Mammalia	ANCESTRAL SPECIES	1	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00950000183201.b.a.b	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00950000186280	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339	ENSGT00390000008611
Theria	ANCESTRAL SPECIES	6	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00950000183201.b.a.b	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00950000186280	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339	ENSGT00390000008611
Eutheria	ANCESTRAL SPECIES	2	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00950000183201.b.a.b	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00950000186280	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339	ENSGT00390000008611
Boreoeutheria	ANCESTRAL SPECIES	8	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00910000148499	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00950000186280	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339
Euarchontoglires	ANCESTRAL SPECIES	9	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00910000148499	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00960000189829	ENSGT00950000186280	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339
Euarchontoglires_A	ANCESTRAL SPECIES	9	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00910000148499	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00960000189829	ENSGT00950000186280	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339
Glires	ANCESTRAL SPECIES	8	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00910000148499	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00960000189829	ENSGT00950000186280	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339
Rodentia	ANCESTRAL SPECIES	13	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00910000148499	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00960000189829	ENSGT00950000186280	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339
Rodentia_A	ANCESTRAL SPECIES	24	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00910000148499	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339	ENSGT00390000008611
Sciuridae	ANCESTRAL SPECIES	38	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00910000148499	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00960000191551 #26	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339
Marmotini	ANCESTRAL SPECIES	45	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00910000148499	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00960000191551 #26	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339	ENSGT00390000008611
Alpin marmot	MODERN SPECIES	14					MGAT4D (ENSMMMG00000000565) #11	ELMOD2 (ENSMMMG00000000593) #12	UCP1 (ENSMMMG00000000628) #13	TBC1D9 (ENSMMMG00000000662) #14	RNF150 (ENSMMMG00000000771) #15	ZNF330 (ENSMMMG00000000807) #16	IL15 (ENSMMMG00000000844) #17	INPP4B (ENSMMMG00000000910) #18	ENSMMMG00000001088 #19	ENSMMMG00000001108 #20	USP38 (ENSMMMG00000001127) #21	GAB1 (ENSMMMG00000001157) #22	ENSMMMG00000001200 #23	SMARCA5 (ENSMMMG00000001227) #24	FREM3 (ENSMMMG00000001322) #25	ENSMMMG00000001356 #26	HHIP (ENSMMMG00000001370) #27	ANAPC10 (ENSMMMG00000001410) #28	ABCE1 (ENSMMMG00000001426) #29	OTUD4 (ENSMMMG00000001476) #30	SMAD1 (ENSMMMG00000001530) #31	MMAA (ENSMMMG00000001552) #32	ZNF827 (ENSMMMG00000001587) #33	LSM6 (ENSMMMG00000001638) #34	REELD1 (ENSMMMG00000001660) #35	SLC10A7 (ENSMMMG00000001688) #36	ENSMMMG00000001799 #37
Marmotini_b	ANCESTRAL SPECIES	115	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828.bb.a.a	ENSGT00390000008828.bb.a.b	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00910000148499	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00960000191551 #26	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339	ENSGT00390000008611
Arctic ground squirrel	MODERN SPECIES	107															USP38 (ENSUPAG00010000887) #21	GAB1 (ENSUPAG00010000769) #22	ENSUPAG00010000759 #23	SMARCA5 (ENSUPAG00010000746) #24	FREM3 (ENSUPAG00010000720) #25	ENSUPAG00010000702 #26	HHIP (ENSUPAG00010000675) #27	ANAPC10 (ENSUPAG00010000613) #28	ABCE1 (ENSUPAG00010000589) #29	OTUD4 (ENSUPAG00010000528) #30	ENSUPAG00010000524	SMAD1 (ENSUPAG00010000470) #31	MMAA (ENSUPAG00010000442) #32	ZNF827 (ENSUPAG00010000383) #33	LSM6 (ENSUPAG00010000353) #34	REELD1 (ENSUPAG00010000334) #35	SLC10A7 (ENSUPAG00010000172) #36
Squirrel	MODERN SPECIES	135	RAB33B (ENSSTOG00000027511)	SETD7 (ENSSTOG00000004420)	MGST2 (ENSSTOG00000004437)	MAML3 (ENSSTOG00000004454)	ENSSTOG00000028529	CLGN (ENSSTOG00000003055)	MGAT4D (ENSSTOG00000030895) #11	ELMOD2 (ENSSTOG00000022401) #12	UCP1 (ENSSTOG00000003104) #13	TBC1D9 (ENSSTOG00000001453) #14	RNF150 (ENSSTOG00000029908) #15	ZNF330 (ENSSTOG00000002498) #16	IL15 (ENSSTOG00000005776) #17	INPP4B (ENSSTOG00000005582) #18	USP38 (ENSSTOG00000025902) #21	GAB1 (ENSSTOG00000027891) #22	SMARCA5 (ENSSTOG00000010683) #24	FREM3 (ENSSTOG00000026754) #25	HHIP (ENSSTOG00000006708) #27	ENSSTOG00000022563	ANAPC10 (ENSSTOG00000007739) #28	ABCE1 (ENSSTOG00000004621) #29	OTUD4 (ENSSTOG00000004649) #30	SMAD1 (ENSSTOG00000010836) #31	MMAA (ENSSTOG00000010843) #32	ZNF827 (ENSSTOG00000007761) #33	LSM6 (ENSSTOG00000002678) #34	ENSSTOG00000030757	SLC10A7 (ENSSTOG00000023850) #36	POU4F2 (ENSSTOG00000021113)	TTC29 (ENSSTOG00000003372)
Eurasian red squirrel	MODERN SPECIES	18	NAA15 (ENSSVLG00005007200)	RAB33B (ENSSVLG00005007228)	SETD7 (ENSSVLG00005007262)	MAML3 (ENSSVLG00005007329)	SCOC (ENSSVLG00005007378)	CLGN (ENSSVLG00005007446)	MGAT4D (ENSSVLG00005007541) #11	ELMOD2 (ENSSVLG00005007698) #12	UCP1 (ENSSVLG00005007755) #13	TBC1D9 (ENSSVLG00005007825) #14	RNF150 (ENSSVLG00005007968) #15	ZNF330 (ENSSVLG00005008101) #16	IL15 (ENSSVLG00005008140) #17	INPP4B (ENSSVLG00005008272) #18	USP38 (ENSSVLG00005008534) #21	GAB1 (ENSSVLG00005008645) #22	SMARCA5 (ENSSVLG00005008713) #24	FREM3 (ENSSVLG00005008764) #25	ENSSVLG00005008869 #26	HHIP (ENSSVLG00005009063) #27	ANAPC10 (ENSSVLG00005009144) #28	ENSSVLG00005009213 #29	ENSSVLG00005009329 #30	ENSSVLG00005009597 #31	ENSSVLG00005009634	MMAA (ENSSVLG00005009664) #32	C4orf51 (ENSSVLG00005009715)	ZNF827 (ENSSVLG00005009794) #33	LSM6 (ENSSVLG00005009971) #34	REELD1 (ENSSVLG00005010007) #35	SLC10A7 (ENSSVLG00005010105) #36
Hystricomorpha	ANCESTRAL SPECIES	38										ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00510000047351.b	ENSGT00940000162501 #25	ENSGT00940000158660 #27	ENSGT00390000013722.a.a #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00390000011932 #36	ENSGT00940000160339	ENSGT00390000008611	ENSGT01100000263512.a.a.b.d
Hystricomorpha_a	ANCESTRAL SPECIES	34	ENSGT00940000160791.A	ENSGT00940000155694	ENSGT00390000018433.s.b	ENSGT01050000244827.C.c.a.a	ENSGT00940000154778	ENSGT00940000154895.a.a	ENSGT00390000010038	ENSGT00940000159333	ENSGT00940000159559	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00510000047351.b	ENSGT00940000162501 #25	ENSGT00940000158660 #27	ENSGT00390000013722.a.a #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00390000011932 #36	ENSGT00940000160339	ENSGT00390000008611	ENSGT01100000263512.a.a.b.d
Hystricomorpha_b	ANCESTRAL SPECIES	89	ENSGT00940000160791.A	ENSGT00940000155694	ENSGT00390000018433.s.b	ENSGT01050000244827.C.c.a.a	ENSGT00940000154778	ENSGT00940000154895.a.a	ENSGT00390000010038	ENSGT00940000159333	ENSGT00940000159559	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22
Long-tailed chinchilla	MODERN SPECIES	178	MAB21L2 (ENSCLAG00000017837)	LRBA (ENSCLAG00000009578)	DCLK2 (ENSCLAG00000009217)	IQCM (ENSCLAG00000008040)	NR3C2 (ENSCLAG00000007723)	ARHGAP10 (ENSCLAG00000007081)	ENSCLAG00000006732	LRAT (ENSCLAG00000006584)	ENSCLAG00000005907	TBC1D9 (ENSCLAG00000005220) #14	RNF150 (ENSCLAG00000004503) #15	ZNF330 (ENSCLAG00000004258) #16	IL15 (ENSCLAG00000004056) #17	INPP4B (ENSCLAG00000007216) #18	USP38 (ENSCLAG00000014109) #21	GAB1 (ENSCLAG00000005522) #22
Degu	MODERN SPECIES	301											RNF150 (ENSODEG00000001391) #15	ENSODEG00000000107 #16	IL15 (ENSODEG00000000125) #17	INPP4B (ENSODEG00000000245) #18	USP38 (ENSODEG00000000359) #21	GAB1 (ENSODEG00000000395) #22
Guinea pig	MODERN SPECIES	7	PRSS48 (ENSCPOG00000000281)	SH3D19 (ENSCPOG00000008883)	RPS3A (ENSCPOG00000015569)	MAB21L2 (ENSCPOG00000034419)	LRBA (ENSCPOG00000008202)	DCLK2 (ENSCPOG00000008193)	IQCM (ENSCPOG00000022670)	NR3C2 (ENSCPOG00000007770)	ARHGAP10 (ENSCPOG00000007759)	TBC1D9 (ENSCPOG00000007373) #14	RNF150 (ENSCPOG00000004096) #15	ZNF330 (ENSCPOG00000011875) #16	IL15 (ENSCPOG00000008232) #17	INPP4B (ENSCPOG00000026234) #18	USP38 (ENSCPOG00000008971) #21	GAB1 (ENSCPOG00000031770) #22	LRAT (ENSCPOG00000034177)	FREM3 (ENSCPOG00000038428) #25	HHIP (ENSCPOG00000023375) #27	ENSCPOG00000031256	ANAPC10 (ENSCPOG00000032592) #28	ABCE1 (ENSCPOG00000007367) #29	OTUD4 (ENSCPOG00000007371) #30	SMAD1 (ENSCPOG00000009073) #31	MMAA (ENSCPOG00000004149) #32	ZNF827 (ENSCPOG00000009087) #33	LSM6 (ENSCPOG00000032655) #34	SLC10A7 (ENSCPOG00000015391) #36	POU4F2 (ENSCPOG00000013770)	TTC29 (ENSCPOG00000007443)	ENSCPOG00000040663
Naked mole-rat female	MODERN SPECIES	22	RNF150 (ENSHGLG00000000594) #15	ENSHGLG00000048416	ZNF330 (ENSHGLG00000000725) #16	ENSHGLG00000042945	ENSHGLG00000007865	IL15 (ENSHGLG00000038275) #17	ENSHGLG00000047631	ENSHGLG00000001548	ENSHGLG00000019770	ENSHGLG00000049550	ENSHGLG00000042451	ENSHGLG00000000870 #18	ENSHGLG00000049616	ENSHGLG00000001875 #21	ENSHGLG00000038593	ENSHGLG00000002344 #22	ENSHGLG00000032409	LRAT (ENSHGLG00000045268)	ENSHGLG00000000458	ENSHGLG00000000499 #27	ENSHGLG00000001008	ENSHGLG00000041757	ENSHGLG00000048241	ANAPC10 (ENSHGLG00000038398) #28	ABCE1 (ENSHGLG00000001909) #29	ENSHGLG00000046999 #30	ENSHGLG00000050361	ENSHGLG00000000238 #31	MMAA (ENSHGLG00000043526) #32	ZNF827 (ENSHGLG00000002037) #33	ENSHGLG00000032143
Rodentia_B	ANCESTRAL SPECIES	30	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00960000189829	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00390000011932 #36	ENSGT00940000160339	ENSGT00390000008611
Myomorpha	ANCESTRAL SPECIES	41	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00960000189829	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00390000011932 #36	ENSGT00940000160339	ENSGT00390000008611
Muroidea	ANCESTRAL SPECIES	56	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00960000189829	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00390000011932 #36	ENSGT00940000153425.a.a.b.a	ENSGT00940000160339
Muroidea_A	ANCESTRAL SPECIES	16	ENSGT00950000182886.a.a.b	ENSGT00390000018759	ENSGT00940000161377	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00960000189829	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00390000011932 #36	ENSGT00940000153425.a.a.b.a	ENSGT00940000160339
Cricetidae	ANCESTRAL SPECIES	7	ENSGT00940000160312	ENSGT00950000182886.a.a.b	ENSGT00390000018759	ENSGT00940000161377	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00390000011932 #36	ENSGT00940000153425.a.a.b.a	ENSGT00940000160339	ENSGT00390000008611	ENSGT01100000263512.a.a.b
Cricetinae	ANCESTRAL SPECIES	40	ENSGT01030000234559.a.a.b.a	ENSGT00390000003420.a.a	ENSGT00940000160312	ENSGT00950000182886.a.a.b	ENSGT00390000018759	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00390000011932 #36	ENSGT00940000153425.a.a.b.a	ENSGT00940000160339	ENSGT00390000008611	ENSGT01100000263512.a.a.b
Chinese hamster chok1gshd	MODERN SPECIES	226	Scoc (ENSCGRG00001016489)	Clgn (ENSCGRG00001017080)	Mgat4d (ENSCGRG00001018073) #11	Elmod2 (ENSCGRG00001019628) #12	Ucp1 (ENSCGRG00001020013) #13	Tbc1d9 (ENSCGRG00001021936) #14	ENSCGRG00001016473	ENSCGRG00001022655	Rnf150 (ENSCGRG00001022877) #15	ENSCGRG00001023417	ENSCGRG00001014103	Zfp330 (ENSCGRG00001001331) #16	Il15 (ENSCGRG00001010668) #17	Inpp4b (ENSCGRG00001016742) #18	Usp38 (ENSCGRG00001008922) #21	Gab1 (ENSCGRG00001010681) #22	Smarca5 (ENSCGRG00001012719) #24	Hhip (ENSCGRG00001017452) #27	ENSCGRG00001017973 #28	Abce1 (ENSCGRG00001000394) #29	Otud4 (ENSCGRG00001004451) #30	ENSCGRG00001006596 #31	Mmaa (ENSCGRG00001013056) #32	ENSCGRG00001014492	1700011L22Rik (ENSCGRG00001015849)	Zfp827 (ENSCGRG00001020514) #33	Lsm6 (ENSCGRG00001017142) #34	Slc10a7 (ENSCGRG00001018803) #36	ENSCGRG00001013716	Pou4f2 (ENSCGRG00001001534)	Ttc29 (ENSCGRG00001003512)
Golden Hamster	MODERN SPECIES	692				Tecr (ENSMAUG00000016937)	Ndufb7 (ENSMAUG00000000462)	ENSMAUG00000011485	Clgn (ENSMAUG00000018981)	Mgat4d (ENSMAUG00000008813) #11	Elmod2 (ENSMAUG00000017426) #12	Ucp1 (ENSMAUG00000001700) #13	Tbc1d9 (ENSMAUG00000007342) #14	ENSMAUG00000000314 #16	ENSMAUG00000003125	Inpp4b (ENSMAUG00000006303) #18	Usp38 (ENSMAUG00000015498) #21	Gab1 (ENSMAUG00000009430) #22	Smarca5 (ENSMAUG00000015902) #24	Hhip (ENSMAUG00000012341) #27	ENSMAUG00000014510 #28	ENSMAUG00000006512 #29	Otud4 (ENSMAUG00000000475) #30	ENSMAUG00000020567	Smad1 (ENSMAUG00000020113) #31	Mmaa (ENSMAUG00000014130) #32	1700011L22Rik (ENSMAUG00000016201)	Zfp827 (ENSMAUG00000012963) #33	Lsm6 (ENSMAUG00000014938) #34	Slc10a7 (ENSMAUG00000019575) #36	ENSMAUG00000016659	Pou4f2 (ENSMAUG00000018882)	Ttc29 (ENSMAUG00000010655)
Cricetidae_B	ANCESTRAL SPECIES	5	ENSGT00940000160312	ENSGT00950000182886.a.a.b	ENSGT00390000018759	ENSGT00940000161377	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00390000011932 #36	ENSGT00940000153425.a.a.b.a	ENSGT00940000160339	ENSGT00390000008611	ENSGT01100000263512.a.a.b
Northern American deer mouse	MODERN SPECIES	18	Or10k2 (ENSPEMG00000027328)	Scoc (ENSPEMG00000024835)	Clgn (ENSPEMG00000023114)	Mgat4d (ENSPEMG00000022918) #11	Elmod2 (ENSPEMG00000028361) #12	Ucp1 (ENSPEMG00000022488) #13	ENSPEMG00000024217	Tbc1d9 (ENSPEMG00000024048) #14	ENSPEMG00000026256	ENSPEMG00000030162	Rnf150 (ENSPEMG00000008599) #15	Zfp330 (ENSPEMG00000022167) #16	Il15 (ENSPEMG00000029894) #17	Inpp4b (ENSPEMG00000005790) #18	Usp38 (ENSPEMG00000017993) #21	Gab1 (ENSPEMG00000011664) #22	Smarca5 (ENSPEMG00000008060) #24	Hhip (ENSPEMG00000020265) #27	ENSPEMG00000027237	Anapc10 (ENSPEMG00000020210) #28	ENSPEMG00000025681	Abce1 (ENSPEMG00000020086) #29	Otud4 (ENSPEMG00000000203) #30	Smad1 (ENSPEMG00000018411) #31	Mmaa (ENSPEMG00000017778) #32	1700011L22Rik (ENSPEMG00000017156)	Zfp827 (ENSPEMG00000014314) #33	Lsm6 (ENSPEMG00000012410) #34	Slc10a7 (ENSPEMG00000009109) #36	ENSPEMG00000006082	Pou4f2 (ENSPEMG00000027953)
Prairie vole	MODERN SPECIES	134			Tmem184c (ENSMOCG00000000751)	Scoc (ENSMOCG00000017671)	Clgn (ENSMOCG00000016553)	Mgat4d (ENSMOCG00000002514) #11	Elmod2 (ENSMOCG00000011005) #12	Ucp1 (ENSMOCG00000010167) #13	Tbc1d9 (ENSMOCG00000005207) #14	Rnf150 (ENSMOCG00000000137) #15	Zfp330 (ENSMOCG00000020520) #16	ENSMOCG00000013054	Inpp4b (ENSMOCG00000010527) #18	ENSMOCG00000003479	Usp38 (ENSMOCG00000000267) #21	Gab1 (ENSMOCG00000013817) #22
Murinae	ANCESTRAL SPECIES	15	ENSGT00950000182886.a.a.b	ENSGT00390000018759	ENSGT00940000161377	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00960000189829	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00390000011932 #36	ENSGT00940000153425.a.a.b.a	ENSGT00940000160339
Mus	ANCESTRAL SPECIES	6	ENSGT00390000018759	ENSGT00940000161377	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00860000135863	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00960000189829	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00390000011932 #36	ENSGT00940000153425.a.a.b.a	ENSGT00940000160339
Mus_A	ANCESTRAL SPECIES	8	ENSGT00390000018759	ENSGT00940000161377	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00860000135863	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00960000189829	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00390000011932 #36	ENSGT00940000153425.a.a.b.a	ENSGT00940000160339
Mus_B	ANCESTRAL SPECIES	6	ENSGT00390000018759	ENSGT00940000161377	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00860000135863	ENSGT00940000156171 #15	ENSGT00390000017043.j #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00960000189829	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00390000011932 #36	ENSGT00940000153425.a.a.b.a	ENSGT00940000160339
Mouse	MODERN SPECIES	17	Dnajb1 (ENSMUSG00000005483)	Tecr (ENSMUSG00000031708)	Ndufb7 (ENSMUSG00000033938)	Or10k2 (ENSMUSG00000047286)	Scoc (ENSMUSG00000063253)	Clgn (ENSMUSG00000002190)	Mgat4d (ENSMUSG00000035057) #11	Elmod2 (ENSMUSG00000035151) #12	Ucp1 (ENSMUSG00000031710) #13	Tbc1d9 (ENSMUSG00000031709) #14	Rnf150 (ENSMUSG00000047747) #15	Zfp330 (ENSMUSG00000031711) #16	Il15 (ENSMUSG00000031712) #17	Inpp4b (ENSMUSG00000037940) #18	Usp38 (ENSMUSG00000038250) #21	Gab1 (ENSMUSG00000031714) #22	Smarca5 (ENSMUSG00000031715) #24	Frem3 (ENSMUSG00000042353) #25	Gypa (ENSMUSG00000051839)	Hhip (ENSMUSG00000064325) #27	Anapc10 (ENSMUSG00000036977) #28	Abce1 (ENSMUSG00000058355) #29	Otud4 (ENSMUSG00000036990) #30	Smad1 (ENSMUSG00000031681) #31	Mmaa (ENSMUSG00000037022) #32	1700011L22Rik (ENSMUSG00000031682)	Zfp827 (ENSMUSG00000071064) #33	Lsm6 (ENSMUSG00000031683) #34	Slc10a7 (ENSMUSG00000031684) #36	Rbmxl1 (ENSMUSG00000037070)	Pou4f2 (ENSMUSG00000031688)
Mus_C	ANCESTRAL SPECIES	5	ENSGT00390000018759	ENSGT00940000161377	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00860000135863	ENSGT00940000156171 #15	ENSGT00390000017043.j #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00960000189829	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00390000011932 #36	ENSGT00940000153425.a.a.b.a	ENSGT00940000160339
Steppe mouse	MODERN SPECIES	3219												Il15 (ENSMSIG00000028262) #17	Inpp4b (ENSMSIG00000028134) #18	ENSMSIG00000028125	Usp38 (ENSMSIG00000028091) #21	Gab1 (ENSMSIG00000028070) #22	Smarca5 (ENSMSIG00000028055) #24	Frem3 (ENSMSIG00000028048) #25	Gypa (ENSMSIG00000028045)	ENSMSIG00000028035	ENSMSIG00000028033	Hhip (ENSMSIG00000028023) #27	Anapc10 (ENSMSIG00000028017) #28	Abce1 (ENSMSIG00000028007) #29	ENSMSIG00000028006	Otud4 (ENSMSIG00000027970) #30
spretus	MODERN SPECIES	17	Dnajb1 (MGP_SPRETEiJ_G0032392)	Tecr (MGP_SPRETEiJ_G0032391)	Ndufb7 (MGP_SPRETEiJ_G0032390)	Or10k2 (MGP_SPRETEiJ_G0032389)	Clgn (MGP_SPRETEiJ_G0032388)	Mgat4d (MGP_SPRETEiJ_G0032387) #11	Elmod2 (MGP_SPRETEiJ_G0032386) #12	Ucp1 (MGP_SPRETEiJ_G0032385) #13	Tbc1d9 (MGP_SPRETEiJ_G0032384) #14	MGP_SPRETEiJ_G0032383	Rnf150 (MGP_SPRETEiJ_G0032382) #15	MGP_SPRETEiJ_G0032381 #16	Il15 (MGP_SPRETEiJ_G0032380) #17	Inpp4b (MGP_SPRETEiJ_G0032379) #18	Usp38 (MGP_SPRETEiJ_G0032378) #21	Gab1 (MGP_SPRETEiJ_G0032377) #22	Smarca5 (MGP_SPRETEiJ_G0032376) #24	Frem3 (MGP_SPRETEiJ_G0032375) #25	Gypa (MGP_SPRETEiJ_G0032374)	Hhip (MGP_SPRETEiJ_G0032373) #27	Anapc10 (MGP_SPRETEiJ_G0032372) #28	Abce1 (MGP_SPRETEiJ_G0032371) #29	Otud4 (MGP_SPRETEiJ_G0032370) #30	Smad1 (MGP_SPRETEiJ_G0032369) #31	Mmaa (MGP_SPRETEiJ_G0032368) #32	1700011L22Rik (MGP_SPRETEiJ_G0032367)	MGP_SPRETEiJ_G0032366 #33	Lsm6 (MGP_SPRETEiJ_G0032365) #34	Slc10a7 (MGP_SPRETEiJ_G0032364) #36	Pou4f2 (MGP_SPRETEiJ_G0032363)	Ttc29 (MGP_SPRETEiJ_G0032362)
Ryukyu mouse	MODERN SPECIES	17	Tecr (MGP_CAROLIEiJ_G0031272)	Ndufb7 (MGP_CAROLIEiJ_G0031271)	Or10k2 (MGP_CAROLIEiJ_G0031270)	MGP_CAROLIEiJ_G0031269	MGP_CAROLIEiJ_G0031268	Mgat4d (MGP_CAROLIEiJ_G0031267) #11	Elmod2 (MGP_CAROLIEiJ_G0031266) #12	Ucp1 (MGP_CAROLIEiJ_G0031265) #13	Tbc1d9 (MGP_CAROLIEiJ_G0031264) #14	MGP_CAROLIEiJ_G0031263	Rnf150 (MGP_CAROLIEiJ_G0031262) #15	Zfp330 (MGP_CAROLIEiJ_G0031261) #16	Il15 (MGP_CAROLIEiJ_G0031260) #17	Inpp4b (MGP_CAROLIEiJ_G0031259) #18	Usp38 (MGP_CAROLIEiJ_G0031258) #21	Gab1 (MGP_CAROLIEiJ_G0031257) #22	MGP_CAROLIEiJ_G0031256 #24	Frem3 (MGP_CAROLIEiJ_G0031255) #25	Gypa (MGP_CAROLIEiJ_G0031254)	Hhip (MGP_CAROLIEiJ_G0031253) #27	Anapc10 (MGP_CAROLIEiJ_G0031252) #28	Abce1 (MGP_CAROLIEiJ_G0031251) #29	Otud4 (MGP_CAROLIEiJ_G0031250) #30	Smad1 (MGP_CAROLIEiJ_G0031249) #31	Mmaa (MGP_CAROLIEiJ_G0031248) #32	1700011L22Rik (MGP_CAROLIEiJ_G0031247)	MGP_CAROLIEiJ_G0031246 #33	Lsm6 (MGP_CAROLIEiJ_G0031245) #34	Slc10a7 (MGP_CAROLIEiJ_G0031244) #36	MGP_CAROLIEiJ_G0031243	Pou4f2 (MGP_CAROLIEiJ_G0031242)
Shrew mouse	MODERN SPECIES	12	Tecr (MGP_PahariEiJ_G0022878)	Ndufb7 (MGP_PahariEiJ_G0022877)	Or10k2 (MGP_PahariEiJ_G0022876)	MGP_PahariEiJ_G0022875	Clgn (MGP_PahariEiJ_G0022874)	Mgat4d (MGP_PahariEiJ_G0022873) #11	Elmod2 (MGP_PahariEiJ_G0022872) #12	Ucp1 (MGP_PahariEiJ_G0022871) #13	Tbc1d9 (MGP_PahariEiJ_G0022870) #14	MGP_PahariEiJ_G0022869	Rnf150 (MGP_PahariEiJ_G0022868) #15	Zfp330 (MGP_PahariEiJ_G0022867) #16	Il15 (MGP_PahariEiJ_G0022866) #17	Inpp4b (MGP_PahariEiJ_G0022865) #18	Usp38 (MGP_PahariEiJ_G0022864) #21	Gab1 (MGP_PahariEiJ_G0022863) #22	Smarca5 (MGP_PahariEiJ_G0022862) #24	MGP_PahariEiJ_G0022861 #25	Gypa (MGP_PahariEiJ_G0022860)	Hhip (MGP_PahariEiJ_G0022859) #27	Anapc10 (MGP_PahariEiJ_G0022858) #28	Abce1 (MGP_PahariEiJ_G0022857) #29	MGP_PahariEiJ_G0022856	Smad1 (MGP_PahariEiJ_G0022855) #31	Mmaa (MGP_PahariEiJ_G0022854) #32	1700011L22Rik (MGP_PahariEiJ_G0022853)	MGP_PahariEiJ_G0022852 #33	Lsm6 (MGP_PahariEiJ_G0022851) #34	Slc10a7 (MGP_PahariEiJ_G0022850) #36	MGP_PahariEiJ_G0022849	Pou4f2 (MGP_PahariEiJ_G0022848)
Rat	MODERN SPECIES	10	Tecr (ENSRNOG00000021808)	Ndufb7 (ENSRNOG00000028717)	Or10k2 (ENSRNOG00000028439)	Scoc (ENSRNOG00000003853)	Clgn (ENSRNOG00000003755)	Elmod2 (ENSRNOG00000028176) #12	Ucp1 (ENSRNOG00000003580) #13	Tbc1d9 (ENSRNOG00000003496) #14	Rnf150 (ENSRNOG00000003479) #15	Zfp330 (ENSRNOG00000003461) #16	LOC688712 (ENSRNOG00000033819)	Il15 (ENSRNOG00000003439) #17	Inpp4b (ENSRNOG00000018382) #18	AABR07043598.1 (ENSRNOG00000028320)	Usp38 (ENSRNOG00000026880) #21	Gab1 (ENSRNOG00000017879) #22	Smarca5 (ENSRNOG00000018149) #24	Frem3 (ENSRNOG00000039152) #25	ENSRNOG00000063111	Gypa (ENSRNOG00000062794)	Hhip (ENSRNOG00000018268) #27	Anapc10 (ENSRNOG00000018296) #28	Abce1 (ENSRNOG00000018345) #29	Otud4 (ENSRNOG00000018477) #30	Smad1 (ENSRNOG00000018483) #31	Mmaa (ENSRNOG00000011618) #32	LOC498933 (ENSRNOG00000011671)	Zfp827 (ENSRNOG00000011697) #33	Slc10a7 (ENSRNOG00000011991) #36	Rbmxl1 (ENSRNOG00000062375)	AABR07043626.1 (ENSRNOG00000033487)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1233	Mgst2 (ENSNGAG00000017878)	Maml3 (ENSNGAG00000020253)	Scoc (ENSNGAG00000011163)	Clgn (ENSNGAG00000013400)	Mgat4d (ENSNGAG00000019938) #11	Elmod2 (ENSNGAG00000001153) #12	Ucp1 (ENSNGAG00000003442) #13	Tbc1d9 (ENSNGAG00000007389) #14	Rnf150 (ENSNGAG00000018575) #15	ENSNGAG00000001858	Zfp330 (ENSNGAG00000004253) #16	ENSNGAG00000003516	Inpp4b (ENSNGAG00000004652) #18	ENSNGAG00000017839	Usp38 (ENSNGAG00000020013) #21	Gab1 (ENSNGAG00000015926) #22	Smarca5 (ENSNGAG00000000441) #24	ENSNGAG00000009664	Fstl5 (ENSNGAG00000018141)
Lesser Egyptian jerboa	MODERN SPECIES	57	Noct (ENSJJAG00000019776)	Elf2 (ENSJJAG00000001703)	Rab33b (ENSJJAG00000023756)	Setd7 (ENSJJAG00000006328)	Mgst2 (ENSJJAG00000009542)	Maml3 (ENSJJAG00000021946)	Mgat4d (ENSJJAG00000009209) #11	Elmod2 (ENSJJAG00000018795) #12	Ucp1 (ENSJJAG00000019452) #13	Tbc1d9 (ENSJJAG00000012857) #14	Rnf150 (ENSJJAG00000016691) #15	ENSJJAG00000023235 #16	Il15 (ENSJJAG00000000182) #17	Inpp4b (ENSJJAG00000011391) #18	ENSJJAG00000017034	Gab1 (ENSJJAG00000023862) #22	Smarca5 (ENSJJAG00000014965) #24	ENSJJAG00000016555	Ednra (ENSJJAG00000019465)	Ttc29 (ENSJJAG00000021357)	ENSJJAG00000020665	Pou4f2 (ENSJJAG00000022187)	Slc10a7 (ENSJJAG00000020694) #36	ENSJJAG00000013845 #34	ENSJJAG00000019609 #33	Mmaa (ENSJJAG00000012406) #32	ENSJJAG00000019141 #31	Otud4 (ENSJJAG00000011777) #30	Hhip (ENSJJAG00000012058) #27	Prmt9 (ENSJJAG00000022258)	Arhgap10 (ENSJJAG00000024127)
Kangaroo rat	MODERN SPECIES	438	Rab33b (ENSDORG00000023618)	Setd7 (ENSDORG00000004857)	Mgst2 (ENSDORG00000009124)	ENSDORG00000009125	Scoc (ENSDORG00000028512)	Clgn (ENSDORG00000000175)	Elmod2 (ENSDORG00000026741) #12	Ucp1 (ENSDORG00000001952) #13	Tbc1d9 (ENSDORG00000001961) #14	Rnf150 (ENSDORG00000012239) #15	Zfp330 (ENSDORG00000010322) #16	Il15 (ENSDORG00000014153) #17	Inpp4b (ENSDORG00000014154) #18	ENSDORG00000023817	Usp38 (ENSDORG00000004940) #21	Gab1 (ENSDORG00000015902) #22	Smarca5 (ENSDORG00000003466) #24	Hhip (ENSDORG00000016419) #27	ENSDORG00000016690 #28	Abce1 (ENSDORG00000016691) #29	Otud4 (ENSDORG00000016692) #30	Smad1 (ENSDORG00000008067) #31	ENSDORG00000008070 #32	Zfp827 (ENSDORG00000008073) #33	Lsm6 (ENSDORG00000000933) #34	Slc10a7 (ENSDORG00000001306) #36	Pou4f2 (ENSDORG00000004448)	Ttc29 (ENSDORG00000001176)	Ednra (ENSDORG00000014305)	ENSDORG00000028284	Prmt9 (ENSDORG00000010111)
Lagomorpha	ANCESTRAL SPECIES	69	ENSGT00950000183174.B.a	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339	ENSGT00390000008611	ENSGT01100000263512.a.a.b
Rabbit	MODERN SPECIES	6	ENSOCUG00000023227	ENSOCUG00000006591	CLGN (ENSOCUG00000006597)	MGAT4D (ENSOCUG00000006809) #11	ELMOD2 (ENSOCUG00000006810) #12	UCP1 (ENSOCUG00000002297) #13	TBC1D9 (ENSOCUG00000005559) #14	RNF150 (ENSOCUG00000013467) #15	ZNF330 (ENSOCUG00000014580) #16	ENSOCUG00000038390	IL15 (ENSOCUG00000008827) #17	ENSOCUG00000036398	INPP4B (ENSOCUG00000005896) #18	ENSOCUG00000033027	USP38 (ENSOCUG00000011524) #21	GAB1 (ENSOCUG00000003271) #22	SMARCA5 (ENSOCUG00000013042) #24	FREM3 (ENSOCUG00000017497) #25	ENSOCUG00000022208	ENSOCUG00000038022	ENSOCUG00000025017	ENSOCUG00000022002	HHIP (ENSOCUG00000004959) #27	ANAPC10 (ENSOCUG00000001819) #28	ENSOCUG00000001821 #29	OTUD4 (ENSOCUG00000014569) #30	SMAD1 (ENSOCUG00000017920) #31	MMAA (ENSOCUG00000016139) #32	ZNF827 (ENSOCUG00000002055) #33	LSM6 (ENSOCUG00000017495) #34	REELD1 (ENSOCUG00000034608) #35
Pika	MODERN SPECIES	165																GAB1 (ENSOPRG00000015330) #22
Tree shrew	MODERN SPECIES	295																GAB1 (ENSTBEG00000005121) #22	ENSTBEG00000006048
Primates	ANCESTRAL SPECIES	10	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00910000148499	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339
Haplorrhini	ANCESTRAL SPECIES	20	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00910000148499	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339
Simiiformes	ANCESTRAL SPECIES	10	ENSGT00910000146867	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00910000148499	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339
Catarrhini	ANCESTRAL SPECIES	14	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000007888.c.b.g.b	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00910000148499	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000005727.a.b.a.a.d	ENSGT00390000013722 #28	ENSGT00390000015089.c #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00390000008403.z	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35
Hominoidea	ANCESTRAL SPECIES	10	ENSGT00910000146867	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000007888.c.b.g.b	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000005727.a.b.a.a.d	ENSGT00390000013722.m.a #28	ENSGT00390000015089.c #29	ENSGT00940000160512.a #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00390000008403.z	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35
Hominidae	ANCESTRAL SPECIES	12	ENSGT00910000146867	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000007888.c.b.g.b	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000005727.a.b.a.a.d	ENSGT00390000013722.m.a #28	ENSGT00390000015089.c #29	ENSGT00940000160512.a #30	ENSGT00940000154391.a.a #31	ENSGT00390000008403.z	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	11	ENSGT00910000146867	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000007888.c.b.g.b	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214.b	ENSGT00550000075214.a	ENSGT00940000158660 #27	ENSGT00390000005727.a.b.a.a.d	ENSGT00390000013722.m.a #28	ENSGT00390000015089.c.c #29	ENSGT00940000160512.a #30	ENSGT00940000154391.a.a #31	ENSGT00390000008403.z	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34
Homo/Pan group	ANCESTRAL SPECIES	10	ENSGT00910000146867	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000007888.c.b.g.b	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214.b.b	ENSGT00550000075214.b.a	ENSGT00550000075214.a	ENSGT00940000158660 #27	ENSGT00390000005727.a.b.a.a.d	ENSGT00390000013722.m.a #28	ENSGT00390000015089.c.c #29	ENSGT00940000160512.a #30	ENSGT00940000154391.a.a #31	ENSGT00390000008403.z	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33
Pan	ANCESTRAL SPECIES	7	ENSGT00910000146867	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000007888.c.b.g.b	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214.b.b	ENSGT00550000075214.b.a	ENSGT00550000075214.a.a	ENSGT00940000158660 #27	ENSGT00390000005727.a.b.a.a.d	ENSGT00390000013722.m.a #28	ENSGT00390000015089.c.c #29	ENSGT00940000160512.a #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00390000008403.z	ENSGT00520000060562	ENSGT00940000156063 #33
Chimpanzee	MODERN SPECIES	17	ENSPTRG00000051753	MGST2 (ENSPTRG00000016457)	MAML3 (ENSPTRG00000016459)	SCOC (ENSPTRG00000016460)	ENSPTRG00000045152	CLGN (ENSPTRG00000049174)	MGAT4D (ENSPTRG00000031089) #11	ELMOD2 (ENSPTRG00000016462) #12	UCP1 (ENSPTRG00000016463) #13	TBC1D9 (ENSPTRG00000016464) #14	RNF150 (ENSPTRG00000016465) #15	ZNF330 (ENSPTRG00000016466) #16	IL15 (ENSPTRG00000016467) #17	INPP4B (ENSPTRG00000016469) #18	USP38 (ENSPTRG00000016470) #21	GAB1 (ENSPTRG00000016471) #22	ENSPTRG00000044130	SMARCA5 (ENSPTRG00000016472) #24	FREM3 (ENSPTRG00000016474) #25	ENSPTRG00000038865	ENSPTRG00000046937	ENSPTRG00000034083	ENSPTRG00000047026	GYPA (ENSPTRG00000016478)	HHIP (ENSPTRG00000016479) #27	ANAPC10 (ENSPTRG00000016480) #28	ABCE1 (ENSPTRG00000016481) #29	OTUD4 (ENSPTRG00000016482) #30	ENSPTRG00000041132	SMAD1 (ENSPTRG00000016485) #31	MMAA (ENSPTRG00000016486) #32
Bonobo	MODERN SPECIES	17	MGST2 (ENSPPAG00000034504)	MAML3 (ENSPPAG00000002376)	ENSPPAG00000042997	ENSPPAG00000033463	CLGN (ENSPPAG00000040396)	MGAT4D (ENSPPAG00000036062) #11	ELMOD2 (ENSPPAG00000042771) #12	UCP1 (ENSPPAG00000027664) #13	TBC1D9 (ENSPPAG00000029993) #14	RNF150 (ENSPPAG00000032316) #15	ZNF330 (ENSPPAG00000040018) #16	IL15 (ENSPPAG00000043501) #17	ENSPPAG00000041816	INPP4B (ENSPPAG00000042739) #18	USP38 (ENSPPAG00000041444) #21	GAB1 (ENSPPAG00000039393) #22	ENSPPAG00000039385	SMARCA5 (ENSPPAG00000028523) #24	FREM3 (ENSPPAG00000029454) #25	GYPB (ENSPPAG00000042513)	GYPA (ENSPPAG00000042526)	HHIP (ENSPPAG00000032784) #27	ENSPPAG00000034777	ANAPC10 (ENSPPAG00000034191) #28	ABCE1 (ENSPPAG00000011660) #29	OTUD4 (ENSPPAG00000025977) #30	ENSPPAG00000027561	SMAD1 (ENSPPAG00000027603) #31	MMAA (ENSPPAG00000031747) #32	ENSPPAG00000023693	C4orf51 (ENSPPAG00000040867)
Human	MODERN SPECIES	16	RAB33B (ENSG00000172007)	SETD7 (ENSG00000145391)	MGST2 (ENSG00000085871)	MAML3 (ENSG00000196782)	SCOC (ENSG00000153130)	CLGN (ENSG00000153132)	MGAT4D (ENSG00000205301) #11	ELMOD2 (ENSG00000179387) #12	UCP1 (ENSG00000109424) #13	TBC1D9 (ENSG00000109436) #14	RNF150 (ENSG00000170153) #15	ZNF330 (ENSG00000109445) #16	IL15 (ENSG00000164136) #17	INPP4B (ENSG00000109452) #18	USP38 (ENSG00000170185) #21	GAB1 (ENSG00000109458) #22	SMARCA5 (ENSG00000153147) #24	FREM3 (ENSG00000183090) #25	GYPE (ENSG00000197465)	GYPB (ENSG00000250361)	GYPA (ENSG00000170180)	HHIP (ENSG00000164161) #27	ANAPC10 (ENSG00000164162) #28	ABCE1 (ENSG00000164163) #29	OTUD4 (ENSG00000164164) #30	SMAD1 (ENSG00000170365) #31	MMAA (ENSG00000151611) #32	C4orf51 (ENSG00000237136)	ZNF827 (ENSG00000151612) #33	LSM6 (ENSG00000164167) #34	REELD1 (ENSG00000250673) #35
Gorilla	MODERN SPECIES	17	ENSGGOG00000044183	ENSGGOG00000040366	MGST2 (ENSGGOG00000004989)	ENSGGOG00000010453	ENSGGOG00000028186	CLGN (ENSGGOG00000006153)	MGAT4D (ENSGGOG00000027687) #11	ELMOD2 (ENSGGOG00000024299) #12	UCP1 (ENSGGOG00000023085) #13	TBC1D9 (ENSGGOG00000006878) #14	RNF150 (ENSGGOG00000023601) #15	ZNF330 (ENSGGOG00000006078) #16	IL15 (ENSGGOG00000011285) #17	INPP4B (ENSGGOG00000027193) #18	USP38 (ENSGGOG00000002044) #21	GAB1 (ENSGGOG00000000020) #22	SMARCA5 (ENSGGOG00000012595) #24	FREM3 (ENSGGOG00000008352) #25	GYPA (ENSGGOG00000015552)	HHIP (ENSGGOG00000013359) #27	ENSGGOG00000038059	ANAPC10 (ENSGGOG00000025091) #28	ABCE1 (ENSGGOG00000022726) #29	ENSGGOG00000002462 #30	SMAD1 (ENSGGOG00000022121) #31	MMAA (ENSGGOG00000002558) #32	C4orf51 (ENSGGOG00000038659)	ZNF827 (ENSGGOG00000004696) #33	LSM6 (ENSGGOG00000001310) #34	REELD1 (ENSGGOG00000043474) #35	ENSGGOG00000034808 #36
Orangutan	MODERN SPECIES	17	SETD7 (ENSPPYG00000015073)	ENSPPYG00000038857	MGST2 (ENSPPYG00000015074)	MAML3 (ENSPPYG00000015075)	ENSPPYG00000033334	CLGN (ENSPPYG00000015078)	MGAT4D (ENSPPYG00000015079) #11	ELMOD2 (ENSPPYG00000015080) #12	UCP1 (ENSPPYG00000015081) #13	TBC1D9 (ENSPPYG00000015082) #14	RNF150 (ENSPPYG00000015083) #15	ZNF330 (ENSPPYG00000015084) #16	IL15 (ENSPPYG00000015085) #17	INPP4B (ENSPPYG00000015086) #18	USP38 (ENSPPYG00000015088) #21	GAB1 (ENSPPYG00000015090) #22	SMARCA5 (ENSPPYG00000015091) #24	FREM3 (ENSPPYG00000015093) #25	ENSPPYG00000015094	HHIP (ENSPPYG00000015095) #27	ANAPC10 (ENSPPYG00000037049) #28	ABCE1 (ENSPPYG00000015097) #29	OTUD4 (ENSPPYG00000015098) #30	ENSPPYG00000038758	SMAD1 (ENSPPYG00000038063) #31	MMAA (ENSPPYG00000015103) #32	C4orf51 (ENSPPYG00000032371)	ENSPPYG00000015104 #33	LSM6 (ENSPPYG00000031358) #34	REELD1 (ENSPPYG00000038439) #35	SLC10A7 (ENSPPYG00000015106) #36
Gibbon	MODERN SPECIES	22	MGST2 (ENSNLEG00000005071)	ENSNLEG00000029158	MAML3 (ENSNLEG00000005077)	ENSNLEG00000034591	ENSNLEG00000028161	ENSNLEG00000033539	CLGN (ENSNLEG00000005101)	ELMOD2 (ENSNLEG00000005149) #12	UCP1 (ENSNLEG00000005170) #13	TBC1D9 (ENSNLEG00000005185) #14	RNF150 (ENSNLEG00000005230) #15	ZNF330 (ENSNLEG00000033135) #16	IL15 (ENSNLEG00000005257) #17	INPP4B (ENSNLEG00000005284) #18	USP38 (ENSNLEG00000005343) #21	GAB1 (ENSNLEG00000005366) #22	SMARCA5 (ENSNLEG00000005383) #24	FREM3 (ENSNLEG00000005425) #25	ENSNLEG00000032234	HHIP (ENSNLEG00000005430) #27	ANAPC10 (ENSNLEG00000005453) #28	ENSNLEG00000005460 #29	OTUD4 (ENSNLEG00000005494) #30	SMAD1 (ENSNLEG00000005537) #31	MMAA (ENSNLEG00000032493) #32	ENSNLEG00000029298	ENSNLEG00000018924	C4orf51 (ENSNLEG00000005557)	ZNF827 (ENSNLEG00000005560) #33	LSM6 (ENSNLEG00000005584) #34	REELD1 (ENSNLEG00000035386) #35
Cercopithecidae	ANCESTRAL SPECIES	10	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000007888.c.b.g.b	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00910000148499	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000005727.a.b.a.a.d	ENSGT00390000013722 #28	ENSGT00390000015089.c #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00390000008403.z	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978.i.b #34	ENSGT00940000163277 #35
Cercopithecinae	ANCESTRAL SPECIES	14	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000007888.c.b.g.b	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00910000148499	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000005727.a.b.a.a.d	ENSGT00390000013722 #28	ENSGT00390000015089.c #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00390000008403.z	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978.i.b #34	ENSGT00940000163277 #35
Cercopithecinae_a	ANCESTRAL SPECIES	13	ENSGT00950000183201.b.b.a	ENSGT00390000007888.c.b.g.b	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00910000148499	ENSGT00940000157878 #14	ENSGT00390000003582.f.c	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000005727.a.b.a.a.d	ENSGT00390000013722 #28	ENSGT00390000015089.c #29	ENSGT00940000160512 #30	ENSGT00390000002615.o.b	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00390000008403.z	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978.i.b #34
Macaca	ANCESTRAL SPECIES	18	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00910000148499	ENSGT00940000157878 #14	ENSGT00390000003582.f.c	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00390000001958.t.a.h	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089.c #29	ENSGT00940000160512 #30	ENSGT00390000002615.o.b	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00390000008403.z	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978.i.b #34
Pig-tailed macaque	MODERN SPECIES	201	MGST2 (ENSMNEG00000035368)	MAML3 (ENSMNEG00000040179)	SCOC (ENSMNEG00000045271)	CLGN (ENSMNEG00000026848)	MGAT4D (ENSMNEG00000031956) #11	ELMOD2 (ENSMNEG00000000643) #12	UCP1 (ENSMNEG00000034442) #13	ENSMNEG00000037749	TBC1D9 (ENSMNEG00000041392) #14	ENSMNEG00000036378	RNF150 (ENSMNEG00000042816) #15	ZNF330 (ENSMNEG00000034157) #16	IL15 (ENSMNEG00000040041) #17	INPP4B (ENSMNEG00000033774) #18	USP38 (ENSMNEG00000034149) #21	GAB1 (ENSMNEG00000032328) #22	SMARCA5 (ENSMNEG00000031916) #24
Macaca_a	ANCESTRAL SPECIES	12	ENSGT00910000146867	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00390000003582.e.c.c.b	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00390000001958.t.a.h	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089.c #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000161627.a.a.a.a.b.a.a.a.b.c.b.b	ENSGT00940000154978.i.b #34	ENSGT00940000163277 #35
Crab-eating macaque	MODERN SPECIES	15	ENSMFAG00000058013	ENSMFAG00000001579	CLGN (ENSMFAG00000044499)	MGAT4D (ENSMFAG00000036899) #11	ENSMFAG00000052917 #12	ELMOD2 (ENSMFAG00000046408) #12	UCP1 (ENSMFAG00000043786) #13	TBC1D9 (ENSMFAG00000046063) #14	ENSMFAG00000051743	RNF150 (ENSMFAG00000041541) #15	ZNF330 (ENSMFAG00000030809) #16	IL15 (ENSMFAG00000043515) #17	INPP4B (ENSMFAG00000004754) #18	ENSMFAG00000048249	USP38 (ENSMFAG00000031506) #21	GAB1 (ENSMFAG00000044011) #22	SMARCA5 (ENSMFAG00000043649) #24	FREM3 (ENSMFAG00000038207) #25	ENSMFAG00000003962	HHIP (ENSMFAG00000040378) #27	ENSMFAG00000053399	ANAPC10 (ENSMFAG00000001142) #28	ABCE1 (ENSMFAG00000038310) #29	OTUD4 (ENSMFAG00000045984) #30	ENSMFAG00000058203	SMAD1 (ENSMFAG00000037774) #31	MMAA (ENSMFAG00000032212) #32	ENSMFAG00000050038	C4orf51 (ENSMFAG00000062382)	ZNF827 (ENSMFAG00000038497) #33	ENSMFAG00000065069
Rhesus	MODERN SPECIES	15	MGST2 (ENSMMUG00000021999)	MAML3 (ENSMMUG00000021998)	ENSMMUG00000063075	ENSMMUG00000053045	CLGN (ENSMMUG00000022355)	MGAT4D (ENSMMUG00000030139) #11	ELMOD2 (ENSMMUG00000015242) #12	UCP1 (ENSMMUG00000015244) #13	TBC1D9 (ENSMMUG00000015246) #14	ENSMMUG00000054844	RNF150 (ENSMMUG00000010444) #15	ZNF330 (ENSMMUG00000060157) #16	IL15 (ENSMMUG00000019092) #17	INPP4B (ENSMMUG00000003697) #18	USP38 (ENSMMUG00000000827) #21	GAB1 (ENSMMUG00000000828) #22	SMARCA5 (ENSMMUG00000000829) #24	FREM3 (ENSMMUG00000003319) #25	ENSMMUG00000044429	ENSMMUG00000014173	HHIP (ENSMMUG00000007968) #27	ANAPC10 (ENSMMUG00000004432) #28	ABCE1 (ENSMMUG00000004433) #29	OTUD4 (ENSMMUG00000004437) #30	ENSMMUG00000064578	SMAD1 (ENSMMUG00000018384) #31	MMAA (ENSMMUG00000005382) #32	C5H4orf51 (ENSMMUG00000039875)	ZNF827 (ENSMMUG00000005380) #33	ENSMMUG00000050323	LSM6 (ENSMMUG00000057637) #34
Cercopithecinae_b	ANCESTRAL SPECIES	6	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000007888.c.b.g.b	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00390000003582.f.c	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000005727.a.b.a.a.d	ENSGT00390000013722 #28	ENSGT00390000015089.c #29	ENSGT00940000160512 #30	ENSGT00390000002615.o.b	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978.i.b #34	ENSGT00940000163277 #35
Cercopithecinae_d	ANCESTRAL SPECIES	21	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000007888.c.b.g.b	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00390000003582.f.c	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000005727.a.b.a.a.d	ENSGT00390000013722 #28	ENSGT00390000015089.c #29	ENSGT00940000160512 #30	ENSGT00390000002615.o.b	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978.i.b #34	ENSGT00940000163277 #35
Drill	MODERN SPECIES	945															USP38 (ENSMLEG00000035914) #21	GAB1 (ENSMLEG00000032401) #22	SMARCA5 (ENSMLEG00000042393) #24	FREM3 (ENSMLEG00000029008) #25	ENSMLEG00000029837	HHIP (ENSMLEG00000029460) #27	ENSMLEG00000036343	ANAPC10 (ENSMLEG00000041302) #28	ABCE1 (ENSMLEG00000038260) #29	OTUD4 (ENSMLEG00000019778) #30	ENSMLEG00000029260	SMAD1 (ENSMLEG00000033974) #31	MMAA (ENSMLEG00000025474) #32	C4orf51 (ENSMLEG00000037874)	ZNF827 (ENSMLEG00000032085) #33	LSM6 (ENSMLEG00000035153) #34	REELD1 (ENSMLEG00000039176) #35
Sooty mangabey	MODERN SPECIES	575	MGST2 (ENSCATG00000044814)	MAML3 (ENSCATG00000029477)	ENSCATG00000035949	SCOC (ENSCATG00000045036)	CLGN (ENSCATG00000034016)	MGAT4D (ENSCATG00000030864) #11	ELMOD2 (ENSCATG00000028878) #12	UCP1 (ENSCATG00000039147) #13	TBC1D9 (ENSCATG00000027992) #14	ENSCATG00000033922	RNF150 (ENSCATG00000036670) #15	ZNF330 (ENSCATG00000035879) #16	IL15 (ENSCATG00000042052) #17	INPP4B (ENSCATG00000042835) #18	USP38 (ENSCATG00000040394) #21	GAB1 (ENSCATG00000018732) #22	SMARCA5 (ENSCATG00000044917) #24	FREM3 (ENSCATG00000039679) #25	ENSCATG00000036237	HHIP (ENSCATG00000035139) #27	ENSCATG00000034430	ANAPC10 (ENSCATG00000038918) #28	ABCE1 (ENSCATG00000036545) #29	OTUD4 (ENSCATG00000030428) #30	ENSCATG00000044949	SMAD1 (ENSCATG00000040644) #31	MMAA (ENSCATG00000031114) #32	C4orf51 (ENSCATG00000019996)	ZNF827 (ENSCATG00000042669) #33	ENSCATG00000016631	LSM6 (ENSCATG00000002770) #34
Olive baboon	MODERN SPECIES	13	MGST2 (ENSPANG00000012875)	MAML3 (ENSPANG00000023379)	ENSPANG00000047009	SCOC (ENSPANG00000033516)	CLGN (ENSPANG00000012438)	MGAT4D (ENSPANG00000021633) #11	ELMOD2 (ENSPANG00000022482) #12	UCP1 (ENSPANG00000019036) #13	TBC1D9 (ENSPANG00000016781) #14	ENSPANG00000030921	RNF150 (ENSPANG00000009678) #15	ZNF330 (ENSPANG00000039505) #16	IL15 (ENSPANG00000009677) #17	INPP4B (ENSPANG00000009842) #18	USP38 (ENSPANG00000008197) #21	GAB1 (ENSPANG00000009676) #22	SMARCA5 (ENSPANG00000001175) #24	FREM3 (ENSPANG00000006696) #25	ENSPANG00000021918	ENSPANG00000044664	ENSPANG00000046087	ENSPANG00000045820	HHIP (ENSPANG00000012434) #27	ENSPANG00000048321	ANAPC10 (ENSPANG00000004188) #28	ABCE1 (ENSPANG00000005888) #29	OTUD4 (ENSPANG00000002435) #30	ENSPANG00000038099	SMAD1 (ENSPANG00000016688) #31	MMAA (ENSPANG00000010647) #32	C4orf51 (ENSPANG00000020589)
Vervet Monkey	MODERN SPECIES	26	NAA15 (ENSCSAG00000003534)	RAB33B (ENSCSAG00000003531)	SETD7 (ENSCSAG00000003529)	MGST2 (ENSCSAG00000003527)	MAML3 (ENSCSAG00000003524)	CLGN (ENSCSAG00000003520)	MGAT4D (ENSCSAG00000003516) #11	ELMOD2 (ENSCSAG00000003509) #12	UCP1 (ENSCSAG00000003508) #13	TBC1D9 (ENSCSAG00000003505) #14	ENSCSAG00000000390	ZNF330 (ENSCSAG00000003500) #16	IL15 (ENSCSAG00000003496) #17	INPP4B (ENSCSAG00000003489) #18	USP38 (ENSCSAG00000003455) #21	GAB1 (ENSCSAG00000003452) #22	SMARCA5 (ENSCSAG00000003448) #24	FREM3 (ENSCSAG00000003444) #25	ENSCSAG00000003442	HHIP (ENSCSAG00000003439) #27	ANAPC10 (ENSCSAG00000003438) #28	ABCE1 (ENSCSAG00000003437) #29	OTUD4 (ENSCSAG00000003435) #30	SMAD1 (ENSCSAG00000003430) #31	MMAA (ENSCSAG00000003428) #32	C4orf51 (ENSCSAG00000003424)	ZNF827 (ENSCSAG00000003422) #33	LSM6 (ENSCSAG00000003421) #34	ENSCSAG00000003416	SLC10A7 (ENSCSAG00000003414) #36	POU4F2 (ENSCSAG00000003411)
Rhinopithecus	ANCESTRAL SPECIES	628															ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00910000147797	ENSGT01090000260070.A
Golden snub-nosed monkey	MODERN SPECIES	3122															USP38 (ENSRROG00000036566) #21	GAB1 (ENSRROG00000030069) #22	SMARCA5 (ENSRROG00000029591) #24	ENSRROG00000039590	ENSRROG00000030176
Black snub-nosed monkey	MODERN SPECIES	1727															USP38 (ENSRBIG00000034798) #21	GAB1 (ENSRBIG00000039258) #22	SMARCA5 (ENSRBIG00000044644) #24	FREM3 (ENSRBIG00000043128) #25	ENSRBIG00000035543	ENSRBIG00000013183	ENSRBIG00000036198	ENSRBIG00000013900
Platyrrhini	ANCESTRAL SPECIES	5	ENSGT00910000146867	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00830000128422.b	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722.`b.a #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978.h.b #34	ENSGT00940000154978.h.a #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36
Cebidae	ANCESTRAL SPECIES	4	ENSGT00910000146867	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00830000128422.b	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722.`b.a #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978.h.b #34	ENSGT00940000154978.h.a #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36
Marmoset	MODERN SPECIES	15	ENSCJAG00000039765 #11	ELMOD2 (ENSCJAG00000003032) #12	UCP1 (ENSCJAG00000003017) #13	TBC1D9 (ENSCJAG00000002968) #14	RNF150 (ENSCJAG00000002960) #15	ZNF330 (ENSCJAG00000002931) #16	ENSCJAG00000069761	IL15 (ENSCJAG00000002909) #17	ENSCJAG00000065977	INPP4B (ENSCJAG00000002842) #18	ENSCJAG00000080009	ENSCJAG00000071544	USP38 (ENSCJAG00000002831) #21	ENSCJAG00000064145	ENSCJAG00000085872	GAB1 (ENSCJAG00000002803) #22	SMARCA5 (ENSCJAG00000002735) #24	FREM3 (ENSCJAG00000002729) #25	ENSCJAG00000086880	ENSCJAG00000002707	HHIP (ENSCJAG00000002666) #27	ENSCJAG00000085953	ANAPC10 (ENSCJAG00000002663) #28	ABCE1 (ENSCJAG00000002636) #29	OTUD4 (ENSCJAG00000002563) #30	ENSCJAG00000068375	ENSCJAG00000071603	SMAD1 (ENSCJAG00000002542) #31	ENSCJAG00000054004	ENSCJAG00000053976	MMAA (ENSCJAG00000002525) #32
Cebidae_a	ANCESTRAL SPECIES	49	ENSGT00910000146867	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00830000128422.b	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722.`b.a #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978.g #34	ENSGT00940000154978.h.a #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36
Bolivian squirrel monkey	MODERN SPECIES	68	ENSSBOG00000028958	MGST2 (ENSSBOG00000022825)	MAML3 (ENSSBOG00000035958)	SCOC (ENSSBOG00000029458)	CLGN (ENSSBOG00000030802)	MGAT4D (ENSSBOG00000028510) #11	ELMOD2 (ENSSBOG00000021628) #12	UCP1 (ENSSBOG00000026412) #13	TBC1D9 (ENSSBOG00000033747) #14	RNF150 (ENSSBOG00000021561) #15	ZNF330 (ENSSBOG00000033260) #16	IL15 (ENSSBOG00000023289) #17	INPP4B (ENSSBOG00000026274) #18	ENSSBOG00000029349	USP38 (ENSSBOG00000029166) #21	GAB1 (ENSSBOG00000036042) #22	SMARCA5 (ENSSBOG00000036257) #24	FREM3 (ENSSBOG00000024738) #25	ENSSBOG00000031076	HHIP (ENSSBOG00000031611) #27	ANAPC10 (ENSSBOG00000028340) #28	ABCE1 (ENSSBOG00000026731) #29	OTUD4 (ENSSBOG00000026181) #30	SMAD1 (ENSSBOG00000032640) #31	MMAA (ENSSBOG00000024471) #32	C4orf51 (ENSSBOG00000033422)	ZNF827 (ENSSBOG00000021214) #33	ENSSBOG00000020157	ENSSBOG00000021229 #34	REELD1 (ENSSBOG00000016008) #35	SLC10A7 (ENSSBOG00000026776) #36
Capuchin	MODERN SPECIES	4	ENSCCAG00000020402	SCOC (ENSCCAG00000037302)	CLGN (ENSCCAG00000019261)	MGAT4D (ENSCCAG00000030185) #11	ELMOD2 (ENSCCAG00000028648) #12	UCP1 (ENSCCAG00000037986) #13	TBC1D9 (ENSCCAG00000032177) #14	RNF150 (ENSCCAG00000020786) #15	ZNF330 (ENSCCAG00000028900) #16	IL15 (ENSCCAG00000034837) #17	INPP4B (ENSCCAG00000036276) #18	ENSCCAG00000017228	ENSCCAG00000031159	USP38 (ENSCCAG00000036444) #21	ENSCCAG00000017579	GAB1 (ENSCCAG00000027991) #22	SMARCA5 (ENSCCAG00000027215) #24	FREM3 (ENSCCAG00000027764) #25	ENSCCAG00000035001	HHIP (ENSCCAG00000026649) #27	ANAPC10 (ENSCCAG00000022970) #28	ENSCCAG00000021838	ABCE1 (ENSCCAG00000022952) #29	OTUD4 (ENSCCAG00000019901) #30	ENSCCAG00000035581	SMAD1 (ENSCCAG00000031698) #31	MMAA (ENSCCAG00000016061) #32	C4orf51 (ENSCCAG00000028054)	ZNF827 (ENSCCAG00000029509) #33	LSM6 (ENSCCAG00000036437) #34	REELD1 (ENSCCAG00000022602) #35
Mas night monkey	MODERN SPECIES	1091											IL15 (ENSANAG00000022052) #17	INPP4B (ENSANAG00000026584) #18	ENSANAG00000022060	ENSANAG00000022956	USP38 (ENSANAG00000027226) #21	GAB1 (ENSANAG00000029852) #22	SMARCA5 (ENSANAG00000019345) #24	ENSANAG00000030304	HHIP (ENSANAG00000029482) #27	ENSANAG00000033809 #28	ENSANAG00000023180 #29	OTUD4 (ENSANAG00000025997) #30	SMAD1 (ENSANAG00000035908) #31	MMAA (ENSANAG00000027872) #32	C4orf51 (ENSANAG00000025562)	ZNF827 (ENSANAG00000030225) #33	ENSANAG00000030568 #34	REELD1 (ENSANAG00000025603) #35	SLC10A7 (ENSANAG00000025194) #36	POU4F2 (ENSANAG00000032317)	TTC29 (ENSANAG00000035099)
Tarsier	MODERN SPECIES	3963																GAB1 (ENSTSYG00000007295) #22
Strepsirrhini	ANCESTRAL SPECIES	32	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00910000148499	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339
Lemuriformes	ANCESTRAL SPECIES	38	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00910000148499	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978.n #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339
Mouse lemur	MODERN SPECIES	5	MGST2 (ENSMICG00000007060)	MAML3 (ENSMICG00000033333)	SCOC (ENSMICG00000007077)	CLGN (ENSMICG00000007083)	MGAT4D (ENSMICG00000003973) #11	ELMOD2 (ENSMICG00000030808) #12	UCP1 (ENSMICG00000008999) #13	ENSMICG00000034102	TBC1D9 (ENSMICG00000009012) #14	RNF150 (ENSMICG00000009057) #15	ENSMICG00000044516	ZNF330 (ENSMICG00000027897) #16	IL15 (ENSMICG00000003154) #17	INPP4B (ENSMICG00000006762) #18	USP38 (ENSMICG00000035652) #21	GAB1 (ENSMICG00000009956) #22	SMARCA5 (ENSMICG00000003971) #24	FREM3 (ENSMICG00000046112) #25	ENSMICG00000033671	HHIP (ENSMICG00000003993) #27	ANAPC10 (ENSMICG00000048106) #28	ABCE1 (ENSMICG00000015343) #29	OTUD4 (ENSMICG00000031430) #30	SMAD1 (ENSMICG00000000562) #31	MMAA (ENSMICG00000000564) #32	C4orf51 (ENSMICG00000045099)	ZNF827 (ENSMICG00000000567) #33	LSM6 (ENSMICG00000042599) #34	REELD1 (ENSMICG00000043534) #35	SLC10A7 (ENSMICG00000000572) #36	POU4F2 (ENSMICG00000034755)
Lemuriformes_a	ANCESTRAL SPECIES	61	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00910000148499	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978.n #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339
Greater bamboo lemur	MODERN SPECIES	559													IL15 (ENSPSMG00000016752) #17	INPP4B (ENSPSMG00000016845) #18	USP38 (ENSPSMG00000016880) #21	GAB1 (ENSPSMG00000016944) #22	SMARCA5 (ENSPSMG00000017072) #24	FREM3 (ENSPSMG00000017259) #25	ENSPSMG00000017284	HHIP (ENSPSMG00000017317) #27	ANAPC10 (ENSPSMG00000017344) #28	ABCE1 (ENSPSMG00000017393) #29	OTUD4 (ENSPSMG00000017444) #30	SMAD1 (ENSPSMG00000017518) #31	MMAA (ENSPSMG00000017593) #32	C4orf51 (ENSPSMG00000017600)	ZNF827 (ENSPSMG00000017648) #33
Coquerels sifaka	MODERN SPECIES	267			ADGRE2 (ENSPCOG00000027244)	ZNF333 (ENSPCOG00000016442)	ADGRE3 (ENSPCOG00000014538)	ENSPCOG00000014152	ENSPCOG00000024825	NDUFB7 (ENSPCOG00000024695)	TECR (ENSPCOG00000023638)	RNF150 (ENSPCOG00000016876) #15	ZNF330 (ENSPCOG00000019805) #16	IL15 (ENSPCOG00000020910) #17	INPP4B (ENSPCOG00000015413) #18	ENSPCOG00000013141 #18	USP38 (ENSPCOG00000027643) #21	GAB1 (ENSPCOG00000018531) #22	SMARCA5 (ENSPCOG00000026744) #24	FREM3 (ENSPCOG00000028758) #25	ENSPCOG00000020754	HHIP (ENSPCOG00000019323) #27	ANAPC10 (ENSPCOG00000019031) #28	ABCE1 (ENSPCOG00000028022) #29	OTUD4 (ENSPCOG00000024062) #30
Bushbaby	MODERN SPECIES	156	SETD7 (ENSOGAG00000012216)	MGST2 (ENSOGAG00000006051)	MAML3 (ENSOGAG00000033459)	SCOC (ENSOGAG00000026414)	CLGN (ENSOGAG00000012402)	ELMOD2 (ENSOGAG00000006803) #12	UCP1 (ENSOGAG00000006807) #13	TBC1D9 (ENSOGAG00000006809) #14	ENSOGAG00000027660	RNF150 (ENSOGAG00000006816) #15	ZNF330 (ENSOGAG00000011993) #16	IL15 (ENSOGAG00000011090) #17	ENSOGAG00000011094 #18	ENSOGAG00000031567 #18	USP38 (ENSOGAG00000003985) #21	GAB1 (ENSOGAG00000003737) #22	SMARCA5 (ENSOGAG00000009702) #24	FREM3 (ENSOGAG00000030589) #25	HHIP (ENSOGAG00000006900) #27	ANAPC10 (ENSOGAG00000006902) #28	ABCE1 (ENSOGAG00000006906) #29	OTUD4 (ENSOGAG00000006907) #30	SMAD1 (ENSOGAG00000000150) #31	MMAA (ENSOGAG00000012507) #32	ZNF827 (ENSOGAG00000005635) #33	ENSOGAG00000026665 #34	SLC10A7 (ENSOGAG00000008690) #36	POU4F2 (ENSOGAG00000028626)	TTC29 (ENSOGAG00000010351)	EDNRA (ENSOGAG00000015817)	TMEM184C (ENSOGAG00000015819)
Laurasiatheria	ANCESTRAL SPECIES	11	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00910000148499	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00950000186280	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000156801 #22
Hedgehog	MODERN SPECIES	1211																GAB1 (ENSEEUG00000006825) #22
Laurasiatheria_a	ANCESTRAL SPECIES	8	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00910000148499	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00960000189829	ENSGT00950000186280	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339
Laurasiatheria_b	ANCESTRAL SPECIES	8	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00950000186280	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339
Carnivora	ANCESTRAL SPECIES	5	ENSGT00940000157090	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339
Caniformia	ANCESTRAL SPECIES	7	ENSGT00940000157090	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339
Caniformia_b	ANCESTRAL SPECIES	5	ENSGT00940000157090	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339
Mustelinae	ANCESTRAL SPECIES	82	ENSGT00390000004380	ENSGT00940000158238	ENSGT00530000063668.B	ENSGT00510000049722	ENSGT00940000158614	ENSGT00940000158299	ENSGT00940000157269.a.a	ENSGT00940000160868	ENSGT01030000234597.a.b.a	ENSGT00390000000378.d.b.db.b	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b.q.b	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00960000188301	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339
Ferret	MODERN SPECIES	369	CLU (ENSMPUG00000000903)	ENSMPUG00000000883	EPHX2 (ENSMPUG00000000882)	CHRNA2 (ENSMPUG00000000876)	PTK2B (ENSMPUG00000000875)	TRIM35 (ENSMPUG00000000873)	ENSMPUG00000000872	STMN4 (ENSMPUG00000000871)	ENSMPUG00000000868	ADRA1A (ENSMPUG00000000865)	DPYSL2 (ENSMPUG00000000862)	ENSMPUG00000018484	PNMA2 (ENSMPUG00000018482)	ENSMPUG00000000829	USP38 (ENSMPUG00000000827) #21	GAB1 (ENSMPUG00000000823) #22
American mink	MODERN SPECIES	197										ENSNVIG00000007896	ADRA1A (ENSNVIG00000007921)	DPYSL2 (ENSNVIG00000007952)	PNMA2 (ENSNVIG00000008000)	ENSNVIG00000008003	UBP38 (ENSNVIG00000008015) #21	GAB1 (ENSNVIG00000008071) #22	SMARCA5 (ENSNVIG00000008216) #24	FREM3 (ENSNVIG00000008272) #25	ENSNVIG00000008308	HHIP (ENSNVIG00000008323) #27	D6RA92 (ENSNVIG00000008368) #28	ABCE1 (ENSNVIG00000008435) #29	OTUD4 (ENSNVIG00000008469) #30	SMAD1 (ENSNVIG00000008529) #31	MMAA (ENSNVIG00000008585) #32	C4orf51 (ENSNVIG00000008623)	ZNF827 (ENSNVIG00000008646) #33	ENSNVIG00000008816 #34	REELD1 (ENSNVIG00000008846) #35	NTCP7 (ENSNVIG00000008869) #36	POU4F2 (ENSNVIG00000008980)
Ursidae	ANCESTRAL SPECIES	17	ENSGT00940000157090	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339
Ursus	ANCESTRAL SPECIES	68	ENSGT00950000183174.B.a	ENSGT00940000157090	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00390000008611	ENSGT01100000263512.a.a.b
American black bear	MODERN SPECIES	1800															USP38 (ENSUAMG00000023510) #21	GAB1 (ENSUAMG00000023502) #22	SMARCA5 (ENSUAMG00000023495) #24
Polar bear	MODERN SPECIES	122	RAB33B (ENSUMAG00000014975)	SETD7 (ENSUMAG00000014983)	MGST2 (ENSUMAG00000014995)	ENSUMAG00000015003	CLGN (ENSUMAG00000015013)	MGAT4D (ENSUMAG00000015104) #11	ELMOD2 (ENSUMAG00000015111) #12	UCP1 (ENSUMAG00000015121) #13	TBC1D9 (ENSUMAG00000015143) #14	RNF150 (ENSUMAG00000015188) #15	ZNF330 (ENSUMAG00000015225) #16	IL15 (ENSUMAG00000015241) #17	INPP4B (ENSUMAG00000015269) #18	ENSUMAG00000015290 #21	ENSUMAG00000015293 #21	GAB1 (ENSUMAG00000015305) #22	SMARCA5 (ENSUMAG00000015324) #24	FREM3 (ENSUMAG00000015339) #25	ENSUMAG00000015349	HHIP (ENSUMAG00000015358) #27	ANAPC10 (ENSUMAG00000015370) #28	ABCE1 (ENSUMAG00000015377) #29	OTUD4 (ENSUMAG00000015403) #30	SMAD1 (ENSUMAG00000015575) #31	MMAA (ENSUMAG00000015592) #32	ZNF827 (ENSUMAG00000015618) #33	LSM6 (ENSUMAG00000015727) #34	REELD1 (ENSUMAG00000015729) #35	SLC10A7 (ENSUMAG00000015740) #36	TTC29 (ENSUMAG00000015756)	EDNRA (ENSUMAG00000015775)
Giant Panda	MODERN SPECIES	15	RAB33B (ENSAMEG00000025425)	SETD7 (ENSAMEG00000010974)	MGST2 (ENSAMEG00000010971)	MAML3 (ENSAMEG00000010963)	ENSAMEG00000010957	CLGN (ENSAMEG00000010915)	MGAT4D (ENSAMEG00000029626) #11	ELMOD2 (ENSAMEG00000002850) #12	UCP1 (ENSAMEG00000002869) #13	TBC1D9 (ENSAMEG00000002883) #14	RNF150 (ENSAMEG00000002953) #15	ZNF330 (ENSAMEG00000002960) #16	IL15 (ENSAMEG00000008060) #17	INPP4B (ENSAMEG00000008050) #18	USP38 (ENSAMEG00000009698) #21	GAB1 (ENSAMEG00000009676) #22	SMARCA5 (ENSAMEG00000009585) #24	FREM3 (ENSAMEG00000016565) #25	ENSAMEG00000024386	HHIP (ENSAMEG00000016574) #27	ANAPC10 (ENSAMEG00000016589) #28	ABCE1 (ENSAMEG00000016596) #29	OTUD4 (ENSAMEG00000016621) #30	ENSAMEG00000019876	SMAD1 (ENSAMEG00000016645) #31	MMAA (ENSAMEG00000016655) #32	C4orf51 (ENSAMEG00000024155)	ZNF827 (ENSAMEG00000016667) #33	LSM6 (ENSAMEG00000016671) #34	REELD1 (ENSAMEG00000028424) #35	SLC10A7 (ENSAMEG00000016674) #36
Canidae	ANCESTRAL SPECIES	61	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828.l	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000012647.b	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00950000185087	ENSGT00940000158403 #21	ENSGT00940000156801 #22
Canis_lupus	ANCESTRAL SPECIES	48	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828.l	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000012647.b	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22
Dingo	MODERN SPECIES	120	ENSCAFG00020020876	ENSCAFG00020020879	ENSCAFG00020020881	CLGN (ENSCAFG00020020884)	MGAT4D (ENSCAFG00020020893) #11	ELMOD2 (ENSCAFG00020020899) #12	UCP1 (ENSCAFG00020020904) #13	TBC1D9 (ENSCAFG00020020922) #14	RNF150 (ENSCAFG00020020931) #15	ZNF330 (ENSCAFG00020020936) #16	ENSCAFG00020020939	IL15 (ENSCAFG00020020943) #17	INPP4B (ENSCAFG00020020999) #18	ENSCAFG00020021166	USP38 (ENSCAFG00020021169) #21	GAB1 (ENSCAFG00020021176) #22
Dog	MODERN SPECIES	10	MGST2 (ENSCAFG00845021915)	MAML3 (ENSCAFG00845021815)	SCOC (ENSCAFG00845021519)	CLGN (ENSCAFG00845021226)	MGAT4D (ENSCAFG00845020851) #11	ELMOD2 (ENSCAFG00845020750) #12	UCP1 (ENSCAFG00845020627) #13	TBC1D9 (ENSCAFG00845020204) #14	RNF150 (ENSCAFG00845019931) #15	ZNF330 (ENSCAFG00845019797) #16	ENSCAFG00845019765	IL15 (ENSCAFG00845019627) #17	INPP4B (ENSCAFG00845019237) #18	ENSCAFG00845019092	USP38 (ENSCAFG00845018979) #21	GAB1 (ENSCAFG00845018786) #22
Red fox	MODERN SPECIES	270														ENSVVUG00000008095	USP38 (ENSVVUG00000008134) #21	GAB1 (ENSVVUG00000008140) #22
Felidae	ANCESTRAL SPECIES	4	ENSGT00940000157090	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00960000188301	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339
Panthera	ANCESTRAL SPECIES	5	ENSGT00940000157090	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00960000188301	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339
Tiger	MODERN SPECIES	367	RAB33B (ENSPTIG00000007518)	SETD7 (ENSPTIG00000007276)	MGST2 (ENSPTIG00000007125)	ENSPTIG00000010071	SCOC (ENSPTIG00000006565)	CLGN (ENSPTIG00000006432)	MGAT4D (ENSPTIG00000005940) #11	ELMOD2 (ENSPTIG00000005825) #12	UCP1 (ENSPTIG00000005728) #13	TBC1D9 (ENSPTIG00000005564) #14	RNF150 (ENSPTIG00000005145) #15	ZNF330 (ENSPTIG00000004314) #16	IL15 (ENSPTIG00000001825) #17	INPP4B (ENSPTIG00000000345) #18	USP38 (ENSPTIG00000021206) #21	GAB1 (ENSPTIG00000021050) #22	SMARCA5 (ENSPTIG00000020959) #24	FREM3 (ENSPTIG00000020850) #25	ENSPTIG00000020826	HHIP (ENSPTIG00000020696) #27	ENSPTIG00000020677 #28	ENSPTIG00000020565 #28	ABCE1 (ENSPTIG00000020422) #29	OTUD4 (ENSPTIG00000020267) #30	SMAD1 (ENSPTIG00000020242) #31	MMAA (ENSPTIG00000020116) #32	C4orf51 (ENSPTIG00000019914)	ZNF827 (ENSPTIG00000019818) #33	LSM6 (ENSPTIG00000019769) #34	REELD1 (ENSPTIG00000019736) #35	SLC10A7 (ENSPTIG00000018877) #36
Panthera_a	ANCESTRAL SPECIES	2	ENSGT00940000157090	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00960000188301	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339
leopard	MODERN SPECIES	3	RAB33B (ENSPPRG00000006119)	SETD7 (ENSPPRG00000005792)	MGST2 (ENSPPRG00000004911)	MAML3 (ENSPPRG00000003719)	ENSPPRG00000002856	CLGN (ENSPPRG00000001604)	MGAT4D (ENSPPRG00000001104) #11	ELMOD2 (ENSPPRG00000000147) #12	UCP1 (ENSPPRG00000022839) #13	TBC1D9 (ENSPPRG00000022937) #14	RNF150 (ENSPPRG00000023447) #15	ZNF330 (ENSPPRG00000015737) #16	IL15 (ENSPPRG00000012086) #17	INPP4B (ENSPPRG00000009054) #18	USP38 (ENSPPRG00000006892) #21	GAB1 (ENSPPRG00000005605) #22	SMARCA5 (ENSPPRG00000004925) #24	FREM3 (ENSPPRG00000002995) #25	ENSPPRG00000017780	ENSPPRG00000002255	HHIP (ENSPPRG00000001593) #27	ANAPC10 (ENSPPRG00000000631) #28	ABCE1 (ENSPPRG00000022963) #29	OTUD4 (ENSPPRG00000023451) #30	SMAD1 (ENSPPRG00000024576) #31	MMAA (ENSPPRG00000018308) #32	C4orf51 (ENSPPRG00000014494)	ZNF827 (ENSPPRG00000013768) #33	LSM6 (ENSPPRG00000012806) #34	REELD1 (ENSPPRG00000012290) #35	SLC10A7 (ENSPPRG00000011455) #36
lion	MODERN SPECIES	4	ENSPLOG00000007887	SETD7 (ENSPLOG00000007858)	MGST2 (ENSPLOG00000007800)	MAML3 (ENSPLOG00000007702)	ENSPLOG00000007535	CLGN (ENSPLOG00000014259)	MGAT4D (ENSPLOG00000014004) #11	ELMOD2 (ENSPLOG00000013886) #12	UCP1 (ENSPLOG00000013796) #13	TBC1D9 (ENSPLOG00000013580) #14	RNF150 (ENSPLOG00000013378) #15	ZNF330 (ENSPLOG00000013327) #16	IL15 (ENSPLOG00000013278) #17	INPP4B (ENSPLOG00000013206) #18	USP38 (ENSPLOG00000013115) #21	GAB1 (ENSPLOG00000012927) #22	SMARCA5 (ENSPLOG00000012828) #24	FREM3 (ENSPLOG00000012733) #25	ENSPLOG00000012702	HHIP (ENSPLOG00000012505) #27	ANAPC10 (ENSPLOG00000012426) #28	ABCE1 (ENSPLOG00000012370) #29	OTUD4 (ENSPLOG00000012289) #30	SMAD1 (ENSPLOG00000012243) #31	MMAA (ENSPLOG00000012175) #32	C4orf51 (ENSPLOG00000012109)	ZNF827 (ENSPLOG00000011513) #33	LSM6 (ENSPLOG00000011387) #34	REELD1 (ENSPLOG00000011324) #35	SLC10A7 (ENSPLOG00000011188) #36	POU4F2 (ENSPLOG00000011107)
Cat	MODERN SPECIES	235	SETD7 (ENSFCAG00000015075)	MGST2 (ENSFCAG00000028794)	MAML3 (ENSFCAG00000036439)	ENSFCAG00000045955	CLGN (ENSFCAG00000018363)	MGAT4D (ENSFCAG00000025557) #11	ELMOD2 (ENSFCAG00000030559) #12	UCP1 (ENSFCAG00000008906) #13	TBC1D9 (ENSFCAG00000000874) #14	RNF150 (ENSFCAG00000033343) #15	ZNF330 (ENSFCAG00000025166) #16	IL15 (ENSFCAG00000030158) #17	INPP4B (ENSFCAG00000026268) #18	ENSFCAG00000049302	USP38 (ENSFCAG00000024468) #21	GAB1 (ENSFCAG00000027102) #22	SMARCA5 (ENSFCAG00000004544) #24	FREM3 (ENSFCAG00000022741) #25	ENSFCAG00000048627	ENSFCAG00000041204	HHIP (ENSFCAG00000018108) #27	ANAPC10 (ENSFCAG00000030108) #28	ABCE1 (ENSFCAG00000030441) #29	OTUD4 (ENSFCAG00000022224) #30	SMAD1 (ENSFCAG00000004136) #31	MMAA (ENSFCAG00000030592) #32	C4orf51 (ENSFCAG00000045664)	ZNF827 (ENSFCAG00000004139) #33	LSM6 (ENSFCAG00000003047) #34	REELD1 (ENSFCAG00000046759) #35	ENSFCAG00000028577
Laurasiatheria_c	ANCESTRAL SPECIES	8	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00950000186280	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339
Equus	ANCESTRAL SPECIES	24	ENSGT00390000004827	ENSGT00940000160288.d	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00950000186280	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000170855	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36
Donkey	MODERN SPECIES	22	SETD7 (ENSEASG00005007862)	ENSEASG00005007860	MAML3 (ENSEASG00005007858)	ENSEASG00005033815	CLGN (ENSEASG00005007852)	MGAT4D (ENSEASG00005007849) #11	ELMOD2 (ENSEASG00005007845) #12	UCP1 (ENSEASG00005007842) #13	TBC1D9 (ENSEASG00005007836) #14	RNF150 (ENSEASG00005007830) #15	ZNF330 (ENSEASG00005007822) #16	IL15 (ENSEASG00005036963) #17	ENSEASG00005007814	INPP4B (ENSEASG00005007803) #18	USP38 (ENSEASG00005005319) #21	GAB1 (ENSEASG00005005314) #22	SMARCA5 (ENSEASG00005001866) #24	ENSEASG00005027902	HHIP (ENSEASG00005001609) #27	ANAPC10 (ENSEASG00005036814) #28	ABCE1 (ENSEASG00005001594) #29	OTUD4 (ENSEASG00005001588) #30	ENSEASG00005001582	SMAD1 (ENSEASG00005001575) #31	MMAA (ENSEASG00005001563) #32	C4orf51 (ENSEASG00005027855)	ZNF827 (ENSEASG00005001543) #33	LSM6 (ENSEASG00005001533) #34	REELD1 (ENSEASG00005001529) #35	SLC10A7 (ENSEASG00005001510) #36	POU4F2 (ENSEASG00005001506)
Horse	MODERN SPECIES	11	ENSECAG00000030092	ENSECAG00000047277	CLGN (ENSECAG00000017686)	MGAT4D (ENSECAG00000017651) #11	ELMOD2 (ENSECAG00000017466) #12	UCP1 (ENSECAG00000026962) #13	TBC1D9 (ENSECAG00000015440) #14	ENSECAG00000049272	RNF150 (ENSECAG00000015385) #15	ZNF330 (ENSECAG00000014441) #16	IL15 (ENSECAG00000014406) #17	INPP4B (ENSECAG00000010327) #18	ENSECAG00000054413	USP38 (ENSECAG00000009333) #21	ENSECAG00000059675	GAB1 (ENSECAG00000008570) #22	SMARCA5 (ENSECAG00000002676) #24	FREM3 (ENSECAG00000024518) #25	ENSECAG00000024514	HHIP (ENSECAG00000024485) #27	ENSECAG00000044723	ANAPC10 (ENSECAG00000024416) #28	ABCE1 (ENSECAG00000023648) #29	OTUD4 (ENSECAG00000023403) #30	ENSECAG00000053592	ENSECAG00000050002	SMAD1 (ENSECAG00000022649) #31	MMAA (ENSECAG00000021810) #32	ENSECAG00000058529 #32	C4orf51 (ENSECAG00000034055)	ZNF827 (ENSECAG00000021655) #33
Chiroptera	ANCESTRAL SPECIES	36	ENSGT00940000157090	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00390000011932 #36	ENSGT00940000160339	ENSGT00390000008611	ENSGT01100000263512.a.a.b	ENSGT00940000155201
Megabat	MODERN SPECIES	3966																GAB1 (ENSPVAG00000006481) #22	SMARCA5 (ENSPVAG00000006482) #24
Microchiroptera	ANCESTRAL SPECIES	38	ENSGT00940000157090	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00390000011932 #36	ENSGT00940000160339	ENSGT00390000008611	ENSGT01100000263512.a.a.b	ENSGT00940000155201
Greater horseshoe bat	MODERN SPECIES	9	SETD7 (ENSRFEG00010012204)	MGST2 (ENSRFEG00010012252)	MAML3 (ENSRFEG00010012335)	SCOC (ENSRFEG00010012423)	ENSRFEG00010012509	MGAT4D (ENSRFEG00010012579) #11	ELMOD2 (ENSRFEG00010012962) #12	UCP1 (ENSRFEG00010013035) #13	TBC1D9 (ENSRFEG00010013080) #14	RNF150 (ENSRFEG00010013446) #15	ZNF330 (ENSRFEG00010013528) #16	IL15 (ENSRFEG00010013629) #17	INPP4B (ENSRFEG00010013805) #18	USP38 (ENSRFEG00010013936) #21	ENSRFEG00010014017	GAB1 (ENSRFEG00010014081) #22	SMARCA5 (ENSRFEG00010014236) #24	ENSRFEG00010014311	HHIP (ENSRFEG00010014382) #27	ENSRFEG00010014457 #28	ABCE1 (ENSRFEG00010014545) #29	OTUD4 (ENSRFEG00010014600) #30	SMAD1 (ENSRFEG00010014733) #31	MMAA (ENSRFEG00010014780) #32	C4orf51 (ENSRFEG00010014824)	ZNF827 (ENSRFEG00010014952) #33	LSM6 (ENSRFEG00010015332) #34	SLC10A7 (ENSRFEG00010015418) #36	POU4F2 (ENSRFEG00010015642)	TTC29 (ENSRFEG00010015692)	EDNRA (ENSRFEG00010016295)
Microbat	MODERN SPECIES	938	MAML3 (ENSMLUG00000008845)	SCOC (ENSMLUG00000014087)	CLGN (ENSMLUG00000014092)	MGAT4D (ENSMLUG00000009542) #11	ELMOD2 (ENSMLUG00000009559) #12	UCP1 (ENSMLUG00000009574) #13	TBC1D9 (ENSMLUG00000009598) #14	ENSMLUG00000029642	RNF150 (ENSMLUG00000009658) #15	ZNF330 (ENSMLUG00000009684) #16	IL15 (ENSMLUG00000007618) #17	ENSMLUG00000017627 #18	ENSMLUG00000027792 #18	USP38 (ENSMLUG00000013423) #21	ENSMLUG00000029899	GAB1 (ENSMLUG00000000457) #22	SMARCA5 (ENSMLUG00000000468) #24	HHIP (ENSMLUG00000009326) #27	ANAPC10 (ENSMLUG00000008607) #28	ABCE1 (ENSMLUG00000008618) #29	OTUD4 (ENSMLUG00000008637) #30	SMAD1 (ENSMLUG00000012261) #31	MMAA (ENSMLUG00000008078) #32	ZNF827 (ENSMLUG00000008100) #33	LSM6 (ENSMLUG00000026355) #34	ENSMLUG00000022646 #36	ENSMLUG00000015165 #36	POU4F2 (ENSMLUG00000015174)	TTC29 (ENSMLUG00000015176)	EDNRA (ENSMLUG00000002880)	TMEM184C (ENSMLUG00000014055)
Artiodactyla	ANCESTRAL SPECIES	12	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00910000148499	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00960000189829	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339	ENSGT00390000008611
Suina	ANCESTRAL SPECIES	22	ENSGT00950000183174.B.a	ENSGT00940000157090	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339	ENSGT00390000008611
Pig	MODERN SPECIES	16	RAB33B (ENSSSCG00000020711)	SETD7 (ENSSSCG00000030396)	MGST2 (ENSSSCG00000031736)	ENSSSCG00000046543	MAML3 (ENSSSCG00000009060)	SCOC (ENSSSCG00000038550)	CLGN (ENSSSCG00000026360)	MGAT4D (ENSSSCG00000038236) #11	ELMOD2 (ENSSSCG00000009055) #12	TBC1D9 (ENSSSCG00000032741) #14	RNF150 (ENSSSCG00000009053) #15	ZNF330 (ENSSSCG00000009052) #16	IL15 (ENSSSCG00000009051) #17	INPP4B (ENSSSCG00000009050) #18	USP38 (ENSSSCG00000009049) #21	GAB1 (ENSSSCG00000009048) #22	SMARCA5 (ENSSSCG00000009047) #24	ENSSSCG00000009046	HHIP (ENSSSCG00000009045) #27	ANAPC10 (ENSSSCG00000033871) #28	ABCE1 (ENSSSCG00000009043) #29	OTUD4 (ENSSSCG00000009042) #30	SMAD1 (ENSSSCG00000009040) #31	MMAA (ENSSSCG00000009039) #32	C4orf51 (ENSSSCG00000042317)	ZNF827 (ENSSSCG00000009037) #33	LSM6 (ENSSSCG00000035973) #34	REELD1 (ENSSSCG00000041625) #35	ENSSSCG00000048545	SLC10A7 (ENSSSCG00000009035) #36	POU4F2 (ENSSSCG00000026015)
Chacoan peccary	MODERN SPECIES	120	NAA15 (ENSCWAG00000021191)	RAB33B (ENSCWAG00000021204)	SETD7 (ENSCWAG00000021207)	MGST2 (ENSCWAG00000021227)	MAML3 (ENSCWAG00000021238)	SCOC (ENSCWAG00000021260)	CLGN (ENSCWAG00000021275)	MGAT4D (ENSCWAG00000007811) #11	ELMOD2 (ENSCWAG00000008046) #12	TBC1D9 (ENSCWAG00000008142) #14	RNF150 (ENSCWAG00000008342) #15	ZNF330 (ENSCWAG00000008534) #16	IL15 (ENSCWAG00000008557) #17	INPP4B (ENSCWAG00000008695) #18	USP38 (ENSCWAG00000009147) #21	GAB1 (ENSCWAG00000009243) #22	SMARCA5 (ENSCWAG00000009513) #24	ENSCWAG00000009655	HHIP (ENSCWAG00000009710) #27	ANAPC10 (ENSCWAG00000009870) #28	ABCE1 (ENSCWAG00000009941) #29	OTUD4 (ENSCWAG00000010007) #30	SMAD1 (ENSCWAG00000010148) #31	MMAA (ENSCWAG00000010198) #32	C4orf51 (ENSCWAG00000010248)	ZNF827 (ENSCWAG00000010322) #33	LSM6 (ENSCWAG00000010564) #34	REELD1 (ENSCWAG00000010608) #35	SLC10A7 (ENSCWAG00000010694) #36	POU4F2 (ENSCWAG00000011402)	TTC29 (ENSCWAG00000011446)
Artiodactyla_a	ANCESTRAL SPECIES	12	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00910000148499	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00960000189829	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339	ENSGT00390000008611
Artiodactyla_b	ANCESTRAL SPECIES	16	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00960000189829	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339	ENSGT00390000008611
Cetacea	ANCESTRAL SPECIES	12	ENSGT00950000182864.a.b.b.a.b.a.a.b	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00990000212162	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339	ENSGT00390000008611
Odontoceti	ANCESTRAL SPECIES	11	ENSGT00390000016928	ENSGT00950000182864.a.b.b.a.b.a.a.b	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00990000212162	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339	ENSGT00390000008611
Odontoceti_a	ANCESTRAL SPECIES	26	ENSGT00940000156660	ENSGT00390000016928	ENSGT00950000182864.a.b.b.a.b.a.a.b	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000156589 #12	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00990000212162	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339	ENSGT00390000008611
Dolphin	MODERN SPECIES	1811															USP38 (ENSTTRG00000002912) #21	GAB1 (ENSTTRG00000002914) #22	SMARCA5 (ENSTTRG00000002915) #24
Odontoceti_b	ANCESTRAL SPECIES	11	ENSGT00940000156660	ENSGT00390000016928	ENSGT00950000182864.a.b.b.a.b.a.a.b	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000156589 #12	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00990000212162	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339	ENSGT00390000008611
Monodontidae	ANCESTRAL SPECIES	9	ENSGT00940000156660	ENSGT00390000016928	ENSGT00950000182864.a.b.b.a.b.a.a.b	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000156589 #12	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00990000212162	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339	ENSGT00390000008611
Narwhal	MODERN SPECIES	307	WFS1 (ENSMMNG00015012919)	PPP2R2C (ENSMMNG00015012939)	SETD7 (ENSMMNG00015012957)	MGST2 (ENSMMNG00015013012)	MAML3 (ENSMMNG00015013033)	SCOC (ENSMMNG00015013055)	CLGN (ENSMMNG00015013069)	ELMOD2 (ENSMMNG00015013079) #12	TBC1D9 (ENSMMNG00015013089) #14	ENSMMNG00015013116	RNF150 (ENSMMNG00015015631) #15	ZNF330 (ENSMMNG00015015654) #16	IL15 (ENSMMNG00015015698) #17	INPP4B (ENSMMNG00015015936) #18	USP38 (ENSMMNG00015016230) #21	GAB1 (ENSMMNG00015016325) #22	SMARCA5 (ENSMMNG00015016399) #24	ENSMMNG00015016476	HHIP (ENSMMNG00015016532) #27	ENSMMNG00015016565 #28	ABCE1 (ENSMMNG00015016581) #29	OTUD4 (ENSMMNG00015016633) #30	SMAD1 (ENSMMNG00015016702) #31	MMAA (ENSMMNG00015016739) #32	C4orf51 (ENSMMNG00015016781)	ZNF827 (ENSMMNG00015016835) #33	REELD1 (ENSMMNG00015016914) #35	SLC10A7 (ENSMMNG00015016983) #36	POU4F2 (ENSMMNG00015017044)	TTC29 (ENSMMNG00015017062)	EDNRA (ENSMMNG00015017085)
Beluga whale	MODERN SPECIES	53										ENSDLEG00000007660 #15	ENSDLEG00000007657	ZNF330 (ENSDLEG00000007642) #16	IL15 (ENSDLEG00000007616) #17	INPP4B (ENSDLEG00000016217) #18	USP38 (ENSDLEG00000016185) #21	GAB1 (ENSDLEG00000016168) #22	SMARCA5 (ENSDLEG00000016112) #24	HHIP (ENSDLEG00000016095) #27	ANAPC10 (ENSDLEG00000016085) #28	ABCE1 (ENSDLEG00000016059) #29	OTUD4 (ENSDLEG00000016002) #30	SMAD1 (ENSDLEG00000015975) #31	MMAA (ENSDLEG00000015945) #32	ZNF827 (ENSDLEG00000015910) #33	LSM6 (ENSDLEG00000015899) #34	REELD1 (ENSDLEG00000015878) #35	SLC10A7 (ENSDLEG00000015846) #36	POU4F2 (ENSDLEG00000015837)	TTC29 (ENSDLEG00000015814)	EDNRA (ENSDLEG00000015808)	ENSDLEG00000015796
Vaquita	MODERN SPECIES	16	WFS1 (ENSPSNG00000016467)	PPP2R2C (ENSPSNG00000016392)	SETD7 (ENSPSNG00000016301)	ENSPSNG00000016177	ENSPSNG00000016125	MAML3 (ENSPSNG00000016048)	SCOC (ENSPSNG00000015865)	CLGN (ENSPSNG00000015754)	ELMOD2 (ENSPSNG00000015677) #12	TBC1D9 (ENSPSNG00000015613) #14	RNF150 (ENSPSNG00000015526) #15	ZNF330 (ENSPSNG00000015475) #16	IL15 (ENSPSNG00000015292) #17	INPP4B (ENSPSNG00000015200) #18	USP38 (ENSPSNG00000015085) #21	GAB1 (ENSPSNG00000014895) #22	SMARCA5 (ENSPSNG00000014782) #24	ENSPSNG00000014681	HHIP (ENSPSNG00000014618) #27	ENSPSNG00000014531 #28	ABCE1 (ENSPSNG00000014453) #29	OTUD4 (ENSPSNG00000014326) #30	SMAD1 (ENSPSNG00000014264) #31	MMAA (ENSPSNG00000014172) #32	ZNF827 (ENSPSNG00000013982) #33	LSM6 (ENSPSNG00000013905) #34	SLC10A7 (ENSPSNG00000013581) #36	POU4F2 (ENSPSNG00000013436)	TTC29 (ENSPSNG00000013058)	EDNRA (ENSPSNG00000012879)	TMEM184C (ENSPSNG00000012807)
Sperm whale	MODERN SPECIES	18	SETD7 (ENSPCTG00005000966)	ENSPCTG00005000987	ENSPCTG00005000996	MAML3 (ENSPCTG00005001012)	ENSPCTG00005001027	ENSPCTG00005001047	CLGN (ENSPCTG00005001074)	ELMOD2 (ENSPCTG00005001098) #12	ENSPCTG00005001118 #13	TBC1D9 (ENSPCTG00005001153) #14	RNF150 (ENSPCTG00005001237) #15	ZNF330 (ENSPCTG00005001281) #16	IL15 (ENSPCTG00005001318) #17	INPP4B (ENSPCTG00005001389) #18	USP38 (ENSPCTG00005001450) #21	GAB1 (ENSPCTG00005001490) #22	SMARCA5 (ENSPCTG00005001535) #24	ENSPCTG00005001593	HHIP (ENSPCTG00005001627) #27	ANAPC10 (ENSPCTG00005001660) #28	ABCE1 (ENSPCTG00005001679) #29	OTUD4 (ENSPCTG00005001708) #30	SMAD1 (ENSPCTG00005001735) #31	MMAA (ENSPCTG00005001755) #32	ZNF827 (ENSPCTG00005001804) #33	LSM6 (ENSPCTG00005001901) #34	SLC10A7 (ENSPCTG00005001951) #36	POU4F2 (ENSPCTG00005002032)	TTC29 (ENSPCTG00005002054)	ENSPCTG00005002142	EDNRA (ENSPCTG00005002154)
Blue whale	MODERN SPECIES	16	MGST2 (ENSBMSG00010001835)	MAML3 (ENSBMSG00010001847)	ENSBMSG00010001855	SCOC (ENSBMSG00010001913)	CLGN (ENSBMSG00010001947)	MGAT4D (ENSBMSG00010001980) #11	ELMOD2 (ENSBMSG00010002040) #12	TBC1D9 (ENSBMSG00010002068) #14	RNF150 (ENSBMSG00010002115) #15	ZNF330 (ENSBMSG00010002166) #16	ENSBMSG00010002175	IL15 (ENSBMSG00010002198) #17	INPP4B (ENSBMSG00010002249) #18	ENSBMSG00010002305	USP38 (ENSBMSG00010002350) #21	GAB1 (ENSBMSG00010002430) #22	SMARCA5 (ENSBMSG00010002485) #24	ENSBMSG00010002557	HHIP (ENSBMSG00010002579) #27	ENSBMSG00010002597 #28	ABCE1 (ENSBMSG00010002608) #29	OTUD4 (ENSBMSG00010002625) #30	SMAD1 (ENSBMSG00010002652) #31	MMAA (ENSBMSG00010002665) #32	C4orf51 (ENSBMSG00010002687)	ZNF827 (ENSBMSG00010002746) #33	LSM6 (ENSBMSG00010003073) #34	REELD1 (ENSBMSG00010003085) #35	SLC10A7 (ENSBMSG00010003119) #36	POU4F2 (ENSBMSG00010003153)	TTC29 (ENSBMSG00010003177)
Pecora	ANCESTRAL SPECIES	14	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00960000189829	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339	ENSGT00390000008611
Percora_a	ANCESTRAL SPECIES	17	ENSGT00960000186868	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00960000189829	ENSGT00940000158403 #21	ENSGT00950000186340	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339	ENSGT00390000008611
Bovidae	ANCESTRAL SPECIES	17	ENSGT00960000186868	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00960000189829	ENSGT00940000158403 #21	ENSGT00950000186340	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339	ENSGT00390000008611
Caprinae	ANCESTRAL SPECIES	17	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00960000189829	ENSGT00940000158403 #21	ENSGT00950000186340	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00940000158660 #27	ENSGT00390000013722.bb.a #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978.y.b #34	ENSGT00390000011932 #36	ENSGT00940000160339	ENSGT00390000008611	ENSGT01100000263512.a.a.b
Rambouillet Sheep	MODERN SPECIES	8	SCOC (ENSOARG00020013497)	CLGN (ENSOARG00020013338)	MGAT4D (ENSOARG00020012924) #11	ENSOARG00020012870	ELMOD2 (ENSOARG00020012799) #12	UCP1 (ENSOARG00020012680) #13	TBC1D9 (ENSOARG00020012430) #14	RNF150 (ENSOARG00020012195) #15	ZNF330 (ENSOARG00020012126) #16	ENSOARG00020012074	IL15 (ENSOARG00020011892) #17	INPP4B (ENSOARG00020011132) #18	ENSOARG00020011060	USP38 (ENSOARG00020010864) #21	ENSOARG00020010806	GAB1 (ENSOARG00020010619) #22	SMARCA5 (ENSOARG00020010256) #24	FREM3 (ENSOARG00020010076) #25	HHIP (ENSOARG00020025042) #27	ANAPC10 (ENSOARG00020025021) #28	ABCE1 (ENSOARG00020024985) #29	OTUD4 (ENSOARG00020024925) #30	SMAD1 (ENSOARG00020024894) #31	MMAA (ENSOARG00020024857) #32	C4orf51 (ENSOARG00020024840)	ZNF827 (ENSOARG00020024616) #33	POU4F2 (ENSOARG00020024207)	TTC29 (ENSOARG00020024092)	EDNRA (ENSOARG00020024024)	TMEM184C (ENSOARG00020023997)	PRMT9 (ENSOARG00020023961)
Goat	MODERN SPECIES	8	MGST2 (ENSCHIG00000013345)	ENSCHIG00000010711	ENSCHIG00000024566	SCOC (ENSCHIG00000024222)	CLGN (ENSCHIG00000015205)	MGAT4D (ENSCHIG00000015716) #11	ELMOD2 (ENSCHIG00000010724) #12	UCP1 (ENSCHIG00000011037) #13	TBC1D9 (ENSCHIG00000012014) #14	RNF150 (ENSCHIG00000025485) #15	ZNF330 (ENSCHIG00000009128) #16	ENSCHIG00000017067	IL15 (ENSCHIG00000024482) #17	INPP4B (ENSCHIG00000019789) #18	USP38 (ENSCHIG00000023190) #21	GAB1 (ENSCHIG00000024669) #22	ENSCHIG00000013730 #24	FREM3 (ENSCHIG00000016285) #25	ENSCHIG00000021322	HHIP (ENSCHIG00000005365) #27	ENSCHIG00000023676 #28	ABCE1 (ENSCHIG00000019274) #29	OTUD4 (ENSCHIG00000016816) #30	SMAD1 (ENSCHIG00000011281) #31	ENSCHIG00000012417	ENSCHIG00000016648	MMAA (ENSCHIG00000022132) #32	C4orf51 (ENSCHIG00000010712)	ZNF827 (ENSCHIG00000023405) #33	ENSCHIG00000010334 #34	SLC10A7 (ENSCHIG00000008543) #36
Bovinae	ANCESTRAL SPECIES	13	ENSGT00950000183201.b.b.a	ENSGT00390000008828.h	ENSGT00390000008828.g.a	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043.k #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00960000189829	ENSGT00940000158403 #21	ENSGT00950000186340	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00970000194377.a	ENSGT00550000075214	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978.w.a #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339
Bos	ANCESTRAL SPECIES	14	ENSGT00940000160288	ENSGT00960000186868	ENSGT00950000183201.b.b.a	ENSGT00390000008828.g.b	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043.k #16	ENSGT00390000016264 #17	ENSGT00940000157587.e #18	ENSGT00940000158403 #21	ENSGT00950000186340	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00970000194377.a	ENSGT00970000194377.b	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908.a #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978.w.a #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339
Bos_a	ANCESTRAL SPECIES	14	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828.g.a	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043.l.b #16	ENSGT00390000017043.k #16	ENSGT00390000016264 #17	ENSGT00940000157587.e #18	ENSGT00940000158403 #21	ENSGT00950000186340	ENSGT00940000156801 #22	ENSGT00940000156733 #24
Wild yak	MODERN SPECIES	1493												ENSBMUG00000000555 #18	ENSBMUG00000000576	USP38 (ENSBMUG00000000599) #21	ENSBMUG00000000611	GAB1 (ENSBMUG00000000723) #22
Domestic yak	MODERN SPECIES	7	ENSBGRG00000022257	CLGN (ENSBGRG00000022178)	MGAT4D (ENSBGRG00000022069) #11	ELMOD2 (ENSBGRG00000022015) #12	UCP1 (ENSBGRG00000021984) #13	TBC1D9 (ENSBGRG00000021876) #14	RNF150 (ENSBGRG00000021671) #15	ENSBGRG00000021644	ENSBGRG00000021593 #16	ENSBGRG00000021569	IL15 (ENSBGRG00000021437) #17	ENSBGRG00000021418	INPP4B (ENSBGRG00000020985) #18	USP38 (ENSBGRG00000020903) #21	ENSBGRG00000020881	GAB1 (ENSBGRG00000020583) #22	SMARCA5 (ENSBGRG00000020282) #24	ENSBGRG00000020247	ENSBGRG00000020228	TMEM192 (ENSBGRG00000020095)	KLHL2 (ENSBGRG00000019657)	MSMO1 (ENSBGRG00000019539)	CPE (ENSBGRG00000019419)	ENSBGRG00000019274	TLL1 (ENSBGRG00000019182)	ENSBGRG00000019119	NPY2R (ENSBGRG00000019075)	RBM46 (ENSBGRG00000018958)	ENSBGRG00000018917	ENSBGRG00000018894	ENSBGRG00000018841
Bos_b	ANCESTRAL SPECIES	13	ENSGT00940000160288	ENSGT00960000186868	ENSGT00950000183201.b.b.a	ENSGT00390000008828.g.b	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043.k #16	ENSGT00390000016264 #17	ENSGT00940000157587.e #18	ENSGT00940000158403 #21	ENSGT00950000186340	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00970000194377.a	ENSGT00970000194377.b	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908.a #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978.w.a #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339
Hybrid Bos Indicus	MODERN SPECIES	8	ENSBIXG00005009516	CLGN (ENSBIXG00005009427)	MGAT4D (ENSBIXG00005009367) #11	ELMOD2 (ENSBIXG00005009346) #12	UCP1 (ENSBIXG00005009326) #13	TBC1D9 (ENSBIXG00005009304) #14	RNF150 (ENSBIXG00005009250) #15	ENSBIXG00005000423 #16	IL15 (ENSBIXG00005000406) #17	INPP4B (ENSBIXG00005006091) #18	ENSBIXG00005009069	ENSBIXG00005009053	USP38 (ENSBIXG00005000366) #21	ENSBIXG00005009006	ENSBIXG00005009003	GAB1 (ENSBIXG00005006767) #22	SMARCA5 (ENSBIXG00005008943) #24	ENSBIXG00005008884	ENSBIXG00005006405	ENSBIXG00005008836	HHIP (ENSBIXG00005008793) #27	ANAPC10 (ENSBIXG00005008731) #28	ABCE1 (ENSBIXG00005008701) #29	OTUD4 (ENSBIXG00005008682) #30	SMAD1 (ENSBIXG00005008639) #31	MMAA (ENSBIXG00005008618) #32	C4orf51 (ENSBIXG00005006083)	ZNF827 (ENSBIXG00005008564) #33	ENSBIXG00005008497 #34	REELD1 (ENSBIXG00005008481) #35	SLC10A7 (ENSBIXG00005008458) #36
Cow	MODERN SPECIES	8	ENSBTAG00000049381	MGST2 (ENSBTAG00000021779)	MAML3 (ENSBTAG00000011373)	SCOC (ENSBTAG00000022109)	CLGN (ENSBTAG00000001580)	MGAT4D (ENSBTAG00000034281) #11	ELMOD2 (ENSBTAG00000014007) #12	UCP1 (ENSBTAG00000004647) #13	TBC1D9 (ENSBTAG00000018951) #14	RNF150 (ENSBTAG00000049010) #15	ZNF330 (ENSBTAG00000000297) #16	IL15 (ENSBTAG00000018200) #17	INPP4B (ENSBTAG00000014111) #18	USP38 (ENSBTAG00000001356) #21	ENSBTAG00000052695	GAB1 (ENSBTAG00000002813) #22	SMARCA5 (ENSBTAG00000003399) #24	GYPB (ENSBTAG00000047331)	GYPA (ENSBTAG00000039325)	HHIP (ENSBTAG00000016071) #27	ANAPC10 (ENSBTAG00000013326) #28	ABCE1 (ENSBTAG00000019854) #29	OTUD4 (ENSBTAG00000019857) #30	SMAD1 (ENSBTAG00000002835) #31	MMAA (ENSBTAG00000012800) #32	ENSBTAG00000049365	ZNF827 (ENSBTAG00000012738) #33	LSM6 (ENSBTAG00000014060) #34	REELD1 (ENSBTAG00000054105) #35	SLC10A7 (ENSBTAG00000034522) #36	POU4F2 (ENSBTAG00000005648)
American bison	MODERN SPECIES	3262											INPP4B (ENSBBBG00000005899) #18	ENSBBBG00000022302	ENSBBBG00000022272	USP38 (ENSBBBG00000022265) #21	ENSBBBG00000022239	GAB1 (ENSBBBG00000022226) #22	SMARCA5 (ENSBBBG00000022167) #24	ENSBBBG00000022121	ENSBBBG00000005838
Siberian musk deer	MODERN SPECIES	198	ENSMMSG00000001780	MAML3 (ENSMMSG00000001791)	SCOC (ENSMMSG00000001826)	CLGN (ENSMMSG00000001862)	MGAT4D (ENSMMSG00000001904) #11	ELMOD2 (ENSMMSG00000001964) #12	UCP1 (ENSMMSG00000001989) #13	TBC1D9 (ENSMMSG00000002010) #14	RNF150 (ENSMMSG00000002074) #15	ENSMMSG00000002114	ZNF330 (ENSMMSG00000002124) #16	IL15 (ENSMMSG00000002153) #17	INPP4B (ENSMMSG00000002208) #18	USP38 (ENSMMSG00000002337) #21	ENSMMSG00000002368	GAB1 (ENSMMSG00000002392) #22	ENSMMSG00000002473 #24
Yarkand deer	MODERN SPECIES	28	ENSCHYG00000000146	CLGN (ENSCHYG00000000178)	MGAT4D (ENSCHYG00000000222) #11	ELMOD2 (ENSCHYG00000000281) #12	ENSCHYG00000000307	UCP1 (ENSCHYG00000000315) #13	TBC1D9 (ENSCHYG00000000347) #14	RNF150 (ENSCHYG00000000469) #15	ZNF330 (ENSCHYG00000000564) #16	IL15 (ENSCHYG00000000606) #17	ENSCHYG00000000643	INPP4B (ENSCHYG00000000675) #18	ENSCHYG00000000800	USP38 (ENSCHYG00000000822) #21	ENSCHYG00000000861	GAB1 (ENSCHYG00000000879) #22	SMARCA5 (ENSCHYG00000000935) #24	FREM3 (ENSCHYG00000001026) #25	HHIP (ENSCHYG00000001103) #27	ANAPC10 (ENSCHYG00000001160) #28	ABCE1 (ENSCHYG00000001201) #29	OTUD4 (ENSCHYG00000001224) #30	SMAD1 (ENSCHYG00000001287) #31	MMAA (ENSCHYG00000001302) #32	C4orf51 (ENSCHYG00000001340)	ZNF827 (ENSCHYG00000001410) #33	ENSCHYG00000001720 #34	REELD1 (ENSCHYG00000001740) #35	SLC10A7 (ENSCHYG00000001854) #36	POU4F2 (ENSCHYG00000002171)	TTC29 (ENSCHYG00000002186)
Camelidae	ANCESTRAL SPECIES	20	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00910000148499	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00950000185087	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339	ENSGT00390000008611
Arabian camel	MODERN SPECIES	11	MGST2 (ENSCDRG00005001316)	MAML3 (ENSCDRG00005001298)	SCOC (ENSCDRG00005001274)	CLGN (ENSCDRG00005001251)	MGAT4D (ENSCDRG00005001126) #11	ELMOD2 (ENSCDRG00005001082) #12	UCP1 (ENSCDRG00005001056) #13	ENSCDRG00005001035	TBC1D9 (ENSCDRG00005000929) #14	RNF150 (ENSCDRG00005000887) #15	ZNF330 (ENSCDRG00005000859) #16	IL15 (ENSCDRG00005000841) #17	INPP4B (ENSCDRG00005000441) #18	ENSCDRG00005000327	USP38 (ENSCDRG00005000298) #21	GAB1 (ENSCDRG00005000265) #22	ENSCDRG00005000246	SMARCA5 (ENSCDRG00005000105) #24	FREM3 (ENSCDRG00005000076) #25	HHIP (ENSCDRG00005000052) #27	ANAPC10 (ENSCDRG00005000035) #28	ABCE1 (ENSCDRG00005000029) #29	OTUD4 (ENSCDRG00005000022) #30	SMAD1 (ENSCDRG00005000018) #31	MMAA (ENSCDRG00005020233) #32	C4orf51 (ENSCDRG00005020225)	ZNF827 (ENSCDRG00005020126) #33	LSM6 (ENSCDRG00005020097) #34	REELD1 (ENSCDRG00005020091) #35	SLC10A7 (ENSCDRG00005020015) #36	POU4F2 (ENSCDRG00005019973)
Alpaca	MODERN SPECIES	3508																GAB1 (ENSVPAG00000008795) #22
Atlantogenata	ANCESTRAL SPECIES	49	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00950000183201.b.a.b	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339	ENSGT00390000008611	ENSGT01100000263512.a.a.b	ENSGT00940000155201
Xenarthra	ANCESTRAL SPECIES	87	ENSGT00940000157090	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00950000183201.b.a.b	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24
Armadillo	MODERN SPECIES	2885	MGST2 (ENSDNOG00000034606)	MAML3 (ENSDNOG00000002937)	ENSDNOG00000046815	SCOC (ENSDNOG00000030600)	CLGN (ENSDNOG00000004054)	ENSDNOG00000038747 #11	ELMOD2 (ENSDNOG00000035842) #12	TBC1D9 (ENSDNOG00000005384) #14	RNF150 (ENSDNOG00000038812) #15	ZNF330 (ENSDNOG00000048527) #16	ENSDNOG00000041774	IL15 (ENSDNOG00000034678) #17	INPP4B (ENSDNOG00000046642) #18	USP38 (ENSDNOG00000043607) #21	ENSDNOG00000045535	GAB1 (ENSDNOG00000019599) #22	SMARCA5 (ENSDNOG00000009158) #24
Sloth	MODERN SPECIES	959																GAB1 (ENSCHOG00000004704) #22
Afrotheria	ANCESTRAL SPECIES	93											ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00390000011932 #36	ENSGT00940000160339	ENSGT00390000008611	ENSGT01100000263512.a.a.b	ENSGT00940000155201	ENSGT00940000158472
Afrotheria_a	ANCESTRAL SPECIES	97											ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00390000011932 #36	ENSGT00940000160339	ENSGT00390000008611	ENSGT01100000263512.a.a.b	ENSGT00940000155201	ENSGT00940000158472
Elephant	MODERN SPECIES	436											RNF150 (ENSLAFG00000002690) #15	ZNF330 (ENSLAFG00000002230) #16	IL15 (ENSLAFG00000008638) #17	INPP4B (ENSLAFG00000017626) #18	USP38 (ENSLAFG00000015972) #21	GAB1 (ENSLAFG00000002429) #22	SMARCA5 (ENSLAFG00000007795) #24	HHIP (ENSLAFG00000010367) #27	ANAPC10 (ENSLAFG00000009176) #28	ABCE1 (ENSLAFG00000017970) #29	OTUD4 (ENSLAFG00000011317) #30	SMAD1 (ENSLAFG00000018345) #31	MMAA (ENSLAFG00000031958) #32	ZNF827 (ENSLAFG00000029831) #33	LSM6 (ENSLAFG00000001952) #34	SLC10A7 (ENSLAFG00000000502) #36	POU4F2 (ENSLAFG00000001505)	TTC29 (ENSLAFG00000007613)	ENSLAFG00000026497	EDNRA (ENSLAFG00000008408)	TMEM184C (ENSLAFG00000030924)
Hyrax	MODERN SPECIES	880																GAB1 (ENSPCAG00000015672) #22
Tenrec	MODERN SPECIES	8971																GAB1 (ENSETEG00000000599) #22
Marsupialia	ANCESTRAL SPECIES	7	ENSGT00390000004827	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171 #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00950000186280	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339	ENSGT00390000008611
Opossum	MODERN SPECIES	4	SETD7 (ENSMODG00000000122)	MGST2 (ENSMODG00000025529)	ENSMODG00000051069	ENSMODG00000038155	SCOC (ENSMODG00000025528)	CLGN (ENSMODG00000000160)	ENSMODG00000025527 #11	ELMOD2 (ENSMODG00000024910) #12	UCP1 (ENSMODG00000000172) #13	TBC1D9 (ENSMODG00000000209) #14	ZNF330 (ENSMODG00000000223) #16	IL15 (ENSMODG00000041399) #17	INPP4B (ENSMODG00000000308) #18	ENSMODG00000029399	USP38 (ENSMODG00000000319) #21	GAB1 (ENSMODG00000000336) #22	SMARCA5 (ENSMODG00000000391) #24	ENSMODG00000000417 #25	ENSMODG00000027513	HHIP (ENSMODG00000000432) #27	ENSMODG00000027672	ANAPC10 (ENSMODG00000000439) #28	ABCE1 (ENSMODG00000000465) #29	OTUD4 (ENSMODG00000000487) #30	SMAD1 (ENSMODG00000000500) #31	MMAA (ENSMODG00000000508) #32	ENSMODG00000046196	ZNF827 (ENSMODG00000000520) #33	LSM6 (ENSMODG00000039383) #34	ENSMODG00000000547 #35	SLC10A7 (ENSMODG00000000522) #36
Marsupialia_b	ANCESTRAL SPECIES	8	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171.c #15	ENSGT00940000156171.d #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00950000186280	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00520000060562	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339	ENSGT00390000008611
Diprotodontia	ANCESTRAL SPECIES	53	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171.c #15	ENSGT00940000156171.d #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00950000186280	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339	ENSGT00390000008611	ENSGT01100000263512.a.a.b
Diprotodontia_a	ANCESTRAL SPECIES	50	ENSGT00940000160288	ENSGT00950000183201.b.b.a	ENSGT00390000008828	ENSGT00950000182915.a.a.b	ENSGT00940000161998 #11	ENSGT00940000156589 #12	ENSGT00940000160382 #13	ENSGT00940000157878 #14	ENSGT00940000156171.c #15	ENSGT00940000156171.d #15	ENSGT00390000017043 #16	ENSGT00390000016264 #17	ENSGT00940000157587 #18	ENSGT00950000186280	ENSGT00940000158403 #21	ENSGT00940000156801 #22	ENSGT00940000156733 #24	ENSGT00940000162501 #25	ENSGT00940000158660 #27	ENSGT00390000013722 #28	ENSGT00390000015089 #29	ENSGT00940000160512 #30	ENSGT00940000154391.a.a #31	ENSGT00390000009908 #32	ENSGT00940000156063 #33	ENSGT00940000154978 #34	ENSGT00940000163277 #35	ENSGT00390000011932 #36	ENSGT00940000160339	ENSGT00390000008611	ENSGT01100000263512.a.a.b
Common wonbat	MODERN SPECIES	1022		MGST2 (ENSVURG00010009730)	MAML3 (ENSVURG00010009748)	SCOC (ENSVURG00010009766)	CLGN (ENSVURG00010009814)	ENSVURG00010009862 #11	ELMOD2 (ENSVURG00010009881) #12	UCP1 (ENSVURG00010009888) #13	TBC1D9 (ENSVURG00010009910) #14	RNF150 (ENSVURG00010009942) #15	ENSVURG00010010021 #15	ZNF330 (ENSVURG00010010035) #16	IL15 (ENSVURG00010010052) #17	INPP4B (ENSVURG00010010079) #18	USP38 (ENSVURG00010010143) #21	GAB1 (ENSVURG00010010165) #22	SMARCA5 (ENSVURG00010010208) #24	ENSVURG00010010267 #25	ENSVURG00010010354	ENSVURG00010010360	HHIP (ENSVURG00010010374) #27	ANAPC10 (ENSVURG00010010401) #28	ABCE1 (ENSVURG00010010434) #29	OTUD4 (ENSVURG00010010453) #30	SMAD1 (ENSVURG00010010474) #31	MMAA (ENSVURG00010010489) #32	ZNF827 (ENSVURG00010010514) #33	LSM6 (ENSVURG00010010584) #34	ENSVURG00010010563 #35	SLC10A7 (ENSVURG00010010610) #36	POU4F2 (ENSVURG00010010622)
koala	MODERN SPECIES	36	IL1RAPL1 (ENSPCIG00000020933)	ENSPCIG00000036290	ENSPCIG00000020937	ENSPCIG00000004645	CLGN (ENSPCIG00000004618)	ENSPCIG00000004610 #11	ELMOD2 (ENSPCIG00000004606) #12	UCP1 (ENSPCIG00000023329) #13	TBC1D9 (ENSPCIG00000016433) #14	RNF150 (ENSPCIG00000022120) #15	ZNF330 (ENSPCIG00000022112) #16	IL15 (ENSPCIG00000009548) #17	INPP4B (ENSPCIG00000035956) #18	ENSPCIG00000003895	USP38 (ENSPCIG00000003885) #21	GAB1 (ENSPCIG00000003901) #22	SMARCA5 (ENSPCIG00000003926) #24	ENSPCIG00000002997 #25	HHIP (ENSPCIG00000003990) #27
Wallaby	MODERN SPECIES	1845																GAB1 (ENSMEUG00000004113) #22
Tasmanian devil	MODERN SPECIES	5	RAB33B (ENSSHAG00000023446)	SETD7 (ENSSHAG00000000798)	MGST2 (ENSSHAG00000026843)	MAML3 (ENSSHAG00000030735)	SCOC (ENSSHAG00000003474)	CLGN (ENSSHAG00000001719)	ENSSHAG00000001841 #11	ELMOD2 (ENSSHAG00000018184) #12	UCP1 (ENSSHAG00000026436) #13	TBC1D9 (ENSSHAG00000024926) #14	RNF150 (ENSSHAG00000028359) #15	ZNF330 (ENSSHAG00000032038) #16	IL15 (ENSSHAG00000023836) #17	INPP4B (ENSSHAG00000015055) #18	USP38 (ENSSHAG00000011121) #21	GAB1 (ENSSHAG00000009133) #22	SMARCA5 (ENSSHAG00000008464) #24	ENSSHAG00000007475 #25	HHIP (ENSSHAG00000011890) #27	ANAPC10 (ENSSHAG00000009867) #28	ABCE1 (ENSSHAG00000009721) #29	OTUD4 (ENSSHAG00000009272) #30	SMAD1 (ENSSHAG00000006387) #31	MMAA (ENSSHAG00000004904) #32	ENSSHAG00000002949	ZNF827 (ENSSHAG00000022259) #33	LSM6 (ENSSHAG00000030833) #34	SLC10A7 (ENSSHAG00000021517) #36	POU4F2 (ENSSHAG00000031646)	TTC29 (ENSSHAG00000012136)	EDNRA (ENSSHAG00000021466)
Platypus	MODERN SPECIES	3	RAB33B (ENSOANG00000036558)	SETD7 (ENSOANG00000015287)	MGST2 (ENSOANG00000015288)	ENSOANG00000015289	ENSOANG00000051041	CLGN (ENSOANG00000015291)	ENSOANG00000015292 #11	ELMOD2 (ENSOANG00000015293) #12	UCP1 (ENSOANG00000015294) #13	TBC1D9 (ENSOANG00000013540) #14	RNF150 (ENSOANG00000050448) #15	ZNF330 (ENSOANG00000013166) #16	ENSOANG00000047662 #17	INPP4B (ENSOANG00000013164) #18	USP38 (ENSOANG00000013926) #21	GAB1 (ENSOANG00000013925) #22	SMARCA5 (ENSOANG00000013921) #24	HHIP (ENSOANG00000013920) #27	ANAPC10 (ENSOANG00000013919) #28	ABCE1 (ENSOANG00000013918) #29	OTUD4 (ENSOANG00000038671) #30	SMAD1 (ENSOANG00000006538) #31	MMAA (ENSOANG00000006537) #32	ENSOANG00000046734	ZNF827 (ENSOANG00000006534) #33	LSM6 (ENSOANG00000045062) #34	ENSOANG00000036251 #35	SLC10A7 (ENSOANG00000006896) #36	POU4F2 (ENSOANG00000039675)	ENSOANG00000005261	EDNRA (ENSOANG00000005262)