENSCLAG00000014194	DGKZ (ENSCLAG00000016057) #29	MDK (ENSCLAG00000014462) #30	CHRM4 (ENSCLAG00000013251) #31	AMBRA1 (ENSCLAG00000015156) #32	HARBI1 (ENSCLAG00000013578) #33	ATG13 (ENSCLAG00000015328) #34	ARHGAP1 (ENSCLAG00000013542) #35	F2 (ENSCLAG00000015618) #37	CKAP5 (ENSCLAG00000015801)	LRP4 (ENSCLAG00000016159)
Degu	MODERN SPECIES	59	ENSODEG00000020538	ACCS (ENSODEG00000016512) #11	EXT2 (ENSODEG00000016764) #12	ALX4 (ENSODEG00000016139) #13	ENSODEG00000016065	ENSODEG00000020356	ENSODEG00000016115 #14	TSPAN18 (ENSODEG00000016609) #15	TP53I11 (ENSODEG00000016164) #16	ENSODEG00000015982	PRDM11 (ENSODEG00000016043) #17	SYT13 (ENSODEG00000016104) #18	CHST1 (ENSODEG00000020411) #19	SLC35C1 (ENSODEG00000016358) #20	CRY2 (ENSODEG00000016685) #21	MAPK8IP1 (ENSODEG00000016178) #22	FREY1 (ENSODEG00000016189) #23	PEX16 (ENSODEG00000016153) #24	LARGE2 (ENSODEG00000016208) #25	PHF21A (ENSODEG00000017531) #26	ENSODEG00000016543	ENSODEG00000016348	CREB3L1 (ENSODEG00000016017) #28	ENSODEG00000016039	ENSODEG00000016420 #29	DGKZ (ENSODEG00000016309) #29	MDK (ENSODEG00000015931) #30	CHRM4 (ENSODEG00000020352) #31	AMBRA1 (ENSODEG00000016633) #32	ENSODEG00000016339	ATG13 (ENSODEG00000017294) #34
Guinea pig	MODERN SPECIES	72	TTC17 (ENSCPOG00000013524)	HSD17B12 (ENSCPOG00000031159) #7	ALKBH3 (ENSCPOG00000005138) #8	C11orf96 (ENSCPOG00000027092) #9	ACCS (ENSCPOG00000011925) #11	EXT2 (ENSCPOG00000011931) #12	ALX4 (ENSCPOG00000022496) #13	CD82 (ENSCPOG00000026415) #14	TSPAN18 (ENSCPOG00000001959) #15	TP53I11 (ENSCPOG00000038980) #16	PRDM11 (ENSCPOG00000019447) #17	SYT13 (ENSCPOG00000008033) #18	CHST1 (ENSCPOG00000037376) #19	SLC35C1 (ENSCPOG00000037302) #20	CRY2 (ENSCPOG00000001296) #21	MAPK8IP1 (ENSCPOG00000001298) #22	FREY1 (ENSCPOG00000032012) #23	PEX16 (ENSCPOG00000027497) #24	LARGE2 (ENSCPOG00000033339) #25	PHF21A (ENSCPOG00000001299) #26	CREB3L1 (ENSCPOG00000010073) #28	DGKZ (ENSCPOG00000009636) #29	MDK (ENSCPOG00000007340) #30	CHRM4 (ENSCPOG00000020788) #31	AMBRA1 (ENSCPOG00000007341) #32	HARBI1 (ENSCPOG00000037304) #33	ATG13 (ENSCPOG00000013042) #34	ARHGAP1 (ENSCPOG00000013046) #35	F2 (ENSCPOG00000026682) #37	CKAP5 (ENSCPOG00000007054)	LRP4 (ENSCPOG00000007072)
Sciuridae	ANCESTRAL SPECIES	2	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Marmotini	ANCESTRAL SPECIES	22	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Marmotini_b	ANCESTRAL SPECIES	23	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Arctic ground squirrel	MODERN SPECIES	208						EXT2 (ENSUPAG00010008690) #12	ALX4 (ENSUPAG00010008717) #13	CD82 (ENSUPAG00010008728) #14	TSPAN18 (ENSUPAG00010008743) #15	TP53I11 (ENSUPAG00010008764) #16	ENSUPAG00010008787 #17	SYT13 (ENSUPAG00010008795) #18	CHST1 (ENSUPAG00010008807) #19	SLC35C1 (ENSUPAG00010008815) #20	CRY2 (ENSUPAG00010008829) #21	MAPK8IP1 (ENSUPAG00010008856) #22	FREY1 (ENSUPAG00010008915) #23	PEX16 (ENSUPAG00010008926) #24	LARGE2 (ENSUPAG00010008955) #25	PHF21A (ENSUPAG00010009105) #26	CREB3L1 (ENSUPAG00010010194) #28	DGKZ (ENSUPAG00010010211) #29	MDK (ENSUPAG00010010379) #30	CHRM4 (ENSUPAG00010010417) #31	AMBRA1 (ENSUPAG00010010430) #32	HARBI1 (ENSUPAG00010010611) #33	ATG13 (ENSUPAG00010010621) #34	ARHGAP1 (ENSUPAG00010010696) #35	ZNF408 (ENSUPAG00010010704) #36	F2 (ENSUPAG00010010714) #37	CKAP5 (ENSUPAG00010010730)
Squirrel	MODERN SPECIES	162	C11orf96 (ENSSTOG00000030620) #9	ACCSL (ENSSTOG00000001158) #10	ENSSTOG00000033284 #11	ENSSTOG00000004449 #11	EXT2 (ENSSTOG00000004480) #12	ALX4 (ENSSTOG00000029078) #13	ENSSTOG00000023731 #14	TSPAN18 (ENSSTOG00000012343) #15	TP53I11 (ENSSTOG00000025635) #16	PRDM11 (ENSSTOG00000021186) #17	SYT13 (ENSSTOG00000004017) #18	CHST1 (ENSSTOG00000016359) #19	SLC35C1 (ENSSTOG00000022825) #20	CRY2 (ENSSTOG00000011521) #21	FREY1 (ENSSTOG00000027622) #23	MAPK8IP1 (ENSSTOG00000027362) #22	PEX16 (ENSSTOG00000011534) #24	LARGE2 (ENSSTOG00000011545) #25	PHF21A (ENSSTOG00000011552) #26	CREB3L1 (ENSSTOG00000012697) #28	DGKZ (ENSSTOG00000012704) #29	MDK (ENSSTOG00000027636) #30	CHRM4 (ENSSTOG00000022455) #31	AMBRA1 (ENSSTOG00000019411) #32	HARBI1 (ENSSTOG00000005072) #33	ATG13 (ENSSTOG00000005077) #34	ARHGAP1 (ENSSTOG00000026557) #35	ZNF408 (ENSSTOG00000005114) #36	F2 (ENSSTOG00000005130) #37	CKAP5 (ENSSTOG00000005158)	LRP4 (ENSSTOG00000005236)
Alpin marmot	MODERN SPECIES	3	ALKBH3 (ENSMMMG00000011630) #8	C11orf96 (ENSMMMG00000011645) #9	ACCSL (ENSMMMG00000011649) #10	ENSMMMG00000011721	ACCS (ENSMMMG00000011728) #11	EXT2 (ENSMMMG00000011786) #12	ALX4 (ENSMMMG00000011816) #13	ENSMMMG00000011823	TSPAN18 (ENSMMMG00000011835) #15	TP53I11 (ENSMMMG00000011860) #16	PRDM11 (ENSMMMG00000011883) #17	SYT13 (ENSMMMG00000011892) #18	CHST1 (ENSMMMG00000011917) #19	SLC35C1 (ENSMMMG00000011928) #20	CRY2 (ENSMMMG00000011931) #21	MAPK8IP1 (ENSMMMG00000011982) #22	FREY1 (ENSMMMG00000012302) #23	PEX16 (ENSMMMG00000012310) #24	LARGE2 (ENSMMMG00000012317) #25	PHF21A (ENSMMMG00000012404) #26	CREB3L1 (ENSMMMG00000013137) #28	DGKZ (ENSMMMG00000013155) #29	MDK (ENSMMMG00000013259) #30	CHRM4 (ENSMMMG00000013278) #31	AMBRA1 (ENSMMMG00000013284) #32	HARBI1 (ENSMMMG00000013860) #33	ATG13 (ENSMMMG00000013875) #34	ARHGAP1 (ENSMMMG00000013934) #35	ZNF408 (ENSMMMG00000013944) #36	F2 (ENSMMMG00000013961) #37	CKAP5 (ENSMMMG00000013993)
Eurasian red squirrel	MODERN SPECIES	2	ALKBH3 (ENSSVLG00005018027) #8	C11orf96 (ENSSVLG00005018003) #9	ACCSL (ENSSVLG00005017862) #10	ACCS (ENSSVLG00005017673) #11	EXT2 (ENSSVLG00005017472) #12	ALX4 (ENSSVLG00005017428) #13	ENSSVLG00005017405	CD82 (ENSSVLG00005017346) #14	TSPAN18 (ENSSVLG00005017248) #15	TP53I11 (ENSSVLG00005017174) #16	PRDM11 (ENSSVLG00005017126) #17	SYT13 (ENSSVLG00005017054) #18	CHST1 (ENSSVLG00005017036) #19	SLC35C1 (ENSSVLG00005016968) #20	CRY2 (ENSSVLG00005016727) #21	MAPK8IP1 (ENSSVLG00005016511) #22	FREY1 (ENSSVLG00005016461) #23	PEX16 (ENSSVLG00005016392) #24	LARGE2 (ENSSVLG00005016132) #25	PHF21A (ENSSVLG00005016012) #26	CREB3L1 (ENSSVLG00005015955) #28	ENSSVLG00005015926	DGKZ (ENSSVLG00005015887) #29	MDK (ENSSVLG00005015782) #30	CHRM4 (ENSSVLG00005015740) #31	AMBRA1 (ENSSVLG00005015569) #32	HARBI1 (ENSSVLG00005015510) #33	ENSSVLG00005014869 #34	ARHGAP1 (ENSSVLG00005014685) #35	F2 (ENSSVLG00005014116) #37	CKAP5 (ENSSVLG00005013939)
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00930000151992	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00910000148141	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37
Eulipotyphla	ANCESTRAL SPECIES	1304																ENSGT00940000157089.B #22	ENSGT00390000017790 #24
Common shrew	MODERN SPECIES	1586																MAPK8IP1 (ENSSARG00000008512) #22	ENSSARG00000008579 #24
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00930000151992	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00910000148141	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00930000151992	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Suina	ANCESTRAL SPECIES	34	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Chacoan peccary	MODERN SPECIES	919	HSD17B12 (ENSCWAG00000021466) #7	ALKBH3 (ENSCWAG00000021459) #8	C11orf96 (ENSCWAG00000021454) #9	ACCSL (ENSCWAG00000021443) #10	ACCS (ENSCWAG00000021431) #11	EXT2 (ENSCWAG00000021417) #12	ALX4 (ENSCWAG00000021413) #13	CD82 (ENSCWAG00000021401) #14	TSPAN18 (ENSCWAG00000021388) #15	TP53I11 (ENSCWAG00000021382) #16	PRDM11 (ENSCWAG00000021374) #17	SYT13 (ENSCWAG00000021365) #18	CHST1 (ENSCWAG00000021361) #19	SLC35C1 (ENSCWAG00000021357) #20	CRY2 (ENSCWAG00000021334) #21	MAPK8IP1 (ENSCWAG00000021296) #22	FREY1 (ENSCWAG00000021286) #23	PEX16 (ENSCWAG00000021270) #24	LARGE2 (ENSCWAG00000021255) #25	PHF21A (ENSCWAG00000021231) #26	CREB3L1 (ENSCWAG00000021208) #28	DGKZ (ENSCWAG00000020966) #29	MDK (ENSCWAG00000020882) #30	CHRM4 (ENSCWAG00000020869) #31	AMBRA1 (ENSCWAG00000020799) #32	HARBI1 (ENSCWAG00000020778) #33	ATG13 (ENSCWAG00000020671) #34	ARHGAP1 (ENSCWAG00000020638) #35	ZNF408 (ENSCWAG00000020629) #36	F2 (ENSCWAG00000020586) #37	CKAP5 (ENSCWAG00000020545)
Pig	MODERN SPECIES	10	HSD17B12 (ENSSSCG00000021739) #7	ALKBH3 (ENSSSCG00000040937) #8	ACCSL (ENSSSCG00000057793) #10	ACCS (ENSSSCG00000013282) #11	ENSSSCG00000013281 #12	ENSSSCG00000061941 #12	ALX4 (ENSSSCG00000040329) #13	CD82 (ENSSSCG00000029521) #14	TSPAN18 (ENSSSCG00000013278) #15	TP53I11 (ENSSSCG00000031819) #16	PRDM11 (ENSSSCG00000013276) #17	SYT13 (ENSSSCG00000031590) #18	CHST1 (ENSSSCG00000013273) #19	SLC35C1 (ENSSSCG00000025647) #20	CRY2 (ENSSSCG00000013270) #21	MAPK8IP1 (ENSSSCG00000013269) #22	FREY1 (ENSSSCG00000056689) #23	PEX16 (ENSSSCG00000013267) #24	LARGE2 (ENSSSCG00000013266) #25	ENSSSCG00000049982	PHF21A (ENSSSCG00000023974) #26	CREB3L1 (ENSSSCG00000013263) #28	DGKZ (ENSSSCG00000013259) #29	MDK (ENSSSCG00000013260) #30	CHRM4 (ENSSSCG00000013261) #31	AMBRA1 (ENSSSCG00000013262) #32	HARBI1 (ENSSSCG00000013258) #33	ATG13 (ENSSSCG00000013257) #34	ARHGAP1 (ENSSSCG00000013256) #35	ZNF408 (ENSSSCG00000023097) #36	F2 (ENSSSCG00000013252) #37
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00930000151992	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT00390000016821 #9	ENSGT00910000148817	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00930000151992	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Cetacea	ANCESTRAL SPECIES	4	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00930000151992	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Odontoceti	ANCESTRAL SPECIES	4	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00910000148817	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Dolphin	MODERN SPECIES	2774														SLC35C1 (ENSTTRG00000001039) #20	CRY2 (ENSTTRG00000001040) #21	MAPK8IP1 (ENSTTRG00000001041) #22	PEX16 (ENSTTRG00000001043) #24	LARGE2 (ENSTTRG00000001044) #25	PHF21A (ENSTTRG00000001045) #26
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00910000148817	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Monodontidae	ANCESTRAL SPECIES	2	ENSGT00390000006196	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Beluga whale	MODERN SPECIES	7	TTC17 (ENSDLEG00000019853)	HSD17B12 (ENSDLEG00000019838) #7	ALKBH3 (ENSDLEG00000019830) #8	ENSDLEG00000019821 #10	ACCS (ENSDLEG00000019811) #11	EXT2 (ENSDLEG00000019803) #12	ALX4 (ENSDLEG00000019799) #13	CD82 (ENSDLEG00000019794) #14	TSPAN18 (ENSDLEG00000019787) #15	TP53I11 (ENSDLEG00000019784) #16	PRDM11 (ENSDLEG00000019779) #17	SYT13 (ENSDLEG00000019775) #18	CHST1 (ENSDLEG00000019771) #19	SLC35C1 (ENSDLEG00000019768) #20	CRY2 (ENSDLEG00000019743) #21	MAPK8IP1 (ENSDLEG00000019735) #22	PEX16 (ENSDLEG00000019675) #24	LARGE2 (ENSDLEG00000019658) #25	ENSDLEG00000019655	PHF21A (ENSDLEG00000019624) #26	CREB3L1 (ENSDLEG00000019610) #28	DGKZ (ENSDLEG00000019589) #29	MDK (ENSDLEG00000019582) #30	CHRM4 (ENSDLEG00000019579) #31	AMBRA1 (ENSDLEG00000019560) #32	HARBI1 (ENSDLEG00000019555) #33	ATG13 (ENSDLEG00000019150) #34	ARHGAP1 (ENSDLEG00000018942) #35	ZNF408 (ENSDLEG00000018910) #36	F2 (ENSDLEG00000018821) #37	CKAP5 (ENSDLEG00000018239)
Narwhal	MODERN SPECIES	314	API5 (ENSMMNG00015015999)	TTC17 (ENSMMNG00015016233)	HSD17B12 (ENSMMNG00015016514) #7	ACCSL (ENSMMNG00015016665) #10	ACCS (ENSMMNG00015016880) #11	EXT2 (ENSMMNG00015017366) #12	ALX4 (ENSMMNG00015017478) #13	CD82 (ENSMMNG00015017522) #14	TSPAN18 (ENSMMNG00015017592) #15	TP53I11 (ENSMMNG00015017641) #16	PRDM11 (ENSMMNG00015017700) #17	SYT13 (ENSMMNG00015017742) #18	CHST1 (ENSMMNG00015017784) #19	SLC35C1 (ENSMMNG00015017798) #20	CRY2 (ENSMMNG00015017838) #21	MAPK8IP1 (ENSMMNG00015017984) #22	FREY1 (ENSMMNG00015018127) #23	PEX16 (ENSMMNG00015018197) #24	LARGE2 (ENSMMNG00015018329) #25	PHF21A (ENSMMNG00015018555) #26	CREB3L1 (ENSMMNG00015018682) #28	DGKZ (ENSMMNG00015018868) #29	MDK (ENSMMNG00015019173) #30	CHRM4 (ENSMMNG00015019208) #31	AMBRA1 (ENSMMNG00015019294) #32	HARBI1 (ENSMMNG00015019436) #33	ATG13 (ENSMMNG00015019491) #34	ARHGAP1 (ENSMMNG00015019583) #35	ZNF408 (ENSMMNG00015019610) #36	F2 (ENSMMNG00015019642) #37	CKAP5 (ENSMMNG00015019798)
Vaquita	MODERN SPECIES	19	TTC17 (ENSPSNG00000020829)	HSD17B12 (ENSPSNG00000020946) #7	ALKBH3 (ENSPSNG00000020981) #8	C11orf96 (ENSPSNG00000021018) #9	ENSPSNG00000021026	ACCS (ENSPSNG00000021036) #11	EXT2 (ENSPSNG00000021099) #12	ALX4 (ENSPSNG00000021198) #13	CD82 (ENSPSNG00000021231) #14	TP53I11 (ENSPSNG00000004006) #16	PRDM11 (ENSPSNG00000004037) #17	SYT13 (ENSPSNG00000004053) #18	CHST1 (ENSPSNG00000004065) #19	SLC35C1 (ENSPSNG00000004076) #20	CRY2 (ENSPSNG00000004100) #21	MAPK8IP1 (ENSPSNG00000004148) #22	FREY1 (ENSPSNG00000004225) #23	PEX16 (ENSPSNG00000004261) #24	LARGE2 (ENSPSNG00000004402) #25	PHF21A (ENSPSNG00000004656) #26	CREB3L1 (ENSPSNG00000004707) #28	DGKZ (ENSPSNG00000004933) #29	MDK (ENSPSNG00000005164) #30	CHRM4 (ENSPSNG00000005202) #31	AMBRA1 (ENSPSNG00000005291) #32	HARBI1 (ENSPSNG00000005453) #33	ATG13 (ENSPSNG00000005490) #34	ARHGAP1 (ENSPSNG00000005549) #35	ZNF408 (ENSPSNG00000005582) #36	F2 (ENSPSNG00000005610) #37	CKAP5 (ENSPSNG00000005667)
Sperm whale	MODERN SPECIES	7	API5 (ENSPCTG00005014154)	TTC17 (ENSPCTG00005014617)	HSD17B12 (ENSPCTG00005014877) #7	ALKBH3 (ENSPCTG00005014964) #8	C16H11orf96 (ENSPCTG00005015005) #9	ACCSL (ENSPCTG00005015019) #10	EXT2 (ENSPCTG00005015291) #12	ALX4 (ENSPCTG00005015649) #13	TSPAN18 (ENSPCTG00005015731) #15	ENSPCTG00005015760 #14	PRDM11 (ENSPCTG00005015782) #17	SYT13 (ENSPCTG00005015941) #18	CHST1 (ENSPCTG00005016008) #19	SLC35C1 (ENSPCTG00005016021) #20	CRY2 (ENSPCTG00005016092) #21	MAPK8IP1 (ENSPCTG00005016404) #22	C16H11orf94 (ENSPCTG00005016710) #23	PEX16 (ENSPCTG00005016747) #24	LARGE2 (ENSPCTG00005016908) #25	PHF21A (ENSPCTG00005017366) #26	AMBRA1 (ENSPCTG00005017524) #32	ENSPCTG00005018324 #34	CKAP5 (ENSPCTG00005019025)	LRP4 (ENSPCTG00005019305)	ENSPCTG00005019663	NR1H3 (ENSPCTG00005019704)	ENSPCTG00005019900	CELF1 (ENSPCTG00005020176)	NDUFS3 (ENSPCTG00005020272)	FAM180B (ENSPCTG00005020314)	ENSPCTG00005020333
Blue whale	MODERN SPECIES	19	ALKBH3 (ENSBMSG00010013420) #8	C11orf96 (ENSBMSG00010013431) #9	ENSBMSG00010013443	ACCS (ENSBMSG00010013522) #11	EXT2 (ENSBMSG00010013657) #12	ALX4 (ENSBMSG00010013696) #13	CD82 (ENSBMSG00010013718) #14	TSPAN18 (ENSBMSG00010013734) #15	TP53I11 (ENSBMSG00010013752) #16	PRDM11 (ENSBMSG00010013777) #17	ENSBMSG00010013795	SYT13 (ENSBMSG00010013804) #18	CHST1 (ENSBMSG00010013813) #19	SLC35C1 (ENSBMSG00010013820) #20	CRY2 (ENSBMSG00010013886) #21	MAPK8IP1 (ENSBMSG00010014091) #22	FREY1 (ENSBMSG00010014231) #23	PEX16 (ENSBMSG00010014252) #24	LARGE2 (ENSBMSG00010014314) #25	PHF21A (ENSBMSG00010014561) #26	CREB3L1 (ENSBMSG00010014728) #28	DGKZ (ENSBMSG00010014872) #29	MDK (ENSBMSG00010015583) #30	CHRM4 (ENSBMSG00010015622) #31	AMBRA1 (ENSBMSG00010015727) #32	HARBI1 (ENSBMSG00010017065) #33	ATG13 (ENSBMSG00010017110) #34	ARHGAP1 (ENSBMSG00010017220) #35	ENSBMSG00010017280	ZNF408 (ENSBMSG00010017299) #36	F2 (ENSBMSG00010017325) #37
Pecora	ANCESTRAL SPECIES	7	ENSGT00390000016821 #9	ENSGT00910000148817	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00930000151992	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Yarkand deer	MODERN SPECIES		ALKBH3 (ENSCHYG00000000269) #8	C11orf96 (ENSCHYG00000000279) #9	ACCSL (ENSCHYG00000000316) #10	ACCS (ENSCHYG00000000358) #11	EXT2 (ENSCHYG00000000443) #12	ALX4 (ENSCHYG00000000519) #13	CD82 (ENSCHYG00000000545) #14	TSPAN18 (ENSCHYG00000000585) #15	ENSCHYG00000000622 #16	ENSCHYG00000000654	PRDM11 (ENSCHYG00000000644) #17	SYT13 (ENSCHYG00000000666) #18	CHST1 (ENSCHYG00000000673) #19	SLC35C1 (ENSCHYG00000000680) #20	CRY2 (ENSCHYG00000000698) #21	MAPK8IP1 (ENSCHYG00000000750) #22	FREY1 (ENSCHYG00000000819) #23	PEX16 (ENSCHYG00000000848) #24	LARGE2 (ENSCHYG00000000920) #25	PHF21A (ENSCHYG00000000954) #26	CREB3L1 (ENSCHYG00000001030) #28	DGKZ (ENSCHYG00000001154) #29	MDK (ENSCHYG00000001474) #30	CHRM4 (ENSCHYG00000001502) #31	AMBRA1 (ENSCHYG00000001540) #32	HARBI1 (ENSCHYG00000001684) #33	ATG13 (ENSCHYG00000001705) #34	ARHGAP1 (ENSCHYG00000001791) #35	ZNF408 (ENSCHYG00000001850) #36	F2 (ENSCHYG00000001885) #37	CKAP5 (ENSCHYG00000001967)
Percora_a	ANCESTRAL SPECIES	6	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00910000148817	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Bovidae	ANCESTRAL SPECIES	6	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00910000148817	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Caprinae	ANCESTRAL SPECIES	6	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00910000148817	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Goat	MODERN SPECIES	6	HSD17B12 (ENSCHIG00000011795) #7	ALKBH3 (ENSCHIG00000017579) #8	ENSCHIG00000016194 #9	ACCSL (ENSCHIG00000010057) #10	ACCS (ENSCHIG00000026253) #11	EXT2 (ENSCHIG00000026007) #12	ALX4 (ENSCHIG00000010305) #13	CD82 (ENSCHIG00000015537) #14	TSPAN18 (ENSCHIG00000024681) #15	TP53I11 (ENSCHIG00000017884) #16	PRDM11 (ENSCHIG00000003161) #17	SYT13 (ENSCHIG00000027048) #18	CHST1 (ENSCHIG00000008696) #19	SLC35C1 (ENSCHIG00000021201) #20	CRY2 (ENSCHIG00000023621) #21	MAPK8IP1 (ENSCHIG00000015720) #22	PEX16 (ENSCHIG00000011489) #24	LARGE2 (ENSCHIG00000021453) #25	PHF21A (ENSCHIG00000023760) #26	CREB3L1 (ENSCHIG00000008753) #28	DGKZ (ENSCHIG00000018020) #29	MDK (ENSCHIG00000020969) #30	CHRM4 (ENSCHIG00000006372) #31	AMBRA1 (ENSCHIG00000016854) #32	HARBI1 (ENSCHIG00000014327) #33	ATG13 (ENSCHIG00000014614) #34	ARHGAP1 (ENSCHIG00000022137) #35	ZNF408 (ENSCHIG00000025346) #36	F2 (ENSCHIG00000024270) #37	ENSCHIG00000009743	CKAP5 (ENSCHIG00000018334)
Rambouillet Sheep	MODERN SPECIES	6	ENSOARG00020019476 #7	ALKBH3 (ENSOARG00020019554) #8	C11orf96 (ENSOARG00020019596) #9	ENSOARG00020019621	ENSOARG00020019654 #10	ACCS (ENSOARG00020019774) #11	EXT2 (ENSOARG00020019927) #12	ALX4 (ENSOARG00020020142) #13	CD82 (ENSOARG00020020176) #14	TSPAN18 (ENSOARG00020020280) #15	TP53I11 (ENSOARG00020020367) #16	PRDM11 (ENSOARG00020020437) #17	SYT13 (ENSOARG00020020545) #18	SLC35C1 (ENSOARG00020020655) #20	CRY2 (ENSOARG00020020700) #21	MAPK8IP1 (ENSOARG00020021179) #22	FREY1 (ENSOARG00020021284) #23	PEX16 (ENSOARG00020021321) #24	LARGE2 (ENSOARG00020021424) #25	PHF21A (ENSOARG00020021567) #26	CREB3L1 (ENSOARG00020021730) #28	DGKZ (ENSOARG00020021820) #29	MDK (ENSOARG00020022725) #30	CHRM4 (ENSOARG00020022796) #31	AMBRA1 (ENSOARG00020022829) #32	HARBI1 (ENSOARG00020023065) #33	ATG13 (ENSOARG00020023093) #34	ARHGAP1 (ENSOARG00020023238) #35	ZNF408 (ENSOARG00020023273) #36	F2 (ENSOARG00020023298) #37	CKAP5 (ENSOARG00020023388)
Bovinae	ANCESTRAL SPECIES	26	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b.d.a #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
American bison	MODERN SPECIES	3100											TP53I11 (ENSBBBG00000014364) #16	PRDM11 (ENSBBBG00000014336) #17	SYT13 (ENSBBBG00000014325) #18	SLC35C1 (ENSBBBG00000014315) #20	CRY2 (ENSBBBG00000003251) #21	MAPK8IP1 (ENSBBBG00000003238) #22	FREY1 (ENSBBBG00000001443) #23	PEX16 (ENSBBBG00000003214) #24	LARGE2 (ENSBBBG00000014161) #25	PHF21A (ENSBBBG00000003187) #26	CREB3L1 (ENSBBBG00000003171) #28	ENSBBBG00000003163 #29	ENSBBBG00000014102 #30	CHRM4 (ENSBBBG00000014075) #31	AMBRA1 (ENSBBBG00000014063) #32	HARBI1 (ENSBBBG00000013882) #33	ATG13 (ENSBBBG00000002985) #34	ARHGAP1 (ENSBBBG00000013736) #35	ZNF408 (ENSBBBG00000013728) #36	F2 (ENSBBBG00000002915) #37	CKAP5 (ENSBBBG00000002889)
Bos	ANCESTRAL SPECIES	25	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b.d.a #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Bos_b	ANCESTRAL SPECIES	12	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b.d.a #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Cow	MODERN SPECIES	6	C15H11orf96 (ENSBTAG00000045822) #9	ACCSL (ENSBTAG00000012053) #10	ACCS (ENSBTAG00000008465) #11	EXT2 (ENSBTAG00000019644) #12	ALX4 (ENSBTAG00000027563) #13	CD82 (ENSBTAG00000031252) #14	TSPAN18 (ENSBTAG00000021484) #15	ENSBTAG00000053859	TP53I11 (ENSBTAG00000017228) #16	PRDM11 (ENSBTAG00000006443) #17	SYT13 (ENSBTAG00000001703) #18	ENSBTAG00000054083	CHST1 (ENSBTAG00000003721) #19	SLC35C1 (ENSBTAG00000003199) #20	CRY2 (ENSBTAG00000021223) #21	MAPK8IP1 (ENSBTAG00000000317) #22	FREY1 (ENSBTAG00000027562) #23	PEX16 (ENSBTAG00000003126) #24	LARGE2 (ENSBTAG00000009607) #25	PHF21A (ENSBTAG00000009611) #26	CREB3L1 (ENSBTAG00000006143) #28	DGKZ (ENSBTAG00000013636) #29	MDK (ENSBTAG00000007740) #30	CHRM4 (ENSBTAG00000033699) #31	AMBRA1 (ENSBTAG00000004282) #32	HARBI1 (ENSBTAG00000004639) #33	ATG13 (ENSBTAG00000017325) #34	ARHGAP1 (ENSBTAG00000016501) #35	ZNF408 (ENSBTAG00000027557) #36	F2 (ENSBTAG00000007148) #37	CKAP5 (ENSBTAG00000004448)
Hybrid Bos Indicus	MODERN SPECIES	6	C11orf96 (ENSBIXG00005002746) #9	ACCSL (ENSBIXG00005016927) #10	ACCS (ENSBIXG00005002769) #11	EXT2 (ENSBIXG00005017227) #12	ALX4 (ENSBIXG00005017263) #13	CD82 (ENSBIXG00005017303) #14	ENSBIXG00005017320	TSPAN18 (ENSBIXG00005017360) #15	TP53I11 (ENSBIXG00005006359) #16	PRDM11 (ENSBIXG00005002842) #17	SYT13 (ENSBIXG00005017503) #18	ENSBIXG00005017575	CHST1 (ENSBIXG00005017606) #19	SLC35C1 (ENSBIXG00005002867) #20	CRY2 (ENSBIXG00005017785) #21	MAPK8IP1 (ENSBIXG00005017891) #22	FREY1 (ENSBIXG00005017911) #23	PEX16 (ENSBIXG00005005656) #24	LARGE2 (ENSBIXG00005018050) #25	PHF21A (ENSBIXG00005018097) #26	CREB3L1 (ENSBIXG00005002939) #28	DGKZ (ENSBIXG00005018295) #29	ENSBIXG00005018454 #30	CHRM4 (ENSBIXG00005018467) #31	AMBRA1 (ENSBIXG00005007656) #32	HARBI1 (ENSBIXG00005018637) #33	ATG13 (ENSBIXG00005003045) #34	ARHGAP1 (ENSBIXG00005003058) #35	ZNF408 (ENSBIXG00005018816) #36	F2 (ENSBIXG00005018882) #37	CKAP5 (ENSBIXG00005018988)
Bos_a	ANCESTRAL SPECIES	36	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b.d.a #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000155097.e.a	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37
Domestic yak	MODERN SPECIES	4	HSD17B12 (ENSBGRG00000024610) #7	ALKBH3 (ENSBGRG00000024727) #8	ENSBGRG00000024758	ENSBGRG00000024769 #10	ACCS (ENSBGRG00000024813) #11	EXT2 (ENSBGRG00000024837) #12	ALX4 (ENSBGRG00000024852) #13	CD82 (ENSBGRG00000024889) #14	TSPAN18 (ENSBGRG00000024939) #15	ENSBGRG00000024991 #16	PRDM11 (ENSBGRG00000008834) #17	SYT13 (ENSBGRG00000009098) #18	CHST1 (ENSBGRG00000009183) #19	SLC35C1 (ENSBGRG00000009196) #20	CRY2 (ENSBGRG00000009273) #21	MAPK8IP1 (ENSBGRG00000009722) #22	FREY1 (ENSBGRG00000009996) #23	PEX16 (ENSBGRG00000010057) #24	LARGE2 (ENSBGRG00000010390) #25	PHF21A (ENSBGRG00000010552) #26	CREB3L1 (ENSBGRG00000010789) #28	DGKZ (ENSBGRG00000011064) #29	ENSBGRG00000012888 #30	CHRM4 (ENSBGRG00000012936) #31	AMBRA1 (ENSBGRG00000012979) #32	TAF9 (ENSBGRG00000013181)	HARBI1 (ENSBGRG00000013222) #33	ATG13 (ENSBGRG00000013263) #34	ARHGAP1 (ENSBGRG00000013511) #35	ZNF408 (ENSBGRG00000013630) #36	F2 (ENSBGRG00000013793) #37
Wild yak	MODERN SPECIES	2113													CHST1 (ENSBMUG00000013748) #19	SLC35C1 (ENSBMUG00000013779) #20	CRY2 (ENSBMUG00000013827) #21	MAPK8IP1 (ENSBMUG00000013925) #22	FREY1 (ENSBMUG00000013987) #23	PEX16 (ENSBMUG00000014004) #24	LARGE2 (ENSBMUG00000014075) #25	PHF21A (ENSBMUG00000014198) #26
Siberian musk deer	MODERN SPECIES	118	TTC17 (ENSMMSG00000011534)	HSD17B12 (ENSMMSG00000011385) #7	ALKBH3 (ENSMMSG00000011296) #8	ACCSL (ENSMMSG00000011043) #10	ACCS (ENSMMSG00000010941) #11	EXT2 (ENSMMSG00000010833) #12	ALX4 (ENSMMSG00000010786) #13	CD82 (ENSMMSG00000010721) #14	TSPAN18 (ENSMMSG00000010679) #15	TP53I11 (ENSMMSG00000010631) #16	PRDM11 (ENSMMSG00000010568) #17	SYT13 (ENSMMSG00000010526) #18	CHST1 (ENSMMSG00000010503) #19	SLC35C1 (ENSMMSG00000010467) #20	CRY2 (ENSMMSG00000010187) #21	MAPK8IP1 (ENSMMSG00000010074) #22	FREY1 (ENSMMSG00000010042) #23	PEX16 (ENSMMSG00000009980) #24	LARGE2 (ENSMMSG00000009888) #25	PHF21A (ENSMMSG00000009796) #26	CREB3L1 (ENSMMSG00000009753) #28	DGKZ (ENSMMSG00000008653) #29	MDK (ENSMMSG00000008497) #30	CHRM4 (ENSMMSG00000008482) #31	AMBRA1 (ENSMMSG00000008353) #32	HARBI1 (ENSMMSG00000008321) #33	ATG13 (ENSMMSG00000008155) #34	ARHGAP1 (ENSMMSG00000008062) #35	ZNF408 (ENSMMSG00000008033) #36	F2 (ENSMMSG00000008000) #37	CKAP5 (ENSMMSG00000007823)
Camelidae	ANCESTRAL SPECIES	25	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Arabian camel	MODERN SPECIES	1	HSD17B12 (ENSCDRG00005013288) #7	ALKBH3 (ENSCDRG00005013227) #8	C11orf96 (ENSCDRG00005013211) #9	ACCSL (ENSCDRG00005013037) #10	ACCS (ENSCDRG00005012856) #11	EXT2 (ENSCDRG00005012724) #12	ALX4 (ENSCDRG00005012645) #13	CD82 (ENSCDRG00005012531) #14	TSPAN18 (ENSCDRG00005012470) #15	TP53I11 (ENSCDRG00005012371) #16	PRDM11 (ENSCDRG00005012242) #17	SYT13 (ENSCDRG00005012181) #18	CHST1 (ENSCDRG00005012167) #19	SLC35C1 (ENSCDRG00005012129) #20	CRY2 (ENSCDRG00005011968) #21	MAPK8IP1 (ENSCDRG00005011734) #22	FREY1 (ENSCDRG00005011672) #23	PEX16 (ENSCDRG00005011593) #24	LARGE2 (ENSCDRG00005011467) #25	PHF21A (ENSCDRG00005011242) #26	CREB3L1 (ENSCDRG00005011173) #28	DGKZ (ENSCDRG00005010475) #29	MDK (ENSCDRG00005010345) #30	CHRM4 (ENSCDRG00005010302) #31	AMBRA1 (ENSCDRG00005009861) #32	HARBI1 (ENSCDRG00005009768) #33	ATG13 (ENSCDRG00005009422) #34	ARHGAP1 (ENSCDRG00005009320) #35	ZNF408 (ENSCDRG00005009244) #36	F2 (ENSCDRG00005009091) #37	CKAP5 (ENSCDRG00005008832)
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00910000148141	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37
Laurasiatheria_c	ANCESTRAL SPECIES	9	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Equus	ANCESTRAL SPECIES	56	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Donkey	MODERN SPECIES	8	HSD17B12 (ENSEASG00005014853) #7	ALKBH3 (ENSEASG00005014856) #8	C11orf96 (ENSEASG00005014860) #9	ACCSL (ENSEASG00005014863) #10	ACCS (ENSEASG00005014868) #11	EXT2 (ENSEASG00005014877) #12	ALX4 (ENSEASG00005014886) #13	CD82 (ENSEASG00005014890) #14	TSPAN18 (ENSEASG00005026170) #15	ENSEASG00005024242 #16	PRDM11 (ENSEASG00005014907) #17	SYT13 (ENSEASG00005014911) #18	CHST1 (ENSEASG00005014919) #19	SLC35C1 (ENSEASG00005014922) #20	CRY2 (ENSEASG00005014923) #21	MAPK8IP1 (ENSEASG00005014927) #22	FREY1 (ENSEASG00005030976) #23	PEX16 (ENSEASG00005014929) #24	LARGE2 (ENSEASG00005014935) #25	PHF21A (ENSEASG00005014943) #26	CREB3L1 (ENSEASG00005014953) #28	DGKZ (ENSEASG00005014964) #29	MDK (ENSEASG00005029065) #30	CHRM4 (ENSEASG00005029426) #31	AMBRA1 (ENSEASG00005015004) #32	HARBI1 (ENSEASG00005015208) #33	ATG13 (ENSEASG00005015246) #34	ARHGAP1 (ENSEASG00005015450) #35	ZNF408 (ENSEASG00005015461) #36	F2 (ENSEASG00005015463) #37	CKAP5 (ENSEASG00005015601)
Horse	MODERN SPECIES	3	API5 (ENSECAG00000047216)	TTC17 (ENSECAG00000000753)	ENSECAG00000057228	HSD17B12 (ENSECAG00000010538) #7	ALKBH3 (ENSECAG00000010673) #8	ACCSL (ENSECAG00000011908) #10	ACCS (ENSECAG00000013484) #11	EXT2 (ENSECAG00000015881) #12	ALX4 (ENSECAG00000019892) #13	CD82 (ENSECAG00000020051) #14	TP53I11 (ENSECAG00000023101) #16	PRDM11 (ENSECAG00000023612) #17	SYT13 (ENSECAG00000023889) #18	CHST1 (ENSECAG00000024106) #19	SLC35C1 (ENSECAG00000000770) #21	MAPK8IP1 (ENSECAG00000007619) #22	PEX16 (ENSECAG00000011531) #24	LARGE2 (ENSECAG00000014596) #25	PHF21A (ENSECAG00000017082) #26	CREB3L1 (ENSECAG00000018306) #28	DGKZ (ENSECAG00000018796) #29	ENSECAG00000029071 #30	CHRM4 (ENSECAG00000023751) #31	AMBRA1 (ENSECAG00000023789) #32	HARBI1 (ENSECAG00000024452) #33	ATG13 (ENSECAG00000024606) #34	ARHGAP1 (ENSECAG00000009844) #35	ZNF408 (ENSECAG00000010878) #36	F2 (ENSECAG00000011321) #37	CKAP5 (ENSECAG00000015563)	LRP4 (ENSECAG00000023663)
Chiroptera	ANCESTRAL SPECIES	5	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Megabat	MODERN SPECIES	3270														SLC35C1 (ENSPVAG00000003526) #20	CRY2 (ENSPVAG00000003527) #21	MAPK8IP1 (ENSPVAG00000003529) #22	PEX16 (ENSPVAG00000003531) #24	LARGE2 (ENSPVAG00000003532) #25	PHF21A (ENSPVAG00000003534) #26
Microchiroptera	ANCESTRAL SPECIES	31	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Microbat	MODERN SPECIES	1034													CHST1 (ENSMLUG00000002287) #19	SLC35C1 (ENSMLUG00000014731) #20	CRY2 (ENSMLUG00000014733) #21	MAPK8IP1 (ENSMLUG00000014740) #22	FREY1 (ENSMLUG00000027006) #23	PEX16 (ENSMLUG00000014751) #24	LARGE2 (ENSMLUG00000014764) #25	PHF21A (ENSMLUG00000014773) #26	CREB3L1 (ENSMLUG00000009820) #28	DGKZ (ENSMLUG00000009836) #29	MDK (ENSMLUG00000022787) #30	CHRM4 (ENSMLUG00000025622) #31	AMBRA1 (ENSMLUG00000009880) #32	HARBI1 (ENSMLUG00000011485) #33	ATG13 (ENSMLUG00000017626) #34	ARHGAP1 (ENSMLUG00000017628) #35	ZNF408 (ENSMLUG00000017629) #36	F2 (ENSMLUG00000017631) #37	CKAP5 (ENSMLUG00000017633)
Greater horseshoe bat	MODERN SPECIES	2	HSD17B12 (ENSRFEG00010004074) #7	ALKBH3 (ENSRFEG00010004046) #8	C11orf96 (ENSRFEG00010004030) #9	ACCSL (ENSRFEG00010004009) #10	ACCS (ENSRFEG00010003969) #11	EXT2 (ENSRFEG00010003919) #12	ALX4 (ENSRFEG00010003877) #13	CD82 (ENSRFEG00010003839) #14	TSPAN18 (ENSRFEG00010003813) #15	TP53I11 (ENSRFEG00010003790) #16	PRDM11 (ENSRFEG00010003762) #17	SYT13 (ENSRFEG00010003732) #18	CHST1 (ENSRFEG00010003717) #19	SLC35C1 (ENSRFEG00010003706) #20	CRY2 (ENSRFEG00010003641) #21	MAPK8IP1 (ENSRFEG00010003534) #22	FREY1 (ENSRFEG00010003489) #23	PEX16 (ENSRFEG00010003462) #24	LARGE2 (ENSRFEG00010003418) #25	PHF21A (ENSRFEG00010003386) #26	CREB3L1 (ENSRFEG00010003317) #28	DGKZ (ENSRFEG00010002446) #29	MDK (ENSRFEG00010001996) #30	CHRM4 (ENSRFEG00010001975) #31	AMBRA1 (ENSRFEG00010001788) #32	HARBI1 (ENSRFEG00010001682) #33	ATG13 (ENSRFEG00010001557) #34	ARHGAP1 (ENSRFEG00010001486) #35	ZNF408 (ENSRFEG00010001453) #36	F2 (ENSRFEG00010001400) #37	CKAP5 (ENSRFEG00010001142)
Carnivora	ANCESTRAL SPECIES	7	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00910000148141	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37
Caniformia	ANCESTRAL SPECIES	25	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00910000148141	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37
Caniformia_b	ANCESTRAL SPECIES	3	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00910000148141	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37
Ursidae	ANCESTRAL SPECIES	2	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00910000148817	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00910000148141	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37
Ursus	ANCESTRAL SPECIES	85	ENSGT00390000016821 #9	ENSGT00910000148817	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000169558	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00910000148141	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
American black bear	DUPLICATION
American black bear	MODERN SPECIES	8077																ENSUAMG00000013672 #22	PEX16 (ENSUAMG00000013673) #24	LARGE2 (ENSUAMG00000013676) #25	PHF21A (ENSUAMG00000013681) #26
American black bear	MODERN SPECIES	4917														SLC35C1 (ENSUAMG00000018780) #20	CRY2 (ENSUAMG00000018228) #21	ENSUAMG00000018079 #22
Giant Panda	MODERN SPECIES	7	TTC17 (ENSAMEG00000011414)	HSD17B12 (ENSAMEG00000004853) #7	ALKBH3 (ENSAMEG00000004842) #8	ACCSL (ENSAMEG00000004827) #10	EXT2 (ENSAMEG00000004795) #12	ALX4 (ENSAMEG00000027276) #13	CD82 (ENSAMEG00000009274) #14	TSPAN18 (ENSAMEG00000000765) #15	TP53I11 (ENSAMEG00000000751) #16	ENSAMEG00000024608 #16	PRDM11 (ENSAMEG00000000745) #17	SYT13 (ENSAMEG00000024139) #18	CHST1 (ENSAMEG00000018807) #19	SLC35C1 (ENSAMEG00000026256) #20	CRY2 (ENSAMEG00000000688) #21	MAPK8IP1 (ENSAMEG00000000657) #22	FREY1 (ENSAMEG00000000654) #23	PEX16 (ENSAMEG00000000638) #24	LARGE2 (ENSAMEG00000000610) #25	PHF21A (ENSAMEG00000000598) #26	CREB3L1 (ENSAMEG00000006633) #28	DGKZ (ENSAMEG00000006657) #29	MDK (ENSAMEG00000006752) #30	CHRM4 (ENSAMEG00000020060) #31	AMBRA1 (ENSAMEG00000006762) #32	ENSAMEG00000023608	HARBI1 (ENSAMEG00000006795) #33	ATG13 (ENSAMEG00000006798) #34	ARHGAP1 (ENSAMEG00000006844) #35	ZNF408 (ENSAMEG00000006904) #36	F2 (ENSAMEG00000006910) #37
Mustelinae	ANCESTRAL SPECIES	74	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
American mink	MODERN SPECIES	45	C11orf96 (ENSNVIG00000013521) #9	ACCSL (ENSNVIG00000013497) #10	ACCS (ENSNVIG00000013477) #11	EXT2 (ENSNVIG00000013441) #12	ALX4 (ENSNVIG00000013421) #13	ENSNVIG00000013407	CD82 (ENSNVIG00000013361) #14	ENSNVIG00000013354	TSPAN18 (ENSNVIG00000013342) #15	P5I11 (ENSNVIG00000013330) #16	PRDM11 (ENSNVIG00000013288) #17	SYT13 (ENSNVIG00000013272) #18	CHST1 (ENSNVIG00000013259) #19	FUCT1 (ENSNVIG00000013223) #20	CRY2 (ENSNVIG00000013168) #21	MAPK8IP1 (ENSNVIG00000013121) #22	FREY1 (ENSNVIG00000013108) #23	PEX16 (ENSNVIG00000013046) #24	LARGE2 (ENSNVIG00000013006) #25	PHF21A (ENSNVIG00000012951) #26	CREB3L1 (ENSNVIG00000012921) #28	DGKZ (ENSNVIG00000012726) #29	ENSNVIG00000012699 #30	CHRM4 (ENSNVIG00000012697) #31	AMBRA1 (ENSNVIG00000012478) #32	HARB1 (ENSNVIG00000012442) #33	ATG13 (ENSNVIG00000012327) #34	ZNF408 (ENSNVIG00000012294) #36	F2 (ENSNVIG00000012216) #37	CKAP5 (ENSNVIG00000012011)	LRP4 (ENSNVIG00000011939)
Ferret	MODERN SPECIES	255	ACCSL (ENSMPUG00000006138) #10	ACCS (ENSMPUG00000006124) #11	EXT2 (ENSMPUG00000006112) #12	ALX4 (ENSMPUG00000006095) #13	CD82 (ENSMPUG00000006084) #14	TP53I11 (ENSMPUG00000006042) #16	TSPAN18 (ENSMPUG00000006031) #15	ENSMPUG00000006027	ENSMPUG00000006019 #17	ENSMPUG00000006010	ENSMPUG00000005998 #18	ENSMPUG00000005991	CHST1 (ENSMPUG00000018441) #19	SLC35C1 (ENSMPUG00000005984) #20	CRY2 (ENSMPUG00000005785) #21	MAPK8IP1 (ENSMPUG00000005682) #22	PEX16 (ENSMPUG00000005672) #24	LARGE2 (ENSMPUG00000005660) #25	PHF21A (ENSMPUG00000005646) #26	CREB3L1 (ENSMPUG00000005639) #28	DGKZ (ENSMPUG00000005616) #29	MDK (ENSMPUG00000005575) #30	CHRM4 (ENSMPUG00000018440) #31	AMBRA1 (ENSMPUG00000005552) #32	HARBI1 (ENSMPUG00000005540) #33	ATG13 (ENSMPUG00000005512) #34	ARHGAP1 (ENSMPUG00000005499) #35	ZNF408 (ENSMPUG00000005490) #36	F2 (ENSMPUG00000005310) #37	CKAP5 (ENSMPUG00000005279)	LRP4 (ENSMPUG00000005034)
Canidae	ANCESTRAL SPECIES	13	ENSGT00440000033504.A	ENSGT00940000160155	ENSGT00550000074828.a.h	ENSGT00940000161780	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b.e.a #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Canis_lupus	ANCESTRAL SPECIES	7	ENSGT00440000033504.A	ENSGT00940000160155	ENSGT00550000074828.a.h	ENSGT00940000161780	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b.e.a #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Dog	MODERN SPECIES	9	CD151 (ENSCAFG00845006743)	CRACR2B (ENSCAFG00845006671)	PNPLA2 (ENSCAFG00845006576)	ENSCAFG00845006496	ENSCAFG00845006388	EXT2 (ENSCAFG00845006136) #12	ALX4 (ENSCAFG00845006003) #13	CD82 (ENSCAFG00845005975) #14	TSPAN18 (ENSCAFG00845005948) #15	TP53I11 (ENSCAFG00845005919) #16	PRDM11 (ENSCAFG00845029718) #17	SYT13 (ENSCAFG00845029683) #18	CHST1 (ENSCAFG00845029662) #19	SLC35C1 (ENSCAFG00845029632) #20	CRY2 (ENSCAFG00845029583) #21	MAPK8IP1 (ENSCAFG00845029426) #22	C18H11orf94 (ENSCAFG00845029379) #23	PEX16 (ENSCAFG00845029302) #24	LARGE2 (ENSCAFG00845029215) #25	PHF21A (ENSCAFG00845029086) #26	CREB3L1 (ENSCAFG00845028997) #28	DGKZ (ENSCAFG00845028466) #29	ENSCAFG00845028187 #30	CHRM4 (ENSCAFG00845028143) #31	ENSCAFG00845028115	AMBRA1 (ENSCAFG00845027652) #32	HARBI1 (ENSCAFG00845027517) #33	ATG13 (ENSCAFG00845027292) #34	ARHGAP1 (ENSCAFG00845027069) #35	ZNF408 (ENSCAFG00845027019) #36	F2 (ENSCAFG00845026955) #37
Dingo	MODERN SPECIES	69	ENSCAFG00020017624	PNPLA2 (ENSCAFG00020017628)	ENSCAFG00020017684	PIDD1 (ENSCAFG00020017688)	ACCS (ENSCAFG00020017697) #11	EXT2 (ENSCAFG00020017760) #12	ALX4 (ENSCAFG00020017762) #13	CD82 (ENSCAFG00020017766) #14	TSPAN18 (ENSCAFG00020017771) #15	TP53I11 (ENSCAFG00020017772) #16	PRDM11 (ENSCAFG00020017777) #17	SYT13 (ENSCAFG00020017779) #18	CHST1 (ENSCAFG00020017785) #19	SLC35C1 (ENSCAFG00020017788) #20	CRY2 (ENSCAFG00020017805) #21	MAPK8IP1 (ENSCAFG00020018475) #22	PEX16 (ENSCAFG00020018482) #24	LARGE2 (ENSCAFG00020018489) #25	PHF21A (ENSCAFG00020018990) #26	CREB3L1 (ENSCAFG00020019008) #28	DGKZ (ENSCAFG00020019055) #29	ENSCAFG00020019107 #30	CHRM4 (ENSCAFG00020019111) #31	AMBRA1 (ENSCAFG00020019116) #32	HARBI1 (ENSCAFG00020019139) #33	ATG13 (ENSCAFG00020019142) #34	ARHGAP1 (ENSCAFG00020019150) #35	ZNF408 (ENSCAFG00020019155) #36	F2 (ENSCAFG00020019158) #37	CKAP5 (ENSCAFG00020019305)	LRP4 (ENSCAFG00020022152)
Red fox	MODERN SPECIES	49	CD151 (ENSVVUG00000000184)	CRACR2B (ENSVVUG00000000162)	PNPLA2 (ENSVVUG00000000122)	PIDD1 (ENSVVUG00000000083)	ACCS (ENSVVUG00000000057) #11	EXT2 (ENSVVUG00000027292) #12	ALX4 (ENSVVUG00000027285) #13	CD82 (ENSVVUG00000027274) #14	TSPAN18 (ENSVVUG00000027267) #15	TP53I11 (ENSVVUG00000027262) #16	PRDM11 (ENSVVUG00000027249) #17	SYT13 (ENSVVUG00000027243) #18	CHST1 (ENSVVUG00000027239) #19	SLC35C1 (ENSVVUG00000027235) #20	CRY2 (ENSVVUG00000027229) #21	MAPK8IP1 (ENSVVUG00000027198) #22	PEX16 (ENSVVUG00000027196) #24	LARGE2 (ENSVVUG00000027012) #25	PHF21A (ENSVVUG00000026999) #26	CREB3L1 (ENSVVUG00000026984) #28	DGKZ (ENSVVUG00000026981) #29	MDK (ENSVVUG00000026979) #30	CHRM4 (ENSVVUG00000026978) #31	AMBRA1 (ENSVVUG00000026969) #32	HARBI1 (ENSVVUG00000026967) #33	ATG13 (ENSVVUG00000026821) #34	ARHGAP1 (ENSVVUG00000026807) #35	ZNF408 (ENSVVUG00000026805) #36	F2 (ENSVVUG00000026767) #37	CKAP5 (ENSVVUG00000026762)	LRP4 (ENSVVUG00000026554)
Felidae	ANCESTRAL SPECIES		ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT01020000230401.a.a.a.i.b	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00500000045038.m.a.a	ENSGT00940000154234.b #37
Cat	MODERN SPECIES	241	API5 (ENSFCAG00000031994)	TTC17 (ENSFCAG00000023058)	HSD17B12 (ENSFCAG00000022122) #7	ACCSL (ENSFCAG00000005617) #10	EXT2 (ENSFCAG00000005619) #12	ALX4 (ENSFCAG00000005620) #13	ENSFCAG00000035141	CD82 (ENSFCAG00000012861) #14	TSPAN18 (ENSFCAG00000004186) #15	TP53I11 (ENSFCAG00000044947) #16	PRDM11 (ENSFCAG00000006658) #17	SYT13 (ENSFCAG00000030929) #18	CHST1 (ENSFCAG00000006661) #19	SLC35C1 (ENSFCAG00000026308) #20	CRY2 (ENSFCAG00000003188) #21	MAPK8IP1 (ENSFCAG00000003189) #22	FREY1 (ENSFCAG00000041581) #23	PEX16 (ENSFCAG00000003190) #24	LARGE2 (ENSFCAG00000021941) #25	PHF21A (ENSFCAG00000027311) #26	CREB3L1 (ENSFCAG00000018794) #28	DGKZ (ENSFCAG00000013634) #29	MDK (ENSFCAG00000023547) #30	CHRM4 (ENSFCAG00000024780) #31	AMBRA1 (ENSFCAG00000013635) #32	HARBI1 (ENSFCAG00000029910) #33	ATG13 (ENSFCAG00000013637) #34	ARHGAP1 (ENSFCAG00000013638) #35	ZNF408 (ENSFCAG00000029105) #36	ENSFCAG00000041074	F2 (ENSFCAG00000029088) #37
Panthera	ANCESTRAL SPECIES	13	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT01020000230401.a.a.a.i.b	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00500000045038.m.a.a	ENSGT00940000154234.b #37
Panthera_a	ANCESTRAL SPECIES	20	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT01020000230401.a.a.a.i.b	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00500000045038.m.a.a	ENSGT00940000154234.b #37
lion	MODERN SPECIES	10	ALKBH3 (ENSPLOG00000009033) #8	C11orf96 (ENSPLOG00000009053) #9	ACCSL (ENSPLOG00000009077) #10	ACCS (ENSPLOG00000009169) #11	EXT2 (ENSPLOG00000009265) #12	ALX4 (ENSPLOG00000009372) #13	CD82 (ENSPLOG00000009416) #14	TSPAN18 (ENSPLOG00000009462) #15	TP53I11 (ENSPLOG00000009507) #16	PRDM11 (ENSPLOG00000009558) #17	SYT13 (ENSPLOG00000009590) #18	CHST1 (ENSPLOG00000009626) #19	OTUB1 (ENSPLOG00000009639)	SLC35C1 (ENSPLOG00000009663) #20	CRY2 (ENSPLOG00000009691) #21	MAPK8IP1 (ENSPLOG00000009776) #22	FREY1 (ENSPLOG00000009880) #23	PEX16 (ENSPLOG00000009908) #24	PHF21A (ENSPLOG00000010070) #26	CREB3L1 (ENSPLOG00000004966) #28	DGKZ (ENSPLOG00000005116) #29	MDK (ENSPLOG00000005259) #30	CHRM4 (ENSPLOG00000005269) #31	AMBRA1 (ENSPLOG00000005299) #32	ENSPLOG00000005359	HARBI1 (ENSPLOG00000005373) #33	ATG13 (ENSPLOG00000005426) #34	ARHGAP1 (ENSPLOG00000005477) #35	ZNF408 (ENSPLOG00000005509) #36	ENSPLOG00000005532	F2 (ENSPLOG00000005576) #37
leopard	MODERN SPECIES	58	ACCSL (ENSPPRG00000005058) #10	ACCS (ENSPPRG00000004897) #11	EXT2 (ENSPPRG00000004504) #12	ALX4 (ENSPPRG00000001680) #13	ENSPPRG00000000608	CD82 (ENSPPRG00000000435) #14	TSPAN18 (ENSPPRG00000023207) #15	TP53I11 (ENSPPRG00000023362) #16	PRDM11 (ENSPPRG00000024084) #17	SYT13 (ENSPPRG00000017141) #18	CHST1 (ENSPPRG00000022251) #19	ENSPPRG00000016519	ENSPPRG00000016136	SLC35C1 (ENSPPRG00000015807) #20	CRY2 (ENSPPRG00000013303) #21	MAPK8IP1 (ENSPPRG00000011063) #22	FREY1 (ENSPPRG00000010618) #23	PEX16 (ENSPPRG00000010501) #24	LARGE2 (ENSPPRG00000010115) #25	PHF21A (ENSPPRG00000007738) #26	CREB3L1 (ENSPPRG00000006852) #28	DGKZ (ENSPPRG00000006446) #29	MDK (ENSPPRG00000001591) #30	CHRM4 (ENSPPRG00000021661) #31	AMBRA1 (ENSPPRG00000000398) #32	HARBI1 (ENSPPRG00000024315) #33	ATG13 (ENSPPRG00000024435) #34	ARHGAP1 (ENSPPRG00000017517) #35	ZNF408 (ENSPPRG00000016866) #36	ENSPPRG00000021564	F2 (ENSPPRG00000015996) #37
Tiger	MODERN SPECIES	168												CHST1 (ENSPTIG00000011120) #19	ENSPTIG00000009909	SLC35C1 (ENSPTIG00000011145) #20	CRY2 (ENSPTIG00000011440) #21	MAPK8IP1 (ENSPTIG00000011567) #22	FREY1 (ENSPTIG00000011773) #23	PEX16 (ENSPTIG00000011804) #24	LARGE2 (ENSPTIG00000012000) #25	PHF21A (ENSPTIG00000012098) #26	CREB3L1 (ENSPTIG00000012554) #28	DGKZ (ENSPTIG00000012708) #29	MDK (ENSPTIG00000012940) #30	CHRM4 (ENSPTIG00000009949) #31	AMBRA1 (ENSPTIG00000013363) #32	HARBI1 (ENSPTIG00000014054) #33	ATG13 (ENSPTIG00000014275) #34	ARHGAP1 (ENSPTIG00000014598) #35	ZNF408 (ENSPTIG00000015467) #36	F2 (ENSPTIG00000015545) #37	CKAP5 (ENSPTIG00000015717)
Atlantogenata	ANCESTRAL SPECIES	13	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00930000151992	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Xenarthra	ANCESTRAL SPECIES	19															ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Armadillo	MODERN SPECIES	1506															CRY2 (ENSDNOG00000039122) #21	MAPK8IP1 (ENSDNOG00000031412) #22	FREY1 (ENSDNOG00000034541) #23	PEX16 (ENSDNOG00000024927) #24	LARGE2 (ENSDNOG00000001204) #25	PHF21A (ENSDNOG00000001209) #26	CREB3L1 (ENSDNOG00000010500) #28	DGKZ (ENSDNOG00000024292) #29	ENSDNOG00000037925 #30	CHRM4 (ENSDNOG00000043079) #31	AMBRA1 (ENSDNOG00000049694) #32	ENSDNOG00000049497	HARBI1 (ENSDNOG00000002083) #33	ATG13 (ENSDNOG00000002084) #34	ARHGAP1 (ENSDNOG00000017314) #35	ZNF408 (ENSDNOG00000047669) #36	F2 (ENSDNOG00000012528) #37
Afrotheria	ANCESTRAL SPECIES	16	ENSGT00390000010991	ENSGT00390000006196	ENSGT00940000154860.j #7	ENSGT00940000157226 #8	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Tenrec	MODERN SPECIES	2110															CRY2 (ENSETEG00000014601) #21	MAPK8IP1 (ENSETEG00000014603) #22	ENSETEG00000014607 #24	LARGE2 (ENSETEG00000014610) #25	PHF21A (ENSETEG00000014616) #26
Afrotheria_a	ANCESTRAL SPECIES	17	ENSGT00390000010991	ENSGT00390000006196	ENSGT00940000154860.j #7	ENSGT00940000157226 #8	ENSGT00940000162841 #10	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000018235 #23	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000154234.b #37	ENSGT00390000014757
Hyrax	MODERN SPECIES	1708															CRY2 (ENSPCAG00000015775) #21	MAPK8IP1 (ENSPCAG00000015871) #22	PEX16 (ENSPCAG00000015934) #24	LARGE2 (ENSPCAG00000016014) #25	PHF21A (ENSPCAG00000016138) #26
Elephant	MODERN SPECIES	209	API5 (ENSLAFG00000001688)	TTC17 (ENSLAFG00000001692)	ENSLAFG00000003439 #7	ALKBH3 (ENSLAFG00000003441) #8	ACCSL (ENSLAFG00000014256) #10	ACCS (ENSLAFG00000010662) #11	EXT2 (ENSLAFG00000010668) #12	ALX4 (ENSLAFG00000010673) #13	TSPAN18 (ENSLAFG00000005533) #15	TP53I11 (ENSLAFG00000005709) #16	ENSLAFG00000001091 #17	SYT13 (ENSLAFG00000017702) #18	CHST1 (ENSLAFG00000009782) #19	SLC35C1 (ENSLAFG00000003806) #20	CRY2 (ENSLAFG00000027340) #21	MAPK8IP1 (ENSLAFG00000029841) #22	FREY1 (ENSLAFG00000031789) #23	PEX16 (ENSLAFG00000031489) #24	LARGE2 (ENSLAFG00000022018) #25	PHF21A (ENSLAFG00000003576) #26	CREB3L1 (ENSLAFG00000005092) #28	DGKZ (ENSLAFG00000015107) #29	MDK (ENSLAFG00000015119) #30	CHRM4 (ENSLAFG00000026552) #31	ENSLAFG00000030479 #32	ENSLAFG00000015123 #32	HARBI1 (ENSLAFG00000032359) #33	ATG13 (ENSLAFG00000015138) #34	ARHGAP1 (ENSLAFG00000015141) #35	ZNF408 (ENSLAFG00000027848) #36	F2 (ENSLAFG00000010383) #37
Marsupialia	ANCESTRAL SPECIES	7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000164760	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00390000013899.b	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000164059	ENSGT00390000014757	ENSGT00940000158287
Marsupialia_b	ANCESTRAL SPECIES	8	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000164760	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00390000013899.b	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00940000164059	ENSGT00390000014757	ENSGT00940000158287	ENSGT00390000012935
Diprotodontia	ANCESTRAL SPECIES	46	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000164760	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00390000013899.b	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00940000164059	ENSGT00390000014757	ENSGT00940000158287	ENSGT00390000012935
Diprotodontia_a	ANCESTRAL SPECIES	46	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000164760	ENSGT00940000161101 #11	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00390000013899.b	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00940000164059	ENSGT00390000014757	ENSGT00940000158287	ENSGT00390000012935
Common wonbat	MODERN SPECIES	1058	HSD17B12 (ENSVURG00010011495) #7	ALKBH3 (ENSVURG00010011481) #8	C11orf96 (ENSVURG00010011478) #9	ENSVURG00010011462	ACCS (ENSVURG00010011433) #11	EXT2 (ENSVURG00010011405) #12	ALX4 (ENSVURG00010011388) #13	CD82 (ENSVURG00010011375) #14	TSPAN18 (ENSVURG00010011338) #15	TP53I11 (ENSVURG00010011301) #16	PRDM11 (ENSVURG00010011272) #17	SYT13 (ENSVURG00010011263) #18	CHST1 (ENSVURG00010011252) #19	SLC35C1 (ENSVURG00010011245) #20	CRY2 (ENSVURG00010011233) #21	MAPK8IP1 (ENSVURG00010010986) #22	PEX16 (ENSVURG00010010942) #24	LARGE2 (ENSVURG00010010886) #25	PHF21A (ENSVURG00010010860) #26	CREB3L1 (ENSVURG00010010813) #28	DGKZ (ENSVURG00010010658) #29	MDK (ENSVURG00010010613) #30	CHRM4 (ENSVURG00010010600) #31	AMBRA1 (ENSVURG00010010523) #32	HARBI1 (ENSVURG00010010503) #33	ATG13 (ENSVURG00010010461) #34	ARHGAP1 (ENSVURG00010010440) #35	CKAP5 (ENSVURG00010010351)	LRP4 (ENSVURG00010010304)	CSTPP1 (ENSVURG00010010291)	ARFGAP2 (ENSVURG00010010235)
koala	MODERN SPECIES	139	C11orf96 (ENSPCIG00000021797) #9	ENSPCIG00000016360	ENSPCIG00000016363	ACCS (ENSPCIG00000016364) #11	EXT2 (ENSPCIG00000032707) #12	ALX4 (ENSPCIG00000036593) #13	ENSPCIG00000025054 #14	TSPAN18 (ENSPCIG00000025051) #15	ENSPCIG00000025050 #16	PRDM11 (ENSPCIG00000020145) #17	SYT13 (ENSPCIG00000020143) #18	ENSPCIG00000001772	CHST1 (ENSPCIG00000001789) #19	SLC35C1 (ENSPCIG00000020139) #20	CRY2 (ENSPCIG00000020134) #21	MAPK8IP1 (ENSPCIG00000020132) #22	PEX16 (ENSPCIG00000020128) #24	LARGE2 (ENSPCIG00000020123) #25	PHF21A (ENSPCIG00000020119) #26	CREB3L1 (ENSPCIG00000020114) #28	DGKZ (ENSPCIG00000020101) #29	MDK (ENSPCIG00000020100) #30	CHRM4 (ENSPCIG00000020098) #31	AMBRA1 (ENSPCIG00000020093) #32	HARBI1 (ENSPCIG00000020090) #33	ATG13 (ENSPCIG00000020075) #34	ARHGAP1 (ENSPCIG00000020071) #35	ENSPCIG00000020069	CKAP5 (ENSPCIG00000007436)	LRP4 (ENSPCIG00000007330)	CSTPP1 (ENSPCIG00000007328)
Wallaby	MODERN SPECIES	2976																ENSMEUG00000005666 #22	PEX16 (ENSMEUG00000005692) #24
Opossum	MODERN SPECIES	4	ENSMODG00000019866	ENSMODG00000019865	ENSMODG00000019867 #11	EXT2 (ENSMODG00000019868) #12	ALX4 (ENSMODG00000019869) #13	CD82 (ENSMODG00000040483) #14	TSPAN18 (ENSMODG00000019871) #15	TP53I11 (ENSMODG00000019873) #16	PRDM11 (ENSMODG00000019874) #17	ENSMODG00000042658	SYT13 (ENSMODG00000019875) #18	ENSMODG00000019876	CHST1 (ENSMODG00000024450) #19	SLC35C1 (ENSMODG00000019878) #20	CRY2 (ENSMODG00000019881) #21	MAPK8IP1 (ENSMODG00000019877) #22	PEX16 (ENSMODG00000019884) #24	LARGE2 (ENSMODG00000019885) #25	PHF21A (ENSMODG00000019887) #26	ENSMODG00000046087	CREB3L1 (ENSMODG00000019888) #28	CHRM4 (ENSMODG00000019889) #31	AMBRA1 (ENSMODG00000019891) #32	HARBI1 (ENSMODG00000019892) #33	ATG13 (ENSMODG00000019893) #34	ARHGAP1 (ENSMODG00000019894) #35	ZNF408 (ENSMODG00000019895) #36	ENSMODG00000019896	CKAP5 (ENSMODG00000019897)	LRP4 (ENSMODG00000019898)	ENSMODG00000019900
Platypus	MODERN SPECIES	14	ENSOANG00000009210 #7	ALKBH3 (ENSOANG00000009208) #8	ENSOANG00000037961	ACCS (ENSOANG00000040441) #11	EXT2 (ENSOANG00000003194) #12	ALX4 (ENSOANG00000037260) #13	CD82 (ENSOANG00000042613) #14	TSPAN18 (ENSOANG00000038384) #15	TP53I11 (ENSOANG00000042889) #16	PRDM11 (ENSOANG00000011927) #17	SYT13 (ENSOANG00000039954) #18	ENSOANG00000010924	CHST1 (ENSOANG00000051109) #19	SLC35C1 (ENSOANG00000005349) #20	CRY2 (ENSOANG00000005350) #21	MAPK8IP1 (ENSOANG00000038913) #22	ENSOANG00000046338 #23	PEX16 (ENSOANG00000002458) #24	LARGE2 (ENSOANG00000005352) #25	PHF21A (ENSOANG00000005355) #26	CREB3L1 (ENSOANG00000005356) #28	DGKZ (ENSOANG00000003635) #29	MDK (ENSOANG00000037361) #30	CHRM4 (ENSOANG00000045540) #31	AMBRA1 (ENSOANG00000014521) #32	HARBI1 (ENSOANG00000004814) #33	ATG13 (ENSOANG00000006550) #34	ARHGAP1 (ENSOANG00000002770) #35	ENSOANG00000002767	CKAP5 (ENSOANG00000002765)	LRP4 (ENSOANG00000001954)
Sauria	ANCESTRAL SPECIES	3	ENSGT00950000183478	ENSGT00940000164760	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00930000151992	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000164059	ENSGT00390000014757.g	ENSGT00940000158287
Archelosauria	ANCESTRAL SPECIES	2	ENSGT00940000164760	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00930000151992	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161051.b.d	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000164059	ENSGT00390000014757.g	ENSGT00940000158287
Archosauria	ANCESTRAL SPECIES	5	ENSGT00940000164760	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00930000151992	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161051.b.d	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000164059	ENSGT00390000014757.g	ENSGT00940000158287
Aves	ANCESTRAL SPECIES	2	ENSGT00940000154629.B	ENSGT00390000003581	ENSGT00900000141110	ENSGT00390000003855.b	ENSGT00940000157441	ENSGT00940000153635.B	ENSGT00940000157624	ENSGT00940000166137	ENSGT00950000182985.a.a	ENSGT00390000016108	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000164059	ENSGT00390000014757.g	ENSGT00940000158287
Neognathae	ANCESTRAL SPECIES	4	ENSGT00940000154629.B	ENSGT00390000003581	ENSGT00900000141110	ENSGT00390000003855.b	ENSGT00940000157441	ENSGT00940000153635.B	ENSGT00940000157624	ENSGT00940000166137	ENSGT00950000182985.a.a	ENSGT00390000016108	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000164059	ENSGT00390000014757.g	ENSGT00940000158287
Galloanserae	ANCESTRAL SPECIES	4	ENSGT00940000154629.B	ENSGT00390000003581	ENSGT00900000141110	ENSGT00390000003855.b	ENSGT00940000157441	ENSGT00940000153635.B	ENSGT00940000157624	ENSGT00940000166137	ENSGT00950000182985.a.a	ENSGT00390000016108	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000164059	ENSGT00390000014757.g	ENSGT00940000158287
Anatidae	ANCESTRAL SPECIES	26	ENSGT00940000154629.B	ENSGT00390000003581	ENSGT00900000141110	ENSGT00390000003855.b	ENSGT00940000157441	ENSGT00940000153635.B	ENSGT00940000157624	ENSGT00940000166137	ENSGT00950000182985.a.a	ENSGT00390000016108	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000164059	ENSGT00390000014757.g	ENSGT00940000158287
Duck	MODERN SPECIES	3602															CRY2 (ENSAPLG00000004177) #21	MAPK8IP1 (ENSAPLG00000020964) #22	PEX16 (ENSAPLG00000003507) #24
Pink-footed goose	MODERN SPECIES	44	CHP1 (ENSABRG00000015776)	EXD1 (ENSABRG00000015771)	INO80 (ENSABRG00000015764)	CHAC1 (ENSABRG00000015761)	DLL4 (ENSABRG00000015757)	VPS18 (ENSABRG00000015753)	RHOV (ENSABRG00000015752)	ENSABRG00000015746	PPP1R14D (ENSABRG00000015744)	ZFYVE19 (ENSABRG00000015742)	ENSABRG00000015736	ENSABRG00000015723	CHST1 (ENSABRG00000015718) #19	SLC35C1 (ENSABRG00000015713) #20	CRY2 (ENSABRG00000015709) #21	MAPK8IP1 (ENSABRG00000015695) #22	PEX16 (ENSABRG00000015686) #24	LARGE2 (ENSABRG00000015677) #25	PHF21A (ENSABRG00000015666) #26	CREB3L1 (ENSABRG00000015657) #28	DGKZ (ENSABRG00000015580) #29	ENSABRG00000015542 #30	CHRM4 (ENSABRG00000015532) #31	AMBRA1 (ENSABRG00000015319) #32	HARBI1 (ENSABRG00000015289) #33	ATG13 (ENSABRG00000015023) #34	ARHGAP1 (ENSABRG00000014848) #35	ZNF408 (ENSABRG00000014838) #36	ENSABRG00000014826	CKAP5 (ENSABRG00000012270)	LRP4 (ENSABRG00000011397)
Phasianidae	ANCESTRAL SPECIES	4	ENSGT00940000154629.B	ENSGT00390000003581	ENSGT00900000141110	ENSGT00390000003855.b	ENSGT00940000157441	ENSGT00940000153635.B	ENSGT00940000157624	ENSGT00940000166137	ENSGT00950000182985.a.a	ENSGT00390000016108	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00940000164059	ENSGT00390000014757.g	ENSGT00940000158287	ENSGT00960000189374
Japanese quail	MODERN SPECIES	23	OIP5 (ENSCJPG00005014418)	CHP1 (ENSCJPG00005014417)	EXD1 (ENSCJPG00005014416)	INO80 (ENSCJPG00005014328)	CHAC1 (ENSCJPG00005014327)	DLL4 (ENSCJPG00005014326)	VPS18 (ENSCJPG00005014325)	RHOV (ENSCJPG00005014324)	ENSCJPG00005014323	ENSCJPG00005014322	ZFYVE19 (ENSCJPG00005014321)	ENSCJPG00005014320	CHST1 (ENSCJPG00005014319) #19	SLC35C1 (ENSCJPG00005014318) #20	CRY2 (ENSCJPG00005014317) #21	MAPK8IP1 (ENSCJPG00005014316) #22	PEX16 (ENSCJPG00005014314) #24	LARGE2 (ENSCJPG00005014313) #25	PHF21A (ENSCJPG00005013893) #26	CREB3L1 (ENSCJPG00005013892) #28	DGKZ (ENSCJPG00005013891) #29	MDK (ENSCJPG00005013890) #30	CHRM4 (ENSCJPG00005013889) #31	AMBRA1 (ENSCJPG00005013782) #32	HARBI1 (ENSCJPG00005013781) #33	ATG13 (ENSCJPG00005013688) #34	ARHGAP1 (ENSCJPG00005013573) #35	ENSCJPG00005013566	CKAP5 (ENSCJPG00005012374)	LRP4 (ENSCJPG00005012083)	ENSCJPG00005012080
Phasianidae_b	ANCESTRAL SPECIES	3	ENSGT00940000154629.B	ENSGT00390000003581	ENSGT00900000141110	ENSGT00390000003855.b	ENSGT00940000157441	ENSGT00940000153635.B	ENSGT00940000157624	ENSGT00940000166137	ENSGT00950000182985.a.a	ENSGT00390000016108	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00940000164059	ENSGT00390000014757.g	ENSGT00940000158287	ENSGT00390000012935
Chicken	MODERN SPECIES	34	CHP1 (ENSGALG00010022451)	EXD1 (ENSGALG00010022426)	CHAC1 (ENSGALG00010022412)	INO80 (ENSGALG00010022316)	DLL4 (ENSGALG00010022311)	VPS18 (ENSGALG00010022297)	RHOV (ENSGALG00010022246)	SPINT1 (ENSGALG00010022240)	PPP1R14D (ENSGALG00010022220)	ZFYVE19 (ENSGALG00010022209)	ENSGALG00010022201	ENSGALG00010022194	CHST1 (ENSGALG00010022135) #19	SLC35C1 (ENSGALG00010022087) #20	CRY2 (ENSGALG00010022046) #21	MAPK8IP1 (ENSGALG00010022041) #22	C11orf94 (ENSGALG00010022000)	PEX16 (ENSGALG00010021965) #24	ENSGALG00010021962	LARGE2 (ENSGALG00010021848) #25	PHF21A (ENSGALG00010021790) #26	CREB3L1 (ENSGALG00010023217) #28	DGKZ (ENSGALG00010023196) #29	MDK (ENSGALG00010023136) #30	CHRM4 (ENSGALG00010023120) #31	AMBRA1 (ENSGALG00010023866) #32	HARBI1 (ENSGALG00010023083) #33	ATG13 (ENSGALG00010023064) #34	ARHGAP1 (ENSGALG00010022997) #35	F2 (ENSGALG00010022987)	CKAP5 (ENSGALG00010022971)
Turkey	MODERN SPECIES	25	ENSMGAG00000010880	ENSMGAG00000010924	ENSMGAG00000020851	ENSMGAG00000010945 #35	ENSMGAG00000010974 #34	ENSMGAG00000010995 #33	ENSMGAG00000010997 #32	MDK (ENSMGAG00000011008) #30	ENSMGAG00000015803 #31	ENSMGAG00000017332 #32	ENSMGAG00000011016 #29	CREB3L1 (ENSMGAG00000011042) #28	ENSMGAG00000021734 #26	LARGE2 (ENSMGAG00000011066) #25	PHF21A (ENSMGAG00000011052) #26	ENSMGAG00000011085 #22	ENSMGAG00000011076 #24	ENSMGAG00000011088 #21	ENSMGAG00000011099 #20	ENSMGAG00000021832	ENSMGAG00000015808 #19	ENSMGAG00000011107	ENSMGAG00000011125	ZFYVE19 (ENSMGAG00000011119)	ENSMGAG00000011131	ENSMGAG00000011126	VPS18 (ENSMGAG00000011138)	ENSMGAG00000011145	ENSMGAG00000011164	ENSMGAG00000011179	CHP1 (ENSMGAG00000011182)
Neognathae_b	ANCESTRAL SPECIES	6	ENSGT00940000154629.B	ENSGT00390000003581	ENSGT00900000141110	ENSGT00390000003855.b	ENSGT00940000157441	ENSGT00940000153635.B	ENSGT00940000157624	ENSGT00940000166137	ENSGT00950000182985.a.a	ENSGT00390000016108	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000164059	ENSGT00390000014757.g	ENSGT00940000158287
Passeriformes	ANCESTRAL SPECIES	5	ENSGT00940000154267.A	ENSGT00940000154629.B	ENSGT00900000141110	ENSGT00390000003855.b	ENSGT00940000157441	ENSGT00940000153635.B	ENSGT00940000157624	ENSGT00940000166137	ENSGT00950000182985.a.a	ENSGT00390000016108	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00940000164059	ENSGT00390000014757.g	ENSGT00940000158287	ENSGT00960000189374
Great tit	MODERN SPECIES	25	NUSAP1 (ENSPMJG00000014408)	OIP5 (ENSPMJG00000014399)	CHP1 (ENSPMJG00000014398)	INO80 (ENSPMJG00000014395)	CHAC1 (ENSPMJG00000014394)	DLL4 (ENSPMJG00000014392)	VPS18 (ENSPMJG00000014390)	RHOV (ENSPMJG00000014388)	ENSPMJG00000014387	ZFYVE19 (ENSPMJG00000014386)	ENSPMJG00000014385	ENSPMJG00000014384	CHST1 (ENSPMJG00000014383) #19	ENSPMJG00000014382	CRY2 (ENSPMJG00000014381) #21	MAPK8IP1 (ENSPMJG00000014380) #22	PEX16 (ENSPMJG00000014379) #24	LARGE2 (ENSPMJG00000014378) #25	PHF21A (ENSPMJG00000014377) #26	CREB3L1 (ENSPMJG00000014375) #28	DGKZ (ENSPMJG00000014374) #29	MDK (ENSPMJG00000014373) #30	CHRM4 (ENSPMJG00000014372) #31	AMBRA1 (ENSPMJG00000013872) #32	HARBI1 (ENSPMJG00000013871) #33	ATG13 (ENSPMJG00000013870) #34	ARHGAP1 (ENSPMJG00000013679) #35	ENSPMJG00000013670	CKAP5 (ENSPMJG00000012334)	LRP4 (ENSPMJG00000012302)	ENSPMJG00000012301
Passeriformes_d	ANCESTRAL SPECIES	5	ENSGT00940000154267.A	ENSGT00940000154629.B	ENSGT00900000141110	ENSGT00390000003855.b	ENSGT00940000157441	ENSGT00940000153635.B	ENSGT00940000157624	ENSGT00940000166137	ENSGT00950000182985.a.a	ENSGT00390000016108	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00940000164059	ENSGT00390000014757.g	ENSGT00940000158287	ENSGT00960000189374
Flycatcher	MODERN SPECIES	24	ENSFALG00000026284	CHP1 (ENSFALG00000023422)	INO80 (ENSFALG00000006125)	CHAC1 (ENSFALG00000006130)	DLL4 (ENSFALG00000006133)	VPS18 (ENSFALG00000006138)	RHOV (ENSFALG00000006141)	ENSFALG00000006144	ENSFALG00000026148	PPP1R14D (ENSFALG00000024489)	ZFYVE19 (ENSFALG00000026694)	ENSFALG00000006163	ENSFALG00000014198	CHST1 (ENSFALG00000014200) #19	CRY2 (ENSFALG00000006176) #21	MAPK8IP1 (ENSFALG00000006196) #22	PEX16 (ENSFALG00000025565) #24	LARGE2 (ENSFALG00000006222) #25	PHF21A (ENSFALG00000006238) #26	CREB3L1 (ENSFALG00000006242) #28	DGKZ (ENSFALG00000006244) #29	MDK (ENSFALG00000006248) #30	CHRM4 (ENSFALG00000014204) #31	AMBRA1 (ENSFALG00000006252) #32	HARBI1 (ENSFALG00000028036) #33	ATG13 (ENSFALG00000006261) #34	ARHGAP1 (ENSFALG00000006265) #35	ENSFALG00000006272	CKAP5 (ENSFALG00000006282)	LRP4 (ENSFALG00000006286)	ENSFALG00000025106
Passeriformes_g	ANCESTRAL SPECIES		ENSGT00940000154267.A	ENSGT00940000154629.B	ENSGT00900000141110	ENSGT00390000003855.b	ENSGT00940000157441	ENSGT00940000153635.B	ENSGT00940000157624	ENSGT00940000166137	ENSGT00950000182985.a.a	ENSGT00390000016108	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00940000164059	ENSGT00390000014757.g	ENSGT00940000158287	ENSGT00390000012935
Medium ground finch	MODERN SPECIES	15	ENSGFOG00000002210	CHP1 (ENSGFOG00000002223)	ENSGFOG00000002236	INO80 (ENSGFOG00000002244)	CHAC1 (ENSGFOG00000002253)	DLL4 (ENSGFOG00000002266)	VPS18 (ENSGFOG00000002282)	RHOV (ENSGFOG00000002290)	ENSGFOG00000002296	ENSGFOG00000002316	ZFYVE19 (ENSGFOG00000002326)	ENSGFOG00000002356	ENSGFOG00000002380	CHST1 (ENSGFOG00000002388) #19	CRY2 (ENSGFOG00000002417) #21	MAPK8IP1 (ENSGFOG00000002521) #22	PEX16 (ENSGFOG00000002552) #24	LARGE2 (ENSGFOG00000002573) #25	PHF21A (ENSGFOG00000002605) #26	CREB3L1 (ENSGFOG00000000033) #28	DGKZ (ENSGFOG00000000238) #29	MDK (ENSGFOG00000005000) #30	CHRM4 (ENSGFOG00000005010) #31	AMBRA1 (ENSGFOG00000005019) #32	HARBI1 (ENSGFOG00000005030) #33	ATG13 (ENSGFOG00000005043) #34	ARHGAP1 (ENSGFOG00000005074) #35	ENSGFOG00000005094	CKAP5 (ENSGFOG00000005139)	LRP4 (ENSGFOG00000005261)	CSTPP1 (ENSGFOG00000005426)
Passeroidea	ANCESTRAL SPECIES	1	ENSGT00940000154267.A	ENSGT00940000154629.B	ENSGT00900000141110	ENSGT00390000003855.b	ENSGT00940000157441	ENSGT00940000153635.B	ENSGT00940000157624	ENSGT00940000166137	ENSGT00950000182985.a.a	ENSGT00390000016108	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00940000164059	ENSGT00390000014757.g	ENSGT00940000158287	ENSGT00390000012935
Zebra finch	MODERN SPECIES	27	ENSTGUG00000020477	CHP1 (ENSTGUG00000010812)	CHAC1 (ENSTGUG00000026755)	INO80 (ENSTGUG00000010786)	DLL4 (ENSTGUG00000010777)	VPS18 (ENSTGUG00000010775)	RHOV (ENSTGUG00000010772)	ENSTGUG00000010764	PPP1R14D (ENSTGUG00000021458)	ZFYVE19 (ENSTGUG00000010756)	ENSTGUG00000010750	ENSTGUG00000027093	CHST1 (ENSTGUG00000010745) #19	SLC35C1 (ENSTGUG00000010741) #20	CRY2 (ENSTGUG00000010722) #21	MAPK8IP1 (ENSTGUG00000010712) #22	PEX16 (ENSTGUG00000010706) #24	LARGE2 (ENSTGUG00000010689) #25	PHF21A (ENSTGUG00000010680) #26	CREB3L1 (ENSTGUG00000010669) #28	DGKZ (ENSTGUG00000010647) #29	MDK (ENSTGUG00000010641) #30	CHRM4 (ENSTGUG00000010635) #31	AMBRA1 (ENSTGUG00000010628) #32	HARBI1 (ENSTGUG00000010627) #33	ATG13 (ENSTGUG00000010603) #34	ARHGAP1 (ENSTGUG00000010593) #35	ENSTGUG00000010580	CKAP5 (ENSTGUG00000023569)	LRP4 (ENSTGUG00000010533)	CSTPP1 (ENSTGUG00000010527)
Common canary	MODERN SPECIES	3	ENSSCAG00000002502	CHP1 (ENSSCAG00000002509)	INO80 (ENSSCAG00000002520)	CHAC1 (ENSSCAG00000002530)	DLL4 (ENSSCAG00000002541)	VPS18 (ENSSCAG00000002552)	RHOV (ENSSCAG00000002561)	ENSSCAG00000002568	ENSSCAG00000002575	ZFYVE19 (ENSSCAG00000002580)	ENSSCAG00000002589	ENSSCAG00000002593	CHST1 (ENSSCAG00000002594) #19	SLC35C1 (ENSSCAG00000002601) #20	CRY2 (ENSSCAG00000002603) #21	MAPK8IP1 (ENSSCAG00000002608) #22	PEX16 (ENSSCAG00000002612) #24	ENSSCAG00000002614	LARGE2 (ENSSCAG00000002619) #25	PHF21A (ENSSCAG00000002624) #26	CREB3L1 (ENSSCAG00000002634) #28	DGKZ (ENSSCAG00000002643) #29	MDK (ENSSCAG00000002680) #30	CHRM4 (ENSSCAG00000002686) #31	AMBRA1 (ENSSCAG00000002743) #32	HARBI1 (ENSSCAG00000002978) #33	ATG13 (ENSSCAG00000002981) #34	ARHGAP1 (ENSSCAG00000002990) #35	ENSSCAG00000003007	CKAP5 (ENSSCAG00000003039)	LRP4 (ENSSCAG00000003129)
Neognathae_c	ANCESTRAL SPECIES	6	ENSGT00940000154629.B	ENSGT00390000003581	ENSGT00900000141110	ENSGT00390000003855.b	ENSGT00940000157441	ENSGT00940000153635.B	ENSGT00940000157624	ENSGT00940000166137	ENSGT00950000182985.a.a	ENSGT00390000016108	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000164059	ENSGT00390000014757.g	ENSGT00940000158287
Golden eagle	MODERN SPECIES	11	EXD1 (ENSACCG00020007115)	INO80 (ENSACCG00020007139)	CHAC1 (ENSACCG00020007162)	DLL4 (ENSACCG00020007171)	VPS18 (ENSACCG00020007188)	RHOV (ENSACCG00020007200)	ENSACCG00020007210	ENSACCG00020007226	ZFYVE19 (ENSACCG00020007236)	ENSACCG00020007249	ENSACCG00020007270	CHST1 (ENSACCG00020007275) #19	ENSACCG00020007301	SLC35C1 (ENSACCG00020007307) #20	CRY2 (ENSACCG00020007326) #21	MAPK8IP1 (ENSACCG00020007363) #22	PEX16 (ENSACCG00020007429) #24	LARGE2 (ENSACCG00020007454) #25	PHF21A (ENSACCG00020007479) #26	CREB3L1 (ENSACCG00020007513) #28	DGKZ (ENSACCG00020007561) #29	MDK (ENSACCG00020007651) #30	CHRM4 (ENSACCG00020007659) #31	AMBRA1 (ENSACCG00020007670) #32	HARBI1 (ENSACCG00020007689) #33	ATG13 (ENSACCG00020007724) #34	ARHGAP1 (ENSACCG00020007772) #35	ZNF408 (ENSACCG00020007780) #36	ENSACCG00020007794	CKAP5 (ENSACCG00020007836)	LRP4 (ENSACCG00020008390)
Kakapo	MODERN SPECIES	21	CHP1 (ENSSHBG00005004252)	EXD1 (ENSSHBG00005004239)	INO80 (ENSSHBG00005004213)	CHAC1 (ENSSHBG00005004189)	DLL4 (ENSSHBG00005004174)	VPS18 (ENSSHBG00005004165)	RHOV (ENSSHBG00005004155)	ENSSHBG00005004144	PPP1R14D (ENSSHBG00005004135)	ZFYVE19 (ENSSHBG00005004125)	ENSSHBG00005004111	ENSSHBG00005004102	CHST1 (ENSSHBG00005004094) #19	SLC35C1 (ENSSHBG00005004078) #20	CRY2 (ENSSHBG00005004067) #21	MAPK8IP1 (ENSSHBG00005004053) #22	PEX16 (ENSSHBG00005004041) #24	LARGE2 (ENSSHBG00005004024) #25	PHF21A (ENSSHBG00005004004) #26	CREB3L1 (ENSSHBG00005003978) #28	DGKZ (ENSSHBG00005003935) #29	MDK (ENSSHBG00005003898) #30	CHRM4 (ENSSHBG00005003882) #31	AMBRA1 (ENSSHBG00005003842) #32	HARBI1 (ENSSHBG00005003802) #33	ATG13 (ENSSHBG00005003785) #34	ARHGAP1 (ENSSHBG00005003766) #35	ENSSHBG00005003750	CKAP5 (ENSSHBG00005003723)	LRP4 (ENSSHBG00005003580)	CSTPP1 (ENSSHBG00005003475)
African ostrich	MODERN SPECIES	958	NUSAP1 (ENSSCUG00000017633)	CHP1 (ENSSCUG00000017632)	EXD1 (ENSSCUG00000017631)	INO80 (ENSSCUG00000017629)	CHAC1 (ENSSCUG00000017628)	DLL4 (ENSSCUG00000017626)	VPS18 (ENSSCUG00000017624)	RHOV (ENSSCUG00000017623)	ENSSCUG00000017621	ENSSCUG00000017620	ZFYVE19 (ENSSCUG00000017619)	ENSSCUG00000017618	ENSSCUG00000017617	CHST1 (ENSSCUG00000017615) #19	CRY2 (ENSSCUG00000017614) #21	MAPK8IP1 (ENSSCUG00000017613) #22	PEX16 (ENSSCUG00000017612) #24	LARGE2 (ENSSCUG00000017610) #25	PHF21A (ENSSCUG00000017608) #26	CREB3L1 (ENSSCUG00000017607) #28	DGKZ (ENSSCUG00000017605) #29	MDK (ENSSCUG00000017601) #30	CHRM4 (ENSSCUG00000017599) #31	AMBRA1 (ENSSCUG00000017598) #32	HARBI1 (ENSSCUG00000017597) #33	ATG13 (ENSSCUG00000017596) #34	ARHGAP1 (ENSSCUG00000017595) #35	ZNF408 (ENSSCUG00000017594) #36
Australian saltwater crocodile	MODERN SPECIES	64	ENSCPRG00005011338	EXT2 (ENSCPRG00005011390) #12	ALX4 (ENSCPRG00005011563) #13	CD82 (ENSCPRG00005011637) #14	TSPAN18 (ENSCPRG00005011666) #15	TP53I11 (ENSCPRG00005011670) #16	PRDM11 (ENSCPRG00005011712) #17	SYT13 (ENSCPRG00005011716) #18	ENSCPRG00005011755	ENSCPRG00005011758	ENSCPRG00005011761	ENSCPRG00005011790	CHST1 (ENSCPRG00005011793) #19	SLC35C1 (ENSCPRG00005011817) #20	CRY2 (ENSCPRG00005011818) #21	MAPK8IP1 (ENSCPRG00005011827) #22	PEX16 (ENSCPRG00005011836) #24	LARGE2 (ENSCPRG00005011840) #25	PHF21A (ENSCPRG00005011871) #26	CREB3L1 (ENSCPRG00005011938) #28	ENSCPRG00005011946	DGKZ (ENSCPRG00005012247) #29	MDK (ENSCPRG00005013793) #30	CHRM4 (ENSCPRG00005013799) #31	AMBRA1 (ENSCPRG00005013805) #32	HARBI1 (ENSCPRG00005013808) #33	ATG13 (ENSCPRG00005013813) #34	ARHGAP1 (ENSCPRG00005013849) #35	ZNF408 (ENSCPRG00005013908) #36	ENSCPRG00005013914	CKAP5 (ENSCPRG00005014039)
Cryptodira	ANCESTRAL SPECIES	3	ENSGT00950000183478	ENSGT00940000164760	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161051.b.d.a	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000164059	ENSGT00390000014757.g	ENSGT00940000158287
Testudinoidea	ANCESTRAL SPECIES	3	ENSGT00940000164760	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161051.b.d.a	ENSGT00940000161051.b.e	ENSGT00940000161051.b.d.b	ENSGT00390000013899.b	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000164059	ENSGT00390000014757.g	ENSGT00940000158287
Emydidae	ANCESTRAL SPECIES	2	ENSGT00940000164760	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161051.b.d.a	ENSGT00940000161051.b.e	ENSGT00940000161051.b.d.b	ENSGT00390000013899.b	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000164059	ENSGT00390000014757.g	ENSGT00940000158287
painted turtle	MODERN SPECIES	13	ENSCPBG00000012580	EXT2 (ENSCPBG00000012585) #12	ALX4 (ENSCPBG00000012590) #13	CD82 (ENSCPBG00000012593) #14	TSPAN18 (ENSCPBG00000012596) #15	TP53I11 (ENSCPBG00000012600) #16	PRDM11 (ENSCPBG00000012601) #17	SYT13 (ENSCPBG00000012602) #18	ENSCPBG00000012603	ENSCPBG00000012605	ENSCPBG00000012607	ENSCPBG00000012613	CHST1 (ENSCPBG00000012615) #19	SLC35C1 (ENSCPBG00000012617) #20	CRY2 (ENSCPBG00000012619) #21	MAPK8IP1 (ENSCPBG00000012622) #22	PEX16 (ENSCPBG00000012625) #24	LARGE2 (ENSCPBG00000012627) #25	PHF21A (ENSCPBG00000012630) #26	CREB3L1 (ENSCPBG00000012636) #28	DGKZ (ENSCPBG00000012640) #29	MDK (ENSCPBG00000012660) #30	CHRM4 (ENSCPBG00000012662) #31	AMBRA1 (ENSCPBG00000012667) #32	HARBI1 (ENSCPBG00000012670) #33	ATG13 (ENSCPBG00000012673) #34	ARHGAP1 (ENSCPBG00000012676) #35	ZNF408 (ENSCPBG00000012683) #36	ENSCPBG00000012688	CKAP5 (ENSCPBG00000012821)	LRP4 (ENSCPBG00000015397)
Three-toed box turtle	MODERN SPECIES	40	C11orf96 (ENSTMTG00000009151) #9	ENSTMTG00000009155	EXT2 (ENSTMTG00000009184) #12	ALX4 (ENSTMTG00000009213) #13	CD82 (ENSTMTG00000000072) #14	TSPAN18 (ENSTMTG00000000107) #15	TP53I11 (ENSTMTG00000000133) #16	PRDM11 (ENSTMTG00000000166) #17	SYT13 (ENSTMTG00000000209) #18	ENSTMTG00000000261	ENSTMTG00000000324	ENSTMTG00000000366	CHST1 (ENSTMTG00000000417) #19	SLC35C1 (ENSTMTG00000000435) #20	CRY2 (ENSTMTG00000000450) #21	MAPK8IP1 (ENSTMTG00000000485) #22	PEX16 (ENSTMTG00000000523) #24	LARGE2 (ENSTMTG00000000547) #25	PHF21A (ENSTMTG00000000574) #26	CREB3L1 (ENSTMTG00000000596) #28	DGKZ (ENSTMTG00000000674) #29	MDK (ENSTMTG00000000793) #30	CHRM4 (ENSTMTG00000000807) #31	AMBRA1 (ENSTMTG00000000819) #32	HARBI1 (ENSTMTG00000000846) #33	ATG13 (ENSTMTG00000000864) #34	ARHGAP1 (ENSTMTG00000000921) #35	ENSTMTG00000000932	ENSTMTG00000000941	CKAP5 (ENSTMTG00000000970)	LRP4 (ENSTMTG00000001223)
Testudinidae	ANCESTRAL SPECIES	2	ENSGT00940000164760	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161051.b.d.a	ENSGT00940000161051.b.e	ENSGT00940000161051.b.d.b	ENSGT00390000013899.b	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000164059	ENSGT00390000014757.g.c	ENSGT00940000158287
Abingdon island giant tortoise	MODERN SPECIES	401											ENSCABG00000013755	ENSCABG00000013753	CHST1 (ENSCABG00000013752) #19	SLC35C1 (ENSCABG00000013747) #20	CRY2 (ENSCABG00000013745) #21	MAPK8IP1 (ENSCABG00000013742) #22	PEX16 (ENSCABG00000013740) #24	LARGE2 (ENSCABG00000013738) #25	PHF21A (ENSCABG00000013619) #26	CREB3L1 (ENSCABG00000013591) #28	DGKZ (ENSCABG00000010486) #29	MDK (ENSCABG00000010413) #30	CHRM4 (ENSCABG00000010411) #31	AMBRA1 (ENSCABG00000010410) #32	HARBI1 (ENSCABG00000010409) #33	ATG13 (ENSCABG00000010407) #34	ARHGAP1 (ENSCABG00000010406) #35	ZNF408 (ENSCABG00000010405) #36	ENSCABG00000010404	ENSCABG00000010356
Goode s thornscrub tortoise	MODERN SPECIES	18	ENSGEVG00005014034	EXT2 (ENSGEVG00005013950) #12	ALX4 (ENSGEVG00005013888) #13	CD82 (ENSGEVG00005013867) #14	TSPAN18 (ENSGEVG00005013791) #15	TP53I11 (ENSGEVG00005013726) #16	PRDM11 (ENSGEVG00005013687) #17	SYT13 (ENSGEVG00005013529) #18	ENSGEVG00005013341	ENSGEVG00005013168	ENSGEVG00005012968	ENSGEVG00005012924	CHST1 (ENSGEVG00005012904) #19	SLC35C1 (ENSGEVG00005012889) #20	CRY2 (ENSGEVG00005012859) #21	MAPK8IP1 (ENSGEVG00005012653) #22	PEX16 (ENSGEVG00005012603) #24	LARGE2 (ENSGEVG00005012556) #25	PHF21A (ENSGEVG00005012493) #26	CREB3L1 (ENSGEVG00005012256) #28	DGKZ (ENSGEVG00005011914) #29	MDK (ENSGEVG00005011735) #30	CHRM4 (ENSGEVG00005011709) #31	AMBRA1 (ENSGEVG00005011573) #32	HARBI1 (ENSGEVG00005011393) #33	ATG13 (ENSGEVG00005011349) #34	ARHGAP1 (ENSGEVG00005011311) #35	ZNF408 (ENSGEVG00005011280) #36	ENSGEVG00005011016	CKAP5 (ENSGEVG00005010815)	LRP4 (ENSGEVG00005010404)
Chinese turtle	MODERN SPECIES	1173	ENSPSIG00000011971	EXT2 (ENSPSIG00000012310) #12	ALX4 (ENSPSIG00000012524) #13	CD82 (ENSPSIG00000012591) #14	TSPAN18 (ENSPSIG00000012726) #15	TP53I11 (ENSPSIG00000012730) #16	ENSPSIG00000012784 #17	ENSPSIG00000001826 #17	SYT13 (ENSPSIG00000012824) #18	ENSPSIG00000012857	ENSPSIG00000012922	ENSPSIG00000001830	CHST1 (ENSPSIG00000001832) #19	SLC35C1 (ENSPSIG00000012962) #20	CRY2 (ENSPSIG00000012972) #21	MAPK8IP1 (ENSPSIG00000013107) #22	PEX16 (ENSPSIG00000013249) #24	LARGE2 (ENSPSIG00000013334) #25	PHF21A (ENSPSIG00000013428) #26
Lepidosauria	ANCESTRAL SPECIES	10	ENSGT00950000183478	ENSGT00940000164760	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481 #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00930000151992	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000164059	ENSGT00390000014757.g	ENSGT00940000158287
Episquamata	ANCESTRAL SPECIES		ENSGT00950000183478	ENSGT00940000164760	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481.g #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00930000151992	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000164059	ENSGT00390000014757.g	ENSGT00940000158287
Laterata	ANCESTRAL SPECIES	2	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000164760	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481.g #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161051.b.e	ENSGT00390000013899.b	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000164059	ENSGT00390000014757.g	ENSGT00940000158287
Common wall lizard	MODERN SPECIES		C11orf96 (ENSPMRG00000014805) #9	ENSPMRG00000014791	EXT2 (ENSPMRG00000014776) #12	ALX4 (ENSPMRG00000014763) #13	CD82 (ENSPMRG00000014744) #14	ENSPMRG00000014731	TSPAN18 (ENSPMRG00000014727) #15	TP53I11 (ENSPMRG00000014716) #16	PRDM11 (ENSPMRG00000014709) #17	SYT13 (ENSPMRG00000014700) #18	ENSPMRG00000014692	ENSPMRG00000014684	CHST1 (ENSPMRG00000014681) #19	SLC35C1 (ENSPMRG00000014679) #20	CRY2 (ENSPMRG00000014673) #21	MAPK8IP1 (ENSPMRG00000014660) #22	PEX16 (ENSPMRG00000014649) #24	LARGE2 (ENSPMRG00000014630) #25	PHF21A (ENSPMRG00000014609) #26	CREB3L1 (ENSPMRG00000014591) #28	DGKZ (ENSPMRG00000012726) #29	ENSPMRG00000012478	MDK (ENSPMRG00000012465) #30	CHRM4 (ENSPMRG00000012456) #31	AMBRA1 (ENSPMRG00000012441) #32	HARBI1 (ENSPMRG00000012436) #33	ATG13 (ENSPMRG00000012377) #34	ARHGAP1 (ENSPMRG00000012280) #35	ZNF408 (ENSPMRG00000012272) #36	ENSPMRG00000012267	CKAP5 (ENSPMRG00000012212)
Argentine black and white tegu	MODERN SPECIES	3	ENSSMRG00000005022	EXT2 (ENSSMRG00000005057) #12	ALX4 (ENSSMRG00000005074) #13	ENSSMRG00000005121	ENSSMRG00000005130 #14	ENSSMRG00000005143	TSPAN18 (ENSSMRG00000005149) #15	TP53I11 (ENSSMRG00000005157) #16	PRDM11 (ENSSMRG00000005163) #17	SYT13 (ENSSMRG00000005208) #18	ENSSMRG00000005354	ENSSMRG00000005379	CHST1 (ENSSMRG00000005418) #19	SLC35C1 (ENSSMRG00000005444) #20	CRY2 (ENSSMRG00000005452) #21	MAPK8IP1 (ENSSMRG00000005458) #22	PEX16 (ENSSMRG00000005465) #24	LARGE2 (ENSSMRG00000005495) #25	PHF21A (ENSSMRG00000005500) #26	CREB3L1 (ENSSMRG00000005539) #28	DGKZ (ENSSMRG00000005548) #29	MDK (ENSSMRG00000005607) #30	CHRM4 (ENSSMRG00000005613) #31	AMBRA1 (ENSSMRG00000005709) #32	HARBI1 (ENSSMRG00000005723) #33	ATG13 (ENSSMRG00000005818) #34	ARHGAP1 (ENSSMRG00000005826) #35	ZNF408 (ENSSMRG00000005829) #36	ENSSMRG00000005831	CKAP5 (ENSSMRG00000005833)	LRP4 (ENSSMRG00000005929)
Toxicofera	ANCESTRAL SPECIES	5	ENSGT00390000016821 #9	ENSGT00950000183478	ENSGT00940000164760	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481.g #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00930000151992	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161051.b.e	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000164059	ENSGT00390000014757.g	ENSGT00940000158287
Elapidae	ANCESTRAL SPECIES	3	ENSGT00390000016821 #9	ENSGT00950000183478	ENSGT00940000164760	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481.g #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00930000151992	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161051.b.e	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00940000164059	ENSGT00930000151062 #36	ENSGT00390000014757.g	ENSGT00940000158287
Elapidae_a	ANCESTRAL SPECIES	4	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000164760	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481.g #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161051.b.e	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00940000164059	ENSGT00390000014757.g	ENSGT00940000158287	ENSGT00960000189374
Acanthophiinae	ANCESTRAL SPECIES	6	ENSGT00940000154860 #7	ENSGT00940000157226 #8	ENSGT00390000016821 #9	ENSGT00940000164760	ENSGT00940000156620 #12	ENSGT00940000159662 #13	ENSGT00940000158481.g #14	ENSGT00940000157667 #15	ENSGT00390000017249 #16	ENSGT00940000159837 #17	ENSGT00940000160226 #18	ENSGT00940000161051.b.e	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT00940000160630 #35	ENSGT00940000164059	ENSGT00390000014757.g	ENSGT00940000158287	ENSGT00960000189374
Eastern brown snake	MODERN SPECIES	1	ENSPTXG00000008689	ALKBH3 (ENSPTXG00000008690) #8	C11orf96 (ENSPTXG00000008691) #9	ENSPTXG00000008692	EXT2 (ENSPTXG00000008693) #12	ALX4 (ENSPTXG00000008695) #13	ENSPTXG00000008696 #14	TSPAN18 (ENSPTXG00000008697) #15	TP53I11 (ENSPTXG00000008698) #16	PRDM11 (ENSPTXG00000008699) #17	SYT13 (ENSPTXG00000008700) #18	ENSPTXG00000008705	CHST1 (ENSPTXG00000008707) #19	SLC35C1 (ENSPTXG00000008708) #20	CRY2 (ENSPTXG00000008709) #21	MAPK8IP1 (ENSPTXG00000008710) #22	PEX16 (ENSPTXG00000008712) #24	LARGE2 (ENSPTXG00000008713) #25	PHF21A (ENSPTXG00000008714) #26	CREB3L1 (ENSPTXG00000008716) #28	DGKZ (ENSPTXG00000008729) #29	MDK (ENSPTXG00000011934) #30	CHRM4 (ENSPTXG00000011936) #31	AMBRA1 (ENSPTXG00000011938) #32	HARBI1 (ENSPTXG00000011941) #33	ATG13 (ENSPTXG00000011942) #34	ARHGAP1 (ENSPTXG00000011944) #35	ENSPTXG00000011946	CKAP5 (ENSPTXG00000011950)	LRP4 (ENSPTXG00000011966)	CSTPP1 (ENSPTXG00000011967)
Mainland tiger snake	MODERN SPECIES	36										PRDM11 (ENSNSUG00000018417) #17	SYT13 (ENSNSUG00000018415) #18	ENSNSUG00000018414	CHST1 (ENSNSUG00000018413) #19	SLC35C1 (ENSNSUG00000018411) #20	CRY2 (ENSNSUG00000018400) #21	MAPK8IP1 (ENSNSUG00000018399) #22	PEX16 (ENSNSUG00000018398) #24	LARGE2 (ENSNSUG00000018294) #25	PHF21A (ENSNSUG00000018220) #26	CREB3L1 (ENSNSUG00000018219) #28	DGKZ (ENSNSUG00000017845) #29	MDK (ENSNSUG00000017844) #30	CHRM4 (ENSNSUG00000017843) #31	AMBRA1 (ENSNSUG00000017836) #32	HARBI1 (ENSNSUG00000017831) #33	ATG13 (ENSNSUG00000017819) #34	ARHGAP1 (ENSNSUG00000017818) #35	ENSNSUG00000017817	CKAP5 (ENSNSUG00000017815)	LRP4 (ENSNSUG00000017814)	ENSNSUG00000017813
Blue-lipped sea krait	MODERN SPECIES	1420																MAPK8IP1 (ENSLLTG00000002287) #22
Indian cobra	MODERN SPECIES		ENSNNAG00000010340	ENSNNAG00000010452	EXT2 (ENSNNAG00000010463) #12	ALX4 (ENSNNAG00000010499) #13	ENSNNAG00000010552 #14	TSPAN18 (ENSNNAG00000010573) #15	ENSNNAG00000010595 #16	PRDM11 (ENSNNAG00000010628) #17	ENSNNAG00000010688	SYT13 (ENSNNAG00000010715) #18	ENSNNAG00000010840	CHST1 (ENSNNAG00000010881) #19	ENSNNAG00000010894	SLC35C1 (ENSNNAG00000010949) #20	CRY2 (ENSNNAG00000010955) #21	MAPK8IP1 (ENSNNAG00000011005) #22	PEX16 (ENSNNAG00000011154) #24	LARGE2 (ENSNNAG00000011188) #25	PHF21A (ENSNNAG00000011244) #26	ENSNNAG00000011351	CREB3L1 (ENSNNAG00000011364) #28	DGKZ (ENSNNAG00000011459) #29	MDK (ENSNNAG00000011865) #30	CHRM4 (ENSNNAG00000011899) #31	AMBRA1 (ENSNNAG00000011933) #32	HARBI1 (ENSNNAG00000012072) #33	ATG13 (ENSNNAG00000012104) #34	ARHGAP1 (ENSNNAG00000012386) #35	ENSNNAG00000012433	ENSNNAG00000012596 #36	CKAP5 (ENSNNAG00000012822)
Lizard	MODERN SPECIES		ENSACAG00000014115	EXT2 (ENSACAG00000014199) #12	ALX4 (ENSACAG00000014352) #13	ENSACAG00000036806	ENSACAG00000014373 #14	ENSACAG00000036339	TSPAN18 (ENSACAG00000014461) #15	TP53I11 (ENSACAG00000014509) #16	PRDM11 (ENSACAG00000014563) #17	SYT13 (ENSACAG00000014581) #18	ENSACAG00000014622	CHST1 (ENSACAG00000014634) #19	ENSACAG00000044872	SLC35C1 (ENSACAG00000014640) #20	CRY2 (ENSACAG00000014653) #21	MAPK8IP1 (ENSACAG00000014739) #22	ENSACAG00000038905	PEX16 (ENSACAG00000014815) #24	LARGE2 (ENSACAG00000014896) #25	PHF21A (ENSACAG00000014978) #26	ENSACAG00000034992	ENSACAG00000038358	LRRC4C (ENSACAG00000000801)	ENSACAG00000041329	ENSACAG00000017340	ENSACAG00000044077	ENSACAG00000043186	ENSACAG00000037113	ENSACAG00000044901	ENSACAG00000036473	ENSACAG00000042381
tuatara	MODERN SPECIES	1197											ENSSPUG00000002022 #17	SYT13 (ENSSPUG00000002034) #18	ENSSPUG00000002149	ENSSPUG00000002168	CRY2 (ENSSPUG00000002225) #21	MAPK8IP1 (ENSSPUG00000002232) #22	PEX16 (ENSSPUG00000002257) #24	LARGE2 (ENSSPUG00000002318) #25	PHF21A (ENSSPUG00000002397) #26	CREB3L1 (ENSSPUG00000003053) #28	DGKZ (ENSSPUG00000003133) #29	MDK (ENSSPUG00000003220) #30	CHRM4 (ENSSPUG00000003226) #31	AMBRA1 (ENSSPUG00000003231) #32	HARBI1 (ENSSPUG00000003237) #33	ATG13 (ENSSPUG00000003280) #34	ARHGAP1 (ENSSPUG00000003553) #35	ZNF408 (ENSSPUG00000003559) #36	ENSSPUG00000003565	CKAP5 (ENSSPUG00000003628)	LRP4 (ENSSPUG00000003709)
Anura	ANCESTRAL SPECIES	75											ENSGT00940000161051.b.f.a.a.a.a.b	ENSGT00390000013899.b	ENSGT00940000161262 #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000017790 #24	ENSGT00940000158758 #25	ENSGT00940000156124 #26	ENSGT00940000159848 #28	ENSGT00940000156152 #29	ENSGT00390000007640.b #30	ENSGT00940000160394.a #31	ENSGT00390000016223 #32	ENSGT00940000154348.c.b.a #33	ENSGT00390000007055 #34	ENSGT01030000234629.E.b	ENSGT00940000160630 #35	ENSGT00930000151062 #36	ENSGT00940000164059	ENSGT00390000014757
Frog	MODERN SPECIES	4	fadd (ENSXETG00000045881)	ccnd1 (ENSXETG00000045695)	ENSXETG00000044323	ENSXETG00000044016	astl2g (ENSXETG00000000918)	astl2f (ENSXETG00000044182)	nadsyn1 (ENSXETG00000031760)	ENSXETG00000040697	astl2d.1 (ENSXETG00000048123)	tll1 (ENSXETG00000000956)	astl2b (ENSXETG00000025500)	astl2a (ENSXETG00000040205)	chst1 (ENSXETG00000001015) #19	slc35c1 (ENSXETG00000036219) #20	cry2 (ENSXETG00000001023) #21	mapk8ip1 (ENSXETG00000001025) #22	pex16 (ENSXETG00000001027) #24	large2 (ENSXETG00000001028) #25	phf21a (ENSXETG00000001031) #26	creb3l1 (ENSXETG00000031075) #28	dgkz (ENSXETG00000001956) #29	mdk (ENSXETG00000001967) #30	ENSXETG00000044898	chrm4 (ENSXETG00000046229) #31	ENSXETG00000047322	ambra1 (ENSXETG00000001979) #32	harbi1 (ENSXETG00000001981) #33	atg13 (ENSXETG00000001983) #34	ENSXETG00000049017	arhgap1 (ENSXETG00000001985) #35	znf408 (ENSXETG00000034425) #36
Leishan spiny toad	MODERN SPECIES	1	ENSLLEG00000020854	FGF4 (ENSLLEG00000020868)	FGF19 (ENSLLEG00000020932)	ENSLLEG00000020984	CCND1 (ENSLLEG00000021050)	ENSLLEG00000021177	TPCN2 (ENSLLEG00000021215)	NADSYN1 (ENSLLEG00000021615)	ENSLLEG00000021771	ENSLLEG00000021985	ENSLLEG00000022055	ENSLLEG00000022188	CHST1 (ENSLLEG00000022223) #19	SLC35C1 (ENSLLEG00000022256) #20	CRY2 (ENSLLEG00000022391) #21	MAPK8IP1 (ENSLLEG00000022952) #22	PEX16 (ENSLLEG00000023185) #24	LARGE2 (ENSLLEG00000023346) #25	PHF21A (ENSLLEG00000023594) #26	CREB3L1 (ENSLLEG00000023855) #28	DGKZ (ENSLLEG00000024009) #29	CHRM4 (ENSLLEG00000025061) #31	ENSLLEG00000025086	AMBRA1 (ENSLLEG00000025123) #32	ENSLLEG00000025363	HARBI1 (ENSLLEG00000025377) #33	ATG13 (ENSLLEG00000025414) #34	ENSLLEG00000025519	ARHGAP1 (ENSLLEG00000008726) #35	ZNF408 (ENSLLEG00000008856) #36	ENSLLEG00000008894
Coelacanth	MODERN SPECIES	229	si:ch1073-281m9.1 (ENSLACG00000017284) #9	ENSLACG00000017384	ENSLACG00000017441	EXT2 (ENSLACG00000017456) #12	ALX4 (ENSLACG00000017583) #13	CD82 (ENSLACG00000017907) #14	TSPAN18 (ENSLACG00000018016) #15	TP53I11 (ENSLACG00000018072) #16	ENSLACG00000018164 #17	SYT13 (ENSLACG00000018202) #18	ENSLACG00000018240	ENSLACG00000018262	zgc:101566 (ENSLACG00000018301)	CHST1 (ENSLACG00000018365) #19	CRY2 (ENSLACG00000018488) #21	MAPK8IP1 (ENSLACG00000018506) #22	PEX16 (ENSLACG00000018529) #24	LARGE2 (ENSLACG00000018543) #25	CREB3L1 (ENSLACG00000018569) #28	PHF21A (ENSLACG00000018606) #26	DGKZ (ENSLACG00000018674) #29	MDK (ENSLACG00000018707) #30	CHRM4 (ENSLACG00000018713) #31	AMBRA1 (ENSLACG00000018746) #32	HARBI1 (ENSLACG00000018783) #33	ATG13 (ENSLACG00000018786) #34	ENSLACG00000018794	ARHGAP1 (ENSLACG00000018798) #35	f2 (ENSLACG00000018806)	znf408 (ENSLACG00000018810) #36	ENSLACG00000018813
Actinopterygii	ANCESTRAL SPECIES	12	ENSGT00940000158825	ENSGT00940000161128	ENSGT01090000260003.a.a	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000164361	ENSGT00730000111007.a.b	ENSGT00940000157530.b	ENSGT00390000013899.b	ENSGT00940000161262.a #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000012935	ENSGT00940000158287	ENSGT00390000014757	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00940000164122	ENSGT00940000153903.a.a	ENSGT00940000153201	ENSGT00940000163542
Reedfish	MODERN SPECIES	10	FADD (ENSECRG00000013771)	PPFIA1 (ENSECRG00000013899)	CTTN (ENSECRG00000014308)	shank2b (ENSECRG00000014415)	ENSECRG00000014528	ENSECRG00000014561	ENSECRG00000014642	ENSECRG00000000421	ENSECRG00000000434	chst1 (ENSECRG00000000443) #19	ENSECRG00000000453	ENSECRG00000000465	ENSECRG00000000474	slc35c1 (ENSECRG00000000481) #20	cry2 (ENSECRG00000000495) #21	MAPK8IP1 (ENSECRG00000000522) #22	ENSECRG00000000578	ENSECRG00000000596	cstpp1 (ENSECRG00000000608)	lrp4 (ENSECRG00000000743)	ckap5 (ENSECRG00000001122)	slc6a5 (ENSECRG00000001477)	prmt3 (ENSECRG00000001827)	htatip2 (ENSECRG00000001904)	dbx1a (ENSECRG00000001922)	NAV2 (ENSECRG00000002365)	e2f8 (ENSECRG00000003773)	csrp3 (ENSECRG00000003783)	zdhhc13 (ENSECRG00000003789)	ENSECRG00000003828	MPPED2 (ENSECRG00000004102)
Neopterygii	ANCESTRAL SPECIES	4	ENSGT00940000161128	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000164361	ENSGT00730000111007.a.b	ENSGT00940000157530.b.a	ENSGT01090000260003.a.a	ENSGT00940000157530.b.b	ENSGT00390000013899.b	ENSGT00940000161262.a #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00390000012935	ENSGT00940000158287	ENSGT00390000014757	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00940000164122	ENSGT00940000163542	ENSGT00390000005430	ENSGT00550000075025
Osteoglossocephalai	ANCESTRAL SPECIES	81	ENSGT00940000157182.g.a	ENSGT01090000260003.a.a	ENSGT00940000157182.g.b	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000164361	ENSGT00730000111007.a.b	ENSGT00940000165480	ENSGT00940000157530.b.b	ENSGT00390000013899.b	ENSGT00940000161262.a #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00940000158287	ENSGT00390000014757	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00940000164122.a.a	ENSGT00940000163542	ENSGT00390000005430	ENSGT00550000075025
Osteoglossiformes	ANCESTRAL SPECIES	68	ENSGT00940000158825.b	ENSGT00940000161128.c.b	ENSGT00940000161128.d	ENSGT00940000157182.g.a	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000164361	ENSGT00730000111007.a.b	ENSGT00940000165480	ENSGT00940000157530.b.b	ENSGT00390000013899.b	ENSGT00940000161262.a #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00940000158287	ENSGT00390000014757	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00940000164122.a.a	ENSGT00390000007681.b.a.a	ENSGT00390000005430	ENSGT00550000075025
P. kingsleyae	MODERN SPECIES	12	AMPD3 (ENSPKIG00000017137)	rnf141 (ENSPKIG00000017208)	fgf19 (ENSPKIG00000017230)	fgf4 (ENSPKIG00000017244)	fgf3 (ENSPKIG00000017262)	ANO1 (ENSPKIG00000017383)	ppfia1 (ENSPKIG00000017713)	CTTN (ENSPKIG00000018059)	shank2b (ENSPKIG00000018184)	acte1 (ENSPKIG00000018472)	ENSPKIG00000018495	zgc:101566 (ENSPKIG00000018546)	chst1 (ENSPKIG00000018563) #19	slc35c1 (ENSPKIG00000018572) #20	cry2 (ENSPKIG00000018597) #21	MAPK8IP1 (ENSPKIG00000018678) #22	lrp4 (ENSPKIG00000018840)	ckap5 (ENSPKIG00000019152)	NELL1 (ENSPKIG00000019550)
Asian bonytongue	MODERN SPECIES	2	fgf4 (ENSSFOG00015011876)	FGF3 (ENSSFOG00015005700)	ANO1 (ENSSFOG00015005616)	FADD (ENSSFOG00015032079)	ppfia1 (ENSSFOG00015005328)	CTTN (ENSSFOG00015005291)	shank2b (ENSSFOG00015005229)	acte1 (ENSSFOG00015000126)	ENSSFOG00015000093	guca1g (ENSSFOG00015023060)	ENSSFOG00015023039	zgc:101566 (ENSSFOG00015032927)	chst1 (ENSSFOG00015023025) #19	slc35c1 (ENSSFOG00015023014) #20	cry2 (ENSSFOG00015022994) #21	MAPK8IP1 (ENSSFOG00015022976) #22	lrp4 (ENSSFOG00015022948)	ckap5 (ENSSFOG00015022916)	NELL1 (ENSSFOG00015022874)	slc6a5 (ENSSFOG00015022864)	prmt3 (ENSSFOG00015022824)	htatip2 (ENSSFOG00015027816)	dbx1a (ENSSFOG00015022794)	NAV2 (ENSSFOG00015022588)	e2f8 (ENSSFOG00015022531)	csrp3 (ENSSFOG00015022509)	zdhhc13 (ENSSFOG00015022492)	ENSSFOG00015022457	mpped2a (ENSSFOG00015022438)	dnajc24 (ENSSFOG00015022427)	immp1l (ENSSFOG00015022420)
Clupeocephala	ANCESTRAL SPECIES	16	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000164361	ENSGT00730000111007.a.b	ENSGT00940000165480.a	ENSGT00940000165480.b	ENSGT00390000013260.A.a	ENSGT00940000157530.b.a	ENSGT00940000157530.b.b	ENSGT00390000013899.b	ENSGT00940000161262.a #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00940000157089.B #22	ENSGT00940000158287	ENSGT00390000014757	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00550000075025	ENSGT00390000001443	ENSGT00940000155391.a.b.b
Otomorpha	ANCESTRAL SPECIES	6	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000164361	ENSGT00730000111007.a.b	ENSGT00940000165480.a	ENSGT00940000165480.b	ENSGT00390000013260.A.a	ENSGT00940000157530.b.a	ENSGT00940000157530.b.b	ENSGT00390000013315 #20	ENSGT00390000013899.b	ENSGT00940000161262.a #19	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00940000157089.B #22	ENSGT00940000158287	ENSGT00390000014757	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00550000075025	ENSGT00390000001443	ENSGT00940000155391.a.b.b
Otophysi	ANCESTRAL SPECIES	72																ENSGT00940000157089.B #22	ENSGT00940000158287	ENSGT00390000014757	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000155663.f.a	ENSGT00950000183093.B.b	ENSGT00550000075025
Characiphysae	ANCESTRAL SPECIES	131	ENSGT00940000160694.g.b	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a.e	ENSGT00940000158136	ENSGT00390000005535	ENSGT00940000164949	ENSGT00950000182838.A.a.b	ENSGT00940000156076.a.a.a.a.c	ENSGT00940000163235.A.a.b	ENSGT01040000240607	ENSGT00940000156076.a.a.a.a.d.b	ENSGT00940000163235.A.a.a.b	ENSGT00390000013104	ENSGT00390000013315 #20	ENSGT00940000157089.B #22	ENSGT00940000158287	ENSGT00390000014757	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00550000075025	ENSGT00390000001443	ENSGT00940000155391.a.b.b
Characiphysae_b	ANCESTRAL SPECIES	4	ENSGT00940000160694.g.b	ENSGT00940000161773	ENSGT00950000183108.b.a.a.i.a	ENSGT00950000183082.a.e	ENSGT00940000158136	ENSGT00390000005535	ENSGT00940000164949	ENSGT00950000182838.A.a.b	ENSGT00940000156076.a.a.a.a.c	ENSGT00940000163235.A.a.b	ENSGT01040000240607	ENSGT00940000156076.a.a.a.a.d.b	ENSGT00940000163235.A.a.a.b	ENSGT00390000013104	ENSGT00390000013315 #20	ENSGT00940000157089.B #22	ENSGT00940000158287
Characoidei	ANCESTRAL SPECIES	331									ENSGT00940000156076.a.a.a.a.c	ENSGT00940000163235.A.a.b	ENSGT01040000240607	ENSGT00940000156076.a.a.a.a.d.b	ENSGT00940000163235.A.a.a.b	ENSGT00390000013104	ENSGT00390000013315 #20	ENSGT00940000157089.B #22	ENSGT00940000158287
Red-bellied piranha	MODERN SPECIES	451										ENSPNAG00000026579	ENSPNAG00000026602	ENSPNAG00000026867	ENSPNAG00000007154	tollip (ENSPNAG00000005677)	slc35c1 (ENSPNAG00000026948) #20	MAPK8IP1 (ENSPNAG00000005764) #22	lrp4 (ENSPNAG00000004179)	ENSPNAG00000027415
Mexicana tetra	MODERN SPECIES	20	polr2l (ENSAMXG00000037735)	CPSF7 (ENSAMXG00000003296)	sdhaf2 (ENSAMXG00000042602)	syt7b (ENSAMXG00000003329)	ENSAMXG00000042767	ENSAMXG00000033663	rplp2l (ENSAMXG00000033872)	ENSAMXG00000039930	ENSAMXG00000040339	ENSAMXG00000041219	ENSAMXG00000034021	ENSAMXG00000037407	ENSAMXG00000038098	tollip (ENSAMXG00000031530)	slc35c1 (ENSAMXG00000035377) #20	MAPK8IP1 (ENSAMXG00000018486) #22	ENSAMXG00000029139	nxph2b (ENSAMXG00000039710)	spoplb (ENSAMXG00000031842)	ENSAMXG00000029854	ENSAMXG00000043558	ENSAMXG00000014144	MINAR1 (ENSAMXG00000014109)	mthfs (ENSAMXG00000039756)	zfand6 (ENSAMXG00000037308)	fah (ENSAMXG00000020041)	ENSAMXG00000034421	arnt2 (ENSAMXG00000019978)	ABHD17C (ENSAMXG00000036243)	CEMIP (ENSAMXG00000019906)	mesd (ENSAMXG00000019872)
Electric eel	MODERN SPECIES	475	calb2b (ENSEEEG00000003881)	ENSEEEG00000003887	slc38a7 (ENSEEEG00000003891)	mrpl21 (ENSEEEG00000003906)	ENSEEEG00000003908	AP2A2 (ENSEEEG00000003911)	ENSEEEG00000003924	ENSEEEG00000003926	ENSEEEG00000003927	ENSEEEG00000003928	ENSEEEG00000003929	ENSEEEG00000003930	ENSEEEG00000003931	tollip (ENSEEEG00000003932)	slc35c1 (ENSEEEG00000003933) #20	MAPK8IP1 (ENSEEEG00000003934) #22	ENSEEEG00000003942
Channel catfish	MODERN SPECIES	1	ENSIPUG00000017616	helz2c (ENSIPUG00000017627)	cmtr2 (ENSIPUG00000017648)	calb2 (ENSIPUG00000017673)	slc38a7 (ENSIPUG00000017796)	MRPL21 (ENSIPUG00000017862)	ENSIPUG00000017892	ap2a2 (ENSIPUG00000017908)	ENSIPUG00000018000	ENSIPUG00000018032	ENSIPUG00000018228	ENSIPUG00000018239	ENSIPUG00000018257	tollip (ENSIPUG00000018263)	slc35c1 (ENSIPUG00000018276) #20	MAPK8IP1 (ENSIPUG00000018285) #22	lrp4 (ENSIPUG00000018338)	ckap5 (ENSIPUG00000018496)	nell1 (ENSIPUG00000018603)	slc6a5 (ENSIPUG00000018671)	prmt3 (ENSIPUG00000018719)	htatip2 (ENSIPUG00000018753)	dbx1a (ENSIPUG00000018790)	NAV2 (ENSIPUG00000018827)	e2f8 (ENSIPUG00000018886)	immp1l (ENSIPUG00000018906)	elp4 (ENSIPUG00000018991)	anx2a (ENSIPUG00000019052)	gtf2a2 (ENSIPUG00000019123)	ENSIPUG00000019131	ENSIPUG00000019137
Cyprinoidei	ANCESTRAL SPECIES	41	ENSGT01030000234592.A.a.a.a.a	ENSGT00940000160527.b	ENSGT01040000240385.A.a.b.b	ENSGT00940000167415	ENSGT01030000234754	ENSGT00940000156397.a.b	ENSGT00940000166741	ENSGT00940000163520.A.a.a.b.q	ENSGT01030000234532.B.e.a.a.a.b	ENSGT00390000015386.b	ENSGT00940000159778.a	ENSGT00940000154658.a	ENSGT00940000155527.j.a	ENSGT00940000155586.B	ENSGT00950000182898.a.a.a.a.a.g	ENSGT00940000157089.B #22	ENSGT00390000005535	ENSGT00910000144226	ENSGT00940000165179.b	ENSGT00940000157468.a.a.a	ENSGT00940000156076.a.a.a.a.c	ENSGT00940000156076.b	ENSGT00940000156076.a.a.a.a.d.b	ENSGT00940000177923	ENSGT00940000163235.A.a.b	ENSGT00940000162219.x	ENSGT00390000013104	ENSGT00390000013315 #20	ENSGT00940000160483.k.b	ENSGT00940000160644	ENSGT00390000004147
Cyprininae	ANCESTRAL SPECIES	290	ENSGT00940000160527.b.a	ENSGT01040000240385.A.a.b.b	ENSGT00940000167415	ENSGT01030000234754.a.b	ENSGT00940000156397.a.b.c	ENSGT00940000166741.d	ENSGT01030000234532.B.e.a.a.a.b.a.a	ENSGT00390000015386.b.c.a	ENSGT00940000159778.a.b	ENSGT00940000154658.a	ENSGT00940000155527.j.a	ENSGT00940000155586.B.e.a	ENSGT00940000156348.B.n	ENSGT00940000155586.B.f	ENSGT00950000182898.a.a.a.a.a.g.e	ENSGT00940000157089.B #22	ENSGT00390000005535	ENSGT00910000144226	ENSGT00940000165179.b.a.b	ENSGT00940000157468.a.a.a.e	ENSGT00940000156076.a.a.a.a.c	ENSGT00940000156076.b	ENSGT00940000156076.a.a.a.a.d.b	ENSGT00940000177923	ENSGT01040000240558.a	ENSGT00940000164871.b.e.b.a	ENSGT00940000163235.E	ENSGT00940000162219.x	ENSGT00390000013104	ENSGT00390000013315.a.a #20	ENSGT00940000160483.k.b.d
Goldfish	MODERN SPECIES	25	ENSCARG00000005944	znf219 (ENSCARG00000005924)	ENSCARG00000005877	ENSCARG00000005848	ENSCARG00000005842	ENSCARG00000005833	ENSCARG00000005828	ENSCARG00000036359	ENSCARG00000036325	DOK7 (ENSCARG00000036310)	ENSCARG00000036201	ENSCARG00000036171	ADGRL3 (ENSCARG00000034602)	MPDZ (ENSCARG00000029634)	ENSCARG00000029360	MAPK8IP1 (ENSCARG00000029315) #22	HECTD4 (ENSCARG00000028420)	ENSCARG00000028369	RPH3A (ENSCARG00000028220)	ENSCARG00000028141	tollip (ENSCARG00000028096)	slc35c1 (ENSCARG00000028088) #20	RASGRP2 (ENSCARG00000027971)	SIPA1 (ENSCARG00000027900)	ENSCARG00000027850	ywhae2 (ENSCARG00000027749)	psmd9 (ENSCARG00000027725)	lrp4 (ENSCARG00000026352)	cacnb2a (ENSCARG00000022899)	ENSCARG00000022801	SMCHD1 (ENSCARG00000022493)
Cyprininae_a	ANCESTRAL SPECIES	141	ENSGT01030000234754.b	ENSGT00940000156397.a.b.d	ENSGT00940000166741.c	ENSGT00940000156397.a.b.c	ENSGT00940000166741.d	ENSGT01030000234532.B.e.a.a.a.b.a.a	ENSGT00390000015386.b.c.a	ENSGT00940000159778.a.b	ENSGT00940000154658.a	ENSGT00940000155527.j.a	ENSGT00940000155586.B.e.a	ENSGT00940000156348.B.n	ENSGT00940000155586.B.f	ENSGT00950000182898.a.a.a.a.a.g.f	ENSGT00950000182898.a.a.a.a.a.g.e	ENSGT00940000157089.B #22	ENSGT00390000005535	ENSGT00910000144226	ENSGT00940000165179.b.a.a	ENSGT00940000157468.a.a.a.f	ENSGT00390000013104.d.b	ENSGT00390000013315.a.a #20	ENSGT00940000160483.k.b.d	ENSGT00940000160644.d	ENSGT01030000234532.A.a.a.a.a.a.a.b	ENSGT01090000260061.c.b.ud.c.b	ENSGT00390000004147.g	ENSGT00940000158287.b	ENSGT00950000182837.a.b.a.o.a	ENSGT00940000155370	ENSGT00940000155458.f
Common carp reference	DUPLICATION
Common carp reference	MODERN SPECIES	6	ENSCCRG00000061270	ENSCCRG00000070796	ENSCCRG00000065302	ENSCCRG00000078771	ENSCCRG00000053835	ENSCCRG00000070480	ENSCCRG00000070638	ENSCCRG00000054764	ENSCCRG00000077346	ENSCCRG00000043081	ENSCCRG00000043098	ENSCCRG00000045044	ENSCCRG00000071847	ENSCCRG00000066362	ENSCCRG00000080579	ENSCCRG00000080446 #22	ENSCCRG00000001161	ENSCCRG00000061890	ENSCCRG00000041593	ENSCCRG00000077788	tollip (ENSCCRG00000066323)	slc35c1 (ENSCCRG00000066984) #20	ENSCCRG00000069042	ENSCCRG00000057719	ENSCCRG00000061648	ywhae2 (ENSCCRG00000065575)	psmd9 (ENSCCRG00000081299)	lrp4 (ENSCCRG00000015632)	cacnb2a (ENSCCRG00000011606)	myl12.1 (ENSCCRG00000067896)	MYOM1 (ENSCCRG00000044950)
Common carp reference	MODERN SPECIES		ENSCCRG00000006041	ENSCCRG00000067756	ENSCCRG00000000161	ENSCCRG00000058836	ENSCCRG00000080695	ENSCCRG00000052846	ENSCCRG00000026577	ENSCCRG00000027851	ENSCCRG00000060855	ENSCCRG00000082189	ENSCCRG00000056466	ENSCCRG00000075826	ENSCCRG00000080023	ENSCCRG00000081606	ENSCCRG00000063445	ENSCCRG00000061685 #22	mrpl21 (ENSCCRG00000000488)	ENSCCRG00000073285	ENSCCRG00000074248	ENSCCRG00000082617	ENSCCRG00000071859	ENSCCRG00000056257	tollip (ENSCCRG00000020513)	slc35c1 (ENSCCRG00000067739) #20	ENSCCRG00000075515	ENSCCRG00000040406	ENSCCRG00000003971	ywhae2 (ENSCCRG00000061887)	psmd9 (ENSCCRG00000003936)	lrp4 (ENSCCRG00000016152)	cacnb2a (ENSCCRG00000054723)
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	389													ENSSGRG00000032468	ENSSGRG00000032477	ENSSGRG00000032489	MAPK8IP1 (ENSSGRG00000032571) #22	ENSSGRG00000032592	ENSSGRG00000032596	ENSSGRG00000032598	ENSSGRG00000032601	ENSSGRG00000032604	ENSSGRG00000032607	ENSSGRG00000032611	tollip (ENSSGRG00000032618)	TOLLIP (ENSSGRG00000032653)	ENSSGRG00000032654	slc35c1 (ENSSGRG00000032655) #20	RASGRP2 (ENSSGRG00000032656)	ENSSGRG00000032658	ENSSGRG00000032659	ywhae2 (ENSSGRG00000032713)
Golden-line barbel	MODERN SPECIES	1047												ENSSGRG00000055305	ENSSGRG00000055306	ENSSGRG00000055308	ENSSGRG00000055309	MAPK8IP1 (ENSSGRG00000055310) #22	mrpl21 (ENSSGRG00000055311)	ENSSGRG00000055312
Zebrafish	MODERN SPECIES	22	ENSDARG00000068065	ENSDARG00000051804	ENSDARG00000090371	btr12 (ENSDARG00000051809)	ENSDARG00000101446	znf219 (ENSDARG00000079738)	ENSDARG00000078979	cbln8 (ENSDARG00000019294)	cbln6 (ENSDARG00000035718)	ENSDARG00000088625	SLC24A2 (ENSDARG00000063158)	ENSDARG00000105782	ENSDARG00000105714	ADGRL3 (ENSDARG00000090624)	ENSDARG00000099078	MAPK8IP1 (ENSDARG00000090326) #22	mrpl21 (ENSDARG00000003846)	HECTD4 (ENSDARG00000101079)	ENSDARG00000098989	ENSDARG00000105490	ENSDARG00000109688	ENSDARG00000104914	ENSDARG00000099470	tollip (ENSDARG00000098486)	slc35c1 (ENSDARG00000104669) #20	ENSDARG00000102247	RASGRP2 (ENSDARG00000099092)	SIPA1 (ENSDARG00000076697)	ENSDARG00000041086	ywhae2 (ENSDARG00000017014)	psmd9 (ENSDARG00000006300)
Clupeiformes	ANCESTRAL SPECIES	160	ENSGT00940000163723.A.e	ENSGT00940000163723.A.f.b	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000164361.a	ENSGT00730000111007.a.b	ENSGT00940000165480.a	ENSGT00940000165480.b	ENSGT00390000013260.A.a	ENSGT00940000157530.b.a	ENSGT00940000157530.b.b	ENSGT00940000161262.a #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.B #22	ENSGT00940000158287	ENSGT00390000014757	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825
Atlantic herring	MODERN SPECIES	22	ppfia1 (ENSCHAG00000013547)	ENSCHAG00000013262	CTTN (ENSCHAG00000011070)	ENSCHAG00000010585	ENSCHAG00000010556	ENSCHAG00000010370	ENSCHAG00000010352	ENSCHAG00000010344	ENSCHAG00000010328	ENSCHAG00000010323	ENSCHAG00000010161	CHST1 (ENSCHAG00000010152) #19	slc35c1 (ENSCHAG00000010142) #20	ENSCHAG00000010117	CRY2 (ENSCHAG00000009492) #21	MAPK8IP1 (ENSCHAG00000009457) #22	ENSCHAG00000009275	lrp4 (ENSCHAG00000006035)	NELL1 (ENSCHAG00000001429)	slc6a5 (ENSCHAG00000000393)	prmt3 (ENSCHAG00000000254)	ENSCHAG00000000213	ENSCHAG00000026438	DOK4 (ENSCHAG00000026432)	ccdc102a (ENSCHAG00000026421)	adgrg1 (ENSCHAG00000026407)	ENSCHAG00000026396	slc7a6 (ENSCHAG00000026332)	slc7a6os (ENSCHAG00000026322)	scube2 (ENSCHAG00000025898)	tmem9b (ENSCHAG00000025845)
Denticle herring	MODERN SPECIES	7	ENSDCDG00000035386	arfgap2 (ENSDCDG00000035382)	ENSDCDG00000035380	pex16 (ENSDCDG00000035379) #24	ENSDCDG00000035378	large2 (ENSDCDG00000035347) #25	ENSDCDG00000035236	KIFC3 (ENSDCDG00000035185)	ENSDCDG00000035177	guca1g (ENSDCDG00000035172)	ENSDCDG00000035170	ENSDCDG00000035168	chst1 (ENSDCDG00000035167) #19	slc35c1 (ENSDCDG00000035166) #20	CRY2 (ENSDCDG00000035147) #21	MAPK8IP1 (ENSDCDG00000035135) #22	lrp4 (ENSDCDG00000034874)	ENSDCDG00000034835	NELL1 (ENSDCDG00000034058)	slc6a5 (ENSDCDG00000033969)	prmt3 (ENSDCDG00000033958)	AP2A2 (ENSDCDG00000033915)	cd151l (ENSDCDG00000033905)	taldo1 (ENSDCDG00000033894)	tspan4a (ENSDCDG00000033890)	ddb1 (ENSDCDG00000033883)	luzp2 (ENSDCDG00000033877)	TMEM138 (ENSDCDG00000033874)	DAGLA (ENSDCDG00000033867)	ENSDCDG00000033856	CPSF7 (ENSDCDG00000033850)
Euteleosteomorpha	ANCESTRAL SPECIES	211				ENSGT00940000154996.a.b.b	ENSGT00940000164990.d	ENSGT00940000161001	ENSGT00940000162677	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##37	ENSGT00940000157089.B #22	ENSGT00940000158287	ENSGT00390000014757	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000180696	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a
Acanthomorphata	ANCESTRAL SPECIES	28	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b	ENSGT00940000165530.b	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201	ENSGT00940000153903.a.b.a	ENSGT00940000155653.b	ENSGT00390000001545	ENSGT01040000244721	ENSGT00950000182839.B.b.b	ENSGT00950000183205.b.a.a	ENSGT00940000160931	ENSGT00940000165300	ENSGT00940000160574	ENSGT00940000157089.B #22	ENSGT00940000158287	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000180696	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f
Euacanthomorphacea	ANCESTRAL SPECIES	44																ENSGT00940000157089.B #22	ENSGT00940000158287	ENSGT00940000154963	ENSGT00940000180696	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d	ENSGT00940000156926.d	ENSGT00940000160333
Percomorphaceae	ANCESTRAL SPECIES	15	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##37	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000157530.b.a	ENSGT00940000157089.B #22	ENSGT00940000158287	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000180696	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d	ENSGT00940000156926.d
Tiger tail seahorse	MODERN SPECIES	256	ITFG1 (ENSHCOG00000005891)	NETO2 (ENSHCOG00000005833)	DNAJA2 (ENSHCOG00000005804)	lrp3 (ENSHCOG00000005789)	slc7a10a (ENSHCOG00000005750)	rhpn2 (ENSHCOG00000005720)	cep89 (ENSHCOG00000005696)	zgc:165481 (ENSHCOG00000005669)	ABCC12 (ENSHCOG00000005660)	ENSHCOG00000005605	ENSHCOG00000005584	ENSHCOG00000005540	ENSHCOG00000005529	SLCO3A1 (ENSHCOG00000005517)	ENSHCOG00000000704	MAPK8IP1 (ENSHCOG00000005476) #22	lrp4 (ENSHCOG00000005440)	NELL1 (ENSHCOG00000005389)	slc6a5 (ENSHCOG00000005358)	prmt3 (ENSHCOG00000005337)	htatip2 (ENSHCOG00000005326)	dbx1a (ENSHCOG00000005312)	NAV2 (ENSHCOG00000005236)	slc10a2 (ENSHCOG00000005174)	e2f8 (ENSHCOG00000005132)	csrp3 (ENSHCOG00000005117)	zdhhc13 (ENSHCOG00000005101)	mpped2a (ENSHCOG00000005088)	ENSHCOG00000005065	ENSHCOG00000000830	NR2E3 (ENSHCOG00000000127)
Percomorphaceae_B	ANCESTRAL SPECIES	12	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00530000068132	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##37	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000157530.b.a	ENSGT00960000187709	ENSGT00940000163916	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000180696	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000181004	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a
Ovalentaria	ANCESTRAL SPECIES	17	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00530000068132	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##37	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000157530.b.a	ENSGT00940000163916	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00940000154963	ENSGT00940000180696	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000181004	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f
Ovalentaria_B	ANCESTRAL SPECIES	10	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##37	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000157530.b.a	ENSGT00940000163916	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000180696	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000181004	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a
Cichlidae	ANCESTRAL SPECIES	11	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##37	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000163916	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d
Pseudocrenilabrinae	ANCESTRAL SPECIES	13	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##37	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000163916	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f.n	ENSGT00950000182858.C.f.m.b	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	13	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##37	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000163916	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f.m.a	ENSGT00950000182858.C.f.m.b	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT01100000267088	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a
Haplochromini	ANCESTRAL SPECIES	11	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##37	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000163916	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f.n	ENSGT00950000182858.C.f.m.b	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT01100000267088	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a
Burton s mouthbrooder	MODERN SPECIES	1221														ENSHBUG00000001189	ENSHBUG00000011266	MAPK8IP1 (ENSHBUG00000011291) #22	ENSHBUG00000011305
Haplochromini_A	ANCESTRAL SPECIES	10	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##37	ENSGT00390000013315 #20	ENSGT00940000179349	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000163916	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f.n	ENSGT00950000182858.C.f.m.b	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT01100000267088	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a
Haplochromini_B	ANCESTRAL SPECIES	3	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##37	ENSGT00390000013315 #20	ENSGT00940000179349	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000163916	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f.n	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d	ENSGT00940000156926.d
Eastern happy	MODERN SPECIES		ENSACLG00000011193	hsd17b12b (ENSACLG00000011156) #7	ENSACLG00000011151	LRRC4C (ENSACLG00000011030)	apip (ENSACLG00000011019)	slc1a2a (ENSACLG00000010975)	PAMR1 (ENSACLG00000010941) ##37	slc35c1 (ENSACLG00000010925) #20	ENSACLG00000010898	ENSACLG00000010871	chst1 (ENSACLG00000010864) #19	ENSACLG00000010847	ENSACLG00000010839	ENSACLG00000010836	ENSACLG00000010824	MAPK8IP1 (ENSACLG00000010772) #22	ENSACLG00000010664	vstm2b (ENSACLG00000010655)	ENSACLG00000010647	vps35 (ENSACLG00000010584)	zgc:92818 (ENSACLG00000010563)	ANO9 (ENSACLG00000010520)	ENSACLG00000010506	shcbp1 (ENSACLG00000010482)	ENSACLG00000010474	spg21 (ENSACLG00000010436)	pdcd7 (ENSACLG00000010263)	KBTBD13 (ENSACLG00000010261)	UBAP1L (ENSACLG00000010255)	ENSACLG00000010254	rasl12 (ENSACLG00000010244)
Zebra mbuna	MODERN SPECIES	1091	trpm5 (ENSMZEG00005014025)	traf6 (ENSMZEG00005014045)	ttc17 (ENSMZEG00005014070)	hsd17b12b (ENSMZEG00005014110) #7	ENSMZEG00005014126	LRRC4C (ENSMZEG00005014136)	apip (ENSMZEG00005014143)	slc1a2a (ENSMZEG00005014155)	PAMR1 (ENSMZEG00005014173) ##37	slc35c1 (ENSMZEG00005014185) #20	ENSMZEG00005014191	chst1 (ENSMZEG00005014195) #19	ENSMZEG00005014203	ENSMZEG00005014211	ENSMZEG00005014220	MAPK8IP1 (ENSMZEG00005014229) #22	ENSMZEG00005014251	ENSMZEG00005014257	ENSMZEG00005014270	lrp4 (ENSMZEG00005014311)	NELL1 (ENSMZEG00005014408)	ENSMZEG00005014419	slc6a5 (ENSMZEG00005014432)	prmt3 (ENSMZEG00005014447)	htatip2 (ENSMZEG00005014464)	dbx1a (ENSMZEG00005014483)	NAV2 (ENSMZEG00005014529)	e2f8 (ENSMZEG00005014622)	csrp3 (ENSMZEG00005014652)	zdhhc13 (ENSMZEG00005014665)	mpped2a (ENSMZEG00005014683)
P. nyererei	MODERN SPECIES	654												ENSPNYG00000024263	chst1 (ENSPNYG00000024262) #19	ENSPNYG00000024261	ENSPNYG00000024260	MAPK8IP1 (ENSPNYG00000024259) #22
Lyretail cichlid	MODERN SPECIES	320	ENSNBRG00000019035	trpm5 (ENSNBRG00000018973)	traf6 (ENSNBRG00000018939)	ttc17 (ENSNBRG00000018886)	hsd17b12b (ENSNBRG00000018801) #7	ENSNBRG00000018783	LRRC4C (ENSNBRG00000018764)	apip (ENSNBRG00000018631)	slc1a2a (ENSNBRG00000018584)	PAMR1 (ENSNBRG00000018544) ##37	slc35c1 (ENSNBRG00000018530) #20	ENSNBRG00000018522	chst1 (ENSNBRG00000018513) #19	ENSNBRG00000018473	ENSNBRG00000018456	MAPK8IP1 (ENSNBRG00000018420) #22	ENSNBRG00000018403	lrp4 (ENSNBRG00000018321)	ENSNBRG00000018265	NELL1 (ENSNBRG00000018215)	slc6a5 (ENSNBRG00000018128)	prmt3 (ENSNBRG00000018024)	htatip2 (ENSNBRG00000017997)	dbx1a (ENSNBRG00000017981)	NAV2 (ENSNBRG00000017891)	e2f8 (ENSNBRG00000017843)	ENSNBRG00000017816	csrp3 (ENSNBRG00000017790)	zdhhc13 (ENSNBRG00000017600)	mpped2a (ENSNBRG00000017550)	ENSNBRG00000017535
Nile tilapia	MODERN SPECIES		lingo1b (ENSONIG00000005857)	kcnq1.1 (ENSONIG00000005859)	ENSONIG00000034462	trpm5 (ENSONIG00000005867)	traf6 (ENSONIG00000040460)	ttc17 (ENSONIG00000005886)	ENSONIG00000036270	LRRC4C (ENSONIG00000020451)	apip (ENSONIG00000005908)	hsd17b12b (ENSONIG00000042636) #7	slc1a2a (ENSONIG00000005912)	ENSONIG00000005915 ##37	chst1 (ENSONIG00000020452) #19	ENSONIG00000005920	ENSONIG00000034018	MAPK8IP1 (ENSONIG00000036840) #22	ENSONIG00000042626	A3GALT2 (ENSONIG00000027795)	ENSONIG00000041355	celf1 (ENSONIG00000008300)	OTOG (ENSONIG00000007889)	myod2 (ENSONIG00000007897)	TNNT3 (ENSONIG00000007898)	ENSONIG00000032798	ENSONIG00000030513	ENSONIG00000041528	ENSONIG00000029025	ENSONIG00000040953	ENSONIG00000038942	fgf4 (ENSONIG00000018093)	fgf3 (ENSONIG00000018091)
Midas cichlid	MODERN SPECIES	1094	ENSACIG00000021007	trpm5 (ENSACIG00000021027)	traf6 (ENSACIG00000021157)	ttc17 (ENSACIG00000021176)	hsd17b12b (ENSACIG00000021230) #7	ENSACIG00000021246	ENSACIG00000021259	LRRC4C (ENSACIG00000021271)	apip (ENSACIG00000021283)	slc1a2a (ENSACIG00000021292)	PAMR1 (ENSACIG00000021308) ##37	slc35c1 (ENSACIG00000021337) #20	chst1 (ENSACIG00000021348) #19	ENSACIG00000021353	ENSACIG00000021451	MAPK8IP1 (ENSACIG00000021491) #22	ENSACIG00000021523	ENSACIG00000021540
Pomacentridae	ANCESTRAL SPECIES	15	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##37	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b.b	ENSGT00940000157530.b.a	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000180696	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000181004	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a.p
Pomacentridae_A	ANCESTRAL SPECIES	66	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##37	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b.b	ENSGT00940000157530.b.a	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00940000154963	ENSGT00940000180696	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000181004	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a.p	ENSGT00390000007681.b.a.a.o
Amphiprion	ANCESTRAL SPECIES	42	ENSGT00390000013180	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##37	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b.b	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000177592.b.a.a	ENSGT00940000163467.a.b.b.a.b	ENSGT00940000154963	ENSGT00940000180696	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000181004	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00940000177702.a.a
Clown anemonefish	MODERN SPECIES	1453														chst1 (ENSAOCG00000003077) #19	ENSAOCG00000003074	MAPK8IP1 (ENSAOCG00000003073) #22	A3GALT2 (ENSAOCG00000003069)	lrp4 (ENSAOCG00000000070)	ENSAOCG00000003022
Orange clownfish	MODERN SPECIES		trpm5 (ENSAPEG00000000110)	ENSAPEG00000000111	traf6 (ENSAPEG00000000112)	ttc17 (ENSAPEG00000000113)	hsd17b12b (ENSAPEG00000000115) #7	ENSAPEG00000000116	LRRC4C (ENSAPEG00000000117)	apip (ENSAPEG00000000118)	slc1a2a (ENSAPEG00000000119)	ENSAPEG00000000120 ##37	slc35c1 (ENSAPEG00000000121) #20	chst1 (ENSAPEG00000000122) #19	ENSAPEG00000000123	ENSAPEG00000000124	ENSAPEG00000000125	MAPK8IP1 (ENSAPEG00000000126) #22	A3GALT2 (ENSAPEG00000000127)	lrp4 (ENSAPEG00000000128)	ENSAPEG00000000131	NELL1 (ENSAPEG00000000132)	ENSAPEG00000000133	ENSAPEG00000000134	ENSAPEG00000000135	ENSAPEG00000000136	ENSAPEG00000000137	slc6a5 (ENSAPEG00000000138)	prmt3 (ENSAPEG00000000139)	htatip2 (ENSAPEG00000000140)	dbx1a (ENSAPEG00000000141)	NAV2 (ENSAPEG00000000142)	ENSAPEG00000000143
Spiny chromis	MODERN SPECIES	1702														ENSAPOG00000023463	ENSAPOG00000023429	MAPK8IP1 (ENSAPOG00000023261) #22	A3GALT2 (ENSAPOG00000023221)
Bicolor damselfish	MODERN SPECIES	1640														ENSSPAG00000020064	ENSSPAG00000019762	MAPK8IP1 (ENSSPAG00000019652) #22
Atherinomorphae	ANCESTRAL SPECIES	8	ENSGT00940000154996.a.b.b	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00530000068132	ENSGT00940000155379.g.a	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d	ENSGT00940000156926.d
Oryzias	ANCESTRAL SPECIES	13	ENSGT00860000135092	ENSGT00390000013180	ENSGT00940000154996.a.b.b	ENSGT00940000164990.d	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a.d	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000153246.a.a.a.d
Oryzias_b	ANCESTRAL SPECIES	5	ENSGT00860000135092	ENSGT00390000013180	ENSGT00940000154996.a.b.b	ENSGT00940000164990.d	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a.d	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f.g	ENSGT00950000182858.C.f.h	ENSGT00940000158287	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a
Javanese ricefish	MODERN SPECIES	17	trpm5 (ENSOJAG00000000332)	traf6 (ENSOJAG00000000283)	ttc17 (ENSOJAG00000000240)	ENSOJAG00000000172	hsd17b12b (ENSOJAG00000000159) #7	ENSOJAG00000000128	LRRC4C (ENSOJAG00000000089)	ENSOJAG00000000068	apip (ENSOJAG00000016902)	ENSOJAG00000015820	slc35c1 (ENSOJAG00000015726) #20	ENSOJAG00000015714	ENSOJAG00000015688	chst1 (ENSOJAG00000015677) #19	ENSOJAG00000015665	MAPK8IP1 (ENSOJAG00000015651) #22	ENSOJAG00000015638	ENSOJAG00000015513	ENSOJAG00000015497	ENSOJAG00000015490	lrp4 (ENSOJAG00000014843)	ENSOJAG00000014828	NELL1 (ENSOJAG00000012002)	slc6a5 (ENSOJAG00000011557)	prmt3 (ENSOJAG00000011109)	htatip2 (ENSOJAG00000011049)	dbx1a (ENSOJAG00000011041)	ENSOJAG00000009101	csrp3 (ENSOJAG00000009082)	zdhhc13 (ENSOJAG00000008970)	mpped2a (ENSOJAG00000008895)
Indian medaka	MODERN SPECIES	26	ttc17 (ENSOMEG00000004476)	hsd17b12b (ENSOMEG00000004391) #7	ENSOMEG00000000101	LRRC4C (ENSOMEG00000004334)	apip (ENSOMEG00000004323)	slc1a2a (ENSOMEG00000004288)	slc35c1 (ENSOMEG00000004263) #20	chst1 (ENSOMEG00000004247) #19	CACNG4 (ENSOMEG00000004240)	FNDC5 (ENSOMEG00000004225)	olig4 (ENSOMEG00000004214)	bsdc1 (ENSOMEG00000004206)	marcksl1a (ENSOMEG00000004195)	gjb9a (ENSOMEG00000004186)	ENSOMEG00000004172	MAPK8IP1 (ENSOMEG00000004148) #22	ENSOMEG00000004105	ENSOMEG00000004083	lrp4 (ENSOMEG00000003967)	NELL1 (ENSOMEG00000003767)	slc6a5 (ENSOMEG00000003689)	prmt3 (ENSOMEG00000003641)	htatip2 (ENSOMEG00000003594)	ENSOMEG00000003567	dbx1a (ENSOMEG00000003559)	NAV2 (ENSOMEG00000003514)	e2f8 (ENSOMEG00000003361)	ENSOMEG00000003350	rpl12 (ENSOMEG00000003330)	pole3 (ENSOMEG00000003317)	cd82a (ENSOMEG00000003303) #14
Oryzias_a	ANCESTRAL SPECIES	6	ENSGT00860000135092	ENSGT00390000013180	ENSGT00940000154996.a.b.b	ENSGT00940000164990.d	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a.c	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f.i.b	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000153246.a.a.a.d
Japanese Medaka HdrR	MODERN SPECIES	17	hsd17b12b (ENSORLG00000001004) #7	ENSORLG00000026513	ENSORLG00000029427	LRRC4C (ENSORLG00000000988)	ENSORLG00000030542	apip (ENSORLG00000000982)	ENSORLG00000030529	slc1a2a (ENSORLG00000000964)	slc35c1 (ENSORLG00000024413) #20	chst1 (ENSORLG00000000946) #19	ENSORLG00000000925	ENSORLG00000000893	ENSORLG00000029669	ENSORLG00000023015	ENSORLG00000028272	MAPK8IP1 (ENSORLG00000000916) #22	ENSORLG00000026038	ENSORLG00000023544	ENSORLG00000022596	ENSORLG00000025652	NELL1 (ENSORLG00000022140)	slc6a5 (ENSORLG00000000875)	ENSORLG00000030475	prmt3 (ENSORLG00000000829)	htatip2 (ENSORLG00000027238)	dbx1a (ENSORLG00000024440)	NAV2 (ENSORLG00000000800)	ENSORLG00000028070	e2f8 (ENSORLG00000000786)	csrp3 (ENSORLG00000000776)	ENSORLG00000023620
Chinese medaka	MODERN SPECIES	715															ENSOSIG00000014640	MAPK8IP1 (ENSOSIG00000014641) #22	ENSOSIG00000014645	ENSOSIG00000014653
Cyprinodontiformes	ANCESTRAL SPECIES	9	ENSGT00940000154996.a.b.b	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00530000068132	ENSGT00940000155379.g.a	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d	ENSGT00940000156926.d
Aplocheiloidei	ANCESTRAL SPECIES	39	ENSGT00390000013180	ENSGT00940000154996.a.b.b	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d	ENSGT00940000156926.d
Mangrove rivulus	MODERN SPECIES	28	ENSKMAG00000002993	ENSKMAG00000003018	kcnq1.1 (ENSKMAG00000003034)	ENSKMAG00000003094	trpm5 (ENSKMAG00000003109)	traf6 (ENSKMAG00000003166)	ttc17 (ENSKMAG00000003201)	hsd17b12b (ENSKMAG00000003337) #7	ENSKMAG00000003407	LRRC4C (ENSKMAG00000003421)	apip (ENSKMAG00000003435)	slc1a2a (ENSKMAG00000003466)	slc35c1 (ENSKMAG00000003507) #20	chst1 (ENSKMAG00000003525) #19	ENSKMAG00000003542	MAPK8IP1 (ENSKMAG00000003560) #22	ENSKMAG00000003582	lrp4 (ENSKMAG00000003642)	cyb5r4 (ENSKMAG00000003821)	ENSKMAG00000003833	sim1a (ENSKMAG00000003860)	ASCC3 (ENSKMAG00000003953)	ENSKMAG00000004094
Turquoise killifish	MODERN SPECIES	1616	kcnq1.1 (ENSNFUG00015009769)	ENSNFUG00015009716	apip (ENSNFUG00015009611)	slc1a2a (ENSNFUG00015008803)	SLC35C1 (ENSNFUG00015008744) #20	ENSNFUG00015008742	CHST1 (ENSNFUG00015008741) #19	ENSNFUG00015008739	ENSNFUG00015008734	ENSNFUG00015008733	Nfu_g_1_003199 (ENSNFUG00015008728)	nkx2.5 (ENSNFUG00015008727)	BNIP1A (ENSNFUG00015008720)	ATPV0E1 (ENSNFUG00015008714)	RPL26 (ENSNFUG00015008711)	MAPK8IP1 (ENSNFUG00015008703) #22	ENSNFUG00015008697	ENSNFUG00015008695	ENSNFUG00015008690	CABZ01083440.1 (ENSNFUG00015007483)	ENSNFUG00015007340	ENSNFUG00015007337	ENSNFUG00015007333	ENSNFUG00015007332	ENSNFUG00015007327	NELL1 (ENSNFUG00015006562)	ENSNFUG00015006470	slc6a5 (ENSNFUG00015006314)	PRMT3 (ENSNFUG00015006258)	HTATIP2 (ENSNFUG00015006232)	OLA.2304 (ENSNFUG00015006227)
Cyprinodontoidei	ANCESTRAL SPECIES	6	ENSGT00940000154996.a.b.b	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00530000068132	ENSGT00940000155379.g.a	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d
NAME_4	ANCESTRAL SPECIES	66	ENSGT00390000013180	ENSGT00940000154996.a.b.b	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A.ac.b	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d
Mummichog	MODERN SPECIES	2279														chst1 (ENSFHEG00000020880) #19	ENSFHEG00000020899	MAPK8IP1 (ENSFHEG00000020948) #22	ENSFHEG00000021031	lrp4 (ENSFHEG00000021307)	ENSFHEG00000021337	NELL1 (ENSFHEG00000021393)	slc6a5 (ENSFHEG00000021451)	prmt3 (ENSFHEG00000021475)	htatip2 (ENSFHEG00000021519)	dbx1a (ENSFHEG00000021545)	NAV2 (ENSFHEG00000022260)	csrp3 (ENSFHEG00000022329)	zdhhc13 (ENSFHEG00000022440)	mpped2a (ENSFHEG00000022477)	ENSFHEG00000022514	ENSFHEG00000022562	NR2E3 (ENSFHEG00000022629)
Sheepshead minnow	MODERN SPECIES	571								hsd17b12b (ENSCVAG00000004355) #7	ENSCVAG00000004335	LRRC4C (ENSCVAG00000004328)	apip (ENSCVAG00000004317)	slc1a2a (ENSCVAG00000004291)	slc35c1 (ENSCVAG00000004269) #20	chst1 (ENSCVAG00000004261) #19	ENSCVAG00000004252	MAPK8IP1 (ENSCVAG00000004240) #22	ENSCVAG00000004203
Poeciliinae	ANCESTRAL SPECIES	13	ENSGT00940000154996.a.b.b	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00530000068132	ENSGT00940000155379.g.a	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d
Poecilia	ANCESTRAL SPECIES	4	ENSGT00940000154996.a.b.b	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00530000068132	ENSGT00940000155379.g.a	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.a.a.b.b.b.a.a	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f
NAME_6	ANCESTRAL SPECIES	307			ENSGT00940000164990.d.c	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00530000068132	ENSGT00940000155379.g.a	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f
Amazon molly	MODERN SPECIES	372	ENSPFOG00000012469	chga (ENSPFOG00000012501)	ccn2a (ENSPFOG00000012551)	STX7 (ENSPFOG00000012608)	leg1.1 (ENSPFOG00000012656)	dpf3 (ENSPFOG00000012692)	wdr21 (ENSPFOG00000012756)	ZFYVE1 (ENSPFOG00000012865)	pigh (ENSPFOG00000012921)	rhov (ENSPFOG00000012938)	vps18 (ENSPFOG00000012960)	ino80 (ENSPFOG00000013082)	chac1 (ENSPFOG00000013506)	dll4 (ENSPFOG00000013522)	ENSPFOG00000022554	MAPK8IP1 (ENSPFOG00000013613) #22	ENSPFOG00000013690
Sailfin molly	MODERN SPECIES	558														chst1 (ENSPLAG00000004802) #19	ENSPLAG00000004798	MAPK8IP1 (ENSPLAG00000004781) #22	ENSPLAG00000004760
Guppy	MODERN SPECIES	455															ENSPREG00000020315	MAPK8IP1 (ENSPREG00000020263) #22	ENSPREG00000020229	lrp4 (ENSPREG00000020107)	ENSPREG00000020051	NELL1 (ENSPREG00000019953)	slc6a5 (ENSPREG00000019890)	prmt3 (ENSPREG00000019857)	htatip2 (ENSPREG00000019845)	dbx1a (ENSPREG00000019836)	ENSPREG00000019829	NAV2 (ENSPREG00000019505)	e2f8 (ENSPREG00000019385)	csrp3 (ENSPREG00000019363)	zdhhc13 (ENSPREG00000019340)	mpped2a (ENSPREG00000019313)	ENSPREG00000019289
Platyfish	MODERN SPECIES	18	luzp2 (ENSXMAG00000025139)	lingo1b (ENSXMAG00000011734)	kcnq1.1 (ENSXMAG00000011736)	ENSXMAG00000022786	trpm5 (ENSXMAG00000011779)	traf6 (ENSXMAG00000011827)	ttc17 (ENSXMAG00000011837)	hsd17b12b (ENSXMAG00000011880) #7	ENSXMAG00000023283	LRRC4C (ENSXMAG00000019680)	apip (ENSXMAG00000001487)	slc1a2a (ENSXMAG00000001471)	slc35c1 (ENSXMAG00000001466) #20	chst1 (ENSXMAG00000020315) #19	ENSXMAG00000001456	MAPK8IP1 (ENSXMAG00000027053) #22	lrp4 (ENSXMAG00000001380)	ENSXMAG00000023927	NELL1 (ENSXMAG00000001374)	slc6a5 (ENSXMAG00000010152)	prmt3 (ENSXMAG00000010154)	htatip2 (ENSXMAG00000010179)	dbx1a (ENSXMAG00000010186)	NAV2 (ENSXMAG00000010189)	ENSXMAG00000024557	e2f8 (ENSXMAG00000010237)	csrp3 (ENSXMAG00000027973)	zdhhc13 (ENSXMAG00000010253)	mpped2a (ENSXMAG00000010273)	ENSXMAG00000019869	ENSXMAG00000010292
Percomorphaceae_C	ANCESTRAL SPECIES	11	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00530000068132	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##37	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000157530.b.a	ENSGT00960000187709	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000181004	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d
Eupercaria	ANCESTRAL SPECIES	14	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00530000068132	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##37	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000157530.b.a	ENSGT00960000187709	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d
Tetraodontidae	ANCESTRAL SPECIES	4	ENSGT00940000154996.a.b.b	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##37	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d
Fugu	MODERN SPECIES	4	lingo1b (ENSTRUG00000016358)	kcnq1.1 (ENSTRUG00000016351)	ENSTRUG00000022458	trpm5 (ENSTRUG00000016316)	traf6 (ENSTRUG00000016306)	ttc17 (ENSTRUG00000016281)	hsd17b12b (ENSTRUG00000016257) #7	ENSTRUG00000032668	LRRC4C (ENSTRUG00000016255)	apip (ENSTRUG00000016253)	slc1a2a (ENSTRUG00000016239)	ENSTRUG00000016200 ##37	slc35c1 (ENSTRUG00000022396) #20	chst1 (ENSTRUG00000016194) #19	ENSTRUG00000016184	MAPK8IP1 (ENSTRUG00000021709) #22	ENSTRUG00000016170	ENSTRUG00000020682	NELL1 (ENSTRUG00000016017)	slc6a5 (ENSTRUG00000015944)	prmt3 (ENSTRUG00000015904)	htatip2 (ENSTRUG00000015893)	dbx1a (ENSTRUG00000015886)	NAV2 (ENSTRUG00000027383)	e2f8 (ENSTRUG00000015792)	csrp3 (ENSTRUG00000015766)	zdhhc13 (ENSTRUG00000015707)	mpped2a (ENSTRUG00000015686)	ENSTRUG00000020949	ENSTRUG00000015637	NR2E3 (ENSTRUG00000015582)
Tetraodon	MODERN SPECIES	20	bbox1 (ENSTNIG00000009592)	fibinb (ENSTNIG00000009593)	lingo1b (ENSTNIG00000009594)	kcnq1.1 (ENSTNIG00000009595)	trpm5 (ENSTNIG00000009596)	traf6 (ENSTNIG00000009597)	ttc17 (ENSTNIG00000009598)	hsd17b12b (ENSTNIG00000009599) #7	LRRC4C (ENSTNIG00000009600)	apip (ENSTNIG00000009601)	slc1a2a (ENSTNIG00000009602)	ENSTNIG00000009603 ##37	slc35c1 (ENSTNIG00000009604) #20	chst1 (ENSTNIG00000009605) #19	ENSTNIG00000009606	MAPK8IP1 (ENSTNIG00000009607) #22	ENSTNIG00000000788	lrp4 (ENSTNIG00000009608)	NELL1 (ENSTNIG00000009609)	slc6a5 (ENSTNIG00000009610)	prmt3 (ENSTNIG00000009611)	htatip2 (ENSTNIG00000009612)	dbx1a (ENSTNIG00000009613)	NAV2 (ENSTNIG00000009614)	e2f8 (ENSTNIG00000009615)	csrp3 (ENSTNIG00000009616)	zdhhc13 (ENSTNIG00000002121)	mpped2a (ENSTNIG00000005247)	ENSTNIG00000005152	ENSTNIG00000005151	NR2E3 (ENSTNIG00000005150)
Eupecaria_A	ANCESTRAL SPECIES	15	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00530000068132	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##37	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000157530.b.a	ENSGT00960000187709	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d
Ballan wrasse	MODERN SPECIES	286								apip (ENSLBEG00000019459)	slc1a2a (ENSLBEG00000019487)	PAMR1 (ENSLBEG00000019518) ##37	slc35c1 (ENSLBEG00000019538) #20	chst1 (ENSLBEG00000019555) #19	ENSLBEG00000019565	ENSLBEG00000019598	ENSLBEG00000019689	MAPK8IP1 (ENSLBEG00000019704) #22
Eupecaria_B	ANCESTRAL SPECIES	15	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00530000068132	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##37	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000157530.b.a	ENSGT00960000187709	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d
Eupecaria_C	ANCESTRAL SPECIES	11	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##37	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000157530.b.a	ENSGT00960000187709	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00810000125439.A	ENSGT00940000163467.a.b.b.a.b	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	7	ENSGT00940000164990.d	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##37	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000157530.b.a	ENSGT00960000187709	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d
European seabass	MODERN SPECIES	18	trpm5 (ENSDLAG00005022970)	ENSDLAG00005023002	ttc17 (ENSDLAG00005023010)	hsd17b12b (ENSDLAG00005023065) #7	ENSDLAG00005023114	ENSDLAG00005031274	ENSDLAG00005028663	apip (ENSDLAG00005023121)	slc1a2a (ENSDLAG00005023133)	ENSDLAG00005023170 ##37	ENSDLAG00005033046 #20	ENSDLAG00005027746 #19	ENSDLAG00005031403	ENSDLAG00005023185	ENSDLAG00005023230	ENSDLAG00005026530 #22	ENSDLAG00005031681	ENSDLAG00005030258	ENSDLAG00005012296	NELL1 (ENSDLAG00005009953)	ENSDLAG00005012301	slc6a5 (ENSDLAG00005012316)	prmt3 (ENSDLAG00005012846)	htatip2 (ENSDLAG00005012965)	dbx1a (ENSDLAG00005012977)	NAV2 (ENSDLAG00005013065)	e2f8 (ENSDLAG00005015998)	csrp3 (ENSDLAG00005032855)	zdhhc13 (ENSDLAG00005016050)	mpped2a (ENSDLAG00005017487)	ENSDLAG00005026438
Large yellow croaker	MODERN SPECIES	480	kcnq1.1 (ENSLCRG00005014622)	ENSLCRG00005014626	trpm5 (ENSLCRG00005014627)	traf6 (ENSLCRG00005014629)	ttc17 (ENSLCRG00005014684)	hsd17b12b (ENSLCRG00005014694) #7	ENSLCRG00005014704	LRRC4C (ENSLCRG00005014705)	APIP (ENSLCRG00005014706)	slc1a2a (ENSLCRG00005014732)	ENSLCRG00005014870 ##37	slc35c1 (ENSLCRG00005014871) #20	chst1 (ENSLCRG00005014872) #19	ENSLCRG00005014873	ENSLCRG00005014874	MAPK8IP1 (ENSLCRG00005014875) #22	A3GALT2 (ENSLCRG00005014876)	lrp4 (ENSLCRG00005014902)	NELL1 (ENSLCRG00005016259)	ENSLCRG00005016530	slc6a5 (ENSLCRG00005016535)	prmt3 (ENSLCRG00005016606)	TNNT3 (ENSLCRG00005016828)	ENSLCRG00005016834	ENSLCRG00005016836	ENSLCRG00005000205	foxr1 (ENSLCRG00005000261)	atp6v0d1 (ENSLCRG00005000233)	ENSLCRG00005000277	ENSLCRG00005000286	c1qtnf4 (ENSLCRG00005000291)
Gilthead seabream	MODERN SPECIES	18	ENSSAUG00010023855	trpm5 (ENSSAUG00010023856)	traf6 (ENSSAUG00010023857)	ttc17 (ENSSAUG00010023858)	hsd17b12b (ENSSAUG00010023900) #7	ENSSAUG00010023901	LRRC4C (ENSSAUG00010023903)	apip (ENSSAUG00010023905)	slc1a2a (ENSSAUG00010023921)	PAMR1 (ENSSAUG00010023923) ##37	slc35c1 (ENSSAUG00010023924) #20	chst1 (ENSSAUG00010023926) #19	ENSSAUG00010023927	ENSSAUG00010023928	ENSSAUG00010023929	MAPK8IP1 (ENSSAUG00010023930) #22	ENSSAUG00010004148	lrp4 (ENSSAUG00010004401)	NELL1 (ENSSAUG00010008045)	ENSSAUG00010010809	ENSSAUG00010010810	slc6a5 (ENSSAUG00010010819)	prmt3 (ENSSAUG00010011691)	htatip2 (ENSSAUG00010011716)	dbx1a (ENSSAUG00010011720)	NAV2 (ENSSAUG00010011732)	e2f8 (ENSSAUG00010011743)	csrp3 (ENSSAUG00010011751)	zdhhc13 (ENSSAUG00010011756)	mpped2a (ENSSAUG00010011765)	ENSSAUG00010011775
Perciformes	ANCESTRAL SPECIES	15	ENSGT00940000154996.a.b.b	ENSGT00940000164990.d	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00530000068132	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##37	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d
Perciformes_a	ANCESTRAL SPECIES	13	ENSGT00390000013180	ENSGT00940000154996.a.b.b	ENSGT00940000164990.d	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##37	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d
Channel bull blenny	MODERN SPECIES	17	ENSCGOG00000002213	trpm5 (ENSCGOG00000002202)	traf6 (ENSCGOG00000002157)	ttc17 (ENSCGOG00000001962)	ENSCGOG00000001946	hsd17b12b (ENSCGOG00000001890) #7	ENSCGOG00000001886	LRRC4C (ENSCGOG00000001884)	apip (ENSCGOG00000001852)	slc1a2a (ENSCGOG00000001849)	ENSCGOG00000001839 ##37	slc35c1 (ENSCGOG00000001834) #20	chst1 (ENSCGOG00000001830) #19	ENSCGOG00000001815	ENSCGOG00000001811	MAPK8IP1 (ENSCGOG00000001798) #22	ENSCGOG00000001792	lrp4 (ENSCGOG00000001539)	ENSCGOG00000001528	NELL1 (ENSCGOG00000001335)	ENSCGOG00000001259	slc6a5 (ENSCGOG00000001258)	prmt3 (ENSCGOG00000001228)	htatip2 (ENSCGOG00000001220)	dbx1a (ENSCGOG00000001219)	ENSCGOG00000001218	NAV2 (ENSCGOG00000001167)	e2f8 (ENSCGOG00000001160)	csrp3 (ENSCGOG00000001159)	zdhhc13 (ENSCGOG00000001121)	mpped2a (ENSCGOG00000001116)
Pike perch	MODERN SPECIES	100																MAPK8IP1 (ENSSLUG00000025830) #22	ENSSLUG00000025828	SNAP25 (ENSSLUG00000025825)	LRRC28 (ENSSLUG00000025824)	igf1rb (ENSSLUG00000025493)	ap3s2 (ENSSLUG00000025346)	ANPEP (ENSSLUG00000025307)	ANPEP (ENSSLUG00000025113)	mespaa (ENSSLUG00000025043)	mespba (ENSSLUG00000025038)	sv2ba (ENSSLUG00000025032)	ENSSLUG00000025016	NTRK3 (ENSSLUG00000024999)	mrpl46 (ENSSLUG00000024994)	mrps11 (ENSSLUG00000024992)	PDPR (ENSSLUG00000024972)
Cottioidei	ANCESTRAL SPECIES	13	ENSGT00940000154996.a.b.b	ENSGT00940000164990.d	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00530000068132	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##37	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d	ENSGT00940000156926.d
Lumpfish	MODERN SPECIES	18	luzp2 (ENSCLMG00005000698)	lingo1b (ENSCLMG00005000695)	kcnq1.1 (ENSCLMG00005000690)	ENSCLMG00005000686	trpm5 (ENSCLMG00005000684)	traf6 (ENSCLMG00005000677)	ttc17 (ENSCLMG00005000667)	hsd17b12b (ENSCLMG00005000666) #7	ENSCLMG00005000663	LRRC4C (ENSCLMG00005000661)	apip (ENSCLMG00005000659)	slc1a2a (ENSCLMG00005000655)	PAMR1 (ENSCLMG00005000650) ##37	slc35c1 (ENSCLMG00005000644) #20	ENSCLMG00005000620	MAPK8IP1 (ENSCLMG00005000568) #22	A3GALT2 (ENSCLMG00005000561)	lrp4 (ENSCLMG00005000551)	ENSCLMG00005000542	NELL1 (ENSCLMG00005000055)	slc6a5 (ENSCLMG00005022683)	prmt3 (ENSCLMG00005022681)	htatip2 (ENSCLMG00005022680)	dbx1a (ENSCLMG00005022679)	NAV2 (ENSCLMG00005022639)	e2f8 (ENSCLMG00005022617)	csrp3 (ENSCLMG00005022611)	zdhhc13 (ENSCLMG00005022516)	mpped2a (ENSCLMG00005022511)	ENSCLMG00005022510	ENSCLMG00005022507
Stickleback	MODERN SPECIES	1	ENSGACG00000017159	luzp2 (ENSGACG00000017158)	lingo1b (ENSGACG00000017157)	kcnq1.1 (ENSGACG00000017155)	trpm5 (ENSGACG00000017149)	traf6 (ENSGACG00000017142)	ttc17 (ENSGACG00000017137)	hsd17b12b (ENSGACG00000017131) #7	LRRC4C (ENSGACG00000017129)	apip (ENSGACG00000017125)	ENSGACG00000017123	slc1a2a (ENSGACG00000017121)	slc35c1 (ENSGACG00000017116) #20	chst1 (ENSGACG00000017115) #19	ENSGACG00000017112	MAPK8IP1 (ENSGACG00000017110) #22	A3GALT2 (ENSGACG00000017105)	lrp4 (ENSGACG00000017100)	NELL1 (ENSGACG00000017098)	slc6a5 (ENSGACG00000017096)	prmt3 (ENSGACG00000017094)	htatip2 (ENSGACG00000017092)	NAV2 (ENSGACG00000017087)	e2f8 (ENSGACG00000017086)	csrp3 (ENSGACG00000017082)	zdhhc13 (ENSGACG00000017075)	mpped2a (ENSGACG00000017073)	ENSGACG00000017072	ENSGACG00000017063	NR2E3 (ENSGACG00000017060)	slc22a18 (ENSGACG00000017056)
Percomorphaceae_D	ANCESTRAL SPECIES	11	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##37	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000157530.b.a	ENSGT00960000187709	ENSGT00940000163916	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000181004	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f
Carangaria	ANCESTRAL SPECIES	11	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##37	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000157530.b.a	ENSGT00960000187709	ENSGT00940000163916	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d
Pleuronectoidei	ANCESTRAL SPECIES	39	ENSGT00940000154996.a.b.b	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##37	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000157530.b.a	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d
Tongue sole	MODERN SPECIES	15	trpm5 (ENSCSEG00000003046)	ENSCSEG00000003033	kcnq1.1 (ENSCSEG00000003017)	lingo1b (ENSCSEG00000003013)	luzp2 (ENSCSEG00000003000)	ENSCSEG00000002996	fibinb (ENSCSEG00000002993)	bbox1 (ENSCSEG00000002986)	LRRC4C (ENSCSEG00000002984)	apip (ENSCSEG00000002980)	slc1a2a (ENSCSEG00000002968)	slc35c1 (ENSCSEG00000002963) #20	KLHL10 (ENSCSEG00000002543)	chst1 (ENSCSEG00000002539) #19	ENSCSEG00000002538	MAPK8IP1 (ENSCSEG00000002524) #22	ENSCSEG00000002517	A3GALT2 (ENSCSEG00000002498)	ENSCSEG00000002493	ENSCSEG00000002491	ENSCSEG00000002488	ENSCSEG00000002484	lrp4 (ENSCSEG00000002418)	GAS2 (ENSCSEG00000002394)	slc17a6b (ENSCSEG00000002260)	ano5b (ENSCSEG00000002239)	IGDCC3 (ENSCSEG00000002201)	ENSCSEG00000002192	cilp (ENSCSEG00000002181)	eif3jb (ENSCSEG00000002171)	ENSCSEG00000002157
Turbot	MODERN SPECIES	17	ENSSMAG00000009190	ENSSMAG00000024216	kcnq1.1 (ENSSMAG00000009139)	ENSSMAG00000009130	trpm5 (ENSSMAG00000008987)	TRAF6 (ENSSMAG00000008957)	ttc17 (ENSSMAG00000008833)	hsd17b12b (ENSSMAG00000008774) #7	apip (ENSSMAG00000008751)	slc1a2a (ENSSMAG00000008734)	ENSSMAG00000008725 ##37	ENSSMAG00000029408 #20	ENSSMAG00000008702 #19	ENSSMAG00000008698	ENSSMAG00000008677	ENSSMAG00000008616 #22	ENSSMAG00000008605	ENSSMAG00000008497	ENSSMAG00000008480	NELL1 (ENSSMAG00000008339)	slc6a5 (ENSSMAG00000008312)	prmt3 (ENSSMAG00000008265)	ENSSMAG00000008258	htatip2 (ENSSMAG00000008235)	dbx1a (ENSSMAG00000023716)	NAV2 (ENSSMAG00000008150)	e2f8 (ENSSMAG00000008106)	csrp3 (ENSSMAG00000008056)	zdhhc13 (ENSSMAG00000008013)	mpped2a (ENSSMAG00000033645)	ENSSMAG00000007996
Carangaria_A	ANCESTRAL SPECIES	19	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##37	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000157530.b.a	ENSGT00960000187709	ENSGT00940000163916	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d
Barramundi perch	MODERN SPECIES	96	ENSLCAG00010018606	trpm5 (ENSLCAG00010018591)	traf6 (ENSLCAG00010018578)	ttc17 (ENSLCAG00010018377)	hsd17b12b (ENSLCAG00010018345) #7	ENSLCAG00010018339	LRRC4C (ENSLCAG00010018337)	apip (ENSLCAG00010018323)	slc1a2a (ENSLCAG00010018316)	ENSLCAG00010018310 ##37	slc35c1 (ENSLCAG00010018307) #20	chst1 (ENSLCAG00010018305) #19	ENSLCAG00010018302	ENSLCAG00010018301	ENSLCAG00010018298	MAPK8IP1 (ENSLCAG00010018292) #22	ENSLCAG00010018289	lrp4 (ENSLCAG00010018047)	ENSLCAG00010017973	NELL1 (ENSLCAG00010017942)	slc6a5 (ENSLCAG00010017918)	prmt3 (ENSLCAG00010017909)	htatip2 (ENSLCAG00010017906)	dbx1a (ENSLCAG00010017904)	ENSLCAG00010017900	NAV2 (ENSLCAG00010017798)	e2f8 (ENSLCAG00010017767)	csrp3 (ENSLCAG00010017763)	zdhhc13 (ENSLCAG00010017744)	mpped2a (ENSLCAG00010017716)	ENSLCAG00010017710
Seriola	ANCESTRAL SPECIES	30	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##37	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00940000157530.b.a	ENSGT00960000187709	ENSGT00940000163916	ENSGT00940000157089.B #22	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d	ENSGT00940000156926.d	ENSGT00940000160333
Yellowtail amberjack	MODERN SPECIES	2699								apip (ENSSLDG00000003944)	slc1a2a (ENSSLDG00000003966)	PAMR1 (ENSSLDG00000004029) ##37	slc35c1 (ENSSLDG00000004092) #20	chst1 (ENSSLDG00000004108) #19	ENSSLDG00000004126	ENSSLDG00000004141	ENSSLDG00000004158	MAPK8IP1 (ENSSLDG00000004194) #22
Greater amberjack	MODERN SPECIES	3	kcnq1.1 (ENSSDUG00000015239)	ENSSDUG00000015273	trpm5 (ENSSDUG00000015291)	traf6 (ENSSDUG00000015351)	ttc17 (ENSSDUG00000015381)	hsd17b12b (ENSSDUG00000015488) #7	LRRC4C (ENSSDUG00000015521)	apip (ENSSDUG00000015532)	slc1a2a (ENSSDUG00000015573)	ENSSDUG00000015599 ##37	slc35c1 (ENSSDUG00000015611) #20	chst1 (ENSSDUG00000015618) #19	ENSSDUG00000015619	ENSSDUG00000015638	ENSSDUG00000015701	MAPK8IP1 (ENSSDUG00000015714) #22	lrp4 (ENSSDUG00000015763)	NELL1 (ENSSDUG00000015920)	ENSSDUG00000015986	ENSSDUG00000015990	slc6a5 (ENSSDUG00000016016)	prmt3 (ENSSDUG00000016148)	htatip2 (ENSSDUG00000016210)	dbx1a (ENSSDUG00000016225)	NAV2 (ENSSDUG00000016252)	e2f8 (ENSSDUG00000016327)	csrp3 (ENSSDUG00000016350)	zdhhc13 (ENSSDUG00000016374)	mpped2a (ENSSDUG00000016439)	ENSSDUG00000016457	ENSSDUG00000016485
Anabantaria	ANCESTRAL SPECIES	11	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00940000154234.a.d ##37	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00960000187709	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000181004	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f
Zig-zag eel	MODERN SPECIES	17	ENSMAMG00000014980	kcnq1.1 (ENSMAMG00000015000)	ENSMAMG00000015050	trpm5 (ENSMAMG00000015080)	ENSMAMG00000027515	ttc17 (ENSMAMG00000015309)	hsd17b12b (ENSMAMG00000015426) #7	ENSMAMG00000025683	ENSMAMG00000015494	apip (ENSMAMG00000015506)	slc1a2a (ENSMAMG00000015526)	ENSMAMG00000015550 ##37	ENSMAMG00000025042 #20	ENSMAMG00000015586 #19	ENSMAMG00000015588	ENSMAMG00000015594 #22	ENSMAMG00000015633	ENSMAMG00000015657	ENSMAMG00000015820	NELL1 (ENSMAMG00000015789)	slc6a5 (ENSMAMG00000015848)	prmt3 (ENSMAMG00000015896)	htatip2 (ENSMAMG00000015926)	dbx1a (ENSMAMG00000015940)	ENSMAMG00000016183	NAV2 (ENSMAMG00000015959)	e2f8 (ENSMAMG00000016200)	csrp3 (ENSMAMG00000016232)	zdhhc13 (ENSMAMG00000016250)	mpped2a (ENSMAMG00000016266)	ENSMAMG00000026458
Anabantoidei	ANCESTRAL SPECIES	8	ENSGT00390000013180	ENSGT00940000154996.a.b.b	ENSGT00940000164990.d	ENSGT00940000167611	ENSGT00940000160588	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a #7	ENSGT00940000157405.c.b	ENSGT00390000001680	ENSGT00940000155379.g.a	ENSGT00390000013315 #20	ENSGT00940000161262.a #19	ENSGT00940000157530.b.b	ENSGT00960000187709	ENSGT00940000157089.B #22	ENSGT00950000182858.C.f	ENSGT00940000158287	ENSGT00940000163467.a.b.b.a.b	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00940000160967.f	ENSGT00940000153246.a.a.a.d
Climbing perch	MODERN SPECIES	16	ENSATEG00000021061	ENSATEG00000021085	trpm5 (ENSATEG00000021113)	ENSATEG00000021148	ttc17 (ENSATEG00000021172)	ENSATEG00000027497	hsd17b12b (ENSATEG00000021238) #7	LRRC4C (ENSATEG00000021299)	APIP (ENSATEG00000027665)	slc1a2a (ENSATEG00000021313)	ENSATEG00000029077	ENSATEG00000030098 #20	ENSATEG00000021360 #19	ENSATEG00000021366	ENSATEG00000028460	ENSATEG00000021394 #22	ENSATEG00000021428	ENSATEG00000021458	NELL1 (ENSATEG00000021543)	ENSATEG00000021560	slc6a5 (ENSATEG00000021586)	prmt3 (ENSATEG00000021598)	htatip2 (ENSATEG00000021609)	dbx1a (ENSATEG00000021616)	NAV2 (ENSATEG00000021634)	csrp3 (ENSATEG00000021724)	zdhhc13 (ENSATEG00000021742)	mpped2a (ENSATEG00000021765)	ENSATEG00000021774	ENSATEG00000021798	ENSATEG00000021837
Siamese fighting fish	MODERN SPECIES	14	fibinb (ENSBSLG00000011752)	ENSBSLG00000011712	luzp2 (ENSBSLG00000011625)	lingo1b (ENSBSLG00000011592)	KCNQ1 (ENSBSLG00000010746)	ENSBSLG00000010478	trpm5 (ENSBSLG00000010445)	traf6 (ENSBSLG00000010440)	ttc17 (ENSBSLG00000010086)	hsd17b12b (ENSBSLG00000009741) #7	LRRC4C (ENSBSLG00000009547)	apip (ENSBSLG00000009527)	slc1a2a (ENSBSLG00000009104)	slc35c1 (ENSBSLG00000009076) #20	ENSBSLG00000009050	ENSBSLG00000008955 #22	A3GALT2 (ENSBSLG00000008699)	ENSBSLG00000008692	lrp4 (ENSBSLG00000007912)	FRMD5 (ENSBSLG00000006671)	wdr76 (ENSBSLG00000005796)	RASGRF1 (ENSBSLG00000005365)	si:ch211-107o10.3 (ENSBSLG00000005247)	idh2 (ENSBSLG00000004876)	ZNF710 (ENSBSLG00000004830)	ENSBSLG00000004779	HERC1 (ENSBSLG00000004100)	ENSBSLG00000004079	ENSBSLG00000004076	ENSBSLG00000004066	ENSBSLG00000004060
Pinecone sodierfish	MODERN SPECIES	17	cep89 (ENSMMDG00005013375)	rhpn2 (ENSMMDG00005012374)	slc7a10a (ENSMMDG00005012358)	lrp3 (ENSMMDG00005012355)	zgc:92818 (ENSMMDG00005012354)	mylk3 (ENSMMDG00005012352)	orc6 (ENSMMDG00005012351)	vps35 (ENSMMDG00005012005)	hrh3 (ENSMMDG00005011947)	shcbp1 (ENSMMDG00005011760)	uqcrfs1 (ENSMMDG00005011753)	vstm2b (ENSMMDG00005011752)	ccnd1 (ENSMMDG00005011749)	lto1 (ENSMMDG00005011746)	ENSMMDG00005011744	MAPK8IP1 (ENSMMDG00005011743) #22	lrp4 (ENSMMDG00005011593)	ENSMMDG00005000755	NELL1 (ENSMMDG00005000287)	slc6a5 (ENSMMDG00005000196)	prmt3 (ENSMMDG00005000132)	htatip2 (ENSMMDG00005000108)	dbx1a (ENSMMDG00005000101)	ENSMMDG00005023868	NAV2 (ENSMMDG00005023843)	e2f8 (ENSMMDG00005023830)	csrp3 (ENSMMDG00005023826)	zdhhc13 (ENSMMDG00005023737)	mpped2a (ENSMMDG00005023721)	ENSMMDG00005023717	ENSMMDG00005023712
Cod	MODERN SPECIES	5	ENSGMOG00000032949	ENSGMOG00000008186	ENSGMOG00000008180	ENSGMOG00000008174	ENSGMOG00000012781	ENSGMOG00000012785	ENSGMOG00000026070	large2 (ENSGMOG00000014703) #25	ENSGMOG00000000810	ENSGMOG00000001070	ENSGMOG00000001091	ENSGMOG00000025653	rassf7b (ENSGMOG00000023443)	ENSGMOG00000017425	ascl1b (ENSGMOG00000027313)	ENSGMOG00000017397 #22	ENSGMOG00000009383	ENSGMOG00000009277	NELL1 (ENSGMOG00000031363)	slc6a5 (ENSGMOG00000002626)	prmt3 (ENSGMOG00000002570)	htatip2 (ENSGMOG00000002550)	dbx1a (ENSGMOG00000002488)	ENSGMOG00000028982	e2f8 (ENSGMOG00000019253)	csrp3 (ENSGMOG00000019248)	zdhhc13 (ENSGMOG00000019229)	mpped2a (ENSGMOG00000027425)	ENSGMOG00000032770	ENSGMOG00000019198	ENSGMOG00000019194
Protacanthopterygii	ANCESTRAL SPECIES																	ENSGT00940000157089.B #22
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	1900																ENSGT00940000157089.B.i #22	ENSGT00940000158287.h
Salmoninae_a	ANCESTRAL SPECIES	149	ENSGT00940000158298.f	ENSGT00390000014679.d.a	ENSGT00940000159201.i	ENSGT00390000016567.m.a	ENSGT00940000157801	ENSGT00940000157697	ENSGT00940000164048	ENSGT00940000156775.e	ENSGT00530000063669.b.b	ENSGT00940000159420	ENSGT00390000006845	ENSGT00390000016054.a	ENSGT00940000155095.i.a.d	ENSGT00950000183028.a.a.b	ENSGT00940000154317.a.b.a.c	ENSGT00940000157089.B.i #22	ENSGT00940000158287.h
Salmo	DUPLICATION
Salmo	ANCESTRAL SPECIES	27	ENSGT00940000158298.f	ENSGT00390000014679.d.a	ENSGT00940000159201.i	ENSGT00390000016567.m.a	ENSGT00940000157801	ENSGT00940000157697	ENSGT00940000164048	ENSGT00940000156775.e	ENSGT00530000063669.b.b	ENSGT00940000159420	ENSGT00390000006845	ENSGT00390000016054.a	ENSGT00940000155095.i.a.d	ENSGT00950000183028.a.a.b	ENSGT00940000154317.a.b.a.c	ENSGT00940000157089.B.i.a #22	ENSGT00940000158287.h	ENSGT00810000125439.A.l	ENSGT00940000154963.g.a.b	ENSGT00940000156825.j	ENSGT00940000164669.f	ENSGT00940000164526.a	ENSGT00940000158565.q	ENSGT00940000153561.b.a.a.b.y.b.a	ENSGT00950000182839.B.b.a.d	ENSGT00940000157462.C.c.a.j	ENSGT00940000161238.l.d	ENSGT00940000158758.i #25	ENSGT00940000154824.h.a	ENSGT00940000154022.a.a.k	ENSGT00940000157918.o.b
River trout	MODERN SPECIES	3	btbd9 (ENSSTUG00000005574)	zfand3 (ENSSTUG00000005665)	MDGA1 (ENSSTUG00000005707)	mocs1 (ENSSTUG00000006093)	DAAM2 (ENSSTUG00000006254)	kif6 (ENSSTUG00000006580)	kcnk5a (ENSSTUG00000006603)	fam184aa (ENSSTUG00000006610)	SYT14 (ENSSTUG00000006638)	gnmt (ENSSTUG00000006648)	manea (ENSSTUG00000006656)	fut9a (ENSSTUG00000006663)	fhl5 (ENSSTUG00000006667)	ENSSTUG00000006686	col10a1a (ENSSTUG00000006692)	MAPK8IP1 (ENSSTUG00000006698) #22	lrp4 (ENSSTUG00000006733)	ENSSTUG00000007403	NELL1 (ENSSTUG00000007502)	slc6a5 (ENSSTUG00000010531)	prmt3 (ENSSTUG00000012651)	slc39a1 (ENSSTUG00000012687)	ENSSTUG00000012701	CTTN (ENSSTUG00000012739)	ENSSTUG00000013013	rassf7b (ENSSTUG00000013048)	BRSK2 (ENSSTUG00000013107)	ENSSTUG00000013328	ENSSTUG00000013331	large2 (ENSSTUG00000013383) #25	KIFC3 (ENSSTUG00000014096)
Atlantic salmon	MODERN SPECIES	2	DAAM2 (ENSSSAG00000006847)	kif6 (ENSSSAG00000028036)	ENSSSAG00000103082	kcnk5 (ENSSSAG00000028208)	ENSSSAG00000028460	ENSSSAG00000029415	ENSSSAG00000119456	gnmt (ENSSSAG00000029625)	ENSSSAG00000108919 ##33	ENSSSAG00000029883	manea (ENSSSAG00000088022)	ENSSSAG00000089260	fhl5 (ENSSSAG00000030148)	ENSSSAG00000030457	ENSSSAG00000081834	ENSSSAG00000030520 #22	ENSSSAG00000031145	ENSSSAG00000103805	ENSSSAG00000040150	ENSSSAG00000047879	ENSSSAG00000048581	S39A1 (ENSSSAG00000048593)	ENSSSAG00000114542	ENSSSAG00000048604	ENSSSAG00000048727	ENSSSAG00000055872	ENSSSAG00000055972	ENSSSAG00000060109	ENSSSAG00000114815 #25	ENSSSAG00000121702	CNGB1 (ENSSSAG00000061103)
Salmo	ANCESTRAL SPECIES																	ENSGT00940000157089.B.i.b #22
Atlantic salmon	MODERN SPECIES	18	PPIC (ENSSSAG00000065198)	snx2 (ENSSSAG00000065248)	sncaip (ENSSSAG00000065341)	ENSSSAG00000065346	ENSSSAG00000088671	ENSSSAG00000109713	ENSSSAG00000065358	cmya5 (ENSSSAG00000121490)	ENSSSAG00000090027	ENSSSAG00000120104	tent2 (ENSSSAG00000105442)	ENSSSAG00000091228	homer1 (ENSSSAG00000065561)	otpb (ENSSSAG00000065781)	ENSSSAG00000122028	ENSSSAG00000065784 #22	ENSSSAG00000105171	ENSSSAG00000065807	ENSSSAG00000115174	ENSSSAG00000066206	ENSSSAG00000071775	slc6a5 (ENSSSAG00000072543)	prmt3 (ENSSSAG00000072690)	ENSSSAG00000098754	ENSSSAG00000072744	ENSSSAG00000104665	ENSSSAG00000088498	ENSSSAG00000073025	rassf7 (ENSSSAG00000073026)	ENSSSAG00000073034	ENSSSAG00000073059
Oncorhynchus	ANCESTRAL SPECIES	32	ENSGT00940000158298.f	ENSGT00390000014679.d.a	ENSGT00940000159201.i	ENSGT00390000016567.m.a	ENSGT00940000157801	ENSGT00940000157697	ENSGT00940000164048	ENSGT00940000156775.e	ENSGT00530000063669.b.b	ENSGT00940000159420	ENSGT00390000006845	ENSGT00390000016054.a	ENSGT00940000155095.i.a.d	ENSGT00950000183028.a.a.b	ENSGT00940000154317.a.b.a.c	ENSGT00940000157089.B.i #22	ENSGT00940000158287.h
Rainbow trout	DUPLICATION
Rainbow trout	MODERN SPECIES	18	ENSOMYG00000057070	ENSOMYG00000075070	ENSOMYG00000067560	ENSOMYG00000057665	dapk2a (ENSOMYG00000065478)	ENSOMYG00000038661	ENSOMYG00000063389	ENSOMYG00000054717	IDH3A (ENSOMYG00000022101)	rab8b (ENSOMYG00000054197)	trpm1a (ENSOMYG00000022182)	ENSOMYG00000060194	ENSOMYG00000058602	gtf2a2 (ENSOMYG00000065240)	ENSOMYG00000062581	ENSOMYG00000037466 #22	ENSOMYG00000071032	ENSOMYG00000072221 #22	ENSOMYG00000059272	ENSOMYG00000034180	ENSOMYG00000038139	fhl5 (ENSOMYG00000038128)	ENSOMYG00000038114	ENSOMYG00000038112	manea (ENSOMYG00000038109)	ENSOMYG00000038102	ENSOMYG00000038080	ENSOMYG00000038070	ENSOMYG00000038054	ENSOMYG00000058392	kcnk5a (ENSOMYG00000038017)
Rainbow trout	MODERN SPECIES	18	ENSOMYG00000067560	ENSOMYG00000057665	dapk2a (ENSOMYG00000065478)	ENSOMYG00000038661	ENSOMYG00000063389	ENSOMYG00000054717	IDH3A (ENSOMYG00000022101)	rab8b (ENSOMYG00000054197)	trpm1a (ENSOMYG00000022182)	ENSOMYG00000060194	ENSOMYG00000058602	gtf2a2 (ENSOMYG00000065240)	ENSOMYG00000062581	ENSOMYG00000037466 #22	ENSOMYG00000071032	ENSOMYG00000072221 #22	ENSOMYG00000059272	ENSOMYG00000034180	ENSOMYG00000038139	fhl5 (ENSOMYG00000038128)	ENSOMYG00000038114	ENSOMYG00000038112	manea (ENSOMYG00000038109)	ENSOMYG00000038102	ENSOMYG00000038080	ENSOMYG00000038070	ENSOMYG00000038054	ENSOMYG00000058392	kcnk5a (ENSOMYG00000038017)	ENSOMYG00000038002	kif6 (ENSOMYG00000037982)
Oncorhynchus_a	ANCESTRAL SPECIES	28	ENSGT00940000158298.f	ENSGT00390000014679.d.a	ENSGT00940000159201.i	ENSGT00390000016567.m.a	ENSGT00940000157801	ENSGT00940000157697	ENSGT00940000164048	ENSGT00940000156775.e	ENSGT00530000063669.b.b	ENSGT00940000159420	ENSGT00390000006845	ENSGT00390000016054.a	ENSGT00940000155095.i.a.d	ENSGT00950000183028.a.a.b	ENSGT00940000154317.a.b.a.c	ENSGT00940000157089.B.i #22	ENSGT00940000158287.h
Chinook salmon	MODERN SPECIES	3	SMAD4 (ENSOTSG00005042083)	ENSOTSG00005042113	ENSOTSG00005042114	PPIC (ENSOTSG00005042115)	ENSOTSG00005042116	ENSOTSG00005042117	kif6 (ENSOTSG00005042119)	kcnk5a (ENSOTSG00005042122)	fam184aa (ENSOTSG00005042123)	SYT14 (ENSOTSG00005042125)	gnmt (ENSOTSG00005042126)	manea (ENSOTSG00005042127)	fut9a (ENSOTSG00005042128)	fhl5 (ENSOTSG00005042129)	col10a1a (ENSOTSG00005042130)	MAPK8IP1 (ENSOTSG00005042131) #22	ENSOTSG00005042132	ranbp3b (ENSOTSG00005042133)	ENSOTSG00005042134	pnhd (ENSOTSG00005042135)	CIB3 (ENSOTSG00005042136)	mocs1 (ENSOTSG00005042138)	DAAM2 (ENSOTSG00005042176)	ENSOTSG00005044834	MDGA1 (ENSOTSG00005012389)	ENSOTSG00005012601	zfand3 (ENSOTSG00005012602)	btbd9 (ENSOTSG00005012603)	glo1 (ENSOTSG00005012607)	eprs1 (ENSOTSG00005012639)	spdya (ENSOTSG00005016673)
Coho salmon	MODERN SPECIES	28	ENSOKIG00005041675	MDGA1 (ENSOKIG00005040470)	mocs1 (ENSOKIG00005040105)	DAAM2 (ENSOKIG00005039460)	kif6 (ENSOKIG00005039253)	ENSOKIG00005039197	kcnk5a (ENSOKIG00005039185)	fam184aa (ENSOKIG00005039157)	SYT14 (ENSOKIG00005039135)	gnmt (ENSOKIG00005039118)	manea (ENSOKIG00005039113)	fut9a (ENSOKIG00005039106)	fhl5 (ENSOKIG00005039069)	col10a1a (ENSOKIG00005039061)	ENSOKIG00005039002	MAPK8IP1 (ENSOKIG00005038986) #22	plpp7a (ENSOKIG00005038972)	ENSOKIG00005038961	PPIC (ENSOKIG00005038940)	ENSOKIG00005038912	ENSOKIG00005038891	SMAD4 (ENSOKIG00005038755)	MAPKAPK5 (ENSOKIG00005038172)	ENSOKIG00005037266	ENSOKIG00005037189	ENSOKIG00005037182	RASEF (ENSOKIG00005036936)	atxn2 (ENSOKIG00005035911)	SH2B3 (ENSOKIG00005035854)	ENSOKIG00005035823	PRR16 (ENSOKIG00005035816)
Huchen	MODERN SPECIES	1152																MAPK8IP1 (ENSHHUG00000034117) #22	lrp4 (ENSHHUG00000034142)	ENSHHUG00000034214
Salmoninae	ANCESTRAL SPECIES	200	ENSGT00940000157592	ENSGT00940000155742.a.b	ENSGT00390000008748.a	ENSGT00390000009378	ENSGT00940000155852	ENSGT00940000159786.b	ENSGT00940000155798	ENSGT00390000001485	ENSGT00390000012355.A.a.a.a.a	ENSGT00940000155776.b	ENSGT00940000155831.bb	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00940000159952.a.a	ENSGT00940000157089.B.j #22	ENSGT00940000158287.g	ENSGT00390000014757.x	ENSGT00810000125439.A.k
Salmoninae_a	ANCESTRAL SPECIES	47	ENSGT00940000155742.a.b	ENSGT00390000008748.a	ENSGT00390000009378	ENSGT00940000155852	ENSGT00940000159786.b	ENSGT00940000155798	ENSGT00390000001485	ENSGT00390000012355.A.a.a.a.a	ENSGT00940000155776.b	ENSGT00940000155831.bb	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00940000159952.a.a	ENSGT00940000177848.b	ENSGT00940000157089.B.j #22	ENSGT00940000158287.g	ENSGT00390000014757.x	ENSGT00810000125439.A.k	ENSGT00940000154963.g.a.a	ENSGT00940000156825.i	ENSGT00940000164669.e	ENSGT00940000158565.r	ENSGT00940000153561.b.a.a.b.y.b.b	ENSGT00940000163916.p.b	ENSGT00950000182839.B.b.a.c	ENSGT00940000157462.C.c.a.i	ENSGT00940000157661.e.b.h	ENSGT00940000161238.l.c	ENSGT00940000158758.j #25	ENSGT00940000162283.b
Oncorhynchus	ANCESTRAL SPECIES		ENSGT00940000157592	ENSGT00940000155742.a.b	ENSGT00390000008748.a	ENSGT00390000009378	ENSGT00940000155852	ENSGT00940000155798	ENSGT00390000001485	ENSGT00390000012355.A.a.a.a.a	ENSGT00940000155776.b	ENSGT00940000155831.bb	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00940000159952.a.a	ENSGT00940000177848.b	ENSGT00940000157089.B.j #22	ENSGT00940000158287.g	ENSGT00390000014757.x	ENSGT00810000125439.A.k	ENSGT00940000154963.g.a.a	ENSGT00940000156825.i	ENSGT00940000164669.e	ENSGT00940000158565.r	ENSGT00940000153561.b.a.a.b.y.b.b	ENSGT00940000163916.p.b	ENSGT00950000182839.B.b.a.c	ENSGT00940000157462.C.c.a.i	ENSGT00940000157661.e.b.h	ENSGT00940000161238.l.c	ENSGT00940000158758.j #25	ENSGT00940000162283.b
Rainbow trout	MODERN SPECIES	27	ENSOMYG00000042453	ENSOMYG00000042474	ENSOMYG00000029686	ENSOMYG00000001222	ENSOMYG00000001277	ENSOMYG00000001330	ENSOMYG00000001383	cmya5 (ENSOMYG00000059165)	tent2 (ENSOMYG00000001690)	ENSOMYG00000065004	homer1b (ENSOMYG00000001923)	ENSOMYG00000049056	ENSOMYG00000002004	otpb (ENSOMYG00000002018)	ENSOMYG00000002051	ENSOMYG00000002102 #22	ENSOMYG00000002959	ENSOMYG00000073180	ENSOMYG00000065020	ENSOMYG00000004181	ENSOMYG00000005965	slc6a5 (ENSOMYG00000008086)	prmt3 (ENSOMYG00000008629)	ENSOMYG00000008738	ENSOMYG00000009421	ENSOMYG00000077344	ENSOMYG00000074580	ENSOMYG00000011052	rassf7b (ENSOMYG00000011058)	ENSOMYG00000011125	ENSOMYG00000011342
Oncorhynchus_a	ANCESTRAL SPECIES		ENSGT00940000157592	ENSGT00940000155742.a.b	ENSGT00390000008748.a	ENSGT00390000009378	ENSGT00940000155852	ENSGT00940000155798	ENSGT00390000001485	ENSGT00390000012355.A.a.a.a.a	ENSGT00940000155776.b	ENSGT00940000155831.bb	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00940000159952.a.a	ENSGT00940000177848.b	ENSGT00940000157089.B.j #22	ENSGT00940000158287.g	ENSGT00390000014757.x	ENSGT00810000125439.A.k	ENSGT00940000154963.g.a.a	ENSGT00940000156825.i	ENSGT00940000164669.e	ENSGT00940000158565.r	ENSGT00940000153561.b.a.a.b.y.b.b	ENSGT00940000163916.p.b	ENSGT00950000182839.B.b.a.c	ENSGT00940000157462.C.c.a.i	ENSGT00940000157661.e.b.h	ENSGT00940000161238.l.c	ENSGT00940000158758.j #25	ENSGT00940000162283.b
Coho salmon	MODERN SPECIES	22	ZNF608 (ENSOKIG00005019661)	CEP120 (ENSOKIG00005019683)	PRDM6 (ENSOKIG00005019721)	SNX2 (ENSOKIG00005019761)	sncaip (ENSOKIG00005019875)	ENSOKIG00005019886	ankrd34bb (ENSOKIG00005020096)	ENSOKIG00005020116	ENSOKIG00005020179	cmya5 (ENSOKIG00005020228)	tent2 (ENSOKIG00005020289)	homer1b (ENSOKIG00005020851)	ENSOKIG00005000007	otpb (ENSOKIG00005000029)	ENSOKIG00005000054	MAPK8IP1 (ENSOKIG00005000068) #22	lrp4 (ENSOKIG00005000443)	ENSOKIG00005000939	NELL1 (ENSOKIG00005001201)	slc6a5 (ENSOKIG00005001966)	prmt3 (ENSOKIG00005002480)	slc39a1 (ENSOKIG00005002802)	CTTN (ENSOKIG00005002872)	ENSOKIG00005003325	ENSOKIG00005003330	rassf7b (ENSOKIG00005003332)	BRSK2 (ENSOKIG00005003392)	ABTB2 (ENSOKIG00005003513)	ENSOKIG00005003542	large2 (ENSOKIG00005003653) #25	ENSOKIG00005004578
Salmo	ANCESTRAL SPECIES	30	ENSGT00940000155742.a.b	ENSGT00390000008748.a	ENSGT00390000009378	ENSGT00940000155852	ENSGT00940000159786.b	ENSGT00940000155798	ENSGT00390000001485	ENSGT00390000012355.A.a.a.a.a	ENSGT00940000155776.b	ENSGT00940000155831.bb	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00940000159952.a.a	ENSGT00940000177848.b	ENSGT00940000157089.B.j #22	ENSGT00940000158287.g	ENSGT00390000014757.x	ENSGT00810000125439.A.k	ENSGT00940000154963.g.a.a	ENSGT00940000156825.i	ENSGT00940000164669.e	ENSGT00940000158565.r	ENSGT00940000153561.b.a.a.b.y.b.b	ENSGT00960000187709	ENSGT00950000182839.B.b.a.c	ENSGT00940000157462.C.c.a.i	ENSGT00940000157661.e.b.h	ENSGT00940000161238.l.c	ENSGT00940000158758.j #25	ENSGT00940000162283.b
River trout	MODERN SPECIES	21	ZNF608 (ENSSTUG00000019950)	CEP120 (ENSSTUG00000019828)	PRDM6 (ENSSTUG00000019801)	PPIC (ENSSTUG00000019755)	SNX2 (ENSSTUG00000019638)	sncaip (ENSSTUG00000019613)	ankrd34bb (ENSSTUG00000019564)	ENSSTUG00000019545	ENSSTUG00000019415	cmya5 (ENSSTUG00000019292)	tent2 (ENSSTUG00000019077)	homer1b (ENSSTUG00000019033)	ENSSTUG00000019023	otpb (ENSSTUG00000019011)	ENSSTUG00000018997	MAPK8IP1 (ENSSTUG00000018959) #22	lrp4 (ENSSTUG00000018050)	ENSSTUG00000017807	NELL1 (ENSSTUG00000016334)	slc6a5 (ENSSTUG00000015956)	prmt3 (ENSSTUG00000015845)	slc39a1 (ENSSTUG00000015833)	CTTN (ENSSTUG00000015533)	ENSSTUG00000015519	ENSSTUG00000015498	ENSSTUG00000015490	rassf7b (ENSSTUG00000015487)	BRSK2 (ENSSTUG00000014505)	ABTB2 (ENSSTUG00000014441)	ENSSTUG00000014370	large2 (ENSSTUG00000013070) #25
Huchen	MODERN SPECIES	28												tent2 (ENSHHUG00000034180)	homer1b (ENSHHUG00000034168)	otpb (ENSHHUG00000034160)	lemd1 (ENSHHUG00000034147)	MAPK8IP1 (ENSHHUG00000034135) #22	lrp4 (ENSHHUG00000033926)	ENSHHUG00000033913	ENSHHUG00000033824	ENSHHUG00000033813	ENSHHUG00000033785
Spotted gar	MODERN SPECIES	262													ENSLOCG00000014650	slc35c1 (ENSLOCG00000014653) #20	cry2 (ENSLOCG00000014655) #21	MAPK8IP1 (ENSLOCG00000014667) #22	cstpp1 (ENSLOCG00000014671)	lrp4 (ENSLOCG00000014674)	ckap5 (ENSLOCG00000014683)
Elephant shark	MODERN SPECIES	1493	ENSCMIG00000001235	bmal1a (ENSCMIG00000001041)	btbd10a (ENSCMIG00000000943)	ENSCMIG00000000922	far1 (ENSCMIG00000000877)	ENSCMIG00000000845	ENSCMIG00000000830	cyb5r2 (ENSCMIG00000000728)	PPFIBP2 (ENSCMIG00000000376)	ENSCMIG00000000207	OLFML1 (ENSCMIG00000000202)	syt9b (ENSCMIG00000000189)	spon1a (ENSCMIG00000018390)	KIAA1549L (ENSCMIG00000018366)	hipk3b (ENSCMIG00000018357)	MAPK8IP1 (ENSCMIG00000018349) #22	arl14ep (ENSCMIG00000018345)	MPPED2 (ENSCMIG00000018343)	ENSCMIG00000018339	ENSCMIG00000018337	ENSCMIG00000018334	dnajc24 (ENSCMIG00000018333)	immp1l (ENSCMIG00000018332)	elp4 (ENSCMIG00000018323)	ENSCMIG00000018190	RCN1 (ENSCMIG00000018083)	ENSCMIG00000018081	wt1a (ENSCMIG00000018077)	eif3m (ENSCMIG00000018018)	ENSCMIG00000017997	ENSCMIG00000017995
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00940000157089.B #22
Lamprey	MODERN SPECIES	1859																MAPK8IP1 (ENSPMAG00000006483) #22	arsa (ENSPMAG00000006493)
Hagfish	MODERN SPECIES	87			ENSEBUG00000011533	chpt1 (ENSEBUG00000001781)	ENSEBUG00000014682	pold1 (ENSEBUG00000007380)	ENSEBUG00000001016	ENSEBUG00000009566	arl1 (ENSEBUG00000005739)	ENSEBUG00000006687	ENSEBUG00000002945	pwp1 (ENSEBUG00000009426)	ENSEBUG00000002501	ENSEBUG00000007401	ENSEBUG00000010941	ENSEBUG00000000849 #22	ENSEBUG00000003765	ENSEBUG00000010236	ENSEBUG00000008376	ENSEBUG00000008603	psmc2 (ENSEBUG00000014085)	ENSEBUG00000010998	polr2h (ENSEBUG00000008233)	ENSEBUG00000013340	ENSEBUG00000002194
Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000157089.A ##22
Gnathostomata	ANCESTRAL SPECIES																	ENSGT00940000157089.A ##22
Euteleostomi	ANCESTRAL SPECIES																	ENSGT00940000157089.A ##22
Actinopterygii	ANCESTRAL SPECIES																	ENSGT00940000157089.A ##22
Neopterygii	ANCESTRAL SPECIES																	ENSGT00940000157089.A ##22
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00940000157089.A ##22
Clupeocephala	ANCESTRAL SPECIES	16	ENSGT00940000163723.A.f.b	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000164361	ENSGT00730000111007.a.b	ENSGT00940000165480.a	ENSGT00940000165480.b	ENSGT00390000013260.A.a	ENSGT00940000157530.b.a	ENSGT00940000157530.b.b	ENSGT00390000013899.b	ENSGT00940000161262.a #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00940000157089.B #22	ENSGT00940000158287	ENSGT00390000014757	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00550000075025
Euteleosteomorpha	ANCESTRAL SPECIES	283				ENSGT00390000017790 #24	ENSGT00940000155568	ENSGT00940000163723.A.e	ENSGT00940000163723.A.f.b	ENSGT01050000244900.a.a.b.eb	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000164361	ENSGT00390000013899.b	ENSGT00940000161262.a #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935
Protacanthopterygii	ANCESTRAL SPECIES	206									ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000164361	ENSGT00390000013899.b	ENSGT00940000161262.a #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00940000158980
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	1	ENSGT00940000165054.A.c	ENSGT01030000234519.e.b.m.a	ENSGT00940000157475	ENSGT00950000182965.a.b.b.b	ENSGT00950000182965.a.b.a.a	ENSGT01030000234518.B.a.b.a.b	ENSGT01030000234539.a.a.b.a.b.a.a.k.a.a	ENSGT00940000158440.g.a	ENSGT00940000157505	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000153499.b.b.d.a.b.h.a	ENSGT00940000158146.a	ENSGT00940000161262.a.n #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.A.a ##22	ENSGT00940000154234.a.d ##37	ENSGT00940000155379.g.a	ENSGT00390000001680	ENSGT00940000157405.c.b	ENSGT00940000154860.a.a.d #7	ENSGT00390000006196.l	ENSGT00390000006196.k.b	ENSGT00940000166194.a.b	ENSGT00940000166194.a.a	ENSGT00940000155426	ENSGT00940000160588	ENSGT00940000162677.qc	ENSGT00940000161001	ENSGT00940000164990.d	ENSGT00940000154996.a.b.b
Salmoninae_a	ANCESTRAL SPECIES	1	ENSGT00940000155837.p.d	ENSGT00940000165054.A.c	ENSGT01030000234519.e.b.m.a	ENSGT00940000157475	ENSGT00950000182965.a.b.a.a.g	ENSGT00950000182965.a.b.a.a.h	ENSGT01030000234518.B.a.b.a.b	ENSGT01030000234539.a.a.b.a.b.a.a.k.a.a	ENSGT00940000158440.g.a	ENSGT00940000157505	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000158146.a.c.b	ENSGT00940000161262.a.n #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.A.a ##22	ENSGT00940000161814.g.b.g.d.b.a	ENSGT00390000014757.w.a	ENSGT00940000154963.h	ENSGT00940000158980.tb	ENSGT00940000155352.eb.a.b	ENSGT00390000015016.c	ENSGT00940000153272.a.b.c.j	ENSGT00940000157633	ENSGT00940000160121.c	ENSGT00940000166219.g.a	ENSGT00940000155323.a.h	ENSGT00940000155870.a.b	ENSGT00940000158267	ENSGT00940000157277.s	ENSGT00940000163898
Oncorhynchus	ANCESTRAL SPECIES	10	ENSGT00390000013995.b.b.k.a.c.a	ENSGT00390000016228.a.b.b	ENSGT00940000157529.i.a.f	ENSGT01010000222986.a	ENSGT00390000014700.b.a.a	ENSGT00940000159763.o	ENSGT00940000157816.a.a.a	ENSGT00940000158825.d.a	ENSGT00940000161128.f.b	ENSGT00940000157182.g.a.f	ENSGT00940000153561.b.a.a.b.y.a.a.b.a.a	ENSGT00940000164361.j	ENSGT00390000013899.b.a	ENSGT00940000161262.a.m.b #19	ENSGT00940000159073 #21	ENSGT00940000157089.A.a ##22	ENSGT00390000012935.b	ENSGT00940000161814.g.b.g.d.b.a	ENSGT00390000014757.w.a	ENSGT00940000154963.h	ENSGT00940000158980.tb	ENSGT00940000155352.eb.a.b	ENSGT00390000015016.c	ENSGT00940000153272.a.b.c.j	ENSGT00940000157633	ENSGT00940000160121.c	ENSGT00940000166219.g.a	ENSGT00940000155323.a.h	ENSGT00940000155870.a.b	ENSGT00940000158267	ENSGT00940000157277.s
Rainbow trout	MODERN SPECIES	11	ENSOMYG00000006457	ENSOMYG00000054271	CCND1 (ENSOMYG00000052324)	FGF4 (ENSOMYG00000068115)	FGF3 (ENSOMYG00000006256)	ENSOMYG00000004758	ENSOMYG00000049965	shank2b (ENSOMYG00000003266)	acte1 (ENSOMYG00000003165)	ENSOMYG00000003104	ENSOMYG00000071093	zgc:101566 (ENSOMYG00000060894)	chst1 (ENSOMYG00000003098) #19	ENSOMYG00000019767	cry2 (ENSOMYG00000003086) #21	mapk8ip1a (ENSOMYG00000003064) ##22	ENSOMYG00000067368	ckap5 (ENSOMYG00000002898)	ENSOMYG00000002521	ENSOMYG00000002443	ENSOMYG00000002426	ENSOMYG00000002405	ENSOMYG00000001251	ENSOMYG00000000103	ENSOMYG00000062596	KIF21A (ENSOMYG00000020006)	SLC2A13 (ENSOMYG00000023478)	lrrk2 (ENSOMYG00000023203)	SLC6A15 (ENSOMYG00000062138)	alx1 (ENSOMYG00000019786)	RASSF9 (ENSOMYG00000019785)
Oncorhynchus_a	ANCESTRAL SPECIES	5	ENSGT00950000183062.a.a.b.b.b.f	ENSGT00390000013995.b.b.k.a.c.a	ENSGT00390000016228.a.b.b	ENSGT00940000157529.i.a.f	ENSGT01010000222986.a	ENSGT00390000014700.b.a.a	ENSGT00940000157816.a.a.a	ENSGT00940000158825.d.a	ENSGT00940000161128.f.b	ENSGT00940000157182.g.a.f	ENSGT00940000153561.b.a.a.b.y.a.a.b.a.a	ENSGT00940000164361.j	ENSGT00390000013899.b.a	ENSGT00940000161262.a.m.b #19	ENSGT00940000159073 #21	ENSGT00940000157089.A.a ##22	ENSGT00390000012935.b	ENSGT00940000161814.g.b.g.d.b.a	ENSGT00390000014757.w.a	ENSGT00940000154963.h	ENSGT00940000158980.tb	ENSGT00940000155352.eb.a.b	ENSGT00390000015016.c	ENSGT00940000153272.a.b.c.j	ENSGT00940000157633	ENSGT00940000160121.c	ENSGT00940000166219.g.a	ENSGT00940000155323.a.h	ENSGT00940000155870.a.b	ENSGT00940000158267	ENSGT00940000157277.s
Coho salmon	MODERN SPECIES	14	PRICKLE1 (ENSOKIG00005011404)	ENSOKIG00005011399	ENSOKIG00005011389	ric8a (ENSOKIG00005011374)	ENSOKIG00005011368	CCND1 (ENSOKIG00005011363)	FGF4 (ENSOKIG00005011358)	FGF3 (ENSOKIG00005011347)	ANO1 (ENSOKIG00005008421)	ENSOKIG00005008235	shank2b (ENSOKIG00005006901)	acte1 (ENSOKIG00005006792)	zgc:101566 (ENSOKIG00005006780)	chst1 (ENSOKIG00005006766) #19	cry2 (ENSOKIG00005006611) #21	mapk8ip1a (ENSOKIG00005006549) ##22	cstpp1 (ENSOKIG00005006528)	ENSOKIG00005006521	ckap5 (ENSOKIG00005006293)	SLC6A5 (ENSOKIG00005006111)	aurkb (ENSOKIG00005050742)	MGAT4C (ENSOKIG00005050740)	borcs5 (ENSOKIG00005050738)	AKR1B1 (ENSOKIG00005050735)	ENSOKIG00005050697	CPA2 (ENSOKIG00005050684)	ENSOKIG00005050680	KIF21A (ENSOKIG00005050556)	slc2a13b (ENSOKIG00005050496)	lrrk2 (ENSOKIG00005050475)	SLC6A15 (ENSOKIG00005050441)
Chinook salmon	MODERN SPECIES	10	tmem179ba (ENSOTSG00005024045)	ENSOTSG00005024043	ric8a (ENSOTSG00005024041)	CCND1 (ENSOTSG00005024040)	FGF4 (ENSOTSG00005024038)	FGF3 (ENSOTSG00005024037)	ANO1 (ENSOTSG00005023871)	ENSOTSG00005023868	ENSOTSG00005023866	ENSOTSG00005023865	ENSOTSG00005023863	acte1 (ENSOTSG00005023862)	zgc:101566 (ENSOTSG00005023859)	chst1 (ENSOTSG00005023857) #19	cry2 (ENSOTSG00005023855) #21	mapk8ip1a (ENSOTSG00005023669) ##22	ENSOTSG00005023663	ckap5 (ENSOTSG00005023644)	SLC6A5 (ENSOTSG00005023510)	aurkb (ENSOTSG00005023508)	MGAT4C (ENSOTSG00005023507)	borcs5 (ENSOTSG00005023505)	akr1b1.2 (ENSOTSG00005023504)	ENSOTSG00005023310	cpa4 (ENSOTSG00005023222)	ENSOTSG00005023215	KIF21A (ENSOTSG00005023041)	slc2a13b (ENSOTSG00005023009)	lrrk2 (ENSOTSG00005021724)	SLC6A15 (ENSOTSG00005021707)	ENSOTSG00005021705
Salmo	ANCESTRAL SPECIES	45				ENSGT00950000182965.a.b.a.a.h	ENSGT01030000234518.B.a.b.a.b.d	ENSGT01030000234539.a.a.b.a.b.a.a.k.a.b	ENSGT00940000158440.g.a.e.a	ENSGT00940000157505	ENSGT00940000153499.b.b.d.a.a.c	ENSGT00940000158146.a.c.b	ENSGT00940000153499.b.b.d.a.a.d	ENSGT00940000158146.a.c.a.b	ENSGT00940000161262.a.n.e #19	ENSGT00390000013315 #20	ENSGT00940000159073 #21	ENSGT00940000157089.A.a ##22	ENSGT00940000161814.g.b.g.d.b.a	ENSGT00390000014757.w.a	ENSGT00940000154963.h	ENSGT00940000158980.tb	ENSGT00940000155352.eb.a.b	ENSGT00390000015016.c	ENSGT00940000157633	ENSGT00940000160121.c	ENSGT00940000166219.g.a	ENSGT00940000155323.a.h	ENSGT00940000155870.a.b	ENSGT00940000158267	ENSGT01100000263919.c	ENSGT00940000157277.s	ENSGT00940000163898
River trout	MODERN SPECIES	37	PRICKLE1 (ENSSTUG00000051076)	ENSSTUG00000051075	ric8a (ENSSTUG00000051074)	ENSSTUG00000051073	CCND1 (ENSSTUG00000051072)	FGF4 (ENSSTUG00000051071)	FGF3 (ENSSTUG00000051069)	ENSSTUG00000051068	ANO1 (ENSSTUG00000051016)	shank2b (ENSSTUG00000050981)	acte1 (ENSSTUG00000050974)	zgc:101566 (ENSSTUG00000050971)	ENSSTUG00000050970	chst1 (ENSSTUG00000050969) #19	cry2 (ENSSTUG00000050961) #21	mapk8ip1a (ENSSTUG00000050959) ##22	ENSSTUG00000050958	ENSSTUG00000050957	ckap5 (ENSSTUG00000050030)	SLC6A5 (ENSSTUG00000049921)	aurkb (ENSSTUG00000049917)	MGAT4C (ENSSTUG00000049915)	ENSSTUG00000049914	borcs5 (ENSSTUG00000049909)	ENSSTUG00000049905	ENSSTUG00000049779	CPA2 (ENSSTUG00000049701)	ENSSTUG00000049688	KIF21A (ENSSTUG00000049333)	slc2a13b (ENSSTUG00000049277)	lrrk2 (ENSSTUG00000049022)
Atlantic salmon	MODERN SPECIES	1	ENSSSAG00000075764	ric8a (ENSSSAG00000075692)	TPCN2 (ENSSSAG00000075685)	TPCN2 (ENSSSAG00000119661)	TPCN2 (ENSSSAG00000101120)	CCND1 (ENSSSAG00000087603)	FGF4 (ENSSSAG00000093671)	FGF3 (ENSSSAG00000075678)	ENSSSAG00000075598	ENSSSAG00000101276	shank2b (ENSSSAG00000075440)	acte1 (ENSSSAG00000075402)	zgc:101566 (ENSSSAG00000103913)	chst1 (ENSSSAG00000086094) #19	cry2 (ENSSSAG00000073888) #21	mapk8ip1a (ENSSSAG00000100515) ##22	ENSSSAG00000095041	ENSSSAG00000117557	ENSSSAG00000101114	ENSSSAG00000108207	ckap5 (ENSSSAG00000064318)	ENSSSAG00000064115	ENSSSAG00000115778	ENSSSAG00000064091	ENSSSAG00000052304	ENSSSAG00000051829	ENSSSAG00000108418	ENSSSAG00000051782	ENSSSAG00000107008	KIF21A (ENSSSAG00000007915)	slc2a13b (ENSSSAG00000105793)
Huchen	MODERN SPECIES	7342															cry2 (ENSHHUG00000019215) #21	mapk8ip1a (ENSHHUG00000019668) ##22
Salmoninae	ANCESTRAL SPECIES	543								ENSGT00940000157816.a.a.b	ENSGT00940000158825.d.b	ENSGT00940000161128.f.a	ENSGT00940000157182.g.a.e	ENSGT00940000153561.b.a.a.b.y.a.b	ENSGT00940000164361.i	ENSGT00390000013899.b.b	ENSGT00940000161262.a.m.a #19	ENSGT00940000157089.A.b ##22	ENSGT00390000012935	ENSGT00390000014757.w.b	ENSGT00940000158980.ub	ENSGT00390000015016.d	ENSGT00940000155352.fb	ENSGT00940000160121.d	ENSGT00940000166219.g.b	ENSGT00940000155323.a.g	ENSGT00940000157277.t
Salmoninae_a	ANCESTRAL SPECIES	83	ENSGT00950000183062.a.a.b.b.b.e	ENSGT00940000156242.c.a	ENSGT00390000013995.b.b.k.a.c.b	ENSGT00940000168203.a.b	ENSGT00390000016228.a.b.a	ENSGT00940000157529.i.a.e	ENSGT01010000222986.b	ENSGT00940000157816.a.a.b	ENSGT00940000158825.d.b	ENSGT00940000161128.f.a	ENSGT00940000157182.g.a.e	ENSGT00940000153561.b.a.a.b.y.a.b	ENSGT00940000164361.i	ENSGT00390000013899.b.b	ENSGT00940000161262.a.m.a #19	ENSGT00940000157089.A.b ##22	ENSGT00390000012935	ENSGT00390000014757.w.b	ENSGT00940000158980.ub	ENSGT00390000015016.d	ENSGT00940000155352.fb	ENSGT00940000160121.d	ENSGT00940000166219.g.b	ENSGT00940000155323.a.g	ENSGT00940000157277.t	ENSGT00940000158251.d.b	ENSGT00640000091574.e	ENSGT00940000155352.eb.b	ENSGT00940000154675.w.b.c	ENSGT00940000157538.f.d	ENSGT00390000018272.i.a
Salmo	ANCESTRAL SPECIES	65	ENSGT00940000155915.a.c	ENSGT00950000183062.a.a.b.b.b.e	ENSGT00940000156242.c.a	ENSGT00390000013995.b.b.k.a.c.b	ENSGT00940000168203.a.b	ENSGT00940000157529.i.a.e	ENSGT01010000222986.b	ENSGT00940000157816.a.a.b	ENSGT00940000158825.d.b	ENSGT00940000161128.f.a	ENSGT00940000157182.g.a.e	ENSGT00940000153561.b.a.a.b.y.a.b	ENSGT00940000164361.i	ENSGT00390000013899.b.b	ENSGT00940000161262.a.m.a #19	ENSGT00940000157089.A.b ##22	ENSGT00390000012935	ENSGT00390000014757.w.b	ENSGT00940000158980.ub	ENSGT00390000015016.d	ENSGT00940000155352.fb	ENSGT00940000160121.d	ENSGT00940000166219.g.b	ENSGT00940000155323.a.g	ENSGT00940000157277.t	ENSGT00940000158251.d.b	ENSGT00940000177577.a	ENSGT00940000155352.eb.b	ENSGT00940000154675.w.b.c	ENSGT00940000157538.f.d	ENSGT00390000018272.i.a
Atlantic salmon	MODERN SPECIES	7	PDZRN4 (ENSSSAG00000072923)	ENSSSAG00000072928	GXYLT1 (ENSSSAG00000103557)	ENSSSAG00000005997	YAF2 (ENSSSAG00000072939)	ENSSSAG00000006020	ccnd1 (ENSSSAG00000006058)	ENSSSAG00000006067	fgf3 (ENSSSAG00000006079)	ENSSSAG00000006181	shank2b (ENSSSAG00000006751)	acte1 (ENSSSAG00000008245)	zgc:101566 (ENSSSAG00000008253)	chst1 (ENSSSAG00000100456) #19	ENSSSAG00000109680	mapk8ip1a (ENSSSAG00000008260) ##22	cstpp1 (ENSSSAG00000008267)	ckap5 (ENSSSAG00000008344)	ENSSSAG00000064106	ENSSSAG00000098760	ENSSSAG00000008563	ENSSSAG00000008569	ENSSSAG00000008581	ENSSSAG00000008940	SLC6A15 (ENSSSAG00000041483)	alx1 (ENSSSAG00000042575)	ENSSSAG00000042649	ENSSSAG00000042667	NTS (ENSSSAG00000042679)	MGAT4C (ENSSSAG00000094108)	eif4g2b (ENSSSAG00000042704)
River trout	MODERN SPECIES	8	CNTN1 (ENSSTUG00000031778)	ENSSTUG00000031557	GXYLT1 (ENSSTUG00000031535)	YAF2 (ENSSTUG00000031524)	ENSSTUG00000031512	prickle1a (ENSSTUG00000031503)	ENSSTUG00000031490	CCND1 (ENSSTUG00000031480)	FGF4 (ENSSTUG00000031452)	FGF3 (ENSSTUG00000031430)	ANO1 (ENSSTUG00000028543)	shank2b (ENSSTUG00000027793)	acte1 (ENSSTUG00000027737)	zgc:101566 (ENSSTUG00000027727)	chst1 (ENSSTUG00000027719) #19	mapk8ip1a (ENSSTUG00000027678) ##22	cstpp1 (ENSSTUG00000027626)	ckap5 (ENSSTUG00000027275)	aurkb (ENSSTUG00000027210)	borcs5 (ENSSTUG00000027193)	MGAT4C (ENSSTUG00000027188)	ENSSTUG00000027177	ENSSTUG00000027005	ENSSTUG00000022647	ENSSTUG00000022377	alx1 (ENSSTUG00000022363)	ENSSTUG00000022355	MGAT4C (ENSSTUG00000022345)	ENSSTUG00000022339	eif4g2b (ENSSTUG00000021398)	ENSSTUG00000021355
Oncorhynchus	ANCESTRAL SPECIES	2	ENSGT00950000183062.a.a.b.b.b.e	ENSGT00940000156242.c.a	ENSGT00390000013995.b.b.k.a.c.b	ENSGT00940000168203.a.b	ENSGT00390000016228.a.b.a	ENSGT00940000157529.i.a.e	ENSGT01010000222986.b	ENSGT00940000157816.a.a.b	ENSGT00940000158825.d.b	ENSGT00940000161128.f.a	ENSGT00940000157182.g.a.e	ENSGT00940000153561.b.a.a.b.y.a.b	ENSGT00940000164361.i	ENSGT00390000013899.b.b	ENSGT00940000161262.a.m.a #19	ENSGT00940000157089.A.b ##22	ENSGT00390000012935.a	ENSGT00390000014757.w.b	ENSGT00940000158980.ub	ENSGT00390000015016.d	ENSGT00940000155352.fb	ENSGT00940000160121.d	ENSGT00940000166219.g.b	ENSGT00940000155323.a.g	ENSGT00940000157277.t	ENSGT00940000158251.d.b	ENSGT00640000091574.e	ENSGT00940000155352.eb.b	ENSGT00940000154675.w.b.c	ENSGT00940000157538.f.c.b	ENSGT00390000018272.i.a
Oncorhynchus_a	ANCESTRAL SPECIES	1	ENSGT00950000183062.a.a.b.b.b.e	ENSGT00940000156242.c.a	ENSGT00390000013995.b.b.k.a.c.b	ENSGT00940000168203.a.b	ENSGT00390000016228.a.b.a	ENSGT00940000157529.i.a.e	ENSGT01010000222986.b	ENSGT00940000157816.a.a.b	ENSGT00940000158825.d.b	ENSGT00940000161128.f.a	ENSGT00940000157182.g.a.e	ENSGT00940000153561.b.a.a.b.y.a.b	ENSGT00940000164361.i	ENSGT00390000013899.b.b	ENSGT00940000161262.a.m.a #19	ENSGT00940000157089.A.b ##22	ENSGT00390000012935.a	ENSGT00390000014757.w.b	ENSGT00940000158980.ub	ENSGT00390000015016.d	ENSGT00940000155352.fb	ENSGT00940000160121.d	ENSGT00940000166219.g.b	ENSGT00940000155323.a.g	ENSGT00940000157277.t	ENSGT00940000158251.d.b	ENSGT00640000091574.e	ENSGT00940000155352.eb.b	ENSGT00940000154675.w.b.c	ENSGT00940000157538.f.c.b	ENSGT00390000018272.i.a
Chinook salmon	MODERN SPECIES	30	PDZRN4 (ENSOTSG00005043630)	ENSOTSG00005043629	GXYLT1 (ENSOTSG00005043628)	YAF2 (ENSOTSG00005043627)	ENSOTSG00005043626	prickle1a (ENSOTSG00005043625)	ENSOTSG00005043624	CCND1 (ENSOTSG00005043621)	FGF4 (ENSOTSG00005043619)	FGF3 (ENSOTSG00005043618)	ANO1 (ENSOTSG00005039975)	shank2b (ENSOTSG00005039897)	acte1 (ENSOTSG00005039896)	zgc:101566 (ENSOTSG00005039895)	chst1 (ENSOTSG00005039894) #19	mapk8ip1a (ENSOTSG00005039893) ##22	cstpp1 (ENSOTSG00005039892)	ckap5 (ENSOTSG00005039737)	borcs5 (ENSOTSG00005039730)	aurkb (ENSOTSG00005039726)	MGAT4C (ENSOTSG00005039724)	ENSOTSG00005039721	ENSOTSG00005039718	ENSOTSG00005039711	ENSOTSG00005037454	SLC6A15 (ENSOTSG00005037409)	alx1 (ENSOTSG00005037407)	ENSOTSG00005037405	ENSOTSG00005037403	MGAT4C (ENSOTSG00005037401)	eif4g2b (ENSOTSG00005037361)
Coho salmon	MODERN SPECIES	24	CNTN1 (ENSOKIG00005025528)	PDZRN4 (ENSOKIG00005025425)	GXYLT1 (ENSOKIG00005025409)	YAF2 (ENSOKIG00005025382)	PPHLN1 (ENSOKIG00005025369)	prickle1a (ENSOKIG00005025356)	ENSOKIG00005025336	CCND1 (ENSOKIG00005025315)	FGF4 (ENSOKIG00005025287)	FGF3 (ENSOKIG00005025256)	ANO1 (ENSOKIG00005022403)	shank2b (ENSOKIG00005022198)	acte1 (ENSOKIG00005022160)	zgc:101566 (ENSOKIG00005022150)	chst1 (ENSOKIG00005022140) #19	mapk8ip1a (ENSOKIG00005022123) ##22	cstpp1 (ENSOKIG00005022089)	ckap5 (ENSOKIG00005021670)	AURKB (ENSOKIG00005021484)	BORCS5 (ENSOKIG00005021449)	ENSOKIG00005021432	MGAT4C (ENSOKIG00005021429)	ENSOKIG00005021399	ENSOKIG00005021363	ENSOKIG00005018544	SLC6A15 (ENSOKIG00005018163)	alx1 (ENSOKIG00005018144)	NTS (ENSOKIG00005018123)	MGAT4C (ENSOKIG00005018111)	eif4g2b (ENSOKIG00005017316)	TMTC3 (ENSOKIG00005017265)
Rainbow trout	MODERN SPECIES		PDZRN4 (ENSOMYG00000073658)	GXYLT1 (ENSOMYG00000028164)	YAF2 (ENSOMYG00000028116)	ENSOMYG00000028084	ENSOMYG00000028069	ENSOMYG00000028050	CCND1 (ENSOMYG00000028003)	FGF4 (ENSOMYG00000027980)	FGF3 (ENSOMYG00000027975)	ENSOMYG00000026454	ENSOMYG00000025903	zgc:101566 (ENSOMYG00000054832)	chst1 (ENSOMYG00000030524) #19	ENSOMYG00000050566	ENSOMYG00000076148	mapk8ip1a (ENSOMYG00000030487) ##22	ENSOMYG00000057618	cstpp1 (ENSOMYG00000030477)	ckap5 (ENSOMYG00000030222)	ENSOMYG00000029850	ENSOMYG00000029832	ENSOMYG00000077342	ENSOMYG00000029752	ENSOMYG00000029716	ENSOMYG00000024693	ENSOMYG00000049459	SLC6A15 (ENSOMYG00000023224)	ENSOMYG00000023183	ENSOMYG00000019783	MGAT4C (ENSOMYG00000023164)	ENSOMYG00000022959
Huchen	MODERN SPECIES	619																mapk8ip1a (ENSHHUG00000038369) ##22	cstpp1 (ENSHHUG00000038398)	ckap5 (ENSHHUG00000038402)	aurkb (ENSHHUG00000038513)	borcs5 (ENSHHUG00000038561)	MGAT4C (ENSHHUG00000038577)	ENSHHUG00000038595	ENSHHUG00000039073	ENSHHUG00000039132	ENSHHUG00000039559
Northern pike	MODERN SPECIES	18	ENSELUG00000009809	prickle1a (ENSELUG00000009843)	ENSELUG00000009865	ric8a (ENSELUG00000009893)	TPCN2 (ENSELUG00000009976)	CCND1 (ENSELUG00000010020)	FGF4 (ENSELUG00000029727)	FGF3 (ENSELUG00000010037)	ANO1 (ENSELUG00000010127)	shank2b (ENSELUG00000010259)	acte1 (ENSELUG00000010314)	guca1g (ENSELUG00000010338)	zgc:101566 (ENSELUG00000025978)	chst1 (ENSELUG00000010348) #19	cry2 (ENSELUG00000010362) #21	mapk8ip1a (ENSELUG00000010376) ##22	ENSELUG00000030689	ENSELUG00000027421	ENSELUG00000010502	ENSELUG00000010516	ENSELUG00000010555	LECA (ENSELUG00000010481)	ENSELUG00000010617	cstpp1 (ENSELUG00000010631)	ckap5 (ENSELUG00000010682)	aurkb (ENSELUG00000010719)	MGAT4C (ENSELUG00000011443)	ENSELUG00000027335	borcs5 (ENSELUG00000010758)	ENSELUG00000010778	cpa2 (ENSELUG00000010803)
Acanthomorphata	ANCESTRAL SPECIES	432															ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935
Euacanthomorphacea	ANCESTRAL SPECIES	30	ENSGT00390000018220	ENSGT00940000155273	ENSGT00940000175365	ENSGT00940000162251	ENSGT00390000009535	ENSGT00940000166187	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a	ENSGT00730000111190	ENSGT00940000170707	ENSGT00390000010938	ENSGT00390000010337.B.a.a	ENSGT00400000025006	ENSGT00940000153533.b	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000154876.a.b.a	ENSGT00940000154876.a.b.b	ENSGT00950000182983.B.b	ENSGT00940000166216	ENSGT00940000160936	ENSGT00940000155645.i.a	ENSGT00950000183211.a.a.b	ENSGT00980000202268	ENSGT00940000163363	ENSGT00390000009663	ENSGT00390000009899.a.d
Percomorphaceae	ANCESTRAL SPECIES	4	ENSGT00390000018220	ENSGT00940000155273	ENSGT00940000175365	ENSGT00940000162251	ENSGT00390000009535	ENSGT00940000166187	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a	ENSGT00730000111190	ENSGT00940000170707	ENSGT00390000010938	ENSGT00390000010337.B.a.a	ENSGT00400000025006	ENSGT00940000153533.b	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000154876.a.b.a	ENSGT00940000154876.a.b.b
Tiger tail seahorse	MODERN SPECIES	272	chka (ENSHCOG00000014969)	cetp (ENSHCOG00000014944)	herpud1 (ENSHCOG00000014936)	kiaa0513 (ENSHCOG00000014931)	ENSHCOG00000014906	zfpm1 (ENSHCOG00000014898)	trhr2 (ENSHCOG00000014868)	zc3h18 (ENSHCOG00000014856)	ENSHCOG00000014817	utp4 (ENSHCOG00000014802)	chtf8 (ENSHCOG00000014745)	has3 (ENSHCOG00000014730)	TANGO6 (ENSHCOG00000014682)	cry2 (ENSHCOG00000014642) #21	ENSHCOG00000014620	ENSHCOG00000014606 ##22	cstpp1 (ENSHCOG00000014591)	ckap5 (ENSHCOG00000014584)	DBX1 (ENSHCOG00000014526)	dnaaf4 (ENSHCOG00000014495)	anpepb.1 (ENSHCOG00000014391)	ANPEP (ENSHCOG00000014017)	ENSHCOG00000013381	ENSHCOG00000013372	ENSHCOG00000013343	mical2b (ENSHCOG00000013301)	parvaa (ENSHCOG00000013212)	parvaa (ENSHCOG00000013007)	tead1a (ENSHCOG00000012993)	RASSF10 (ENSHCOG00000000375)	OLFML1 (ENSHCOG00000012962)
Percomorphaceae_B	ANCESTRAL SPECIES	5	ENSGT00940000155273	ENSGT00940000175365	ENSGT00940000162251	ENSGT00390000009535	ENSGT00940000166187	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a	ENSGT00730000111190	ENSGT00940000170707	ENSGT00940000153533.b	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00500000045734	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000154876.a.b.a	ENSGT00940000154876.a.b.b	ENSGT00950000182940.b.a.a.g.a	ENSGT00950000182983.B.b	ENSGT00940000154146.b.b.b	ENSGT00940000166216	ENSGT00940000160936	ENSGT00940000155645.i.a	ENSGT00950000183211.a.a.b	ENSGT00980000202268	ENSGT00940000168375
Percomorphaceae_C	ANCESTRAL SPECIES	5	ENSGT00940000155273	ENSGT00940000175365	ENSGT00940000162251	ENSGT00390000009535	ENSGT00940000166187	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a	ENSGT00730000111190	ENSGT00940000170707	ENSGT00940000153533.b	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00500000045734	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000154876.a.b.a	ENSGT00940000154876.a.b.b	ENSGT00950000182940.b.a.a.g.a	ENSGT00950000182983.B.b	ENSGT00940000154146.b.b.b	ENSGT00940000166216	ENSGT00940000160936	ENSGT00940000155645.i.a	ENSGT00950000183211.a.a.b	ENSGT00980000202268	ENSGT00940000168375
Percomorphaceae_D	ANCESTRAL SPECIES	5	ENSGT00940000155273	ENSGT00940000175365	ENSGT00940000162251	ENSGT00390000009535	ENSGT00940000166187	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a	ENSGT00730000111190	ENSGT00940000170707	ENSGT00940000153533.b	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00500000045734	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000154876.a.b.a	ENSGT00940000154876.a.b.b	ENSGT00950000182940.b.a.a.g.a	ENSGT00950000182983.B.b	ENSGT00940000154146.b.b.b	ENSGT00940000166216	ENSGT00940000160936	ENSGT00940000155645.i.a	ENSGT00950000183211.a.a.b	ENSGT00980000202268	ENSGT00940000168375
Anabantaria	ANCESTRAL SPECIES	5	ENSGT00390000018220	ENSGT00940000155273	ENSGT00390000004877	ENSGT00940000162251	ENSGT00390000009535	ENSGT00940000166187	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a	ENSGT00730000111190	ENSGT00940000170707	ENSGT00940000153533.b	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000154876.a.b.a	ENSGT00940000154876.a.b.b	ENSGT00950000182940.b.a.a.g.a	ENSGT00950000182983.B.b	ENSGT00940000154146.b.b.b	ENSGT00940000166216	ENSGT00940000160936	ENSGT00940000155645.i.a	ENSGT00950000183211.a.a.b	ENSGT00980000202268	ENSGT00940000168375
Anabantoidei	ANCESTRAL SPECIES	5	ENSGT00390000018220	ENSGT00940000155273	ENSGT00390000004877	ENSGT00940000162251	ENSGT00390000009535	ENSGT00940000166187	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a	ENSGT00730000111190	ENSGT00940000170707	ENSGT00940000153533.b	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000154876.a.b.a	ENSGT00940000154876.a.b.b	ENSGT00950000182940.b.a.a.g.a	ENSGT00950000182983.B.b	ENSGT00940000154146.b.b.b	ENSGT00940000166216	ENSGT00940000160936	ENSGT00940000155645.i.a	ENSGT00950000183211.a.a.b	ENSGT00980000202268	ENSGT00940000168375
Climbing perch	MODERN SPECIES	19	ENSATEG00000005849	ENSATEG00000005791	ENSATEG00000005752	ENSATEG00000005732	kiaa0513 (ENSATEG00000005723)	ces3 (ENSATEG00000005709)	zfpm1 (ENSATEG00000005697)	ENSATEG00000005634	zc3h18 (ENSATEG00000005626)	ENSATEG00000005620	UTP4 (ENSATEG00000005607)	chtf8 (ENSATEG00000005576)	HAS3 (ENSATEG00000030007)	TANGO6 (ENSATEG00000005557)	cry2 (ENSATEG00000005498) #21	ENSATEG00000026055 ##22	cstpp1 (ENSATEG00000005484)	ckap5 (ENSATEG00000005337)	ENSATEG00000005277	ENSATEG00000005200	ENSATEG00000005107	ENSATEG00000004941	ENSATEG00000004830	ENSATEG00000004791	ENSATEG00000004743	ENSATEG00000026940	ENSATEG00000004732	ENSATEG00000004639	ENSATEG00000004568	ENSATEG00000027608	ENSATEG00000028198
Siamese fighting fish	MODERN SPECIES	17	ENSBSLG00000023746	foxl1 (ENSBSLG00000023744)	kiaa0513 (ENSBSLG00000023723)	ces3 (ENSBSLG00000023704)	zfpm1 (ENSBSLG00000023690)	trhr2 (ENSBSLG00000023680)	zc3h18 (ENSBSLG00000023654)	ENSBSLG00000023646	utp4 (ENSBSLG00000023600)	chtf8 (ENSBSLG00000023582)	ENSBSLG00000023580	ENSBSLG00000023490	has3 (ENSBSLG00000023443)	TANGO6 (ENSBSLG00000023438)	cry2 (ENSBSLG00000023115) #21	ENSBSLG00000023045 ##22	cstpp1 (ENSBSLG00000023025)	ckap5 (ENSBSLG00000022781)	DBX1 (ENSBSLG00000022777)	anpepb.1 (ENSBSLG00000022188)	ANPEP (ENSBSLG00000021988)	ENSBSLG00000021294	KLHL25 (ENSBSLG00000020293)	ENSBSLG00000020282	ENSBSLG00000020275	ska1 (ENSBSLG00000020271)	ENSBSLG00000020270	ENSBSLG00000020264	ENSBSLG00000020261	ENSBSLG00000020258	ENSBSLG00000020253
Zig-zag eel	MODERN SPECIES	20	ENSMAMG00000012289	ENSMAMG00000012242	ENSMAMG00000012231	ENSMAMG00000012214	kiaa0513 (ENSMAMG00000012203)	ces3 (ENSMAMG00000012187)	zfpm1 (ENSMAMG00000012173)	ENSMAMG00000012010	zc3h18 (ENSMAMG00000011979)	ENSMAMG00000011967	UTP4 (ENSMAMG00000011957)	chtf8 (ENSMAMG00000024260)	HAS3 (ENSMAMG00000011817)	TANGO6 (ENSMAMG00000011798)	cry2 (ENSMAMG00000011756) #21	ENSMAMG00000011713 ##22	cstpp1 (ENSMAMG00000011696)	ckap5 (ENSMAMG00000011652)	ENSMAMG00000011633	ENSMAMG00000011543	ENSMAMG00000011489	ENSMAMG00000011461	ENSMAMG00000011442	ENSMAMG00000011435	ENSMAMG00000011432	ripor1 (ENSMAMG00000011408)	ENSMAMG00000011357	carmil2 (ENSMAMG00000011349)	ENSMAMG00000011327	ENSMAMG00000011235	ENSMAMG00000024413
Carangaria	ANCESTRAL SPECIES	6	ENSGT00940000155273	ENSGT00940000175365	ENSGT00940000162251	ENSGT00390000009535	ENSGT00940000166187	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a	ENSGT00730000111190	ENSGT00940000170707	ENSGT00940000153533.b	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00500000045734	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000154876.a.b.a	ENSGT00940000154876.a.b.b	ENSGT00950000182940.b.a.a.g.a	ENSGT00950000182872.f.b.a.e	ENSGT00390000001622	ENSGT00940000159278	ENSGT00940000158705	ENSGT00510000048902.b	ENSGT00530000064251	ENSGT00940000164605	ENSGT00390000013269
Carangaria_A	ANCESTRAL SPECIES		ENSGT00940000155273	ENSGT00940000175365	ENSGT00940000162251	ENSGT00390000009535	ENSGT00940000166187	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a	ENSGT00730000111190	ENSGT00940000170707	ENSGT00940000153533.b	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00500000045734	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000154876.a.b.a	ENSGT00940000154876.a.b.b	ENSGT00950000182940.b.a.a.g.a	ENSGT00950000182872.f.b.a.e	ENSGT00390000001622	ENSGT00940000159278	ENSGT00940000158705	ENSGT00510000048902.b	ENSGT00530000064251	ENSGT00940000164605	ENSGT00390000013269
Barramundi perch	MODERN SPECIES	217	ENSLCAG00010020709	ENSLCAG00010020713	kiaa0513 (ENSLCAG00010020730)	ces3 (ENSLCAG00010020780)	zfpm1 (ENSLCAG00010020819)	trhr2 (ENSLCAG00010020822)	zc3h18 (ENSLCAG00010020827)	ENSLCAG00010020837	TANGO6 (ENSLCAG00010020843)	has3 (ENSLCAG00010020845)	chtf8 (ENSLCAG00010020847)	utp4 (ENSLCAG00010020852)	ENSLCAG00010020856	ENSLCAG00010020858	cry2 (ENSLCAG00010020865) #21	mapk8ip1a (ENSLCAG00010020873) ##22	cstpp1 (ENSLCAG00010020877)	ckap5 (ENSLCAG00010020938)	ENSLCAG00010021018	dnaaf4 (ENSLCAG00010021023)	anpepb.1 (ENSLCAG00010021158)	ANPEP (ENSLCAG00010021562)	ENSLCAG00010021630
Seriola	ANCESTRAL SPECIES	5	ENSGT00940000155273	ENSGT00940000175365	ENSGT00940000162251	ENSGT00390000009535	ENSGT00940000166187	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a	ENSGT00730000111190	ENSGT00940000170707	ENSGT00940000153533.b	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00500000045734	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000154876.a.b.a	ENSGT00950000182940.b.a.a.g.a	ENSGT00950000182872.f.b.a.e	ENSGT00390000001622	ENSGT00940000159278	ENSGT00940000158705	ENSGT00940000155323.a	ENSGT00940000166219	ENSGT00940000160121	ENSGT00940000157633	ENSGT00390000015016
Greater amberjack	MODERN SPECIES	86	foxl1 (ENSSDUG00000003405)	kiaa0513 (ENSSDUG00000003366)	ces3 (ENSSDUG00000003148)	zfpm1 (ENSSDUG00000003117)	trhr2 (ENSSDUG00000003096)	zc3h18 (ENSSDUG00000003040)	ENSSDUG00000003024	utp4 (ENSSDUG00000002976)	chtf8 (ENSSDUG00000002954)	has3 (ENSSDUG00000002947)	TANGO6 (ENSSDUG00000002911)	ENSSDUG00000002898	ENSSDUG00000002889	cry2 (ENSSDUG00000002859) #21	ENSSDUG00000002816	mapk8ip1a (ENSSDUG00000002787) ##22	cstpp1 (ENSSDUG00000002775)	ckap5 (ENSSDUG00000002666)	DBX1 (ENSSDUG00000002632)	dnaaf4 (ENSSDUG00000002619)	anpepb.1 (ENSSDUG00000002571)	ENSSDUG00000002531	ndrg4 (ENSSDUG00000002487)	ENSSDUG00000002463	gins3 (ENSSDUG00000002452)	znrf1 (ENSSDUG00000002424)	ldhd (ENSSDUG00000002387)	ENSSDUG00000002048	ENSSDUG00000001956	cpa4 (ENSSDUG00000001934)	ENSSDUG00000001891
Yellowtail amberjack	MODERN SPECIES	3283	GAN (ENSSLDG00000004896)	ENSSLDG00000004984	foxl1 (ENSSLDG00000005001)	kiaa0513 (ENSSLDG00000005035)	ces3 (ENSSLDG00000005094)	zfpm1 (ENSSLDG00000005129)	trhr2 (ENSSLDG00000005157)	zc3h18 (ENSSLDG00000005204)	ENSSLDG00000005237	utp4 (ENSSLDG00000005258)	chtf8 (ENSSLDG00000005276)	has3 (ENSSLDG00000005307)	TANGO6 (ENSSLDG00000005411)	ENSSLDG00000005476	cry2 (ENSSLDG00000005500) #21	ENSSLDG00000005566 ##22	cstpp1 (ENSSLDG00000005579)	ckap5 (ENSSLDG00000005619)	DBX1 (ENSSLDG00000005717)	dnaaf4 (ENSSLDG00000005741)	anpepb.1 (ENSSLDG00000005812)	ENSSLDG00000005924	ndrg4 (ENSSLDG00000005970)	gins3 (ENSSLDG00000006024)	znrf1 (ENSSLDG00000006056)	ldhd (ENSSLDG00000006088)	ENSSLDG00000006117	ENSSLDG00000006193	cpa4 (ENSSLDG00000006223)	ENSSLDG00000006302	borcs5 (ENSSLDG00000006677)
Pleuronectoidei	ANCESTRAL SPECIES		ENSGT00390000018220	ENSGT00940000175365	ENSGT00940000162251	ENSGT00390000009535	ENSGT00940000166187	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a	ENSGT00730000111190	ENSGT00940000170707	ENSGT00940000153533.b	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00500000045734	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000154876.a.b.a	ENSGT00940000154876.a.b.b	ENSGT00950000182940.b.a.a.g.a	ENSGT00950000182872.f.b.a.e	ENSGT00390000001622	ENSGT00940000159278	ENSGT00940000158705	ENSGT00510000048902.b	ENSGT00530000064251	ENSGT00940000164605	ENSGT00390000013269
Tongue sole	MODERN SPECIES	16	ENSCSEG00000021461	tbc1d15 (ENSCSEG00000021460)	tph2 (ENSCSEG00000021459)	ENSCSEG00000021458	lsm14aa (ENSCSEG00000021457)	gpia (ENSCSEG00000021456)	hsd17b2 (ENSCSEG00000021455)	mphosph6 (ENSCSEG00000021454)	slc12a3 (ENSCSEG00000021453)	ENSCSEG00000021452	ENSCSEG00000021451	ENSCSEG00000021450	arpin (ENSCSEG00000021449)	anpeplb (ENSCSEG00000021448)	cry2 (ENSCSEG00000021440) #21	mapk8ip1a (ENSCSEG00000021439) ##22	cstpp1 (ENSCSEG00000021438)	ckap5 (ENSCSEG00000021437)	ENSCSEG00000021436	alx1 (ENSCSEG00000021381)	ENSCSEG00000021379	zgc:101566 (ENSCSEG00000021378)	CHST1 (ENSCSEG00000021377) #19	dusp6 (ENSCSEG00000021376)	ENSCSEG00000021375	cep41 (ENSCSEG00000021372)	cpa1 (ENSCSEG00000021374)	tes (ENSCSEG00000021371)	cav2 (ENSCSEG00000021370)	cav1 (ENSCSEG00000021369)	met (ENSCSEG00000021367)
Turbot	MODERN SPECIES	1	ENSSMAG00000000265	ENSSMAG00000000259	ENSSMAG00000000254	kiaa0513 (ENSSMAG00000000230)	ces3 (ENSSMAG00000000226)	zfpm1 (ENSSMAG00000018113)	ENSSMAG00000018100	zc3h18 (ENSSMAG00000018052)	ENSSMAG00000025463	UTP4 (ENSSMAG00000018030)	chtf8 (ENSSMAG00000018002)	HAS3 (ENSSMAG00000017964)	TANGO6 (ENSSMAG00000017941)	ENSSMAG00000017933	cry2 (ENSSMAG00000017909) #21	mapk8ip1a (ENSSMAG00000017870) ##22	cstpp1 (ENSSMAG00000017861)	ckap5 (ENSSMAG00000017758)	ENSSMAG00000017726	ENSSMAG00000017710	ENSSMAG00000017635	ENSSMAG00000017587	ENSSMAG00000017489	gins3 (ENSSMAG00000017474)	ENSSMAG00000034482	ENSSMAG00000017408	ENSSMAG00000017660	arpin (ENSSMAG00000017368)	anpeplb (ENSSMAG00000017359)	si:dkey-12e7.1 (ENSSMAG00000017344)	chka (ENSSMAG00000017317)
Eupercaria	ANCESTRAL SPECIES	6	ENSGT00940000155273	ENSGT00940000175365	ENSGT00940000162251	ENSGT00390000009535	ENSGT00940000166187	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a	ENSGT00730000111190	ENSGT00940000170707	ENSGT00940000153533.b	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00500000045734	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000154876.a.b.a	ENSGT00940000154876.a.b.b	ENSGT00950000182940.b.a.a.g.a
Tetraodontidae	ANCESTRAL SPECIES	226															ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a
Fugu	DUPLICATION
Fugu	MODERN SPECIES	72	ENSTRUG00000027889	ENSTRUG00000029030	ENSTRUG00000026771	ENSTRUG00000032472	ENSTRUG00000032330	ENSTRUG00000027667	ENSTRUG00000032193	ENSTRUG00000031939	ckap5 (ENSTRUG00000015453)	cstpp1 (ENSTRUG00000032210)	mapk8ip1a (ENSTRUG00000033130) ##22	cry2 (ENSTRUG00000015322) #21	trhr2 (ENSTRUG00000032145)	ENSTRUG00000015318	cry2 (ENSTRUG00000027831) #21	ENSTRUG00000026659 ##22	cstpp1 (ENSTRUG00000015425)	DBX1 (ENSTRUG00000032605)	ENSTRUG00000026032	cbln1 (ENSTRUG00000029533)	ENSTRUG00000026063	siah1 (ENSTRUG00000003707)	lonp2 (ENSTRUG00000003832)	il34 (ENSTRUG00000022582)
Fugu	MODERN SPECIES	72			il34 (ENSTRUG00000022582)	lonp2 (ENSTRUG00000003832)	siah1 (ENSTRUG00000003707)	ENSTRUG00000026063	cbln1 (ENSTRUG00000029533)	ENSTRUG00000026032	DBX1 (ENSTRUG00000032605)	cstpp1 (ENSTRUG00000015425)	ENSTRUG00000026659 ##22	cry2 (ENSTRUG00000027831) #21	ENSTRUG00000015318	trhr2 (ENSTRUG00000032145)	cry2 (ENSTRUG00000015322) #21	mapk8ip1a (ENSTRUG00000033130) ##22	cstpp1 (ENSTRUG00000032210)	ckap5 (ENSTRUG00000015453)	ENSTRUG00000031939	ENSTRUG00000032193	ENSTRUG00000027667	ENSTRUG00000032330	ENSTRUG00000032472	ENSTRUG00000026771	ENSTRUG00000029030	ENSTRUG00000027889	ENSTRUG00000027149	ENSTRUG00000028607	ENSTRUG00000026291	ENSTRUG00000026135	ENSTRUG00000032637
Tetraodon	MODERN SPECIES	26	ENSTNIG00000004827	ENSTNIG00000004828	ENSTNIG00000004829	PTGR3 (ENSTNIG00000004830)	egr2b (ENSTNIG00000004831)	ENSTNIG00000004832	adoa (ENSTNIG00000004833)	egr2b (ENSTNIG00000004834)	foxg1a (ENSTNIG00000004841)	ehd4 (ENSTNIG00000004842)	coch (ENSTNIG00000004843)	ENSTNIG00000004848	trhr2 (ENSTNIG00000004849)	cry2 (ENSTNIG00000004850) #21	cry2 (ENSTNIG00000004851) #21	mapk8ip1a (ENSTNIG00000004852) ##22	cstpp1 (ENSTNIG00000004853)	ckap5 (ENSTNIG00000004854)	DBX1 (ENSTNIG00000004855)	ENSTNIG00000004856	sf3b3 (ENSTNIG00000004857)	ENSTNIG00000003800	ENSTNIG00000004858	smarca4a (ENSTNIG00000004859)	ENSTNIG00000004860	ENSTNIG00000005340	ENSTNIG00000003241	ENSTNIG00000004871	ENSTNIG00000004873	ENSTNIG00000004875	MAPK14 (ENSTNIG00000004876)
Eupecaria_A	ANCESTRAL SPECIES	7	ENSGT00940000155273	ENSGT00940000175365	ENSGT00940000162251	ENSGT00390000009535	ENSGT00940000166187	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a	ENSGT00730000111190	ENSGT00940000170707	ENSGT00940000153533.b	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00500000045734	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000154876.a.b.a	ENSGT00940000154876.a.b.b	ENSGT00950000182940.b.a.a.g.a	ENSGT00940000161262.b #19	ENSGT00390000013899.b	ENSGT00940000157182.g.a	ENSGT01100000263489.a.a.b.a.a.b.a.a.b	ENSGT00940000155391.a.a	ENSGT00390000005430	ENSGT00940000153717.b.g	ENSGT00940000156672.o.a
Ballan wrasse	MODERN SPECIES	392													ENSLBEG00000007474	ENSLBEG00000007517	ENSLBEG00000007731	ENSLBEG00000008112 ##22	cstpp1 (ENSLBEG00000008134)	ckap5 (ENSLBEG00000008181)	ENSLBEG00000008292	dnaaf4 (ENSLBEG00000008328)	anpepb.1 (ENSLBEG00000008347)	ANPEP (ENSLBEG00000008432)	ENSLBEG00000008494	CHST1 (ENSLBEG00000008571) #19	zgc:101566 (ENSLBEG00000008613)	ANO1 (ENSLBEG00000008646)	ENSLBEG00000008733	ENSLBEG00000008751	ENSLBEG00000008792	ENSLBEG00000008866
Eupecaria_B	ANCESTRAL SPECIES	7	ENSGT00390000018220	ENSGT00940000155273	ENSGT00940000175365	ENSGT00940000162251	ENSGT00390000009535	ENSGT00940000166187	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a	ENSGT00730000111190	ENSGT00940000170707	ENSGT00940000153533.b	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000154876.a.b.a	ENSGT00940000154876.a.b.b	ENSGT00950000182940.b.a.a.g.a	ENSGT00940000161262.b #19	ENSGT00390000013899.b	ENSGT00940000157182.g.a	ENSGT01100000263489.a.a.b.a.a.b.a.a.b	ENSGT00940000155391.a.a	ENSGT00390000005430	ENSGT00940000153717.b.g	ENSGT00940000156672.o.a
Eupecaria_C	ANCESTRAL SPECIES	29	ENSGT00940000155273	ENSGT00940000175365	ENSGT00940000162251	ENSGT00390000009535	ENSGT00940000166187.h	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a	ENSGT00730000111190	ENSGT00940000170707	ENSGT00940000153533.b	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00500000045734	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000154876.a.b.a	ENSGT00940000154876.a.b.b	ENSGT00950000182940.b.a.a.g.a	ENSGT00940000161262.b #19	ENSGT00390000013899.b	ENSGT00940000157182.g.a	ENSGT01100000263489.a.a.b.a.a.b.a.a.b	ENSGT00940000155391.a.a	ENSGT00390000005430	ENSGT00940000153717.b.g	ENSGT00940000156672.o.a
Gilthead seabream	MODERN SPECIES	22	ENSSAUG00010021769	ENSSAUG00010021767	ENSSAUG00010020697	ENSSAUG00010020658	ANO1 (ENSSAUG00010019940)	ENSSAUG00010019915	zgc:101566 (ENSSAUG00010019914)	ENSSAUG00010019913	CHST1 (ENSSAUG00010019912) #19	has3 (ENSSAUG00010019910)	ENSSAUG00010019908	ENSSAUG00010019906	KLHL25 (ENSSAUG00010019905)	ENSSAUG00010019898	cry2 (ENSSAUG00010019549) #21	ENSSAUG00010019536 ##22	cstpp1 (ENSSAUG00010019534)	ENSSAUG00010019533	ckap5 (ENSSAUG00010009295)	ENSSAUG00010009116	dnaaf4 (ENSSAUG00010009109)	anpepb.1 (ENSSAUG00010008624)	ENSSAUG00010008600	ENSSAUG00010008598	ENSSAUG00010008235	ANPEP (ENSSAUG00010007960)	ENSSAUG00010007957	plcg2 (ENSSAUG00010007587)	meak7 (ENSSAUG00010007555)	ENSSAUG00010007553	cotl1 (ENSSAUG00010007552)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	36	ENSGT00940000155273	ENSGT00940000175365	ENSGT00940000162251	ENSGT00390000009535	ENSGT00940000166187.h	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a	ENSGT00730000111190	ENSGT00940000170707	ENSGT00940000153533.b	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00500000045734	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000154876.a.b.a	ENSGT00940000154876.a.b.b	ENSGT00950000182940.b.a.a.g.a	ENSGT00940000161262.b #19	ENSGT00390000013899.b	ENSGT00940000157182.g.a	ENSGT01100000263489.a.a.b.a.a.b.a.a.b	ENSGT00940000155391.a.a	ENSGT00390000005430	ENSGT00940000153717.b.g	ENSGT00940000156672.o.a
Large yellow croaker	MODERN SPECIES	490	ENSLCRG00005001091	cdh6 (ENSLCRG00005001105)	ENSLCRG00005002115	zgc:56556 (ENSLCRG00005002120)	ENSLCRG00005002756	rnf2 (ENSLCRG00005002768)	ENSLCRG00005002790	AGL (ENSLCRG00005002849)	PEAK1 (ENSLCRG00005003718)	syt12 (ENSLCRG00005003721)	cat (ENSLCRG00005003727)	ENSLCRG00005003750	ENSLCRG00005003753	FBXO31 (ENSLCRG00005003766)	ENSLCRG00005004101	ENSLCRG00005004102 ##22	cstpp1 (ENSLCRG00005004106)	TMED6 (ENSLCRG00005004109)	ckap5 (ENSLCRG00005004119)	ENSLCRG00005004131	ENSLCRG00005004136	ENSLCRG00005004139	rftn2 (ENSLCRG00005004140)	PLCL1 (ENSLCRG00005004145)	satb2 (ENSLCRG00005004151)	dnajb11 (ENSLCRG00005004153)	tbccd1 (ENSLCRG00005004168)	crygs1 (ENSLCRG00005004171)	lcmt2 (ENSLCRG00005004178)	rab5b (ENSLCRG00005004186)	dbr1 (ENSLCRG00005004190)
European seabass	MODERN SPECIES	19	ENSDLAG00005019369	zfpm1 (ENSDLAG00005019395)	ENSDLAG00005034834	ENSDLAG00005005303	ENSDLAG00005019400	ENSDLAG00005019403	zc3h18 (ENSDLAG00005019413)	ENSDLAG00005019452	UTP4 (ENSDLAG00005019458)	HAS3 (ENSDLAG00005019483)	TANGO6 (ENSDLAG00005019502)	ENSDLAG00005034980	CHTF8 (ENSDLAG00005028361)	ENSDLAG00005029893	cry2 (ENSDLAG00005019570) #21	mapk8ip1a (ENSDLAG00005030637) ##22	cstpp1 (ENSDLAG00005019599)	ckap5 (ENSDLAG00005019622)	ENSDLAG00005001342	ENSDLAG00005033357	ENSDLAG00005026900	ENSDLAG00005032759	ENSDLAG00005001580	ENSDLAG00005005089	ENSDLAG00005005102	ENSDLAG00005004831	ENSDLAG00005031021	ENSDLAG00005005136 #19	ENSDLAG00005005139	ENSDLAG00005005243	ENSDLAG00005026515
Perciformes	ANCESTRAL SPECIES	28	ENSGT00390000018220	ENSGT00940000155273	ENSGT00940000175365	ENSGT00940000162251	ENSGT00390000009535	ENSGT00940000166187	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a	ENSGT00730000111190	ENSGT00940000170707	ENSGT00940000153533.b	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000154876.a.b.a	ENSGT00940000154876.a.b.b	ENSGT00950000182940.b.a.a.g.a
Cottioidei	ANCESTRAL SPECIES	32	ENSGT00390000009899.a.d	ENSGT00390000018220	ENSGT00940000155273	ENSGT00940000175365	ENSGT00940000162251	ENSGT00390000009535	ENSGT00940000166187	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a	ENSGT00730000111190	ENSGT00940000170707	ENSGT00940000153533.b	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000154876.a.b.a
Stickleback	MODERN SPECIES	14	B3GNT9 (ENSGACG00000013963)	phaf1 (ENSGACG00000013965)	cbfb (ENSGACG00000013972)	ENSGACG00000013979	gnao1a (ENSGACG00000013981)	hsf4 (ENSGACG00000013994)	ENSGACG00000013996	ENSGACG00000014016	ENSGACG00000014018	ENSGACG00000014022	zc3h18 (ENSGACG00000014025)	utp4 (ENSGACG00000014034)	chtf8 (ENSGACG00000014068)	has3 (ENSGACG00000014072)	TANGO6 (ENSGACG00000014081)	ENSGACG00000014090 ##22	cstpp1 (ENSGACG00000014093)	ckap5 (ENSGACG00000014098)	DBX1 (ENSGACG00000014112)	dnaaf4 (ENSGACG00000014118)	anpepb.1 (ENSGACG00000014140)
Lumpfish	MODERN SPECIES	21	ppp6r3 (ENSCLMG00005005924)	CMIP (ENSCLMG00005006136)	GAN (ENSCLMG00005006232)	ENSCLMG00005006242	foxl1 (ENSCLMG00005006244)	kiaa0513 (ENSCLMG00005006245)	ces3 (ENSCLMG00005006249)	zfpm1 (ENSCLMG00005006630)	trhr2 (ENSCLMG00005006632)	zc3h18 (ENSCLMG00005006641)	ENSCLMG00005006656	utp4 (ENSCLMG00005006659)	chtf8 (ENSCLMG00005006667)	has3 (ENSCLMG00005006668)	TANGO6 (ENSCLMG00005006670)	mapk8ip1a (ENSCLMG00005006678) ##22	cstpp1 (ENSCLMG00005006681)	ckap5 (ENSCLMG00005006695)	DBX1 (ENSCLMG00005006702)	ANPEP (ENSCLMG00005006711)	dnaaf4 (ENSCLMG00005007141)	mrps33 (ENSCLMG00005007142)	ENSCLMG00005007143	far1 (ENSCLMG00005007148)	ENSCLMG00005007163	ENSCLMG00005007164	ANO1 (ENSCLMG00005007165)	chka (ENSCLMG00005007173)	si:dkey-12e7.1 (ENSCLMG00005007281)	anpeplb (ENSCLMG00005007286)	arpin (ENSCLMG00005008096)
Perciformes_a	ANCESTRAL SPECIES	30	ENSGT00390000018220	ENSGT00940000155273	ENSGT00940000175365	ENSGT00940000162251	ENSGT00390000009535	ENSGT00940000166187	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a	ENSGT00730000111190	ENSGT00940000170707	ENSGT00940000153533.b	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000154876.a.b.a	ENSGT00940000154876.a.b.b	ENSGT00950000182940.b.a.a.g.a	ENSGT00390000000221.A.d	ENSGT00390000006367.d	ENSGT00940000157791	ENSGT00940000153962.a	ENSGT00940000159028	ENSGT00940000171216	ENSGT01050000244951.a.b.a.a.g.a	ENSGT00940000157523.g.b
Channel bull blenny	MODERN SPECIES	20	GAN (ENSCGOG00000003188)	ENSCGOG00000003175	foxl1 (ENSCGOG00000003172)	kiaa0513 (ENSCGOG00000003162)	ces3 (ENSCGOG00000003135)	zfpm1 (ENSCGOG00000003130)	trhr2 (ENSCGOG00000003126)	zc3h18 (ENSCGOG00000003113)	ENSCGOG00000003108	utp4 (ENSCGOG00000002730)	chtf8 (ENSCGOG00000002648)	has3 (ENSCGOG00000002619)	TANGO6 (ENSCGOG00000008127)	ENSCGOG00000008118	cry2 (ENSCGOG00000003563) #21	mapk8ip1a (ENSCGOG00000003471) ##22	cstpp1 (ENSCGOG00000003466)	ckap5 (ENSCGOG00000003087)	ENSCGOG00000003069	dnaaf4 (ENSCGOG00000003067)	ENSCGOG00000003066	anpepb.1 (ENSCGOG00000002919)	ANPEP (ENSCGOG00000002858)	ENSCGOG00000002821	ENSCGOG00000002817	ENSCGOG00000002808	cyb5r2 (ENSCGOG00000002784)	poglut3 (ENSCGOG00000002774)	sb:cb470 (ENSCGOG00000002763)	PPFIBP2 (ENSCGOG00000002388)	bmal1a (ENSCGOG00000002164)
Ovalentaria	ANCESTRAL SPECIES	7	ENSGT00390000004877	ENSGT00940000175365	ENSGT00940000162251	ENSGT00390000009535	ENSGT00940000166187	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a	ENSGT00730000111190	ENSGT00940000170707	ENSGT00940000153533.b	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00500000045734	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000154876.a.b.a	ENSGT00940000154876.a.b.b	ENSGT00950000182940.b.a.a.g.a	ENSGT00940000164795	ENSGT00390000018319.a.a.a.b.c	ENSGT00390000006548.a.b.b	ENSGT00940000157398.i.b	ENSGT00390000006218	ENSGT00390000002251	ENSGT00510000048252	ENSGT00940000164439
Atherinomorphae	ANCESTRAL SPECIES	44											ENSGT00940000153533.b	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000154876.a.b.a	ENSGT00940000154876.a.b.b	ENSGT00950000182940.b.a.a.g.a	ENSGT00940000164795	ENSGT00390000018319.a.a.a.b.c	ENSGT00390000006548.a.b.b	ENSGT00940000157398.i.b	ENSGT00390000006218	ENSGT00390000000062	ENSGT00940000158553.b.a	ENSGT00390000001810.a
Cyprinodontiformes	ANCESTRAL SPECIES	6	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535	ENSGT00940000162251	ENSGT00940000175365	ENSGT00390000004877	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000153533.b	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT01050000245029	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000154876.a.b.a	ENSGT00940000154876.a.b.b	ENSGT00950000182940.b.a.a.g.a	ENSGT00940000164795	ENSGT00390000018319.a.a.a.b.c	ENSGT00390000006548.a.b.b	ENSGT00940000157398.i.b	ENSGT00390000006218	ENSGT00390000000062	ENSGT00940000158553.b.a	ENSGT00390000001810.a
Cyprinodontoidei	ANCESTRAL SPECIES	47	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535	ENSGT00940000162251	ENSGT00940000153348.A	ENSGT00940000157335	ENSGT00940000156356	ENSGT00950000183151.a.a.b.b	ENSGT00940000168336	ENSGT00530000063553.b.b	ENSGT00940000154837	ENSGT01050000245029	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000154876.a.b.a	ENSGT00940000154876.a.b.b	ENSGT00950000182940.b.a.a.g.a	ENSGT00940000164795	ENSGT00390000018319.a.a.a.b.c	ENSGT00390000006548.a.b.b	ENSGT00940000157398.i.b	ENSGT00390000006218	ENSGT00390000000062	ENSGT00940000158553.b.a	ENSGT00390000001810.a
Poeciliinae	ANCESTRAL SPECIES	3	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535	ENSGT00940000162251	ENSGT00940000153348.A	ENSGT00940000157335	ENSGT00940000156356	ENSGT00950000183151.a.a.b.b	ENSGT00940000168336	ENSGT00530000063553.b.b	ENSGT00940000154837	ENSGT01050000245029	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000154876.a.b.a	ENSGT00940000154876.a.b.b	ENSGT00950000182940.b.a.a.g.a	ENSGT00940000164795	ENSGT00390000018319.a.a.a.b.c	ENSGT00390000006548.a.b.b	ENSGT00940000157398.i.b	ENSGT00390000006218	ENSGT00390000000062	ENSGT00940000158553.b.a	ENSGT00390000001810.a
Poecilia	ANCESTRAL SPECIES	39	ENSGT00940000170707	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187.o	ENSGT00390000009535	ENSGT00940000162251	ENSGT00940000153348.A	ENSGT00940000157335	ENSGT00940000156356	ENSGT00950000183151.a.a.b.b	ENSGT00940000168336	ENSGT00530000063553.b.b	ENSGT00940000154837	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000154876.a.b.a	ENSGT00940000154876.a.b.b	ENSGT00950000182940.b.a.a.g.a	ENSGT00940000164795	ENSGT00390000018319.a.a.a.b.c	ENSGT00390000006548.a.b.b	ENSGT00940000157398.i.b	ENSGT00390000006218	ENSGT00390000000062	ENSGT00940000158553.b.a	ENSGT00390000001810.a.b
NAME_6	ANCESTRAL SPECIES	29	ENSGT00940000170707	ENSGT00940000168053	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187.o	ENSGT00390000009535	ENSGT00940000162251	ENSGT00940000153348.A	ENSGT00940000157335	ENSGT00940000156356	ENSGT00950000183151.a.a.b.b	ENSGT00940000168336	ENSGT00530000063553.b.b	ENSGT00940000154837	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757.y	ENSGT00390000014757.z	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000154876.a.b.a	ENSGT00940000154876.a.b.b	ENSGT00950000182940.b.a.a.g.a	ENSGT00940000164795	ENSGT00390000018319.a.a.a.b.c	ENSGT00390000006548.a.b.b	ENSGT00940000157398.i.b	ENSGT00390000006218	ENSGT00390000000062	ENSGT00940000158553.b.a
Sailfin molly	MODERN SPECIES	2335															cry2 (ENSPLAG00000000056) #21	mapk8ip1a (ENSPLAG00000003588) ##22	cstpp1 (ENSPLAG00000003593)	ckap5 (ENSPLAG00000003626)
Amazon molly	MODERN SPECIES	459		zfpm1 (ENSPFOG00000016095)	zfpm1 (ENSPFOG00000022969)	ENSPFOG00000023224	ENSPFOG00000015926	kiaa0513 (ENSPFOG00000015879)	foxl1 (ENSPFOG00000023339)	exosc6 (ENSPFOG00000015869)	aars1 (ENSPFOG00000015763)	st3gal2 (ENSPFOG00000015679)	sf3b3 (ENSPFOG00000015516)	il34 (ENSPFOG00000015458)	lonp2 (ENSPFOG00000015295)	siah1 (ENSPFOG00000015278)	cry2 (ENSPFOG00000015153) #21	mapk8ip1a (ENSPFOG00000015129) ##22	cstpp1 (ENSPFOG00000015125)	ckap5 (ENSPFOG00000014769)	ENSPFOG00000022200	DBX1 (ENSPFOG00000014727)	dnaaf4 (ENSPFOG00000014680)	anpepb.1 (ENSPFOG00000014311)	ANPEP (ENSPFOG00000014266)	ENSPFOG00000014055	ENSPFOG00000014042	cart2 (ENSPFOG00000014040)	zgc:114188 (ENSPFOG00000014035)	sh3gl3b (ENSPFOG00000013975)	commd9 (ENSPFOG00000013964)	sycp3 (ENSPFOG00000013912)	lyrm5b (ENSPFOG00000013895)
Guppy	MODERN SPECIES	458	zc3h18 (ENSPREG00000019303)	trhr2 (ENSPREG00000019353)	zfpm1 (ENSPREG00000019479)	ENSPREG00000019492	ENSPREG00000019506	kiaa0513 (ENSPREG00000019529)	foxl1 (ENSPREG00000019542)	exosc6 (ENSPREG00000019548)	aars1 (ENSPREG00000019562)	st3gal2 (ENSPREG00000019603)	sf3b3 (ENSPREG00000019669)	il34 (ENSPREG00000019768)	lonp2 (ENSPREG00000019787)	siah1 (ENSPREG00000019816)	cry2 (ENSPREG00000019837) #21	mapk8ip1a (ENSPREG00000019855) ##22	cstpp1 (ENSPREG00000019884)	ckap5 (ENSPREG00000019911)	DBX1 (ENSPREG00000019962)	dnaaf4 (ENSPREG00000019982)	anpepb.1 (ENSPREG00000020040)	ANPEP (ENSPREG00000020078)	ENSPREG00000020142	ENSPREG00000020158	cart2 (ENSPREG00000020180)	zgc:114188 (ENSPREG00000020192)	sh3gl3b (ENSPREG00000020218)	commd9 (ENSPREG00000020230)	sycp3 (ENSPREG00000020246)	lyrm5b (ENSPREG00000020259)	nedd1 (ENSPREG00000020282)
Platyfish	MODERN SPECIES	11	trhr2 (ENSXMAG00000006255)	zfpm1 (ENSXMAG00000009855)	ces3 (ENSXMAG00000006261)	kiaa0513 (ENSXMAG00000006268)	foxl1 (ENSXMAG00000024110)	exosc6 (ENSXMAG00000006280)	aars1 (ENSXMAG00000006282)	st3gal2 (ENSXMAG00000006324)	sf3b3 (ENSXMAG00000006334)	il34 (ENSXMAG00000006373)	lonp2 (ENSXMAG00000006374)	ENSXMAG00000023005	siah1 (ENSXMAG00000023362)	ENSXMAG00000026648	cry2 (ENSXMAG00000006417) #21	mapk8ip1a (ENSXMAG00000006418) ##22	cstpp1 (ENSXMAG00000006426)	ckap5 (ENSXMAG00000006428)	DBX1 (ENSXMAG00000021940)	dnaaf4 (ENSXMAG00000006476)	anpepb.1 (ENSXMAG00000006489)	ANPEP (ENSXMAG00000006541)	ENSXMAG00000006549	ENSXMAG00000006586	cart2 (ENSXMAG00000021655)	zgc:114188 (ENSXMAG00000006593)	sh3gl3b (ENSXMAG00000006602)	commd9 (ENSXMAG00000006626)	sycp3 (ENSXMAG00000006646)	si:ch211-59o9.10 (ENSXMAG00000006670)	lyrm5b (ENSXMAG00000006672)
NAME_4	ANCESTRAL SPECIES	30	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535	ENSGT00940000162251	ENSGT00940000153348.A	ENSGT00940000157335	ENSGT00940000156356	ENSGT00950000183151.a.a.b.b	ENSGT00940000168336	ENSGT00530000063553.b.b	ENSGT00940000154837	ENSGT01050000245029	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000154876.a.b.a	ENSGT00940000154876.a.b.b	ENSGT00950000182940.b.a.a.g.a	ENSGT00940000164795	ENSGT00390000018319.a.a.a.b.c	ENSGT00390000006548.a.b.b	ENSGT00940000157398.i.b	ENSGT00390000006218	ENSGT00390000000062	ENSGT00990000204734	ENSGT00390000001810.a
Mummichog	MODERN SPECIES	2241						kiaa0513 (ENSFHEG00000000439)	foxl1 (ENSFHEG00000017483)	exosc6 (ENSFHEG00000017490)	st3gal2 (ENSFHEG00000017508)	sf3b3 (ENSFHEG00000017824)	il34 (ENSFHEG00000017863)	lonp2 (ENSFHEG00000017910)	siah1 (ENSFHEG00000017928)	ENSFHEG00000017932	cry2 (ENSFHEG00000017988) #21	mapk8ip1a (ENSFHEG00000018062) ##22	cstpp1 (ENSFHEG00000018079)	ckap5 (ENSFHEG00000018197)	DBX1 (ENSFHEG00000018231)	dnaaf4 (ENSFHEG00000018238)	anpepb.1 (ENSFHEG00000018249)	ANPEP (ENSFHEG00000018265)	ENSFHEG00000018321	zgc:193812 (ENSFHEG00000000472)	cart2 (ENSFHEG00000000474)	zgc:114188 (ENSFHEG00000018360)	sh3gl3b (ENSFHEG00000018367)	commd9 (ENSFHEG00000018398)	sycp3 (ENSFHEG00000018403)	ENSFHEG00000018424	lyrm5b (ENSFHEG00000018432)
Aplocheiloidei	ANCESTRAL SPECIES																	ENSGT00940000157089.A ##22
Turquoise killifish	MODERN SPECIES	1622	RPGRIP1L (ENSNFUG00015022052)	ENSNFUG00015022079	ENSNFUG00015022089	RBL2 (ENSNFUG00015022104)	ENSNFUG00015022154	ENSNFUG00015022160	actr6 (ENSNFUG00015022161)	KIAA0101 (ENSNFUG00015022169)	nedd1 (ENSNFUG00015022171)	Nfu_g_1_008559 (ENSNFUG00015022172)	RPS17 (ENSNFUG00015022174)	SH3GL3B (ENSNFUG00015022177)	commd9 (ENSNFUG00015022178)	SYCP3 (ENSNFUG00015022180)	OLA.7388 (ENSNFUG00015022186)	MAPK8IP1 (ENSNFUG00015022188) ##22	si:ch211-212o1.2 (ENSNFUG00015022193)	znf423 (ENSNFUG00015022199)	Nfu_g_1_008338 (ENSNFUG00015022244)	CNOT1 (ENSNFUG00015022269)	N4BP1 (ENSNFUG00015022326)	siah1 (ENSNFUG00015022333)	lonp2 (ENSNFUG00015022348)	il34 (ENSNFUG00015022360)	SF3B3 (ENSNFUG00015022368)	st3gal2 (ENSNFUG00015022391)	AARS (ENSNFUG00015022393)	EXOSC6 (ENSNFUG00015022404)	psme3ip1 (ENSNFUG00015022405)	ENSNFUG00015022406	zc3h18 (ENSNFUG00015022407)
Oryzias	ANCESTRAL SPECIES	35							ENSGT00940000162243	ENSGT00390000017113	ENSGT00940000153577.C	ENSGT00940000153533.b	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT01050000245073.B	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00940000164795	ENSGT00950000182940.b.a.a.g.a	ENSGT00940000154876.a.b.b	ENSGT00940000154876.a.b.a	ENSGT00390000004930	ENSGT00950000183093.B.a.a	ENSGT00390000014757	ENSGT00390000012935	ENSGT00390000018319.a.a.a.b.c	ENSGT00390000006548.a.b.b	ENSGT00390000006218	ENSGT00940000174623	ENSGT00390000001810.a	ENSGT00940000164439	ENSGT00510000048252
Oryzias_b	ANCESTRAL SPECIES		ENSGT00940000160931	ENSGT01010000222336.b.a.b.b	ENSGT00730000111146	ENSGT00940000157236.j	ENSGT00940000160682.b.c.a	ENSGT01030000234567.B.a.a.b.a.a.c.a	ENSGT00940000162243	ENSGT00390000017113	ENSGT00940000153577.C	ENSGT00940000153533.b	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT01050000245073.B	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00940000164795	ENSGT00950000182940.b.a.a.g.a	ENSGT00940000154876.a.b.b	ENSGT00940000154876.a.b.a	ENSGT00390000004930	ENSGT00950000183093.B.a.a	ENSGT00390000014757	ENSGT00390000012935	ENSGT00390000018319.a.a.a.b.c	ENSGT00390000006548.a.b.b	ENSGT00390000006218	ENSGT00940000174623	ENSGT00390000001810.a	ENSGT00940000164439	ENSGT00510000048252
Javanese ricefish	MODERN SPECIES	20	ENSOJAG00000016602	ftsj1 (ENSOJAG00000016593)	brd1b (ENSOJAG00000016578)	TAFA5 (ENSOJAG00000016560)	ENSOJAG00000016440	B3GNT9 (ENSOJAG00000016429)	ENSOJAG00000016421	setd6 (ENSOJAG00000016297)	utp4 (ENSOJAG00000016200)	chtf8 (ENSOJAG00000016188)	has3 (ENSOJAG00000016168)	TANGO6 (ENSOJAG00000016158)	ENSOJAG00000016088	ENSOJAG00000016056	cry2 (ENSOJAG00000015661) #21	ENSOJAG00000015596 ##22	zgc:193812 (ENSOJAG00000015588)	ENSOJAG00000015279	ANPEP (ENSOJAG00000014425)	anpepb.1 (ENSOJAG00000013970)	dnaaf4 (ENSOJAG00000013916)	DBX1 (ENSOJAG00000013901)	cstpp1 (ENSOJAG00000013533)	ENSOJAG00000013520	zgc:114188 (ENSOJAG00000013484)	commd9 (ENSOJAG00000013477)	ENSOJAG00000013468	ENSOJAG00000013461	lyrm5b (ENSOJAG00000013446)	nedd1 (ENSOJAG00000013428)	PCLAF (ENSOJAG00000013420)
Indian medaka	MODERN SPECIES	15	brd1b (ENSOMEG00000018434)	TAFA5 (ENSOMEG00000018352)	ENSOMEG00000018318	B3GNT9 (ENSOMEG00000018203)	bbs2 (ENSOMEG00000018176)	setd6 (ENSOMEG00000018132)	utp4 (ENSOMEG00000018096)	chtf8 (ENSOMEG00000018024)	has3 (ENSOMEG00000018007)	TANGO6 (ENSOMEG00000017973)	ENSOMEG00000017917	ENSOMEG00000000453	ENSOMEG00000000452	ENSOMEG00000017889	cry2 (ENSOMEG00000017875) #21	ENSOMEG00000017844 ##22	zgc:193812 (ENSOMEG00000017824)	ENSOMEG00000017801	ANPEP (ENSOMEG00000017738)	anpepb.1 (ENSOMEG00000017648)	dnaaf4 (ENSOMEG00000017571)	DBX1 (ENSOMEG00000017547)	ckap5 (ENSOMEG00000017514)	cstpp1 (ENSOMEG00000017441)	cart2 (ENSOMEG00000017414)	zgc:114188 (ENSOMEG00000017396)	commd9 (ENSOMEG00000017360)	ENSOMEG00000017340	ENSOMEG00000017317	lyrm5b (ENSOMEG00000017270)	nedd1 (ENSOMEG00000017252)
Oryzias_a	ANCESTRAL SPECIES	1	ENSGT00390000011417	ENSGT00940000156879	ENSGT01030000234613.a.b	ENSGT00390000008749.f	ENSGT00940000180061	ENSGT00940000162243	ENSGT00390000017113	ENSGT00940000153577.C	ENSGT00940000153533.b	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT01050000245073.B.f	ENSGT01050000245073.B.e	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00940000164795	ENSGT00950000182940.b.a.a.g.a	ENSGT00940000154876.a.b.b	ENSGT00940000154876.a.b.a	ENSGT00390000004930	ENSGT00950000183093.B.a.a	ENSGT00390000014757	ENSGT00390000012935	ENSGT00390000018319.a.a.a.b.c	ENSGT00390000006548.a.b.b	ENSGT00390000006218	ENSGT00940000158553.b.a	ENSGT00390000001810.a	ENSGT00940000164439.e	ENSGT00510000048252
Japanese Medaka HdrR	MODERN SPECIES	20	prmt7 (ENSORLG00000015041)	exoc3l1 (ENSORLG00000015005)	ENSORLG00000014963	ENSORLG00000029107	B3GNT9 (ENSORLG00000014959)	bbs2 (ENSORLG00000014949)	setd6 (ENSORLG00000014911)	utp4 (ENSORLG00000014893)	chtf8 (ENSORLG00000023926)	has3 (ENSORLG00000025653)	TANGO6 (ENSORLG00000014833)	ENSORLG00000023557	ENSORLG00000024305	ENSORLG00000014808	cry2 (ENSORLG00000014701) #21	ENSORLG00000029913 ##22	zgc:193812 (ENSORLG00000025284)	ENSORLG00000014644	ENSORLG00000014604	anpepb.1 (ENSORLG00000014593)	dnaaf4 (ENSORLG00000014547)	ENSORLG00000023774	ckap5 (ENSORLG00000014504)	cstpp1 (ENSORLG00000014436)	cart2 (ENSORLG00000014424)	zgc:114188 (ENSORLG00000026689)	commd9 (ENSORLG00000014404)	si:ch211-59o9.10 (ENSORLG00000014392)	lyrm5b (ENSORLG00000014387)	nedd1 (ENSORLG00000014380)	PCLAF (ENSORLG00000014346)
Chinese medaka	MODERN SPECIES	409															cry2 (ENSOSIG00000021038) #21	ENSOSIG00000021041 ##22	zgc:193812 (ENSOSIG00000021044)
Ovalentaria_B	ANCESTRAL SPECIES	3	ENSGT00940000155273	ENSGT00390000004877	ENSGT00940000162251	ENSGT00390000009535	ENSGT00940000166187	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a	ENSGT00730000111190	ENSGT00940000170707	ENSGT00940000153533.b	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00500000045734	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000154876.a.b.a	ENSGT00940000154876.a.b.b	ENSGT00950000182940.b.a.a.g.a	ENSGT00940000164795	ENSGT00390000018319.a.a.a.b.c	ENSGT00390000006548.a.b.b	ENSGT00940000157398.i.b	ENSGT00390000006218	ENSGT00390000002251	ENSGT00510000048252	ENSGT00940000164439
Pomacentridae	ANCESTRAL SPECIES	43	ENSGT00940000175365	ENSGT00940000162251	ENSGT00390000009535	ENSGT00940000166187	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a	ENSGT00730000111190	ENSGT00940000170707	ENSGT00940000153533.b.f	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938.h	ENSGT00500000045734	ENSGT00390000010938.g	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000154876.a.b.a	ENSGT00940000154876.a.b.b	ENSGT00950000182940.b.a.a.g.a	ENSGT00940000164795	ENSGT00390000018319.a.a.a.b.c	ENSGT00390000006548.a.b.b	ENSGT00940000157398.i.b	ENSGT00390000006218	ENSGT00390000002251	ENSGT00510000048252	ENSGT00940000164439
Bicolor damselfish	MODERN SPECIES	2406																mapk8ip1a (ENSSPAG00000003022) ##22	cstpp1 (ENSSPAG00000003078)	ckap5 (ENSSPAG00000003126)
Pomacentridae_A	ANCESTRAL SPECIES	56	ENSGT00940000155273	ENSGT00940000175365	ENSGT00940000162251	ENSGT00390000009535	ENSGT00940000166187	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a	ENSGT00730000111190	ENSGT00940000170707	ENSGT00940000153533.b.f	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938.h	ENSGT00500000045734	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000154876.a.b.a	ENSGT00940000154876.a.b.b	ENSGT00950000182940.b.a.a.g.a	ENSGT00940000164795	ENSGT00390000018319.a.a.a.b.c	ENSGT00390000006548.a.b.b	ENSGT00940000157398.i.b	ENSGT00390000006218	ENSGT00390000002251	ENSGT00510000048252	ENSGT00940000164439
Spiny chromis	MODERN SPECIES	1534																mapk8ip1a (ENSAPOG00000014776) ##22	cstpp1 (ENSAPOG00000014703)	ckap5 (ENSAPOG00000014588)	DBX1 (ENSAPOG00000014407)
Amphiprion	ANCESTRAL SPECIES	73	ENSGT00940000155273	ENSGT00940000175365	ENSGT00940000162251	ENSGT00390000009535	ENSGT00940000166187	ENSGT00530000063823.b.a	ENSGT01100000263484.B.a	ENSGT00730000111190	ENSGT00940000170707	ENSGT00940000153533.b.f.a	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938.h	ENSGT00500000045734	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000154876.a.b.a.f	ENSGT00940000154876.a.b.a.e	ENSGT00940000154876.a.b.b	ENSGT00950000182940.b.a.a.g.a	ENSGT00940000164795	ENSGT00390000018319.a.a.a.b.c	ENSGT00390000006548.a.b.b	ENSGT00940000157398.i.b	ENSGT00390000006218	ENSGT00390000002251	ENSGT00510000048252
Clown anemonefish	MODERN SPECIES	3244																ENSAOCG00000007400 ##22	cstpp1 (ENSAOCG00000007409)	ckap5 (ENSAOCG00000007522)	DBX1 (ENSAOCG00000007548)
Orange clownfish	MODERN SPECIES	18	ENSAPEG00000005862	foxl1 (ENSAPEG00000005843)	kiaa0513 (ENSAPEG00000005757)	ces3 (ENSAPEG00000005688)	zfpm1 (ENSAPEG00000005596)	trhr2 (ENSAPEG00000005509)	zc3h18 (ENSAPEG00000005491)	ENSAPEG00000005471	ENSAPEG00000005439	utp4 (ENSAPEG00000005422)	chtf8 (ENSAPEG00000005370)	has3 (ENSAPEG00000005332)	TANGO6 (ENSAPEG00000005303)	ENSAPEG00000005212	cry2 (ENSAPEG00000005191) #21	mapk8ip1a (ENSAPEG00000005130) ##22	cstpp1 (ENSAPEG00000005114)	ckap5 (ENSAPEG00000004975)	DBX1 (ENSAPEG00000004947)	dnaaf4 (ENSAPEG00000004883)	ANPEP (ENSAPEG00000004500)	utp4 (ENSAPEG00000004387)	chtf8 (ENSAPEG00000004366)	has3 (ENSAPEG00000004349)	ENSAPEG00000004321	ANPEP (ENSAPEG00000003824)	anpepb.1 (ENSAPEG00000003374)	ANPEP (ENSAPEG00000003127)	ENSAPEG00000003046	ENSAPEG00000003019	cart3 (ENSAPEG00000002995)
Cichlidae	ANCESTRAL SPECIES	101								ENSGT00730000111190	ENSGT00940000170707	ENSGT00940000153533.b	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00500000045734.a	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930
Midas cichlid	MODERN SPECIES	1007									ENSACIG00000021110	has3 (ENSACIG00000021101)	chtf8 (ENSACIG00000021091)	utp4 (ENSACIG00000021065)	ENSACIG00000021059	zc3h18 (ENSACIG00000021032)	cry2 (ENSACIG00000019970) #21	mapk8ip1a (ENSACIG00000019905) ##22	cstpp1 (ENSACIG00000019877)	ckap5 (ENSACIG00000019793)	ENSACIG00000019774	dnaaf4 (ENSACIG00000019744)	ENSACIG00000019568	HYAL4 (ENSACIG00000019548)	ENSACIG00000019538	ENSACIG00000019534
Pseudocrenilabrinae	ANCESTRAL SPECIES		ENSGT00390000006218	ENSGT00390000006548.a.b.b	ENSGT00390000018319.a.a.a.b.c	ENSGT00940000164795	ENSGT00950000182940.b.a.a.g.a	ENSGT00940000154876.a.b.b	ENSGT00940000154876.a.b.a	ENSGT00730000111190	ENSGT00940000170707	ENSGT00940000153533.b	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00500000045734.a	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000155529.A	ENSGT00390000013249	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00980000202268	ENSGT00940000168375	ENSGT00390000009663	ENSGT00940000156006	ENSGT00390000008457	ENSGT00940000154997	ENSGT00940000176948
Nile tilapia	MODERN SPECIES	19	commd9 (ENSONIG00000004136)	cart3 (ENSONIG00000035649)	zgc:193812 (ENSONIG00000004140)	ENSONIG00000004141	zgc:114188 (ENSONIG00000004138)	ANPEP (ENSONIG00000004148)	anpepb.1 (ENSONIG00000004164)	zc3h18 (ENSONIG00000004183)	ENSONIG00000004190	utp4 (ENSONIG00000004191)	chtf8 (ENSONIG00000041378)	has3 (ENSONIG00000004198)	TANGO6 (ENSONIG00000004199)	ENSONIG00000031153	cry2 (ENSONIG00000004200) #21	mapk8ip1a (ENSONIG00000032823) ##22	cstpp1 (ENSONIG00000012717)	ckap5 (ENSONIG00000012711)	ENSONIG00000012709	dnaaf4 (ENSONIG00000012701)	PTPRZ1 (ENSONIG00000012696)	aass (ENSONIG00000012690)	ENSONIG00000041129	fezf1 (ENSONIG00000012688)	CADPS2 (ENSONIG00000012680)	ENSONIG00000028287	ENSONIG00000031833	gal (ENSONIG00000036594)	ENSONIG00000035607	prpf4 (ENSONIG00000012671)	cdc26 (ENSONIG00000035435)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES		ENSGT00390000006548.a.b.b	ENSGT00390000018319.a.a.a.b.c	ENSGT00940000164795	ENSGT00950000182940.b.a.a.g.a	ENSGT00940000154876.a.b.b	ENSGT00940000154876.a.b.a	ENSGT00730000111190	ENSGT00940000170707	ENSGT00940000153533.b	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00500000045734.a	ENSGT00500000045734.b	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000155529.A	ENSGT00390000013249	ENSGT00940000159477	ENSGT00590000083094.a.b	ENSGT00940000168375	ENSGT00390000009663	ENSGT00940000156006	ENSGT00390000008457	ENSGT00940000154997	ENSGT00940000176948	ENSGT00510000050587
Lyretail cichlid	MODERN SPECIES	293	commd9 (ENSNBRG00000010620)	zgc:114188 (ENSNBRG00000010579)	cart3 (ENSNBRG00000010561)	zgc:193812 (ENSNBRG00000010542)	ENSNBRG00000010500	ANPEP (ENSNBRG00000010175)	anpepb.1 (ENSNBRG00000009985)	zc3h18 (ENSNBRG00000009931)	ENSNBRG00000009917	utp4 (ENSNBRG00000009785)	chtf8 (ENSNBRG00000009772)	has3 (ENSNBRG00000009763)	TANGO6 (ENSNBRG00000009725)	ENSNBRG00000009701	cry2 (ENSNBRG00000009295) #21	mapk8ip1a (ENSNBRG00000009184) ##22	cstpp1 (ENSNBRG00000009170)	ckap5 (ENSNBRG00000008845)	ENSNBRG00000008796	dnaaf4 (ENSNBRG00000008704)	ENSNBRG00000008621	ENSNBRG00000008280	aass (ENSNBRG00000008166)	fezf1 (ENSNBRG00000008132)	CADPS2 (ENSNBRG00000008054)	gal (ENSNBRG00000008017)	prpf4 (ENSNBRG00000007972)	CDC26 (ENSNBRG00000007963)	FER (ENSNBRG00000007924)	ENSNBRG00000007909	rnf224 (ENSNBRG00000007887)
Haplochromini	ANCESTRAL SPECIES		ENSGT00390000006548.a.b.b	ENSGT00390000018319.a.a.a.b.c	ENSGT00940000164795	ENSGT00950000182940.b.a.a.g.a	ENSGT00940000154876.a.b.b	ENSGT00940000154876.a.b.a	ENSGT00730000111190	ENSGT00940000170707	ENSGT00940000153533.b	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00500000045734.a	ENSGT00500000045734.b	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00940000176997.a.b.a	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000179688	ENSGT00940000155529.A	ENSGT00390000013249	ENSGT00940000159477	ENSGT00590000083094.a.b.w.a	ENSGT00940000168375	ENSGT00390000009663	ENSGT00940000156006	ENSGT00390000008457	ENSGT00940000154997
Burton s mouthbrooder	MODERN SPECIES	855																mapk8ip1a (ENSHBUG00000009572) ##22	cstpp1 (ENSHBUG00000009510)	ckap5 (ENSHBUG00000009417)	ENSHBUG00000009336	ENSHBUG00000009324	dnaaf4 (ENSHBUG00000009301)	ENSHBUG00000009292	ENSHBUG00000009277
Haplochromini_A	ANCESTRAL SPECIES	1	ENSGT00390000006548.a.b.b	ENSGT00390000018319.a.a.a.b.c	ENSGT00940000164795	ENSGT00950000182940.b.a.a.g.a	ENSGT00940000154876.a.b.b	ENSGT00940000154876.a.b.a	ENSGT00730000111190	ENSGT00940000170707.b	ENSGT00940000153533.b	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00500000045734.a	ENSGT00500000045734.b	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00940000176997.a.b.a	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000179688	ENSGT00940000155529.A	ENSGT00390000013249	ENSGT00940000159477	ENSGT00590000083094.a.b.w.a	ENSGT00940000168375	ENSGT00390000009663	ENSGT00940000156006	ENSGT00390000008457	ENSGT00940000154997
P. nyererei	MODERN SPECIES	573																mapk8ip1a (ENSPNYG00000007366) ##22	cstpp1 (ENSPNYG00000007423)	ckap5 (ENSPNYG00000007458)	ENSPNYG00000007603	ENSPNYG00000007622	dnaaf4 (ENSPNYG00000007658)	PTPRZ1 (ENSPNYG00000007774)	aass (ENSPNYG00000007847)	fezf1 (ENSPNYG00000007923)	CADPS2 (ENSPNYG00000007959)	gal (ENSPNYG00000007994)	prpf4 (ENSPNYG00000008013)	cdc26 (ENSPNYG00000008048)	FER (ENSPNYG00000008077)	ENSPNYG00000008133	rnf224 (ENSPNYG00000008143)
Haplochromini_B	ANCESTRAL SPECIES	20	ENSGT00390000006548.a.b.b	ENSGT00390000018319.a.a.a.b.c	ENSGT00940000164795	ENSGT00950000182940.b.a.a.g.a	ENSGT00940000154876.a.b.b	ENSGT00940000154876.a.b.a	ENSGT00730000111190	ENSGT00940000170707.b	ENSGT00940000153533.b	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00500000045734.a	ENSGT00500000045734.b	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00940000176997.a.b.a	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000179688	ENSGT00940000155529.A	ENSGT00390000013249	ENSGT00940000159477	ENSGT00590000083094.a.b.w.a	ENSGT00940000168375	ENSGT00390000009663	ENSGT00940000156006	ENSGT00390000008457	ENSGT00940000154997
Eastern happy	MODERN SPECIES	19	zgc:114188 (ENSACLG00000016484)	cart3 (ENSACLG00000016566)	zgc:193812 (ENSACLG00000016583)	ENSACLG00000016602	ANPEP (ENSACLG00000016717)	anpepb.1 (ENSACLG00000017196)	zc3h18 (ENSACLG00000017260)	ENSACLG00000017316	utp4 (ENSACLG00000017341)	chtf8 (ENSACLG00000017377)	has3 (ENSACLG00000017465)	TANGO6 (ENSACLG00000017485)	ENSACLG00000017569	ENSACLG00000017583	cry2 (ENSACLG00000017596) #21	ENSACLG00000017691 ##22	cstpp1 (ENSACLG00000017720)	ckap5 (ENSACLG00000017794)	ENSACLG00000018272	ENSACLG00000018289	dnaaf4 (ENSACLG00000018308)	ENSACLG00000018330	PTPRZ1 (ENSACLG00000018414)	aass (ENSACLG00000018557)	fezf1 (ENSACLG00000018670)	CADPS2 (ENSACLG00000018712)	ENSACLG00000018927	gal (ENSACLG00000018934)	prpf4 (ENSACLG00000019031)	FER (ENSACLG00000019077)	cdc26 (ENSACLG00000019203)
Zebra mbuna	MODERN SPECIES	1110	ENSMZEG00005022940	ENSMZEG00005022935	ENSMZEG00005022933	TCF7L1 (ENSMZEG00005022928)	ENSMZEG00005022924	ANPEP (ENSMZEG00005022910)	anpepb.1 (ENSMZEG00005022890)	zc3h18 (ENSMZEG00005022877)	ENSMZEG00005022873	utp4 (ENSMZEG00005022868)	chtf8 (ENSMZEG00005022863)	has3 (ENSMZEG00005022858)	TANGO6 (ENSMZEG00005022854)	ENSMZEG00005022852	cry2 (ENSMZEG00005022850) #21	ENSMZEG00005022847 ##22	cstpp1 (ENSMZEG00005022844)	ckap5 (ENSMZEG00005022836)	ENSMZEG00005022829	dnaaf4 (ENSMZEG00005022822)	ENSMZEG00005022812	aass (ENSMZEG00005022798)	zgc:193812 (ENSMZEG00005022794)	cart3 (ENSMZEG00005022793)	zgc:114188 (ENSMZEG00005022785)	commd9 (ENSMZEG00005022782)	CCND1 (ENSMZEG00005022773)	lrp5 (ENSMZEG00005022764)	ENSMZEG00005022762	ENSMZEG00005022761	ENSMZEG00005022760
Pinecone sodierfish	MODERN SPECIES	20	CMIP (ENSMMDG00005020168)	GAN (ENSMMDG00005020176)	ENSMMDG00005020207	foxl1 (ENSMMDG00005020210)	kiaa0513 (ENSMMDG00005020217)	ces3 (ENSMMDG00005020251)	zfpm1 (ENSMMDG00005020257)	trhr2 (ENSMMDG00005020258)	zc3h18 (ENSMMDG00005020262)	ENSMMDG00005020265	TANGO6 (ENSMMDG00005020271)	has3 (ENSMMDG00005020283)	chtf8 (ENSMMDG00005020288)	utp4 (ENSMMDG00005020297)	cry2 (ENSMMDG00005020327) #21	ENSMMDG00005020950 ##22	cstpp1 (ENSMMDG00005020952)	ckap5 (ENSMMDG00005020972)	DBX1 (ENSMMDG00005021117)	ENSMMDG00005021119	dnaaf4 (ENSMMDG00005021122)	anpepb.1 (ENSMMDG00005021130)	ANPEP (ENSMMDG00005021145)	zgc:162634 (ENSMMDG00005004024)	galnt18a (ENSMMDG00005004043)	ENSMMDG00005004417	ENSMMDG00005004435	ENSMMDG00005004458	far1 (ENSMMDG00005004477)	DKK3 (ENSMMDG00005004505)	plcg2 (ENSMMDG00005004521)
Cod	MODERN SPECIES	22	ENSGMOG00000019258	ENSGMOG00000031046	scamp2 (ENSGMOG00000019326)	ENSGMOG00000019331	plex9.2 (ENSGMOG00000019335)	ENSGMOG00000017080	ENSGMOG00000032835	ENSGMOG00000026830	lrp5 (ENSGMOG00000016796)	ppp6r3 (ENSGMOG00000016852)	gal (ENSGMOG00000018363)	ENSGMOG00000012797	shank2b (ENSGMOG00000025746)	zgc:101566 (ENSGMOG00000029067)	cry2 (ENSGMOG00000016049) #21	ENSGMOG00000025489 ##22	cstpp1 (ENSGMOG00000018002)	ENSGMOG00000018013	ENSGMOG00000036393	ENSGMOG00000036034	ENSGMOG00000018064	ENSGMOG00000018154	ENSGMOG00000022184	ENSGMOG00000016032	ENSGMOG00000026619	ENSGMOG00000016555	ENSGMOG00000007240	GLG1 (ENSGMOG00000013582)	ENSGMOG00000013609	MLKL (ENSGMOG00000013621)	ENSGMOG00000028529
Otomorpha	ANCESTRAL SPECIES	6	ENSGT00940000163723.A.f.b	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000164361	ENSGT00730000111007.a.b	ENSGT00940000165480.a	ENSGT00940000165480.b	ENSGT00390000013260.A.a	ENSGT00940000157530.b.a	ENSGT00940000157530.b.b	ENSGT00390000013315 #20	ENSGT00390000013899.b	ENSGT00940000161262.a #19	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00940000157089.B #22	ENSGT00940000158287	ENSGT00390000014757	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B.a.b	ENSGT00940000155663.f.b	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00390000007681.b.a.a	ENSGT00550000075025
Clupeiformes	ANCESTRAL SPECIES	795																ENSGT00940000157089.A ##22	ENSGT00390000012935
Atlantic herring	MODERN SPECIES	19	EEA1 (ENSCHAG00000021174)	nudt4a (ENSCHAG00000021142)	ube2na (ENSCHAG00000021110)	ENSCHAG00000021091	ENSCHAG00000020958	nr1h4 (ENSCHAG00000020615)	slc17a8 (ENSCHAG00000019917)	arntl2 (ENSCHAG00000019669)	si:ch211-245j22.3 (ENSCHAG00000019624)	ppfibp1b (ENSCHAG00000019042)	ENSCHAG00000018786	guca1g (ENSCHAG00000018634)	zgc:101566 (ENSCHAG00000018609)	chst1 (ENSCHAG00000018602) #19	cry2 (ENSCHAG00000018563) #21	mapk8ip1a (ENSCHAG00000018550) ##22	cstpp1 (ENSCHAG00000018484)	ckap5 (ENSCHAG00000018182)	exoc3l1 (ENSCHAG00000017955)	ENSCHAG00000017946	prmt7 (ENSCHAG00000016897)	ciapin1 (ENSCHAG00000016828)	coq9 (ENSCHAG00000016721)	polr2c (ENSCHAG00000016818)	wwp2 (ENSCHAG00000011365)	SYMPK (ENSCHAG00000010990)	MAF (ENSCHAG00000010958)	ENSCHAG00000010943	ENSCHAG00000010921	nfat5a (ENSCHAG00000010893)	ENSCHAG00000010883
Denticle herring	MODERN SPECIES	17	chst6 (ENSDCDG00000027927)	spire2 (ENSDCDG00000027926)	SNTB2 (ENSDCDG00000027925)	TPCN2 (ENSDCDG00000027921)	CCND1 (ENSDCDG00000027917)	ENSDCDG00000027916	FGF4 (ENSDCDG00000027912)	ANO1 (ENSDCDG00000025413)	shank2b (ENSDCDG00000024811)	ENSDCDG00000024526	ENSDCDG00000024446	zgc:101566 (ENSDCDG00000024435)	ENSDCDG00000024418	ENSDCDG00000024406	cry2 (ENSDCDG00000022971) #21	mapk8ip1a (ENSDCDG00000022928) ##22	cstpp1 (ENSDCDG00000022924)	ckap5 (ENSDCDG00000016629)	ENSDCDG00000016397	ENSDCDG00000016392	RUNDC1 (ENSDCDG00000016388)	ENSDCDG00000016385	eif3d (ENSDCDG00000015899)	ENSDCDG00000015896	ENSDCDG00000015893	rac2 (ENSDCDG00000015619)	ENSDCDG00000014111	ENSDCDG00000013963	grap2a (ENSDCDG00000032458)	ENSDCDG00000032441	ENSDCDG00000032436
Otophysi	ANCESTRAL SPECIES	19	ENSGT00940000156879	ENSGT00390000011417	ENSGT00390000009328	ENSGT00950000183100.A	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000164361	ENSGT00730000111007.a.b	ENSGT00940000165480.b	ENSGT00940000157530.b.a	ENSGT00940000157530.b.b	ENSGT00390000013899.b	ENSGT00940000161262.a #19	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00940000170257	ENSGT00940000160052	ENSGT00940000157499	ENSGT00390000004596	ENSGT00940000160309.e.a	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a.b.a.d	ENSGT00940000176901	ENSGT00390000002142	ENSGT00940000165986	ENSGT00940000165958	ENSGT00940000158705	ENSGT00940000159278	ENSGT00390000001622
Characiphysae	ANCESTRAL SPECIES	44	ENSGT01030000234613.a.b	ENSGT00940000156879	ENSGT00390000011417	ENSGT00390000009328	ENSGT00950000183100.A	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000164361.c	ENSGT00940000165480.b	ENSGT00940000157530.b.a	ENSGT00940000157530.b.b	ENSGT00390000013899.b	ENSGT00940000161262.a #19	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00940000170257	ENSGT00940000160052	ENSGT00940000157499	ENSGT00390000004596	ENSGT00940000160309.e.a	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a.b.a.d	ENSGT00940000176901	ENSGT00390000002142	ENSGT00940000165986	ENSGT00940000165958	ENSGT00940000158705	ENSGT00940000159278	ENSGT00390000001622
Channel catfish	MODERN SPECIES	27	dnajc24 (ENSIPUG00000010058)	ENSIPUG00000010039	MPPED2 (ENSIPUG00000009995)	NAV2 (ENSIPUG00000009687)	dbx1b (ENSIPUG00000009557)	exoc3l1 (ENSIPUG00000009486)	prmt7 (ENSIPUG00000009390)	ciapin1 (ENSIPUG00000009290)	coq9 (ENSIPUG00000009245)	polr2c (ENSIPUG00000009231)	shank2b (ENSIPUG00000009192)	acte1 (ENSIPUG00000009130)	zgc:101566 (ENSIPUG00000009110)	chst1 (ENSIPUG00000009099) #19	cry2 (ENSIPUG00000009030) #21	mapk8ip1a (ENSIPUG00000008988) ##22	cstpp1 (ENSIPUG00000008901)	ckap5 (ENSIPUG00000008806)	ENSIPUG00000008692	lcat (ENSIPUG00000008645)	pla2g15 (ENSIPUG00000008620)	usb1 (ENSIPUG00000008601)	ZNF319 (ENSIPUG00000008581)	ccdc113 (ENSIPUG00000008574)	csnk2a2 (ENSIPUG00000008440)	ENSIPUG00000008411	fa2h (ENSIPUG00000008385)	ano10b (ENSIPUG00000008336)	snrkb (ENSIPUG00000008282)	ldhd (ENSIPUG00000008187)	znrf1 (ENSIPUG00000008172)
Characiphysae_b	ANCESTRAL SPECIES	62	ENSGT01030000234613.a.b	ENSGT00940000156879	ENSGT00390000011417	ENSGT00390000009328	ENSGT00950000183100.A	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000164361.c	ENSGT00940000165480.b	ENSGT00940000157530.b.a	ENSGT00940000157530.b.b	ENSGT00390000013899.b	ENSGT00940000161262.a #19	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00390000004913	ENSGT00940000160052	ENSGT00940000157499	ENSGT00390000004596	ENSGT00940000160309.e.a	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a.b.a.d	ENSGT00940000176901	ENSGT00390000002142	ENSGT00940000165986	ENSGT00940000165958	ENSGT00940000158705	ENSGT00940000159278
Characoidei	ANCESTRAL SPECIES	161													ENSGT00390000013899.b	ENSGT00940000161262.a #19	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00390000004913	ENSGT00940000160052	ENSGT00940000157499	ENSGT00390000004596	ENSGT00940000160309.e.a	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a.b.a.d	ENSGT00940000176901	ENSGT00390000002142	ENSGT00940000165986	ENSGT00940000165958	ENSGT00940000158705	ENSGT00940000159278
Red-bellied piranha	MODERN SPECIES	58										ENSPNAG00000002060	acte1 (ENSPNAG00000011993)	guca1g (ENSPNAG00000011965)	zgc:101566 (ENSPNAG00000002027)	chst1 (ENSPNAG00000002020) #19	cry2 (ENSPNAG00000011942) #21	mapk8ip1a (ENSPNAG00000011910) ##22	cstpp1 (ENSPNAG00000011890)	ckap5 (ENSPNAG00000001967)	lcat (ENSPNAG00000001919)	pla2g15 (ENSPNAG00000006720)	usb1 (ENSPNAG00000011736)	ZNF319 (ENSPNAG00000006535)	ccdc113 (ENSPNAG00000011718)	ENSPNAG00000011706	ENSPNAG00000011659	ENSPNAG00000007176	znrf1 (ENSPNAG00000001843)	gins3 (ENSPNAG00000011643)	ndrg4 (ENSPNAG00000001838)	ENSPNAG00000001804	ENSPNAG00000001798
Mexicana tetra	MODERN SPECIES	16	NAV2 (ENSAMXG00000012935)	DBX1 (ENSAMXG00000039570)	exoc3l1 (ENSAMXG00000012894)	prmt7 (ENSAMXG00000012862)	ciapin1 (ENSAMXG00000012839)	coq9 (ENSAMXG00000012821)	polr2c (ENSAMXG00000012805)	shank2b (ENSAMXG00000012762)	acte1 (ENSAMXG00000001148)	guca1g (ENSAMXG00000033079)	zgc:101566 (ENSAMXG00000026280)	dnai7 (ENSAMXG00000032132)	chst1 (ENSAMXG00000026281) #19	ENSAMXG00000034998	cry2 (ENSAMXG00000038837) #21	mapk8ip1a (ENSAMXG00000009559) ##22	cstpp1 (ENSAMXG00000009548)	ckap5 (ENSAMXG00000009499)	DRC7 (ENSAMXG00000009471)	lcat (ENSAMXG00000037609)	pla2g15 (ENSAMXG00000029170)	usb1 (ENSAMXG00000040146)	ZNF319 (ENSAMXG00000024907)	ccdc113 (ENSAMXG00000009412)	ENSAMXG00000009396	ENSAMXG00000034167	ENSAMXG00000032442	ENSAMXG00000030632	fa2h (ENSAMXG00000034643)	ano10b (ENSAMXG00000009355)	snrkb (ENSAMXG00000009312)
Electric eel	MODERN SPECIES	276	ENSEEEG00000016362	ENSEEEG00000016364	ENSEEEG00000016366	mpped2 (ENSEEEG00000016370)	NAV2 (ENSEEEG00000016373)	dbx1b (ENSEEEG00000016396)	exoc3l1 (ENSEEEG00000016403)	prmt7 (ENSEEEG00000016406)	ciapin1 (ENSEEEG00000016409)	coq9 (ENSEEEG00000016411)	polr2c (ENSEEEG00000016412)	shank2b (ENSEEEG00000016413)	zgc:101566 (ENSEEEG00000016431)	chst1 (ENSEEEG00000016432) #19	cry2 (ENSEEEG00000016433) #21	mapk8ip1a (ENSEEEG00000016479) ##22	cstpp1 (ENSEEEG00000016480)	ckap5 (ENSEEEG00000016496)	DRC7 (ENSEEEG00000016500)	lcat (ENSEEEG00000016521)	pla2g15 (ENSEEEG00000016534)	usb1 (ENSEEEG00000016535)	ZNF319 (ENSEEEG00000016543)	ccdc113 (ENSEEEG00000016544)	ENSEEEG00000016550	fa2h (ENSEEEG00000016613)	ano10b (ENSEEEG00000016616)
Cyprinoidei	ANCESTRAL SPECIES	42			ENSGT01030000234613.a.b	ENSGT00940000156879	ENSGT00390000011417	ENSGT00390000009328	ENSGT00950000183100.A	ENSGT00940000159982	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00940000164361	ENSGT00940000165480.b	ENSGT00390000013899.b	ENSGT00940000161262.a #19	ENSGT00940000159073 #21	ENSGT00940000157089.A ##22	ENSGT00390000012935	ENSGT00390000014757	ENSGT00390000004913	ENSGT00940000160052	ENSGT00940000157499	ENSGT00390000004596	ENSGT00940000160309.e.a	ENSGT00940000154521.B	ENSGT00390000004215.a.b.b.c.a.b.a.d	ENSGT00940000176901	ENSGT00390000002142	ENSGT00940000165986	ENSGT00940000165958	ENSGT00940000158705	ENSGT00940000159278
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	213	ENSGT00390000005430.o	ENSGT00390000007681.b.a.a.n.a	ENSGT00940000155663.f.a.a	ENSGT00950000183093.B.b.a	ENSGT01030000234613.a.b.f	ENSGT00940000156879.i.a.a	ENSGT00390000011417.a	ENSGT00390000009328.e	ENSGT00950000183100.A.h	ENSGT00940000153561.b.a.a.b.t.b.a.a	ENSGT00940000164361.g.a	ENSGT00940000165480.b.a	ENSGT00390000013899.b.f	ENSGT00940000161262.a.b #19	ENSGT00940000159073.c #21	ENSGT00940000157089.A.e ##22	ENSGT00390000012935.e	ENSGT00390000014757.j	ENSGT00390000004913	ENSGT00940000160052	ENSGT00940000157499.a	ENSGT00390000004596.b	ENSGT00940000160309.e.a.a	ENSGT00940000154521.B.b	ENSGT00390000004215.a.b.b.c.a.b.a.d.b	ENSGT00390000002142.j	ENSGT00940000176901	ENSGT00390000002142.i.b	ENSGT00940000165986.g	ENSGT00940000165958.l	ENSGT00940000158705.f
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	3519																mapk8ip1a (ENSCARG00000053215) ##22	cstpp1 (ENSCARG00000053163)
Goldfish	MODERN SPECIES	17	ENSCARG00000034603	ENSCARG00000034608	ENSCARG00000034615	ENSCARG00000034620	guca1g (ENSCARG00000034633)	acte1 (ENSCARG00000034644)	shank2b (ENSCARG00000034696)	polr2c (ENSCARG00000034857)	coq9 (ENSCARG00000034830)	ciapin1 (ENSCARG00000034872)	prmt7 (ENSCARG00000034959)	exoc3l1 (ENSCARG00000035960)	ENSCARG00000035996	dbx1b (ENSCARG00000036004)	cry2 (ENSCARG00000036045) #21	mapk8ip1a (ENSCARG00000036172) ##22	cstpp1 (ENSCARG00000036194)	ckap5 (ENSCARG00000036299)	DRC7 (ENSCARG00000037123)	lcat (ENSCARG00000037152)	pla2g15 (ENSCARG00000037191)	ZNF319 (ENSCARG00000037208)	ccdc113 (ENSCARG00000037220)	ENSCARG00000037278	ENSCARG00000038092	galnt18a (ENSCARG00000038103)	PYURF (ENSCARG00000038221)	PIGY (ENSCARG00000038236)	ENSCARG00000038246	btbd10a (ENSCARG00000038263)	bmal1a (ENSCARG00000038428)
Cyprininae_a	ANCESTRAL SPECIES	234	ENSGT00390000007681.b.a.a.n.a	ENSGT00940000155663.f.a.a	ENSGT00950000183093.B.b.a	ENSGT01030000234613.a.b.f	ENSGT00940000156879.i.b	ENSGT00390000011417.a	ENSGT00390000009328.e	ENSGT00950000183100.A.h	ENSGT00940000153561.b.a.a.b.t.b.a.a	ENSGT00940000153561.b.a.a.b.t.b.b	ENSGT00940000164361.g.a	ENSGT00940000165480.b.a	ENSGT00390000013899.b.f	ENSGT00940000161262.a.b #19	ENSGT00940000159073.c #21	ENSGT00940000157089.A.e ##22	ENSGT00390000012935.e	ENSGT00390000014757.j	ENSGT00390000004913	ENSGT00940000160052	ENSGT00940000157499.a	ENSGT00390000004596.b	ENSGT00940000154521.B.b	ENSGT00390000004215.a.b.b.c.a.b.a.d.b	ENSGT00940000176901	ENSGT00390000002142.i.b	ENSGT00940000165986.g	ENSGT00940000165958.l	ENSGT00940000158705.f	ENSGT00940000159278.b.b	ENSGT00390000001622.e
Golden-line barbel	MODERN SPECIES	29	dnajc24 (ENSSGRG00000032441)	mpped2 (ENSSGRG00000032437)	NAV2 (ENSSGRG00000032414)	dbx1b (ENSSGRG00000032412)	exoc3l1 (ENSSGRG00000032411)	prmt7 (ENSSGRG00000032396)	ciapin1 (ENSSGRG00000032367)	coq9 (ENSSGRG00000032330)	polr2c (ENSSGRG00000032329)	shank2b (ENSSGRG00000032305)	acte1 (ENSSGRG00000030299)	guca1g (ENSSGRG00000030262)	zgc:101566 (ENSSGRG00000030260)	chst1 (ENSSGRG00000030259) #19	cry2 (ENSSGRG00000030166) #21	mapk8ip1a (ENSSGRG00000030165) ##22	cstpp1 (ENSSGRG00000030163)	ckap5 (ENSSGRG00000026998)	ENSSGRG00000026916	lcat (ENSSGRG00000026914)	pla2g15 (ENSSGRG00000026911)	usb1 (ENSSGRG00000026909)	ZNF319 (ENSSGRG00000026905)	ccdc113 (ENSSGRG00000026904)	ENSSGRG00000026379	fa2h (ENSSGRG00000026348)	ano10b (ENSSGRG00000026342)	snrkb (ENSSGRG00000026341)	ldhd (ENSSGRG00000026050)	znrf1 (ENSSGRG00000026035)	gins3 (ENSSGRG00000026032)
Common carp reference	MODERN SPECIES	37	ENSCCRG00000064442	ENSCCRG00000030728	dbx1b (ENSCCRG00000030714)	exoc3l1 (ENSCCRG00000006561)	prmt7 (ENSCCRG00000006642)	ciapin1 (ENSCCRG00000009324)	coq9 (ENSCCRG00000062261)	polr2c (ENSCCRG00000009384)	shank2b (ENSCCRG00000009423)	acte1 (ENSCCRG00000032675)	guca1g (ENSCCRG00000032639)	zgc:101566 (ENSCCRG00000081489)	chst1 (ENSCCRG00000074409) #19	chst1 (ENSCCRG00000064541) #19	cry2 (ENSCCRG00000026974) #21	mapk8ip1a (ENSCCRG00000004506) ##22	cstpp1 (ENSCCRG00000004522)	ckap5 (ENSCCRG00000026902)	ENSCCRG00000006510	lcat (ENSCCRG00000006518)	pla2g15 (ENSCCRG00000060725)	ENSCCRG00000057764	ENSCCRG00000004969	ccdc113 (ENSCCRG00000006523)	ENSCCRG00000066187	fa2h (ENSCCRG00000027990)	ano10b (ENSCCRG00000039529)	snrkb (ENSCCRG00000057293)	ENSCCRG00000079461	ldhd (ENSCCRG00000039481)	znrf1 (ENSCCRG00000055469)
Cyprininae	ANCESTRAL SPECIES	145			ENSGT00940000155663.f.a.b	ENSGT00950000183093.B.b.b	ENSGT01030000234613.a.b.e	ENSGT00940000156879.j	ENSGT00390000011417.b	ENSGT00390000009328.f	ENSGT00950000183100.A.g	ENSGT00940000153561.b.a.a.b.t.a	ENSGT00940000164361.g.b	ENSGT00940000165480.b.b	ENSGT00390000013899.b.e	ENSGT00940000161262.a.a #19	ENSGT00940000159073.d #21	ENSGT00940000157089.A.f ##22	ENSGT00390000012935.f	ENSGT00390000014757.i	ENSGT00940000157499.b	ENSGT00390000004596.a	ENSGT00940000160309.e.a.b	ENSGT00940000154521.B.a	ENSGT00390000004215.a.b.b.c.a.b.a.d.a	ENSGT00390000002142.i.a	ENSGT00940000165986.h	ENSGT00940000165958.k	ENSGT00940000158705.e	ENSGT00940000159278.b.a	ENSGT00390000001622.f	ENSGT00950000182872.f.b.a.d	ENSGT00940000165415.g.a.a
Cyprininae_a	ANCESTRAL SPECIES	73	ENSGT00390000005430.p	ENSGT00390000007681.b.a.a.n.b	ENSGT00940000155663.f.a.b	ENSGT00950000183093.B.b.b	ENSGT01030000234613.a.b.e	ENSGT00940000156879.j	ENSGT00390000011417.b	ENSGT00390000009328.f	ENSGT00950000183100.A.g	ENSGT00940000153561.b.a.a.b.t.a	ENSGT00940000164361.g.b	ENSGT00940000165480.b.b	ENSGT00390000013899.b.e	ENSGT00940000161262.a.a #19	ENSGT00940000159073.d #21	ENSGT00940000157089.A.f ##22	ENSGT00390000012935.f	ENSGT00390000014757.i	ENSGT00940000157499.b	ENSGT00390000004596.a	ENSGT00940000160309.e.a.a	ENSGT00940000160309.e.a.b	ENSGT00940000154521.B.a	ENSGT00390000004215.a.b.b.c.a.b.a.d.a	ENSGT00390000002142.i.a	ENSGT00940000165986.h	ENSGT00940000165958.k	ENSGT00940000158705.e	ENSGT00940000159278.a	ENSGT00940000159278.b.a	ENSGT00390000001622.f
Common carp reference	MODERN SPECIES	33	mpped2 (ENSCCRG00000070175)	ENSCCRG00000038850	dbx1b (ENSCCRG00000061310)	exoc3l1 (ENSCCRG00000066343)	prmt7 (ENSCCRG00000030960)	ciapin1 (ENSCCRG00000031179)	coq9 (ENSCCRG00000009358)	polr2c (ENSCCRG00000079644)	shank2b (ENSCCRG00000038807)	acte1 (ENSCCRG00000037131)	guca1g (ENSCCRG00000082055)	zgc:101566 (ENSCCRG00000068295)	chst1 (ENSCCRG00000066553) #19	chst1 (ENSCCRG00000068173) #19	cry2 (ENSCCRG00000053943) #21	mapk8ip1a (ENSCCRG00000059002) ##22	cstpp1 (ENSCCRG00000065135)	ckap5 (ENSCCRG00000004630)	pla2g15 (ENSCCRG00000039535)	usb1 (ENSCCRG00000004940)	ENSCCRG00000069166	ccdc113 (ENSCCRG00000004950)	ENSCCRG00000081430	fa2h (ENSCCRG00000039531)	ano10b (ENSCCRG00000037557)	snrkb (ENSCCRG00000039525)	ldhd (ENSCCRG00000039519)	ENSCCRG00000075321	gins3 (ENSCCRG00000061752)	ndrg4 (ENSCCRG00000036883)	ENSCCRG00000058845
Golden-line barbel	MODERN SPECIES	112	tcp11l1 (ENSSGRG00000038564)	wt1a (ENSSGRG00000038568)	pax6a (ENSSGRG00000038637)	dnajc24 (ENSSGRG00000038834)	mpped2 (ENSSGRG00000038836)	NAV2 (ENSSGRG00000038951)	dbx1b (ENSSGRG00000040290)	exoc3l1 (ENSSGRG00000040291)	prmt7 (ENSSGRG00000040294)	shank2b (ENSSGRG00000040493)	acte1 (ENSSGRG00000040581)	guca1g (ENSSGRG00000043160)	zgc:101566 (ENSSGRG00000043162)	chst1 (ENSSGRG00000043163) #19	cry2 (ENSSGRG00000043164) #21	mapk8ip1a (ENSSGRG00000043165) ##22	cstpp1 (ENSSGRG00000043173)	ckap5 (ENSSGRG00000043177)	lcat (ENSSGRG00000043185)	pla2g15 (ENSSGRG00000043191)	usb1 (ENSSGRG00000043192)	ENSSGRG00000043194	usb1 (ENSSGRG00000043196)	ENSSGRG00000043197	ccdc113 (ENSSGRG00000043198)	ENSSGRG00000043221	fa2h (ENSSGRG00000043628)	ano10b (ENSSGRG00000043629)	snrkb (ENSSGRG00000043630)	ldhd (ENSSGRG00000043631)	znrf1 (ENSSGRG00000043632)
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	1376															cry2 (ENSCARG00000029854) #21	mapk8ip1a (ENSCARG00000029824) ##22	ckap5 (ENSCARG00000029765)
Goldfish	MODERN SPECIES	45	KLHL25 (ENSCARG00000028265)	ENSCARG00000028236	det1 (ENSCARG00000028213)	map1lc3b (ENSCARG00000028179)	ENSCARG00000028163	dbx1b (ENSCARG00000028158)	prmt7 (ENSCARG00000028095)	ciapin1 (ENSCARG00000028072)	coq9 (ENSCARG00000028017)	shank2b (ENSCARG00000027895)	acte1 (ENSCARG00000027820)	guca1g (ENSCARG00000027811)	zgc:101566 (ENSCARG00000027802)	chst1 (ENSCARG00000027800) #19	cry2 (ENSCARG00000027563) #21	mapk8ip1a (ENSCARG00000027525) ##22	ckap5 (ENSCARG00000027077)	pla2g15 (ENSCARG00000026666)	ZNF319 (ENSCARG00000026656)	usb1 (ENSCARG00000026649)	ENSCARG00000026613	fa2h (ENSCARG00000026594)	ano10b (ENSCARG00000026576)	snrkb (ENSCARG00000026568)	ldhd (ENSCARG00000026354)	znrf1 (ENSCARG00000026341)	gins3 (ENSCARG00000026329)	ndrg4 (ENSCARG00000024959)	ENSCARG00000024908	ENSCARG00000024894	ENSCARG00000024887
Zebrafish	MODERN SPECIES	17	dnajc24 (ENSDARG00000023927)	mpped2 (ENSDARG00000034443)	NAV2 (ENSDARG00000001879)	dbx1b (ENSDARG00000001859)	exoc3l1 (ENSDARG00000051899)	prmt7 (ENSDARG00000051902)	ciapin1 (ENSDARG00000045733)	coq9 (ENSDARG00000023583)	polr2c (ENSDARG00000033596)	shank2b (ENSDARG00000062325)	guca1g (ENSDARG00000045737)	acte1 (ENSDARG00000079111)	zgc:101566 (ENSDARG00000086342)	chst1 (ENSDARG00000088593) #19	cry2 (ENSDARG00000102403) #21	mapk8ip1a (ENSDARG00000102229) ##22	cstpp1 (ENSDARG00000102060)	ckap5 (ENSDARG00000102674)	DRC7 (ENSDARG00000100231)	lcat (ENSDARG00000099424)	pla2g15 (ENSDARG00000103271)	usb1 (ENSDARG00000003841)	ZNF319 (ENSDARG00000062401)	ccdc113 (ENSDARG00000006981)	ENSDARG00000013582	ENSDARG00000101577	fa2h (ENSDARG00000090063)	ano10b (ENSDARG00000018159)	snrkb (ENSDARG00000017665)	ldhd (ENSDARG00000038845)	znrf1 (ENSDARG00000020475)
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00940000157089.A ##22
Hagfish	MODERN SPECIES	1023	ENSEBUG00000009491	ENSEBUG00000005816	ENSEBUG00000002445	ENSEBUG00000016037	ENSEBUG00000014657	AP2A2 (ENSEBUG00000003517)	ENSEBUG00000004769	ENSEBUG00000005223	ENSEBUG00000007022	ENSEBUG00000012444	ENSEBUG00000009450	ENSEBUG00000014734	ENSEBUG00000001242	rps16 (ENSEBUG00000006941)	ENSEBUG00000011270	ENSEBUG00000013720 ##22	ENSEBUG00000011644	ENSEBUG00000003368	ENSEBUG00000007835	ENSEBUG00000007706	lnx2a (ENSEBUG00000001535)	ENSEBUG00000015805	ENSEBUG00000007360	pan3 (ENSEBUG00000012218)	ENSEBUG00000005461	ENSEBUG00000002161	ENSEBUG00000003046	ENSEBUG00000008965	ENSEBUG00000013489	ENSEBUG00000004114	SH3RF1 (ENSEBUG00000015770)