Glires ANCESTRAL SPECIES 10 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00910000146917 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 ENSGT00390000003897.s.b.a.b.b ENSGT00950000182846.a.a.a.a.a ENSGT00390000018621 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a ENSGT00730000111022 #24 ENSGT00950000182808.b.b ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00410000025802.g.b ENSGT01050000244815.B.a.a ENSGT00390000000062.x.b ENSGT00390000001700.a.b.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 Rodentia ANCESTRAL SPECIES 10 ENSGT00390000013740 ENSGT00940000161383 ENSGT00940000160502 ENSGT00910000146917 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 ENSGT00390000003897.s.b.a.b.b ENSGT00950000182846.a.a.a.a.a ENSGT00390000018621 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a ENSGT00730000111022 #24 ENSGT00950000182808.b.b ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00410000025802.g.b ENSGT01050000244815.B.a.a ENSGT00390000000062.x.b ENSGT00390000001700.a.b.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 Rodentia_B ANCESTRAL SPECIES 16 ENSGT00390000013740 ENSGT00940000161383 ENSGT00940000160502 ENSGT00910000146917 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 ENSGT00390000003897.s.b.a.b.b ENSGT00950000182846.a.a.a.a.a ENSGT00390000018621 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a ENSGT00730000111022 #24 ENSGT00950000182808.b.b ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00410000025802.g.b ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Myomorpha ANCESTRAL SPECIES 6 ENSGT00390000013740 ENSGT00940000161383 ENSGT00940000160502 ENSGT00910000146917 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 ENSGT00390000003897.s.b.a.b.b ENSGT00950000182846.a.a.a.a.a ENSGT00390000018621 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a ENSGT00730000111022 #24 ENSGT00950000182808.b.b ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00410000025802.g.b ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Muroidea ANCESTRAL SPECIES 13 ENSGT00390000013740 ENSGT00940000161383 ENSGT00940000160502 ENSGT00910000146917 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 ENSGT00390000003897.s.b.a.b.b ENSGT00950000182846.a.a.a.a.a ENSGT00390000018621 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a ENSGT00730000111022 #24 ENSGT00950000182808.b.b ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00410000025802.g.b ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Muroidea_A ANCESTRAL SPECIES 7 ENSGT00390000013740 ENSGT00940000161383 ENSGT00940000160502 ENSGT00910000146917 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 ENSGT00390000003897.s.b.a.b.b ENSGT00950000182846.a.a.a.a.a ENSGT00390000018621 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a ENSGT00730000111022 #24 ENSGT00950000182808.b.b ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00410000025802.g.b.q.a ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Murinae ANCESTRAL SPECIES 14 ENSGT00550000074803 ENSGT00390000013740 ENSGT00940000161383 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 ENSGT00390000003897.s.b.a.a.b ENSGT00950000182846.a.a.a.a.a ENSGT00390000018621 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a ENSGT00730000111022 #24 ENSGT00950000182808.b.b ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00410000025802.g.b.q.a ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00390000016992 ENSGT00390000000062.x.b.k.b ENSGT00390000000062.x.b.l.b ENSGT00390000001700.a.b.b ENSGT00940000159803 Mus ANCESTRAL SPECIES 9 ENSGT00550000074803 ENSGT00390000013740 ENSGT00940000161383 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 ENSGT00390000003897.s.b.a.a.b ENSGT00950000182846.a.a.a.a.a ENSGT00390000018621 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a ENSGT00730000111022 #24 ENSGT00950000182808.b.b ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a.o ENSGT00530000063808.a ENSGT00410000025802.g.b.q.a ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Mus_A ANCESTRAL SPECIES 15 ENSGT00550000074803 ENSGT00390000013740 ENSGT00940000161383 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 ENSGT00390000003897.s.b.a.a.b ENSGT00950000182846.a.a.a.a.a ENSGT00390000018621 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a ENSGT00730000111022 #24 ENSGT00950000182808.b.b ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a.o ENSGT00530000063808.a ENSGT00410000025802.g.b.q.a ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00390000000062.x.b.k.b ENSGT00390000000062.x.b.l.b ENSGT00390000001700.a.b.b ENSGT00940000159803 ENSGT00510000047092 Mus_B ANCESTRAL SPECIES 14 ENSGT00550000074803 ENSGT00390000013740 ENSGT00940000161383 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 ENSGT00390000003897.s.b.a.b.b ENSGT00950000182846.a.a.a.a.a ENSGT00390000018621 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a ENSGT00730000111022 #24 ENSGT00950000182808.b.b ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a.o ENSGT00530000063808.a ENSGT00410000025802.g.b.q.a ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00390000001700.a.b.b.o.a ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 Mus_C ANCESTRAL SPECIES 27 ENSGT00550000074803 ENSGT00390000013740 ENSGT00940000161383 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 ENSGT00390000003897.s.b.a.b.b ENSGT00950000182846.a.a.a.a.a ENSGT00390000018621 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a ENSGT00730000111022 #24 ENSGT00950000182808.b.b ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a.o ENSGT00530000063808.a ENSGT00410000025802.g.b.q.a ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f Steppe mouse MODERN SPECIES 1762 ENSMSIG00000025685 #20 Gdi1 (ENSMSIG00000025652) #21 Fam50a (ENSMSIG00000025621) #22 Plxna3 (ENSMSIG00000025574) #23 Ubl4a (ENSMSIG00000025541) #24 spretus MODERN SPECIES 19 Naa10 (MGP_SPRETEiJ_G0034321) Renbp (MGP_SPRETEiJ_G0034322) Hcfc1 (MGP_SPRETEiJ_G0034323) Irak1 (MGP_SPRETEiJ_G0034324) Mecp2 (MGP_SPRETEiJ_G0034325) Opn1mw (MGP_SPRETEiJ_G0034326) Tex28 (MGP_SPRETEiJ_G0034327) Tktl1 (MGP_SPRETEiJ_G0034328) Flna (MGP_SPRETEiJ_G0034329) Emd (MGP_SPRETEiJ_G0034330) MGP_SPRETEiJ_G0034331 Dnase1l1 (MGP_SPRETEiJ_G0034332) Tafazzin (MGP_SPRETEiJ_G0034333) Atp6ap1 (MGP_SPRETEiJ_G0034334) #20 Gdi1 (MGP_SPRETEiJ_G0034335) #21 Fam50a (MGP_SPRETEiJ_G0034336) #22 Plxna3 (MGP_SPRETEiJ_G0034337) #23 Lage3 (MGP_SPRETEiJ_G0034338) Ubl4a (MGP_SPRETEiJ_G0034339) #24 Slc10a3 (MGP_SPRETEiJ_G0034340) Fam3a (MGP_SPRETEiJ_G0034341) Ikbkg (MGP_SPRETEiJ_G0034342) G6pdx (MGP_SPRETEiJ_G0034343) MGP_SPRETEiJ_G0034344 Or7r1 (MGP_SPRETEiJ_G0034345) Or13ae2 (MGP_SPRETEiJ_G0034346) MGP_SPRETEiJ_G0034347 MGP_SPRETEiJ_G0034348 Dkc1 (MGP_SPRETEiJ_G0034351) Mpp1 (MGP_SPRETEiJ_G0034352) Smim9 (MGP_SPRETEiJ_G0034353) Mouse MODERN SPECIES 37 Naa10 (ENSMUSG00000031388) Renbp (ENSMUSG00000031387) Hcfc1 (ENSMUSG00000031386) Irak1 (ENSMUSG00000031392) Mecp2 (ENSMUSG00000031393) Opn1mw (ENSMUSG00000031394) Tex28 (ENSMUSG00000062564) Tktl1 (ENSMUSG00000031397) Flna (ENSMUSG00000031328) Emd (ENSMUSG00000001964) Rpl10 (ENSMUSG00000008682) Dnase1l1 (ENSMUSG00000019088) Tafazzin (ENSMUSG00000009995) Atp6ap1 (ENSMUSG00000019087) #20 Gdi1 (ENSMUSG00000015291) #21 Fam50a (ENSMUSG00000001962) #22 Plxna3 (ENSMUSG00000031398) #23 Lage3 (ENSMUSG00000015289) Ubl4a (ENSMUSG00000015290) #24 Slc10a3 (ENSMUSG00000032806) Fam3a (ENSMUSG00000031399) Ikbkg (ENSMUSG00000004221) G6pdx (ENSMUSG00000031400) Ctag2l1 (ENSMUSG00000079536) Or7r1 (ENSMUSG00000043715) Or13ae2 (ENSMUSG00000051706) Pwwp4c (ENSMUSG00000079534) Ctag2l2 (ENSMUSG00000079532) Pwwp4d (ENSMUSG00000079531) Gab3 (ENSMUSG00000032750) Dkc1 (ENSMUSG00000031403) Ryukyu mouse MODERN SPECIES 19 Naa10 (MGP_CAROLIEiJ_G0033166) Renbp (MGP_CAROLIEiJ_G0033167) Hcfc1 (MGP_CAROLIEiJ_G0033168) Irak1 (MGP_CAROLIEiJ_G0033169) Mecp2 (MGP_CAROLIEiJ_G0033170) Opn1mw (MGP_CAROLIEiJ_G0033171) Tex28 (MGP_CAROLIEiJ_G0033172) Tktl1 (MGP_CAROLIEiJ_G0033173) Flna (MGP_CAROLIEiJ_G0033174) Emd (MGP_CAROLIEiJ_G0033175) MGP_CAROLIEiJ_G0033176 Dnase1l1 (MGP_CAROLIEiJ_G0033177) Tafazzin (MGP_CAROLIEiJ_G0033178) Atp6ap1 (MGP_CAROLIEiJ_G0033179) #20 Gdi1 (MGP_CAROLIEiJ_G0033180) #21 Fam50a (MGP_CAROLIEiJ_G0033181) #22 Plxna3 (MGP_CAROLIEiJ_G0033182) #23 Lage3 (MGP_CAROLIEiJ_G0033183) Ubl4a (MGP_CAROLIEiJ_G0033184) #24 Slc10a3 (MGP_CAROLIEiJ_G0033185) Fam3a (MGP_CAROLIEiJ_G0033186) Ikbkg (MGP_CAROLIEiJ_G0033187) G6pdx (MGP_CAROLIEiJ_G0033188) Or7r1 (MGP_CAROLIEiJ_G0033189) Or13ae2 (MGP_CAROLIEiJ_G0033190) Dkc1 (MGP_CAROLIEiJ_G0033191) Mpp1 (MGP_CAROLIEiJ_G0033192) Smim9 (MGP_CAROLIEiJ_G0033193) F8 (MGP_CAROLIEiJ_G0033194) Fundc2 (MGP_CAROLIEiJ_G0033195) Cmc4 (MGP_CAROLIEiJ_G0033196) Shrew mouse MODERN SPECIES 23 Naa10 (MGP_PahariEiJ_G0031709) Renbp (MGP_PahariEiJ_G0031710) Hcfc1 (MGP_PahariEiJ_G0031711) Irak1 (MGP_PahariEiJ_G0031712) Mecp2 (MGP_PahariEiJ_G0031713) Opn1mw (MGP_PahariEiJ_G0031714) Tex28 (MGP_PahariEiJ_G0031715) MGP_PahariEiJ_G0031716 Flna (MGP_PahariEiJ_G0031717) Emd (MGP_PahariEiJ_G0031718) MGP_PahariEiJ_G0031719 Dnase1l1 (MGP_PahariEiJ_G0031720) Tafazzin (MGP_PahariEiJ_G0031721) Atp6ap1 (MGP_PahariEiJ_G0031722) #20 Gdi1 (MGP_PahariEiJ_G0031723) #21 Fam50a (MGP_PahariEiJ_G0031724) #22 Plxna3 (MGP_PahariEiJ_G0031725) #23 Lage3 (MGP_PahariEiJ_G0031726) Ubl4a (MGP_PahariEiJ_G0031727) #24 Slc10a3 (MGP_PahariEiJ_G0031728) Fam3a (MGP_PahariEiJ_G0031729) Ikbkg (MGP_PahariEiJ_G0031730) G6pdx (MGP_PahariEiJ_G0031731) Or7r1 (MGP_PahariEiJ_G0031732) Or13ae2 (MGP_PahariEiJ_G0031733) Gab3 (MGP_PahariEiJ_G0031734) Dkc1 (MGP_PahariEiJ_G0031735) Mpp1 (MGP_PahariEiJ_G0031736) Smim9 (MGP_PahariEiJ_G0031737) F8 (MGP_PahariEiJ_G0031738) Fundc2 (MGP_PahariEiJ_G0031739) Rat DUPLICATION Rat MODERN SPECIES 46 Renbp (ENSRNOG00000054765) Hcfc1 (ENSRNOG00000051948) Irak1 (ENSRNOG00000060869) Mecp2 (ENSRNOG00000056659) Opn1mw (ENSRNOG00000051529) Tex28 (ENSRNOG00000051438) Tktl1 (ENSRNOG00000055557) Flna (ENSRNOG00000054890) Emd (ENSRNOG00000058882) Rpl10 (ENSRNOG00000056765) Dnase1l1 (ENSRNOG00000055641) ENSRNOG00000063225 Tafazzin (ENSRNOG00000053023) Atp6ap1 (ENSRNOG00000054352) #20 Gdi1 (ENSRNOG00000056870) #21 Fam50a (ENSRNOG00000058439) #22 Plxna3 (ENSRNOG00000060464) #23 Lage3 (ENSRNOG00000053456) Slc10a3 (ENSRNOG00000060580) Ubl4a (ENSRNOG00000053061) #24 Fam3a (ENSRNOG00000060623) G6pd (ENSRNOG00000056728) Ikbkg (ENSRNOG00000060936) LOC690348 (ENSRNOG00000060839) Or7r1 (ENSRNOG00000058820) LOC120099253 (ENSRNOG00000061511) ENSRNOG00000067246 Rat MODERN SPECIES 14 Vamp8 (ENSRNOG00000012748) Ggcx (ENSRNOG00000012975) Mat2a (ENSRNOG00000013520) Sh2d6 (ENSRNOG00000013605) Capg (ENSRNOG00000013668) Elmod3 (ENSRNOG00000038102) Retsat (ENSRNOG00000014090) Tgoln2 (ENSRNOG00000014617) Tcf7l1 (ENSRNOG00000014753) Kcmf1 (ENSRNOG00000015097) Tmsb10 (ENSRNOG00000064090) Dnah6 (ENSRNOG00000015581) Suclg1 (ENSRNOG00000005587) Jkampl (ENSRNOG00000024604) Ptbp1-ps3 (ENSRNOG00000070516) ENSRNOG00000071146 #22 ENSRNOG00000066158 Ctnna2 (ENSRNOG00000006003) LRRTM1 (ENSRNOG00000006093) Reg3b (ENSRNOG00000006151) Reg3a (ENSRNOG00000006360) Reg1a (ENSRNOG00000006486) Reg3g (ENSRNOG00000006579) Lrrtm4 (ENSRNOG00000021938) ENSRNOG00000064641 AABR07061254.1 (ENSRNOG00000038024) Gcfc2 (ENSRNOG00000006888) Mrpl19 (ENSRNOG00000006968) Eva1a (ENSRNOG00000007118) ENSRNOG00000063971 Tacr1 (ENSRNOG00000005853) Cricetidae ANCESTRAL SPECIES 8 ENSGT00390000013740 ENSGT00940000161383 ENSGT00940000160502 ENSGT00910000146917 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 ENSGT00390000003897.s.b.a.b.b ENSGT00950000182846.a.a.a.a.a ENSGT00390000018621 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a ENSGT00730000111022 #24 ENSGT00950000182808.b.b ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00410000025802.g.b.q.a ENSGT01100000263574.b.j ENSGT01050000244815.B.a.a ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Cricetinae ANCESTRAL SPECIES 46 ENSGT01050000244882.b.c.b ENSGT00950000182824.a.b.b ENSGT00550000074803 ENSGT00940000161383 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 ENSGT00940000153588.b ENSGT00390000002034 ENSGT00390000003897.s.b.a.b.b ENSGT00950000182846.a.a.a.a.a ENSGT00390000018621 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a ENSGT00730000111022 #24 ENSGT00950000182808.b.b ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT01050000244815.B.a.a ENSGT00410000025802.g.b.q.a ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f.db.b Chinese hamster chok1gshd MODERN SPECIES 16 Naa10 (ENSCGRG00001012595) Hcfc1 (ENSCGRG00001019535) Irak1 (ENSCGRG00001013928) ENSCGRG00001022957 Mecp2 (ENSCGRG00001017650) Opn1mw (ENSCGRG00001024157) Tex28 (ENSCGRG00001014288) ENSCGRG00001010950 Flna (ENSCGRG00001013154) Emd (ENSCGRG00001023962) ENSCGRG00001008387 DNASE1L1 (ENSCGRG00001019882) TAZ (ENSCGRG00001016189) Atp6ap1 (ENSCGRG00001015351) #20 Gdi1 (ENSCGRG00001020747) #21 Fam50a (ENSCGRG00001022147) #22 Plxna3 (ENSCGRG00001018950) #23 Lage3 (ENSCGRG00001006943) Ubl4a (ENSCGRG00001024649) #24 Fam3a (ENSCGRG00001017590) G6PDH (ENSCGRG00001009805) Ikbkg (ENSCGRG00001023852) Or7r1 (ENSCGRG00001002331) ENSCGRG00001018213 ENSCGRG00001000852 Gab3 (ENSCGRG00001024780) ENSCGRG00001014574 Mpp1 (ENSCGRG00001000334) Smim9 (ENSCGRG00001020847) F8 (ENSCGRG00001018172) Fundc2 (ENSCGRG00001005074) Golden Hamster MODERN SPECIES 857 L1cam (ENSMAUG00000008575) Avpr2 (ENSMAUG00000001098) Arhgap4 (ENSMAUG00000020011) Naa10 (ENSMAUG00000019021) Hcfc1 (ENSMAUG00000018495) Irak1 (ENSMAUG00000002430) Mecp2 (ENSMAUG00000018195) Opn1mw (ENSMAUG00000017549) Tex28 (ENSMAUG00000011775) Emd (ENSMAUG00000016655) ENSMAUG00000013615 Dnase1l1 (ENSMAUG00000005714) Tafazzin (ENSMAUG00000001836) Atp6ap1 (ENSMAUG00000014514) #20 Gdi1 (ENSMAUG00000001476) #21 Fam50a (ENSMAUG00000020359) #22 Plxna3 (ENSMAUG00000019645) #23 Lage3 (ENSMAUG00000021750) Ubl4a (ENSMAUG00000019612) #24 Slc10a3 (ENSMAUG00000005496) Fam3a (ENSMAUG00000009961) ENSMAUG00000008547 Ikbkg (ENSMAUG00000008491) Cricetidae_B ANCESTRAL SPECIES 28 ENSGT00390000013740 ENSGT00940000161383 ENSGT00940000160502 ENSGT00910000146917 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 ENSGT00390000003897.s.b.a.b.b ENSGT00950000182846.a.a.a.a.a ENSGT00390000018621 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a ENSGT00730000111022 #24 ENSGT00950000182808.b.b ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00410000025802.g.b.q.a ENSGT01100000263574.b.j ENSGT01050000244815.B.a.a ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Prairie vole MODERN SPECIES 168 ENSMOCG00000017630 Tex28 (ENSMOCG00000011491) Flna (ENSMOCG00000007826) Emd (ENSMOCG00000003977) ENSMOCG00000013831 Dnase1l1 (ENSMOCG00000017402) Tafazzin (ENSMOCG00000010108) Atp6ap1 (ENSMOCG00000001026) #20 Gdi1 (ENSMOCG00000006575) #21 Fam50a (ENSMOCG00000015890) #22 Plxna3 (ENSMOCG00000002375) #23 ENSMOCG00000002473 Ubl4a (ENSMOCG00000000785) #24 Slc10a3 (ENSMOCG00000008789) Fam3a (ENSMOCG00000016025) ENSMOCG00000015421 Ikbkg (ENSMOCG00000011244) ENSMOCG00000017711 Or7r1 (ENSMOCG00000002349) Gab3 (ENSMOCG00000015626) ENSMOCG00000001169 Mpp1 (ENSMOCG00000000082) Smim9 (ENSMOCG00000003619) ENSMOCG00000001114 F8 (ENSMOCG00000006178) Northern American deer mouse MODERN SPECIES 475 ENSPEMG00000010870 Hcfc1 (ENSPEMG00000011837) Irak1 (ENSPEMG00000001469) ENSPEMG00000025112 Mecp2 (ENSPEMG00000015115) Opn1mw (ENSPEMG00000010994) Tex28 (ENSPEMG00000009005) Tktl1 (ENSPEMG00000012644) Flna (ENSPEMG00000009562) Emd (ENSPEMG00000012081) ENSPEMG00000015703 Dnase1l1 (ENSPEMG00000013008) Tafazzin (ENSPEMG00000007822) Atp6ap1 (ENSPEMG00000009724) #20 Gdi1 (ENSPEMG00000010952) #21 Fam50a (ENSPEMG00000001727) #22 Plxna3 (ENSPEMG00000012781) #23 Lage3 (ENSPEMG00000011229) Ubl4a (ENSPEMG00000027881) #24 Fam3a (ENSPEMG00000004757) ENSPEMG00000017532 Ikbkg (ENSPEMG00000031110) ENSPEMG00000029875 ENSPEMG00000027888 ENSPEMG00000026245 Or7r1 (ENSPEMG00000009130) Or13ae2 (ENSPEMG00000025767) Gab3 (ENSPEMG00000012634) Dkc1 (ENSPEMG00000013348) ENSPEMG00000022395 Mpp1 (ENSPEMG00000014261) Upper Galilee mountains blind mole rat MODERN SPECIES 660 Arhgap4 (ENSNGAG00000015413) Naa10 (ENSNGAG00000020303) Renbp (ENSNGAG00000021686) Hcfc1 (ENSNGAG00000013083) Irak1 (ENSNGAG00000011647) Mecp2 (ENSNGAG00000009171) Opn1mw (ENSNGAG00000011604) Tex28 (ENSNGAG00000023701) Flna (ENSNGAG00000013524) Emd (ENSNGAG00000018770) ENSNGAG00000023746 Dnase1l1 (ENSNGAG00000024155) Tafazzin (ENSNGAG00000008680) Atp6ap1 (ENSNGAG00000021512) #20 Gdi1 (ENSNGAG00000023333) #21 Fam50a (ENSNGAG00000021495) #22 ENSNGAG00000012608 Plxna3 (ENSNGAG00000022548) #23 Lage3 (ENSNGAG00000023293) Ubl4a (ENSNGAG00000023782) #24 Slc10a3 (ENSNGAG00000007975) Fam3a (ENSNGAG00000016683) ENSNGAG00000020668 Ikbkg (ENSNGAG00000019535) ENSNGAG00000024034 Or13ae2 (ENSNGAG00000001537) Lesser Egyptian jerboa MODERN SPECIES 224 Naa10 (ENSJJAG00000023398) Renbp (ENSJJAG00000010739) Hcfc1 (ENSJJAG00000012815) Irak1 (ENSJJAG00000013849) Mecp2 (ENSJJAG00000022463) ENSJJAG00000022596 Opn1mw (ENSJJAG00000022699) Tex28 (ENSJJAG00000019769) Tktl1 (ENSJJAG00000010328) Flna (ENSJJAG00000015450) Emd (ENSJJAG00000019656) ENSJJAG00000014235 Tafazzin (ENSJJAG00000015233) ENSJJAG00000019557 #20 Gdi1 (ENSJJAG00000008815) #21 Fam50a (ENSJJAG00000010389) #22 Plxna3 (ENSJJAG00000020257) #23 Lage3 (ENSJJAG00000022478) ENSJJAG00000022788 #24 Slc10a3 (ENSJJAG00000022929) Fam3a (ENSJJAG00000023156) ENSJJAG00000023806 Ikbkg (ENSJJAG00000023964) Kangaroo rat MODERN SPECIES 526 Arhgap4 (ENSDORG00000002750) Naa10 (ENSDORG00000002753) Renbp (ENSDORG00000002755) Hcfc1 (ENSDORG00000002756) Irak1 (ENSDORG00000013876) Mecp2 (ENSDORG00000014978) Opn1mw (ENSDORG00000026454) Tex28 (ENSDORG00000010136) Tktl1 (ENSDORG00000013785) Emd (ENSDORG00000004375) Flna (ENSDORG00000004370) ENSDORG00000004369 Tafazzin (ENSDORG00000029677) Atp6ap1 (ENSDORG00000008847) #20 Gdi1 (ENSDORG00000008848) #21 Fam50a (ENSDORG00000008851) #22 Plxna3 (ENSDORG00000000853) #23 Lage3 (ENSDORG00000029875) Ubl4a (ENSDORG00000005196) #24 Slc10a3 (ENSDORG00000005197) Fam3a (ENSDORG00000025173) ENSDORG00000012731 Ikbkg (ENSDORG00000028140) ENSDORG00000000625 Gab3 (ENSDORG00000006809) ENSDORG00000013566 Mpp1 (ENSDORG00000013568) ENSDORG00000024019 F8 (ENSDORG00000013155) ENSDORG00000028874 Fundc2 (ENSDORG00000013156) Rodentia_A ANCESTRAL SPECIES 9 ENSGT00550000074803 ENSGT00390000013740 ENSGT00940000161383 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 ENSGT00390000003897.s.b.a.b.b ENSGT00950000182846.a.a.a.a.a ENSGT00390000018621 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a ENSGT00730000111022 #24 ENSGT00950000182808.b.b ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT01050000244815.B.a.a ENSGT00410000025802.g.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 Sciuridae ANCESTRAL SPECIES 27 ENSGT00550000074803 ENSGT00390000013740 ENSGT00940000161383 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 ENSGT00390000003897.s.b.a.b.b ENSGT00950000182846.a.a.a.a.a ENSGT00390000018621 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a ENSGT00730000111022 #24 ENSGT00950000182808.b.b ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT01050000244815.B.a.a Marmotini DUPLICATION Marmotini ANCESTRAL SPECIES 83 ENSGT00550000074803 ENSGT00390000013740 ENSGT00940000161383 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 ENSGT00390000003897.s.b.a.b.b ENSGT00950000182846.a.a.a.a.a ENSGT00390000018621 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A.e #22 ENSGT01050000244850.A.a #23 ENSGT00730000111022 #24 ENSGT00950000182808.b.b ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT01050000244815.B.a.a Alpin marmot MODERN SPECIES 136 ARHGAP4 (ENSMMMG00000008497) ENSMMMG00000009143 RENBP (ENSMMMG00000009149) HCFC1 (ENSMMMG00000009171) IRAK1 (ENSMMMG00000009239) MECP2 (ENSMMMG00000009970) ENSMMMG00000010010 TEX28 (ENSMMMG00000010023) TKTL1 (ENSMMMG00000010036) FLNA (ENSMMMG00000010080) EMD (ENSMMMG00000014270) ENSMMMG00000014279 DNASE1L1 (ENSMMMG00000014299) TAFAZZIN (ENSMMMG00000014302) GDI1 (ENSMMMG00000014475) #21 FAM50A (ENSMMMG00000014490) #22 PLXNA3 (ENSMMMG00000014513) #23 UBL4A (ENSMMMG00000014537) #24 SLC10A3 (ENSMMMG00000014545) FAM3A (ENSMMMG00000014550) G6PD (ENSMMMG00000014645) IKBKG (ENSMMMG00000014671) ENSMMMG00000014778 Marmotini_b ANCESTRAL SPECIES 124 ENSGT00550000074803 ENSGT00390000013740 ENSGT00940000161383 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 ENSGT00390000003897.s.b.a.b.b ENSGT00950000182846.a.a.a.a.a ENSGT00390000018621 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A.e #22 ENSGT01050000244850.A.a #23 ENSGT00730000111022 #24 ENSGT00950000182808.b.b ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT01050000244815.B.a.a Squirrel MODERN SPECIES 409 NAA10 (ENSSTOG00000010237) RENBP (ENSSTOG00000010247) HCFC1 (ENSSTOG00000029220) IRAK1 (ENSSTOG00000007991) MECP2 (ENSSTOG00000006094) ENSSTOG00000024701 TEX28 (ENSSTOG00000022078) TKTL1 (ENSSTOG00000005014) FLNA (ENSSTOG00000005036) EMD (ENSSTOG00000014689) ENSSTOG00000011857 DNASE1L1 (ENSSTOG00000011867) TAFAZZIN (ENSSTOG00000011873) ATP6AP1 (ENSSTOG00000004401) #20 GDI1 (ENSSTOG00000004429) #21 ENSSTOG00000004448 #22 PLXNA3 (ENSSTOG00000003432) #23 UBL4A (ENSSTOG00000022150) #24 SLC10A3 (ENSSTOG00000026515) FAM3A (ENSSTOG00000022234) IKBKG (ENSSTOG00000011082) G6PD (ENSSTOG00000021077) ENSSTOG00000027400 Arctic ground squirrel MODERN SPECIES 823 FLNA (ENSUPAG00010000336) EMD (ENSUPAG00010000276) ENSUPAG00010000252 DNASE1L1 (ENSUPAG00010000232) TAFAZZIN (ENSUPAG00010000055) ATP6AP1 (ENSUPAG00010011086) #20 GDI1 (ENSUPAG00010011085) #21 ENSUPAG00010011078 #22 PLXNA3 (ENSUPAG00010011001) #23 ENSUPAG00010010993 ENSUPAG00010010991 SLC10A3 (ENSUPAG00010010974) FAM3A (ENSUPAG00010010917) IKBKG (ENSUPAG00010010819) ENSUPAG00010010808 ENSUPAG00010010804 ENSUPAG00010010787 ENSUPAG00010010780 ENSUPAG00010010746 Marmotini ANCESTRAL SPECIES ENSGT00390000004735.A.f #22 Marmotini_b DUPLICATION Marmotini_b ANCESTRAL SPECIES ENSGT00390000004735.A.f.a #22 Squirrel DUPLICATION Squirrel MODERN SPECIES 430 ENSSTOG00000030695 #22 Squirrel MODERN SPECIES 538 ENSSTOG00000034161 #22 Arctic ground squirrel MODERN SPECIES 686 ENSUPAG00010003770 SLC25A24 (ENSUPAG00010003749) ENSUPAG00010003655 ENSUPAG00010003644 #22 Marmotini_b ANCESTRAL SPECIES ENSGT00390000004735.A.f.b #22 Squirrel MODERN SPECIES 331 PRMT6 (ENSSTOG00000010675) NTNG1 (ENSSTOG00000004945) VAV3 (ENSSTOG00000004968) SLC25A24 (ENSSTOG00000025446) ENSSTOG00000024778 ENSSTOG00000026658 #22 ENSSTOG00000020565 Arctic ground squirrel MODERN SPECIES 1104 ENSUPAG00010000264 #22 Eurasian red squirrel MODERN SPECIES 156 RENBP (ENSSVLG00005019023) HCFC1 (ENSSVLG00005018524) ENSSVLG00005018093 MECP2 (ENSSVLG00005017899) ENSSVLG00005017793 ENSSVLG00005017738 TEX28 (ENSSVLG00005017596) TKTL1 (ENSSVLG00005017318) EMD (ENSSVLG00005019520) FLNA (ENSSVLG00005018546) ENSSVLG00005018375 DNASE1L1 (ENSSVLG00005018343) TAFAZZIN (ENSSVLG00005018196) ATP6AP1 (ENSSVLG00005018016) #20 GDI1 (ENSSVLG00005017962) #21 FAM50A (ENSSVLG00005017921) #22 PLXNA3 (ENSSVLG00005017881) #23 LAGE3 (ENSSVLG00005017858) UBL4A (ENSSVLG00005017819) #24 SLC10A3 (ENSSVLG00005017774) FAM3A (ENSSVLG00005017584) G6PD (ENSSVLG00005017520) IKBKG (ENSSVLG00005017293) ENSSVLG00005017218 ENSSVLG00005017166 ENSSVLG00005017122 ENSSVLG00005017050 ENSSVLG00005016985 GAB3 (ENSSVLG00005016708) DKC1 (ENSSVLG00005016642) MPP1 (ENSSVLG00005016498) Lagomorpha ANCESTRAL SPECIES 103 ENSGT00950000182824.a.b.b ENSGT00550000074803 ENSGT00390000013740 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 ENSGT00390000018621 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a ENSGT00950000182808.b.b ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a Pika DUPLICATION Pika DUPLICATION Pika MODERN SPECIES 10627 ENSOPRG00000011292 #22 Pika MODERN SPECIES 5784 ENSOPRG00000014089 #22 Pika MODERN SPECIES 3089 ENSOPRG00000000215 #22 Rabbit MODERN SPECIES 549 NAA10 (ENSOCUG00000001111) RENBP (ENSOCUG00000025840) HCFC1 (ENSOCUG00000001113) TMEM187 (ENSOCUG00000001116) IRAK1 (ENSOCUG00000025860) MECP2 (ENSOCUG00000013147) OPN1MW (ENSOCUG00000011466) TEX28 (ENSOCUG00000021000) TKTL1 (ENSOCUG00000000883) FLNA (ENSOCUG00000000880) EMD (ENSOCUG00000000882) RA_m006_jsm7BED4f (ENSOCUG00000024511) TAFAZZIN (ENSOCUG00000000885) ENSOCUG00000017631 #20 GDI1 (ENSOCUG00000017639) #21 FAM50A (ENSOCUG00000017644) #22 PLXNA3 (ENSOCUG00000015623) #23 LAGE3 (ENSOCUG00000028990) SLC10A3 (ENSOCUG00000022433) FAM3A (ENSOCUG00000015663) G6PD (ENSOCUG00000007866) IKBKG (ENSOCUG00000007873)