Mus_A	ANCESTRAL SPECIES	15	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT01030000234549.a.a.a.b	ENSGT00940000162843	ENSGT00940000162426	ENSGT00940000153588.b	ENSGT00390000002034	ENSGT00390000003897.s.b.a.a.b	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000018621	ENSGT00940000156650 #20	ENSGT00950000182994.B.a.a.a #21	ENSGT00390000004735.A #22	ENSGT01050000244850.A.a #23	ENSGT00410000025802.g.a	ENSGT00730000111022 #24	ENSGT00950000182808.b.b	ENSGT00950000183004.a.a.a.b	ENSGT00530000063435.a.o	ENSGT00530000063808.a	ENSGT00410000025802.g.b.q.a	ENSGT01050000244815.B.a.a	ENSGT01100000263574.b.j	ENSGT00390000000062.x.b.k.b	ENSGT00390000000062.x.b.l.b	ENSGT00390000001700.a.b.b	ENSGT00940000159803	ENSGT00510000047092
Mus_B	ANCESTRAL SPECIES	14	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT01030000234549.a.a.a.b	ENSGT00940000162843	ENSGT00940000162426	ENSGT00940000153588.b	ENSGT00390000002034	ENSGT00390000003897.s.b.a.b.b	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000018621	ENSGT00940000156650 #20	ENSGT00950000182994.B.a.a.a #21	ENSGT00390000004735.A #22	ENSGT01050000244850.A.a #23	ENSGT00410000025802.g.a	ENSGT00730000111022 #24	ENSGT00950000182808.b.b	ENSGT00950000183004.a.a.a.b	ENSGT00530000063435.a.o	ENSGT00530000063808.a	ENSGT00410000025802.g.b.q.a	ENSGT01050000244815.B.a.a	ENSGT01100000263574.b.j	ENSGT00390000001700.a.b.b.o.a	ENSGT00940000159803	ENSGT00510000047092	ENSGT00940000158744	ENSGT00390000005685
Mus_C	ANCESTRAL SPECIES	27	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT01030000234549.a.a.a.b	ENSGT00940000162843	ENSGT00940000162426	ENSGT00940000153588.b	ENSGT00390000002034	ENSGT00390000003897.s.b.a.b.b	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000018621	ENSGT00940000156650 #20	ENSGT00950000182994.B.a.a.a #21	ENSGT00390000004735.A #22	ENSGT01050000244850.A.a #23	ENSGT00410000025802.g.a	ENSGT00730000111022 #24	ENSGT00950000182808.b.b	ENSGT00950000183004.a.a.a.b	ENSGT00530000063435.a.o	ENSGT00530000063808.a	ENSGT00410000025802.g.b.q.a	ENSGT01050000244815.B.a.a	ENSGT01100000263574.b.j	ENSGT00510000047092	ENSGT00940000158744	ENSGT00390000005685	ENSGT00940000160294	ENSGT00940000154783.f
Steppe mouse	MODERN SPECIES	1762														ENSMSIG00000025685 #20	Gdi1 (ENSMSIG00000025652) #21	Fam50a (ENSMSIG00000025621) #22	Plxna3 (ENSMSIG00000025574) #23	Ubl4a (ENSMSIG00000025541) #24
spretus	MODERN SPECIES	19	Naa10 (MGP_SPRETEiJ_G0034321)	Renbp (MGP_SPRETEiJ_G0034322)	Hcfc1 (MGP_SPRETEiJ_G0034323)	Irak1 (MGP_SPRETEiJ_G0034324)	Mecp2 (MGP_SPRETEiJ_G0034325)	Opn1mw (MGP_SPRETEiJ_G0034326)	Tex28 (MGP_SPRETEiJ_G0034327)	Tktl1 (MGP_SPRETEiJ_G0034328)	Flna (MGP_SPRETEiJ_G0034329)	Emd (MGP_SPRETEiJ_G0034330)	MGP_SPRETEiJ_G0034331	Dnase1l1 (MGP_SPRETEiJ_G0034332)	Tafazzin (MGP_SPRETEiJ_G0034333)	Atp6ap1 (MGP_SPRETEiJ_G0034334) #20	Gdi1 (MGP_SPRETEiJ_G0034335) #21	Fam50a (MGP_SPRETEiJ_G0034336) #22	Plxna3 (MGP_SPRETEiJ_G0034337) #23	Lage3 (MGP_SPRETEiJ_G0034338)	Ubl4a (MGP_SPRETEiJ_G0034339) #24	Slc10a3 (MGP_SPRETEiJ_G0034340)	Fam3a (MGP_SPRETEiJ_G0034341)	Ikbkg (MGP_SPRETEiJ_G0034342)	G6pdx (MGP_SPRETEiJ_G0034343)	MGP_SPRETEiJ_G0034344	Or7r1 (MGP_SPRETEiJ_G0034345)	Or13ae2 (MGP_SPRETEiJ_G0034346)	MGP_SPRETEiJ_G0034347	MGP_SPRETEiJ_G0034348	Dkc1 (MGP_SPRETEiJ_G0034351)	Mpp1 (MGP_SPRETEiJ_G0034352)	Smim9 (MGP_SPRETEiJ_G0034353)
Mouse	MODERN SPECIES	37	Naa10 (ENSMUSG00000031388)	Renbp (ENSMUSG00000031387)	Hcfc1 (ENSMUSG00000031386)	Irak1 (ENSMUSG00000031392)	Mecp2 (ENSMUSG00000031393)	Opn1mw (ENSMUSG00000031394)	Tex28 (ENSMUSG00000062564)	Tktl1 (ENSMUSG00000031397)	Flna (ENSMUSG00000031328)	Emd (ENSMUSG00000001964)	Rpl10 (ENSMUSG00000008682)	Dnase1l1 (ENSMUSG00000019088)	Tafazzin (ENSMUSG00000009995)	Atp6ap1 (ENSMUSG00000019087) #20	Gdi1 (ENSMUSG00000015291) #21	Fam50a (ENSMUSG00000001962) #22	Plxna3 (ENSMUSG00000031398) #23	Lage3 (ENSMUSG00000015289)	Ubl4a (ENSMUSG00000015290) #24	Slc10a3 (ENSMUSG00000032806)	Fam3a (ENSMUSG00000031399)	Ikbkg (ENSMUSG00000004221)	G6pdx (ENSMUSG00000031400)	Ctag2l1 (ENSMUSG00000079536)	Or7r1 (ENSMUSG00000043715)	Or13ae2 (ENSMUSG00000051706)	Pwwp4c (ENSMUSG00000079534)	Ctag2l2 (ENSMUSG00000079532)	Pwwp4d (ENSMUSG00000079531)	Gab3 (ENSMUSG00000032750)	Dkc1 (ENSMUSG00000031403)
Ryukyu mouse	MODERN SPECIES	19	Naa10 (MGP_CAROLIEiJ_G0033166)	Renbp (MGP_CAROLIEiJ_G0033167)	Hcfc1 (MGP_CAROLIEiJ_G0033168)	Irak1 (MGP_CAROLIEiJ_G0033169)	Mecp2 (MGP_CAROLIEiJ_G0033170)	Opn1mw (MGP_CAROLIEiJ_G0033171)	Tex28 (MGP_CAROLIEiJ_G0033172)	Tktl1 (MGP_CAROLIEiJ_G0033173)	Flna (MGP_CAROLIEiJ_G0033174)	Emd (MGP_CAROLIEiJ_G0033175)	MGP_CAROLIEiJ_G0033176	Dnase1l1 (MGP_CAROLIEiJ_G0033177)	Tafazzin (MGP_CAROLIEiJ_G0033178)	Atp6ap1 (MGP_CAROLIEiJ_G0033179) #20	Gdi1 (MGP_CAROLIEiJ_G0033180) #21	Fam50a (MGP_CAROLIEiJ_G0033181) #22	Plxna3 (MGP_CAROLIEiJ_G0033182) #23	Lage3 (MGP_CAROLIEiJ_G0033183)	Ubl4a (MGP_CAROLIEiJ_G0033184) #24	Slc10a3 (MGP_CAROLIEiJ_G0033185)	Fam3a (MGP_CAROLIEiJ_G0033186)	Ikbkg (MGP_CAROLIEiJ_G0033187)	G6pdx (MGP_CAROLIEiJ_G0033188)	Or7r1 (MGP_CAROLIEiJ_G0033189)	Or13ae2 (MGP_CAROLIEiJ_G0033190)	Dkc1 (MGP_CAROLIEiJ_G0033191)	Mpp1 (MGP_CAROLIEiJ_G0033192)	Smim9 (MGP_CAROLIEiJ_G0033193)	F8 (MGP_CAROLIEiJ_G0033194)	Fundc2 (MGP_CAROLIEiJ_G0033195)	Cmc4 (MGP_CAROLIEiJ_G0033196)