Percora_a	ANCESTRAL SPECIES	17	ENSGT00940000155735	ENSGT00940000157251 #7	ENSGT00940000159876 #9	ENSGT00890000139406.b #10	ENSGT00550000075072 #11	ENSGT00940000158519 #12	ENSGT00940000159357 #13	ENSGT00390000005653 #14	ENSGT00940000155845 #16	ENSGT00390000017221 #17	ENSGT00390000007050 #18	ENSGT00990000205314	ENSGT00940000158419 #19	ENSGT00390000008031 #20	ENSGT00390000013680.a #21	ENSGT00940000158066 #22	ENSGT00940000156506.b #23	ENSGT00840000129953 #24	ENSGT00940000161536 #25	ENSGT00940000160713 #26	ENSGT00940000160172 #27	ENSGT00530000063509.B #28	ENSGT00940000160943 #29	ENSGT00940000158715 #30	ENSGT00940000153110.D #31	ENSGT00550000075100 #32	ENSGT00390000013005 #33	ENSGT00730000111354 #34	ENSGT00940000158958 #35	ENSGT00940000157433 #36	ENSGT00510000046406.f.b.a.a.d #37
Bovidae	ANCESTRAL SPECIES	17	ENSGT00940000155735	ENSGT00940000157251.kb.a #7	ENSGT00940000159876 #9	ENSGT00890000139406.b #10	ENSGT00550000075072 #11	ENSGT00940000158519 #12	ENSGT00940000159357 #13	ENSGT00390000005653 #14	ENSGT00940000155845 #16	ENSGT00390000017221 #17	ENSGT00390000007050 #18	ENSGT00990000205314	ENSGT00940000158419 #19	ENSGT00390000008031 #20	ENSGT00390000013680.a #21	ENSGT00940000158066 #22	ENSGT00940000156506.b #23	ENSGT00840000129953 #24	ENSGT00940000161536 #25	ENSGT00940000160713 #26	ENSGT00940000160172 #27	ENSGT00530000063509.B #28	ENSGT00940000160943 #29	ENSGT00940000158715 #30	ENSGT00940000153110.D #31	ENSGT00550000075100 #32	ENSGT00390000013005 #33	ENSGT00730000111354 #34	ENSGT00940000158958 #35	ENSGT00940000157433 #36	ENSGT00510000046406.f.b.a.a.d #37
Caprinae	ANCESTRAL SPECIES	17	ENSGT00910000144281	ENSGT00940000155735	ENSGT00940000157251.kb.a #7	ENSGT00940000159876 #9	ENSGT00890000139406.b #10	ENSGT00550000075072 #11	ENSGT00940000158519 #12	ENSGT00940000159357 #13	ENSGT00390000005653 #14	ENSGT00940000155845 #16	ENSGT00390000017221 #17	ENSGT00390000007050 #18	ENSGT00940000158419 #19	ENSGT00390000008031 #20	ENSGT00390000013680.a #21	ENSGT00940000158066 #22	ENSGT00940000156506.b #23	ENSGT00840000129953 #24	ENSGT00940000161536 #25	ENSGT00940000160713 #26	ENSGT00940000160172 #27	ENSGT00530000063509.B #28	ENSGT00940000160943 #29	ENSGT00940000158715 #30	ENSGT00940000153110.D #31	ENSGT00550000075100 #32	ENSGT00390000013005 #33	ENSGT00730000111354 #34	ENSGT00940000158958 #35	ENSGT00940000157433 #36	ENSGT00510000046406.f.b.a.a.d #37
Goat	MODERN SPECIES	8	ENSCHIG00000017044 #7	ENSCHIG00000005694 #8	VSIG10 (ENSCHIG00000017491) #9	WSB2 (ENSCHIG00000011456) #10	RFC5 (ENSCHIG00000016947) #11	KSR2 (ENSCHIG00000023716) #12	NOS1 (ENSCHIG00000025391) #13	FBXO21 (ENSCHIG00000013377) #14	ENSCHIG00000019388 #15	TESC (ENSCHIG00000026339) #16	FBXW8 (ENSCHIG00000020348) #17	HRK (ENSCHIG00000008647) #18	RNFT2 (ENSCHIG00000022406) #19	SPRING1 (ENSCHIG00000017588) #20	MED13L (ENSCHIG00000017300) #21	TBX3 (ENSCHIG00000012328) #22	TBX5 (ENSCHIG00000023939) #23	RBM19 (ENSCHIG00000014917) #24	LHX5 (ENSCHIG00000022961) #25	SDSL (ENSCHIG00000012156) #26	SDS (ENSCHIG00000021911) #27	PLBD2 (ENSCHIG00000025113) #28	DTX1 (ENSCHIG00000018624) #29	RASAL1 (ENSCHIG00000010017) #30	CFAP73 (ENSCHIG00000013401) #31	DDX54 (ENSCHIG00000026798) #32	RITA1 (ENSCHIG00000010968) #33	IQCD (ENSCHIG00000017847) #34	TPCN1 (ENSCHIG00000027241) #35	SLC8B1 (ENSCHIG00000025545) #36	ENSCHIG00000023778 #37
Rambouillet Sheep	MODERN SPECIES	8	HSPB8 (ENSOARG00020010063)	SRRM4 (ENSOARG00020010126)	SUDS3 (ENSOARG00020010261)	ENSOARG00020010362	ENSOARG00020010604 #7	VSIG10 (ENSOARG00020010738) #9	WSB2 (ENSOARG00020010900) #10	RFC5 (ENSOARG00020011072) #11	KSR2 (ENSOARG00020011563) #12	NOS1 (ENSOARG00020011936) #13	FBXO21 (ENSOARG00020012804) #14	TESC (ENSOARG00020012942) #16	HRK (ENSOARG00020013030) #18	C12orf49 (ENSOARG00020013064) #20	MED13L (ENSOARG00020013227) #21	TBX3 (ENSOARG00020014491) #22	TBX5 (ENSOARG00020014733) #23	RBM19 (ENSOARG00020015024) #24	LHX5 (ENSOARG00020015360) #25	SDSL (ENSOARG00020015407) #26	SDS (ENSOARG00020015481) #27	PLBD2 (ENSOARG00020015615) #28	DTX1 (ENSOARG00020015882) #29	CFAP73 (ENSOARG00020016081) #31	DDX54 (ENSOARG00020016141) #32	RITA1 (ENSOARG00020016329) #33	IQCD (ENSOARG00020016405) #34	TPCN1 (ENSOARG00020016480) #35	SLC8B1 (ENSOARG00020017327) #36	OAS2 (ENSOARG00020017574) #37	ENSOARG00020017761 ##37
Bovinae	ANCESTRAL SPECIES	13	ENSGT00940000157251.kb.a #7	ENSGT00940000159876 #9	ENSGT00890000139406.b #10	ENSGT00550000075072 #11	ENSGT00940000158519 #12	ENSGT00940000159357 #13	ENSGT00390000005653 #14	ENSGT00940000155845 #16	ENSGT00970000197126	ENSGT00390000017221 #17	ENSGT00390000007050 #18	ENSGT00990000205314	ENSGT00940000158419 #19	ENSGT00390000008031 #20	ENSGT00390000013680.a #21	ENSGT00940000158066 #22	ENSGT00940000156506.b #23	ENSGT00840000129953 #24	ENSGT00940000161536 #25	ENSGT00940000160713 #26	ENSGT00940000160172 #27	ENSGT00530000063509.B #28	ENSGT00940000160943 #29	ENSGT00940000158715 #30	ENSGT00940000153110.D #31	ENSGT00550000075100 #32	ENSGT00390000013005 #33	ENSGT00730000111354 #34	ENSGT00940000158958 #35	ENSGT00940000157433 #36	ENSGT00510000046406.f.b.a.a.d #37
Bos	ANCESTRAL SPECIES	14	ENSGT00940000157251.kb.a #7	ENSGT00940000159876 #9	ENSGT00890000139406.b #10	ENSGT00550000075072 #11	ENSGT00940000158519 #12	ENSGT00940000159357 #13	ENSGT00390000005653 #14	ENSGT00940000155845 #16	ENSGT00970000197126	ENSGT00390000017221 #17	ENSGT00390000007050 #18	ENSGT00990000205314	ENSGT00940000158419 #19	ENSGT00390000008031 #20	ENSGT00390000013680.a #21	ENSGT00940000158066 #22	ENSGT00940000156506.b #23	ENSGT00840000129953 #24	ENSGT00940000161536 #25	ENSGT00940000160713 #26	ENSGT00940000160172 #27	ENSGT00530000063509.B #28	ENSGT00940000160943 #29	ENSGT00940000158715 #30	ENSGT00940000153110.D #31	ENSGT00550000075100 #32	ENSGT00390000013005 #33	ENSGT00730000111354 #34	ENSGT00940000158958 #35	ENSGT00940000157433 #36	ENSGT00510000046406.f.b.a.a.d #37
Bos_a	ANCESTRAL SPECIES	14	ENSGT00940000155735	ENSGT00940000157251.kb.a #7	ENSGT00940000163122	ENSGT00940000159876 #9	ENSGT00890000139406.b #10	ENSGT00550000075072 #11	ENSGT00940000158519 #12	ENSGT00940000159357 #13	ENSGT00390000005653 #14	ENSGT00940000155845 #16	ENSGT00390000017221 #17	ENSGT00390000007050 #18	ENSGT00940000158419 #19	ENSGT00390000008031 #20	ENSGT00390000013680.a #21	ENSGT00940000158066 #22	ENSGT00940000156506.b #23	ENSGT00840000129953 #24	ENSGT00940000161536 #25	ENSGT00940000160713 #26	ENSGT00940000160172 #27	ENSGT00530000063509.B #28	ENSGT00940000160943 #29	ENSGT00940000158715 #30	ENSGT00940000153110.D #31	ENSGT00550000075100 #32	ENSGT00390000013005 #33	ENSGT00730000111354 #34	ENSGT00940000158958 #35	ENSGT00940000157433 #36	ENSGT00510000046406.f.b.a.a.d #37
Domestic yak	MODERN SPECIES	7	SUDS3 (ENSBGRG00000017204)	TAOK3 (ENSBGRG00000017791)	ENSBGRG00000018498 #7	ENSBGRG00000018570 #10	RFC5 (ENSBGRG00000010710) #11	KSR2 (ENSBGRG00000011154) #12	NOS1 (ENSBGRG00000011775) #13	FBXO21 (ENSBGRG00000012215) #14	TESC (ENSBGRG00000012499) #16	FBXW8 (ENSBGRG00000012799) #17	HRK (ENSBGRG00000013442) #18	RNFT2 (ENSBGRG00000013482) #19	SPRING1 (ENSBGRG00000013613) #20	MED13L (ENSBGRG00000013849) #21	ENSBGRG00000015091	TBX3 (ENSBGRG00000015175) #22	TBX5 (ENSBGRG00000015496) #23	RBM19 (ENSBGRG00000015721) #24	LHX5 (ENSBGRG00000015862) #25	SDSL (ENSBGRG00000015962) #26	SDS (ENSBGRG00000016001) #27	PLBD2 (ENSBGRG00000016096) #28	DTX1 (ENSBGRG00000016518) #29	RASAL1 (ENSBGRG00000016591) #30	CFAP73 (ENSBGRG00000016833) #31	DDX54 (ENSBGRG00000016939) #32	RITA1 (ENSBGRG00000017024) #33	IQCD (ENSBGRG00000017100) #34	TPCN1 (ENSBGRG00000017228) #35	SLC8B1 (ENSBGRG00000018280) #36	OAS2 (ENSBGRG00000018710) #37
Wild yak	MODERN SPECIES	737																TBX3 (ENSBMUG00000004036) #22	TBX5 (ENSBMUG00000004084) #23	RBM19 (ENSBMUG00000004157) #24
Bos_b	ANCESTRAL SPECIES	13	ENSGT00940000157251.kb.a #7	ENSGT00940000159876 #9	ENSGT00890000139406.b #10	ENSGT00550000075072 #11	ENSGT00940000158519 #12	ENSGT00940000159357 #13	ENSGT00390000005653 #14	ENSGT00940000155845 #16	ENSGT00970000197126	ENSGT00390000017221 #17	ENSGT00390000007050 #18	ENSGT00990000205314	ENSGT00940000158419 #19	ENSGT00390000008031 #20	ENSGT00390000013680.a #21	ENSGT00940000158066 #22	ENSGT00940000156506.b #23	ENSGT00840000129953 #24	ENSGT00940000161536 #25	ENSGT00940000160713 #26	ENSGT00940000160172 #27	ENSGT00530000063509.B #28	ENSGT00940000160943 #29	ENSGT00940000158715 #30	ENSGT00940000153110.D #31	ENSGT00550000075100 #32	ENSGT00390000013005 #33	ENSGT00730000111354 #34	ENSGT00940000158958 #35	ENSGT00940000157433 #36	ENSGT00510000046406.f.b.a.a.d #37
Cow	MODERN SPECIES	8	SUDS3 (ENSBTAG00000019757)	TAOK3 (ENSBTAG00000012550)	PEBP1 (ENSBTAG00000018115) #7	WSB2 (ENSBTAG00000007139) #9	RFC5 (ENSBTAG00000007137) #11	KSR2 (ENSBTAG00000044119) #12	NOS1 (ENSBTAG00000002023) #13	FBXO21 (ENSBTAG00000032097) #14	TESC (ENSBTAG00000044078) #16	ENSBTAG00000053074	FBXW8 (ENSBTAG00000036183) #17	ENSBTAG00000037415	RNFT2 (ENSBTAG00000043976) #19	SPRING1 (ENSBTAG00000047139) #20	MED13L (ENSBTAG00000001888) #21	TBX3 (ENSBTAG00000021706) #22	TBX5 (ENSBTAG00000011384) #23	RBM19 (ENSBTAG00000031824) #24	LHX5 (ENSBTAG00000003107) #25	SDSL (ENSBTAG00000008945) #26	SDS (ENSBTAG00000031814) #27	PLBD2 (ENSBTAG00000019040) #28	DTX1 (ENSBTAG00000016738) #29	RASAL1 (ENSBTAG00000016739) #30	CFAP73 (ENSBTAG00000011924) #31	DDX54 (ENSBTAG00000011930) #32	RITA1 (ENSBTAG00000011937) #33	IQCD (ENSBTAG00000001806) #34	TPCN1 (ENSBTAG00000011102) #35	SLC8B1 (ENSBTAG00000011103) #36	OAS2 (ENSBTAG00000014628) #37
Hybrid Bos Indicus	MODERN SPECIES	8	TAOK3 (ENSBIXG00005023697)	ENSBIXG00005023724 #7	ENSBIXG00005023844 #10	RFC5 (ENSBIXG00005024039) #11	KSR2 (ENSBIXG00005004124) #12	NOS1 (ENSBIXG00005024235) #13	FBXO21 (ENSBIXG00005024317) #14	TESC (ENSBIXG00005007579) #16	FBXW8 (ENSBIXG00005024524) #17	HRK (ENSBIXG00005024550) #18	ENSBIXG00005024570	RNFT2 (ENSBIXG00005024660) #19	SPRING1 (ENSBIXG00005024707) #20	MED13L (ENSBIXG00005024913) #21	ENSBIXG00005024963	TBX3 (ENSBIXG00005025053) #22	TBX5 (ENSBIXG00005025163) #23	RBM19 (ENSBIXG00005006068) #24	LHX5 (ENSBIXG00005004308) #25	SDSL (ENSBIXG00005004317) #26	SDS (ENSBIXG00005025428) #27	PLBD2 (ENSBIXG00005004336) #28	ENSBIXG00005025488	DTX1 (ENSBIXG00005025525) #29	RASAL1 (ENSBIXG00005025553) #30	CFAP73 (ENSBIXG00005025597) #31	DDX54 (ENSBIXG00005025638) #32	RITA1 (ENSBIXG00005025655) #33	IQCD (ENSBIXG00005004376) #34	TPCN1 (ENSBIXG00005025891) #35	SLC8B1 (ENSBIXG00005026028) #36
American bison	MODERN SPECIES	3351	TAOK3 (ENSBBBG00000003337)	PEBP1 (ENSBBBG00000003313)	VSIG10 (ENSBBBG00000014404) #9	WSB2 (ENSBBBG00000014396) #10	RFC5 (ENSBBBG00000014376) #11	KSR2 (ENSBBBG00000014353) #12	NOS1 (ENSBBBG00000009115) #13	FBXO21 (ENSBBBG00000002887) #14	TESC (ENSBBBG00000001445) #16	ENSBBBG00000014180	FBXW8 (ENSBBBG00000014176) #17	HRK (ENSBBBG00000014164) #18	RNFT2 (ENSBBBG00000006988) #19	SPRING1 (ENSBBBG00000014144) #20	MED13L (ENSBBBG00000003188) #21	ENSBBBG00000007982 #22	TBX5 (ENSBBBG00000003168) #23	RBM19 (ENSBBBG00000007074) #24	LHX5 (ENSBBBG00000003132) #25	SDSL (ENSBBBG00000003128) #26	SDS (ENSBBBG00000003119) #27	PLBD2 (ENSBBBG00000003114) #28	ENSBBBG00000014016 #29	RASAL1 (ENSBBBG00000014008) #30	CFAP73 (ENSBBBG00000013966) #31	DDX54 (ENSBBBG00000003054) #32	RITA1 (ENSBBBG00000003034) #33	IQCD (ENSBBBG00000007073) #34	TPCN1 (ENSBBBG00000013906) #35	SLC8B1 (ENSBBBG00000002979) #36	OAS2 (ENSBBBG00000002953) #37
Siberian musk deer	MODERN SPECIES	1175	SUDS3 (ENSMMSG00000020439)	TAOK3 (ENSMMSG00000020380)	ENSMMSG00000020362 #7	VSIG10 (ENSMMSG00000020331) #9	WSB2 (ENSMMSG00000020204) #10	RFC5 (ENSMMSG00000020129) #11	KSR2 (ENSMMSG00000020005) #12	NOS1 (ENSMMSG00000019709) #13	FBXO21 (ENSMMSG00000019649) #14	TESC (ENSMMSG00000019593) #16	FBXW8 (ENSMMSG00000019538) #17	HRK (ENSMMSG00000019523) #18	RNFT2 (ENSMMSG00000019445) #19	SPRING1 (ENSMMSG00000019408) #20	MED13L (ENSMMSG00000019318) #21	TBX3 (ENSMMSG00000019228) #22	ENSMMSG00000019209	TBX5 (ENSMMSG00000019164) #23	ENSMMSG00000019110	RBM19 (ENSMMSG00000019072) #24	LHX5 (ENSMMSG00000019024) #25	SDSL (ENSMMSG00000018970) #26	SDS (ENSMMSG00000018945) #27	PLBD2 (ENSMMSG00000018894) #28	DTX1 (ENSMMSG00000018853) #29	RASAL1 (ENSMMSG00000018718) #30	CFAP73 (ENSMMSG00000018652) #31	DDX54 (ENSMMSG00000018478) #32	RITA1 (ENSMMSG00000018441) #33	IQCD (ENSMMSG00000018420) #34	TPCN1 (ENSMMSG00000018292) #35