Hystricomorpha_a	ANCESTRAL SPECIES	17	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204	ENSGT00940000154533.b.d	ENSGT00940000154714	ENSGT00950000182837.b.b	ENSGT00940000157055	ENSGT00940000155515.a.b.b	ENSGT00930000150980.a	ENSGT00390000009987	ENSGT00390000010523.c.b	ENSGT00940000158904	ENSGT01080000257365.b.a.a.b.a	ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #23	ENSGT01090000260082.d.a.a.a.b #24	ENSGT00530000063734.a #25	ENSGT00940000158842 #26	ENSGT00940000160160 #27	ENSGT00940000161094 #28	ENSGT00940000153988.A #29	ENSGT00940000155773.b #30	ENSGT00940000154574.d.f #31	ENSGT00940000155655.B #32	ENSGT00940000157230 #33	ENSGT00940000155359 #34	ENSGT00530000063836.a #36	ENSGT01050000244842.a.b.a #37	ENSGT01050000244842.a.b.b.a.a.a ##37
Hystricomorpha_b	ANCESTRAL SPECIES	24															ENSGT00950000183038.a.b.b.b #21	ENSGT00390000001718 #22	ENSGT00940000159241 #23	ENSGT01090000260082.d.a.a.a.b #24	ENSGT00530000063734.a #25	ENSGT00940000158842 #26	ENSGT00940000160160 #27	ENSGT00940000161094 #28	ENSGT00940000153988.A #29	ENSGT00940000155773.b #30	ENSGT00940000154574.d.f #31	ENSGT00940000155655.B #32	ENSGT00940000157230 #33	ENSGT00940000155359 #34	ENSGT00530000063836.a #36	ENSGT01050000244842.a.b.a #37	ENSGT01050000244842.a.b.b.a.a.a ##37
Long-tailed chinchilla	MODERN SPECIES	156															NR4A2 (ENSCLAG00000003290) #21	GPD2 (ENSCLAG00000002866) #22	GALNT5 (ENSCLAG00000003428) #23	ERMN (ENSCLAG00000003341) #24	CYTIP (ENSCLAG00000003247) #25	ACVR1C (ENSCLAG00000003034) #26	ACVR1 (ENSCLAG00000004342) #27	UPP2 (ENSCLAG00000003919) #28	CCDC148 (ENSCLAG00000003622) #29	PKP4 (ENSCLAG00000005831) #30	DAPL1 (ENSCLAG00000004812) #31	TANC1 (ENSCLAG00000004542) #32	ENSCLAG00000007913 #33	BAZ2B (ENSCLAG00000006190) #34	ENSCLAG00000009790 #35	MARCHF7 (ENSCLAG00000009318) #36	CD302 (ENSCLAG00000012904) #37
Degu	MODERN SPECIES	73											ENSODEG00000014301	ENSODEG00000014644	ENSODEG00000020160	ENSODEG00000014372	NR4A2 (ENSODEG00000014223) #21	GPD2 (ENSODEG00000013945) #22	ENSODEG00000014559	GALNT5 (ENSODEG00000014096) #23	ERMN (ENSODEG00000014133) #24	ENSODEG00000014529 #25	ACVR1C (ENSODEG00000013991) #26	ACVR1 (ENSODEG00000014264) #27	UPP2 (ENSODEG00000014593) #28	CCDC148 (ENSODEG00000014894) #29	ENSODEG00000020204	PKP4 (ENSODEG00000014779) #30	DAPL1 (ENSODEG00000014464) #31	TANC1 (ENSODEG00000014910) #32	WDSUB1 (ENSODEG00000014178) #33	BAZ2B (ENSODEG00000014127) #34	ENSODEG00000015125
Guinea pig	MODERN SPECIES	3	NMI (ENSCPOG00000013053)	TNFAIP6 (ENSCPOG00000007974)	ENSCPOG00000038795	RIF1 (ENSCPOG00000037898)	NEB (ENSCPOG00000005161)	ARL5A (ENSCPOG00000005209)	CACNB4 (ENSCPOG00000026052)	STAM2 (ENSCPOG00000002847)	FMNL2 (ENSCPOG00000013482)	PRPF40A (ENSCPOG00000013494)	RPRM (ENSCPOG00000005597)	GALNT13 (ENSCPOG00000013115)	ENSCPOG00000005051	ENSCPOG00000034740	NR4A2 (ENSCPOG00000008225) #21	GPD2 (ENSCPOG00000000193) #22	GALNT5 (ENSCPOG00000000913) #23	CYTIP (ENSCPOG00000034296) #25	ACVR1C (ENSCPOG00000007111) #26	ACVR1 (ENSCPOG00000008791) #27	UPP2 (ENSCPOG00000003006) #28	CCDC148 (ENSCPOG00000004172) #29	PKP4 (ENSCPOG00000012130) #30	DAPL1 (ENSCPOG00000033811) #31	TANC1 (ENSCPOG00000008679) #32	WDSUB1 (ENSCPOG00000008696) #33	BAZ2B (ENSCPOG00000015233) #34	MARCHF7 (ENSCPOG00000003969) #36	CD302 (ENSCPOG00000003976) #37	LY75 (ENSCPOG00000008372) ##37	PLA2R1 (ENSCPOG00000008394) ##37