Bilateria DUPLICATION Bilateria DUPLICATION Bilateria ANCESTRAL SPECIES ENSGT00390000004735.A #22 Chordata ANCESTRAL SPECIES ENSGT00390000004735.A #22 Vertebrata ANCESTRAL SPECIES ENSGT00390000004735.A #22 Gnathostomata ANCESTRAL SPECIES ENSGT00390000004735.A #22 Euteleostomi ANCESTRAL SPECIES ENSGT00390000004735.A #22 Sarcopterygii ANCESTRAL SPECIES ENSGT00390000004735.A #22 Tetrapoda ANCESTRAL SPECIES ENSGT00390000004735.A #22 Amniota ANCESTRAL SPECIES ENSGT00390000004735.A #22 Mammalia ANCESTRAL SPECIES ENSGT00390000004735.A #22 Theria ANCESTRAL SPECIES ENSGT00390000004735.A #22 Eutheria ANCESTRAL SPECIES ENSGT00390000004735.A #22 Boreoeutheria ANCESTRAL SPECIES 11 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00910000146917 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00410000025802.h ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.e.b ENSGT00940000163020 Euarchontoglires ANCESTRAL SPECIES 11 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00910000146917 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00410000025802.h ##24 ENSGT01030000238159 ENSGT01050000244815.B.a.a ENSGT00410000025802.g.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 Euarchontoglires_A ANCESTRAL SPECIES 11 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00910000146917 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00410000025802.g.b ##24 ENSGT01050000244815.B.a.a ENSGT00390000000062.x.b ENSGT00390000001700.a.b.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 Glires ANCESTRAL SPECIES 10 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00910000146917 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00410000025802.g.b ##24 ENSGT01050000244815.B.a.a ENSGT00390000000062.x.b ENSGT00390000001700.a.b.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 Rodentia ANCESTRAL SPECIES 10 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00940000160502 #12 ENSGT00910000146917 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00410000025802.g.b ##24 ENSGT01050000244815.B.a.a ENSGT00390000000062.x.b ENSGT00390000001700.a.b.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 Rodentia_B ANCESTRAL SPECIES 16 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00940000160502 #12 ENSGT00910000146917 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00410000025802.g.b ##24 ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Myomorpha ANCESTRAL SPECIES 6 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00940000160502 #12 ENSGT00910000146917 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00410000025802.g.b ##24 ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Muroidea ANCESTRAL SPECIES 13 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00940000160502 #12 ENSGT00910000146917 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00410000025802.g.b ##24 ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Muroidea_A ANCESTRAL SPECIES 7 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00940000160502 #12 ENSGT00910000146917 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00410000025802.g.b.q.a ##24 ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Cricetidae ANCESTRAL SPECIES 8 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00940000160502 #12 ENSGT00910000146917 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00410000025802.g.b.q.a ##24 ENSGT01100000263574.b.j ENSGT01050000244815.B.a.a ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Cricetinae ANCESTRAL SPECIES 46 ENSGT01050000244882.b.c.b #8 ENSGT00950000182824.a.b.b #9 ENSGT00550000074803 #10 ENSGT00940000161383 #11 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT01050000244815.B.a.a ENSGT00410000025802.g.b.q.a ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f.db.b Golden Hamster MODERN SPECIES 857 L1cam (ENSMAUG00000008575) #7 Avpr2 (ENSMAUG00000001098) #8 Arhgap4 (ENSMAUG00000020011) #9 Naa10 (ENSMAUG00000019021) #10 Hcfc1 (ENSMAUG00000018495) #11 Irak1 (ENSMAUG00000002430) #12 Mecp2 (ENSMAUG00000018195) #13 Opn1mw (ENSMAUG00000017549) #14 Tex28 (ENSMAUG00000011775) #15 Emd (ENSMAUG00000016655) #16 ENSMAUG00000013615 #17 Dnase1l1 (ENSMAUG00000005714) #18 Tafazzin (ENSMAUG00000001836) #19 Atp6ap1 (ENSMAUG00000014514) #20 Gdi1 (ENSMAUG00000001476) #21 Fam50a (ENSMAUG00000020359) #22 Plxna3 (ENSMAUG00000019645) #23 Lage3 (ENSMAUG00000021750) #24 Ubl4a (ENSMAUG00000019612) #25 Slc10a3 (ENSMAUG00000005496) #26 Fam3a (ENSMAUG00000009961) #27 ENSMAUG00000008547 #28 Ikbkg (ENSMAUG00000008491) #29 Chinese hamster chok1gshd MODERN SPECIES 16 Naa10 (ENSCGRG00001012595) #10 Hcfc1 (ENSCGRG00001019535) #11 Irak1 (ENSCGRG00001013928) #12 ENSCGRG00001022957 Mecp2 (ENSCGRG00001017650) #13 Opn1mw (ENSCGRG00001024157) #14 Tex28 (ENSCGRG00001014288) #15 ENSCGRG00001010950 Flna (ENSCGRG00001013154) Emd (ENSCGRG00001023962) #16 ENSCGRG00001008387 #17 DNASE1L1 (ENSCGRG00001019882) #18 TAZ (ENSCGRG00001016189) #19 Atp6ap1 (ENSCGRG00001015351) #20 Gdi1 (ENSCGRG00001020747) #21 Fam50a (ENSCGRG00001022147) #22 Plxna3 (ENSCGRG00001018950) #23 Lage3 (ENSCGRG00001006943) #24 Ubl4a (ENSCGRG00001024649) #25 Fam3a (ENSCGRG00001017590) #27 G6PDH (ENSCGRG00001009805) #28 Ikbkg (ENSCGRG00001023852) #29 Or7r1 (ENSCGRG00001002331) ENSCGRG00001018213 ENSCGRG00001000852 ##24 Gab3 (ENSCGRG00001024780) ENSCGRG00001014574 Mpp1 (ENSCGRG00001000334) Smim9 (ENSCGRG00001020847) F8 (ENSCGRG00001018172) Fundc2 (ENSCGRG00001005074) Cricetidae_B ANCESTRAL SPECIES 28 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00940000160502 #12 ENSGT00910000146917 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00410000025802.g.b.q.a ##24 ENSGT01100000263574.b.j ENSGT01050000244815.B.a.a ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Prairie vole MODERN SPECIES 168 ENSMOCG00000017630 #14 Tex28 (ENSMOCG00000011491) #15 Flna (ENSMOCG00000007826) Emd (ENSMOCG00000003977) #16 ENSMOCG00000013831 #17 Dnase1l1 (ENSMOCG00000017402) #18 Tafazzin (ENSMOCG00000010108) #19 Atp6ap1 (ENSMOCG00000001026) #20 Gdi1 (ENSMOCG00000006575) #21 Fam50a (ENSMOCG00000015890) #22 Plxna3 (ENSMOCG00000002375) #23 ENSMOCG00000002473 #24 Ubl4a (ENSMOCG00000000785) #25 Slc10a3 (ENSMOCG00000008789) #26 Fam3a (ENSMOCG00000016025) #27 ENSMOCG00000015421 #28 Ikbkg (ENSMOCG00000011244) #29 ENSMOCG00000017711 ##24 Or7r1 (ENSMOCG00000002349) Gab3 (ENSMOCG00000015626) ENSMOCG00000001169 Mpp1 (ENSMOCG00000000082) Smim9 (ENSMOCG00000003619) ENSMOCG00000001114 F8 (ENSMOCG00000006178) Northern American deer mouse MODERN SPECIES 475 ENSPEMG00000010870 Hcfc1 (ENSPEMG00000011837) #11 Irak1 (ENSPEMG00000001469) #12 ENSPEMG00000025112 Mecp2 (ENSPEMG00000015115) #13 Opn1mw (ENSPEMG00000010994) #14 Tex28 (ENSPEMG00000009005) #15 Tktl1 (ENSPEMG00000012644) Flna (ENSPEMG00000009562) Emd (ENSPEMG00000012081) #16 ENSPEMG00000015703 ##17 Dnase1l1 (ENSPEMG00000013008) #18 Tafazzin (ENSPEMG00000007822) #19 Atp6ap1 (ENSPEMG00000009724) #20 Gdi1 (ENSPEMG00000010952) #21 Fam50a (ENSPEMG00000001727) #22 Plxna3 (ENSPEMG00000012781) #23 Lage3 (ENSPEMG00000011229) #24 Ubl4a (ENSPEMG00000027881) #25 Fam3a (ENSPEMG00000004757) #27 ENSPEMG00000017532 #28 Ikbkg (ENSPEMG00000031110) #29 ENSPEMG00000029875 ##24 ENSPEMG00000027888 ##24 ENSPEMG00000026245 ##24 Or7r1 (ENSPEMG00000009130) Or13ae2 (ENSPEMG00000025767) Gab3 (ENSPEMG00000012634) Dkc1 (ENSPEMG00000013348) ENSPEMG00000022395 #10 Mpp1 (ENSPEMG00000014261) Murinae ANCESTRAL SPECIES 14 ENSGT00550000074803 #10 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00410000025802.g.b.q.a ##24 ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00390000016992 ENSGT00390000000062.x.b.k.b ENSGT00390000000062.x.b.l.b ENSGT00390000001700.a.b.b ENSGT00940000159803 Mus ANCESTRAL SPECIES 9 ENSGT00550000074803 #10 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a.o #28 ENSGT00530000063808.a #29 ENSGT00410000025802.g.b.q.a ##24 ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Mus_A ANCESTRAL SPECIES 15 ENSGT00550000074803 #10 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a.o #28 ENSGT00530000063808.a #29 ENSGT00410000025802.g.b.q.a ##24 ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00390000000062.x.b.k.b ENSGT00390000000062.x.b.l.b ENSGT00390000001700.a.b.b ENSGT00940000159803 ENSGT00510000047092 Mus_B ANCESTRAL SPECIES 14 ENSGT00550000074803 #10 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a.o #28 ENSGT00530000063808.a #29 ENSGT00410000025802.g.b.q.a ##24 ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00390000001700.a.b.b.o.a ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 Mus_C ANCESTRAL SPECIES 27 ENSGT00550000074803 #10 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a.o #28 ENSGT00530000063808.a #29 ENSGT00410000025802.g.b.q.a ##24 ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f spretus MODERN SPECIES 19 Naa10 (MGP_SPRETEiJ_G0034321) #10 Renbp (MGP_SPRETEiJ_G0034322) Hcfc1 (MGP_SPRETEiJ_G0034323) #11 Irak1 (MGP_SPRETEiJ_G0034324) #12 Mecp2 (MGP_SPRETEiJ_G0034325) #13 Opn1mw (MGP_SPRETEiJ_G0034326) #14 Tex28 (MGP_SPRETEiJ_G0034327) #15 Tktl1 (MGP_SPRETEiJ_G0034328) Flna (MGP_SPRETEiJ_G0034329) Emd (MGP_SPRETEiJ_G0034330) #16 MGP_SPRETEiJ_G0034331 #17 Dnase1l1 (MGP_SPRETEiJ_G0034332) #18 Tafazzin (MGP_SPRETEiJ_G0034333) #19 Atp6ap1 (MGP_SPRETEiJ_G0034334) #20 Gdi1 (MGP_SPRETEiJ_G0034335) #21 Fam50a (MGP_SPRETEiJ_G0034336) #22 Plxna3 (MGP_SPRETEiJ_G0034337) #23 Lage3 (MGP_SPRETEiJ_G0034338) #24 Ubl4a (MGP_SPRETEiJ_G0034339) #25 Slc10a3 (MGP_SPRETEiJ_G0034340) #26 Fam3a (MGP_SPRETEiJ_G0034341) #27 Ikbkg (MGP_SPRETEiJ_G0034342) #29 G6pdx (MGP_SPRETEiJ_G0034343) #28 MGP_SPRETEiJ_G0034344 ##24 Or7r1 (MGP_SPRETEiJ_G0034345) Or13ae2 (MGP_SPRETEiJ_G0034346) MGP_SPRETEiJ_G0034347 MGP_SPRETEiJ_G0034348 ##24 Dkc1 (MGP_SPRETEiJ_G0034351) Mpp1 (MGP_SPRETEiJ_G0034352) Smim9 (MGP_SPRETEiJ_G0034353) Steppe mouse MODERN SPECIES 1762 ENSMSIG00000025685 #20 Gdi1 (ENSMSIG00000025652) #21 Fam50a (ENSMSIG00000025621) #22 Plxna3 (ENSMSIG00000025574) #23 Ubl4a (ENSMSIG00000025541) #25 Mouse MODERN SPECIES 37 Naa10 (ENSMUSG00000031388) #10 Renbp (ENSMUSG00000031387) Hcfc1 (ENSMUSG00000031386) #11 Irak1 (ENSMUSG00000031392) #12 Mecp2 (ENSMUSG00000031393) #13 Opn1mw (ENSMUSG00000031394) #14 Tex28 (ENSMUSG00000062564) #15 Tktl1 (ENSMUSG00000031397) Flna (ENSMUSG00000031328) Emd (ENSMUSG00000001964) #16 Rpl10 (ENSMUSG00000008682) ##17 Dnase1l1 (ENSMUSG00000019088) #18 Tafazzin (ENSMUSG00000009995) #19 Atp6ap1 (ENSMUSG00000019087) #20 Gdi1 (ENSMUSG00000015291) #21 Fam50a (ENSMUSG00000001962) #22 Plxna3 (ENSMUSG00000031398) #23 Lage3 (ENSMUSG00000015289) #24 Ubl4a (ENSMUSG00000015290) #25 Slc10a3 (ENSMUSG00000032806) #26 Fam3a (ENSMUSG00000031399) #27 Ikbkg (ENSMUSG00000004221) #29 G6pdx (ENSMUSG00000031400) #28 Ctag2l1 (ENSMUSG00000079536) ##24 Or7r1 (ENSMUSG00000043715) Or13ae2 (ENSMUSG00000051706) Pwwp4c (ENSMUSG00000079534) Ctag2l2 (ENSMUSG00000079532) ##24 Pwwp4d (ENSMUSG00000079531) Gab3 (ENSMUSG00000032750) Dkc1 (ENSMUSG00000031403) Ryukyu mouse MODERN SPECIES 19 Naa10 (MGP_CAROLIEiJ_G0033166) #10 Renbp (MGP_CAROLIEiJ_G0033167) Hcfc1 (MGP_CAROLIEiJ_G0033168) #11 Irak1 (MGP_CAROLIEiJ_G0033169) #12 Mecp2 (MGP_CAROLIEiJ_G0033170) #13 Opn1mw (MGP_CAROLIEiJ_G0033171) #14 Tex28 (MGP_CAROLIEiJ_G0033172) #15 Tktl1 (MGP_CAROLIEiJ_G0033173) Flna (MGP_CAROLIEiJ_G0033174) Emd (MGP_CAROLIEiJ_G0033175) #16 MGP_CAROLIEiJ_G0033176 ##17 Dnase1l1 (MGP_CAROLIEiJ_G0033177) #18 Tafazzin (MGP_CAROLIEiJ_G0033178) #19 Atp6ap1 (MGP_CAROLIEiJ_G0033179) #20 Gdi1 (MGP_CAROLIEiJ_G0033180) #21 Fam50a (MGP_CAROLIEiJ_G0033181) #22 Plxna3 (MGP_CAROLIEiJ_G0033182) #23 Lage3 (MGP_CAROLIEiJ_G0033183) #24 Ubl4a (MGP_CAROLIEiJ_G0033184) #25 Slc10a3 (MGP_CAROLIEiJ_G0033185) #26 Fam3a (MGP_CAROLIEiJ_G0033186) #27 Ikbkg (MGP_CAROLIEiJ_G0033187) #29 G6pdx (MGP_CAROLIEiJ_G0033188) #28 Or7r1 (MGP_CAROLIEiJ_G0033189) Or13ae2 (MGP_CAROLIEiJ_G0033190) Dkc1 (MGP_CAROLIEiJ_G0033191) Mpp1 (MGP_CAROLIEiJ_G0033192) Smim9 (MGP_CAROLIEiJ_G0033193) F8 (MGP_CAROLIEiJ_G0033194) Fundc2 (MGP_CAROLIEiJ_G0033195) Cmc4 (MGP_CAROLIEiJ_G0033196) Shrew mouse MODERN SPECIES 23 Naa10 (MGP_PahariEiJ_G0031709) #10 Renbp (MGP_PahariEiJ_G0031710) Hcfc1 (MGP_PahariEiJ_G0031711) #11 Irak1 (MGP_PahariEiJ_G0031712) #12 Mecp2 (MGP_PahariEiJ_G0031713) #13 Opn1mw (MGP_PahariEiJ_G0031714) #14 Tex28 (MGP_PahariEiJ_G0031715) #15 MGP_PahariEiJ_G0031716 Flna (MGP_PahariEiJ_G0031717) Emd (MGP_PahariEiJ_G0031718) #16 MGP_PahariEiJ_G0031719 ##17 Dnase1l1 (MGP_PahariEiJ_G0031720) #18 Tafazzin (MGP_PahariEiJ_G0031721) #19 Atp6ap1 (MGP_PahariEiJ_G0031722) #20 Gdi1 (MGP_PahariEiJ_G0031723) #21 Fam50a (MGP_PahariEiJ_G0031724) #22 Plxna3 (MGP_PahariEiJ_G0031725) #23 Lage3 (MGP_PahariEiJ_G0031726) #24 Ubl4a (MGP_PahariEiJ_G0031727) #25 Slc10a3 (MGP_PahariEiJ_G0031728) #26 Fam3a (MGP_PahariEiJ_G0031729) #27 Ikbkg (MGP_PahariEiJ_G0031730) #29 G6pdx (MGP_PahariEiJ_G0031731) #28 Or7r1 (MGP_PahariEiJ_G0031732) Or13ae2 (MGP_PahariEiJ_G0031733) Gab3 (MGP_PahariEiJ_G0031734) Dkc1 (MGP_PahariEiJ_G0031735) Mpp1 (MGP_PahariEiJ_G0031736) Smim9 (MGP_PahariEiJ_G0031737) F8 (MGP_PahariEiJ_G0031738) Fundc2 (MGP_PahariEiJ_G0031739) Rat DUPLICATION Rat MODERN SPECIES 46 Renbp (ENSRNOG00000054765) Hcfc1 (ENSRNOG00000051948) #11 Irak1 (ENSRNOG00000060869) #12 Mecp2 (ENSRNOG00000056659) #13 Opn1mw (ENSRNOG00000051529) #14 Tex28 (ENSRNOG00000051438) #15 Tktl1 (ENSRNOG00000055557) Flna (ENSRNOG00000054890) Emd (ENSRNOG00000058882) #16 Rpl10 (ENSRNOG00000056765) #17 Dnase1l1 (ENSRNOG00000055641) #18 ENSRNOG00000063225 Tafazzin (ENSRNOG00000053023) #19 Atp6ap1 (ENSRNOG00000054352) #20 Gdi1 (ENSRNOG00000056870) #21 Fam50a (ENSRNOG00000058439) #22 Plxna3 (ENSRNOG00000060464) #23 Lage3 (ENSRNOG00000053456) Slc10a3 (ENSRNOG00000060580) #26 Ubl4a (ENSRNOG00000053061) #25 Fam3a (ENSRNOG00000060623) #27 G6pd (ENSRNOG00000056728) #28 Ikbkg (ENSRNOG00000060936) #29 LOC690348 (ENSRNOG00000060839) ##24 Or7r1 (ENSRNOG00000058820) LOC120099253 (ENSRNOG00000061511) ##24 ENSRNOG00000067246 Rat MODERN SPECIES 14 Vamp8 (ENSRNOG00000012748) Ggcx (ENSRNOG00000012975) Mat2a (ENSRNOG00000013520) Sh2d6 (ENSRNOG00000013605) Capg (ENSRNOG00000013668) Elmod3 (ENSRNOG00000038102) Retsat (ENSRNOG00000014090) Tgoln2 (ENSRNOG00000014617) Tcf7l1 (ENSRNOG00000014753) Kcmf1 (ENSRNOG00000015097) Tmsb10 (ENSRNOG00000064090) Dnah6 (ENSRNOG00000015581) Suclg1 (ENSRNOG00000005587) Jkampl (ENSRNOG00000024604) Ptbp1-ps3 (ENSRNOG00000070516) ENSRNOG00000071146 #22 ENSRNOG00000066158 Ctnna2 (ENSRNOG00000006003) LRRTM1 (ENSRNOG00000006093) Reg3b (ENSRNOG00000006151) Reg3a (ENSRNOG00000006360) Reg1a (ENSRNOG00000006486) Reg3g (ENSRNOG00000006579) Lrrtm4 (ENSRNOG00000021938) ENSRNOG00000064641 AABR07061254.1 (ENSRNOG00000038024) Gcfc2 (ENSRNOG00000006888) Mrpl19 (ENSRNOG00000006968) Eva1a (ENSRNOG00000007118) ENSRNOG00000063971 Tacr1 (ENSRNOG00000005853) Upper Galilee mountains blind mole rat MODERN SPECIES 660 Arhgap4 (ENSNGAG00000015413) #9 Naa10 (ENSNGAG00000020303) #10 Renbp (ENSNGAG00000021686) Hcfc1 (ENSNGAG00000013083) #11 Irak1 (ENSNGAG00000011647) #12 Mecp2 (ENSNGAG00000009171) #13 Opn1mw (ENSNGAG00000011604) #14 Tex28 (ENSNGAG00000023701) #15 Flna (ENSNGAG00000013524) Emd (ENSNGAG00000018770) #16 ENSNGAG00000023746 #17 Dnase1l1 (ENSNGAG00000024155) #18 Tafazzin (ENSNGAG00000008680) #19 Atp6ap1 (ENSNGAG00000021512) #20 Gdi1 (ENSNGAG00000023333) #21 Fam50a (ENSNGAG00000021495) #22 ENSNGAG00000012608 Plxna3 (ENSNGAG00000022548) #23 Lage3 (ENSNGAG00000023293) #24 Ubl4a (ENSNGAG00000023782) #25 Slc10a3 (ENSNGAG00000007975) #26 Fam3a (ENSNGAG00000016683) #27 ENSNGAG00000020668 #28 Ikbkg (ENSNGAG00000019535) #29 ENSNGAG00000024034 ##24 Or13ae2 (ENSNGAG00000001537) Lesser Egyptian jerboa MODERN SPECIES 224 Naa10 (ENSJJAG00000023398) #10 Renbp (ENSJJAG00000010739) Hcfc1 (ENSJJAG00000012815) #11 Irak1 (ENSJJAG00000013849) #12 Mecp2 (ENSJJAG00000022463) #13 ENSJJAG00000022596 Opn1mw (ENSJJAG00000022699) #14 Tex28 (ENSJJAG00000019769) #15 Tktl1 (ENSJJAG00000010328) Flna (ENSJJAG00000015450) Emd (ENSJJAG00000019656) #16 ENSJJAG00000014235 ##17 Tafazzin (ENSJJAG00000015233) #19 ENSJJAG00000019557 #20 Gdi1 (ENSJJAG00000008815) #21 Fam50a (ENSJJAG00000010389) #22 Plxna3 (ENSJJAG00000020257) #23 Lage3 (ENSJJAG00000022478) #24 ENSJJAG00000022788 #25 Slc10a3 (ENSJJAG00000022929) #26 Fam3a (ENSJJAG00000023156) #27 ENSJJAG00000023806 #28 Ikbkg (ENSJJAG00000023964) #29 Kangaroo rat MODERN SPECIES 526 Arhgap4 (ENSDORG00000002750) #9 Naa10 (ENSDORG00000002753) #10 Renbp (ENSDORG00000002755) Hcfc1 (ENSDORG00000002756) #11 Irak1 (ENSDORG00000013876) #12 Mecp2 (ENSDORG00000014978) #13 Opn1mw (ENSDORG00000026454) #14 Tex28 (ENSDORG00000010136) #15 Tktl1 (ENSDORG00000013785) Emd (ENSDORG00000004375) #16 Flna (ENSDORG00000004370) ENSDORG00000004369 #17 Tafazzin (ENSDORG00000029677) #19 Atp6ap1 (ENSDORG00000008847) #20 Gdi1 (ENSDORG00000008848) #21 Fam50a (ENSDORG00000008851) #22 Plxna3 (ENSDORG00000000853) #23 Lage3 (ENSDORG00000029875) #24 Ubl4a (ENSDORG00000005196) #25 Slc10a3 (ENSDORG00000005197) #26 Fam3a (ENSDORG00000025173) #27 ENSDORG00000012731 #28 Ikbkg (ENSDORG00000028140) #29 ENSDORG00000000625 ##24 Gab3 (ENSDORG00000006809) ENSDORG00000013566 Mpp1 (ENSDORG00000013568) ENSDORG00000024019 F8 (ENSDORG00000013155) ENSDORG00000028874 Fundc2 (ENSDORG00000013156) Rodentia_A ANCESTRAL SPECIES 9 ENSGT00550000074803 #10 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT01050000244815.B.a.a ENSGT00410000025802.g.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 Sciuridae ANCESTRAL SPECIES 27 ENSGT00550000074803 #10 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT01050000244815.B.a.a Marmotini DUPLICATION Marmotini ANCESTRAL SPECIES 83 ENSGT00550000074803 #10 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A.e #22 ENSGT01050000244850.A.a #23 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT01050000244815.B.a.a Alpin marmot MODERN SPECIES 136 ARHGAP4 (ENSMMMG00000008497) #9 ENSMMMG00000009143 #10 RENBP (ENSMMMG00000009149) HCFC1 (ENSMMMG00000009171) #11 IRAK1 (ENSMMMG00000009239) #12 MECP2 (ENSMMMG00000009970) #13 ENSMMMG00000010010 #14 TEX28 (ENSMMMG00000010023) #15 TKTL1 (ENSMMMG00000010036) FLNA (ENSMMMG00000010080) EMD (ENSMMMG00000014270) #16 ENSMMMG00000014279 #17 DNASE1L1 (ENSMMMG00000014299) #18 TAFAZZIN (ENSMMMG00000014302) #19 GDI1 (ENSMMMG00000014475) #21 FAM50A (ENSMMMG00000014490) #22 PLXNA3 (ENSMMMG00000014513) #23 UBL4A (ENSMMMG00000014537) #25 SLC10A3 (ENSMMMG00000014545) #26 FAM3A (ENSMMMG00000014550) #27 G6PD (ENSMMMG00000014645) #28 IKBKG (ENSMMMG00000014671) #29 ENSMMMG00000014778 Marmotini_b ANCESTRAL SPECIES 124 ENSGT00550000074803 #10 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A.e #22 ENSGT01050000244850.A.a #23 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT01050000244815.B.a.a Squirrel MODERN SPECIES 409 NAA10 (ENSSTOG00000010237) #10 RENBP (ENSSTOG00000010247) HCFC1 (ENSSTOG00000029220) #11 IRAK1 (ENSSTOG00000007991) #12 MECP2 (ENSSTOG00000006094) #13 ENSSTOG00000024701 #14 TEX28 (ENSSTOG00000022078) #15 TKTL1 (ENSSTOG00000005014) FLNA (ENSSTOG00000005036) EMD (ENSSTOG00000014689) #16 ENSSTOG00000011857 #17 DNASE1L1 (ENSSTOG00000011867) #18 TAFAZZIN (ENSSTOG00000011873) #19 ATP6AP1 (ENSSTOG00000004401) #20 GDI1 (ENSSTOG00000004429) #21 ENSSTOG00000004448 #22 PLXNA3 (ENSSTOG00000003432) #23 UBL4A (ENSSTOG00000022150) #25 SLC10A3 (ENSSTOG00000026515) #26 FAM3A (ENSSTOG00000022234) #27 IKBKG (ENSSTOG00000011082) #29 G6PD (ENSSTOG00000021077) #28 ENSSTOG00000027400 Arctic ground squirrel MODERN SPECIES 823 FLNA (ENSUPAG00010000336) EMD (ENSUPAG00010000276) #16 ENSUPAG00010000252 ##17 DNASE1L1 (ENSUPAG00010000232) #18 TAFAZZIN (ENSUPAG00010000055) #19 ATP6AP1 (ENSUPAG00010011086) #20 GDI1 (ENSUPAG00010011085) #21 ENSUPAG00010011078 #22 PLXNA3 (ENSUPAG00010011001) #23 ENSUPAG00010010993 ENSUPAG00010010991 #24 SLC10A3 (ENSUPAG00010010974) #26 FAM3A (ENSUPAG00010010917) #27 IKBKG (ENSUPAG00010010819) #29 ENSUPAG00010010808 ENSUPAG00010010804 ENSUPAG00010010787 ENSUPAG00010010780 ##24 ENSUPAG00010010746 ##24 Marmotini ANCESTRAL SPECIES ENSGT00390000004735.A.f #22 Marmotini_b DUPLICATION Marmotini_b ANCESTRAL SPECIES ENSGT00390000004735.A.f.a #22 Squirrel DUPLICATION Squirrel MODERN SPECIES 430 ENSSTOG00000030695 #22 Squirrel MODERN SPECIES 538 ENSSTOG00000034161 #22 Arctic ground squirrel MODERN SPECIES 686 ENSUPAG00010003770 SLC25A24 (ENSUPAG00010003749) ENSUPAG00010003655 ENSUPAG00010003644 #22 Marmotini_b ANCESTRAL SPECIES ENSGT00390000004735.A.f.b #22 Squirrel MODERN SPECIES 331 PRMT6 (ENSSTOG00000010675) NTNG1 (ENSSTOG00000004945) VAV3 (ENSSTOG00000004968) SLC25A24 (ENSSTOG00000025446) ENSSTOG00000024778 ENSSTOG00000026658 #22 ENSSTOG00000020565 Arctic ground squirrel MODERN SPECIES 1104 ENSUPAG00010000264 #22 Eurasian red squirrel MODERN SPECIES 156 RENBP (ENSSVLG00005019023) HCFC1 (ENSSVLG00005018524) #11 ENSSVLG00005018093 #12 MECP2 (ENSSVLG00005017899) #13 ENSSVLG00005017793 #14 ENSSVLG00005017738 TEX28 (ENSSVLG00005017596) #15 TKTL1 (ENSSVLG00005017318) EMD (ENSSVLG00005019520) #16 FLNA (ENSSVLG00005018546) ENSSVLG00005018375 #17 DNASE1L1 (ENSSVLG00005018343) #18 TAFAZZIN (ENSSVLG00005018196) #19 ATP6AP1 (ENSSVLG00005018016) #20 GDI1 (ENSSVLG00005017962) #21 FAM50A (ENSSVLG00005017921) #22 PLXNA3 (ENSSVLG00005017881) #23 LAGE3 (ENSSVLG00005017858) #24 UBL4A (ENSSVLG00005017819) #25 SLC10A3 (ENSSVLG00005017774) #26 FAM3A (ENSSVLG00005017584) #27 G6PD (ENSSVLG00005017520) #28 IKBKG (ENSSVLG00005017293) #29 ENSSVLG00005017218 ENSSVLG00005017166 ENSSVLG00005017122 ENSSVLG00005017050 ##24 ENSSVLG00005016985 GAB3 (ENSSVLG00005016708) DKC1 (ENSSVLG00005016642) MPP1 (ENSSVLG00005016498) Lagomorpha ANCESTRAL SPECIES 103 ENSGT00950000182824.a.b.b #9 ENSGT00550000074803 #10 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 Pika DUPLICATION Pika DUPLICATION Pika MODERN SPECIES 10627 ENSOPRG00000011292 #22 Pika MODERN SPECIES 5784 ENSOPRG00000014089 #22 Pika MODERN SPECIES 3089 ENSOPRG00000000215 #22 Rabbit MODERN SPECIES 549 NAA10 (ENSOCUG00000001111) #10 RENBP (ENSOCUG00000025840) HCFC1 (ENSOCUG00000001113) #11 TMEM187 (ENSOCUG00000001116) IRAK1 (ENSOCUG00000025860) #12 MECP2 (ENSOCUG00000013147) #13 OPN1MW (ENSOCUG00000011466) #14 TEX28 (ENSOCUG00000021000) #15 TKTL1 (ENSOCUG00000000883) FLNA (ENSOCUG00000000880) EMD (ENSOCUG00000000882) #16 RA_m006_jsm7BED4f (ENSOCUG00000024511) TAFAZZIN (ENSOCUG00000000885) #19 ENSOCUG00000017631 #20 GDI1 (ENSOCUG00000017639) #21 FAM50A (ENSOCUG00000017644) #22 PLXNA3 (ENSOCUG00000015623) #23 LAGE3 (ENSOCUG00000028990) #24 SLC10A3 (ENSOCUG00000022433) #26 FAM3A (ENSOCUG00000015663) #27 G6PD (ENSOCUG00000007866) #28 IKBKG (ENSOCUG00000007873) #29 Tree shrew MODERN SPECIES 5638 ATP6AP1 (ENSTBEG00000012179) #20 GDI1 (ENSTBEG00000012540) #21 FAM50A (ENSTBEG00000012739) #22 Primates ANCESTRAL SPECIES 23 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00910000146917 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00410000025802.h ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.e.b ENSGT00940000163020 Strepsirrhini ANCESTRAL SPECIES 45 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 Lemuriformes ANCESTRAL SPECIES 60 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 Mouse lemur MODERN SPECIES 169 F8 (ENSMICG00000029671) ENSMICG00000037635 ENSMICG00000009653 ENSMICG00000048060 SMIM9 (ENSMICG00000043321) MPP1 (ENSMICG00000002828) ENSMICG00000002818 GAB3 (ENSMICG00000000264) FLNA (ENSMICG00000004663) EMD (ENSMICG00000004682) #16 ENSMICG00000033705 #17 DNASE1L1 (ENSMICG00000035242) #18 TAFAZZIN (ENSMICG00000030766) #19 ATP6AP1 (ENSMICG00000016405) #20 GDI1 (ENSMICG00000016418) #21 FAM50A (ENSMICG00000016428) #22 PLXNA3 (ENSMICG00000016439) #23 UBL4A (ENSMICG00000016459) #25 SLC10A3 (ENSMICG00000016468) #26 FAM3A (ENSMICG00000016470) #27 G6PD (ENSMICG00000016481) #28 IKBKG (ENSMICG00000035937) #29 ENSMICG00000031449 ENSMICG00000041505 ##24 ENSMICG00000028378 ENSMICG00000045052 ENSMICG00000043299 ENSMICG00000044078 ENSMICG00000043090 CXorf66 (ENSMICG00000042583) ATP11C (ENSMICG00000017620) Lemuriformes_a ANCESTRAL SPECIES 110 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 Coquerels sifaka DUPLICATION Coquerels sifaka MODERN SPECIES 919 ADRA1A (ENSPCOG00000028770) DPYSL2 (ENSPCOG00000027797) BNIP3L (ENSPCOG00000026018) PPP2R2A (ENSPCOG00000023269) EBF2 (ENSPCOG00000027078) CDCA2 (ENSPCOG00000023393) KCTD9 (ENSPCOG00000020414) GNRH1 (ENSPCOG00000024165) DOCK5 (ENSPCOG00000016268) NEFL (ENSPCOG00000026085) NEFM (ENSPCOG00000022965) ADAM7 (ENSPCOG00000026532) ENSPCOG00000021910 ENSPCOG00000008142 STC1 (ENSPCOG00000019531) ENSPCOG00000026813 #22 NKX2-6 (ENSPCOG00000021761) NKX3-1 (ENSPCOG00000024990) SLC25A37 (ENSPCOG00000028846) ENTPD4 (ENSPCOG00000010184) LOXL2 (ENSPCOG00000022542) R3HCC1 (ENSPCOG00000027554) CHMP7 (ENSPCOG00000007383) ENSPCOG00000000697 RHOBTB2 (ENSPCOG00000015995) PEBP4 (ENSPCOG00000021149) EGR3 (ENSPCOG00000014614) ENSPCOG00000021166 BIN3 (ENSPCOG00000007346) CCAR2 (ENSPCOG00000023051) C8orf58 (ENSPCOG00000019584) Coquerels sifaka MODERN SPECIES 882 ENSPCOG00000027024 #10 RENBP (ENSPCOG00000013414) HCFC1 (ENSPCOG00000028065) #11 TMEM187 (ENSPCOG00000024026) IRAK1 (ENSPCOG00000027349) #12 MECP2 (ENSPCOG00000024848) #13 ENSPCOG00000015866 #14 TKTL1 (ENSPCOG00000023105) FLNA (ENSPCOG00000011059) EMD (ENSPCOG00000015697) #16 ENSPCOG00000027122 #17 DNASE1L1 (ENSPCOG00000022635) #18 TAFAZZIN (ENSPCOG00000023186) #19 ATP6AP1 (ENSPCOG00000015508) #20 GDI1 (ENSPCOG00000015358) #21 ENSPCOG00000024061 #22 PLXNA3 (ENSPCOG00000015843) #23 LAGE3 (ENSPCOG00000027993) #24 UBL4A (ENSPCOG00000022735) #25 SLC10A3 (ENSPCOG00000025772) #26 FAM3A (ENSPCOG00000016869) #27 G6PD (ENSPCOG00000028512) #28 IKBKG (ENSPCOG00000026138) #29 Greater bamboo lemur MODERN SPECIES 1160 FAM50A (ENSPSMG00000000520) #22 ENSPSMG00000000524 #23 ENSPSMG00000000535 #23 LAGE3 (ENSPSMG00000000544) #24 UBL4A (ENSPSMG00000000561) #25 FAM3A (ENSPSMG00000000661) #27 G6PD (ENSPSMG00000000786) #28 IKBKG (ENSPSMG00000000861) #29 Bushbaby MODERN SPECIES 364 TMEM187 (ENSOGAG00000026922) IRAK1 (ENSOGAG00000015108) #12 MECP2 (ENSOGAG00000015115) #13 ENSOGAG00000000897 #14 TEX28 (ENSOGAG00000000900) #15 TKTL1 (ENSOGAG00000000901) ENSOGAG00000027452 ENSOGAG00000017264 FLNA (ENSOGAG00000015265) EMD (ENSOGAG00000029264) #16 ENSOGAG00000000099 #17 DNASE1L1 (ENSOGAG00000000100) #18 TAFAZZIN (ENSOGAG00000008304) #19 ATP6AP1 (ENSOGAG00000008310) #20 GDI1 (ENSOGAG00000008317) #21 FAM50A (ENSOGAG00000008322) #22 PLXNA3 (ENSOGAG00000008330) #23 UBL4A (ENSOGAG00000030091) #25 SLC10A3 (ENSOGAG00000002637) #26 FAM3A (ENSOGAG00000016669) #27 G6PD (ENSOGAG00000033296) #28 IKBKG (ENSOGAG00000024983) #29 ENSOGAG00000031211 ENSOGAG00000027129 ENSOGAG00000032447 Haplorrhini ANCESTRAL SPECIES 33 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00910000146917 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00410000025802.h ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00940000163020 Tarsier MODERN SPECIES 6918 ATP6AP1 (ENSTSYG00000030854) #20 GDI1 (ENSTSYG00000007275) #21 FAM50A (ENSTSYG00000032985) #22 Simiiformes ANCESTRAL SPECIES 9 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00910000146917 ENSGT00910000147052 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00410000025802.h.a ##24 ENSGT00410000025802.h.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 Platyrrhini ANCESTRAL SPECIES 42 ENSGT00940000161383 #11 ENSGT00940000160502 #12 ENSGT00910000146917 ENSGT00910000147052 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426.a ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b.n #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00410000025802.h.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647.g Mas night monkey MODERN SPECIES 1311 ENSANAG00000036053 ##17 DNASE1L1 (ENSANAG00000019417) #18 TAFAZZIN (ENSANAG00000022392) #19 ATP6AP1 (ENSANAG00000036139) #20 GDI1 (ENSANAG00000028381) #21 FAM50A (ENSANAG00000031398) #22 PLXNA3 (ENSANAG00000027264) #23 LAGE3 (ENSANAG00000032507) #24 ENSANAG00000029762 #25 SLC10A3 (ENSANAG00000031182) #26 FAM3A (ENSANAG00000028348) #27 G6PD (ENSANAG00000031927) #28 IKBKG (ENSANAG00000032209) #29 GAB3 (ENSANAG00000032427) DKC1 (ENSANAG00000022732) MPP1 (ENSANAG00000034369) F8 (ENSANAG00000025258) ENSANAG00000030681 ENSANAG00000029218 MTCP1 (ENSANAG00000028247) BRCC3 (ENSANAG00000024915) Cebidae ANCESTRAL SPECIES 27 ENSGT00940000161383 #11 ENSGT00940000160502 #12 ENSGT00910000146917 ENSGT00910000147052 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426.a ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b.n #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00410000025802.h.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.e.a.a.a ENSGT00390000012647.g Cebidae_a ANCESTRAL SPECIES 78 ENSGT00940000161383 #11 ENSGT00940000160502 #12 ENSGT00910000146917 ENSGT00910000147052 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426.a ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b.n #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00410000025802.h.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.e.a.a.a ENSGT00390000012647.g Capuchin MODERN SPECIES 862 ENSCCAG00000024992 ##17 DNASE1L1 (ENSCCAG00000038109) #18 TAZ (ENSCCAG00000033091) #19 ATP6AP1 (ENSCCAG00000026799) #20 GDI1 (ENSCCAG00000023267) #21 FAM50A (ENSCCAG00000022089) #22 PLXNA3 (ENSCCAG00000029210) #23 LAGE3 (ENSCCAG00000021965) #24 UBL4A (ENSCCAG00000033285) #25 SLC10A3 (ENSCCAG00000020474) #26 FAM3A (ENSCCAG00000030432) #27 ENSCCAG00000025941 G6PD (ENSCCAG00000033900) #28 IKBKG (ENSCCAG00000030204) #29 ENSCCAG00000030506 ##24 Bolivian squirrel monkey MODERN SPECIES 236 IRAK1 (ENSSBOG00000018599) #12 ENSSBOG00000017747 MECP2 (ENSSBOG00000024999) #13 ENSSBOG00000025722 ENSSBOG00000022236 #14 TEX28 (ENSSBOG00000035728) #15 TKTL1 (ENSSBOG00000020176) FLNA (ENSSBOG00000035541) EMD (ENSSBOG00000027560) #16 ENSSBOG00000025724 #17 DNASE1L1 (ENSSBOG00000028977) #18 ENSSBOG00000033124 TAFAZZIN (ENSSBOG00000029961) #19 ATP6AP1 (ENSSBOG00000027327) #20 GDI1 (ENSSBOG00000021247) #21 FAM50A (ENSSBOG00000029861) #22 PLXNA3 (ENSSBOG00000034877) #23 LAGE3 (ENSSBOG00000024470) #24 UBL4A (ENSSBOG00000030369) #25 SLC10A3 (ENSSBOG00000027728) #26 FAM3A (ENSSBOG00000030279) #27 G6PD (ENSSBOG00000003239) #28 IKBKG (ENSSBOG00000033453) #29 ENSSBOG00000031845 ##24 GAB3 (ENSSBOG00000027441) DKC1 (ENSSBOG00000033746) MPP1 (ENSSBOG00000026026) SMIM9 (ENSSBOG00000018626) F8 (ENSSBOG00000002240) ENSSBOG00000034180 CMC4 (ENSSBOG00000033964) Marmoset MODERN SPECIES 78 AVPR2 (ENSCJAG00000011022) #8 NAA10 (ENSCJAG00000014506) #10 RENBP (ENSCJAG00000014500) IRAK1 (ENSCJAG00000014452) #12 MECP2 (ENSCJAG00000016796) #13 ENSCJAG00000014412 #14 TEX28 (ENSCJAG00000042631) #15 TKTL1 (ENSCJAG00000014368) FLNA (ENSCJAG00000034881) EMD (ENSCJAG00000011853) #16 ENSCJAG00000011822 #17 DNASE1L1 (ENSCJAG00000011800) #18 ENSCJAG00000016995 #19 ATP6AP1 (ENSCJAG00000040642) #20 GDI1 (ENSCJAG00000016910) #21 FAM50A (ENSCJAG00000063509) #22 PLXNA3 (ENSCJAG00000016816) #23 LAGE3 (ENSCJAG00000041329) #24 UBL4A (ENSCJAG00000074416) #25 SLC10A3 (ENSCJAG00000077479) #26 FAM3A (ENSCJAG00000016787) #27 G6PD (ENSCJAG00000016775) #28 IKBKG (ENSCJAG00000016764) #29 GAB3 (ENSCJAG00000016753) ENSCJAG00000082602 DKC1 (ENSCJAG00000004210) MPP1 (ENSCJAG00000004227) SMIM9 (ENSCJAG00000004256) F8 (ENSCJAG00000004258) ENSCJAG00000076498 ENSCJAG00000079192 Catarrhini ANCESTRAL SPECIES 12 ENSGT00940000160502 #12 ENSGT00910000146917 ENSGT00910000147052 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.a.b.e.a ##17 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a.m #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00390000002566 ENSGT00410000025802.h.a.a ##24 ENSGT00410000025802.h.a.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Hominoidea ANCESTRAL SPECIES 29 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00910000146917 ENSGT00910000147052 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.a.b.e.a ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a.m #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00390000002566 ENSGT00410000025802.h.a.a ##24 ENSGT00410000025802.h.a.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Hominidae ANCESTRAL SPECIES 8 ENSGT00940000160502 #12 ENSGT00910000146917 ENSGT00910000147052 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b.f #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00390000003897.s.b.a.a.b.f ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a.m #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00390000002566 ENSGT00410000025802.h.a.a ##24 ENSGT00410000025802.h.b.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Orangutan MODERN SPECIES 242 RENBP (ENSPPYG00000020862) HCFC1 (ENSPPYG00000020863) #11 TMEM187 (ENSPPYG00000020864) IRAK1 (ENSPPYG00000020865) #12 MECP2 (ENSPPYG00000020866) #13 ENSPPYG00000020867 #14 TEX28 (ENSPPYG00000020869) #15 TKTL1 (ENSPPYG00000020870) FLNA (ENSPPYG00000020871) EMD (ENSPPYG00000020873) #16 RPL10 (ENSPPYG00000020874) #17 DNASE1L1 (ENSPPYG00000020875) #18 TAFAZZIN (ENSPPYG00000020876) #19 ATP6AP1 (ENSPPYG00000020877) #20 GDI1 (ENSPPYG00000020878) #21 FAM50A (ENSPPYG00000020879) #22 LAGE3 (ENSPPYG00000033247) #24 UBL4A (ENSPPYG00000020882) #25 SLC10A3 (ENSPPYG00000020883) #26 FAM3A (ENSPPYG00000020884) #27 G6PD (ENSPPYG00000020885) #28 IKBKG (ENSPPYG00000020886) #29 ENSPPYG00000020887 ENSPPYG00000020888 ##24 CTAG2 (ENSPPYG00000020890) ##24 GAB3 (ENSPPYG00000020891) DKC1 (ENSPPYG00000020892) MPP1 (ENSPPYG00000020893) SMIM9 (ENSPPYG00000020894) F8 (ENSPPYG00000020895) ENSPPYG00000035928 Homo/Pan/Gorilla group ANCESTRAL SPECIES 9 ENSGT00910000146917 ENSGT00910000147052 ENSGT00530000063687.b.b.b.e #13 ENSGT01030000234549.a.a.a.b.f #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.a.b.e.a ##17 ENSGT00530000063687.b.b.b.f #13 ENSGT00390000003897.s.b.a.a.b.f ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a.m #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a.i #28 ENSGT00530000063808.a #29 ENSGT00410000025802.h.a.a ##24 ENSGT00410000025802.h.b.a ##24 ENSGT00530000063801.a.n ENSGT00410000025802.h.b.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 Gorilla MODERN SPECIES 523 TMEM187 (ENSGGOG00000008146) IRAK1 (ENSGGOG00000000220) #12 ENSGGOG00000040298 ENSGGOG00000041822 MECP2 (ENSGGOG00000042467) #13 ENSGGOG00000004184 #14 TEX28 (ENSGGOG00000004188) #15 TKTL1 (ENSGGOG00000004191) FLNA (ENSGGOG00000004199) EMD (ENSGGOG00000009388) #16 ENSGGOG00000000131 ##17 DNASE1L1 (ENSGGOG00000000132) #18 TAZ (ENSGGOG00000011947) #19 ATP6AP1 (ENSGGOG00000013466) #20 GDI1 (ENSGGOG00000013474) #21 ENSGGOG00000013484 #22 PLXNA3 (ENSGGOG00000013493) #23 LAGE3 (ENSGGOG00000013507) #24 ENSGGOG00000013509 #25 SLC10A3 (ENSGGOG00000013520) #26 ENSGGOG00000005270 #27 G6PD (ENSGGOG00000004890) #28 IKBKG (ENSGGOG00000004896) #29 ENSGGOG00000025927 ENSGGOG00000040976 ENSGGOG00000022830 ##24 ENSGGOG00000043272 ##24 ENSGGOG00000025843 #29 GAB3 (ENSGGOG00000001042) DKC1 (ENSGGOG00000001045) MPP1 (ENSGGOG00000001049) Homo/Pan group ANCESTRAL SPECIES 9 ENSGT00910000146917 ENSGT00910000147052 ENSGT00530000063687.b.b.b.e #13 ENSGT01030000234549.a.a.a.b.f #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.b ##17 ENSGT00530000063687.b.b.b.f #13 ENSGT00390000003897.s.b.a.a.b.f ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a.m #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a.i #28 ENSGT00530000063808.a #29 ENSGT00410000025802.h.a.a ##24 ENSGT00410000025802.h.b.a ##24 ENSGT00530000063801.a.n ENSGT00410000025802.h.b.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 Pan ANCESTRAL SPECIES 43 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a.m #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a.i #28 ENSGT00530000063808.a #29 ENSGT00390000002566 ENSGT00410000025802.h.b.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000011549.e ENSGT00390000005685 ENSGT00940000160294 Chimpanzee MODERN SPECIES 972 RENBP (ENSPTRG00000022420) HCFC1 (ENSPTRG00000022421) #11 ENSPTRG00000022422 IRAK1 (ENSPTRG00000022423) #12 ENSPTRG00000046201 ENSPTRG00000047302 MECP2 (ENSPTRG00000048003) #13 OPN1LW (ENSPTRG00000022427) #14 TEX28 (ENSPTRG00000022426) #15 TKTL1 (ENSPTRG00000022429) RPL10 (ENSPTRG00000043378) ##17 DNASE1L1 (ENSPTRG00000042704) #18 TAFAZZIN (ENSPTRG00000022434) #19 ATP6AP1 (ENSPTRG00000022435) #20 GDI1 (ENSPTRG00000028169) #21 FAM50A (ENSPTRG00000022437) #22 PLXNA3 (ENSPTRG00000022438) #23 LAGE3 (ENSPTRG00000022439) #24 UBL4A (ENSPTRG00000022440) #25 SLC10A3 (ENSPTRG00000051548) #26 FAM3A (ENSPTRG00000022442) #27 G6PD (ENSPTRG00000022443) #28 IKBKG (ENSPTRG00000040677) #29 ENSPTRG00000050406 ENSPTRG00000044790 ENSPTRG00000022445 ##24 ENSPTRG00000040429 ##24 ENSPTRG00000043176 ENSPTRG00000052333 ENSPTRG00000045486 #29 ENSPTRG00000022446 ##24 Bonobo MODERN SPECIES 369 L1CAM (ENSPPAG00000042079) #7 AVPR2 (ENSPPAG00000034862) #8 ARHGAP4 (ENSPPAG00000039545) #9 ENSPPAG00000037021 #10 RENBP (ENSPPAG00000035978) HCFC1 (ENSPPAG00000044057) #11 TMEM187 (ENSPPAG00000007444) IRAK1 (ENSPPAG00000040186) #12 ENSPPAG00000042175 MECP2 (ENSPPAG00000034020) #13 ENSPPAG00000034160 ##17 DNASE1L1 (ENSPPAG00000012889) #18 TAFAZZIN (ENSPPAG00000036682) #19 ATP6AP1 (ENSPPAG00000036293) #20 GDI1 (ENSPPAG00000027756) #21 ENSPPAG00000043116 #22 PLXNA3 (ENSPPAG00000037363) #23 LAGE3 (ENSPPAG00000028018) #24 ENSPPAG00000035975 #25 SLC10A3 (ENSPPAG00000036137) #26 ENSPPAG00000028567 #27 G6PD (ENSPPAG00000030117) #28 IKBKG (ENSPPAG00000019041) #29 ENSPPAG00000024171 ENSPPAG00000030022 ##24 GAB3 (ENSPPAG00000033506) DKC1 (ENSPPAG00000023820) MPP1 (ENSPPAG00000040588) ENSPPAG00000031767 SMIM9 (ENSPPAG00000035097) F8 (ENSPPAG00000033513) Human MODERN SPECIES 1827 IRAK1 (ENSG00000184216) #12 MECP2 (ENSG00000169057) #13 OPN1LW (ENSG00000102076) #14 OPN1MW (ENSG00000268221) #14 OPN1MW2 (ENSG00000166160) #14 OPN1MW3 (ENSG00000269433) #14 TEX28 (ENSG00000278057) #15 TKTL1 (ENSG00000007350) FLNA (ENSG00000196924) EMD (ENSG00000102119) #16 RPL10 (ENSG00000147403) ##17 DNASE1L1 (ENSG00000013563) #18 TAFAZZIN (ENSG00000102125) #19 ATP6AP1 (ENSG00000071553) #20 GDI1 (ENSG00000203879) #21 FAM50A (ENSG00000071859) #22 PLXNA3 (ENSG00000130827) #23 LAGE3 (ENSG00000196976) #24 UBL4A (ENSG00000102178) #25 SLC10A3 (ENSG00000126903) #26 FAM3A (ENSG00000071889) #27 G6PD (ENSG00000160211) #28 IKBKG (ENSG00000269335) #29 CTAG1A (ENSG00000268651) ##24 CTAG1B (ENSG00000184033) ##24 CTAG2 (ENSG00000126890) ##24 GAB3 (ENSG00000160219) DKC1 (ENSG00000130826) MPP1 (ENSG00000130830) SMIM9 (ENSG00000203870) F8 (ENSG00000185010) Gibbon MODERN SPECIES 449 ENSNLEG00000013753 HCFC1 (ENSNLEG00000026624) #11 TMEM187 (ENSNLEG00000013763) ENSNLEG00000013767 #12 ENSNLEG00000013783 #13 ENSNLEG00000013787 #14 TEX28 (ENSNLEG00000013808) #15 TKTL1 (ENSNLEG00000013813) FLNA (ENSNLEG00000013842) EMD (ENSNLEG00000014117) #16 ENSNLEG00000028143 ##17 DNASE1L1 (ENSNLEG00000014149) #18 ENSNLEG00000014176 #19 ATP6AP1 (ENSNLEG00000014184) #20 GDI1 (ENSNLEG00000014222) #21 FAM50A (ENSNLEG00000014266) #22 PLXNA3 (ENSNLEG00000014273) #23 LAGE3 (ENSNLEG00000028687) #24 ENSNLEG00000014292 #25 SLC10A3 (ENSNLEG00000014293) #26 FAM3A (ENSNLEG00000030950) #27 ENSNLEG00000014300 #28 ENSNLEG00000014311 #29 GAB3 (ENSNLEG00000014318) DKC1 (ENSNLEG00000014323) MPP1 (ENSNLEG00000014358) ENSNLEG00000014423 ENSNLEG00000028336 SMIM9 (ENSNLEG00000014424) F8 (ENSNLEG00000014427) ENSNLEG00000018302 Cercopithecidae ANCESTRAL SPECIES 37 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a.m #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00910000147580 ENSGT00530000063808.a #29 ENSGT00390000002566 ENSGT00410000025802.h.a.a ##24 ENSGT00410000025802.h.a.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 Rhinopithecus ANCESTRAL SPECIES 316 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a.m #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00910000147580 ENSGT00530000063808.a #29 ENSGT00390000002566 ENSGT00410000025802.h.a.a ##24 ENSGT00410000025802.h.a.b ##24 Black snub-nosed monkey MODERN SPECIES 1888 ENSRBIG00000037040 #16 ENSRBIG00000039019 ENSRBIG00000042996 #17 DNASE1L1 (ENSRBIG00000030074) #18 TAFAZZIN (ENSRBIG00000035066) #19 ATP6AP1 (ENSRBIG00000036700) #20 GDI1 (ENSRBIG00000042799) #21 FAM50A (ENSRBIG00000037965) #22 PLXNA3 (ENSRBIG00000035203) #23 ENSRBIG00000034128 UBL4A (ENSRBIG00000023877) #25 SLC10A3 (ENSRBIG00000034698) #26 FAM3A (ENSRBIG00000025198) #27 ENSRBIG00000028634 G6PD (ENSRBIG00000030157) #28 ENSRBIG00000029055 IKBKG (ENSRBIG00000031684) #29 ENSRBIG00000027585 ENSRBIG00000030147 ##24 Golden snub-nosed monkey MODERN SPECIES 1454 ENSRROG00000019247 #17 DNASE1L1 (ENSRROG00000037526) #18 TAFAZZIN (ENSRROG00000037988) #19 ATP6AP1 (ENSRROG00000026809) #20 FAM50A (ENSRROG00000038239) #22 PLXNA3 (ENSRROG00000044893) #23 LAGE3 (ENSRROG00000012840) #24 UBL4A (ENSRROG00000006560) #25 SLC10A3 (ENSRROG00000044112) #26 FAM3A (ENSRROG00000043376) #27 ENSRROG00000033119 G6PD (ENSRROG00000033216) #28 IKBKG (ENSRROG00000008677) #29 ENSRROG00000035084 ENSRROG00000013818 ENSRROG00000034699 ##24 CTAG2 (ENSRROG00000025938) ##24 Cercopithecinae ANCESTRAL SPECIES 25 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a.m #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00910000147580 ENSGT00530000063808.a #29 ENSGT00390000002566 ENSGT00410000025802.h.a.a ##24 ENSGT00410000025802.h.a.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 Vervet Monkey MODERN SPECIES 197 DNASE1L1 (ENSCSAG00000017731) #18 TAFAZZIN (ENSCSAG00000017730) #19 ATP6AP1 (ENSCSAG00000017725) #20 GDI1 (ENSCSAG00000017723) #21 FAM50A (ENSCSAG00000017718) #22 Cercopithecinae_a ANCESTRAL SPECIES 11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00910000146917 ENSGT00910000147052 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00390000002034 #16 ENSGT00940000153588.b ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a.m #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00910000147580 ENSGT00530000063808.a #29 ENSGT00390000002566 ENSGT00410000025802.h.a.a ##24 ENSGT00410000025802.h.a.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 Cercopithecinae_b ANCESTRAL SPECIES 51 ENSGT00390000003897.s.b.a.a.b.e.a ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a.m #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00910000147580 ENSGT00530000063808.a #29 ENSGT00390000002566 ENSGT00390000002034 #16 ENSGT00940000153588.b ENSGT00940000162426 ENSGT00940000162843 #15 ENSGT01030000234549.a.a.a.b #14 ENSGT00530000063687.b.b.b #13 Cercopithecinae_d ANCESTRAL SPECIES 195 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a.m #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00910000147580 ENSGT00530000063808.a #29 ENSGT00390000002566 Drill MODERN SPECIES 361 ENSMLEG00000025660 #17 DNASE1L1 (ENSMLEG00000042325) #18 TAFAZZIN (ENSMLEG00000041537) #19 ATP6AP1 (ENSMLEG00000026333) #20 GDI1 (ENSMLEG00000014459) #21 FAM50A (ENSMLEG00000034206) #22 PLXNA3 (ENSMLEG00000039715) #23 LAGE3 (ENSMLEG00000031787) #24 UBL4A (ENSMLEG00000029271) #25 SLC10A3 (ENSMLEG00000031363) #26 FAM3A (ENSMLEG00000031424) #27 G6PD (ENSMLEG00000040869) #28 IKBKG (ENSMLEG00000032380) #29 ENSMLEG00000037003 ENSMLEG00000009651 Sooty mangabey MODERN SPECIES 567 ENSCATG00000030970 #17 DNASE1L1 (ENSCATG00000014042) #18 TAFAZZIN (ENSCATG00000034866) #19 ATP6AP1 (ENSCATG00000039938) #20 GDI1 (ENSCATG00000031684) #21 FAM50A (ENSCATG00000032169) #22 PLXNA3 (ENSCATG00000031009) #23 LAGE3 (ENSCATG00000025654) #24 UBL4A (ENSCATG00000036850) #25 SLC10A3 (ENSCATG00000032881) #26 FAM3A (ENSCATG00000022515) #27 G6PD (ENSCATG00000009953) #28 ENSCATG00000021841 Macaca ANCESTRAL SPECIES 13 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00910000146917 ENSGT00910000147052 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00390000002034 #16 ENSGT00940000153588.b ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a.m #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00390000002566 ENSGT00410000025802.h.a.a ##24 ENSGT00410000025802.h.a.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Pig-tailed macaque MODERN SPECIES 403 TEX28 (ENSMNEG00000032132) #15 TKTL1 (ENSMNEG00000045070) EMD (ENSMNEG00000042917) #16 FLNA (ENSMNEG00000040468) ENSMNEG00000038094 #17 DNASE1L1 (ENSMNEG00000032874) #18 TAFAZZIN (ENSMNEG00000038446) #19 ATP6AP1 (ENSMNEG00000040534) #20 GDI1 (ENSMNEG00000029142) #21 FAM50A (ENSMNEG00000033378) #22 PLXNA3 (ENSMNEG00000029520) #23 LAGE3 (ENSMNEG00000044542) #24 UBL4A (ENSMNEG00000039513) #25 SLC10A3 (ENSMNEG00000042913) #26 FAM3A (ENSMNEG00000034258) #27 G6PD (ENSMNEG00000031229) #28 Macaca_a ANCESTRAL SPECIES 11 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00390000002034 #16 ENSGT00940000153588.b ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a.m #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.b.a.b.b.b ENSGT00530000063808.a #29 ENSGT00410000025802.h.a.a ##24 ENSGT00410000025802.h.a.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Rhesus MODERN SPECIES 327 TMEM187 (ENSMMUG00000005132) IRAK1 (ENSMMUG00000018703) #12 MECP2 (ENSMMUG00000018704) #13 ENSMMUG00000006166 #14 ENSMMUG00000055487 #15 ENSMMUG00000054361 #14 ENSMMUG00000050314 #15 TKTL1 (ENSMMUG00000013667) EMD (ENSMMUG00000013678) #16 FLNA (ENSMMUG00000013668) RPL10 (ENSMMUG00000005494) #17 DNASE1L1 (ENSMMUG00000050873) #18 TAFAZZIN (ENSMMUG00000005498) #19 ATP6AP1 (ENSMMUG00000005501) #20 GDI1 (ENSMMUG00000005502) #21 FAM50A (ENSMMUG00000005505) #22 PLXNA3 (ENSMMUG00000005507) #23 LAGE3 (ENSMMUG00000040340) #24 UBL4A (ENSMMUG00000009015) #26 ENSMMUG00000063935 FAM3A (ENSMMUG00000009012) #27 G6PD (ENSMMUG00000017409) #28 ENSMMUG00000052573 ##24 ENSMMUG00000017405 ##24 ENSMMUG00000051483 IKBKG (ENSMMUG00000017277) #29 ENSMMUG00000051337 ENSMMUG00000045112 ##24 GAB3 (ENSMMUG00000015190) DKC1 (ENSMMUG00000005768) MPP1 (ENSMMUG00000005772) Crab-eating macaque MODERN SPECIES 175 HCFC1 (ENSMFAG00000035763) #11 IRAK1 (ENSMFAG00000042818) #12 MECP2 (ENSMFAG00000033178) #13 ENSMFAG00000049901 ENSMFAG00000043960 #14 ENSMFAG00000039596 #15 ENSMFAG00000059786 #15 TKTL1 (ENSMFAG00000031072) EMD (ENSMFAG00000045316) #16 FLNA (ENSMFAG00000035790) ENSMFAG00000040824 ##17 DNASE1L1 (ENSMFAG00000038787) #18 TAFAZZIN (ENSMFAG00000028691) #19 ATP6AP1 (ENSMFAG00000003619) #20 GDI1 (ENSMFAG00000037198) #21 FAM50A (ENSMFAG00000021581) #22 PLXNA3 (ENSMFAG00000040837) #23 LAGE3 (ENSMFAG00000004038) #24 UBL4A (ENSMFAG00000000884) #25 SLC10A3 (ENSMFAG00000035989) #26 FAM3A (ENSMFAG00000041814) #27 G6PD (ENSMFAG00000043207) #28 IKBKG (ENSMFAG00000032230) #29 ENSMFAG00000060522 F8 (ENSMFAG00000039948) FUNDC2 (ENSMFAG00000038031) ENSMFAG00000045993 MTCP1 (ENSMFAG00000052287) BRCC3 (ENSMFAG00000031106) ENSMFAG00000056611 VBP1 (ENSMFAG00000032032) Laurasiatheria ANCESTRAL SPECIES 26 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00910000146917 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00410000025802.h ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 Eulipotyphla ANCESTRAL SPECIES ENSGT00390000004735.A #22 Common shrew MODERN SPECIES 12294 FAM50A (ENSSARG00000006465) #22 Laurasiatheria_a ANCESTRAL SPECIES 10 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00910000146917 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00410000025802.h ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 Artiodactyla ANCESTRAL SPECIES 9 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00910000146917 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT01050000244815.B.a.a ENSGT00410000025802.g.b ##24 ENSGT01030000235238 ENSGT00410000025802.h ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 Suina ANCESTRAL SPECIES 7 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00910000146917 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00390000002034 #16 ENSGT00940000153588.b ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a.f #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT01050000244815.B.a.a ENSGT00410000025802.g.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a Chacoan peccary MODERN SPECIES 44 ENSCWAG00000021182 ##17 DNASE1L1 (ENSCWAG00000021201) #18 TAFAZZIN (ENSCWAG00000021221) #19 ATP6AP1 (ENSCWAG00000021247) #20 GDI1 (ENSCWAG00000021263) #21 FAM50A (ENSCWAG00000021283) #22 PLXNA3 (ENSCWAG00000021299) #23 ENSCWAG00000021347 #24 ENSCWAG00000021354 UBL4A (ENSCWAG00000000008) #25 SLC10A3 (ENSCWAG00000000012) #26 FAM3A (ENSCWAG00000000031) #27 G6PD (ENSCWAG00000000077) #28 IKBKG (ENSCWAG00000000145) #29 ENSCWAG00000000203 ENSCWAG00000000223 ENSCWAG00000000236 ##24 GAB3 (ENSCWAG00000000272) DKC1 (ENSCWAG00000000314) MPP1 (ENSCWAG00000000412) SMIM9 (ENSCWAG00000000458) Pig MODERN SPECIES 300 HCFC1 (ENSSSCG00000012793) #11 ENSSSCG00000050581 IRAK1 (ENSSSCG00000012795) #12 ENSSSCG00000059337 MECP2 (ENSSSCG00000034742) #13 ENSSSCG00000029523 #14 TEX28 (ENSSSCG00000029513) #15 TKTL1 (ENSSSCG00000029443) EMD (ENSSSCG00000037777) #16 FLNA (ENSSSCG00000033299) RPL10 (ENSSSCG00000035997) ##17 DNASE1L1 (ENSSSCG00000037032) #18 TAFAZZIN (ENSSSCG00000039655) #19 ATP6AP1 (ENSSSCG00000037310) #20 GDI1 (ENSSSCG00000030421) #21 FAM50A (ENSSSCG00000025303) #22 PLXNA3 (ENSSSCG00000023483) #23 ENSSSCG00000032959 #24 ENSSSCG00000057536 #25 SLC10A3 (ENSSSCG00000025766) #26 FAM3A (ENSSSCG00000028934) #27 G6PD (ENSSSCG00000025108) #28 IKBKG (ENSSSCG00000012825) #29 ENSSSCG00000012827 ENSSSCG00000049540 ##24 GAB3 (ENSSSCG00000012824) DKC1 (ENSSSCG00000012823) F8 (ENSSSCG00000012822) SMIM9 (ENSSSCG00000055917) ENSSSCG00000057758 ENSSSCG00000054901 Artiodactyla_a ANCESTRAL SPECIES 9 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00910000146917 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00960000186859 ENSGT00410000025802.g.b ##24 ENSGT01030000235238 ENSGT00410000025802.h ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 Camelidae ANCESTRAL SPECIES 80 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00910000146917 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 Arabian camel MODERN SPECIES 204 HCFC1 (ENSCDRG00005010537) #11 TMEM187 (ENSCDRG00005011270) IRAK1 (ENSCDRG00005011306) #12 ENSCDRG00005011350 MECP2 (ENSCDRG00005011374) #13 ENSCDRG00005011483 #14 TEX28 (ENSCDRG00005011542) #15 TKTL1 (ENSCDRG00005011584) FLNA (ENSCDRG00005011684) ENSCDRG00005011914 #16 ENSCDRG00005012077 ##17 DNASE1L1 (ENSCDRG00005012179) #18 TAZ (ENSCDRG00005012375) #19 ATP6AP1 (ENSCDRG00005012618) #20 GDI1 (ENSCDRG00005012702) #21 FAM50A (ENSCDRG00005012822) #22 LAGE3 (ENSCDRG00005015984) #24 SLC10A3 (ENSCDRG00005016014) #26 FAM3A (ENSCDRG00005016065) #27 G6PD (ENSCDRG00005016281) #28 IKBKG (ENSCDRG00005016363) #29 ENSCDRG00005016489 ENSCDRG00005016521 ##24 ENSCDRG00005016563 ##24 ENSCDRG00005016586 ##24 GAB3 (ENSCDRG00005016636) ENSCDRG00005017097 ##24 DKC1 (ENSCDRG00005017117) MPP1 (ENSCDRG00005017184) SMIM9 (ENSCDRG00005017392) F8 (ENSCDRG00005017422) Artiodactyla_b ANCESTRAL SPECIES 19 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00960000186859 ENSGT00410000025802.g.b ##24 ENSGT01030000235238 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Pecora ANCESTRAL SPECIES 38 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.a.b.b ##17 ENSGT00390000003897.s.b.a.a.b.a.a ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 1 PRKCB (ENSCHYG00000001783) ENSCHYG00000001863 CACNG3 (ENSCHYG00000001876) RBBP6 (ENSCHYG00000001969) TNRC6A (ENSCHYG00000002244) SLC5A11 (ENSCHYG00000002666) ARHGAP17 (ENSCHYG00000002855) ENSCHYG00000003044 ENSCHYG00000003072 AQP8 (ENSCHYG00000003112) ZKSCAN2 (ENSCHYG00000003171) ENSCHYG00000003180 ENSCHYG00000003186 KDM8 (ENSCHYG00000003199) NSMCE1 (ENSCHYG00000003212) ENSCHYG00000003233 #22 IL4R (ENSCHYG00000003248) IL21R (ENSCHYG00000003266) GTF3C1 (ENSCHYG00000003332) KATNIP (ENSCHYG00000003636) GSG1L (ENSCHYG00000003754) XPO6 (ENSCHYG00000003767) SBK1 (ENSCHYG00000003796) ENSCHYG00000003821 SPNS1 (ENSCHYG00000003884) NFATC2IP (ENSCHYG00000003964) CD19 (ENSCHYG00000003996) RABEP2 (ENSCHYG00000004049) ATP2A1 (ENSCHYG00000004187) SH2B1 (ENSCHYG00000004267) TUFM (ENSCHYG00000004316) Yarkand deer MODERN SPECIES 6 ENSCHYG00000004880 SFRP5 (ENSCHYG00000004868) ZFYVE27 (ENSCHYG00000004712) MARVELD1 (ENSCHYG00000004459) AVPI1 (ENSCHYG00000004424) PI4K2A (ENSCHYG00000021371) MORN4 (ENSCHYG00000021303) HOGA1 (ENSCHYG00000021197) ANKRD2 (ENSCHYG00000020741) UBTD1 (ENSCHYG00000020651) MMS19 (ENSCHYG00000020307) ZDHHC16 (ENSCHYG00000019968) ENSCHYG00000019703 PGAM1 (ENSCHYG00000019647) RRP12 (ENSCHYG00000018769) ENSCHYG00000018643 #22 ENSCHYG00000018613 FRAT2 (ENSCHYG00000018576) FRAT1 (ENSCHYG00000018557) ARHGAP19 (ENSCHYG00000018209) ENSCHYG00000018017 SLIT1 (ENSCHYG00000017383) LCOR (ENSCHYG00000017121) PIK3AP1 (ENSCHYG00000016886) TM9SF3 (ENSCHYG00000016672) TLL2 (ENSCHYG00000016501) OPALIN (ENSCHYG00000016188) DNTT (ENSCHYG00000015940) BLNK (ENSCHYG00000015608) ZNF518A (ENSCHYG00000015551) CCNJ (ENSCHYG00000015424) Percora_a ANCESTRAL SPECIES 35 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.a.b.b ##17 ENSGT00390000003897.s.b.a.a.b.a.a ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 Bovidae ANCESTRAL SPECIES 33 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.a.b.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT01030000235238.f ENSGT00410000025802.g.b ##24 ENSGT00960000186859 Caprinae ANCESTRAL SPECIES 45 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.a.b.a.a ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 Rambouillet Sheep MODERN SPECIES 205 NAA10 (ENSOARG00020023246) #10 RENBP (ENSOARG00020023053) HCFC1 (ENSOARG00020022415) #11 TMEM187 (ENSOARG00020022375) IRAK1 (ENSOARG00020022349) #12 MECP2 (ENSOARG00020022209) #13 OPN1LW (ENSOARG00020022140) #14 TKTL1 (ENSOARG00020021994) FLNA (ENSOARG00020021631) EMD (ENSOARG00020021549) #16 RPL10 (ENSOARG00020021458) ##17 DNASE1L1 (ENSOARG00020021378) #18 TAFAZZIN (ENSOARG00020020574) #19 ATP6AP1 (ENSOARG00020020475) #20 GDI1 (ENSOARG00020020178) #21 FAM50A (ENSOARG00020020129) #22 PLXNA3 (ENSOARG00020019933) #23 UBL4A (ENSOARG00020019884) #25 SLC10A3 (ENSOARG00020019833) #26 G6PD (ENSOARG00020019292) #28 IKBKG (ENSOARG00020018901) #29 ENSOARG00020018798 #24 ENSOARG00020018745 ##24 ENSOARG00020018703 ENSOARG00020018678 ENSOARG00020018615 ENSOARG00020018581 ##24 ENSOARG00020018525 ENSOARG00020018504 ENSOARG00020018489 ENSOARG00020018476 Goat MODERN SPECIES 247 ENSCHIG00000025239 ##17 DNASE1L1 (ENSCHIG00000021139) #18 TAFAZZIN (ENSCHIG00000014783) #19 ATP6AP1 (ENSCHIG00000006977) #20 GDI1 (ENSCHIG00000011309) #21 FAM50A (ENSCHIG00000002986) #22 PLXNA3 (ENSCHIG00000022124) #23 Bovinae ANCESTRAL SPECIES 46 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.a.b.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00410000025802.g.b ##24 ENSGT00960000186859 Bos ANCESTRAL SPECIES 36 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.a.b.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT01100000263481.n.a.b.b.a.a.b.b ENSGT00530000063808.a #29 ENSGT00410000025802.g.b ##24 ENSGT00960000186859 ENSGT00940000162668 ENSGT00940000163888 ENSGT00940000158335 ENSGT00730000111097.e ENSGT00940000159951.d.b.b.a.c.b Bos_a ANCESTRAL SPECIES 39 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.a ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00530000063435.a #28 ENSGT01100000263481.n.a.b.b.a.a.b.b ENSGT00530000063808.a #29 ENSGT00410000025802.g.b ##24 ENSGT00940000154891 ENSGT00910000144363.g.a.a.a.a.b ENSGT00910000144363.g.a.a.a.a.a ENSGT00390000001700.a.b.b.a.b ENSGT00940000161825.v.a.b ENSGT00940000161825.v.a.a.a ENSGT00940000162668 Domestic yak MODERN SPECIES 69 NAA10 (ENSBGRG00000021764) #10 RENBP (ENSBGRG00000021852) HCFC1 (ENSBGRG00000021965) #11 TMEM187 (ENSBGRG00000023012) IRAK1 (ENSBGRG00000023042) #12 MECP2 (ENSBGRG00000023220) #13 ENSBGRG00000023305 #14 TKTL1 (ENSBGRG00000023403) FLNA (ENSBGRG00000023487) GDI1 (ENSBGRG00000023696) #21 EMD (ENSBGRG00000023778) #16 ENSBGRG00000023896 ##17 DNASE1L1 (ENSBGRG00000024010) #18 TAFAZZIN (ENSBGRG00000024079) #19 ATP6AP1 (ENSBGRG00000024299) #20 FAM50A (ENSBGRG00000024395) #22 PLXNA3 (ENSBGRG00000024820) #23 ENSBGRG00000026228 #24 UBL4A (ENSBGRG00000026234) #25 SLC10A3 (ENSBGRG00000026237) #26 G6PD (ENSBGRG00000026248) #28 ENSBGRG00000026272 IKBKG (ENSBGRG00000026284) #29 ENSBGRG00000026304 ##24 ENSBGRG00000026315 ENSBGRG00000026319 ENSBGRG00000026324 ENSBGRG00000026327 ENSBGRG00000026328 ENSBGRG00000026332 ENSBGRG00000026333 Wild yak MODERN SPECIES 2585 ENSBMUG00000026916 ##17 DNASE1L1 (ENSBMUG00000026915) #18 TAFAZZIN (ENSBMUG00000026914) #19 ATP6AP1 (ENSBMUG00000026912) #20 GDI1 (ENSBMUG00000026911) #21 FAM50A (ENSBMUG00000026910) #22 PLXNA3 (ENSBMUG00000026909) #23 LAGE3 (ENSBMUG00000026908) #24 UBL4A (ENSBMUG00000026907) #25 SLC10A3 (ENSBMUG00000026906) #26 G6PD (ENSBMUG00000026905) #28 IKBKG (ENSBMUG00000026904) #29 Bos_b ANCESTRAL SPECIES 31 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.a.b.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT01100000263481.n.a.b.b.a.a.b.b ENSGT00530000063808.a #29 ENSGT00940000160561.d.b ENSGT00410000025802.g.b ##24 ENSGT00960000186859 ENSGT00910000144363.g.a.a.a.a.b ENSGT00910000144363.g.a.a.a.a.a.a.a ENSGT00940000161825.v.a.b ENSGT00390000012182.i.a.a.b Hybrid Bos Indicus MODERN SPECIES 315 HCFC1 (ENSBIXG00005013025) #11 TMEM187 (ENSBIXG00005013053) IRAK1 (ENSBIXG00005013081) #12 ENSBIXG00005013100 MECP2 (ENSBIXG00005013169) #13 ENSBIXG00005013198 #14 TEX28 (ENSBIXG00005013213) #15 TKTL1 (ENSBIXG00005013244) FLNA (ENSBIXG00005013367) EMD (ENSBIXG00005013423) #16 ENSBIXG00005001627 ##17 DNASE1L1 (ENSBIXG00005005490) #18 ENSBIXG00005013746 #19 ATP6AP1 (ENSBIXG00005001714) #20 GDI1 (ENSBIXG00005001727) #21 FAM50A (ENSBIXG00005013872) #22 PLXNA3 (ENSBIXG00005013935) #23 LAGE3 (ENSBIXG00005006122) #24 ENSBIXG00005013979 #25 SLC10A3 (ENSBIXG00005013999) #26 ENSBIXG00005014028 G6PD (ENSBIXG00005014158) #28 IKBKG (ENSBIXG00005014233) #29 ENSBIXG00005000250 ENSBIXG00005014255 ENSBIXG00005001881 ##24 ENSBIXG00005014316 ENSBIXG00005006735 ENSBIXG00005005973 ENSBIXG00005014407 ENSBIXG00005014423 Cow MODERN SPECIES 177 HCFC1 (ENSBTAG00000011904) #11 TMEM187 (ENSBTAG00000008278) IRAK1 (ENSBTAG00000016085) #12 MECP2 (ENSBTAG00000047855) #13 ENSBTAG00000052492 OPN1LW (ENSBTAG00000020299) #14 TEX28 (ENSBTAG00000020300) #15 TKTL1 (ENSBTAG00000020127) FLNA (ENSBTAG00000011190) EMD (ENSBTAG00000022314) #16 RPL10 (ENSBTAG00000007454) ##17 DNASE1L1 (ENSBTAG00000007455) #18 TAFAZZIN (ENSBTAG00000007456) #19 ATP6AP1 (ENSBTAG00000012117) #20 GDI1 (ENSBTAG00000012125) #21 FAM50A (ENSBTAG00000033032) #22 PLXNA3 (ENSBTAG00000008552) #23 LAGE3 (ENSBTAG00000054868) #24 UBL4A (ENSBTAG00000014331) #25 SLC10A3 (ENSBTAG00000014333) #26 FAM3A (ENSBTAG00000012747) #27 G6PD (ENSBTAG00000019512) #28 ENSBTAG00000053534 IKBKG (ENSBTAG00000006268) #29 ENSBTAG00000001900 ENSBTAG00000048914 ##24 ENSBTAG00000055292 ENSBTAG00000053848 ##24 ENSBTAG00000052652 ENSBTAG00000049584 ENSBTAG00000054052 American bison MODERN SPECIES 2327 FAM50A (ENSBBBG00000006443) #22 Siberian musk deer DUPLICATION Siberian musk deer MODERN SPECIES 160 TSPAN8 (ENSMMSG00000004040) ENSMMSG00000004052 #22 ENSMMSG00000004060 LGR5 (ENSMMSG00000004094) ENSMMSG00000004252 ZFC3H1 (ENSMMSG00000004286) THAP2 (ENSMMSG00000004473) TMEM19 (ENSMMSG00000004487) RAB21 (ENSMMSG00000004503) TBC1D15 (ENSMMSG00000004532) TPH2 (ENSMMSG00000006186) TRHDE (ENSMMSG00000006227) Siberian musk deer MODERN SPECIES 14 RENBP (ENSMMSG00000015497) HCFC1 (ENSMMSG00000015453) #11 TMEM187 (ENSMMSG00000015428) IRAK1 (ENSMMSG00000015351) #12 ENSMMSG00000015287 #13 ENSMMSG00000015261 #14 TEX28 (ENSMMSG00000015249) #15 TKTL1 (ENSMMSG00000015211) FLNA (ENSMMSG00000014357) EMD (ENSMMSG00000014247) #16 ENSMMSG00000014213 ##17 ENSMMSG00000014152 #18 TAFAZZIN (ENSMMSG00000014064) #19 ATP6AP1 (ENSMMSG00000014033) #20 GDI1 (ENSMMSG00000013993) #21 ENSMMSG00000013933 #22 PLXNA3 (ENSMMSG00000013876) #23 LAGE3 (ENSMMSG00000013858) #24 UBL4A (ENSMMSG00000013839) #25 SLC10A3 (ENSMMSG00000013825) #26 ENSMMSG00000013656 #27 G6PD (ENSMMSG00000013593) #28 IKBKG (ENSMMSG00000013522) #29 ENSMMSG00000013493 ##24 Cetacea DUPLICATION Cetacea ANCESTRAL SPECIES ENSGT00390000004735.A.m #22 Odontoceti ANCESTRAL SPECIES 19 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A.m #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00410000025802.g.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 Odontoceti_a ANCESTRAL SPECIES 21 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034.i #16 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A.m #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00960000186859 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 Odontoceti_b ANCESTRAL SPECIES 17 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034.i #16 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A.m #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00960000186859 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020.y ENSGT00390000016992.x Monodontidae ANCESTRAL SPECIES 19 ENSGT00950000182824.a.b.b #9 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034.i #16 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A.m #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00960000186859 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020.z ENSGT00390000016992.w Beluga whale MODERN SPECIES 139 ARHGAP4 (ENSDLEG00000010745) #9 RENBP (ENSDLEG00000010782) HCFC1 (ENSDLEG00000010826) #11 TMEM187 (ENSDLEG00000010884) IRAK1 (ENSDLEG00000010892) #12 MECP2 (ENSDLEG00000010908) #13 ENSDLEG00000010916 #14 TKTL1 (ENSDLEG00000010974) FLNA (ENSDLEG00000010999) EMD (ENSDLEG00000011102) #16 ENSDLEG00000011125 ##17 DNASE1L1 (ENSDLEG00000011154) #18 TAZ (ENSDLEG00000011183) #19 ATP6AP1 (ENSDLEG00000011212) #20 GDI1 (ENSDLEG00000011245) #21 FAM50A (ENSDLEG00000011270) #22 PLXNA3 (ENSDLEG00000011331) #23 LAGE3 (ENSDLEG00000011398) #24 UBL4A (ENSDLEG00000011413) #26 FAM3A (ENSDLEG00000011447) #27 G6PD (ENSDLEG00000011468) #28 IKBKG (ENSDLEG00000011500) #29 ENSDLEG00000011523 ENSDLEG00000011545 GAB3 (ENSDLEG00000011559) DKC1 (ENSDLEG00000011603) MPP1 (ENSDLEG00000011647) F8 (ENSDLEG00000011690) ENSDLEG00000011965 ENSDLEG00000011977 FUNDC2 (ENSDLEG00000011985) Narwhal MODERN SPECIES 309 TMEM187 (ENSMMNG00015012935) IRAK1 (ENSMMNG00015012947) #12 MECP2 (ENSMMNG00015012982) #13 ENSMMNG00015013034 #14 ENSMMNG00015013048 ENSMMNG00015013056 TKTL1 (ENSMMNG00015013076) FLNA (ENSMMNG00015013139) ENSMMNG00015013213 #16 ENSMMNG00015013277 ##17 DNASE1L1 (ENSMMNG00015013295) #18 ENSMMNG00015013313 #19 ENSMMNG00015013329 ATP6AP1 (ENSMMNG00015013337) #20 GDI1 (ENSMMNG00015013359) #21 ENSMMNG00015013390 #22 PLXNA3 (ENSMMNG00015013425) #23 LAGE3 (ENSMMNG00015013456) #24 UBL4A (ENSMMNG00015013467) #25 SLC10A3 (ENSMMNG00015013481) #26 FAM3A (ENSMMNG00015013509) #27 G6PD (ENSMMNG00015013556) #28 IKBKG (ENSMMNG00015013582) #29 Vaquita MODERN SPECIES 34 MECP2 (ENSPSNG00000021858) #13 ENSPSNG00000021893 #14 TEX28 (ENSPSNG00000021914) #15 ENSPSNG00000021927 ENSPSNG00000021942 ENSPSNG00000021951 ENSPSNG00000021965 TKTL1 (ENSPSNG00000021994) FLNA (ENSPSNG00000022089) ENSPSNG00000022266 #16 ENSPSNG00000022280 ##17 DNASE1L1 (ENSPSNG00000022297) #18 TAFAZZIN (ENSPSNG00000022306) #19 ATP6AP1 (ENSPSNG00000022314) #20 GDI1 (ENSPSNG00000022323) #21 ENSPSNG00000022331 #22 PLXNA3 (ENSPSNG00000022341) #23 ENSPSNG00000022354 #24 SLC10A3 (ENSPSNG00000022364) #26 FAM3A (ENSPSNG00000022374) #27 G6PD (ENSPSNG00000022382) #28 IKBKG (ENSPSNG00000022395) #29 ENSPSNG00000022407 ENSPSNG00000022414 ENSPSNG00000022416 #24 GAB3 (ENSPSNG00000022421) DKC1 (ENSPSNG00000022426) MPP1 (ENSPSNG00000022439) SMIM9 (ENSPSNG00000022452) F8 (ENSPSNG00000022465) ENSPSNG00000022473 Cetacea ANCESTRAL SPECIES 19 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A.n #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00410000025802.g.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 Odontoceti ANCESTRAL SPECIES ENSGT00390000004735.A.n #22 Odontoceti_a ANCESTRAL SPECIES ENSGT00390000004735.A.n #22 Odontoceti_b ANCESTRAL SPECIES 7 ENSGT00940000158686 ENSGT00940000160413 ENSGT00940000158342.b ENSGT00390000018272 ENSGT00940000157538 ENSGT00730000111039.C ENSGT00500000044938 ENSGT00920000149095.b ENSGT00940000155352 ENSGT00640000091574 ENSGT00950000182839.A.c ENSGT00940000158251 ENSGT00940000162858 ENSGT00940000163725 ENSGT00940000157277 ENSGT00390000004735.A.n #22 ENSGT00940000156144 ENSGT00530000063745.b ENSGT00390000006546 ENSGT01050000244900.a.a.a.a.b ENSGT00940000157479 ENSGT00940000153222.a.a ENSGT00950000182959.a.a ENSGT00950000182959.a.b.b.a ENSGT00940000159215 ENSGT00940000160698 ENSGT00940000154172.ab.b ENSGT00940000156120.a ENSGT00390000000406 ENSGT00940000155394 ENSGT00940000158014 Monodontidae ANCESTRAL SPECIES 6 ENSGT00940000160413 ENSGT00940000158342.b ENSGT00390000012138.a.b.t.bb.a.a.d ENSGT00390000018272 ENSGT00940000157538 ENSGT00730000111039.C ENSGT00500000044938 ENSGT00920000149095.b ENSGT00940000155352 ENSGT00640000091574 ENSGT00950000182839.A.c ENSGT00940000158251 ENSGT00940000162858 ENSGT00940000163725 ENSGT00940000157277 ENSGT00390000004735.A.n #22 ENSGT00940000156144 ENSGT00530000063745.b ENSGT00390000006546 ENSGT01050000244900.a.a.a.a.b ENSGT00940000157479 ENSGT00940000153222.a.a ENSGT00950000182959.a.a ENSGT00950000182959.a.b.b.a ENSGT00940000159215 ENSGT00940000160698 ENSGT00940000154172.ab.b ENSGT00940000156120.a ENSGT00390000000406 ENSGT00940000155394 ENSGT00940000158014 Narwhal MODERN SPECIES 313 POC1B (ENSMMNG00015021321) DUSP6 (ENSMMNG00015021301) ENSMMNG00015021288 KITLG (ENSMMNG00015021271) TMTC3 (ENSMMNG00015021249) CEP290 (ENSMMNG00015021183) C12orf29 (ENSMMNG00015021146) C12orf50 (ENSMMNG00015021109) MGAT4C (ENSMMNG00015021064) NTS (ENSMMNG00015021038) RASSF9 (ENSMMNG00015021023) ALX1 (ENSMMNG00015020997) LRRIQ1 (ENSMMNG00015020965) TSPAN19 (ENSMMNG00015020883) SLC6A15 (ENSMMNG00015020847) FAM50A (ENSMMNG00015020820) #22 TMTC2 (ENSMMNG00015020798) METTL25 (ENSMMNG00015020747) CCDC59 (ENSMMNG00015020720) PPFIA2 (ENSMMNG00015020218) ACSS3 (ENSMMNG00015019853) ENSMMNG00015019830 LIN7A (ENSMMNG00015019774) MYF5 (ENSMMNG00015019736) MYF6 (ENSMMNG00015019715) PTPRQ (ENSMMNG00015019359) OTOGL (ENSMMNG00015018567) ENSMMNG00015018420 PPP1R12A (ENSMMNG00015018194) ENSMMNG00015018085 PAWR (ENSMMNG00015018035) Beluga whale MODERN SPECIES 38 POC1B (ENSDLEG00000005012) DUSP6 (ENSDLEG00000005047) ENSDLEG00000005056 KITLG (ENSDLEG00000005063) TMTC3 (ENSDLEG00000005092) CEP290 (ENSDLEG00000005127) CUNH12orf29 (ENSDLEG00000005151) C12orf50 (ENSDLEG00000005169) MGAT4C (ENSDLEG00000005205) NTS (ENSDLEG00000005212) RASSF9 (ENSDLEG00000005216) ALX1 (ENSDLEG00000005225) LRRIQ1 (ENSDLEG00000005238) TSPAN19 (ENSDLEG00000005256) SLC6A15 (ENSDLEG00000005270) FAM50A (ENSDLEG00000005280) #22 TMTC2 (ENSDLEG00000005298) METTL25 (ENSDLEG00000005328) CCDC59 (ENSDLEG00000005346) ENSDLEG00000005352 Vaquita MODERN SPECIES 1 DUSP6 (ENSPSNG00000004604) KITLG (ENSPSNG00000004647) TMTC3 (ENSPSNG00000004690) CEP290 (ENSPSNG00000004767) C12orf29 (ENSPSNG00000004829) C12orf50 (ENSPSNG00000004876) MGAT4C (ENSPSNG00000004935) NTS (ENSPSNG00000004962) RASSF9 (ENSPSNG00000004990) ALX1 (ENSPSNG00000005010) LRRIQ1 (ENSPSNG00000005070) TSPAN19 (ENSPSNG00000005188) SLC6A15 (ENSPSNG00000005229) ENSPSNG00000005260 TMTC2 (ENSPSNG00000005299) FAM50A (ENSPSNG00000005402) #22 METTL25 (ENSPSNG00000005420) ENSPSNG00000005450 PPFIA2 (ENSPSNG00000005685) ACSS3 (ENSPSNG00000006403) LIN7A (ENSPSNG00000006484) MYF5 (ENSPSNG00000006510) MYF6 (ENSPSNG00000006531) PTPRQ (ENSPSNG00000006652) OTOGL (ENSPSNG00000007188) PPP1R12A (ENSPSNG00000008207) ENSPSNG00000008403 PAWR (ENSPSNG00000008439) SYT1 (ENSPSNG00000008513) ENSPSNG00000008562 NAV3 (ENSPSNG00000009074) Dolphin MODERN SPECIES 6810 ENSTTRG00000011407 ##17 DNASE1L1 (ENSTTRG00000011408) #18 TAFAZZIN (ENSTTRG00000011410) #19 ATP6AP1 (ENSTTRG00000011434) #20 GDI1 (ENSTTRG00000011454) #21 FAM50A (ENSTTRG00000011462) #22 PLXNA3 (ENSTTRG00000011474) #23 Sperm whale MODERN SPECIES 13 VBP1 (ENSPCTG00005016073) BRCC3 (ENSPCTG00005015822) MTCP1 (ENSPCTG00005015780) CMC4 (ENSPCTG00005015746) FUNDC2 (ENSPCTG00005015711) F8A1 (ENSPCTG00005015687) ENSPCTG00005015667 F8 (ENSPCTG00005015296) SMIM9 (ENSPCTG00005015221) MPP1 (ENSPCTG00005014958) DKC1 (ENSPCTG00005014862) GAB3 (ENSPCTG00005014727) ENSPCTG00005014674 ##24 IKBKG (ENSPCTG00005014430) #29 GDI1 (ENSPCTG00005014385) #21 FAM50A (ENSPCTG00005014324) #22 PLXNA3 (ENSPCTG00005014209) #23 ENSPCTG00005014136 #24 UBL4A (ENSPCTG00005014090) #25 SLC10A3 (ENSPCTG00005014048) #26 FAM3A (ENSPCTG00005013803) #28 DNASE1L1 (ENSPCTG00005013759) #18 RPL10 (ENSPCTG00005013674) ##17 EMD (ENSPCTG00005013517) #16 FLNA (ENSPCTG00005012993) TKTL1 (ENSPCTG00005012476) ENSPCTG00005022081 TEX28 (ENSPCTG00005022073) #15 ENSPCTG00005022067 #14 MECP2 (ENSPCTG00005022045) #13 ENSPCTG00005022009 #12 Blue whale DUPLICATION Blue whale MODERN SPECIES 40 TMEM187 (ENSBMSG00010019836) IRAK1 (ENSBMSG00010019854) #12 MECP2 (ENSBMSG00010019964) #13 ENSBMSG00010020090 #14 TEX28 (ENSBMSG00010020541) #15 ENSBMSG00010020592 FLNA (ENSBMSG00010020850) EMD (ENSBMSG00010021072) #16 ENSBMSG00010021096 ENSBMSG00010021119 ENSBMSG00010021148 ##17 DNASE1L1 (ENSBMSG00010021173) #18 TAFAZZIN (ENSBMSG00010021182) #19 ATP6AP1 (ENSBMSG00010021220) #20 GDI1 (ENSBMSG00010021239) #21 ENSBMSG00010021250 #22 PLXNA3 (ENSBMSG00010021267) #23 LAGE3 (ENSBMSG00010021278) #24 UBL4A (ENSBMSG00010021291) #25 SLC10A3 (ENSBMSG00010021301) #26 FAM3A (ENSBMSG00010021308) #27 G6PD (ENSBMSG00010021326) #28 IKBKG (ENSBMSG00010021344) #29 ENSBMSG00010021370 ENSBMSG00010021382 ENSBMSG00010021407 DKC1 (ENSBMSG00010021430) MPP1 (ENSBMSG00010021484) SMIM9 (ENSBMSG00010021513) F8 (ENSBMSG00010021526) ENSBMSG00010021588 Blue whale MODERN SPECIES MYSM1 (ENSBMSG00010001159) JUN (ENSBMSG00010001187) FGGY (ENSBMSG00010001218) HOOK1 (ENSBMSG00010001303) CYP2J2 (ENSBMSG00010001319) ENSBMSG00010001338 NFIA (ENSBMSG00010001455) TM2D1 (ENSBMSG00010001753) PATJ (ENSBMSG00010001826) ENSBMSG00010002038 KANK4 (ENSBMSG00010002062) ENSBMSG00010002165 ENSBMSG00010002182 DOCK7 (ENSBMSG00010002212) ANGPTL3 (ENSBMSG00010002379) ENSBMSG00010002413 #22 ENSBMSG00010002428 FOXD3 (ENSBMSG00010002458) ALG6 (ENSBMSG00010002470) ITGB3BP (ENSBMSG00010002488) ENSBMSG00010002519 EFCAB7 (ENSBMSG00010002542) PGM1 (ENSBMSG00010002593) ROR1 (ENSBMSG00010002655) UBE2U (ENSBMSG00010002698) CACHD1 (ENSBMSG00010002730) RAVER2 (ENSBMSG00010002835) JAK1 (ENSBMSG00010002874) ENSBMSG00010003046 ENSBMSG00010003053 ENSBMSG00010003064 Laurasiatheria_b ANCESTRAL SPECIES 10 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT01050000244815.B.a.a ENSGT00410000025802.h ##24 ENSGT00410000025802.g.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Carnivora ANCESTRAL SPECIES 11 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00410000025802.h ##24 ENSGT00410000025802.g.b ##24 ENSGT01050000244815.B.a.a ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Felidae ANCESTRAL SPECIES 29 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744.m ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f Panthera ANCESTRAL SPECIES 65 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 Panthera_a ANCESTRAL SPECIES 76 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 leopard MODERN SPECIES 303 ENSPPRG00000021464 ##17 DNASE1L1 (ENSPPRG00000021313) #18 TAFAZZIN (ENSPPRG00000020887) #19 ATP6AP1 (ENSPPRG00000020575) #20 GDI1 (ENSPPRG00000020392) #21 FAM50A (ENSPPRG00000020113) #22 ENSPPRG00000019153 #25 SLC10A3 (ENSPPRG00000018639) #26 FAM3A (ENSPPRG00000018526) #27 G6PD (ENSPPRG00000018173) #28 IKBKG (ENSPPRG00000017843) #29 lion MODERN SPECIES 113 ENSPLOG00000007204 #17 DNASE1L1 (ENSPLOG00000007262) #18 ENSPLOG00000007302 #19 ATP6AP1 (ENSPLOG00000007351) #20 GDI1 (ENSPLOG00000007386) #21 FAM50A (ENSPLOG00000007410) #22 PLXNA3 (ENSPLOG00000007506) #23 LAGE3 (ENSPLOG00000007855) #24 SLC10A3 (ENSPLOG00000007885) #26 FAM3A (ENSPLOG00000007925) #27 G6PD (ENSPLOG00000008022) #28 IKBKG (ENSPLOG00000008081) #29 Cat MODERN SPECIES 252 RENBP (ENSFCAG00000018690) HCFC1 (ENSFCAG00000011387) #11 TMEM187 (ENSFCAG00000011388) IRAK1 (ENSFCAG00000010847) #12 MECP2 (ENSFCAG00000011389) #13 OPN1LW (ENSFCAG00000011390) #14 TEX28 (ENSFCAG00000044525) #15 TKTL1 (ENSFCAG00000011392) FLNA (ENSFCAG00000011393) EMD (ENSFCAG00000011394) #16 ENSFCAG00000011395 #17 DNASE1L1 (ENSFCAG00000011396) #18 TAFAZZIN (ENSFCAG00000023652) #19 ATP6AP1 (ENSFCAG00000011397) #20 GDI1 (ENSFCAG00000011398) #21 FAM50A (ENSFCAG00000011399) #22 PLXNA3 (ENSFCAG00000011400) #23 LAGE3 (ENSFCAG00000038204) #24 UBL4A (ENSFCAG00000025607) #25 SLC10A3 (ENSFCAG00000022989) #26 FAM3A (ENSFCAG00000035237) #27 G6PD (ENSFCAG00000043880) #28 IKBKG (ENSFCAG00000029840) #29 ENSFCAG00000048808 GAB3 (ENSFCAG00000006576) DKC1 (ENSFCAG00000006577) MPP1 (ENSFCAG00000006578) SMIM9 (ENSFCAG00000040693) F8 (ENSFCAG00000048336) ENSFCAG00000045185 FUNDC2 (ENSFCAG00000031335) Caniformia ANCESTRAL SPECIES 22 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00390000002034 #16 ENSGT00940000153588.b ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00410000025802.h ##24 ENSGT00410000025802.g.b ##24 ENSGT01050000244815.B.a.a ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000163020 Canidae ANCESTRAL SPECIES 50 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00390000002034 #16 ENSGT00940000153588.b ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT01050000244815.B.a.a ENSGT00410000025802.h ##24 ENSGT00410000025802.g.b ##24 ENSGT00940000159803 ENSGT00510000047092.a ENSGT00940000158744 ENSGT00940000163020 ENSGT00390000016992 Canis_lupus ANCESTRAL SPECIES 22 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00390000002034 #16 ENSGT00940000153588.b ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a.g #24 ENSGT00410000025802.g.a.h #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT01050000244815.B.a.a ENSGT00410000025802.h ##24 ENSGT00410000025802.g.b.k ##24 ENSGT00940000159803 ENSGT00510000047092.a ENSGT00940000158744 ENSGT00940000163020 Dog MODERN SPECIES 144 RENBP (ENSCAFG00845026554) #10 HCFC1 (ENSCAFG00845026790) #11 TMEM187 (ENSCAFG00845027090) IRAK1 (ENSCAFG00845027126) #12 MECP2 (ENSCAFG00845027255) #13 OPN1LW (ENSCAFG00845027363) #14 TEX28 (ENSCAFG00845027400) #15 TKTL1 (ENSCAFG00845027442) EMD (ENSCAFG00845027618) #16 FLNA (ENSCAFG00845027901) RPL10 (ENSCAFG00845028627) #17 DNASE1L1 (ENSCAFG00845028675) #18 TAZ (ENSCAFG00845028739) #19 GDI1 (ENSCAFG00845028921) #21 ATP6AP1 (ENSCAFG00845029004) #20 FAM50A (ENSCAFG00845029041) #22 PLXNA3 (ENSCAFG00845029121) #23 ENSCAFG00845029273 #24 UBL4A (ENSCAFG00845029287) #25 SLC10A3 (ENSCAFG00845029316) #26 ENSCAFG00845029578 #27 G6PD (ENSCAFG00845029388) #28 IKBKG (ENSCAFG00845029634) #29 cOR7R1 (ENSCAFG00845029673) ENSCAFG00845029686 ##24 ENSCAFG00845029697 ##24 LAGE3 (ENSCAFG00845029708) #24 ENSCAFG00845029817 ##24 DKC1 (ENSCAFG00845029852) MPP1 (ENSCAFG00845029936) F8 (ENSCAFG00845030098) Dingo MODERN SPECIES 383 RENBP (ENSCAFG00020022111) HCFC1 (ENSCAFG00020022091) #11 IRAK1 (ENSCAFG00020022089) #12 MECP2 (ENSCAFG00020022079) #13 ENSCAFG00020022061 #14 TEX28 (ENSCAFG00020022059) #15 ENSCAFG00020022055 TKTL1 (ENSCAFG00020022053) EMD (ENSCAFG00020022046) #16 FLNA (ENSCAFG00020009434) ENSCAFG00020009114 #17 DNASE1L1 (ENSCAFG00020009104) #18 TAFAZZIN (ENSCAFG00020009089) #19 ATP6AP1 (ENSCAFG00020009077) #20 GDI1 (ENSCAFG00020009070) #21 FAM50A (ENSCAFG00020009064) #22 PLXNA3 (ENSCAFG00020009040) #23 ENSCAFG00020009037 #24 UBL4A (ENSCAFG00020009032) #25 SLC10A3 (ENSCAFG00020009027) #26 FAM3A (ENSCAFG00020009021) #27 G6PD (ENSCAFG00020008999) #28 IKBKG (ENSCAFG00020008992) #29 ENSCAFG00020008988 ENSCAFG00020008985 ENSCAFG00020008976 ##24 ENSCAFG00020008968 #24 ENSCAFG00020008959 ##24 ENSCAFG00020008942 ENSCAFG00020008918 MPP1 (ENSCAFG00020008744) Red fox MODERN SPECIES 263 RENBP (ENSVVUG00000029602) HCFC1 (ENSVVUG00000029596) #11 TMEM187 (ENSVVUG00000029595) IRAK1 (ENSVVUG00000029594) #12 MECP2 (ENSVVUG00000029591) #13 ENSVVUG00000029585 #14 TKTL1 (ENSVVUG00000029580) TEX28 (ENSVVUG00000029579) #15 EMD (ENSVVUG00000029577) #16 FLNA (ENSVVUG00000029569) RPL10 (ENSVVUG00000029559) #17 DNASE1L1 (ENSVVUG00000029556) #18 TAZ (ENSVVUG00000029551) #19 ATP6AP1 (ENSVVUG00000029548) #20 GDI1 (ENSVVUG00000029546) #21 ENSVVUG00000029545 #22 PLXNA3 (ENSVVUG00000029541) #23 SLC10A3 (ENSVVUG00000029540) #26 FAM3A (ENSVVUG00000029538) #27 G6PD (ENSVVUG00000029537) #28 IKBKG (ENSVVUG00000029536) #29 Caniformia_b ANCESTRAL SPECIES 27 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.h ##24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT01030000235238.c ENSGT00410000025802.g.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f Mustelinae ANCESTRAL SPECIES 108 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00410000025802.h ##24 Ferret DUPLICATION Ferret MODERN SPECIES 531 HCFC1 (ENSMPUG00000009029) #11 ENSMPUG00000009052 IRAK1 (ENSMPUG00000009059) #12 MECP2 (ENSMPUG00000009072) #13 ENSMPUG00000009081 #14 TEX28 (ENSMPUG00000009202) #15 TKTL1 (ENSMPUG00000009214) ENSMPUG00000019510 EMD (ENSMPUG00000009232) #16 FLNA (ENSMPUG00000009293) ENSMPUG00000009320 #17 DNASE1L1 (ENSMPUG00000009354) #18 TAFAZZIN (ENSMPUG00000009363) #19 ATP6AP1 (ENSMPUG00000009450) #20 GDI1 (ENSMPUG00000009461) #21 ENSMPUG00000009476 #22 PLXNA3 (ENSMPUG00000009629) #23 UBL4A (ENSMPUG00000009650) #25 SLC10A3 (ENSMPUG00000019511) #26 FAM3A (ENSMPUG00000009671) #27 G6PD (ENSMPUG00000009722) #28 IKBKG (ENSMPUG00000009835) #29 ENSMPUG00000009840 ENSMPUG00000019515 Ferret MODERN SPECIES 169 ENSMPUG00000005043 VRK2 (ENSMPUG00000005056) FANCL (ENSMPUG00000005063) ENSMPUG00000018814 ENSMPUG00000005122 ENSMPUG00000005129 ENSMPUG00000005140 #22 ENSMPUG00000005161 PAPOLG (ENSMPUG00000005165) REL (ENSMPUG00000005180) PUS10 (ENSMPUG00000005185) ENSMPUG00000005228 SANBR (ENSMPUG00000005235) ENSMPUG00000005244 USP34 (ENSMPUG00000005248) XPO1 (ENSMPUG00000005560) FAM161A (ENSMPUG00000005585) CCT4 (ENSMPUG00000005615) COMMD1 (ENSMPUG00000005842) B3GNT2 (ENSMPUG00000018818) ENSMPUG00000005847 TMEM17 (ENSMPUG00000005851) Ursidae ANCESTRAL SPECIES 45 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00390000002034 #16 ENSGT00940000153588.b ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.h ##24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00410000025802.g.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744.p ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000013102.f Ursus ANCESTRAL SPECIES 220 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00410000025802.h ##24 Polar bear MODERN SPECIES 330 NAA10 (ENSUMAG00000020773) #10 RENBP (ENSUMAG00000020768) ENSUMAG00000020761 TMEM187 (ENSUMAG00000020759) ENSUMAG00000020747 #13 ENSUMAG00000020714 #14 TEX28 (ENSUMAG00000020707) #15 TKTL1 (ENSUMAG00000020693) EMD (ENSUMAG00000020684) #16 FLNA (ENSUMAG00000019645) ENSUMAG00000019583 ##17 DNASE1L1 (ENSUMAG00000019505) #18 ENSUMAG00000019531 #19 ATP6AP1 (ENSUMAG00000019476) #20 GDI1 (ENSUMAG00000019473) #21 FAM50A (ENSUMAG00000019470) #22 SLC10A3 (ENSUMAG00000019457) #26 FAM3A (ENSUMAG00000019452) #27 G6PD (ENSUMAG00000019300) #28 IKBKG (ENSUMAG00000019273) #29 ENSUMAG00000019269 ##24 ENSUMAG00000019262 Giant Panda MODERN SPECIES 2288 HCFC1 (ENSAMEG00000018450) #11 TMEM187 (ENSAMEG00000019206) IRAK1 (ENSAMEG00000018449) #12 MECP2 (ENSAMEG00000029148) #13 ENSAMEG00000018445 #14 TEX28 (ENSAMEG00000018444) #15 ENSAMEG00000018441 ENSAMEG00000007222 #16 ENSAMEG00000007261 ENSAMEG00000030923 RPL10 (ENSAMEG00000000227) #17 ENSAMEG00000000229 #18 ENSAMEG00000000230 #19 ATP6AP1 (ENSAMEG00000000239) #20 GDI1 (ENSAMEG00000000265) #21 FAM50A (ENSAMEG00000000273) #22 PLXNA3 (ENSAMEG00000000281) #23 ENSAMEG00000026988 ##24 UBL4A (ENSAMEG00000026286) #25 SLC10A3 (ENSAMEG00000000359) #26 FAM3A (ENSAMEG00000000362) #27 G6PD (ENSAMEG00000000366) #28 IKBKG (ENSAMEG00000000410) #29 ENSAMEG00000019272 ENSAMEG00000019282 GAB3 (ENSAMEG00000001366) DKC1 (ENSAMEG00000002776) MPP1 (ENSAMEG00000002802) SMIM9 (ENSAMEG00000028154) F8 (ENSAMEG00000002491) ENSAMEG00000028778 Laurasiatheria_c ANCESTRAL SPECIES 10 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00410000025802.g.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 Equus ANCESTRAL SPECIES 52 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00410000025802.g.b.n ##24 ENSGT00410000025802.g.b.m ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f Donkey MODERN SPECIES 36 RENBP (ENSEASG00005019286) HCFC1 (ENSEASG00005019244) #11 TMEM187 (ENSEASG00005038494) IRAK1 (ENSEASG00005019196) #12 MECP2 (ENSEASG00005019188) #13 ENSEASG00005019183 #14 TEX28 (ENSEASG00005019182) #15 TKTL1 (ENSEASG00005019179) FLNA (ENSEASG00005018577) EMD (ENSEASG00005019177) #16 ENSEASG00005025120 #17 DNASE1L1 (ENSEASG00005028299) #18 TAFAZZIN (ENSEASG00005025100) #19 ATP6AP1 (ENSEASG00005034458) #20 GDI1 (ENSEASG00005018454) #21 FAM50A (ENSEASG00005018449) #22 PLXNA3 (ENSEASG00005018440) #23 UBL4A (ENSEASG00005018436) #25 SLC10A3 (ENSEASG00005018434) #26 FAM3A (ENSEASG00005018431) #27 G6PD (ENSEASG00005018430) #28 ENSEASG00005032513 #29 ENSEASG00005032016 ##24 ENSEASG00005027434 ENSEASG00005031374 ENSEASG00005028284 ENSEASG00005034297 ##24 ENSEASG00005032503 ##24 ENSEASG00005033034 ENSEASG00005007484 MPP1 (ENSEASG00005007482) Horse MODERN SPECIES 480 RENBP (ENSECAG00000018888) HCFC1 (ENSECAG00000022440) #11 TMEM187 (ENSECAG00000001086) IRAK1 (ENSECAG00000009585) #12 MECP2 (ENSECAG00000018208) #13 OPN1LW (ENSECAG00000018684) #14 TEX28 (ENSECAG00000021904) #15 TKTL1 (ENSECAG00000021992) EMD (ENSECAG00000013908) #16 FLNA (ENSECAG00000009550) RPL10 (ENSECAG00000017154) ##17 DNASE1L1 (ENSECAG00000003758) #18 TAFAZZIN (ENSECAG00000010872) #19 ATP6AP1 (ENSECAG00000014216) #20 GDI1 (ENSECAG00000017687) #21 FAM50A (ENSECAG00000023594) #22 PLXNA3 (ENSECAG00000025088) #23 LAGE3 (ENSECAG00000038130) #24 UBL4A (ENSECAG00000013506) #25 SLC10A3 (ENSECAG00000013796) #26 FAM3A (ENSECAG00000013840) #27 G6PD (ENSECAG00000014994) #28 IKBKG (ENSECAG00000020595) #29 ENSECAG00000033189 ENSECAG00000029643 ##24 ENSECAG00000056189 ENSECAG00000031652 ##24 GAB3 (ENSECAG00000023348) DKC1 (ENSECAG00000023524) MPP1 (ENSECAG00000009595) F8 (ENSECAG00000015044) Chiroptera ANCESTRAL SPECIES 48 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.a.a ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00410000025802.g.b ##24 ENSGT01050000244815.B.a.a ENSGT01030000238159 ENSGT00410000025802.h ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 Microchiroptera ANCESTRAL SPECIES 45 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.a.a ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00410000025802.g.b ##24 ENSGT01050000244815.B.a.a ENSGT01030000238159 ENSGT00410000025802.h ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00940000160294 Microbat DUPLICATION Microbat MODERN SPECIES 1349 EIF3L (ENSMLUG00000028617) ENSMLUG00000014301 C22orf23 (ENSMLUG00000029482) ENSMLUG00000014315 SOX10 (ENSMLUG00000014317) PICK1 (ENSMLUG00000016795) SLC16A8 (ENSMLUG00000016804) BAIAP2L2 (ENSMLUG00000026542) PLA2G6 (ENSMLUG00000012355) MAFF (ENSMLUG00000011358) TMEM184B (ENSMLUG00000011364) CSNK1E (ENSMLUG00000011391) KCNJ4 (ENSMLUG00000008623) KDELR3 (ENSMLUG00000013148) DDX17 (ENSMLUG00000013151) ENSMLUG00000030689 #22 DMC1 (ENSMLUG00000013162) Microbat MODERN SPECIES 977 RENBP (ENSMLUG00000014271) HCFC1 (ENSMLUG00000014275) #11 TMEM187 (ENSMLUG00000014286) IRAK1 (ENSMLUG00000014288) #12 MECP2 (ENSMLUG00000014297) #13 ENSMLUG00000024727 ENSMLUG00000014299 #14 TEX28 (ENSMLUG00000014304) #15 TKTL1 (ENSMLUG00000014306) EMD (ENSMLUG00000005200) #16 FLNA (ENSMLUG00000014316) ENSMLUG00000014337 ##17 DNASE1L1 (ENSMLUG00000014342) #18 TAFAZZIN (ENSMLUG00000024037) #19 ATP6AP1 (ENSMLUG00000003493) #20 ENSMLUG00000022234 #22 GDI1 (ENSMLUG00000003501) #21 PLXNA3 (ENSMLUG00000010006) #23 ENSMLUG00000030030 #24 UBL4A (ENSMLUG00000027145) #25 SLC10A3 (ENSMLUG00000008199) #26 FAM3A (ENSMLUG00000005226) #27 G6PD (ENSMLUG00000008210) #28 IKBKG (ENSMLUG00000027075) #29 ENSMLUG00000025335 Greater horseshoe bat MODERN SPECIES RENBP (ENSRFEG00010004689) HCFC1 (ENSRFEG00010004542) #11 TMEM187 (ENSRFEG00010004460) IRAK1 (ENSRFEG00010004369) #12 MECP2 (ENSRFEG00010004285) #13 ENSRFEG00010004230 #14 TEX28 (ENSRFEG00010004212) #15 TKTL1 (ENSRFEG00010004159) FLNA (ENSRFEG00010004101) EMD (ENSRFEG00010004008) #16 RPL10 (ENSRFEG00010003909) ##17 BT_m006_jsm59FD5r (ENSRFEG00010003791) #18 TAZ (ENSRFEG00010003720) #19 ATP6AP1 (ENSRFEG00010003617) #20 GDI1 (ENSRFEG00010003480) #21 FAM50A (ENSRFEG00010003417) #22 PLXNA3 (ENSRFEG00010003374) #23 LAGE3 (ENSRFEG00010003340) #24 UBL4A (ENSRFEG00010003315) #25 SLC10A3 (ENSRFEG00010003285) #26 FAM3A (ENSRFEG00010003196) #27 G6PD (ENSRFEG00010003111) #28 IKBKG (ENSRFEG00010003030) #29 ENSRFEG00010002995 ##24 ENSRFEG00010002963 ##24 ENSRFEG00010002921 ENSRFEG00010002889 ENSRFEG00010002860 ##24 GAB3 (ENSRFEG00010002752) DKC1 (ENSRFEG00010002621) MPP1 (ENSRFEG00010002502) Megabat MODERN SPECIES 3437 EMD (ENSPVAG00000003741) #16 FLNA (ENSPVAG00000003735) ENSPVAG00000003734 #22 Sauria ANCESTRAL SPECIES ENSGT00390000004735.A #22 Archelosauria ANCESTRAL SPECIES ENSGT00390000004735.A #22 Archosauria ANCESTRAL SPECIES ENSGT00390000004735.A #22 Aves ANCESTRAL SPECIES ENSGT00390000004735.A #22 Neognathae ANCESTRAL SPECIES ENSGT00390000004735.A #22 Neognathae_b ANCESTRAL SPECIES ENSGT00390000004735.A #22 Neognathae_c ANCESTRAL SPECIES ENSGT00390000004735.A #22 Kakapo MODERN SPECIES 27 ENSSHBG00005008463 WDR45 (ENSSHBG00005008450) ENSSHBG00005008422 ENSSHBG00005008400 #22 ENSSHBG00005008388 #27 ENSSHBG00005008249 #28 IKBKG (ENSSHBG00005008187) #29 ENSSHBG00005008159 SEPHS2 (ENSSHBG00005008143) ENSSHBG00005008129 SLC35A2 (ENSSHBG00005008109) PORCN (ENSSHBG00005008085) ENSSHBG00005008057 GATA1 (ENSSHBG00005008065) ENSSHBG00005008000 #28 ENSSHBG00005007974 #27 UBL4A (ENSSHBG00005007963) #25 ENSSHBG00005007944 ##22 ATP6AP1 (ENSSHBG00005007878) #20 Galloanserae ANCESTRAL SPECIES ENSGT00390000004735.A #22 Phasianidae ANCESTRAL SPECIES ENSGT00390000004735.A #22 Japanese quail MODERN SPECIES 144 ENSCJPG00005000494 #22 ENSCJPG00005000493 #25 Actinopterygii ANCESTRAL SPECIES ENSGT00390000004735.A #22 Neopterygii ANCESTRAL SPECIES ENSGT00390000004735.A #22 Osteoglossocephalai ANCESTRAL SPECIES ENSGT00390000004735.A #22 Osteoglossiformes ANCESTRAL SPECIES ENSGT00390000004735.A #22 P. kingsleyae MODERN SPECIES 137 slc6a22.1 (ENSPKIG00000004830) slc6a22.2 (ENSPKIG00000004779) oard1 (ENSPKIG00000004754) apobec2a (ENSPKIG00000004741) itpr3 (ENSPKIG00000004648) ENSPKIG00000004584 FRS3 (ENSPKIG00000004553) ENSPKIG00000004541 RAB7B (ENSPKIG00000004522) ppil1 (ENSPKIG00000004501) ENSPKIG00000004464 celsr2 (ENSPKIG00000004409) ENSPKIG00000004386 sars1 (ENSPKIG00000004342) alas2 (ENSPKIG00000004306) FAM50A (ENSPKIG00000004275) #22 ENSPKIG00000004252 vgll4l (ENSPKIG00000004235) syn1 (ENSPKIG00000004211) araf (ENSPKIG00000004179) ENSPKIG00000004164 imp4 (ENSPKIG00000004119) mdh2 (ENSPKIG00000004090) mdh2 (ENSPKIG00000004080) Elephant shark MODERN SPECIES 1107 ENSCMIG00000001090 #22 Bilateria ANCESTRAL SPECIES ENSGT00390000004735.B ##22 Ecdysozoa ANCESTRAL SPECIES ENSGT00390000004735.B ##22 Fruitfly MODERN SPECIES 19 CG4849 (FBgn0039566) CG31131 (FBgn0051131) CG31253 (FBgn0051253) CG42487 (FBgn0259990) CG4884 (FBgn0039565) Nep7 (FBgn0039564) CG4951 (FBgn0039563) Gp93 (FBgn0039562) mfrn (FBgn0039561) BOD1 (FBgn0039560) NSD (FBgn0039559) nenya (FBgn0051053) mino (FBgn0027579) RpL4 (FBgn0003279) BCAS2 (FBgn0039558) CG12259 (FBgn0039557) ##22 Boh1 (FBgn0053213) mRpS22 (FBgn0039555) CG5003 (FBgn0039554) mil (FBgn0267366) CG12426 (FBgn0039552) Or98a (FBgn0039551) CG34353 (FBgn0085382) Ets98B (FBgn0005659) CG12877 (FBgn0039544) CROT (FBgn0039543) btz (FBgn0045862) ALiX (FBgn0086346) HSPBAP1 (FBgn0263025) Acp98AB (FBgn0263597) CG43319 (FBgn0263024) Chordata ANCESTRAL SPECIES ENSGT00390000004735.B ##22 Vertebrata ANCESTRAL SPECIES ENSGT00390000004735.B ##22 Gnathostomata ANCESTRAL SPECIES ENSGT00390000004735.B ##22 Euteleostomi ANCESTRAL SPECIES ENSGT00390000004735.B ##22 Sarcopterygii ANCESTRAL SPECIES ENSGT00390000004735.B ##22 Tetrapoda ANCESTRAL SPECIES ENSGT00390000004735.B ##22 Amniota ANCESTRAL SPECIES ENSGT00390000004735.B ##22 Mammalia ANCESTRAL SPECIES ENSGT00390000004735.B ##22 Theria ANCESTRAL SPECIES ENSGT00390000004735.B ##22 Eutheria ANCESTRAL SPECIES 30 ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000175246 ENSGT00940000154150 ENSGT00940000167417 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 Boreoeutheria ANCESTRAL SPECIES 7 ENSGT00940000156211.b ENSGT01000000215059 ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000175246 ENSGT00940000154150 ENSGT00940000167417 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 Euarchontoglires ANCESTRAL SPECIES 7 ENSGT00940000156211.b ENSGT01000000215059 ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154519.g.b ENSGT00940000154931 ENSGT00940000154519.h ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000175246 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 Euarchontoglires_A ANCESTRAL SPECIES 6 ENSGT00440000033640 ENSGT00940000156211.b ENSGT01000000215059 ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519.g.b ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000175246 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 Glires ANCESTRAL SPECIES 5 ENSGT00440000033640 ENSGT00940000156211.b ENSGT01000000215059 ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519.g.b ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000175246 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 Rodentia ANCESTRAL SPECIES 6 ENSGT00440000033640 ENSGT00940000156211.b ENSGT01000000215059 ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931.d ENSGT00940000154519.g.b ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000175246 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 Rodentia_B ANCESTRAL SPECIES 8 ENSGT00440000033640 ENSGT00940000156211.b ENSGT01000000215059 ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931.d ENSGT00940000154519.g.b ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000175246 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 Myomorpha ANCESTRAL SPECIES 11 ENSGT00440000033640 ENSGT00940000156211.b ENSGT01000000215059 ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931.d ENSGT00940000154519.g.b ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000175246 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 Muroidea ANCESTRAL SPECIES 15 ENSGT00440000033640 ENSGT00940000156211.b ENSGT01000000215059 ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931.d ENSGT00940000154519.g.b ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000175246 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 Muroidea_A ANCESTRAL SPECIES 14 ENSGT00940000156211.b ENSGT00390000008538 ENSGT01000000215059 ENSGT00940000154573 ENSGT00940000154931.d ENSGT00940000154519.g.b.a ENSGT00940000154519.g.b.b ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000175246 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105.r ENSGT00940000155105.q ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a Murinae ANCESTRAL SPECIES 21 ENSGT01000000215059 ENSGT00940000154573.k.a ENSGT00940000154573.l ENSGT00940000154519.g.b.a.b ENSGT00940000154931.d.o.a.a ENSGT00940000154931.d.o.a.b ENSGT00940000154573.k.b ENSGT00940000154519.g.b.b ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105.r ENSGT00940000155105.q ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a Mus ANCESTRAL SPECIES 18 ENSGT00940000154519.g.b.a.b ENSGT00940000154931.d.o.a.a ENSGT00940000154931.d.p ENSGT00940000154931.d.o.b ENSGT00940000154519.g.b.a.a.a.b.a ENSGT00940000154519.g.b.a.a.b.a ENSGT00940000154519.g.b.a.a.a.a ENSGT00940000154519.g.b.b ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105.q.b ENSGT00940000155105.q.a ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a Mus_A ANCESTRAL SPECIES 14 ENSGT00940000154573.k.b ENSGT00940000154931.d.o.a.b ENSGT00940000154573.l ENSGT00940000154519.g.b.a.b ENSGT00940000154931.d.o.a.a ENSGT00940000154519.g.a ENSGT00940000154519.g.b.a.a.a.a ENSGT00940000154519.g.b.b ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105.q.b ENSGT00940000155105.q.a ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a Mus_B ANCESTRAL SPECIES 13 ENSGT00940000154573.k.b ENSGT00940000154931.d.p ENSGT00940000154931.d.o.b.b ENSGT00940000154931.d.o.b.a.a ENSGT00940000154519.g.b.a.a.a.b.a ENSGT00940000154519.g.b.a.a.b.a ENSGT00940000154519.g.b.a.a.a.a ENSGT00940000154519.g.b.b ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105.q.b ENSGT00940000155105.q.a ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a Mus_C ANCESTRAL SPECIES 10 ENSGT00940000154931.d.p ENSGT00940000154931.d.o.b.b ENSGT00940000154931.d.o.b.a.b ENSGT00940000154931.d.o.b.a.a ENSGT00940000154519.g.b.a.a.a.b.a ENSGT00940000154519.g.b.a.a.b.a ENSGT00940000154519.g.b.a.a.a.a ENSGT00940000154519.g.b.b ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105.q.b ENSGT00940000155105.q.a ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a spretus MODERN SPECIES 4 MGP_SPRETEiJ_G0019283 MGP_SPRETEiJ_G0019284 Serpinb6d (MGP_SPRETEiJ_G0019285) MGP_SPRETEiJ_G0019286 Serpinb6c (MGP_SPRETEiJ_G0019287) Serpinb6a (MGP_SPRETEiJ_G0019288) Nqo2 (MGP_SPRETEiJ_G0019289) Ripk1 (MGP_SPRETEiJ_G0019290) Bphl (MGP_SPRETEiJ_G0019291) MGP_SPRETEiJ_G0019292 MGP_SPRETEiJ_G0019293 MGP_SPRETEiJ_G0019294 Psmg4 (MGP_SPRETEiJ_G0019295) Slc22a23 (MGP_SPRETEiJ_G0019296) Pxdc1 (MGP_SPRETEiJ_G0019297) Fam50b (MGP_SPRETEiJ_G0019298) ##22 Prpf4b (MGP_SPRETEiJ_G0019299) MGP_SPRETEiJ_G0019300 Tex56 (MGP_SPRETEiJ_G0019301) MGP_SPRETEiJ_G0019302 MGP_SPRETEiJ_G0019303 MGP_SPRETEiJ_G0019304 MGP_SPRETEiJ_G0019305 MGP_SPRETEiJ_G0019306 MGP_SPRETEiJ_G0019307 Cdyl (MGP_SPRETEiJ_G0019308) Rpp40 (MGP_SPRETEiJ_G0019309) Ppp1r3g (MGP_SPRETEiJ_G0019310) Lyrm4 (MGP_SPRETEiJ_G0019311) Fars2 (MGP_SPRETEiJ_G0019312) Nrn1 (MGP_SPRETEiJ_G0019313) Steppe mouse MODERN SPECIES 2975 Serpinb6d (ENSMSIG00000003590) Serpinb6e (ENSMSIG00000003547) Serpinb6c (ENSMSIG00000003508) Serpinb6a (ENSMSIG00000003400) Nqo2 (ENSMSIG00000003346) Ripk1 (ENSMSIG00000003307) Bphl (ENSMSIG00000003262) Tubb2a (ENSMSIG00000003218) Psmg4 (ENSMSIG00000003186) Slc22a23 (ENSMSIG00000003104) Pxdc1 (ENSMSIG00000003089) Fam50b (ENSMSIG00000003082) ##22 ENSMSIG00000003077 Prpf4b (ENSMSIG00000003035) Fam217a (ENSMSIG00000002942) Tex56 (ENSMSIG00000002912) ENSMSIG00000002713 Mouse MODERN SPECIES 4 Serpinb9f (ENSMUSG00000038327) Serpinb9h (ENSMUSG00000071452) Serpinb9g (ENSMUSG00000057726) Serpinb6d (ENSMUSG00000047889) Serpinb6e (ENSMUSG00000069248) Serpinb6c (ENSMUSG00000052180) Serpinb6a (ENSMUSG00000060147) Nqo2 (ENSMUSG00000046949) Ripk1 (ENSMUSG00000021408) Bphl (ENSMUSG00000038286) Tubb2a (ENSMUSG00000058672) Tubb2b (ENSMUSG00000045136) Psmg4 (ENSMUSG00000071451) Slc22a23 (ENSMUSG00000038267) Pxdc1 (ENSMUSG00000021411) Fam50b (ENSMUSG00000038246) ##22 Prpf4b (ENSMUSG00000021413) Fam217a (ENSMUSG00000021414) Tex56 (ENSMUSG00000021415) Eci3 (ENSMUSG00000021416) Eci2 (ENSMUSG00000021417) Cdyl (ENSMUSG00000059288) Rpp40 (ENSMUSG00000021418) Ppp1r3g (ENSMUSG00000050423) Lyrm4 (ENSMUSG00000046573) Fars2 (ENSMUSG00000021420) Nrn1 (ENSMUSG00000039114) F13a1 (ENSMUSG00000039109) Ly86 (ENSMUSG00000021423) Rreb1 (ENSMUSG00000039087) Ssr1 (ENSMUSG00000021427) Ryukyu mouse MODERN SPECIES 4 Serpinb6b (MGP_CAROLIEiJ_G0018407) Serpinb9 (MGP_CAROLIEiJ_G0018408) MGP_CAROLIEiJ_G0018409 MGP_CAROLIEiJ_G0018410 MGP_CAROLIEiJ_G0018411 MGP_CAROLIEiJ_G0018412 Serpinb6c (MGP_CAROLIEiJ_G0018413) Serpinb6a (MGP_CAROLIEiJ_G0018414) Nqo2 (MGP_CAROLIEiJ_G0018415) Ripk1 (MGP_CAROLIEiJ_G0018416) Bphl (MGP_CAROLIEiJ_G0018417) MGP_CAROLIEiJ_G0018418 Psmg4 (MGP_CAROLIEiJ_G0018419) Slc22a23 (MGP_CAROLIEiJ_G0018420) Pxdc1 (MGP_CAROLIEiJ_G0018421) Fam50b (MGP_CAROLIEiJ_G0018422) ##22 Prpf4b (MGP_CAROLIEiJ_G0018423) MGP_CAROLIEiJ_G0018424 Tex56 (MGP_CAROLIEiJ_G0018425) Eci3 (MGP_CAROLIEiJ_G0018426) Eci2 (MGP_CAROLIEiJ_G0018427) Cdyl (MGP_CAROLIEiJ_G0018428) Rpp40 (MGP_CAROLIEiJ_G0018429) Ppp1r3g (MGP_CAROLIEiJ_G0018430) Lyrm4 (MGP_CAROLIEiJ_G0018431) Fars2 (MGP_CAROLIEiJ_G0018432) Nrn1 (MGP_CAROLIEiJ_G0018433) F13a1 (MGP_CAROLIEiJ_G0018434) Ly86 (MGP_CAROLIEiJ_G0018435) Rreb1 (MGP_CAROLIEiJ_G0018436) Ssr1 (MGP_CAROLIEiJ_G0018437) Shrew mouse MODERN SPECIES 7 MGP_PahariEiJ_G0019475 MGP_PahariEiJ_G0019476 MGP_PahariEiJ_G0019477 Serpinb6d (MGP_PahariEiJ_G0019478) Serpinb6e (MGP_PahariEiJ_G0019479) Serpinb6c (MGP_PahariEiJ_G0019480) Serpinb6a (MGP_PahariEiJ_G0019481) Nqo2 (MGP_PahariEiJ_G0019482) Ripk1 (MGP_PahariEiJ_G0019483) Bphl (MGP_PahariEiJ_G0019484) MGP_PahariEiJ_G0019485 Tubb2b (MGP_PahariEiJ_G0019486) Psmg4 (MGP_PahariEiJ_G0019487) Slc22a23 (MGP_PahariEiJ_G0019488) Pxdc1 (MGP_PahariEiJ_G0019489) Fam50b (MGP_PahariEiJ_G0019490) ##22 Prpf4b (MGP_PahariEiJ_G0019491) MGP_PahariEiJ_G0019492 Tex56 (MGP_PahariEiJ_G0019493) Eci3 (MGP_PahariEiJ_G0019494) Eci2 (MGP_PahariEiJ_G0019495) Cdyl (MGP_PahariEiJ_G0019496) Rpp40 (MGP_PahariEiJ_G0019497) Ppp1r3g (MGP_PahariEiJ_G0019498) Lyrm4 (MGP_PahariEiJ_G0019499) Fars2 (MGP_PahariEiJ_G0019500) Nrn1 (MGP_PahariEiJ_G0019501) F13a1 (MGP_PahariEiJ_G0019502) Ly86 (MGP_PahariEiJ_G0019503) Rreb1 (MGP_PahariEiJ_G0019504) Ssr1 (MGP_PahariEiJ_G0019505) Rat MODERN SPECIES 8 Serpinb9 (ENSRNOG00000033772) RGD1562844 (ENSRNOG00000048576) Serpinb1b (ENSRNOG00000034229) Serpinb9d (ENSRNOG00000022139) Serpinb6e (ENSRNOG00000070025) RGD1564786 (ENSRNOG00000063990) Nqo2 (ENSRNOG00000017820) Serpinb6a (ENSRNOG00000017962) Ripk1 (ENSRNOG00000017787) Bphl (ENSRNOG00000017577) Tubb2b (ENSRNOG00000017445) Tubb2a (ENSRNOG00000017558) Psmg4 (ENSRNOG00000039265) Slc22a23 (ENSRNOG00000017210) Pxdc1 (ENSRNOG00000017093) Fam50b (ENSRNOG00000017083) ##22 Prpf4b (ENSRNOG00000016705) Fam217a (ENSRNOG00000016672) Tex56p (ENSRNOG00000033763) Eci3 (ENSRNOG00000029549) Eci2 (ENSRNOG00000066714) Cdyl (ENSRNOG00000032215) Rpp40 (ENSRNOG00000016226) Ppp1r3g (ENSRNOG00000016222) Lyrm4 (ENSRNOG00000047970) Fars2 (ENSRNOG00000016135) Nrn1 (ENSRNOG00000050767) F13a1 (ENSRNOG00000015957) Ly86 (ENSRNOG00000000137) RGD1563601 (ENSRNOG00000031706) Rreb1 (ENSRNOG00000015701) Cricetidae ANCESTRAL SPECIES 22 ENSGT00390000008538 ENSGT01000000215059 ENSGT00940000154573 ENSGT00940000154931.d ENSGT00940000154519.g.b.a.c.b ENSGT00940000154519.g.b.a.d ENSGT00940000154519.g.b.a.c.a ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000175246 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00940000155105.q ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 ENSGT00940000157075 Cricetidae_B ANCESTRAL SPECIES 22 ENSGT00940000156211.b ENSGT00390000008538 ENSGT01000000215059 ENSGT00940000154573 ENSGT00940000154931.d ENSGT00940000154519.g.b.a.d ENSGT00940000154519.g.b.a.c.a ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000175246 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105.r ENSGT00940000155105.q ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a Northern American deer mouse MODERN SPECIES 18 ENSPEMG00000007226 ENSPEMG00000007216 ENSPEMG00000025946 ENSPEMG00000029739 ENSPEMG00000011189 ENSPEMG00000006842 ENSPEMG00000030940 Nqo2 (ENSPEMG00000022103) Ripk1 (ENSPEMG00000014892) Bphl (ENSPEMG00000020657) ENSPEMG00000028800 Tubb2b (ENSPEMG00000008538) Psmg4 (ENSPEMG00000020434) Slc22a23 (ENSPEMG00000020810) Pxdc1 (ENSPEMG00000021893) Fam50b (ENSPEMG00000024324) ##22 ENSPEMG00000031049 Prpf4b (ENSPEMG00000020358) Fam217a (ENSPEMG00000020354) Tex56 (ENSPEMG00000020583) ENSPEMG00000021161 ENSPEMG00000021110 Cdyl (ENSPEMG00000022690) Rpp40 (ENSPEMG00000020809) Ppp1r3g (ENSPEMG00000014441) Lyrm4 (ENSPEMG00000030913) Fars2 (ENSPEMG00000017477) ENSPEMG00000028708 ENSPEMG00000029972 ENSPEMG00000027489 Nrn1 (ENSPEMG00000010532) Prairie vole MODERN SPECIES 3 ENSMOCG00000016281 ENSMOCG00000010614 ENSMOCG00000004352 ENSMOCG00000011182 ENSMOCG00000019022 ENSMOCG00000016676 ENSMOCG00000000484 Nqo2 (ENSMOCG00000007454) Ripk1 (ENSMOCG00000002677) Bphl (ENSMOCG00000012434) Tubb2a (ENSMOCG00000021775) Tubb2b (ENSMOCG00000021829) Psmg4 (ENSMOCG00000020506) Slc22a23 (ENSMOCG00000009539) Pxdc1 (ENSMOCG00000020484) Fam50b (ENSMOCG00000009994) ##22 Prpf4b (ENSMOCG00000022394) Fam217a (ENSMOCG00000021508) Tex56 (ENSMOCG00000011556) ENSMOCG00000006528 ENSMOCG00000009658 Cdyl (ENSMOCG00000012115) Rpp40 (ENSMOCG00000000305) Ppp1r3g (ENSMOCG00000005122) Lyrm4 (ENSMOCG00000015484) Fars2 (ENSMOCG00000021203) Nrn1 (ENSMOCG00000015236) F13a1 (ENSMOCG00000018301) ENSMOCG00000003554 Ly86 (ENSMOCG00000015534) ENSMOCG00000014284 Cricetinae ANCESTRAL SPECIES 20 ENSGT00940000156211.b ENSGT00390000008538 ENSGT01000000215059 ENSGT00940000154573 ENSGT00940000154931.d.j ENSGT00940000154519.g.b.a.c.b ENSGT00940000154931.d.i ENSGT00940000154519.g.b.a.c.a ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00940000155105.q ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 ENSGT00940000157075 Chinese hamster chok1gshd MODERN SPECIES 317 ENSCGRG00001000139 ENSCGRG00001009851 ENSCGRG00001014514 ENSCGRG00001021359 ENSCGRG00001022043 ENSCGRG00001020665 ENSCGRG00001015437 Nqo2 (ENSCGRG00001004425) Ripk1 (ENSCGRG00001014419) Bphl (ENSCGRG00001014124) Tubb2a (ENSCGRG00001020515) Tubb2b (ENSCGRG00001008382) Psmg4 (ENSCGRG00001017753) Slc22a23 (ENSCGRG00001010789) Pxdc1 (ENSCGRG00001021838) Fam50b (ENSCGRG00001009274) ##22 Prpf4b (ENSCGRG00001019388) Fam217a (ENSCGRG00001020164) ENSCGRG00001021795 Cdyl (ENSCGRG00001002703) ENSCGRG00001013878 Rpp40 (ENSCGRG00001018328) Ppp1r3g (ENSCGRG00001001814) Lyrm4 (ENSCGRG00001020406) Fars2 (ENSCGRG00001022626) ENSCGRG00001012890 Nrn1 (ENSCGRG00001017665) F13a1 (ENSCGRG00001021633) Ly86 (ENSCGRG00001014143) Rreb1 (ENSCGRG00001019036) Ssr1 (ENSCGRG00001024823) Golden Hamster MODERN SPECIES 623 Wrnip1 (ENSMAUG00000009914) ENSMAUG00000009659 ENSMAUG00000009345 ENSMAUG00000009098 ENSMAUG00000008075 ENSMAUG00000001439 ENSMAUG00000001093 Nqo2 (ENSMAUG00000000875) Ripk1 (ENSMAUG00000000557) Bphl (ENSMAUG00000000408) Tubb2a (ENSMAUG00000018540) ENSMAUG00000018054 Psmg4 (ENSMAUG00000017755) Slc22a23 (ENSMAUG00000017453) Pxdc1 (ENSMAUG00000016900) Fam50b (ENSMAUG00000001407) ##22 ENSMAUG00000015060 Prpf4b (ENSMAUG00000007805) Fam217a (ENSMAUG00000004346) Tex56 (ENSMAUG00000002707) ENSMAUG00000001515 ENSMAUG00000020164 Cdyl (ENSMAUG00000011510) Rpp40 (ENSMAUG00000010268) Lyrm4 (ENSMAUG00000009051) Fars2 (ENSMAUG00000008493) Nrn1 (ENSMAUG00000008121) F13a1 (ENSMAUG00000003924) Ly86 (ENSMAUG00000002933) ENSMAUG00000002202 Ssr1 (ENSMAUG00000001251) Upper Galilee mountains blind mole rat MODERN SPECIES 764 Ripk1 (ENSNGAG00000010576) Bphl (ENSNGAG00000024371) Tubb2a (ENSNGAG00000020746) Tubb2b (ENSNGAG00000021437) Psmg4 (ENSNGAG00000016957) Slc22a23 (ENSNGAG00000021185) Pxdc1 (ENSNGAG00000004640) Fam50b (ENSNGAG00000024017) ##22 ENSNGAG00000009942 Prpf4b (ENSNGAG00000023322) ENSNGAG00000020575 Cdyl (ENSNGAG00000023764) ENSNGAG00000023955 Lyrm4 (ENSNGAG00000024207) Fars2 (ENSNGAG00000021589) Nrn1 (ENSNGAG00000018954) F13a1 (ENSNGAG00000022897) Ly86 (ENSNGAG00000011116) Rreb1 (ENSNGAG00000021506) Ssr1 (ENSNGAG00000021960) Cage1 (ENSNGAG00000021871) Riok1 (ENSNGAG00000021734) Dsp (ENSNGAG00000020849) Rodentia_A DUPLICATION Rodentia_A ANCESTRAL SPECIES ENSGT00390000004735.B.a ##22 Hystricomorpha DUPLICATION Hystricomorpha ANCESTRAL SPECIES 54 ENSGT00550000074803 #10 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.B.a.a ##22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT01050000244815.B.a.a ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647.d ENSGT00390000006885.a Naked mole-rat female MODERN SPECIES 31 L1CAM (ENSHGLG00000003403) #7 AVPR2 (ENSHGLG00000006784) #8 ARHGAP4 (ENSHGLG00000000857) #9 NAA10 (ENSHGLG00000002773) #10 RENBP (ENSHGLG00000009835) HCFC1 (ENSHGLG00000001143) #11 IRAK1 (ENSHGLG00000002116) #12 MECP2 (ENSHGLG00000000899) #13 ENSHGLG00000043472 #15 TKTL1 (ENSHGLG00000042978) RPL10 (ENSHGLG00000002349) ##17 DNASE1L1 (ENSHGLG00000013868) #18 ENSHGLG00000009984 #19 ATP6AP1 (ENSHGLG00000002607) #20 GDI1 (ENSHGLG00000003275) #21 ENSHGLG00000039319 ##22 PLXNA3 (ENSHGLG00000002186) #23 LAGE3 (ENSHGLG00000039993) #24 ENSHGLG00000003702 #25 FAM3A (ENSHGLG00000005912) #27 G6PD (ENSHGLG00000001124) #28 ENSHGLG00000032904 #29 Hystricomorpha_a ANCESTRAL SPECIES 61 ENSGT00550000074803 #10 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.B.a.a ##22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT01050000244815.B.a.a ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647.d ENSGT00390000006885.a Hystricomorpha_b ANCESTRAL SPECIES 84 ENSGT00950000182824.a.b.b #9 ENSGT00550000074803 #10 ENSGT00390000013740 ENSGT00940000161383 #11 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162426 ENSGT00940000153588.b ENSGT00390000002034 #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.B.a.a ##22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 Long-tailed chinchilla MODERN SPECIES 287 ENSCLAG00000001334 #9 NAA10 (ENSCLAG00000001427) #10 RENBP (ENSCLAG00000003810) HCFC1 (ENSCLAG00000004175) #11 IRAK1 (ENSCLAG00000006192) #12 MECP2 (ENSCLAG00000001648) #13 ENSCLAG00000001715 #14 TKTL1 (ENSCLAG00000001825) EMD (ENSCLAG00000002874) #16 FLNA (ENSCLAG00000003106) ENSCLAG00000003108 ##17 DNASE1L1 (ENSCLAG00000003494) #18 TAFAZZIN (ENSCLAG00000010970) #19 ATP6AP1 (ENSCLAG00000002132) #20 GDI1 (ENSCLAG00000002425) #21 ENSCLAG00000002733 ##22 PLXNA3 (ENSCLAG00000001910) #23 LAGE3 (ENSCLAG00000002127) #24 UBL4A (ENSCLAG00000002161) #25 SLC10A3 (ENSCLAG00000002307) #26 FAM3A (ENSCLAG00000002528) #27 G6PD (ENSCLAG00000003284) #28 IKBKG (ENSCLAG00000003721) #29 ENSCLAG00000017457 ENSCLAG00000017603 Degu MODERN SPECIES 259 RENBP (ENSODEG00000005065) HCFC1 (ENSODEG00000004823) #11 IRAK1 (ENSODEG00000004583) #12 MECP2 (ENSODEG00000004523) #13 ENSODEG00000004516 ENSODEG00000004473 #14 ENSODEG00000004454 TKTL1 (ENSODEG00000004431) FLNA (ENSODEG00000004055) EMD (ENSODEG00000003890) #16 ENSODEG00000003868 #17 DNASE1L1 (ENSODEG00000003830) #18 TAFAZZIN (ENSODEG00000003758) #19 ATP6AP1 (ENSODEG00000003643) #20 GDI1 (ENSODEG00000006550) #21 ENSODEG00000006510 ##22 PLXNA3 (ENSODEG00000006368) #23 ENSODEG00000006315 #24 UBL4A (ENSODEG00000006287) #25 FAM3A (ENSODEG00000006189) #27 ENSODEG00000006077 #28 IKBKG (ENSODEG00000005911) #29 Guinea pig MODERN SPECIES 148 ENSCPOG00000026143 #9 NAA10 (ENSCPOG00000011495) #10 ENSCPOG00000024784 IRAK1 (ENSCPOG00000039151) #12 MECP2 (ENSCPOG00000012579) #13 ENSCPOG00000011198 #14 ENSCPOG00000021789 #15 TKTL1 (ENSCPOG00000011767) FLNA (ENSCPOG00000002672) EMD (ENSCPOG00000002642) #16 ENSCPOG00000002355 #17 DNASE1L1 (ENSCPOG00000005648) #18 TAFAZZIN (ENSCPOG00000020454) #19 ATP6AP1 (ENSCPOG00000005972) #20 GDI1 (ENSCPOG00000032738) #21 ENSCPOG00000005974 ##22 PLXNA3 (ENSCPOG00000011493) #23 ENSCPOG00000034445 #24 UBL4A (ENSCPOG00000040690) #25 SLC10A3 (ENSCPOG00000007289) #26 FAM3A (ENSCPOG00000019367) #27 G6PD (ENSCPOG00000021395) #28 IKBKG (ENSCPOG00000021550) #29 ENSCPOG00000026136 GAB3 (ENSCPOG00000002987) DKC1 (ENSCPOG00000008825) MPP1 (ENSCPOG00000008826) F8 (ENSCPOG00000007773) FUNDC2 (ENSCPOG00000015635) MTCP1 (ENSCPOG00000034922) CMC4 (ENSCPOG00000033896) Hystricomorpha ANCESTRAL SPECIES ENSGT00390000004735.B.a.b ##22 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00390000004735.B.a.b ##22 Hystricomorpha_b ANCESTRAL SPECIES 44 ENSGT00940000156905 ENSGT00390000001101.r ENSGT00940000154505.A ENSGT00940000157694 ENSGT00940000154474.A ENSGT00940000157874 ENSGT00940000157849 ENSGT00940000157872 ENSGT00510000049560 ENSGT00940000155360.B ENSGT00940000168071 ENSGT00940000156564 ENSGT00940000155401.h ENSGT00390000006347.b ENSGT00390000000917 ENSGT00390000004735.B.a.b ##22 ENSGT00940000161024 ENSGT00940000157234 ENSGT00940000157678 ENSGT00940000161407 ENSGT00940000158920.o ENSGT00940000157536.b ENSGT00940000158114 ENSGT00860000133881 ENSGT00940000155696 ENSGT00730000111249 ENSGT00940000155868 ENSGT00950000182808.a.a.a.a.a ##26 ENSGT00940000159229 ENSGT00940000163631 ENSGT00510000048601.b Long-tailed chinchilla MODERN SPECIES 111 CUL4A (ENSCLAG00000002629) PCID2 (ENSCLAG00000002752) PROZ (ENSCLAG00000002909) F10 (ENSCLAG00000004028) F7 (ENSCLAG00000004276) MCF2L (ENSCLAG00000002098) ATP11A (ENSCLAG00000006784) TUBGCP3 (ENSCLAG00000001848) ENSCLAG00000001914 ARHGEF7 (ENSCLAG00000002159) ENSCLAG00000015201 ANKRD10 (ENSCLAG00000009950) CARS2 (ENSCLAG00000010030) ING1 (ENSCLAG00000017685) NAXD (ENSCLAG00000008979) ENSCLAG00000010867 ##22 COL4A2 (ENSCLAG00000002637) COL4A1 (ENSCLAG00000003263) IRS2 (ENSCLAG00000003689) MYO16 (ENSCLAG00000004226) TNFSF13B (ENSCLAG00000002786) ABHD13 (ENSCLAG00000003352) LIG4 (ENSCLAG00000003376) NALF1 (ENSCLAG00000003458) ARGLU1 (ENSCLAG00000003538) EFNB2 (ENSCLAG00000003563) SLC10A2 (ENSCLAG00000002092) ##26 METTL21EP (ENSCLAG00000002141) ERCC5 (ENSCLAG00000002232) BIVM (ENSCLAG00000001814) POGLUT2 (ENSCLAG00000001918) Degu MODERN SPECIES 80 CUL4A (ENSODEG00000007751) PCID2 (ENSODEG00000007738) PROZ (ENSODEG00000009284) F10 (ENSODEG00000008696) MCF2L (ENSODEG00000009412) ATP11A (ENSODEG00000008675) ENSODEG00000008533 TUBGCP3 (ENSODEG00000008609) ENSODEG00000019619 ENSODEG00000009444 ARHGEF7 (ENSODEG00000009477) ENSODEG00000008348 ING1 (ENSODEG00000008422) CARS2 (ENSODEG00000008933) NAXD (ENSODEG00000008623) ENSODEG00000019961 ##22 RAB20 (ENSODEG00000010199) COL4A2 (ENSODEG00000012107) COL4A1 (ENSODEG00000011076) IRS2 (ENSODEG00000009721) MYO16 (ENSODEG00000008856) TNFSF13B (ENSODEG00000010925) ABHD13 (ENSODEG00000019588) LIG4 (ENSODEG00000019683) ENSODEG00000008996 NALF1 (ENSODEG00000009813) ARGLU1 (ENSODEG00000009389) EFNB2 (ENSODEG00000010207) SLC10A2 (ENSODEG00000009576) ##26 METTL21EP (ENSODEG00000012296) ENSODEG00000009687 Rodentia_A ANCESTRAL SPECIES 26 ENSGT00440000033640 ENSGT00940000156211.b ENSGT01000000215059 ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931.d ENSGT00940000154931.c.a.b ENSGT00940000154519.g.b ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B.b ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 Sciuridae ANCESTRAL SPECIES 1 ENSGT00390000012138.a.b.t.ab ENSGT00940000156211.b ENSGT01000000215059 ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931.d ENSGT00940000154931.c.a.b ENSGT00940000154519.g.b ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B.b ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 Marmotini ANCESTRAL SPECIES 40 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.hd ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B.b ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 Marmotini_b ANCESTRAL SPECIES 68 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.hd ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000015826.x ENSGT00390000009209 ENSGT00390000004735.B.b ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 Squirrel MODERN SPECIES 134 RIPK1 (ENSSTOG00000001542) BPHL (ENSSTOG00000001554) TUBB2A (ENSSTOG00000024688) TUBB2B (ENSSTOG00000022186) PSMG4 (ENSSTOG00000020187) SLC22A23 (ENSSTOG00000031179) ENSSTOG00000030156 PXDC1 (ENSSTOG00000027169) FAM50B (ENSSTOG00000026905) ##22 PRPF4B (ENSSTOG00000004256) FAM217A (ENSSTOG00000030768) ENSSTOG00000030065 ECI2 (ENSSTOG00000004305) CDYL (ENSSTOG00000011187) RPP40 (ENSSTOG00000011199) PPP1R3G (ENSSTOG00000021636) LYRM4 (ENSSTOG00000026736) FARS2 (ENSSTOG00000012156) ENSSTOG00000024647 F13A1 (ENSSTOG00000003326) LY86 (ENSSTOG00000015443) RREB1 (ENSSTOG00000020497) ENSSTOG00000022608 CAGE1 (ENSSTOG00000009267) Arctic ground squirrel MODERN SPECIES 350 RIPK1 (ENSUPAG00010010546) BPHL (ENSUPAG00010010568) ENSUPAG00010010577 TUBB2B (ENSUPAG00010010579) ENSUPAG00010010587 PSMG4 (ENSUPAG00010010591) SLC22A23 (ENSUPAG00010010597) ENSUPAG00010010614 PXDC1 (ENSUPAG00010010623) FAM50B (ENSUPAG00010010626) ##22 PRPF4B (ENSUPAG00010010629) FAM217A (ENSUPAG00010010641) ENSUPAG00010010661 ECI2 (ENSUPAG00010010667) CDYL (ENSUPAG00010010685) ENSUPAG00010010692 RPP40 (ENSUPAG00010010701) PPP1R3G (ENSUPAG00010010716) Alpin marmot MODERN SPECIES 36 RIPK1 (ENSMMMG00000014179) BPHL (ENSMMMG00000014194) TUBB2B (ENSMMMG00000014205) SLC22A23 (ENSMMMG00000014224) ENSMMMG00000014241 ENSMMMG00000014254 FAM50B (ENSMMMG00000014258) ##22 PRPF4B (ENSMMMG00000014263) FAM217A (ENSMMMG00000014281) ENSMMMG00000014296 ECI2 (ENSMMMG00000014301) CDYL (ENSMMMG00000014357) RPP40 (ENSMMMG00000014521) PPP1R3G (ENSMMMG00000014548) LYRM4 (ENSMMMG00000014551) FARS2 (ENSMMMG00000014567) NRN1 (ENSMMMG00000014586) F13A1 (ENSMMMG00000014594) LY86 (ENSMMMG00000014644) RREB1 (ENSMMMG00000014665) SSR1 (ENSMMMG00000014761) CAGE1 (ENSMMMG00000014786) Eurasian red squirrel MODERN SPECIES 16 ENSSVLG00005006323 WRNIP1 (ENSSVLG00005006348) SERPINB1 (ENSSVLG00005006417) ENSSVLG00005006449 ENSSVLG00005006719 ENSSVLG00005007366 SERPINB6 (ENSSVLG00005007395) NQO2 (ENSSVLG00005007475) RIPK1 (ENSSVLG00005007529) ENSSVLG00005007569 TUBB2A (ENSSVLG00005007615) TUBB2B (ENSSVLG00005007652) PSMG4 (ENSSVLG00005007683) SLC22A23 (ENSSVLG00005007747) PXDC1 (ENSSVLG00005007821) FAM50B (ENSSVLG00005007859) ##22 PRPF4B (ENSSVLG00005007879) ENSSVLG00005007911 ENSSVLG00005007999 ECI2 (ENSSVLG00005008033) CDYL (ENSSVLG00005008158) RPP40 (ENSSVLG00005008216) PPP1R3G (ENSSVLG00005008297) LYRM4 (ENSSVLG00005008312) ENSSVLG00005008346 FARS2 (ENSSVLG00005008373) NRN1 (ENSSVLG00005008393) F13A1 (ENSSVLG00005008423) LY86 (ENSSVLG00005008500) RREB1 (ENSSVLG00005008541) SSR1 (ENSSVLG00005008603) Hystricomorpha ANCESTRAL SPECIES 42 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT01000000215059 ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931.d ENSGT00940000154519.g.b ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B.b ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 Hystricomorpha_a ANCESTRAL SPECIES 48 ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931.d ENSGT00940000154519.g.b ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B.b ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 Guinea pig MODERN SPECIES 38 ENSCPOG00000030607 ENSCPOG00000021276 ENSCPOG00000037377 ENSCPOG00000040114 ENSCPOG00000024499 SERPINB6 (ENSCPOG00000008254) NQO2 (ENSCPOG00000033205) RIPK1 (ENSCPOG00000005195) BPHL (ENSCPOG00000036729) TUBB2B (ENSCPOG00000039814) PSMG4 (ENSCPOG00000026747) SLC22A23 (ENSCPOG00000010470) PXDC1 (ENSCPOG00000038768) FAM50B (ENSCPOG00000000148) ##22 PRPF4B (ENSCPOG00000004775) ECI2 (ENSCPOG00000004788) CDYL (ENSCPOG00000005847) RPP40 (ENSCPOG00000005855) LYRM4 (ENSCPOG00000038899) FARS2 (ENSCPOG00000003994) NRN1 (ENSCPOG00000021547) F13A1 (ENSCPOG00000005276) LY86 (ENSCPOG00000012001) RREB1 (ENSCPOG00000014380) SSR1 (ENSCPOG00000039953) CAGE1 (ENSCPOG00000009875) ENSCPOG00000036973 RIOK1 (ENSCPOG00000009882) DSP (ENSCPOG00000007895) Naked mole-rat female MODERN SPECIES 28 ENSHGLG00000033368 ENSHGLG00000014288 ENSHGLG00000040911 WRNIP1 (ENSHGLG00000014216) SERPINB1 (ENSHGLG00000032738) ENSHGLG00000017487 SERPINB6 (ENSHGLG00000015274) ENSHGLG00000045779 RIPK1 (ENSHGLG00000008330) BPHL (ENSHGLG00000008018) ENSHGLG00000043950 TUBB2B (ENSHGLG00000007696) ENSHGLG00000007366 SLC22A23 (ENSHGLG00000007033) PXDC1 (ENSHGLG00000006650) FAM50B (ENSHGLG00000006289) ##22 PRPF4B (ENSHGLG00000005945) ECI2 (ENSHGLG00000005614) ENSHGLG00000038867 ENSHGLG00000005262 RPP40 (ENSHGLG00000004871) ENSHGLG00000040678 PPP1R3G (ENSHGLG00000041006) ENSHGLG00000038262 ENSHGLG00000004389 ENSHGLG00000020343 ENSHGLG00000036093 ENSHGLG00000049115 ENSHGLG00000035907 ENSHGLG00000035488 ENSHGLG00000034596 Lagomorpha ANCESTRAL SPECIES 58 ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519.g.b ENSGT00940000154519.h ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 ENSGT00940000157075 Pika MODERN SPECIES 8107 FAM50B (ENSOPRG00000007447) ##22 Rabbit MODERN SPECIES 448 GMDS (ENSOCUG00000015142) ENSOCUG00000005076 WRNIP1 (ENSOCUG00000005081) ENSOCUG00000005088 SERPINB9 (ENSOCUG00000005091) ENSOCUG00000006216 NQO2 (ENSOCUG00000016499) RIPK1 (ENSOCUG00000011791) BPHL (ENSOCUG00000009825) TUBB2B (ENSOCUG00000009827) ENSOCUG00000010464 SLC22A23 (ENSOCUG00000010469) PXDC1 (ENSOCUG00000021247) FAM50B (ENSOCUG00000003308) ##22 PRPF4B (ENSOCUG00000000425) FAM217A (ENSOCUG00000016142) ENSOCUG00000016148 ENSOCUG00000016155 ENSOCUG00000032771 ENSOCUG00000030173 RPP40 (ENSOCUG00000000354) CDYL (ENSOCUG00000004407) LYRM4 (ENSOCUG00000023362) FARS2 (ENSOCUG00000014165) NRN1 (ENSOCUG00000008677) ENSOCUG00000011452 Primates ANCESTRAL SPECIES 5 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00910000147105 ENSGT00940000156211.b ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519.g.b ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 Strepsirrhini ANCESTRAL SPECIES 29 ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519.g.b ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT01000000214902 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a Lemuriformes ANCESTRAL SPECIES 63 ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519.g.b ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 ENSGT00940000157075 Lemuriformes_a ANCESTRAL SPECIES 166 ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519.g.b ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000168960 ENSGT00940000155105 ENSGT00940000154543.b ENSGT00390000008360 Greater bamboo lemur MODERN SPECIES 610 ENSPSMG00000021152 PSMG4 (ENSPSMG00000021142) SLC22A23 (ENSPSMG00000021123) PXDC1 (ENSPSMG00000021073) FAM50B (ENSPSMG00000021061) ##22 PRPF4B (ENSPSMG00000021046) FAM217A (ENSPSMG00000021011) ENSPSMG00000020994 ECI2 (ENSPSMG00000020985) ENSPSMG00000020920 Bushbaby MODERN SPECIES 141 ENSOGAG00000002491 SERPINB9 (ENSOGAG00000029897) SERPINB6 (ENSOGAG00000028420) NQO2 (ENSOGAG00000029985) RIPK1 (ENSOGAG00000007491) BPHL (ENSOGAG00000007494) ENSOGAG00000007496 TUBB2B (ENSOGAG00000032955) ENSOGAG00000027336 SLC22A23 (ENSOGAG00000003183) PXDC1 (ENSOGAG00000016490) FAM50B (ENSOGAG00000016493) ##22 PRPF4B (ENSOGAG00000033081) FAM217A (ENSOGAG00000011629) ENSOGAG00000011631 ECI2 (ENSOGAG00000011635) ENSOGAG00000015920 RPP40 (ENSOGAG00000006055) PPP1R3G (ENSOGAG00000034237) ENSOGAG00000015193 FARS2 (ENSOGAG00000001040) NRN1 (ENSOGAG00000027827) F13A1 (ENSOGAG00000001042) LY86 (ENSOGAG00000001044) RREB1 (ENSOGAG00000025755) SSR1 (ENSOGAG00000014234) CAGE1 (ENSOGAG00000014237) Haplorrhini ANCESTRAL SPECIES 2 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00910000147105 ENSGT00940000156211.b ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519.g.b ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 Simiiformes ANCESTRAL SPECIES 5 ENSGT00440000033640 ENSGT00910000147105 ENSGT00940000156211.b ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519.g.b ENSGT00940000156563 ENSGT00390000006707.w.b ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 Platyrrhini ANCESTRAL SPECIES 34 ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519.g.b ENSGT00940000156563 ENSGT00390000006707.w.b ENSGT00940000159347 ENSGT00390000004746.c.a ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209.e.a ENSGT00390000009209.f ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a.a.a ENSGT00940000157289.a.a.b ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a Cebidae ANCESTRAL SPECIES 33 ENSGT00940000154953 ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519.g.b ENSGT00940000156563 ENSGT00390000006707.w.b ENSGT00940000159347 ENSGT00390000004746.c.a ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209.e.a ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a.a.a ENSGT00940000157289.a.a.b ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a Cebidae_a ANCESTRAL SPECIES 186 ENSGT00390000009209.f ENSGT00390000004735.B ##22 Bolivian squirrel monkey MODERN SPECIES 64 EXOC2 (ENSSBOG00000023371) FOXF2 (ENSSBOG00000030093) GMDS (ENSSBOG00000023900) MYLK4 (ENSSBOG00000026264) WRNIP1 (ENSSBOG00000025057) SERPINB1 (ENSSBOG00000024614) SERPINB9 (ENSSBOG00000028507) SERPINB6 (ENSSBOG00000019279) NQO2 (ENSSBOG00000028797) RIPK1 (ENSSBOG00000029217) ENSSBOG00000032695 TUBB2A (ENSSBOG00000023452) ENSSBOG00000033676 SLC22A23 (ENSSBOG00000026574) PXDC1 (ENSSBOG00000000499) FAM50B (ENSSBOG00000036113) ##22 ENSSBOG00000013265 PRPF4B (ENSSBOG00000014617) FAM217A (ENSSBOG00000029826) ENSSBOG00000022307 ECI2 (ENSSBOG00000021463) CDYL (ENSSBOG00000034197) RPP40 (ENSSBOG00000020297) ENSSBOG00000029411 ENSSBOG00000033795 FARS2 (ENSSBOG00000025432) NRN1 (ENSSBOG00000016661) F13A1 (ENSSBOG00000033902) LY86 (ENSSBOG00000023968) RREB1 (ENSSBOG00000025257) SSR1 (ENSSBOG00000018080) Marmoset MODERN SPECIES 16 ENSCJAG00000072237 ENSCJAG00000066289 ENSCJAG00000070049 ENSCJAG00000085203 ENSCJAG00000052093 ENSCJAG00000073772 ENSCJAG00000086827 ENSCJAG00000070954 NQO2 (ENSCJAG00000017717) RIPK1 (ENSCJAG00000017707) ENSCJAG00000017700 TUBB2B (ENSCJAG00000045954) ENSCJAG00000017623 SLC22A23 (ENSCJAG00000017606) PXDC1 (ENSCJAG00000017603) FAM50B (ENSCJAG00000017601) ##22 PRPF4B (ENSCJAG00000021385) FAM217A (ENSCJAG00000021382) ENSCJAG00000040689 ECI2 (ENSCJAG00000021377) CDYL (ENSCJAG00000021374) RPP40 (ENSCJAG00000021373) PPP1R3G (ENSCJAG00000021371) ENSCJAG00000069228 ENSCJAG00000021370 FARS2 (ENSCJAG00000021369) NRN1 (ENSCJAG00000084548) ENSCJAG00000055107 F13A1 (ENSCJAG00000021366) LY86 (ENSCJAG00000021363) ENSCJAG00000072565 Mas night monkey MODERN SPECIES 638 NQO2 (ENSANAG00000033860) ENSANAG00000007502 RIPK1 (ENSANAG00000033311) ENSANAG00000020303 TUBB2A (ENSANAG00000030561) TUBB2B (ENSANAG00000036086) PSMG4 (ENSANAG00000032191) SLC22A23 (ENSANAG00000023717) ENSANAG00000021015 FAM50B (ENSANAG00000031334) ##22 PRPF4B (ENSANAG00000021606) FAM217A (ENSANAG00000004744) ENSANAG00000030717 ECI2 (ENSANAG00000028772) CDYL (ENSANAG00000023827) RPP40 (ENSANAG00000029246) LYRM4 (ENSANAG00000024664) ENSANAG00000033127 FARS2 (ENSANAG00000019047) NRN1 (ENSANAG00000026127) F13A1 (ENSANAG00000035239) LY86 (ENSANAG00000032464) RREB1 (ENSANAG00000029040) ENSANAG00000020451 SSR1 (ENSANAG00000025824) Catarrhini ANCESTRAL SPECIES 5 ENSGT00440000033640 ENSGT00910000147105 ENSGT00940000156211.b ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519.g.b ENSGT00910000147563 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00910000147523 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a Cercopithecidae ANCESTRAL SPECIES 4 ENSGT00910000147105 ENSGT00940000156211.b ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519.g.b ENSGT00910000147563 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00940000154295.y.b.b ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00550000075030.n ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00910000147523 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 Cercopithecinae ANCESTRAL SPECIES 6 ENSGT00440000033640 ENSGT00910000147105 ENSGT00940000156211.b ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519.g.b ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00940000154295.y.b.b ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00550000075030.n ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00910000147523 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 Cercopithecinae_a ANCESTRAL SPECIES 6 ENSGT00910000147105 ENSGT00940000156211.b ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519.g.b ENSGT00940000156563 ENSGT00950000183029.B.c.b.b.b.u.b ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00940000154295.y.b.b ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00550000075030.n ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000154632.q.a.a.b ENSGT00940000155105 ENSGT00910000147523 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00910000147352 ENSGT00950000183142.a.b.a.b.p ENSGT00910000146968 ENSGT00940000161627.a.a.a.b.b.b.a.a.a.b.a ENSGT00940000157289.a Cercopithecinae_b ANCESTRAL SPECIES 37 ENSGT00440000033640 ENSGT00910000147105 ENSGT00940000156211.b ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519.g.b ENSGT00940000156563 ENSGT00950000183029.B.c.b.b.b.u.b ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00550000075030.n ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000154632.q.a.a.b ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00910000147352 ENSGT00950000183142.a.b.a.b.p ENSGT00910000146968 ENSGT00940000161627.a.a.a.b.b.b.a.a.a.b.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a Olive baboon MODERN SPECIES 16 FOXC1 (ENSPANG00000011156) GMDS (ENSPANG00000020544) MYLK4 (ENSPANG00000007409) WRNIP1 (ENSPANG00000044052) ENSPANG00000041893 SERPINB1 (ENSPANG00000030460) ENSPANG00000015755 NQO2 (ENSPANG00000033064) ENSPANG00000033442 ENSPANG00000038780 RIPK1 (ENSPANG00000024400) TUBB2B (ENSPANG00000047634) PSMG4 (ENSPANG00000007366) SLC22A23 (ENSPANG00000023485) ENSPANG00000037486 FAM50B (ENSPANG00000006202) ##22 ENSPANG00000039354 PRPF4B (ENSPANG00000008444) FAM217A (ENSPANG00000009605) ENSPANG00000021758 ECI2 (ENSPANG00000025189) CDYL (ENSPANG00000023577) ENSPANG00000045914 RPP40 (ENSPANG00000017865) ENSPANG00000046029 ENSPANG00000023576 FARS2 (ENSPANG00000018208) NRN1 (ENSPANG00000001032) F13A1 (ENSPANG00000017903) ENSPANG00000019551 ENSPANG00000038982 Cercopithecinae_d ANCESTRAL SPECIES 41 ENSGT00440000033640 ENSGT00910000147105 ENSGT00940000156211.b ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519.g.b ENSGT00940000156563 ENSGT00950000183029.B.c.b.b.b.u.b ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00550000075030.n ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000154632.q.a.a.b ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00910000147352 ENSGT00950000183142.a.b.a.b.p ENSGT00910000146968 ENSGT00940000161627.a.a.a.b.b.b.a.a.a.b.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a Drill MODERN SPECIES 899 ENSMLEG00000041640 MYLK4 (ENSMLEG00000043022) ENSMLEG00000011844 SERPINB1 (ENSMLEG00000031662) SERPINB9 (ENSMLEG00000028963) SERPINB6 (ENSMLEG00000013840) NQO2 (ENSMLEG00000044409) ENSMLEG00000033411 RIPK1 (ENSMLEG00000025829) BPHL (ENSMLEG00000033802) ENSMLEG00000034009 TUBB2B (ENSMLEG00000037972) PSMG4 (ENSMLEG00000035294) SLC22A23 (ENSMLEG00000029569) PXDC1 (ENSMLEG00000037642) FAM50B (ENSMLEG00000005931) ##22 ENSMLEG00000021954 PRPF4B (ENSMLEG00000030421) FAM217A (ENSMLEG00000039857) ENSMLEG00000031291 ENSMLEG00000037689 ECI2 (ENSMLEG00000033204) CDYL (ENSMLEG00000010888) RPP40 (ENSMLEG00000040851) ENSMLEG00000041575 ENSMLEG00000034332 ENSMLEG00000030282 FARS2 (ENSMLEG00000038594) NRN1 (ENSMLEG00000032113) F13A1 (ENSMLEG00000032304) LY86 (ENSMLEG00000041695) Sooty mangabey MODERN SPECIES 247 ENSCATG00000043623 GMDS (ENSCATG00000039562) ENSCATG00000033597 MYLK4 (ENSCATG00000036658) WRNIP1 (ENSCATG00000041978) SERPINB1 (ENSCATG00000039910) SERPINB6 (ENSCATG00000030479) NQO2 (ENSCATG00000027170) ENSCATG00000021756 RIPK1 (ENSCATG00000032918) BPHL (ENSCATG00000032656) TUBB2B (ENSCATG00000017036) PSMG4 (ENSCATG00000036332) SLC22A23 (ENSCATG00000022177) PXDC1 (ENSCATG00000034625) FAM50B (ENSCATG00000019736) ##22 PRPF4B (ENSCATG00000039868) FAM217A (ENSCATG00000045004) ENSCATG00000038905 ENSCATG00000034182 ECI2 (ENSCATG00000039055) Macaca ANCESTRAL SPECIES 23 ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519.g.b ENSGT00940000156563 ENSGT00950000183029.B.c.b.b.b.u.b ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00940000154295.y.b.b ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00550000075030.n ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000154632.q.a.a.b ENSGT00940000155105 ENSGT00910000147523 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00910000147352 ENSGT00950000183142.a.b.a.b.p ENSGT00910000146968 ENSGT00940000161627.a.a.a.b.b.b.a.a.a.b.a ENSGT00940000157289.a Pig-tailed macaque MODERN SPECIES 136 MYLK4 (ENSMNEG00000033807) WRNIP1 (ENSMNEG00000032509) SERPINB1 (ENSMNEG00000031098) SERPINB9 (ENSMNEG00000018071) SERPINB6 (ENSMNEG00000038077) NQO2 (ENSMNEG00000039080) ENSMNEG00000030982 RIPK1 (ENSMNEG00000029731) BPHL (ENSMNEG00000034992) ENSMNEG00000030834 TUBB2B (ENSMNEG00000000042) PSMG4 (ENSMNEG00000045254) SLC22A23 (ENSMNEG00000035865) ENSMNEG00000040334 PXDC1 (ENSMNEG00000029513) FAM50B (ENSMNEG00000017045) ##22 ENSMNEG00000039272 PRPF4B (ENSMNEG00000036107) FAM217A (ENSMNEG00000035674) ENSMNEG00000020877 ENSMNEG00000034908 ECI2 (ENSMNEG00000000039) CDYL (ENSMNEG00000038983) RPP40 (ENSMNEG00000041986) ENSMNEG00000003878 ENSMNEG00000045067 ENSMNEG00000041203 ENSMNEG00000042081 FARS2 (ENSMNEG00000044897) NRN1 (ENSMNEG00000041129) F13A1 (ENSMNEG00000040730) Macaca_a ANCESTRAL SPECIES 24 ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519.g.b ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00910000147523 ENSGT00940000155106 ENSGT00390000014167 ENSGT00910000147352 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a Rhesus MODERN SPECIES 14 FOXF2 (ENSMMUG00000004540) FOXC1 (ENSMMUG00000005778) GMDS (ENSMMUG00000005779) MYLK4 (ENSMMUG00000007144) WRNIP1 (ENSMMUG00000007143) SERPINB1 (ENSMMUG00000042368) SERPINB9 (ENSMMUG00000011719) SERPINB6 (ENSMMUG00000037816) NQO2 (ENSMMUG00000008487) RIPK1 (ENSMMUG00000008485) BPHL (ENSMMUG00000008483) TUBB2B (ENSMMUG00000023785) PSMG4 (ENSMMUG00000011031) SLC22A23 (ENSMMUG00000001371) PXDC1 (ENSMMUG00000010926) FAM50B (ENSMMUG00000039209) ##22 PRPF4B (ENSMMUG00000014017) FAM217A (ENSMMUG00000014019) TEX56P (ENSMMUG00000014020) ECI2 (ENSMMUG00000014021) ENSMMUG00000054791 ENSMMUG00000055619 CDYL (ENSMMUG00000004964) RPP40 (ENSMMUG00000004966) PPP1R3G (ENSMMUG00000061878) ENSMMUG00000049865 ENSMMUG00000057424 FARS2 (ENSMMUG00000016352) NRN1 (ENSMMUG00000064807) ENSMMUG00000056859 F13A1 (ENSMMUG00000001248) Vervet Monkey MODERN SPECIES 8 FOXC1 (ENSCSAG00000019112) ENSCSAG00000007184 MYLK4 (ENSCSAG00000007191) WRNIP1 (ENSCSAG00000007198) SERPINB1 (ENSCSAG00000007203) SERPINB9 (ENSCSAG00000007207) SERPINB6 (ENSCSAG00000007210) NQO2 (ENSCSAG00000007218) RIPK1 (ENSCSAG00000007224) BPHL (ENSCSAG00000007243) TUBB2A (ENSCSAG00000007247) TUBB2B (ENSCSAG00000007249) PSMG4 (ENSCSAG00000007253) SLC22A23 (ENSCSAG00000007261) PXDC1 (ENSCSAG00000007263) FAM50B (ENSCSAG00000019111) ##22 PRPF4B (ENSCSAG00000007273) FAM217A (ENSCSAG00000007279) ENSCSAG00000007286 ECI2 (ENSCSAG00000007294) CDYL (ENSCSAG00000007301) RPP40 (ENSCSAG00000007307) PPP1R3G (ENSCSAG00000019110) LYRM4 (ENSCSAG00000007314) FARS2 (ENSCSAG00000007344) NRN1 (ENSCSAG00000007350) F13A1 (ENSCSAG00000007361) LY86 (ENSCSAG00000007369) RREB1 (ENSCSAG00000007376) SSR1 (ENSCSAG00000007383) CAGE1 (ENSCSAG00000007390) Rhinopithecus ANCESTRAL SPECIES 233 ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519.g.b ENSGT00910000147563 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00940000154295.y.b.b ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00550000075030.n ENSGT00940000155562 ENSGT00940000154543.b ENSGT00940000154632.q.a.a.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 Black snub-nosed monkey MODERN SPECIES 1511 MYLK4 (ENSRBIG00000036683) WRNIP1 (ENSRBIG00000030451) SERPINB1 (ENSRBIG00000035002) SERPINB9 (ENSRBIG00000044955) SERPINB6 (ENSRBIG00000035085) ENSRBIG00000023655 NQO2 (ENSRBIG00000031353) RIPK1 (ENSRBIG00000044016) BPHL (ENSRBIG00000023282) TUBB2B (ENSRBIG00000044962) PSMG4 (ENSRBIG00000030513) SLC22A23 (ENSRBIG00000033453) ENSRBIG00000028534 PXDC1 (ENSRBIG00000034887) ENSRBIG00000030150 FAM50B (ENSRBIG00000005193) ##22 ENSRBIG00000043910 PRPF4B (ENSRBIG00000033308) FAM217A (ENSRBIG00000032885) ENSRBIG00000038999 ENSRBIG00000037967 ENSRBIG00000041293 CDYL (ENSRBIG00000041073) RPP40 (ENSRBIG00000035800) Golden snub-nosed monkey MODERN SPECIES 1264 FAM50B (ENSRROG00000000085) ##22 ENSRROG00000037914 PRPF4B (ENSRROG00000043142) FAM217A (ENSRROG00000028969) ENSRROG00000045789 ENSRROG00000032463 ECI2 (ENSRROG00000033322) CDYL (ENSRROG00000040053) RPP40 (ENSRROG00000039116) Hominoidea ANCESTRAL SPECIES 4 ENSGT00910000147105 ENSGT00940000156211.b ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519.g.b ENSGT00910000147563 ENSGT00940000156563 ENSGT00390000006707.w.b.c.a.a ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00910000147523 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000169445 ENSGT00910000146968 ENSGT00940000161627.a.a.a.b.b.b.b.b.b ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a Hominidae ANCESTRAL SPECIES 5 ENSGT00440000033640 ENSGT00910000147105 ENSGT00940000156211.b ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519.g.b ENSGT00940000156563 ENSGT00390000006707.w.b.c.a.a ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00530000063480.b.h ENSGT00550000076325 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000169445 ENSGT00910000146968 ENSGT00940000161627.a.a.a.b.b.b.b.b.b ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b Homo/Pan/Gorilla group ANCESTRAL SPECIES 4 ENSGT00440000033640 ENSGT00910000147105 ENSGT00940000156211.b ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519.g.b ENSGT00940000156563 ENSGT00390000006707.w.b.c.a.a ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00530000063480.b.h ENSGT00550000076325 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000169445 ENSGT00910000146968 ENSGT00940000161627.a.a.a.b.b.b.b.b.b ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b Homo/Pan group ANCESTRAL SPECIES 5 ENSGT00440000033640 ENSGT00910000147105 ENSGT00940000156211.b ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519.g.b ENSGT00940000156563 ENSGT00390000006707.w.b.c.a.a ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106.t ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000169445 ENSGT00910000146968 ENSGT00940000161627.a.a.a.b.b.b.b.b.b ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 Human MODERN SPECIES 18 FOXC1 (ENSG00000054598) GMDS (ENSG00000112699) MYLK4 (ENSG00000145949) WRNIP1 (ENSG00000124535) SERPINB1 (ENSG00000021355) SERPINB9 (ENSG00000170542) SERPINB6 (ENSG00000124570) NQO2 (ENSG00000124588) RIPK1 (ENSG00000137275) BPHL (ENSG00000137274) TUBB2A (ENSG00000137267) TUBB2B (ENSG00000137285) PSMG4 (ENSG00000180822) SLC22A23 (ENSG00000137266) PXDC1 (ENSG00000168994) FAM50B (ENSG00000145945) ##22 PRPF4B (ENSG00000112739) FAM217A (ENSG00000145975) ECI2 (ENSG00000198721) CDYL (ENSG00000153046) RPP40 (ENSG00000124787) PPP1R3G (ENSG00000219607) LYRM4 (ENSG00000214113) FARS2 (ENSG00000145982) NRN1 (ENSG00000124785) F13A1 (ENSG00000124491) LY86 (ENSG00000112799) RREB1 (ENSG00000124782) SSR1 (ENSG00000124783) CAGE1 (ENSG00000164304) RIOK1 (ENSG00000124784) Orangutan MODERN SPECIES 19 FOXF2 (ENSPPYG00000016166) FOXC1 (ENSPPYG00000016167) GMDS (ENSPPYG00000016168) MYLK4 (ENSPPYG00000016170) WRNIP1 (ENSPPYG00000041417) SERPINB1 (ENSPPYG00000016172) SERPINB9 (ENSPPYG00000016173) SERPINB6 (ENSPPYG00000016174) NQO2 (ENSPPYG00000016176) RIPK1 (ENSPPYG00000016178) BPHL (ENSPPYG00000016179) TUBB2B (ENSPPYG00000016180) ENSPPYG00000016181 SLC22A23 (ENSPPYG00000016182) PXDC1 (ENSPPYG00000041429) FAM50B (ENSPPYG00000016184) ##22 PRPF4B (ENSPPYG00000016187) ENSPPYG00000016188 ENSPPYG00000016189 ECI2 (ENSPPYG00000016190) ENSPPYG00000033633 CDYL (ENSPPYG00000016192) ENSPPYG00000016193 RPP40 (ENSPPYG00000016194) PPP1R3G (ENSPPYG00000040553) ENSPPYG00000030077 ENSPPYG00000039334 FARS2 (ENSPPYG00000016197) ENSPPYG00000040794 ENSPPYG00000016199 F13A1 (ENSPPYG00000016200) Laurasiatheria ANCESTRAL SPECIES 7 ENSGT01000000215059 ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.wb.b ENSGT00940000175246 ENSGT00940000154150.xb ENSGT00940000167417 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 Eulipotyphla ANCESTRAL SPECIES ENSGT00390000004735.B ##22 Hedgehog MODERN SPECIES 11086 FAM50B (ENSEEUG00000012838) ##22 Laurasiatheria_a ANCESTRAL SPECIES 7 ENSGT01000000215059 ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.wb.b ENSGT00940000175246 ENSGT00940000154150.xb ENSGT00940000167417.a ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 Laurasiatheria_b ANCESTRAL SPECIES 7 ENSGT00390000012138.a.b.t.bb.a.b ENSGT00940000156211.b ENSGT01000000215059 ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb ENSGT00940000167417.a ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 Carnivora ANCESTRAL SPECIES 4 ENSGT00390000012138.a.b.t.bb.a.b ENSGT00940000156211.b ENSGT01000000215059 ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb ENSGT00940000167417.a ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 Caniformia ANCESTRAL SPECIES 3 ENSGT00440000033640 ENSGT00390000012138.a.b.t.bb.a.b ENSGT00940000156211.b ENSGT01000000215059 ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 Caniformia_b ANCESTRAL SPECIES 31 ENSGT00440000033640 ENSGT00390000012138.a.b.t.bb.a.b ENSGT00940000156211.b ENSGT01000000215059 ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 Ursidae ANCESTRAL SPECIES 39 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT01000000215059 ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519.b ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b.x ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 Ursus ANCESTRAL SPECIES 34 ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519.b ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00390000008828 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b.x ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 American black bear MODERN SPECIES 977 FAM50B (ENSUAMG00000026107) ##22 PRPF4B (ENSUAMG00000026108) FAM217A (ENSUAMG00000026109) ENSUAMG00000026110 ECI2 (ENSUAMG00000026111) Polar bear MODERN SPECIES 181 GMDS (ENSUMAG00000018823) MYLK4 (ENSUMAG00000018791) WRNIP1 (ENSUMAG00000018782) SERPINB1 (ENSUMAG00000018779) SERPINB9 (ENSUMAG00000018772) ENSUMAG00000018764 NQO2 (ENSUMAG00000018754) RIPK1 (ENSUMAG00000018746) BPHL (ENSUMAG00000018741) ENSUMAG00000018737 ENSUMAG00000018735 ENSUMAG00000018733 PSMG4 (ENSUMAG00000018729) SLC22A23 (ENSUMAG00000018716) PXDC1 (ENSUMAG00000018711) FAM50B (ENSUMAG00000018705) ##22 PRPF4B (ENSUMAG00000018696) FAM217A (ENSUMAG00000018684) ENSUMAG00000018677 ECI2 (ENSUMAG00000018673) ENSUMAG00000018660 CDYL (ENSUMAG00000018648) RPP40 (ENSUMAG00000018639) LYRM4 (ENSUMAG00000018628) FARS2 (ENSUMAG00000018618) NRN1 (ENSUMAG00000018605) F13A1 (ENSUMAG00000018590) LY86 (ENSUMAG00000018575) ENSUMAG00000018533 RREB1 (ENSUMAG00000018518) SSR1 (ENSUMAG00000018496) Giant Panda MODERN SPECIES 15 MYLK4 (ENSAMEG00000010940) ENSAMEG00000025653 WRNIP1 (ENSAMEG00000027067) SERPINB1 (ENSAMEG00000003580) SERPINB9 (ENSAMEG00000003574) ENSAMEG00000003548 NQO2 (ENSAMEG00000014373) RIPK1 (ENSAMEG00000014389) BPHL (ENSAMEG00000014392) ENSAMEG00000014416 ENSAMEG00000023499 ENSAMEG00000030040 ENSAMEG00000014430 ENSAMEG00000014434 PXDC1 (ENSAMEG00000014456) FAM50B (ENSAMEG00000019077) ##22 PRPF4B (ENSAMEG00000012832) FAM217A (ENSAMEG00000012875) ENSAMEG00000012884 ECI2 (ENSAMEG00000012888) ENSAMEG00000012910 CDYL (ENSAMEG00000012914) RPP40 (ENSAMEG00000012938) PPP1R3G (ENSAMEG00000025070) LYRM4 (ENSAMEG00000017445) FARS2 (ENSAMEG00000027009) NRN1 (ENSAMEG00000024302) F13A1 (ENSAMEG00000017422) LY86 (ENSAMEG00000017416) RREB1 (ENSAMEG00000017412) SSR1 (ENSAMEG00000017395) Mustelinae ANCESTRAL SPECIES 42 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00390000012138.a.b.t.bb.a.b ENSGT00940000156211.b ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 Ferret MODERN SPECIES 202 FOXC1 (ENSMPUG00000018449) GMDS (ENSMPUG00000000399) ENSMPUG00000018450 MYLK4 (ENSMPUG00000000408) WRNIP1 (ENSMPUG00000000417) SERPINB1 (ENSMPUG00000000421) SERPINB9 (ENSMPUG00000000446) ENSMPUG00000000447 ENSMPUG00000000448 NQO2 (ENSMPUG00000000451) RIPK1 (ENSMPUG00000000454) BPHL (ENSMPUG00000000459) TUBB2B (ENSMPUG00000000462) SLC22A23 (ENSMPUG00000000466) PXDC1 (ENSMPUG00000000491) FAM50B (ENSMPUG00000000493) ##22 PRPF4B (ENSMPUG00000000500) FAM217A (ENSMPUG00000000502) ENSMPUG00000000507 ECI2 (ENSMPUG00000000515) CDYL (ENSMPUG00000000521) RPP40 (ENSMPUG00000000530) LYRM4 (ENSMPUG00000000532) FARS2 (ENSMPUG00000000534) ENSMPUG00000000537 ENSMPUG00000000540 ENSMPUG00000000541 F13A1 (ENSMPUG00000000546) LY86 (ENSMPUG00000000552) ENSMPUG00000000556 RREB1 (ENSMPUG00000000558) American mink MODERN SPECIES 158 FOXC1 (ENSNVIG00000011358) GMDS (ENSNVIG00000011372) MYLK4 (ENSNVIG00000011396) WRNIP1 (ENSNVIG00000011416) ILEU (ENSNVIG00000011445) SERPINB9 (ENSNVIG00000011466) ENSNVIG00000011489 NQO2 (ENSNVIG00000011533) RIPK1 (ENSNVIG00000011579) BPHL (ENSNVIG00000011595) TUBB2B (ENSNVIG00000011631) PSMG4 (ENSNVIG00000011643) SLC22A23 (ENSNVIG00000011656) PXDC1 (ENSNVIG00000011694) ENSNVIG00000011710 FAM50B (ENSNVIG00000011720) ##22 Felidae ANCESTRAL SPECIES 5 ENSGT00550000074840.z ENSGT01000000215059 ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519 ENSGT00940000156563 ENSGT00390000009819.a.b.a.a.b.b.b ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb ENSGT00940000167417.a ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 Cat MODERN SPECIES 236 MYLK4 (ENSFCAG00000034770) ENSFCAG00000034906 ENSFCAG00000053862 WRNIP1 (ENSFCAG00000042833) SERPINB1 (ENSFCAG00000008689) SERPINB9 (ENSFCAG00000000807) SERPINB6 (ENSFCAG00000000810) NQO2 (ENSFCAG00000024592) ENSFCAG00000026193 RIPK1 (ENSFCAG00000014625) BPHL (ENSFCAG00000046730) TUBB2B (ENSFCAG00000014626) PSMG4 (ENSFCAG00000046735) SLC22A23 (ENSFCAG00000025838) PXDC1 (ENSFCAG00000039703) FAM50B (ENSFCAG00000028350) ##22 PRPF4B (ENSFCAG00000030050) FAM217A (ENSFCAG00000012169) ENSFCAG00000045175 ECI2 (ENSFCAG00000012171) CDYL (ENSFCAG00000028494) RPP40 (ENSFCAG00000009249) PPP1R3G (ENSFCAG00000041787) LYRM4 (ENSFCAG00000038299) ENSFCAG00000051390 FARS2 (ENSFCAG00000014441) NRN1 (ENSFCAG00000030503) F13A1 (ENSFCAG00000015505) LY86 (ENSFCAG00000040059) RREB1 (ENSFCAG00000030069) SSR1 (ENSFCAG00000004763) Panthera ANCESTRAL SPECIES 30 ENSGT00550000074840.z ENSGT01000000215059 ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519 ENSGT00940000156563 ENSGT00390000009819.a.b.a.b ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb ENSGT00940000167417.a ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 Panthera_a ANCESTRAL SPECIES 32 ENSGT00550000074840.z ENSGT01000000215059 ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519 ENSGT00940000156563 ENSGT00390000009819.a.b.a.b ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb ENSGT00940000167417.a ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 lion MODERN SPECIES 28 MYLK4 (ENSPLOG00000017722) ENSPLOG00000017887 ENSPLOG00000017919 WRNIP1 (ENSPLOG00000017949) SERPINB1 (ENSPLOG00000018010) SERPINB9 (ENSPLOG00000018094) NQO2 (ENSPLOG00000018239) ENSPLOG00000018333 RIPK1 (ENSPLOG00000018363) BPHL (ENSPLOG00000018383) ENSPLOG00000018446 TUBB2B (ENSPLOG00000018497) ENSPLOG00000018533 SLC22A23 (ENSPLOG00000018579) PXDC1 (ENSPLOG00000018629) FAM50B (ENSPLOG00000018680) ##22 PRPF4B (ENSPLOG00000018709) FAM217A (ENSPLOG00000018759) ENSPLOG00000018809 ECI2 (ENSPLOG00000018858) CDYL (ENSPLOG00000018938) RPP40 (ENSPLOG00000019021) ENSPLOG00000019120 LYRM4 (ENSPLOG00000019169) FARS2 (ENSPLOG00000019222) NRN1 (ENSPLOG00000019270) F13A1 (ENSPLOG00000019314) ENSPLOG00000019351 LY86 (ENSPLOG00000019367) RREB1 (ENSPLOG00000019420) SSR1 (ENSPLOG00000012706) Laurasiatheria_c ANCESTRAL SPECIES 6 ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 Chiroptera ANCESTRAL SPECIES 50 ENSGT00940000162937.b ENSGT00940000162527 ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154519 ENSGT00940000154931 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 Microchiroptera ANCESTRAL SPECIES 1 ENSGT00940000162937.b ENSGT00940000162527 ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 ENSGT00940000154931 ENSGT00940000154573 ENSGT00940000154519 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 Greater horseshoe bat MODERN SPECIES 27 MYLK4 (ENSRFEG00010001828) WRNIP1 (ENSRFEG00010001786) ENSRFEG00010001768 SERPINB1 (ENSRFEG00010001747) ENSRFEG00010001710 ENSRFEG00010001648 ENSRFEG00010001556 NQO2 (ENSRFEG00010001518) ENSRFEG00010001506 RIPK1 (ENSRFEG00010001467) BPHL (ENSRFEG00010001423) TUBB2B (ENSRFEG00010001382) PSMG4 (ENSRFEG00010001338) SLC22A23 (ENSRFEG00010001273) PXDC1 (ENSRFEG00010001243) FAM50B (ENSRFEG00010001229) ##22 ENSRFEG00010001206 PRPF4B (ENSRFEG00010001165) FAM217A (ENSRFEG00010001133) ENSRFEG00010001108 ECI2 (ENSRFEG00010001054) CDYL (ENSRFEG00010001012) RPP40 (ENSRFEG00010000963) PPP1R3G (ENSRFEG00010000932) ENSRFEG00010000919 LYRM4 (ENSRFEG00010000898) FARS2 (ENSRFEG00010000859) NRN1 (ENSRFEG00010000833) F13A1 (ENSRFEG00010000803) LY86 (ENSRFEG00010000784) RREB1 (ENSRFEG00010000750) Megabat MODERN SPECIES 5125 PXDC1 (ENSPVAG00000010392) FAM50B (ENSPVAG00000010394) ##22 Equus ANCESTRAL SPECIES 47 ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT01000000214902 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT01090000263320 ENSGT00940000157533 Horse MODERN SPECIES 12 GMDS (ENSECAG00000001999) ENSECAG00000060133 MYLK4 (ENSECAG00000006224) WRNIP1 (ENSECAG00000008348) SERPINB1 (ENSECAG00000009896) SERPINB9 (ENSECAG00000012506) SERPINB6 (ENSECAG00000015966) NQO2 (ENSECAG00000008386) RIPK1 (ENSECAG00000010293) BPHL (ENSECAG00000013049) TUBB (ENSECAG00000020234) TUBB2B (ENSECAG00000058458) ENSECAG00000013813 SLC22A23 (ENSECAG00000013821) PXDC1 (ENSECAG00000014479) FAM50B (ENSECAG00000014818) ##22 ENSECAG00000033231 PRPF4B (ENSECAG00000014830) FAM217A (ENSECAG00000000041) ENSECAG00000000206 ECI2 (ENSECAG00000000313) ENSECAG00000046549 CDYL (ENSECAG00000014044) RPP40 (ENSECAG00000017247) ENSECAG00000050087 FARS2 (ENSECAG00000000279) NRN1 (ENSECAG00000007120) F13A1 (ENSECAG00000008295) LY86 (ENSECAG00000016805) ENSECAG00000054234 RREB1 (ENSECAG00000018169) Donkey MODERN SPECIES 27 GMDS (ENSEASG00005012197) MYLK4 (ENSEASG00005012193) WRNIP1 (ENSEASG00005012190) SERPINB1 (ENSEASG00005012189) SERPINB9 (ENSEASG00005012183) ENSEASG00005012179 NQO2 (ENSEASG00005012177) RIPK1 (ENSEASG00005012175) BPHL (ENSEASG00005012172) TUBB2A (ENSEASG00005030900) ENSEASG00005012165 TUBB2B (ENSEASG00005032707) PSMG4 (ENSEASG00005012153) SLC22A23 (ENSEASG00005012146) ENSEASG00005012139 FAM50B (ENSEASG00005012136) ##22 PRPF4B (ENSEASG00005012132) FAM217A (ENSEASG00005012129) ENSEASG00005012126 ECI2 (ENSEASG00005012124) ENSEASG00005032457 CDYL (ENSEASG00005012117) RPP40 (ENSEASG00005012116) PPP1R3G (ENSEASG00005030057) ENSEASG00005012113 FARS2 (ENSEASG00005012111) NRN1 (ENSEASG00005031623) F13A1 (ENSEASG00005012064) LY86 (ENSEASG00005035064) ENSEASG00005030569 RREB1 (ENSEASG00005012054) Artiodactyla ANCESTRAL SPECIES 15 ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000175246 ENSGT00940000154150.xb.t ENSGT00940000154150.xb.s.b ENSGT00940000167417.a ENSGT00940000154150.xb.s.a ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 Suina ANCESTRAL SPECIES 8 ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb.t ENSGT00940000154150.xb.s.b ENSGT00940000167417.a.b ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a ENSGT00390000001805 ENSGT00940000157075 Pig MODERN SPECIES 15 GMDS (ENSSSCG00000000994) FOXC1 (ENSSSCG00000039756) ENSSSCG00000028777 WRNIP1 (ENSSSCG00000001010) SERPINB1 (ENSSSCG00000001011) SERPINB9 (ENSSSCG00000031615) ENSSSCG00000038404 NQO2 (ENSSSCG00000020758) RIPK1 (ENSSSCG00000001009) BPHL (ENSSSCG00000001008) TUBB2A (ENSSSCG00000062050) TUBB2B (ENSSSCG00000033655) ENSSSCG00000036988 SLC22A23 (ENSSSCG00000001004) PXDC1 (ENSSSCG00000025582) FAM50B (ENSSSCG00000026323) ##22 PRPF4B (ENSSSCG00000001002) ENSSSCG00000001001 ECI2 (ENSSSCG00000001000) CDYL (ENSSSCG00000000999) RPP40 (ENSSSCG00000000998) PPP1R3G (ENSSSCG00000000997) LYRM4 (ENSSSCG00000031269) FARS2 (ENSSSCG00000038717) NRN1 (ENSSSCG00000026211) F13A1 (ENSSSCG00000024310) LY86 (ENSSSCG00000032355) ENSSSCG00000052423 ENSSSCG00000001021 SSR1 (ENSSSCG00000001022) CAGE1 (ENSSSCG00000038886) Chacoan peccary MODERN SPECIES 782 ENSCWAG00000010542 SLC22A23 (ENSCWAG00000010310) PXDC1 (ENSCWAG00000010256) FAM50B (ENSCWAG00000010231) ##22 PRPF4B (ENSCWAG00000010182) ENSCWAG00000010087 ECI2 (ENSCWAG00000010052) CDYL (ENSCWAG00000010005) RPP40 (ENSCWAG00000009919) PPP1R3G (ENSCWAG00000009874) ENSCWAG00000009842 FARS2 (ENSCWAG00000009775) NRN1 (ENSCWAG00000009740) F13A1 (ENSCWAG00000009538) LY86 (ENSCWAG00000009458) RREB1 (ENSCWAG00000009360) SSR1 (ENSCWAG00000009285) RIOK1 (ENSCWAG00000008806) DSP (ENSCWAG00000008400) Atlantogenata ANCESTRAL SPECIES 86 ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519.j ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00940000168960 ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a Afrotheria ANCESTRAL SPECIES 94 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519.i.a.a ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00940000167514 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00940000168960 ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a Tenrec MODERN SPECIES 4137 ENSETEG00000012938 ##22 Afrotheria_a ANCESTRAL SPECIES 96 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 ENSGT00940000154573 ENSGT00940000154931 ENSGT00940000154519.i.a.a ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00940000167514 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ##22 ENSGT00940000155562 ENSGT00940000154543.b ENSGT00940000168960 ENSGT00390000008360 ENSGT00940000155105 ENSGT00940000155106 ENSGT00390000014167 ENSGT00940000163747 ENSGT00940000157289.a ENSGT00940000158071 ENSGT00530000063853.a.a.b ENSGT01050000244939.a.a.a ENSGT00390000018605 ENSGT00940000157533 ENSGT00400000022103.a Elephant MODERN SPECIES 447 GMDS (ENSLAFG00000012336) MYLK4 (ENSLAFG00000014597) WRNIP1 (ENSLAFG00000014603) SERPINB1 (ENSLAFG00000006794) SERPINB9 (ENSLAFG00000007487) ENSLAFG00000011947 NQO2 (ENSLAFG00000031167) RIPK1 (ENSLAFG00000010059) BPHL (ENSLAFG00000010064) ENSLAFG00000010068 ENSLAFG00000031279 ENSLAFG00000027462 ENSLAFG00000032203 SLC22A23 (ENSLAFG00000012205) PXDC1 (ENSLAFG00000018619) FAM50B (ENSLAFG00000006170) ##22 PRPF4B (ENSLAFG00000004109) ENSLAFG00000027337 FAM217A (ENSLAFG00000022708) ENSLAFG00000027067 ECI2 (ENSLAFG00000000020) CDYL (ENSLAFG00000018419) RPP40 (ENSLAFG00000007530) PPP1R3G (ENSLAFG00000031926) LYRM4 (ENSLAFG00000020549) FARS2 (ENSLAFG00000007104) NRN1 (ENSLAFG00000012437) F13A1 (ENSLAFG00000010217) LY86 (ENSLAFG00000000519) RREB1 (ENSLAFG00000005300) SSR1 (ENSLAFG00000032677) Bilateria ANCESTRAL SPECIES ENSGT00390000004735.C ##22 Ecdysozoa ANCESTRAL SPECIES ENSGT00390000004735.C ##22 Caenorhabditis elegans MODERN SPECIES 5 oig-3 (WBGene00003861) Y50E8A.2 (WBGene00013047) Y50E8A.1 (WBGene00013046) R08A2.7 (WBGene00011137) R08A2.1 (WBGene00011132) fbxa-147 (WBGene00011135) R08A2.2 (WBGene00011133) R08A2.5 (WBGene00011136) ssp-33 (WBGene00011134) R08A2.9 (WBGene00219318) set-5 (WBGene00008145) unc-112 (WBGene00006836) gasr-8 (WBGene00008144) C47E8.11 (WBGene00044180) hsp-90 (WBGene00000915) C47E8.4 (WBGene00008143) ##22 C47E8.3 (WBGene00008142) C47E8.1 (WBGene00008141) C47E8.9 (WBGene00008146) srh-17 (WBGene00005242) slc-25A29 (WBGene00008320) pmp-3 (WBGene00004060) rfc-1 (WBGene00004337) C54G10.1 (WBGene00008319) F43D2.7 (WBGene00045516) F43D2.3 (WBGene00009652) F43D2.6 (WBGene00044191) hot-1 (WBGene00001986) ccnk-1 (WBGene00009650) R11H6.5 (WBGene00011253) R11H6.4 (WBGene00011252) Chordata ANCESTRAL SPECIES ENSGT00390000004735.C ##22 Ciona ANCESTRAL SPECIES 487 ENSGT00940000157051.a ENSGT00940000164330.q ENSGT00390000004735.C ##22 Ciona intestinalis MODERN SPECIES 12 ENSCING00000007356 ENSCING00000025107 ENSCING00000007349 ENSCING00000021325 ENSCING00000013198 ENSCING00000022412 ENSCING00000013199 ENSCING00000016834 ENSCING00000016831 ENSCING00000013197 ENSCING00000013196 ENSCING00000007369 ENSCING00000007376 ENSCING00000007375 ENSCING00000020590 ENSCING00000007370 ##22 ENSCING00000009878 ENSCING00000018090 ENSCING00000024897 ENSCING00000007428 ENSCING00000007427 ENSCING00000013187 ENSCING00000007425 ppar (ENSCING00000013188) ENSCING00000007419 ENSCING00000020435 ENSCING00000007416 ENSCING00000018712 ENSCING00000013190 ENSCING00000007415 ENSCING00000018281 Ciona savignyi MODERN SPECIES 276 ENSCSAVG00000005364 ENSCSAVG00000005498 ENSCSAVG00000005547 ENSCSAVG00000005549 ENSCSAVG00000005553 ENSCSAVG00000005556 ENSCSAVG00000005564 ENSCSAVG00000005605 ENSCSAVG00000005639 ENSCSAVG00000005647 ENSCSAVG00000005649 ENSCSAVG00000005653 ENSCSAVG00000005656 ENSCSAVG00000005821 ENSCSAVG00000006093 ENSCSAVG00000006195 ##22 ENSCSAVG00000006265 ENSCSAVG00000006279 ENSCSAVG00000006656 ENSCSAVG00000006660 ENSCSAVG00000006671 ENSCSAVG00000006678 ENSCSAVG00000006683 ENSCSAVG00000006688 ENSCSAVG00000006697 ENSCSAVG00000006718 ENSCSAVG00000006721 ENSCSAVG00000006736 ENSCSAVG00000007086 ENSCSAVG00000007100 ENSCSAVG00000007104 Vertebrata ANCESTRAL SPECIES ENSGT00390000004735.C ##22 Cyclostomata ANCESTRAL SPECIES ENSGT00390000004735.C ##22 Lamprey MODERN SPECIES 19 ENSPMAG00000007065 fam50a (ENSPMAG00000007051) ##22 Hagfish MODERN SPECIES 1010 ENSEBUG00000014228 ENSEBUG00000016852 ENSEBUG00000005460 ENSEBUG00000013763 ENSEBUG00000003186 copg2 (ENSEBUG00000012840) fam50a (ENSEBUG00000007329) ##22 ENSEBUG00000014965 ENSEBUG00000011197 ENSEBUG00000014521 ENSEBUG00000002170 ENSEBUG00000005753 ENSEBUG00000002678 ENSEBUG00000011759 mrpl14 (ENSEBUG00000013597) ENSEBUG00000011899 Gnathostomata ANCESTRAL SPECIES ENSGT00390000004735.C ##22 Euteleostomi ANCESTRAL SPECIES 1203 ENSGT00390000004735.C ##22 ENSGT01050000244850.A.a #23 Sarcopterygii ANCESTRAL SPECIES 820 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.C ##22 ENSGT01050000244850.A.a #23 Coelacanth MODERN SPECIES 1032 ENSLACG00000013851 ENSLACG00000013755 ENSLACG00000013729 gdi1 (ENSLACG00000013537) #21 fam50a (ENSLACG00000013235) ##22 HAUS7 (ENSLACG00000013093) ENSLACG00000012737 ##18 si:dkey-6n6.1 (ENSLACG00000011780) BGN (ENSLACG00000010257) ATP2B3 (ENSLACG00000006841) CCNQ (ENSLACG00000005744) rpl10 (ENSLACG00000005442) #17 dnase1l1l (ENSLACG00000004565) ##18 Tetrapoda ANCESTRAL SPECIES 221 ENSGT00940000153588.b ENSGT00390000003897 #17 ENSGT00950000182846.a.a.a.a.b ##18 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.C ##22 ENSGT01050000244850.A.a #23 Anura ANCESTRAL SPECIES 277 ENSGT00390000003897 #17 ENSGT00950000182846.a.a.a.a.b ##18 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.C ##22 ENSGT01050000244850.A.a #23 ENSGT00950000182827.B Frog MODERN SPECIES 8 rpl10 (ENSXETG00000010878) #17 dnase1l1 (ENSXETG00000045715) ##18 DNASE1L1 (ENSXETG00000048321) #18 slc25a20l (ENSXETG00000049485) tafazzin (ENSXETG00000003378) #19 atp6ap1.2 (ENSXETG00000003377) #20 gdi1 (ENSXETG00000003376) #21 fam50a (ENSXETG00000003375) ##22 plxna3 (ENSXETG00000003370) #23 SLC35A2 (ENSXETG00000047186) kcnd1 (ENSXETG00000023771) gripap1 (ENSXETG00000048719) tfe3 (ENSXETG00000047721) CCDC120 (ENSXETG00000043887) uba1 (ENSXETG00000047879) rhoa.2 (ENSXETG00000009241) ENSXETG00000041659 arhgef3.1 (ENSXETG00000025462) imp4 (ENSXETG00000045525) XB5795058 [provisional] (ENSXETG00000036260) sft2d3 (ENSXETG00000045709) ENSXETG00000043115 ENSXETG00000044331 Leishan spiny toad MODERN SPECIES 12 ENSLLEG00000015764 ENSLLEG00000015739 ENSLLEG00000015707 ENSLLEG00000015609 ENSLLEG00000015556 ENSLLEG00000015497 #20 ENSLLEG00000015472 ENSLLEG00000015453 ENSLLEG00000015440 ENSLLEG00000015372 #19 ENSLLEG00000015341 ENSLLEG00000015305 #19 ENSLLEG00000014957 ##18 ENSLLEG00000014916 GDI1 (ENSLLEG00000014696) #21 ENSLLEG00000014500 ##22 ENSLLEG00000014459 ENSLLEG00000014450 ENSLLEG00000014440 #23 ENSLLEG00000014195 #23 SLC35A2 (ENSLLEG00000014108) ENSLLEG00000014085 OTUD5 (ENSLLEG00000014017) ENSLLEG00000013910 ENSLLEG00000012337 COMT (ENSLLEG00000011999) ABT1 (ENSLLEG00000011917) ENSLLEG00000011864 GRM6 (ENSLLEG00000011740) ENSLLEG00000011625 NDUFB11 (ENSLLEG00000011577) Amniota ANCESTRAL SPECIES 40 ENSGT01030000234549.a.a.a.a.a.a ##14 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000161969 ENSGT00940000154471.a.a ENSGT00940000164911 ENSGT00390000002034 #16 ENSGT00390000003897.s.a ##17 ENSGT00950000182846.a.a.a.a.b ##18 ENSGT00940000153588.b ENSGT00390000003897.s.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.C ##22 ENSGT01050000244850.A.a #23 ENSGT00410000025802 #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 Sauria ANCESTRAL SPECIES 80 ENSGT00940000153588.b ENSGT00390000003897.s.a ##17 ENSGT00950000182846.a.a.a.a.b ##18 ENSGT00390000003897.t ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.C ##22 ENSGT01050000244850.A.a #23 ENSGT00410000025802 #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 Archelosauria ANCESTRAL SPECIES 75 ENSGT00940000155311.C ENSGT00940000160765 ENSGT00940000155445 ENSGT00940000161880 ENSGT00390000003937 ENSGT00940000153588.b ENSGT00390000003897.s.a ##17 ENSGT00950000182846.a.a.a.a.b ##18 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.C ##22 ENSGT01050000244850.A.a #23 Cryptodira ANCESTRAL SPECIES 95 ENSGT00940000155311.C ENSGT00940000160765 ENSGT00940000155445 ENSGT00940000161880 ENSGT00390000003937 ENSGT00940000153588.b ENSGT00390000003897.s.a ##17 ENSGT00950000182846.a.a.a.a.b ##18 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.C ##22 ENSGT01050000244850.A.a #23 Testudinoidea ANCESTRAL SPECIES 51 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000161969 ENSGT01060000248768 ENSGT00940000154471.a.a ENSGT00940000155311.C ENSGT00940000160765 ENSGT00940000155445 ENSGT00940000161880 ENSGT00940000153588.b ENSGT00390000003897.s.a ##17 ENSGT00950000182846.a.a.a.a.b ##18 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.C ##22 ENSGT01050000244850.A.a.g #23 ENSGT00950000183004.a.a.a.b #27 ENSGT00950000182808.b.b #26 ENSGT00730000111022 #25 ENSGT00410000025802 #24 ENSGT00940000165180 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00390000000950.c.a Testudinidae ANCESTRAL SPECIES 82 ENSGT00940000155311.C ENSGT00940000160765 ENSGT00940000155445 ENSGT00940000161880 ENSGT00390000003937 ENSGT00940000153588.b ENSGT00390000003897.s.a ##17 ENSGT00950000182846.a.a.a.a.b ##18 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.C ##22 ENSGT01050000244850.A.a.g #23 ENSGT00950000183004.a.a.a.b #27 ENSGT00950000182808.b.b #26 ENSGT00730000111022 #25 ENSGT00410000025802 #24 ENSGT00940000165180.g ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00390000000950.c.a Goode s thornscrub tortoise MODERN SPECIES 208 ATP6AP1 (ENSGEVG00005018411) #20 GDI1 (ENSGEVG00005018455) #21 ENSGEVG00005018472 ##22 ENSGEVG00005018491 #23 ENSGEVG00005014046 #23 ENSGEVG00005014125 #23 ENSGEVG00005014169 #27 SLC10A3 (ENSGEVG00005014243) #26 UBL4A (ENSGEVG00005014261) #25 ENSGEVG00005014282 #24 ENSGEVG00005014307 ENSGEVG00005014400 G6PD (ENSGEVG00005014601) #28 IKBKG (ENSGEVG00005014647) #29 Abingdon island giant tortoise MODERN SPECIES 1863 ATP2B3 (ENSCABG00000022671) ENSCABG00000022664 DUSP9 (ENSCABG00000022663) FLNA (ENSCABG00000016076) ENSCABG00000015472 ##17 ENSCABG00000015469 ##18 DNASE1L1 (ENSCABG00000015466) #18 ATP6AP1 (ENSCABG00000015464) #20 GDI1 (ENSCABG00000015246) #21 ENSCABG00000015173 ##22 Emydidae ANCESTRAL SPECIES 99 ENSGT00940000160765 ENSGT00940000155445 ENSGT00940000161880 ENSGT00940000153588.b ENSGT00390000003897.s.a ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.C ##22 ENSGT01050000244850.A.a.g #23 ENSGT00950000182808.b.b #26 ENSGT00730000111022 #25 ENSGT00410000025802 #24 ENSGT00940000165180.i ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00390000000950.c.a painted turtle MODERN SPECIES 1100 ATP2B3 (ENSCPBG00000014832) CCNQ (ENSCPBG00000015958) DUSP9 (ENSCPBG00000015962) FLNA (ENSCPBG00000015968) ENSCPBG00000015988 ##17 ENSCPBG00000015995 DNASE1L1 (ENSCPBG00000015997) #18 TAFAZZIN (ENSCPBG00000016003) #19 ATP6AP1 (ENSCPBG00000016015) #20 GDI1 (ENSCPBG00000016047) #21 ENSCPBG00000017165 ##22 ENSCPBG00000017169 #23 ENSCPBG00000017177 #23 ENSCPBG00000017179 ##23 FAM3A (ENSCPBG00000017182) #27 UBL4A (ENSCPBG00000017185) #25 ENSCPBG00000017187 #24 ENSCPBG00000017191 ENSCPBG00000017205 G6PD (ENSCPBG00000017207) #28 IKBKG (ENSCPBG00000017209) #29 SEPHS2 (ENSCPBG00000017210) ENSCPBG00000017211 ENSCPBG00000017213 ENSCPBG00000017215 ENSCPBG00000017216 Archosauria ANCESTRAL SPECIES ENSGT00390000004735.C ##22 Aves ANCESTRAL SPECIES ENSGT00390000004735.C ##22 Neognathae ANCESTRAL SPECIES ENSGT00390000004735.C ##22 Neognathae_b ANCESTRAL SPECIES 88 ENSGT00940000156650 #20 ENSGT00390000004735.C ##22 ENSGT00730000111022 #25 ENSGT00950000183004.a.a.a.b #27 Passeriformes ANCESTRAL SPECIES 116 ENSGT00940000156650 #20 ENSGT00390000004735.C ##22 ENSGT00730000111022 #25 ENSGT00950000183004.a.a.a.b #27 Passeriformes_d ANCESTRAL SPECIES 114 ENSGT00940000156650 #20 ENSGT00390000004735.C ##22 ENSGT00730000111022 #25 ENSGT00950000183004.a.a.a.b #27 Passeriformes_g ANCESTRAL SPECIES 124 ENSGT00940000156650 #20 ENSGT00390000004735.C ##22 ENSGT00730000111022 #25 ENSGT00950000183004.a.a.a.b #27 Passeroidea ANCESTRAL SPECIES 131 ENSGT00940000156650 #20 ENSGT00390000004735.C ##22 ENSGT00730000111022 #25 ENSGT00950000183004.a.a.a.b #27 Zebra finch DUPLICATION Zebra finch MODERN SPECIES 38 ENSTGUG00000021341 ENSTGUG00000020752 ENSTGUG00000016898 OTUB1 (ENSTGUG00000025728) ENSTGUG00000019325 STIP1 (ENSTGUG00000027054) ENSTGUG00000028623 ENSTGUG00000028505 ENSTGUG00000025619 #29 ENSTGUG00000028372 #28 ENSTGUG00000026874 ENSTGUG00000029095 ENSTGUG00000028272 ##22 ENSTGUG00000023922 #20 ENSTGUG00000026572 ENSTGUG00000029513 ##22 ENSTGUG00000019505 #25 ENSTGUG00000029591 #27 ENSTGUG00000024536 ENSTGUG00000029170 #28 ENSTGUG00000023778 #29 ENSTGUG00000022156 ENSTGUG00000023191 ENSTGUG00000024744 ENSTGUG00000028554 ENSTGUG00000019119 ENSTGUG00000028864 ENSTGUG00000025548 ENSTGUG00000019270 WDR45 (ENSTGUG00000023573) ENSTGUG00000019637 Zebra finch MODERN SPECIES 38 ENSTGUG00000025548 ENSTGUG00000028864 ENSTGUG00000019119 ENSTGUG00000028554 ENSTGUG00000024744 ENSTGUG00000023191 ENSTGUG00000022156 ENSTGUG00000023778 #29 ENSTGUG00000029170 #28 ENSTGUG00000024536 ENSTGUG00000029591 #27 ENSTGUG00000019505 #25 ENSTGUG00000029513 ##22 ENSTGUG00000026572 ENSTGUG00000023922 #20 ENSTGUG00000028272 ##22 ENSTGUG00000029095 ENSTGUG00000026874 ENSTGUG00000028372 #28 ENSTGUG00000025619 #29 ENSTGUG00000028505 ENSTGUG00000028623 STIP1 (ENSTGUG00000027054) ENSTGUG00000019325 OTUB1 (ENSTGUG00000025728) ENSTGUG00000016898 ENSTGUG00000020752 ENSTGUG00000021341 ENSTGUG00000019970 ENSTGUG00000026586 ENSTGUG00000027373 Neognathae_c ANCESTRAL SPECIES 92 ENSGT00940000156650 #20 ENSGT00390000004735.C ##22 ENSGT00730000111022 #25 ENSGT00950000183004.a.a.a.b #27 Kakapo MODERN SPECIES 27 ENSSHBG00005007307 WAS (ENSSHBG00005007327) GRIPAP1 (ENSSHBG00005007370) ENSSHBG00005007409 ##17 PDZD4 (ENSSHBG00005007435) L1CAM (ENSSHBG00005007471) #7 SSR4 (ENSSHBG00005007493) IDH3G (ENSSHBG00005007512) SRPK3 (ENSSHBG00005007575) OTUD5 (ENSSHBG00005007642) ENSSHBG00005007668 CCDC120 (ENSSHBG00005007693) MECP2 (ENSSHBG00005007709) #13 SYP (ENSSHBG00005007854) ATP6AP1 (ENSSHBG00005007878) #20 ENSSHBG00005007944 ##22 UBL4A (ENSSHBG00005007963) #25 ENSSHBG00005007974 #27 ENSSHBG00005008000 #28 GATA1 (ENSSHBG00005008065) ENSSHBG00005008057 PORCN (ENSSHBG00005008085) SLC35A2 (ENSSHBG00005008109) ENSSHBG00005008129 SEPHS2 (ENSSHBG00005008143) ENSSHBG00005008159 IKBKG (ENSSHBG00005008187) #29 ENSSHBG00005008249 #28 ENSSHBG00005008388 #27 ENSSHBG00005008400 #22 ENSSHBG00005008422 Lepidosauria ANCESTRAL SPECIES 38 ENSGT00940000155445 ENSGT00940000161880 ENSGT00940000162187 ENSGT00940000155869 ENSGT00390000011863.c ENSGT00950000182955.a.b.a ENSGT01020000230394.e.a.a.b.a.b ENSGT00940000157877.b ENSGT00950000182989.D.a.a ENSGT00390000003897.t ##17 ENSGT00950000182846.a.a.a.a.b ##18 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.C ##22 ENSGT01050000244850.A.a #23 ENSGT00410000025802 #24 ENSGT00730000111022.m #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00940000164196 ENSGT00940000165056 ENSGT00940000156319 ENSGT00900000142661.a ENSGT00940000155877 ENSGT00940000159438 ENSGT00390000012692 ENSGT00940000160145.b ENSGT00940000162980 ENSGT00940000163627 Episquamata ANCESTRAL SPECIES 23 ENSGT00940000155445 ENSGT00940000161880 ENSGT00940000162187 ENSGT00940000155869 ENSGT00390000011863.c ENSGT00950000182955.a.b.a ENSGT01020000230394.e.a.a.b.a.b ENSGT00940000157877.b ENSGT00950000182989.D.a.a ENSGT00390000003897.t ##17 ENSGT00950000182846.a.a.a.a.b ##18 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.C ##22 ENSGT01050000244850.A.a #23 ENSGT00410000025802 #24 ENSGT00730000111022.m #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00940000164196 ENSGT00940000165056 ENSGT00940000156319 ENSGT00940000155877 ENSGT00940000159438 ENSGT00390000012692 ENSGT00940000160145.b Laterata ANCESTRAL SPECIES 7 ENSGT00940000160765 ENSGT00940000155445 ENSGT00940000161880 ENSGT00940000162187 ENSGT00940000155869 ENSGT00390000011863.c ENSGT00950000182955.a.b.a ENSGT01020000230394.e.a.a.b.a.b ENSGT00940000157877.b ENSGT00950000182989.D.a.a ENSGT00390000003897.t ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.C ##22 ENSGT01050000244850.A.a #23 ENSGT00410000025802 #24 ENSGT00730000111022.m #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00940000164196 ENSGT00940000165056 ENSGT00940000156319 ENSGT00940000155877 ENSGT00940000159438 ENSGT00390000012692 ENSGT00940000160145.b ENSGT00530000063168.a.a.b ENSGT00940000157847 ENSGT00940000162980 Common wall lizard MODERN SPECIES 8 ATP2B3 (ENSPMRG00000023951) CCNQ (ENSPMRG00000023950) DUSP9 (ENSPMRG00000023948) PNCK (ENSPMRG00000023947) ENSPMRG00000023946 BCAP31 (ENSPMRG00000023945) ABCD1 (ENSPMRG00000023944) PLXNB3 (ENSPMRG00000023943) SRPK3 (ENSPMRG00000023942) IDH3G (ENSPMRG00000023941) ENSPMRG00000023939 ##17 DNASE1L1 (ENSPMRG00000023938) #18 TAFAZZIN (ENSPMRG00000023937) #19 ATP6AP1 (ENSPMRG00000023936) #20 GDI1 (ENSPMRG00000023935) #21 ENSPMRG00000023934 ##22 PLXNA3 (ENSPMRG00000023922) #23 ENSPMRG00000023892 ENSPMRG00000023891 #24 ENSPMRG00000023889 ENSPMRG00000023888 SLC10A3 (ENSPMRG00000023887) #26 ENSPMRG00000023792 ENSPMRG00000023721 HUWE1 (ENSPMRG00000022312) GNL3L (ENSPMRG00000021260) FGD1 (ENSPMRG00000021196) TSR2 (ENSPMRG00000021183) ENSPMRG00000021178 WNK3 (ENSPMRG00000021103) FAM120C (ENSPMRG00000021045) Argentine black and white tegu MODERN SPECIES 12 ATP2B3 (ENSSMRG00000002530) CCNQ (ENSSMRG00000002583) DUSP9 (ENSSMRG00000002591) PNCK (ENSSMRG00000002638) ENSSMRG00000002650 BCAP31 (ENSSMRG00000002653) ABCD1 (ENSSMRG00000002654) PLXNB3 (ENSSMRG00000002754) SRPK3 (ENSSMRG00000002758) IDH3G (ENSSMRG00000002761) ENSSMRG00000002764 ##17 DNASE1L1 (ENSSMRG00000002768) #18 TAFAZZIN (ENSSMRG00000002769) #19 ATP6AP1 (ENSSMRG00000002776) #20 GDI1 (ENSSMRG00000002779) #21 ENSSMRG00000002783 ##22 PLXNA3 (ENSSMRG00000002851) #23 ENSSMRG00000002873 #24 UBL4A (ENSSMRG00000002875) #25 SLC10A3 (ENSSMRG00000002876) #26 FAM3A (ENSSMRG00000002877) #27 ENSSMRG00000002878 ENSSMRG00000002927 HUWE1 (ENSSMRG00000003040) GNL3L (ENSSMRG00000019063) FGD1 (ENSSMRG00000019064) TSR2 (ENSSMRG00000019128) WNK3 (ENSSMRG00000019129) SSR4 (ENSSMRG00000019131) FAM120C (ENSSMRG00000019133) PHF8 (ENSSMRG00000019134) Toxicofera ANCESTRAL SPECIES 6 ENSGT00940000155445 ENSGT00940000161880 ENSGT00940000162187 ENSGT00940000155869 ENSGT00390000011863.c ENSGT00950000182955.a.b.a ENSGT01020000230394.e.a.a.b.a.b ENSGT00940000157877.b ENSGT00950000182989.D.a.a ENSGT00390000003897.t ##17 ENSGT00950000182846.a.a.a.a.b ##18 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.C ##22 ENSGT01050000244850.A.a #23 ENSGT00410000025802 #24 ENSGT00730000111022.m #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00940000164196 ENSGT00940000165056 ENSGT00940000156319 ENSGT00940000155877 ENSGT00940000159438 ENSGT00390000012692 ENSGT00940000160145.b ENSGT00530000063168.a.a.b ENSGT00940000157847 ENSGT00940000162980 Elapidae ANCESTRAL SPECIES 21 ENSGT00940000155445 ENSGT00940000161880 ENSGT00940000162187 ENSGT00940000155869 ENSGT00390000011863.c ENSGT00950000182955.a.b.a ENSGT01020000230394.e.a.a.b.a.b.b ENSGT00940000157877.b ENSGT00950000182989.D.a.a ENSGT00390000003897.t ##17 ENSGT00950000182846.a.a.a.a.b ##18 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.C ##22 ENSGT01050000244850.A.a #23 ENSGT00410000025802 #24 ENSGT00730000111022.m #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00940000164196 ENSGT00940000165056 ENSGT00940000156319.l ENSGT00940000155877 ENSGT00940000159438 ENSGT00390000012692 ENSGT00940000160145.b ENSGT00530000063168.a.a.b ENSGT00940000157847 ENSGT00940000162980.a Elapidae_a ANCESTRAL SPECIES 23 ENSGT00940000161880 ENSGT00940000162187 ENSGT00940000155869 ENSGT00390000011863.c ENSGT00950000182955.a.b.a.f ENSGT00950000182955.a.b.a.e ENSGT01020000230394.e.a.a.b.a.b.b ENSGT00940000157877.b ENSGT00950000182989.D.a.a ENSGT00390000003897.t ##17 ENSGT00950000182846.a.a.a.a.b ##18 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.C ##22 ENSGT01050000244850.A.a #23 ENSGT00410000025802 #24 ENSGT00730000111022.m #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00940000164196 ENSGT00940000165056 ENSGT00940000156319.l ENSGT00940000155877 ENSGT00940000159438 ENSGT00390000012692 ENSGT00940000160145.b ENSGT00530000063168.a.a.b ENSGT00940000157847 ENSGT00940000162980.a Acanthophiinae ANCESTRAL SPECIES 23 ENSGT00940000161880 ENSGT00940000162187 ENSGT00940000155869 ENSGT00390000011863.c ENSGT00950000182955.a.b.a.f ENSGT00950000182955.a.b.a.e ENSGT01020000230394.e.a.a.b.a.b.b ENSGT00940000157877.b ENSGT00950000182989.D.a.a ENSGT00390000003897.t ##17 ENSGT00950000182846.a.a.a.a.b ##18 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.C ##22 ENSGT01050000244850.A.a #23 ENSGT00410000025802 #24 ENSGT00730000111022.m #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00940000164196 ENSGT00940000165056 ENSGT00940000156319.l ENSGT00940000155877 ENSGT00940000159438 ENSGT00390000012692 ENSGT00940000160145.b ENSGT00530000063168.a.a.b ENSGT00940000157847 ENSGT00940000162980.a Mainland tiger snake MODERN SPECIES 81 ENSNSUG00000015693 ENSNSUG00000015694 BCAP31 (ENSNSUG00000015695) ENSNSUG00000015696 ENSNSUG00000015697 ENSNSUG00000015698 ENSNSUG00000015699 SRPK3 (ENSNSUG00000015700) IDH3G (ENSNSUG00000015701) ENSNSUG00000015702 ##17 ENSNSUG00000015704 ##18 DNASE1L1 (ENSNSUG00000015705) #18 TAFAZZIN (ENSNSUG00000015706) #19 ATP6AP1 (ENSNSUG00000015714) #20 GDI1 (ENSNSUG00000015732) #21 ENSNSUG00000015733 ##22 ENSNSUG00000015735 #23 ENSNSUG00000015736 #23 ENSNSUG00000015737 #24 UBL4A (ENSNSUG00000015738) #25 SLC10A3 (ENSNSUG00000015739) #26 FAM3A (ENSNSUG00000015740) #27 ENSNSUG00000015779 ENSNSUG00000018905 HUWE1 (ENSNSUG00000018906) GNL3L (ENSNSUG00000019744) FGD1 (ENSNSUG00000019745) TSR2 (ENSNSUG00000019746) WNK3 (ENSNSUG00000019747) FAM120C (ENSNSUG00000019748) PHF8 (ENSNSUG00000019749) Eastern brown snake MODERN SPECIES 52 DUSP9 (ENSPTXG00000005701) PNCK (ENSPTXG00000005709) ENSPTXG00000005710 BCAP31 (ENSPTXG00000005711) ENSPTXG00000005712 ENSPTXG00000005713 PLXNB3 (ENSPTXG00000005731) SRPK3 (ENSPTXG00000007997) IDH3G (ENSPTXG00000007998) ENSPTXG00000007999 ##17 ENSPTXG00000006589 ##18 DNASE1L1 (ENSPTXG00000006590) #18 TAFAZZIN (ENSPTXG00000006591) #19 ATP6AP1 (ENSPTXG00000006592) #20 GDI1 (ENSPTXG00000006593) #21 ENSPTXG00000006594 ##22 PLXNA3 (ENSPTXG00000006595) #23 ENSPTXG00000006706 #24 UBL4A (ENSPTXG00000006707) #25 SLC10A3 (ENSPTXG00000006709) #26 FAM3A (ENSPTXG00000006710) #27 ENSPTXG00000006711 ENSPTXG00000006712 HUWE1 (ENSPTXG00000006728) GNL3L (ENSPTXG00000006749) FGD1 (ENSPTXG00000006759) TSR2 (ENSPTXG00000007843) WNK3 (ENSPTXG00000007846) PHF8 (ENSPTXG00000007848) ITIH6 (ENSPTXG00000007849) ENSPTXG00000007890 Blue-lipped sea krait MODERN SPECIES 867 ENSLLTG00000002579 ##22 Indian cobra MODERN SPECIES 1 PNCK (ENSNNAG00000007117) ENSNNAG00000004889 BCAP31 (ENSNNAG00000004742) ABCD1 (ENSNNAG00000004643) ENSNNAG00000004620 ENSNNAG00000004602 ENSNNAG00000018745 ENSNNAG00000018733 ENSNNAG00000018721 IDH3G (ENSNNAG00000018712) ENSNNAG00000018704 ##17 DNASE1L1 (ENSNNAG00000018696) #18 TAFAZZIN (ENSNNAG00000018691) #19 ATP6AP1 (ENSNNAG00000018685) #20 GDI1 (ENSNNAG00000018677) #21 ENSNNAG00000018671 ##22 ENSNNAG00000018668 #23 ENSNNAG00000018666 #23 ENSNNAG00000018664 #24 UBL4A (ENSNNAG00000018662) #25 SLC10A3 (ENSNNAG00000018658) #26 FAM3A (ENSNNAG00000018651) #27 ENSNNAG00000018634 ENSNNAG00000018596 HUWE1 (ENSNNAG00000014942) GNL3L (ENSNNAG00000014245) ENSNNAG00000014231 FGD1 (ENSNNAG00000014192) TSR2 (ENSNNAG00000014165) WNK3 (ENSNNAG00000013960) FAM120C (ENSNNAG00000013861) Lizard MODERN SPECIES HIVEP2 (ENSACAG00000008187) ENSACAG00000038334 ENSACAG00000044016 ENSACAG00000035407 ENSACAG00000029347 ADAT2 (ENSACAG00000028361) PEX3 (ENSACAG00000008093) FUCA2 (ENSACAG00000008062) AKAP7 (ENSACAG00000001820) ENSACAG00000040502 ENSACAG00000001836 MED23 (ENSACAG00000001630) ENPP3 (ENSACAG00000001394) ENPP1 (ENSACAG00000001235) CCN2 (ENSACAG00000000985) ENSACAG00000005285 ##22 PLXNA3 (ENSACAG00000005063) #23 ENSACAG00000034714 #24 UBL4A (ENSACAG00000043371) #25 SLC10A3 (ENSACAG00000005038) #26 FAM3A (ENSACAG00000004999) #27 ENSACAG00000004854 ENSACAG00000004622 ENSACAG00000023284 ENSACAG00000004234 ENSACAG00000036892 ENSACAG00000042765 GNL3L (ENSACAG00000012525) FGD1 (ENSACAG00000012290) TSR2 (ENSACAG00000012270) WNK3 (ENSACAG00000012261) tuatara MODERN SPECIES 510 ENSSPUG00000010847 ##22 ENSSPUG00000010833 Mammalia ANCESTRAL SPECIES 46 ENSGT01030000234549.a.a.a.a.a.a ##14 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000161969 ENSGT00940000154471.a.a ENSGT00940000164911 ENSGT00390000002034 #16 ENSGT00940000153588.b ENSGT00390000003897.s.b #17 ENSGT00950000182846.a.a.a.a.b ##18 ENSGT00390000003897.s.a ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.C ##22 ENSGT01050000244850.A.a #23 ENSGT00410000025802 #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00940000165180 Platypus MODERN SPECIES 17 ENSOANG00000040139 #13 ENSOANG00000037077 ##14 OPN1LW (ENSOANG00000011023) #14 ENSOANG00000045052 #15 TKTL2 (ENSOANG00000045224) ENSOANG00000011020 ENSOANG00000011019 ENSOANG00000036188 #16 FLNA (ENSOANG00000011016) ENSOANG00000011015 ##17 ENSOANG00000011014 ##18 ENSOANG00000049949 #18 TAFAZZIN (ENSOANG00000012765) #19 ENSOANG00000050800 #20 GDI1 (ENSOANG00000042523) #21 ENSOANG00000004116 ##22 PLXNA3 (ENSOANG00000007979) #23 UBL4A (ENSOANG00000048880) #25 SLC10A3 (ENSOANG00000043297) #26 FAM3A (ENSOANG00000047703) #27 ENSOANG00000011544 ENSOANG00000000366 G6PD (ENSOANG00000000365) #28 IKBKG (ENSOANG00000000364) #29 SEPHS2 (ENSOANG00000050756) ENSOANG00000036091 ENSOANG00000046749 ENSOANG00000043763 ENSOANG00000000356 ENSOANG00000003034 ENSOANG00000046823 Theria ANCESTRAL SPECIES 46 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000161969 ENSGT00940000154471.a.a ENSGT00390000002034 #16 ENSGT00940000153588.b ENSGT00390000003897.s.b #17 ENSGT00950000182846.a.a.a.a.b ##18 ENSGT00390000003897.s.a ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.C ##22 ENSGT01050000244850.A.a #23 ENSGT00410000025802 #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00390000000950.c.a ENSGT01030000240148 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00940000160294 ENSGT00940000154783 ENSGT00390000012647 Eutheria ANCESTRAL SPECIES 16 ENSGT00940000166196 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00390000002034 #16 ENSGT00940000153588.b ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.C ##22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT01100000263574.b.i.b ENSGT01100000263574.b.i.a ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 Atlantogenata ANCESTRAL SPECIES 70 ENSGT00940000166196 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00390000002034 #16 ENSGT00940000153588.b ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.C ##22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.h ##24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00390000016992 ENSGT00940000160294 Afrotheria ANCESTRAL SPECIES 82 ENSGT00940000166196 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT00940000162426 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00390000002034 #16 ENSGT00940000153588.b ENSGT00390000003897.s.a ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.C ##22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.h ##24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00390000016992 ENSGT00940000160294 Afrotheria_a ANCESTRAL SPECIES 81 ENSGT00390000013740 ENSGT00940000166196 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT01030000234549.a.a.a.b #14 ENSGT00940000162843 #15 ENSGT00390000002034 #16 ENSGT00940000153588.b ENSGT00390000003897.s.a ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.C ##22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.h ##24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00390000016992 ENSGT00940000160294 Hyrax MODERN SPECIES 5854 ATP6AP1 (ENSPCAG00000015619) #20 GDI1 (ENSPCAG00000015676) #21 ENSPCAG00000015755 ##22 PLXNA3 (ENSPCAG00000015846) #23 ENSPCAG00000016044 ##24 ENSPCAG00000016095 #25 SLC10A3 (ENSPCAG00000016167) #26 FAM3A (ENSPCAG00000016197) #27 Elephant MODERN SPECIES 50 HCFC1 (ENSLAFG00000004418) #11 TMEM187 (ENSLAFG00000003455) IRAK1 (ENSLAFG00000016212) #12 MECP2 (ENSLAFG00000016292) #13 ENSLAFG00000027266 ENSLAFG00000010311 #14 ENSLAFG00000005142 #15 ENSLAFG00000005145 EMD (ENSLAFG00000005993) #16 FLNA (ENSLAFG00000006359) ENSLAFG00000031860 ##17 DNASE1L1 (ENSLAFG00000003498) #18 TAFAZZIN (ENSLAFG00000003502) #19 ATP6AP1 (ENSLAFG00000008757) #20 GDI1 (ENSLAFG00000008761) #21 ENSLAFG00000008766 ##22 PLXNA3 (ENSLAFG00000031276) #23 ENSLAFG00000016044 ##24 UBL4A (ENSLAFG00000022192) #25 SLC10A3 (ENSLAFG00000011108) #26 FAM3A (ENSLAFG00000032131) #27 G6PD (ENSLAFG00000010694) #28 IKBKG (ENSLAFG00000026529) #29 ENSLAFG00000010146 ENSLAFG00000028603 GAB3 (ENSLAFG00000001708) DKC1 (ENSLAFG00000000221) MPP1 (ENSLAFG00000011928) SMIM9 (ENSLAFG00000032056) ENSLAFG00000003610 F8 (ENSLAFG00000015274) Tenrec MODERN SPECIES 6123 ATP6AP1 (ENSETEG00000011613) #20 ENSETEG00000011617 #21 ENSETEG00000011619 ##22 PLXNA3 (ENSETEG00000011621) #23 Xenarthra ANCESTRAL SPECIES 103 ENSGT00390000013740 ENSGT00940000166196 ENSGT00940000161383 #11 ENSGT00390000011272 ENSGT00940000160502 #12 ENSGT00530000063687.b.b.b #13 ENSGT00940000162843 #15 ENSGT00940000162426 ENSGT00390000002034 #16 ENSGT00940000153588.b ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.C ##22 ENSGT01050000244850.A.a #23 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 Armadillo DUPLICATION Armadillo MODERN SPECIES 1745 NMU (ENSDNOG00000043728) PDCL2 (ENSDNOG00000011957) CLOCK (ENSDNOG00000018101) TMEM165 (ENSDNOG00000005563) SRD5A3 (ENSDNOG00000013022) KDR (ENSDNOG00000015773) KIT (ENSDNOG00000016105) PDGFRA (ENSDNOG00000009157) GSX2 (ENSDNOG00000045933) CHIC2 (ENSDNOG00000036093) LNX1 (ENSDNOG00000004341) ENSDNOG00000038304 ENSDNOG00000046441 ENSDNOG00000033452 RASL11B (ENSDNOG00000030799) ENSDNOG00000033495 ##22 ENSDNOG00000033407 USP46 (ENSDNOG00000008788) SPATA18 (ENSDNOG00000046768) SGCB (ENSDNOG00000037564) LRRC66 (ENSDNOG00000043084) RHOBTB2 (ENSDNOG00000042308) Armadillo MODERN SPECIES 4500 RENBP (ENSDNOG00000024828) ENSDNOG00000043559 HCFC1 (ENSDNOG00000047555) #11 TMEM187 (ENSDNOG00000003232) IRAK1 (ENSDNOG00000014412) #12 MECP2 (ENSDNOG00000013419) #13 TEX28 (ENSDNOG00000018401) #15 TKTL1 (ENSDNOG00000024515) EMD (ENSDNOG00000048541) #16 FLNA (ENSDNOG00000037289) ENSDNOG00000037062 #17 DNASE1L1 (ENSDNOG00000045597) #18 TAFAZZIN (ENSDNOG00000049167) #19 ATP6AP1 (ENSDNOG00000015526) #20 GDI1 (ENSDNOG00000040963) #21 ENSDNOG00000041781 ##22 PLXNA3 (ENSDNOG00000025707) #23 UBL4A (ENSDNOG00000002769) #25 SLC10A3 (ENSDNOG00000035600) #26 FAM3A (ENSDNOG00000006532) #27 G6PD (ENSDNOG00000010727) #28 IKBKG (ENSDNOG00000010758) #29 Marsupialia ANCESTRAL SPECIES 39 ENSGT00390000002034 #16 ENSGT00940000153588.b ENSGT00390000003897.s.b #17 ENSGT00950000182846.a.a.a.a.b ##18 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650.g.b #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.C ##22 ENSGT01050000244850.A.a #23 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00940000165180 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00390000000950.c.a.g ENSGT01030000240148 ENSGT01100000263574.b.j.b.b.a ENSGT01100000263570.B.z ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00940000160294 Marsupialia_b DUPLICATION Marsupialia_b DUPLICATION Marsupialia_b ANCESTRAL SPECIES 35 ENSGT00390000002034 #16 ENSGT00940000153588.b ENSGT00390000003897.s.b.d.b #17 ENSGT00950000182846.a.a.a.a.b ##18 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650.g.b #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.C.e.a ##22 ENSGT01050000244850.A.a #23 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00940000165180 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00390000000950.c.a.g ENSGT01030000240148 ENSGT01100000263574.b.j.b.b.a ENSGT01100000263570.B.z ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00940000160294 Diprotodontia ANCESTRAL SPECIES 79 ENSGT00390000002034 #16 ENSGT00940000153588.b ENSGT00390000003897.s.b.d.b #17 ENSGT00950000182846.a.a.a.a.b ##18 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650.g.b.a #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.C.e.a ##22 ENSGT01050000244850.A.a #23 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00940000165180 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00390000000950.c.a.g ENSGT01030000240148 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00940000160294 ENSGT00940000154783 ENSGT00390000012647 Diprotodontia_a DUPLICATION Diprotodontia_a ANCESTRAL SPECIES ENSGT00390000004735.C.e.a.a ##22 Common wonbat DUPLICATION Common wonbat MODERN SPECIES 1131 ENSVURG00010019965 ENSVURG00010019954 ENSVURG00010019909 ENSVURG00010019862 ENSVURG00010019848 ENSVURG00010019802 ENSVURG00010019788 ##22 ENSVURG00010019782 ENSVURG00010019763 ENSVURG00010019758 ENSVURG00010019749 ENSVURG00010019738 ENSVURG00010019729 ENSVURG00010019715 ENSVURG00010019702 ENSVURG00010019688 ENSVURG00010019679 ENSVURG00010019586 ENSVURG00010019507 ENSVURG00010019453 ENSVURG00010019140 ENSVURG00010019116 Common wonbat MODERN SPECIES 1131 ENSVURG00010013481 ENSVURG00010013473 ENSVURG00010013462 PSMC1 (ENSVURG00010013446) NRDE2 (ENSVURG00010013433) CALM1 (ENSVURG00010013395) ENSVURG00010013381 TTC7B (ENSVURG00010013368) RPS6KA5 (ENSVURG00010013346) ENSVURG00010013338 ENSVURG00010013325 ENSVURG00010011327 ENSVURG00010011225 ENSVURG00010011213 ENSVURG00010011172 ENSVURG00010011161 ##22 ENSVURG00010011154 ENSVURG00010011141 ENSVURG00010011133 ENSVURG00010011119 ENSVURG00010011109 ENSVURG00010011096 ENSVURG00010011081 ENSVURG00010011066 ENSVURG00010011057 ENSVURG00010011051 ENSVURG00010010766 ENSVURG00010010624 ENSVURG00010010526 ENSVURG00010010231 ENSVURG00010010186 koala MODERN SPECIES 41 AFF4 (ENSPCIG00000000197) ENSPCIG00000000228 ENSPCIG00000000300 GDF9 (ENSPCIG00000000319) SOWAHA (ENSPCIG00000000331) ENSPCIG00000000355 KIF3A (ENSPCIG00000000389) ENSPCIG00000000419 RAD50 (ENSPCIG00000000437) IL5 (ENSPCIG00000000474) IRF1 (ENSPCIG00000000595) ENSPCIG00000000632 ENSPCIG00000000667 PDLIM4 (ENSPCIG00000000968) ENSPCIG00000000988 ENSPCIG00000007200 ##22 P4HA2 (ENSPCIG00000001023) ENSPCIG00000007531 ENSPCIG00000013616 ENSPCIG00000013467 ENSPCIG00000013466 FNIP1 (ENSPCIG00000013462) RAPGEF6 (ENSPCIG00000001038) FSTL4 (ENSPCIG00000000975) C5orf15 (ENSPCIG00000021870) ENSPCIG00000027455 ENSPCIG00000021868 SKP1 (ENSPCIG00000021864) CDKL3 (ENSPCIG00000021862) ENSPCIG00000021861 CDKN2AIPNL (ENSPCIG00000034137) Diprotodontia_a ANCESTRAL SPECIES 74 ENSGT00390000013558.f ENSGT00940000164911 ENSGT00950000182965.a.b.b.a.a.a.b.a.b.a.b ENSGT00390000002034 #16 ENSGT00940000153588.b ENSGT00390000003897.s.b.d.b.a #17 ENSGT00950000182846.a.a.a.a.b ##18 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650.g.b.a #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.C.e.a.b ##22 ENSGT01050000244850.A.a #23 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00940000165180 ENSGT00530000063435.a #28 ENSGT00530000063808.a #29 ENSGT00390000000950.c.a.g ENSGT01030000240148 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00940000160294 ENSGT00940000154783 ENSGT00390000012647 Common wonbat MODERN SPECIES 1065 ENSVURG00010018460 ENSVURG00010018501 ENSVURG00010018504 ENSVURG00010018533 ENSVURG00010018641 ENSVURG00010018644 #16 FLNA (ENSVURG00010018669) ENSVURG00010018760 ENSVURG00010018778 #17 DNASE1L1 (ENSVURG00010018801) #18 TAFAZZIN (ENSVURG00010018809) #19 ENSVURG00010018815 #20 GDI1 (ENSVURG00010018825) #21 ENSVURG00010018834 ##22 PLXNA3 (ENSVURG00010018841) #23 UBL4A (ENSVURG00010018854) #25 SLC10A3 (ENSVURG00010018859) #26 FAM3A (ENSVURG00010018864) #27 ENSVURG00010018900 G6PD (ENSVURG00010019009) #28 IKBKG (ENSVURG00010019077) #29 ENSVURG00010019093 ENSVURG00010019100 GAB3 (ENSVURG00010019104) DKC1 (ENSVURG00010019113) MPP1 (ENSVURG00010019129) F8 (ENSVURG00010019188) FUNDC2 (ENSVURG00010019480) MTCP1 (ENSVURG00010019490) koala MODERN SPECIES 275 ENSPCIG00000034683 ENSPCIG00000001851 ENSPCIG00000022856 ENSPCIG00000022816 ENSPCIG00000010081 #16 FLNA (ENSPCIG00000026358) ENSPCIG00000026904 #17 ENSPCIG00000026917 ##18 ENSPCIG00000026928 #18 ENSPCIG00000026938 TAFAZZIN (ENSPCIG00000026941) #19 ENSPCIG00000026944 #20 GDI1 (ENSPCIG00000026947) #21 ENSPCIG00000027040 ##22 ENSPCIG00000036166 #23 ENSPCIG00000036040 #23 ENSPCIG00000027128 #25 SLC10A3 (ENSPCIG00000027130) #26 FAM3A (ENSPCIG00000027132) #27 ENSPCIG00000009019 G6PD (ENSPCIG00000003610) #28 IKBKG (ENSPCIG00000027137) #29 ENSPCIG00000027140 GAB3 (ENSPCIG00000027141) DKC1 (ENSPCIG00000016706) MPP1 (ENSPCIG00000016705) F8 (ENSPCIG00000029339) FUNDC2 (ENSPCIG00000029338) CMC4 (ENSPCIG00000012830) Wallaby MODERN SPECIES 3653 ATP6AP1 (ENSMEUG00000010901) #20 GDI1 (ENSMEUG00000010921) #21 ENSMEUG00000010934 ##22 Tasmanian devil MODERN SPECIES 21 ENSSHAG00000002186 ENSSHAG00000027640 ENSSHAG00000002700 ENSSHAG00000029755 ENSSHAG00000024707 ENSSHAG00000001750 ENSSHAG00000024989 ENSSHAG00000003040 #16 ENSSHAG00000001055 ENSSHAG00000022273 ##17 ENSSHAG00000004015 ##18 ENSSHAG00000001595 #18 ENSSHAG00000030741 #19 ENSSHAG00000005317 #20 GDI1 (ENSSHAG00000023206) #21 ENSSHAG00000005773 ##22 PLXNA3 (ENSSHAG00000006328) #23 ENSSHAG00000032311 #25 SLC10A3 (ENSSHAG00000027798) #26 FAM3A (ENSSHAG00000021982) #27 G6PD (ENSSHAG00000002307) #28 IKBKG (ENSSHAG00000003200) #29 ENSSHAG00000004297 ENSSHAG00000004769 ENSSHAG00000005407 GAB3 (ENSSHAG00000005588) ENSSHAG00000000766 ENSSHAG00000002463 MPP1 (ENSSHAG00000003104) ENSSHAG00000000596 FUNDC2 (ENSSHAG00000004767) Marsupialia_b ANCESTRAL SPECIES ENSGT00390000004735.C.e.b ##22 Diprotodontia ANCESTRAL SPECIES ENSGT00390000004735.C.e.b ##22 Wallaby MODERN SPECIES 14066 ENSMEUG00000009356 ##22 Tasmanian devil MODERN SPECIES 1 AFF4 (ENSSHAG00000013198) LEAP2 (ENSSHAG00000013151) UQCRQ (ENSSHAG00000027678) GDF9 (ENSSHAG00000012875) SOWAHA (ENSSHAG00000025314) ENSSHAG00000012403 KIF3A (ENSSHAG00000011952) ENSSHAG00000027514 ENSSHAG00000010792 ENSSHAG00000028225 ENSSHAG00000009209 ENSSHAG00000023817 ENSSHAG00000021482 PDLIM4 (ENSSHAG00000005332) ENSSHAG00000027627 ENSSHAG00000029069 ##22 P4HA2 (ENSSHAG00000002885) ENSSHAG00000024165 ENSSHAG00000007755 ENSSHAG00000006580 ENSSHAG00000003849 ENSSHAG00000006253 ENSSHAG00000018710 ENSSHAG00000025310 C5orf15 (ENSSHAG00000023664) VDAC1 (ENSSHAG00000017502) ENSSHAG00000016841 SKP1 (ENSSHAG00000027320) PPP2CA (ENSSHAG00000016632) CDKL3 (ENSSHAG00000016286) ENSSHAG00000023696 Marsupialia_b ANCESTRAL SPECIES 10 ENSGT00940000154811.A ENSGT00940000156350 ENSGT00940000157002 ENSGT00550000074836 ENSGT00940000164060 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00390000004735.C.f ##22 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ENSGT00950000182860.a.a.b ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000158085 Diprotodontia ANCESTRAL SPECIES 41 ENSGT00940000154811.A ENSGT00940000156350 ENSGT00940000157002 ENSGT00550000074836 ENSGT00940000164060 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00390000004735.C.f ##22 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ENSGT00950000182860.a.a.b ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000177290 ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A Diprotodontia_a ANCESTRAL SPECIES 9 ENSGT00940000154811.A ENSGT00940000156350 ENSGT00940000157002 ENSGT00550000074836 ENSGT00940000164060 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00390000004735.C.f ##22 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ENSGT00950000182860.a.a.b ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000177290 ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A Common wonbat MODERN SPECIES 1086 PDSS1 (ENSVURG00010024414) ABI1 (ENSVURG00010024410) ACBD5 (ENSVURG00010024404) MASTL (ENSVURG00010024399) YME1L1 (ENSVURG00010024385) ENSVURG00010024378 ENSVURG00010024374 MKX (ENSVURG00010024370) ODAD2 (ENSVURG00010024367) MPP7 (ENSVURG00010024366) WAC (ENSVURG00010024358) BAMBI (ENSVURG00010024352) MAP3K8 (ENSVURG00010024347) MTPAP (ENSVURG00010024344) ENSVURG00010024343 ENSVURG00010024338 ##22 SVIL (ENSVURG00010024042) ENSVURG00010023999 ZEB1 (ENSVURG00010023993) ARHGAP12 (ENSVURG00010023985) KIF5B (ENSVURG00010023979) EPC1 (ENSVURG00010023973) ITGB1 (ENSVURG00010023964) NRP1 (ENSVURG00010023955) ENSVURG00010023942 ENSVURG00010023939 ENSVURG00010023934 ENSVURG00010023932 CUL2 (ENSVURG00010023920) CREM (ENSVURG00010023893) ENSVURG00010023882 koala MODERN SPECIES 38 ENSPCIG00000034981 ACBD5 (ENSPCIG00000029417) MASTL (ENSPCIG00000029416) YME1L1 (ENSPCIG00000029415) ENSPCIG00000036324 ENSPCIG00000005468 RAB18 (ENSPCIG00000028705) MKX (ENSPCIG00000028704) ODAD2 (ENSPCIG00000028701) MPP7 (ENSPCIG00000028698) WAC (ENSPCIG00000028691) BAMBI (ENSPCIG00000028689) MAP3K8 (ENSPCIG00000018262) MTPAP (ENSPCIG00000018263) ENSPCIG00000036832 ENSPCIG00000017033 ##22 SVIL (ENSPCIG00000017018) ENSPCIG00000032227 ZEB1 (ENSPCIG00000011050) ARHGAP12 (ENSPCIG00000020000) KIF5B (ENSPCIG00000020005) EPC1 (ENSPCIG00000020008) ENSPCIG00000025558 ENSPCIG00000036745 ITGB1 (ENSPCIG00000015501) NRP1 (ENSPCIG00000015535) ENSPCIG00000031890 PARD3 (ENSPCIG00000016072) ENSPCIG00000016086 ENSPCIG00000016087 CUL2 (ENSPCIG00000016089) Tasmanian devil MODERN SPECIES 4 ENSSHAG00000011206 ENSSHAG00000010500 ENSSHAG00000010324 ENSSHAG00000029044 ENSSHAG00000009522 ENSSHAG00000008836 ENSSHAG00000027130 MKX (ENSSHAG00000032197) ODAD2 (ENSSHAG00000013953) MPP7 (ENSSHAG00000012597) WAC (ENSSHAG00000010908) ENSSHAG00000029399 ENSSHAG00000001973 MTPAP (ENSSHAG00000001222) ENSSHAG00000014509 ENSSHAG00000026642 ##22 ENSSHAG00000011750 ENSSHAG00000010691 ZEB1 (ENSSHAG00000005352) ARHGAP12 (ENSSHAG00000007832) KIF5B (ENSSHAG00000006246) EPC1 (ENSSHAG00000001196) ENSSHAG00000023902 ITGB1 (ENSSHAG00000016377) NRP1 (ENSSHAG00000015113) PARD3 (ENSSHAG00000006698) CUL2 (ENSSHAG00000017471) CREM (ENSSHAG00000025076) CCNY (ENSSHAG00000016410) ENSSHAG00000031998 ENSSHAG00000026422 Opossum MODERN SPECIES 2 ENSMODG00000049316 ENSMODG00000000627 PTP4A3 (ENSMODG00000000651) GPR20 (ENSMODG00000024396) ENSMODG00000024398 SLC45A4 (ENSMODG00000000663) ENSMODG00000042019 ENSMODG00000049323 ENSMODG00000038709 ENSMODG00000000707 AGO2 (ENSMODG00000000748) CHRAC1 (ENSMODG00000044477) TRAPPC9 (ENSMODG00000024422) ENSMODG00000024423 KCNK9 (ENSMODG00000000764) ENSMODG00000000768 ##22 FAM135B (ENSMODG00000000885) ENSMODG00000000893 ENSMODG00000048341 ENSMODG00000040118 ENSMODG00000041754 KHDRBS3 (ENSMODG00000000975) ENSMODG00000001054 ZFAT (ENSMODG00000001068) ENSMODG00000047814 ENSMODG00000042414 ST3GAL1 (ENSMODG00000001088) NDRG1 (ENSMODG00000001109) ENSMODG00000001114 SLA (ENSMODG00000001164) TG (ENSMODG00000001154) Actinopterygii ANCESTRAL SPECIES 519 ENSGT00720000108868 ENSGT00940000155472.a.a ENSGT00390000012715 ENSGT00940000159912 ENSGT00390000004735.C ##22 ENSGT01050000244850.A.a #23 Neopterygii ANCESTRAL SPECIES 320 ENSGT00940000164289.a ENSGT00390000006665.b ENSGT00720000108868 ENSGT00940000155472.a.a ENSGT00940000159912 ENSGT00390000004735.C ##22 ENSGT00390000003282.A ENSGT00940000165688 ENSGT00940000159633 ENSGT00940000153231.A Osteoglossocephalai ANCESTRAL SPECIES 350 ENSGT00940000159912 ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00390000012644 ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a Osteoglossiformes ANCESTRAL SPECIES 179 ENSGT00940000157478.a ENSGT00940000166826 ENSGT00390000006988 ENSGT00940000156616.i ENSGT00940000157078 ENSGT00940000158955.f ENSGT00940000159495 ENSGT00990000212353 ENSGT00940000161943 ENSGT00940000163827.a.a.a ENSGT00940000153189.C ENSGT00940000154189.A ENSGT00940000157493.c ENSGT00940000153792.B ENSGT00940000159912 ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00390000003282.A ENSGT00940000165688 ENSGT00940000159633 ENSGT00940000153231.A Asian bonytongue MODERN SPECIES 11 slc6a22.1 (ENSSFOG00015022889) slc6a22.2 (ENSSFOG00015022878) oard1 (ENSSFOG00015022912) APOBEC2 (ENSSFOG00015031718) itpr3 (ENSSFOG00015022955) ELF3 (ENSSFOG00015023079) FRS3 (ENSSFOG00015023093) ENSSFOG00015024624 RAB7B (ENSSFOG00015023104) slc6a11a (ENSSFOG00015023115) ppil1 (ENSSFOG00015023156) ENSSFOG00015027006 celsr2 (ENSSFOG00015023162) sars1 (ENSSFOG00015023183) alas2 (ENSSFOG00015023189) fam50a (ENSSFOG00015023202) ##22 ENSSFOG00015028510 vgll4l (ENSSFOG00015023244) syn1 (ENSSFOG00015027179) araf (ENSSFOG00015023274) imp4 (ENSSFOG00015023293) srpk1a (ENSSFOG00015023299) lhfpl5b (ENSSFOG00015023315) CLPS (ENSSFOG00015023320) cpne5a (ENSSFOG00015023325) ENSSFOG00015027319 ENSSFOG00015027285 zgc:195245 (ENSSFOG00015007448) tmem167b (ENSSFOG00015007434) HSPA2 (ENSSFOG00015027464) ENSSFOG00015013305 P. kingsleyae MODERN SPECIES 1430 fam50a (ENSPKIG00000024368) ##22 Clupeocephala ANCESTRAL SPECIES 259 ENSGT00940000167283.a ENSGT00510000046985.o ENSGT00390000004928 ENSGT00940000159012 ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000156186.k ENSGT00940000171106 ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000153336.a.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.b.a.b ENSGT00940000157877.a ENSGT00990000203541.a.b.a.b ENSGT00940000159659.d.a ENSGT00940000153110.B.e.a ENSGT00940000156977.f Euteleosteomorpha ANCESTRAL SPECIES 44 ENSGT00940000160139 ENSGT00530000063835.a ENSGT00940000158738 ENSGT00940000157198 ENSGT00940000164771.a ENSGT00390000015634 ENSGT00940000153739.a.a ENSGT00940000177261 ENSGT00950000183032.A.b.b.b.a.a ENSGT00940000156364.a.a ENSGT00940000157472 ENSGT00940000167283.a ENSGT00510000046985.o ENSGT00390000004928 ENSGT00940000159012 ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000156186.k ENSGT00940000171106 ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000153336.a.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.b.a.b ENSGT00940000157877.a ENSGT00990000203541.a.b.a.b ENSGT00940000159659.d.a ENSGT00940000153110.B.e.a ENSGT00940000156977.f Acanthomorphata ANCESTRAL SPECIES 104 ENSGT00950000183145.A.b.b ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000156186.k ENSGT00940000171106 ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000159659.d.a ENSGT00940000156977.f ENSGT00950000183042.b.a ENSGT00940000161154.b ENSGT01050000244850.A.b.a.b ##23 Euacanthomorphacea ANCESTRAL SPECIES 2 ENSGT00940000167093 ENSGT00940000156060 ENSGT00940000159085 ENSGT00390000003093 ENSGT00940000167423 ENSGT00990000204792 ENSGT00940000163299.B.b.b.h ENSGT00940000155987.b ENSGT00940000157963 ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000156186.k ENSGT00940000171106 ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a Pinecone sodierfish MODERN SPECIES 21 tnnc2.2 (ENSMMDG00005017826) TNNC2 (ENSMMDG00005017825) ENSMMDG00005017823 ENSMMDG00005006742 lamb2 (ENSMMDG00005006604) USP19 (ENSMMDG00005006417) ENSMMDG00005006399 ENSMMDG00005006397 ENSMMDG00005006393 pim1 (ENSMMDG00005006390) gss (ENSMMDG00005006389) gss (ENSMMDG00005005989) zgc:103759 (ENSMMDG00005005979) ARHGAP4 (ENSMMDG00005005974) #9 cav4b (ENSMMDG00005005970) fam50a (ENSMMDG00005005965) ##22 sars1 (ENSMMDG00005005953) ENSMMDG00005005949 tmem106c (ENSMMDG00005005945) ENSMMDG00005005939 ENSMMDG00005005928 ENSMMDG00005005923 ENSMMDG00005005919 ENSMMDG00005005917 ENSMMDG00005005913 ENSMMDG00005005911 ENSMMDG00005005909 ENSMMDG00005005907 ENSMMDG00005005905 ENSMMDG00005005904 ENSMMDG00005005902 Percomorphaceae ANCESTRAL SPECIES 25 ENSGT00940000167093 ENSGT00940000156060 ENSGT00940000159085 ENSGT00390000003093 ENSGT00940000167423 ENSGT00990000204792 ENSGT00940000163299.B.b.b.h ENSGT00940000155987.b ENSGT00940000157963 ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000156186.k ENSGT00940000171106 ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a Tiger tail seahorse MODERN SPECIES 90 ENSHCOG00000007425 lamb2 (ENSHCOG00000007527) USP19 (ENSHCOG00000007580) ENSHCOG00000007594 ENSHCOG00000007608 ENSHCOG00000007618 pim1 (ENSHCOG00000007630) gss (ENSHCOG00000007655) gss (ENSHCOG00000007665) gss (ENSHCOG00000007688) ENSHCOG00000007702 gss (ENSHCOG00000007722) zgc:103759 (ENSHCOG00000007730) ENSHCOG00000007759 #9 ENSHCOG00000007769 fam50a (ENSHCOG00000007785) ##22 ENSHCOG00000007795 sars1 (ENSHCOG00000007816) ENSHCOG00000007829 ENSHCOG00000007897 tmem106c (ENSHCOG00000007924) krt18a.2 (ENSHCOG00000007931) krt18a.1 (ENSHCOG00000007955) ENSHCOG00000007959 Percomorphaceae_B ANCESTRAL SPECIES 6 ENSGT00940000153541.C.a.a ENSGT00920000149641 ENSGT00940000165924 ENSGT00940000167093 ENSGT00940000156060 ENSGT00940000159085 ENSGT00390000003093 ENSGT00940000167423 ENSGT00940000157963 ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000171106 ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a ENSGT00940000156977.f Ovalentaria ANCESTRAL SPECIES 6 ENSGT00940000153541.C.a.a ENSGT00920000149641 ENSGT00940000165924 ENSGT00940000167093 ENSGT00940000156060 ENSGT00940000159085 ENSGT00390000003093 ENSGT00940000167423 ENSGT00940000157963 ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000156186.k ENSGT00940000171106 ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a Ovalentaria_B ANCESTRAL SPECIES 2 ENSGT00940000153541.C.a.a ENSGT00920000149641 ENSGT00940000165924 ENSGT00940000167093 ENSGT00940000156060 ENSGT00940000159085 ENSGT00390000003093 ENSGT00940000167423 ENSGT00940000157963 ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000156186.k ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a ENSGT00940000156977.f Cichlidae ANCESTRAL SPECIES ENSGT00940000153541.C.a.a ENSGT00920000149641 ENSGT00940000165924 ENSGT00940000167093 ENSGT00940000156060 ENSGT00940000159085 ENSGT00390000003093 ENSGT00940000167423 ENSGT00940000157963 ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000156186.k ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a ENSGT00940000156977.f Pseudocrenilabrinae ANCESTRAL SPECIES 5 ENSGT00920000149641 ENSGT00940000165924 ENSGT00940000167093 ENSGT00940000156060 ENSGT00940000159085 ENSGT00390000003093 ENSGT00940000167423 ENSGT00940000157963 ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000017253 ENSGT00390000013764.`b ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000156186.k ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a ENSGT00940000156977.f Pseudocrenilabrinae_A ANCESTRAL SPECIES 17 ENSGT00920000149641 ENSGT00940000165924 ENSGT00940000167093 ENSGT00940000156060 ENSGT00940000159085 ENSGT00390000003093 ENSGT00940000167423 ENSGT00940000157963 ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000017253 ENSGT00390000013764.`b ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000156186.k ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a ENSGT00940000156977.f Haplochromini ANCESTRAL SPECIES 18 ENSGT00920000149641 ENSGT00940000165924 ENSGT00940000167093 ENSGT00940000156060 ENSGT00940000159085 ENSGT00390000003093 ENSGT00940000167423 ENSGT00940000157963 ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000017253 ENSGT00390000013764.`b ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000156186.k ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a ENSGT00940000156977.f Haplochromini_A ANCESTRAL SPECIES 36 ENSGT00920000149641 ENSGT00940000165924 ENSGT00940000167093 ENSGT00940000156060 ENSGT00940000159085 ENSGT00390000003093 ENSGT00940000167423 ENSGT00940000157963 ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000017253 ENSGT00390000013764.`b ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000156186.k ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a ENSGT00940000156977.f P. nyererei MODERN SPECIES 411 ENSPNYG00000005313 pim1 (ENSPNYG00000005287) MRPL49 (ENSPNYG00000005274) ENSPNYG00000005265 zgc:103759 (ENSPNYG00000005255) ARHGAP4 (ENSPNYG00000005184) #9 fam50a (ENSPNYG00000005141) ##22 ENSPNYG00000005099 sars1 (ENSPNYG00000005062) ENSPNYG00000005027 tmem106c (ENSPNYG00000005018) ENSPNYG00000004954 krt18a.2 (ENSPNYG00000004889) krt18a.1 (ENSPNYG00000004857) krt8 (ENSPNYG00000004346) krt5 (ENSPNYG00000003902) zgc:171775 (ENSPNYG00000003842) ENSPNYG00000003821 ENSPNYG00000003377 ENSPNYG00000003206 LHFPL4 (ENSPNYG00000003196) ENSPNYG00000003116 Haplochromini_B ANCESTRAL SPECIES 57 ENSGT00920000149641 ENSGT00940000165924 ENSGT00940000167093 ENSGT00940000156060 ENSGT00940000159085 ENSGT00390000003093 ENSGT00940000167423 ENSGT00940000157963 ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000017253 ENSGT00390000013764.`b ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000156186.k ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a ENSGT00940000156977.f Eastern happy MODERN SPECIES 12 ENSACLG00000007506 ENSACLG00000007522 lamb2 (ENSACLG00000007558) USP19 (ENSACLG00000007623) ENSACLG00000007653 ENSACLG00000007892 ENSACLG00000008521 ENSACLG00000008664 ENSACLG00000008678 pim1 (ENSACLG00000009026) MRPL49 (ENSACLG00000009050) gss (ENSACLG00000009057) zgc:103759 (ENSACLG00000009116) ARHGAP4 (ENSACLG00000009145) #9 cav4b (ENSACLG00000009185) fam50a (ENSACLG00000009195) ##22 ENSACLG00000009230 sars1 (ENSACLG00000009251) ENSACLG00000009287 tmem106c (ENSACLG00000009307) ENSACLG00000010429 ENSACLG00000010588 ENSACLG00000010592 ENSACLG00000010603 ENSACLG00000010598 krt18a.2 (ENSACLG00000010607) krt18a.1 (ENSACLG00000010623) krt8 (ENSACLG00000010663) krt5 (ENSACLG00000011601) zgc:171775 (ENSACLG00000011620) ENSACLG00000011739 Zebra mbuna MODERN SPECIES 27 ENSMZEG00005012385 pim1 (ENSMZEG00005012371) MRPL49 (ENSMZEG00005012362) gss (ENSMZEG00005012347) zgc:103759 (ENSMZEG00005012332) ARHGAP4 (ENSMZEG00005012290) #9 cav4b (ENSMZEG00005012276) fam50a (ENSMZEG00005012248) ##22 ENSMZEG00005012220 sars1 (ENSMZEG00005012167) ENSMZEG00005012155 tmem106c (ENSMZEG00005012144) ENSMZEG00005012140 ENSMZEG00005012056 krt18a.2 (ENSMZEG00005012034) krt18a.1 (ENSMZEG00005012015) krt8 (ENSMZEG00005012002) Burton s mouthbrooder MODERN SPECIES 698 gss (ENSHBUG00000005546) zgc:103759 (ENSHBUG00000005466) ARHGAP4 (ENSHBUG00000005454) #9 cav4b (ENSHBUG00000005383) fam50a (ENSHBUG00000005362) ##22 ENSHBUG00000005288 sars1 (ENSHBUG00000005264) ENSHBUG00000005236 tmem106c (ENSHBUG00000005225) ENSHBUG00000005195 krt18a.2 (ENSHBUG00000005122) krt18a.1 (ENSHBUG00000005112) krt8 (ENSHBUG00000005097) krt5 (ENSHBUG00000005060) zgc:171775 (ENSHBUG00000005027) ENSHBUG00000004969 ENSHBUG00000004954 Lyretail cichlid MODERN SPECIES 298 ENSNBRG00000017001 zgc:103759 (ENSNBRG00000017012) ARHGAP4 (ENSNBRG00000017028) #9 cav4b (ENSNBRG00000017049) fam50a (ENSNBRG00000017062) ##22 ENSNBRG00000017097 sars1 (ENSNBRG00000017164) ENSNBRG00000017318 ENSNBRG00000017339 ENSNBRG00000017360 krt18a.2 (ENSNBRG00000017708) krt18a.1 (ENSNBRG00000018700) krt8 (ENSNBRG00000018726) krt5 (ENSNBRG00000018744) ENSNBRG00000018755 ENSNBRG00000018768 ENSNBRG00000018805 ENSNBRG00000018905 LHFPL4 (ENSNBRG00000018949) CPNE9 (ENSNBRG00000018988) Nile tilapia MODERN SPECIES 12 TNNC2 (ENSONIG00000001611) ENSONIG00000001605 ENSONIG00000001597 lamb2 (ENSONIG00000001584) USP19 (ENSONIG00000001579) ENSONIG00000031826 ENSONIG00000001578 ENSONIG00000030691 ENSONIG00000028943 pim1 (ENSONIG00000009785) MRPL49 (ENSONIG00000021419) gss (ENSONIG00000033686) zgc:103759 (ENSONIG00000009093) ARHGAP4 (ENSONIG00000009094) #9 cav4b (ENSONIG00000009097) fam50a (ENSONIG00000009098) ##22 ENSONIG00000009099 sars1 (ENSONIG00000009102) ENSONIG00000009105 tmem106c (ENSONIG00000009106) ENSONIG00000009111 krt18a.2 (ENSONIG00000009120) krt18a.1 (ENSONIG00000009122) krt8 (ENSONIG00000009133) krt5 (ENSONIG00000009137) zgc:171775 (ENSONIG00000009142) ENSONIG00000009147 ENSONIG00000009160 LHFPL4 (ENSONIG00000009161) CPNE9 (ENSONIG00000040895) klf15 (ENSONIG00000028140) Midas cichlid MODERN SPECIES 436 ENSACIG00000006322 ENSACIG00000006148 lamb2 (ENSACIG00000006087) USP19 (ENSACIG00000006040) ENSACIG00000006024 ENSACIG00000006001 ENSACIG00000005969 pim1 (ENSACIG00000005947) gss (ENSACIG00000005773) gss (ENSACIG00000005739) zgc:103759 (ENSACIG00000005729) ARHGAP4 (ENSACIG00000005562) #9 cav4b (ENSACIG00000005534) fam50a (ENSACIG00000005503) ##22 ENSACIG00000005480 sars1 (ENSACIG00000005454) Pomacentridae ANCESTRAL SPECIES 211 ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000171106 ENSGT00940000161281 ENSGT00940000163886.B.b.a Pomacentridae_A ANCESTRAL SPECIES 187 ENSGT00940000155170 ENSGT00530000063168.a.a.b ENSGT00950000182989.D.a.a.b ENSGT00940000179006 ENSGT01050000244882.b.c.b.b #8 ENSGT00940000154955.b ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000171106 ENSGT00940000161281 ENSGT00940000163886.B.b.a Amphiprion ANCESTRAL SPECIES 228 ENSGT00940000155170 ENSGT00530000063168.a.a.b ENSGT00950000182989.D.a.a.b ENSGT00940000179006 ENSGT01050000244882.b.c.b.b #8 ENSGT00940000154955.b ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000171106 ENSGT00940000161281 ENSGT00940000163886.B.b.a Orange clownfish MODERN SPECIES 22 sdcbp2 (ENSAPEG00000019212) SNPH (ENSAPEG00000019228) ENSAPEG00000019309 acss2 (ENSAPEG00000020128) ENSAPEG00000020274 acss2 (ENSAPEG00000020619) hsd17b10 (ENSAPEG00000020668) FAM120C (ENSAPEG00000020701) IDH3G (ENSAPEG00000020747) AVPR2 (ENSAPEG00000020796) #8 SLC16A1 (ENSAPEG00000020948) gss (ENSAPEG00000020975) zgc:103759 (ENSAPEG00000021013) ENSAPEG00000021095 #9 cav4b (ENSAPEG00000021132) fam50a (ENSAPEG00000021149) ##22 ENSAPEG00000021199 sars1 (ENSAPEG00000021233) ENSAPEG00000021295 tmem106c (ENSAPEG00000021346) ENSAPEG00000021359 SOX18 (ENSAPEG00000021397) xkr7b (ENSAPEG00000021443) CCM2L (ENSAPEG00000021456) ENSAPEG00000021470 ENSAPEG00000021496 commd7 (ENSAPEG00000021501) dnmt3bb.1 (ENSAPEG00000021522) ENSAPEG00000021552 ENSAPEG00000021568 dnmt3bb.2 (ENSAPEG00000021603) Clown anemonefish MODERN SPECIES 872 gss (ENSAOCG00000018432) zgc:103759 (ENSAOCG00000018450) ENSAOCG00000018499 #9 cav4b (ENSAOCG00000018535) fam50a (ENSAOCG00000018588) ##22 ENSAOCG00000001339 sars1 (ENSAOCG00000018656) ENSAOCG00000018673 tmem106c (ENSAOCG00000018691) ENSAOCG00000018739 Spiny chromis MODERN SPECIES 935 slc16a1b (ENSAPOG00000004262) gss (ENSAPOG00000004218) gss (ENSAPOG00000003961) zgc:103759 (ENSAPOG00000003918) ARHGAP4 (ENSAPOG00000003908) #9 cav4b (ENSAPOG00000003894) fam50a (ENSAPOG00000000081) ##22 Bicolor damselfish MODERN SPECIES 1860 gss (ENSSPAG00000009529) zgc:103759 (ENSSPAG00000009495) ARHGAP4 (ENSSPAG00000009446) #9 cav4b (ENSSPAG00000009437) fam50a (ENSSPAG00000009398) ##22 ENSSPAG00000009378 sars1 (ENSSPAG00000009340) ENSSPAG00000009323 tmem106c (ENSSPAG00000009288) Atherinomorphae ANCESTRAL SPECIES 3 ENSGT00940000153541.C.a.a ENSGT00920000149641 ENSGT00940000165924 ENSGT00940000167093 ENSGT00940000156060 ENSGT00940000159085 ENSGT00390000003093 ENSGT00940000167423 ENSGT00940000157963 ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000156186.k ENSGT00940000168806 ENSGT00940000171106 ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b Cyprinodontiformes ANCESTRAL SPECIES 4 ENSGT00940000153541.C.a.a ENSGT00920000149641 ENSGT00940000165924 ENSGT00940000167093 ENSGT00940000156060 ENSGT00940000159085 ENSGT00390000003093 ENSGT00940000167423 ENSGT00940000157963 ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000156186.k ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a ENSGT00940000156977.f Aplocheiloidei ANCESTRAL SPECIES ENSGT00920000149641 ENSGT00940000165924 ENSGT00940000167093 ENSGT00940000156060 ENSGT00940000159085 ENSGT00390000003093 ENSGT00940000167423 ENSGT00940000155987.b.e.b ENSGT00940000157963 ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000171106 ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a ENSGT00940000156977.f Mangrove rivulus MODERN SPECIES 18 TNNC2 (ENSKMAG00000008710) ENSKMAG00000008696 ENSKMAG00000008681 ENSKMAG00000008602 lamb2 (ENSKMAG00000008549) USP19 (ENSKMAG00000008386) ENSKMAG00000008355 ENSKMAG00000008343 ENSKMAG00000008324 ENSKMAG00000008302 pim1 (ENSKMAG00000008261) gss (ENSKMAG00000008228) zgc:103759 (ENSKMAG00000008208) ARHGAP4 (ENSKMAG00000008180) #9 cav4b (ENSKMAG00000008159) fam50a (ENSKMAG00000008113) ##22 ENSKMAG00000008088 sars1 (ENSKMAG00000008047) ENSKMAG00000008009 tmem106c (ENSKMAG00000007983) ENSKMAG00000007833 krt18a.2 (ENSKMAG00000007787) krt18a.1 (ENSKMAG00000007671) krt8 (ENSKMAG00000007647) krt5 (ENSKMAG00000007561) zgc:171775 (ENSKMAG00000007501) ENSKMAG00000007387 ENSKMAG00000007327 LHFPL4 (ENSKMAG00000007312) CPNE9 (ENSKMAG00000007278) klf15 (ENSKMAG00000007264) Turquoise killifish MODERN SPECIES 1624 ENSNFUG00015012106 USP19 (ENSNFUG00015011430) SI (ENSNFUG00015011351) ENSNFUG00015011345 ENSNFUG00015011341 ENSNFUG00015011332 ENSNFUG00015011312 ENSNFUG00015011304 PIM1 (ENSNFUG00015011265) ENSNFUG00015011247 gss (ENSNFUG00015010765) zgc:103759 (ENSNFUG00015010712) ARHGAP4 (ENSNFUG00015010700) #9 ENSNFUG00015010695 ENSNFUG00015010268 fam50a (ENSNFUG00015009551) ##22 SARS (ENSNFUG00015009461) ENSNFUG00015025138 tmem106c (ENSNFUG00015025134) ENSNFUG00015025123 KRT18 (ENSNFUG00015025107) ENSNFUG00015025103 krt5 (ENSNFUG00015025064) zgc:171775 (ENSNFUG00015024994) ENSNFUG00015024909 LHFPL4 (ENSNFUG00015024894) ENSNFUG00015024892 ENSNFUG00015024820 klf15 (ENSNFUG00015024786) ENSNFUG00015024735 CHST13 (ENSNFUG00015024699) Cyprinodontoidei ANCESTRAL SPECIES 3 ENSGT00920000149641 ENSGT00940000165924 ENSGT00940000167093 ENSGT00940000156060 ENSGT00940000159085 ENSGT00390000003093 ENSGT00940000167423 ENSGT00940000155987.b.f ENSGT00940000157963 ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000156186.k ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a.i ENSGT00940000161090.B.c.a.a.j ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a Poeciliinae ANCESTRAL SPECIES 2 ENSGT00920000149641 ENSGT00940000165924 ENSGT00940000167093 ENSGT00940000156060 ENSGT00940000159085 ENSGT00390000003093 ENSGT00940000167423 ENSGT00940000155987.b.f ENSGT00940000157963 ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000156186.k ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a.i ENSGT00940000161090.B.c.a.a.j ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a Poecilia ANCESTRAL SPECIES 26 ENSGT00940000153541.C.a.a ENSGT00920000149641 ENSGT00940000165924 ENSGT00940000167093 ENSGT00940000156060 ENSGT00940000159085 ENSGT00390000003093 ENSGT00940000167423 ENSGT00940000166696 ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000156186.k ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a.i ENSGT00940000161090.B.c.a.a.j ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT01020000230394.e.a.a.b.a.a.b.a.b.tb ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a NAME_6 ANCESTRAL SPECIES 107 ENSGT00940000165924 ENSGT00920000149641.c ENSGT00940000167093 ENSGT00940000156060.cd ENSGT00940000156060.bd.b ENSGT00940000159085 ENSGT00390000003093 ENSGT00940000167423 ENSGT00940000166696 ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000156186.k ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a.i ENSGT00940000161090.B.c.a.a.j ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT01020000230394.e.a.a.b.a.a.b.a.b.tb ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a Sailfin molly MODERN SPECIES 262 ENSPLAG00000003939 pim1 (ENSPLAG00000003933) gss (ENSPLAG00000003918) zgc:103759 (ENSPLAG00000003891) ARHGAP4 (ENSPLAG00000003861) #9 cav4b (ENSPLAG00000003775) fam50a (ENSPLAG00000003742) ##22 ENSPLAG00000003720 sars1 (ENSPLAG00000003701) ENSPLAG00000003686 tmem106c (ENSPLAG00000003665) ENSPLAG00000003600 Amazon molly MODERN SPECIES 528 ENSPFOG00000022175 ENSPFOG00000019449 lamb2 (ENSPFOG00000019460) USP19 (ENSPFOG00000019469) ENSPFOG00000019479 ENSPFOG00000019482 ENSPFOG00000019483 ENSPFOG00000023200 ENSPFOG00000019485 ENSPFOG00000019492 pim1 (ENSPFOG00000019499) gss (ENSPFOG00000019503) zgc:103759 (ENSPFOG00000019511) ARHGAP4 (ENSPFOG00000019520) #9 cav4b (ENSPFOG00000019523) fam50a (ENSPFOG00000019526) ##22 ENSPFOG00000019528 Guppy MODERN SPECIES 459 USP19 (ENSPREG00000003678) ENSPREG00000003647 ENSPREG00000003636 ENSPREG00000003611 ENSPREG00000003595 ENSPREG00000003579 ENSPREG00000003570 ENSPREG00000003547 pim1 (ENSPREG00000003525) ENSPREG00000003521 gss (ENSPREG00000003479) ENSPREG00000003255 zgc:103759 (ENSPREG00000003231) ARHGAP4 (ENSPREG00000003195) #9 cav4b (ENSPREG00000003174) fam50a (ENSPREG00000003148) ##22 ENSPREG00000003133 sars1 (ENSPREG00000003083) ENSPREG00000003067 ENSPREG00000003038 ENSPREG00000002963 krt18a.2 (ENSPREG00000002930) krt18a.1 (ENSPREG00000002921) krt8 (ENSPREG00000002896) krt5 (ENSPREG00000002360) zgc:171775 (ENSPREG00000002232) ENSPREG00000002152 ENSPREG00000002106 ENSPREG00000002082 LHFPL4 (ENSPREG00000002067) CPNE9 (ENSPREG00000001995) Platyfish MODERN SPECIES ENSXMAG00000016516 lamb2 (ENSXMAG00000016442) USP19 (ENSXMAG00000016414) ENSXMAG00000030095 ENSXMAG00000020962 ENSXMAG00000016409 ENSXMAG00000025836 ENSXMAG00000028759 ENSXMAG00000027187 ENSXMAG00000026776 pim1 (ENSXMAG00000021393) gss (ENSXMAG00000016356) zgc:103759 (ENSXMAG00000016353) ARHGAP4 (ENSXMAG00000016317) #9 cav4b (ENSXMAG00000016311) fam50a (ENSXMAG00000023736) ##22 ENSXMAG00000029856 sars1 (ENSXMAG00000016138) ENSXMAG00000016305 tmem106c (ENSXMAG00000027733) ENSXMAG00000026206 krt18a.2 (ENSXMAG00000016246) krt18a.1 (ENSXMAG00000026726) krt5 (ENSXMAG00000023820) zgc:171775 (ENSXMAG00000001076) ENSXMAG00000001131 ENSXMAG00000001270 LHFPL4 (ENSXMAG00000001273) CPNE9 (ENSXMAG00000028169) klf15 (ENSXMAG00000027140) ENSXMAG00000001327 NAME_4 ANCESTRAL SPECIES 205 ENSGT00940000153394.c.a ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000156186.k ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a.i ENSGT00940000161090.B.c.a.a.j ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a ENSGT00940000156977.f Mummichog MODERN SPECIES 347 pim1 (ENSFHEG00000015016) gss (ENSFHEG00000014988) zgc:103759 (ENSFHEG00000014901) ARHGAP4 (ENSFHEG00000014874) #9 fam50a (ENSFHEG00000014838) ##22 ENSFHEG00000014804 sars1 (ENSFHEG00000014797) ENSFHEG00000014757 tmem106c (ENSFHEG00000014720) ENSFHEG00000014703 krt18a.2 (ENSFHEG00000014654) krt18a.1 (ENSFHEG00000014646) Sheepshead minnow MODERN SPECIES 334 gss (ENSCVAG00000018389) zgc:103759 (ENSCVAG00000018406) ENSCVAG00000018439 #9 fam50a (ENSCVAG00000018500) ##22 ENSCVAG00000018514 sars1 (ENSCVAG00000018550) ENSCVAG00000018567 tmem106c (ENSCVAG00000018596) ENSCVAG00000018663 krt18a.2 (ENSCVAG00000018680) krt18a.1 (ENSCVAG00000018690) krt8 (ENSCVAG00000018700) krt8 (ENSCVAG00000018923) krt5 (ENSCVAG00000018969) zgc:171775 (ENSCVAG00000019041) fbxl4 (ENSCVAG00000019069) pou3f2b (ENSCVAG00000019075) ENSCVAG00000019078 mms22l (ENSCVAG00000019148) Oryzias ANCESTRAL SPECIES 4 ENSGT00940000153541.C.a.a ENSGT00920000149641 ENSGT00940000165924 ENSGT00940000167093.c ENSGT00940000156060 ENSGT00940000159085.j ENSGT00390000003093 ENSGT00940000167423 ENSGT00940000157963.o.a ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000171106 ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a ENSGT00940000156977.f Oryzias_b DUPLICATION Oryzias_b ANCESTRAL SPECIES 2 ENSGT00940000153541.C.a.a ENSGT00940000165924 ENSGT00940000167093.d ENSGT00940000167093.c ENSGT00940000156060 ENSGT00940000159085.j ENSGT00390000003093 ENSGT00940000167423 ENSGT00940000157963.o.a ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C.g ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000171106 ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000161090.B.c.b.a.a.a.m ENSGT00940000166426 ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a ENSGT00940000156977.f ENSGT00950000183042.b.a Indian medaka MODERN SPECIES 269 ENSOMEG00000023375 ##22 Javanese ricefish MODERN SPECIES 21 ENSOJAG00000023022 ENSOJAG00000023020 ENSOJAG00000022697 lamb2 (ENSOJAG00000021744) USP19 (ENSOJAG00000021704) ENSOJAG00000021697 ENSOJAG00000021682 ENSOJAG00000021664 ENSOJAG00000021642 ENSOJAG00000021628 pim1 (ENSOJAG00000021597) gss (ENSOJAG00000021554) zgc:103759 (ENSOJAG00000021543) ARHGAP4 (ENSOJAG00000021471) #9 cav4b (ENSOJAG00000021464) fam50a (ENSOJAG00000021434) ##22 ENSOJAG00000021424 ENSOJAG00000021417 sars1 (ENSOJAG00000021396) ENSOJAG00000021389 tmem106c (ENSOJAG00000021384) ENSOJAG00000021381 krt18a.2 (ENSOJAG00000021376) krt18a.1 (ENSOJAG00000021370) krt5 (ENSOJAG00000021361) krt5 (ENSOJAG00000021231) zgc:171775 (ENSOJAG00000021080) ENSOJAG00000020145 LHFPL4 (ENSOJAG00000020100) CPNE9 (ENSOJAG00000019934) klf15 (ENSOJAG00000019903) Oryzias_b ANCESTRAL SPECIES ENSGT00390000004735.C.h ##22 Indian medaka MODERN SPECIES 23 ENSOMEG00000012451 lamb2 (ENSOMEG00000012499) ENSOMEG00000000316 USP19 (ENSOMEG00000012597) ENSOMEG00000012635 ENSOMEG00000012648 ENSOMEG00000012681 ENSOMEG00000000325 ENSOMEG00000012819 pim1 (ENSOMEG00000012860) gss (ENSOMEG00000012881) ENSOMEG00000012889 zgc:103759 (ENSOMEG00000012912) ARHGAP4 (ENSOMEG00000013006) #9 ENSOMEG00000013030 fam50a (ENSOMEG00000013066) ##22 ENSOMEG00000013104 sars1 (ENSOMEG00000013121) ENSOMEG00000013155 tmem106c (ENSOMEG00000013187) ENSOMEG00000013256 krt18a.2 (ENSOMEG00000013289) krt18a.1 (ENSOMEG00000013343) krt8 (ENSOMEG00000013377) krt5 (ENSOMEG00000000337) ENSOMEG00000013442 ENSOMEG00000013457 ENSOMEG00000013537 ENSOMEG00000013579 ENSOMEG00000013604 LHFPL4 (ENSOMEG00000013621) Oryzias_a ANCESTRAL SPECIES ENSGT00940000165924 ENSGT00940000167093.c ENSGT00940000156060 ENSGT00940000159085.j ENSGT00390000003093 ENSGT00940000167423 ENSGT00940000157963.o.b ENSGT00940000166696 ENSGT00940000157963.o.a ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000171106 ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000161090.B.c.b.a.a.a.o.a ENSGT00940000166426 ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a ENSGT00940000156977.f ENSGT00950000183042.b.a Japanese Medaka HdrR MODERN SPECIES 21 ENSORLG00000001750 ENSORLG00000001709 lamb2 (ENSORLG00000028202) USP19 (ENSORLG00000001685) ENSORLG00000026988 ENSORLG00000028314 ENSORLG00000027819 ENSORLG00000029735 ENSORLG00000026909 ENSORLG00000001660 pim1 (ENSORLG00000001653) gss (ENSORLG00000001633) zgc:103759 (ENSORLG00000001613) ENSORLG00000001598 #9 cav4b (ENSORLG00000024542) fam50a (ENSORLG00000001578) ##22 ENSORLG00000001557 sars1 (ENSORLG00000001547) ENSORLG00000001527 tmem106c (ENSORLG00000001519) ENSORLG00000001505 krt18a.2 (ENSORLG00000001491) krt18a.1 (ENSORLG00000001481) krt8 (ENSORLG00000001392) ENSORLG00000027527 krt5 (ENSORLG00000001350) zgc:171775 (ENSORLG00000018802) ENSORLG00000025470 ENSORLG00000001300 ENSORLG00000001246 ENSORLG00000027153 Chinese medaka MODERN SPECIES 230 taf13 (ENSOSIG00000015052) tnnc2.2 (ENSOSIG00000015050) TNNC2 (ENSOSIG00000015048) ENSOSIG00000015047 ENSOSIG00000015045 ENSOSIG00000014427 ENSOSIG00000014142 ENSOSIG00000014138 ENSOSIG00000014134 ENSOSIG00000014130 pim1 (ENSOSIG00000014123) gss (ENSOSIG00000014104) zgc:103759 (ENSOSIG00000014096) ARHGAP4 (ENSOSIG00000011592) #9 cav4b (ENSOSIG00000011561) fam50a (ENSOSIG00000011555) ##22 ENSOSIG00000011543 sars1 (ENSOSIG00000010955) ENSOSIG00000010954 tmem106c (ENSOSIG00000010953) ENSOSIG00000010952 krt18a.2 (ENSOSIG00000010950) krt18a.1 (ENSOSIG00000010948) krt8 (ENSOSIG00000010907) Percomorphaceae_C ANCESTRAL SPECIES 4 ENSGT00940000153541.C.a.a ENSGT00920000149641 ENSGT00940000165924 ENSGT00940000167093 ENSGT00940000156060 ENSGT00940000159085 ENSGT00390000003093 ENSGT00940000167423 ENSGT00940000157963 ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000171106 ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a ENSGT00940000156977.f ENSGT00950000183042.b.a Percomorphaceae_D ANCESTRAL SPECIES 4 ENSGT00940000153541.C.a.a ENSGT00920000149641 ENSGT00940000165924 ENSGT00940000167093 ENSGT00940000156060 ENSGT00940000159085 ENSGT00390000003093 ENSGT00940000167423 ENSGT00940000157963 ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000171106 ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a ENSGT00940000156977.f ENSGT00950000183042.b.a Anabantaria ANCESTRAL SPECIES 3 ENSGT00940000153541.C.a.b ENSGT00940000153541.C.a.a ENSGT00940000165924 ENSGT00940000167093 ENSGT00940000156060 ENSGT00940000159085 ENSGT00390000003093 ENSGT00940000167423 ENSGT00940000157963 ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000156186.k ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a ENSGT00940000156977.f ENSGT00950000183042.b.a Anabantoidei ANCESTRAL SPECIES 2 ENSGT00940000153541.C.a.b ENSGT00940000153541.C.a.a ENSGT00940000165924 ENSGT00940000167093 ENSGT00940000156060 ENSGT00940000159085 ENSGT00390000003093 ENSGT00940000167423 ENSGT00940000163299.A.b.c.a ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000156186.k ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a ENSGT00940000156977.f ENSGT00950000183042.b.a ENSGT00940000161154.b Climbing perch MODERN SPECIES 20 tnnc2.2 (ENSATEG00000001118) ENSATEG00000001128 ENSATEG00000001162 ENSATEG00000001314 lamb2 (ENSATEG00000001347) ENSATEG00000001547 ENSATEG00000001683 ENSATEG00000001694 ENSATEG00000001701 ENSATEG00000001713 ENSATEG00000001736 ENSATEG00000001928 ENSATEG00000025225 ENSATEG00000001995 #9 ENSATEG00000002012 fam50a (ENSATEG00000002029) ##22 ENSATEG00000002076 sars1 (ENSATEG00000002081) ENSATEG00000002123 ENSATEG00000002150 ENSATEG00000002160 krt18a.2 (ENSATEG00000002186) krt18a.1 (ENSATEG00000002242) krt5 (ENSATEG00000002256) zgc:171775 (ENSATEG00000002318) ENSATEG00000002374 ENSATEG00000002398 ENSATEG00000002412 ENSATEG00000002434 klf15 (ENSATEG00000002758) ENSATEG00000025408 Siamese fighting fish MODERN SPECIES 18 taf13 (ENSBSLG00000020873) tnnc2.2 (ENSBSLG00000020871) TNNC2 (ENSBSLG00000020870) ENSBSLG00000020867 ENSBSLG00000020717 USP19 (ENSBSLG00000018523) ENSBSLG00000018411 ENSBSLG00000018399 ENSBSLG00000018373 ENSBSLG00000018343 pim1 (ENSBSLG00000018310) gss (ENSBSLG00000018121) zgc:103759 (ENSBSLG00000018112) ARHGAP4 (ENSBSLG00000017985) #9 cav4b (ENSBSLG00000017975) fam50a (ENSBSLG00000017824) ##22 ENSBSLG00000017784 sars1 (ENSBSLG00000017685) ENSBSLG00000017663 tmem106c (ENSBSLG00000017651) ENSBSLG00000017506 krt18a.2 (ENSBSLG00000017451) krt18a.1 (ENSBSLG00000017433) krt5 (ENSBSLG00000016796) ENSBSLG00000016012 ENSBSLG00000016005 ENSBSLG00000016002 zgc:171775 (ENSBSLG00000015907) ENSBSLG00000014880 ENSBSLG00000014820 LHFPL4 (ENSBSLG00000014815) Zig-zag eel MODERN SPECIES 21 ENSMAMG00000027236 ENSMAMG00000016901 ENSMAMG00000017025 lamb2 (ENSMAMG00000017038) ENSMAMG00000017077 ENSMAMG00000017100 ENSMAMG00000017102 ENSMAMG00000017114 ENSMAMG00000026293 ENSMAMG00000000411 ENSMAMG00000000458 ENSMAMG00000024279 ENSMAMG00000026517 ENSMAMG00000000525 #9 ENSMAMG00000000557 ENSMAMG00000000568 ##22 ENSMAMG00000000638 ENSMAMG00000000690 ENSMAMG00000000710 ENSMAMG00000000750 krt18a.2 (ENSMAMG00000001814) krt18a.1 (ENSMAMG00000000915) krt8 (ENSMAMG00000007205) zgc:171775 (ENSMAMG00000007229) ENSMAMG00000007272 ENSMAMG00000007342 ENSMAMG00000007381 ENSMAMG00000007416 klf15 (ENSMAMG00000007458) ENSMAMG00000007477 ENSMAMG00000007539 Carangaria ANCESTRAL SPECIES 2 ENSGT00940000153541.C.a.a ENSGT00920000149641 ENSGT00940000165924 ENSGT00940000167093 ENSGT00940000156060 ENSGT00940000159085 ENSGT00390000003093 ENSGT00940000167423 ENSGT00940000157963 ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000171106 ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a ENSGT00940000156977.f ENSGT00950000183042.b.a Carangaria_A ANCESTRAL SPECIES 1 ENSGT00940000153394.c.a ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000171106 ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a ENSGT00940000156977.f ENSGT00950000183042.b.a Seriola ANCESTRAL SPECIES 136 ENSGT00940000153394.c.a ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000171106 ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a ENSGT00940000156977.f ENSGT00950000183042.b.a Yellowtail amberjack MODERN SPECIES 2636 pim1 (ENSSLDG00000010280) gss (ENSSLDG00000010339) gss (ENSSLDG00000010490) zgc:103759 (ENSSLDG00000010549) ARHGAP4 (ENSSLDG00000010583) #9 cav4b (ENSSLDG00000010637) fam50a (ENSSLDG00000010654) ##22 ENSSLDG00000010695 sars1 (ENSSLDG00000010724) ENSSLDG00000010760 tmem106c (ENSSLDG00000010790) ENSSLDG00000010844 krt18a.2 (ENSSLDG00000010946) krt18a.1 (ENSSLDG00000010962) krt8 (ENSSLDG00000010979) krt5 (ENSSLDG00000010992) zgc:171775 (ENSSLDG00000011019) ENSSLDG00000011134 ENSSLDG00000011557 Greater amberjack MODERN SPECIES 97 pim1 (ENSSDUG00000017257) gss (ENSSDUG00000017238) gss (ENSSDUG00000017217) zgc:103759 (ENSSDUG00000017203) ENSSDUG00000017165 #9 cav4b (ENSSDUG00000017154) fam50a (ENSSDUG00000017126) ##22 ENSSDUG00000017110 sars1 (ENSSDUG00000017088) ENSSDUG00000017075 tmem106c (ENSSDUG00000017059) ENSSDUG00000016926 krt18a.2 (ENSSDUG00000016894) krt18a.1 (ENSSDUG00000016874) krt8 (ENSSDUG00000016844) BSN (ENSSDUG00000016766) RAD54L2 (ENSSDUG00000016711) tmem115 (ENSSDUG00000016690) ENSSDUG00000016672 sema3h (ENSSDUG00000016567) ENSSDUG00000016549 borcs6 (ENSSDUG00000016539) Barramundi perch MODERN SPECIES 62 pim1 (ENSLCAG00010010663) gss (ENSLCAG00010010656) gss (ENSLCAG00010010608) zgc:103759 (ENSLCAG00010010595) ARHGAP4 (ENSLCAG00010010586) #9 ENSLCAG00010010582 fam50a (ENSLCAG00010010569) ##22 ENSLCAG00010010562 sars1 (ENSLCAG00010010547) ENSLCAG00010010539 ENSLCAG00010010538 ENSLCAG00010010478 krt18a.2 (ENSLCAG00010010457) krt18a.1 (ENSLCAG00010010443) krt5 (ENSLCAG00010010420) zgc:171775 (ENSLCAG00010010412) ENSLCAG00010010223 ENSLCAG00010010179 LHFPL4 (ENSLCAG00010010173) CPNE9 (ENSLCAG00010010055) klf15 (ENSLCAG00010009989) ENSLCAG00010009919 Pleuronectoidei ANCESTRAL SPECIES 14 ENSGT00940000153541.C.a.a ENSGT00920000149641 ENSGT00940000165924 ENSGT00940000167093 ENSGT00940000156060 ENSGT00940000159085 ENSGT00390000003093 ENSGT00940000167423 ENSGT00940000157963 ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000171106 ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a ENSGT00940000156977.f ENSGT00950000183042.b.a ENSGT00940000161154.b Tongue sole MODERN SPECIES 1 ENSCSEG00000000738 ENSCSEG00000000762 tnnt2a (ENSCSEG00000000775) TEAD3 (ENSCSEG00000000878) ENSCSEG00000001085 ENSCSEG00000001090 ENSCSEG00000001096 pim1 (ENSCSEG00000001104) TCTE1 (ENSCSEG00000001107) tbpl1 (ENSCSEG00000001115) gss (ENSCSEG00000001125) zgc:103759 (ENSCSEG00000001153) ARHGAP4 (ENSCSEG00000001164) #9 ENSCSEG00000001235 ENSCSEG00000001240 fam50a (ENSCSEG00000001241) ##22 ptges3a (ENSCSEG00000001251) dtx3 (ENSCSEG00000001255) rnd1b (ENSCSEG00000001268) CACNB3 (ENSCSEG00000001270) ADCY6 (ENSCSEG00000001277) galnt6 (ENSCSEG00000001291) zgc:158263 (ENSCSEG00000001313) naa10 (ENSCSEG00000001327) #10 arhgap4a (ENSCSEG00000001389) #9 ssr4 (ENSCSEG00000001399) AVPR2 (ENSCSEG00000001404) #8 idh3g (ENSCSEG00000001409) fam3a (ENSCSEG00000001428) #27 ENSCSEG00000001434 ENSCSEG00000001437 Turbot MODERN SPECIES 2 lamb2 (ENSSMAG00000004069) ENSSMAG00000004194 ENSSMAG00000021665 ENSSMAG00000004387 ENSSMAG00000004413 ENSSMAG00000004432 ENSSMAG00000004449 ENSSMAG00000004588 ENSSMAG00000036809 ENSSMAG00000036716 ENSSMAG00000037690 ENSSMAG00000004467 ENSSMAG00000004611 ENSSMAG00000004634 #9 ENSSMAG00000004761 fam50a (ENSSMAG00000004771) ##22 ENSSMAG00000004845 sars1 (ENSSMAG00000004870) ENSSMAG00000004925 ENSSMAG00000004965 ENSSMAG00000004986 krt18a.2 (ENSSMAG00000005150) krt18a.1 (ENSSMAG00000005162) krt8 (ENSSMAG00000005202) krt5 (ENSSMAG00000022420) krt5 (ENSSMAG00000005231) krt5 (ENSSMAG00000031902) zgc:171775 (ENSSMAG00000005661) ENSSMAG00000005696 ENSSMAG00000005774 ENSSMAG00000005785 Eupercaria ANCESTRAL SPECIES 4 ENSGT00940000153541.C.a.b ENSGT00940000153541.C.a.a ENSGT00940000165924 ENSGT00940000167093 ENSGT00940000156060 ENSGT00940000159085 ENSGT00390000003093 ENSGT00940000167423 ENSGT00940000157963 ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000171106 ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a ENSGT00940000156977.f ENSGT00950000183042.b.a Tetraodontidae ANCESTRAL SPECIES ENSGT00390000004735.C ##22 Fugu MODERN SPECIES 15 renbp (ENSTRUG00000009621) ndufb11 (ENSTRUG00000026600) cdk20 (ENSTRUG00000009502) tpx2 (ENSTRUG00000009240) plod1 (ENSTRUG00000008466) icmt (ENSTRUG00000008357) si:dkeyp-104h9.5 (ENSTRUG00000008296) phc2a (ENSTRUG00000008232) ENSTRUG00000025131 NTSR1 (ENSTRUG00000008186) nsfl1c (ENSTRUG00000007860) sdcbp2 (ENSTRUG00000007644) ENSTRUG00000027280 sars1 (ENSTRUG00000007166) ENSTRUG00000020207 fam50a (ENSTRUG00000006877) ##22 ARHGAP4 (ENSTRUG00000006232) #9 zgc:103759 (ENSTRUG00000006215) gss (ENSTRUG00000005800) ENSTRUG00000021910 pim1 (ENSTRUG00000005490) ENSTRUG00000005431 ENSTRUG00000024517 ENSTRUG00000005231 ENSTRUG00000030628 ENSTRUG00000023351 USP19 (ENSTRUG00000004736) lamb2 (ENSTRUG00000002301) ENSTRUG00000001981 ENSTRUG00000003492 ENSTRUG00000028188 Tetraodon MODERN SPECIES 26 ENSTNIG00000000560 cbln1 (ENSTNIG00000004979) AFAP1 (ENSTNIG00000004980) plagl2 (ENSTNIG00000004990) tm9sf4 (ENSTNIG00000004991) ilf2 (ENSTNIG00000005002) ENSTNIG00000005003 polr1h (ENSTNIG00000005004) ilf2 (ENSTNIG00000005005) pex11b (ENSTNIG00000005006) smad10a (ENSTNIG00000005007) snapin (ENSTNIG00000000912) chtopa (ENSTNIG00000005008) txnipa (ENSTNIG00000005009) gatad2b (ENSTNIG00000002290) fam50a (ENSTNIG00000005010) ##22 ARHGAP4 (ENSTNIG00000005011) #9 pou3f1 (ENSTNIG00000005012) ENSTNIG00000001165 ENSTNIG00000005015 hoxb8a (ENSTNIG00000005016) ENSTNIG00000000934 ENSTNIG00000005017 ethe1 (ENSTNIG00000005018) ethe1 (ENSTNIG00000005019) psmd13 (ENSTNIG00000005024) ENSTNIG00000001214 derl2 (ENSTNIG00000005031) derl2 (ENSTNIG00000005032) smarcb1b (ENSTNIG00000005033) c7b (ENSTNIG00000005034) Eupecaria_A ANCESTRAL SPECIES 4 ENSGT00940000153541.C.a.b ENSGT00940000153541.C.a.a ENSGT00940000165924 ENSGT00940000167093 ENSGT00940000156060 ENSGT00940000159085 ENSGT00390000003093 ENSGT00940000167423 ENSGT00940000157963 ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000171106 ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a ENSGT00940000156977.f ENSGT00950000183042.b.a Ballan wrasse MODERN SPECIES 77 fkbp1ab (ENSLBEG00000020566) sdcbp2 (ENSLBEG00000020459) SNPH (ENSLBEG00000020417) ENSLBEG00000020337 lamb2 (ENSLBEG00000020210) USP19 (ENSLBEG00000020050) ENSLBEG00000019979 ENSLBEG00000019955 ENSLBEG00000019885 ENSLBEG00000019851 pim1 (ENSLBEG00000019813) gss (ENSLBEG00000019758) zgc:103759 (ENSLBEG00000019727) ARHGAP4 (ENSLBEG00000019647) #9 cav4b (ENSLBEG00000019612) fam50a (ENSLBEG00000019556) ##22 ENSLBEG00000019516 sars1 (ENSLBEG00000019469) ENSLBEG00000019451 tmem106c (ENSLBEG00000019417) ENSLBEG00000019259 mad2l2 (ENSLBEG00000019212) tmem82 (ENSLBEG00000019183) ENSLBEG00000019151 SPEN (ENSLBEG00000019129) ENSLBEG00000019041 SLC25A45 (ENSLBEG00000019011) fam131c (ENSLBEG00000018984) clcnk (ENSLBEG00000018926) hspb7 (ENSLBEG00000018897) ZBTB17 (ENSLBEG00000018870) Eupecaria_B ANCESTRAL SPECIES 5 ENSGT00940000153541.C.a.b ENSGT00940000153541.C.a.a ENSGT00940000165924 ENSGT00940000167093 ENSGT00940000156060 ENSGT00940000159085 ENSGT00390000003093 ENSGT00940000167423 ENSGT00940000157963 ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000171106 ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a ENSGT00940000156977.f ENSGT00950000183042.b.a Eupecaria_C ANCESTRAL SPECIES 5 ENSGT00940000153541.C.a.b ENSGT00940000153541.C.a.a ENSGT00940000165924 ENSGT00940000167093 ENSGT00940000156060 ENSGT00940000159085 ENSGT00390000003093 ENSGT00940000167423 ENSGT00940000157963 ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000171106 ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a ENSGT00940000156977.f ENSGT00950000183042.b.a ENSGT00940000161154.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 20 ENSGT00940000153541.C.a.b ENSGT00940000153541.C.a.a ENSGT00940000165924 ENSGT00940000167093 ENSGT00940000156060 ENSGT00940000159085 ENSGT00390000003093 ENSGT00940000167423 ENSGT00940000157963 ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000156186.k ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a ENSGT00940000156977.f ENSGT00950000183042.b.a ENSGT00940000161154.b Large yellow croaker MODERN SPECIES 487 ENSLCRG00005023656 lamb2 (ENSLCRG00005023414) USP19 (ENSLCRG00005023008) ENSLCRG00005022994 ENSLCRG00005022993 ENSLCRG00005022990 ENSLCRG00005022989 pim1 (ENSLCRG00005022988) ENSLCRG00005022979 ENSLCRG00005022977 gss (ENSLCRG00005022974) gss (ENSLCRG00005022913) zgc:103759 (ENSLCRG00005022899) ARHGAP4 (ENSLCRG00005022897) #9 cav4b (ENSLCRG00005022894) fam50a (ENSLCRG00005022891) ##22 ENSLCRG00005022890 sars1 (ENSLCRG00005022887) ENSLCRG00005022886 tmem106c (ENSLCRG00005022884) ENSLCRG00005022876 krt18a.2 (ENSLCRG00005022875) krt18a.1 (ENSLCRG00005022874) krt5 (ENSLCRG00005022870) zgc:171775 (ENSLCRG00005022867) ENSLCRG00005022156 ENSLCRG00005022114 ENSLCRG00005022113 LHFPL4 (ENSLCRG00005022112) CPNE9 (ENSLCRG00005022106) klf15 (ENSLCRG00005022104) European seabass MODERN SPECIES 14 taf13 (ENSDLAG00005018587) tnnc2.2 (ENSDLAG00005018570) ENSDLAG00005018564 ENSDLAG00005018516 ENSDLAG00005017393 lamb2 (ENSDLAG00005015097) ENSDLAG00005012381 ENSDLAG00005030081 ENSDLAG00005032818 ENSDLAG00005012265 ENSDLAG00005012255 pim1 (ENSDLAG00005012233) ENSDLAG00005012020 ENSDLAG00005028621 ENSDLAG00005011887 #9 fam50a (ENSDLAG00005027522) ##22 ENSDLAG00005032227 sars1 (ENSDLAG00005011775) ENSDLAG00005011764 ENSDLAG00005010911 krt18a.2 (ENSDLAG00005010873) krt18a.1 (ENSDLAG00005010859) krt5 (ENSDLAG00005010631) zgc:171775 (ENSDLAG00005010577) ENSDLAG00005009150 ENSDLAG00005031341 ENSDLAG00005028440 ENSDLAG00005009092 klf15 (ENSDLAG00005009091) ENSDLAG00005009086 ENSDLAG00005008839 Gilthead seabream MODERN SPECIES 21 ENSSAUG00010017372 ENSSAUG00010017123 lamb2 (ENSSAUG00010010651) USP19 (ENSSAUG00010005997) ENSSAUG00010005923 ENSSAUG00010005921 ENSSAUG00010005918 ENSSAUG00010005905 pim1 (ENSSAUG00010005904) ENSSAUG00010005902 gss (ENSSAUG00010005886) gss (ENSSAUG00010004984) zgc:103759 (ENSSAUG00010004964) ARHGAP4 (ENSSAUG00010004950) #9 cav4b (ENSSAUG00010004940) fam50a (ENSSAUG00010004933) ##22 sars1 (ENSSAUG00010004918) ENSSAUG00010004909 tmem106c (ENSSAUG00010004905) ENSSAUG00010004888 krt18a.2 (ENSSAUG00010004863) krt18a.1 (ENSSAUG00010004856) krt5 (ENSSAUG00010004578) zgc:171775 (ENSSAUG00010004555) ENSSAUG00010002298 ENSSAUG00010002157 LHFPL4 (ENSSAUG00010002149) CPNE9 (ENSSAUG00010002083) klf15 (ENSSAUG00010002055) ENSSAUG00010001211 CHST13 (ENSSAUG00010001173) Perciformes ANCESTRAL SPECIES 4 ENSGT00390000012981 ENSGT00940000153541.C.a.b ENSGT00940000153541.C.a.a ENSGT00940000165924 ENSGT00940000167093 ENSGT00940000156060 ENSGT00940000159085 ENSGT00390000003093 ENSGT00940000167423 ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000171106 ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a ENSGT00940000156977.f ENSGT00950000183042.b.a Perciformes_a ANCESTRAL SPECIES 2 ENSGT00390000012981 ENSGT00940000153541.C.a.b ENSGT00940000153541.C.a.a ENSGT00940000165924 ENSGT00940000167093 ENSGT00940000156060 ENSGT00940000159085 ENSGT00390000003093 ENSGT00940000167423 ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000153792.B ENSGT00940000171106 ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a ENSGT00940000156977.f ENSGT00950000183042.b.a ENSGT00940000161154.b Pike perch MODERN SPECIES 7 TNNC2 (ENSSLUG00000004928) ENSSLUG00000004940 ENSSLUG00000004963 ENSSLUG00000005415 lamb2 (ENSSLUG00000011545) USP19 (ENSSLUG00000019677) ENSSLUG00000019697 ENSSLUG00000019699 ENSSLUG00000019706 ENSSLUG00000019708 pim1 (ENSSLUG00000019715) gss (ENSSLUG00000019731) zgc:103759 (ENSSLUG00000019778) ARHGAP4 (ENSSLUG00000019783) #9 cav4b (ENSSLUG00000019790) fam50a (ENSSLUG00000019797) ##22 sars1 (ENSSLUG00000019815) ENSSLUG00000019825 tmem106c (ENSSLUG00000019827) ENSSLUG00000019866 krt18a.2 (ENSSLUG00000020528) krt18a.1 (ENSSLUG00000020535) krt8 (ENSSLUG00000020546) zgc:171775 (ENSSLUG00000020580) ENSSLUG00000020627 LHFPL4 (ENSSLUG00000020758) CPNE9 (ENSSLUG00000020765) klf15 (ENSSLUG00000020775) ENSSLUG00000020788 ENSSLUG00000020838 PLXNA1 (ENSSLUG00000020983) ##23 Channel bull blenny MODERN SPECIES 21 tnnc2.2 (ENSCGOG00000014242) TNNC2 (ENSCGOG00000014234) ENSCGOG00000014231 ENSCGOG00000014215 ENSCGOG00000012610 lamb2 (ENSCGOG00000011924) USP19 (ENSCGOG00000010456) ENSCGOG00000010413 ENSCGOG00000010409 ENSCGOG00000010406 pim1 (ENSCGOG00000010401) gss (ENSCGOG00000010196) zgc:103759 (ENSCGOG00000010188) ARHGAP4 (ENSCGOG00000009369) #9 cav4b (ENSCGOG00000009323) fam50a (ENSCGOG00000008439) ##22 sars1 (ENSCGOG00000008038) ENSCGOG00000008026 tmem106c (ENSCGOG00000008023) ENSCGOG00000007916 krt18a.2 (ENSCGOG00000007903) krt18a.1 (ENSCGOG00000007869) krt8 (ENSCGOG00000007544) krt5 (ENSCGOG00000007443) ENSCGOG00000007439 ENSCGOG00000007438 ENSCGOG00000007437 ENSCGOG00000007433 LHFPL4 (ENSCGOG00000007432) CPNE9 (ENSCGOG00000007174) klf15 (ENSCGOG00000007159) Cottioidei ANCESTRAL SPECIES 2 ENSGT00390000012981 ENSGT00940000153541.C.a.b ENSGT00940000153541.C.a.a ENSGT00940000165924 ENSGT00940000167093 ENSGT00940000156060 ENSGT00940000159085 ENSGT00390000003093 ENSGT00940000167423 ENSGT00940000166296 ENSGT00940000153394.c.a ENSGT00390000013764 ENSGT00390000016224 ENSGT00950000182824.a.b.b.d #9 ENSGT00950000183006.A.a.b ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000171106 ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT00940000157877.a ENSGT00990000203541.a.b.b.e.b ENSGT00940000159659.d.a ENSGT00940000156977.f ENSGT00950000183042.b.a Lumpfish MODERN SPECIES 22 tnnc2.2 (ENSCLMG00005012137) TNNC2 (ENSCLMG00005012136) ENSCLMG00005012135 ENSCLMG00005010472 lamb2 (ENSCLMG00005009606) USP19 (ENSCLMG00005009366) ENSCLMG00005009355 ENSCLMG00005009354 ENSCLMG00005009353 ENSCLMG00005009352 pim1 (ENSCLMG00005009341) gss (ENSCLMG00005008667) zgc:103759 (ENSCLMG00005008655) ARHGAP4 (ENSCLMG00005008649) #9 cav4b (ENSCLMG00005008645) fam50a (ENSCLMG00005008630) ##22 ENSCLMG00005008623 sars1 (ENSCLMG00005008612) ENSCLMG00005008610 tmem106c (ENSCLMG00005008609) ENSCLMG00005007690 krt18a.2 (ENSCLMG00005007598) krt18a.1 (ENSCLMG00005007591) krt5 (ENSCLMG00005007587) krt8 (ENSCLMG00005007585) zgc:171775 (ENSCLMG00005007582) ENSCLMG00005007556 LHFPL4 (ENSCLMG00005007536) CPNE9 (ENSCLMG00005007529) KLF15 (ENSCLMG00005007525) SLC41A3 (ENSCLMG00005007522) Stickleback MODERN SPECIES 11 tnnc2.2 (ENSGACG00000004198) TNNC2 (ENSGACG00000004196) ENSGACG00000004193 ENSGACG00000004190 ENSGACG00000004187 lamb2 (ENSGACG00000004167) USP19 (ENSGACG00000004155) ENSGACG00000004152 zp3f.1 (ENSGACG00000004144) pim1 (ENSGACG00000004133) gss (ENSGACG00000004127) zgc:103759 (ENSGACG00000004125) ENSGACG00000004120 #9 ENSGACG00000004115 #9 ENSGACG00000004113 fam50a (ENSGACG00000004087) ##22 ENSGACG00000004085 sars1 (ENSGACG00000004044) ENSGACG00000004040 tmem106c (ENSGACG00000004023) ENSGACG00000004001 krt18a.1 (ENSGACG00000003800) krt8 (ENSGACG00000003794) krt5 (ENSGACG00000003787) zgc:171775 (ENSGACG00000003777) ENSGACG00000003767 ENSGACG00000003742 LHFPL4 (ENSGACG00000003739) CPNE9 (ENSGACG00000003721) klf15 (ENSGACG00000003717) SLC41A3 (ENSGACG00000003711) Cod MODERN SPECIES ENSGMOG00000002083 ENSGMOG00000008937 ENSGMOG00000036323 igsf21b (ENSGMOG00000036542) ENSGMOG00000013595 ENSGMOG00000027531 ENSGMOG00000013560 ENSGMOG00000029822 ENSGMOG00000004015 ENSGMOG00000022956 ENSGMOG00000026226 ENSGMOG00000003980 ENSGMOG00000003962 ENSGMOG00000036372 #9 ENSGMOG00000027462 fam50a (ENSGMOG00000004783) ##22 ENSGMOG00000028311 sars1 (ENSGMOG00000004761) ENSGMOG00000004749 ENSGMOG00000004729 ENSGMOG00000004659 krt18a.2 (ENSGMOG00000028474) krt18a.1 (ENSGMOG00000000117) krt8 (ENSGMOG00000014429) bcas2 (ENSGMOG00000014357) trim33 (ENSGMOG00000016005) slc66a1 (ENSGMOG00000015992) nr1h5 (ENSGMOG00000015966) ENSGMOG00000026487 ENSGMOG00000015911 ENSGMOG00000008404 Protacanthopterygii ANCESTRAL SPECIES 73 ENSGT00940000160139 ENSGT00530000063835.a ENSGT00940000158738 ENSGT00940000157198 ENSGT00940000164771.a ENSGT00390000015634 ENSGT00940000177261 ENSGT00940000153739.a.a ENSGT00950000183032.A.b.b.b.a.a ENSGT00940000156364.a.a ENSGT00940000157472 ENSGT00940000167283.a ENSGT00510000046985.o ENSGT00390000004928 ENSGT00940000159012 ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00390000012644 ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 ENSGT00940000158508 ENSGT00940000162710.c.a ENSGT00940000166935 ENSGT00390000006247 ENSGT00940000158411 ENSGT00940000158161.e.b ENSGT00940000160669 Salmoninae ANCESTRAL SPECIES 145 ENSGT00390000015634.i ENSGT00940000153739.a.a.h ENSGT00950000183032.A.b.b.b.a.a.a.a ENSGT00950000183032.A.b.b.b.a.a.b ENSGT00940000156364.a.a.c ENSGT00940000157472.e.b ENSGT00940000167283.a.c ENSGT00510000046985.o.c.a.a ENSGT00390000004928.z ENSGT00940000159012.h ENSGT00390000004735.C ##22 ENSGT00940000166975.c ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a.d ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a.c ENSGT00940000157415.b ENSGT00940000158508.q ENSGT00940000162710.c.a.c ENSGT00940000166935 ENSGT00390000006247.gd ENSGT00940000158411.c ENSGT00940000158161.e.b.c ENSGT00940000160669.c ENSGT00940000156542.a.h ENSGT00940000158860.b.b Huchen MODERN SPECIES 1282 TBC1D22B (ENSHHUG00000041635) ENSHHUG00000041627 snrpg (ENSHHUG00000041570) plpbp (ENSHHUG00000041607) tmed4 (ENSHHUG00000041565) fam50a (ENSHHUG00000041449) ##22 srpk1a (ENSHHUG00000041446) ENSHHUG00000041445 lhfpl5b (ENSHHUG00000041426) ENSHHUG00000041416 Salmoninae_a ANCESTRAL SPECIES 27 ENSGT00940000163942.b.e ENSGT00940000158374.c.d ENSGT00510000048446 ENSGT00940000157198.z ENSGT00940000164771.a.f ENSGT00390000015634.i ENSGT00940000153739.a.a.h ENSGT00950000183032.A.b.b.b.a.a.a.a ENSGT00950000183032.A.b.b.b.a.a.b ENSGT00940000156364.a.a.c ENSGT00940000157472.e.b ENSGT00940000167283.a.c ENSGT00510000046985.o.c.a.a ENSGT00390000004928.z ENSGT00940000159012.h ENSGT00390000004735.C ##22 ENSGT00940000166975.c ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a.d ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a.c ENSGT00940000157415.b ENSGT00940000158508.q ENSGT00940000162710.c.a.c.b ENSGT00940000166935 ENSGT00390000006247.gd ENSGT00940000158411.c ENSGT00940000158161.e.b.c ENSGT00940000160669.c ENSGT00940000156542.a.h ENSGT00940000158860.b.b Salmo ANCESTRAL SPECIES 16 ENSGT00940000160546.b ENSGT00940000163942.b.e ENSGT00940000158374.c.d ENSGT00510000048446 ENSGT00990000205866.a ENSGT00940000157198.z ENSGT00940000164771.a.f ENSGT00390000015634.i ENSGT00940000153739.a.a.h ENSGT00950000183032.A.b.b.b.a.a.a.a ENSGT00940000156364.a.a.c ENSGT00940000157472.e.b ENSGT00940000167283.a.c ENSGT00390000004928.z ENSGT00940000159012.h ENSGT00390000004735.C ##22 ENSGT00940000166975.c ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a.d ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a.d.b ENSGT00940000157415.b ENSGT00940000158508.q ENSGT00940000155036.b ENSGT00940000166935 ENSGT00390000006247.gd ENSGT00940000158411.c ENSGT00940000158161.e.b.c ENSGT00940000160669.c ENSGT00940000156542.a.h ENSGT00940000158860.b.b Atlantic salmon MODERN SPECIES 6 si:ch211-251b21.1 (ENSSSAG00000068384) ENSSSAG00000065267 pex10 (ENSSSAG00000065127) ENSSSAG00000065119 tm9sf4 (ENSSSAG00000063233) plagl2 (ENSSSAG00000098600) pofut1 (ENSSSAG00000063159) kif3b (ENSSSAG00000063137) ENSSSAG00000063152 ENSSSAG00000093942 ENSSSAG00000100244 ENSSSAG00000068492 ENSSSAG00000068461 plpbp (ENSSSAG00000068455) ENSSSAG00000105280 fam50a (ENSSSAG00000068438) ##22 ENSSSAG00000068423 ENSSSAG00000089855 ENSSSAG00000112398 ENSSSAG00000118666 ENSSSAG00000086927 ENSSSAG00000086349 ENSSSAG00000098999 ENSSSAG00000108337 ENSSSAG00000099241 mmp9 (ENSSSAG00000069874) ENSSSAG00000070091 ENSSSAG00000085130 ENSSSAG00000070098 prok1 (ENSSSAG00000094833) lamtor5 (ENSSSAG00000098985) River trout MODERN SPECIES 20 prkcz (ENSSTUG00000017660) skia (ENSSTUG00000017618) plch2a (ENSSTUG00000017430) pex10 (ENSSTUG00000017395) ENSSTUG00000017390 ENSSTUG00000017383 tm9sf4 (ENSSTUG00000017259) plagl2 (ENSSTUG00000017238) pofut1 (ENSSTUG00000017227) kif3b (ENSSTUG00000017146) PCMTD2 (ENSSTUG00000017134) TBC1D22B (ENSSTUG00000016446) ENSSTUG00000016414 plpbp (ENSSTUG00000016373) tmed4 (ENSSTUG00000016345) fam50a (ENSSTUG00000016311) ##22 srpk1a (ENSSTUG00000016192) lhfpl5b (ENSSTUG00000016178) ENSSTUG00000016168 CPNE5 (ENSSTUG00000016148) ENSSTUG00000016143 dclre1b (ENSSTUG00000016134) mmp9 (ENSSTUG00000015832) ENSSTUG00000015803 ENSSTUG00000015792 PGA3 (ENSSTUG00000015775) prok1 (ENSSTUG00000015767) lamtor5 (ENSSTUG00000015741) slc16a4 (ENSSTUG00000015689) RBM15 (ENSSTUG00000015676) ALX3 (ENSSTUG00000015667) Oncorhynchus DUPLICATION Oncorhynchus ANCESTRAL SPECIES 20 ENSGT00940000160546.b ENSGT00940000163942.b.e ENSGT00940000158374.c.d ENSGT00510000048446 ENSGT00940000157198.z ENSGT00940000164771.a.f ENSGT00390000015634.i ENSGT00940000153739.a.a.h ENSGT00950000183032.A.b.b.b.a.a.b ENSGT00940000156364.a.a.c ENSGT00940000157472.e.b ENSGT00940000167283.a.c ENSGT00510000046985.o.c.a.a ENSGT00390000004928.z ENSGT00940000159012.h ENSGT00390000004735.C.i ##22 ENSGT00940000166975.c ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a.d ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a.c ENSGT00940000157415.b ENSGT00940000158508.q ENSGT00940000162710.c.a.c.b ENSGT00940000166935 ENSGT00390000006247.gd.b ENSGT00940000158411.c ENSGT00940000158161.e.b.c ENSGT00940000160669.c ENSGT00940000156542.a.h ENSGT00940000158860.b.b Oncorhynchus_a ANCESTRAL SPECIES 7 ENSGT00940000163942.b.e ENSGT00940000158374.c.d ENSGT00510000048446 ENSGT00990000205866.a ENSGT00940000157198.z ENSGT00940000164771.a.f ENSGT00390000015634.i ENSGT00940000153739.a.a.h ENSGT00950000183032.A.b.b.b.a.a.b ENSGT00940000156364.a.a.c ENSGT00940000157472.e.b ENSGT00940000167283.a.c ENSGT00510000046985.o.c.a.a ENSGT00390000004928.z ENSGT00940000159012.h ENSGT00390000004735.C.i ##22 ENSGT00940000166975.c ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a.d ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a.c.b ENSGT00940000157415.b ENSGT00940000158508.q ENSGT00940000162710.c.a.c.b ENSGT00940000166935 ENSGT00390000006247.gd.b ENSGT00940000158411.c ENSGT00940000158161.e.b.c ENSGT00940000160669.c ENSGT00940000156542.a.h ENSGT00940000158860.b.b Coho salmon MODERN SPECIES 8 PLCH2 (ENSOKIG00005006908) ENSOKIG00005007345 pex10 (ENSOKIG00005007356) ENSOKIG00005007372 ENSOKIG00005007378 tm9sf4 (ENSOKIG00005007408) plagl2 (ENSOKIG00005007631) pofut1 (ENSOKIG00005007641) kif3b (ENSOKIG00005007672) ENSOKIG00005007759 MYT1 (ENSOKIG00005007791) TBC1D22B (ENSOKIG00005007941) ENSOKIG00005009662 plpbp (ENSOKIG00005009671) tmed4 (ENSOKIG00005009758) fam50a (ENSOKIG00005009807) ##22 fam50a (ENSOKIG00005009973) ##22 srpk1a (ENSOKIG00005009999) lhfpl5b (ENSOKIG00005010020) CPNE5 (ENSOKIG00005010031) dclre1b (ENSOKIG00005010083) ADORA1 (ENSOKIG00005010093) mmp9 (ENSOKIG00005010179) ZNF335 (ENSOKIG00005011071) ENSOKIG00005011104 prok1 (ENSOKIG00005011263) lamtor5 (ENSOKIG00005011270) slc16a4 (ENSOKIG00005011288) RBM15 (ENSOKIG00005011305) ALX3 (ENSOKIG00005011309) slc6a17 (ENSOKIG00005011316) Chinook salmon MODERN SPECIES 7 prok1 (ENSOTSG00005004142) ENSOTSG00005004140 ENSOTSG00005004133 mmp9 (ENSOTSG00005004080) si:ch211-251b21.1 (ENSOTSG00005004075) plch2a (ENSOTSG00005004071) pex10 (ENSOTSG00005004069) ENSOTSG00005004068 tm9sf4 (ENSOTSG00005004066) plagl2 (ENSOTSG00005004063) sox1b (ENSOTSG00005004060) ENSOTSG00005004059 snrpg (ENSOTSG00005004057) plpbp (ENSOTSG00005004055) tmed4 (ENSOTSG00005004052) fam50a (ENSOTSG00005004048) ##22 srpk1a (ENSOTSG00005002875) lhfpl5b (ENSOTSG00005002839) ENSOTSG00005002827 skia (ENSOTSG00005002821) ENSOTSG00005002815 ENSOTSG00005002809 TSPAN10 (ENSOTSG00005002467) dclre1b (ENSOTSG00005002458) irf2bp2a (ENSOTSG00005001945) ENSOTSG00005033109 ENSOTSG00005033108 MAPK14 (ENSOTSG00005033067) ENSOTSG00005033064 ENSOTSG00005033062 ENSOTSG00005033060 Rainbow trout MODERN SPECIES 30 pex10 (ENSOMYG00000007764) tm9sf4 (ENSOMYG00000007426) ENSOMYG00000053638 plagl2 (ENSOMYG00000007109) pofut1 (ENSOMYG00000007088) kif3b (ENSOMYG00000007067) ENSOMYG00000056241 ENSOMYG00000061166 ENSOMYG00000074161 ENSOMYG00000006241 ENSOMYG00000005046 snrpg (ENSOMYG00000005034) plpbp (ENSOMYG00000004982) ENSOMYG00000005026 tmed4 (ENSOMYG00000004912) fam50a (ENSOMYG00000004884) ##22 ENSOMYG00000004705 ENSOMYG00000004541 ENSOMYG00000073436 ENSOMYG00000064311 ENSOMYG00000071486 mmp9 (ENSOMYG00000057861) ENSOMYG00000008004 ENSOMYG00000008265 prok1 (ENSOMYG00000073056) lamtor5 (ENSOMYG00000008410) slc16a4 (ENSOMYG00000008452) RBM15 (ENSOMYG00000008461) ENSOMYG00000070643 ENSOMYG00000066083 slc6a17 (ENSOMYG00000065402) Oncorhynchus ANCESTRAL SPECIES ENSGT00390000004735.C.j ##22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00390000004735.C.j ##22 Coho salmon MODERN SPECIES 8 ENSOKIG00005007345 pex10 (ENSOKIG00005007356) ENSOKIG00005007372 ENSOKIG00005007378 tm9sf4 (ENSOKIG00005007408) plagl2 (ENSOKIG00005007631) pofut1 (ENSOKIG00005007641) kif3b (ENSOKIG00005007672) ENSOKIG00005007759 MYT1 (ENSOKIG00005007791) TBC1D22B (ENSOKIG00005007941) ENSOKIG00005009662 plpbp (ENSOKIG00005009671) tmed4 (ENSOKIG00005009758) fam50a (ENSOKIG00005009807) ##22 fam50a (ENSOKIG00005009973) ##22 srpk1a (ENSOKIG00005009999) lhfpl5b (ENSOKIG00005010020) CPNE5 (ENSOKIG00005010031) dclre1b (ENSOKIG00005010083) ADORA1 (ENSOKIG00005010093) mmp9 (ENSOKIG00005010179) ZNF335 (ENSOKIG00005011071) ENSOKIG00005011104 prok1 (ENSOKIG00005011263) lamtor5 (ENSOKIG00005011270) slc16a4 (ENSOKIG00005011288) RBM15 (ENSOKIG00005011305) ALX3 (ENSOKIG00005011309) slc6a17 (ENSOKIG00005011316) ENSOKIG00005011325 Northern pike MODERN SPECIES 11 si:ch211-251b21.1 (ENSELUG00000013183) plch2a (ENSELUG00000013366) pex10 (ENSELUG00000013445) ENSELUG00000013457 tm9sf4 (ENSELUG00000013512) plagl2 (ENSELUG00000013532) pofut1 (ENSELUG00000013687) ENSELUG00000013715 kif3b (ENSELUG00000013731) PCMTD2 (ENSELUG00000013754) MYT1 (ENSELUG00000013803) TBC1D22B (ENSELUG00000013919) snrpg (ENSELUG00000013944) plpbp (ENSELUG00000013963) tmed4 (ENSELUG00000013982) fam50a (ENSELUG00000014019) ##22 ENSELUG00000014039 srpk1a (ENSELUG00000014092) lhfpl5b (ENSELUG00000014128) CLPS (ENSELUG00000027977) cpne5a (ENSELUG00000014236) dclre1b (ENSELUG00000014288) adora1b (ENSELUG00000014300) mmp9 (ENSELUG00000000542) ZNF335 (ENSELUG00000014890) PGA3 (ENSELUG00000015506) ENSELUG00000016001 ENSELUG00000015670 ENSELUG00000015905 prok1 (ENSELUG00000025588) lamtor5 (ENSELUG00000016056) Otomorpha ANCESTRAL SPECIES 279 ENSGT00940000167283.a ENSGT00510000046985.o ENSGT00390000004928 ENSGT00940000159012 ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000156186.k ENSGT00940000171106 ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000153336.a.a ENSGT00940000163961.a.a.b ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT01020000230394.e.a.a.b.a.a.b.a.b.a ENSGT00940000157877.a ENSGT00990000203541.a.b.a.b Clupeiformes ANCESTRAL SPECIES 81 ENSGT00950000183195.a ENSGT00940000155851.c.a ENSGT00940000159698 ENSGT00390000002174.a ENSGT00950000183178.a ENSGT01030000235094 ENSGT00390000013978.d ENSGT00940000164771.b ENSGT00390000012948.b ENSGT00390000009842 ENSGT00940000156211.b ENSGT00940000167283.a ENSGT00510000046985.o ENSGT00390000004928 ENSGT00940000159012 ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00940000156186.k ENSGT00940000161281 ENSGT00940000163886.B.b.a ENSGT00940000153336.a.a ENSGT00940000163961.a.a.a ENSGT00940000161090.B.c.a.a ENSGT00940000161090.B.c.b.a.a.a ENSGT00940000166426 ENSGT01020000230394.e.a.a.b.a.a.b.a.b.a ENSGT00940000157877.a.k ENSGT00990000203541.a.b.a.b ENSGT00940000159659.d.a.d ENSGT00940000153110.B.e.a Denticle herring DUPLICATION Denticle herring MODERN SPECIES 1 nr1d4a (ENSDCDG00000004053) mfsd5 (ENSDCDG00000004049) ENSDCDG00000003942 ENSDCDG00000003932 rbms2b (ENSDCDG00000003905) ENSDCDG00000003891 plagx (ENSDCDG00000003888) trappc6b (ENSDCDG00000003887) tpx2 (ENSDCDG00000003869) ENSDCDG00000003862 ENSDCDG00000003855 ENSDCDG00000003853 snrpg (ENSDCDG00000003848) plpbp (ENSDCDG00000003845) tmed4 (ENSDCDG00000003841) fam50a (ENSDCDG00000003835) ##22 sars1 (ENSDCDG00000003831) ENSDCDG00000003826 tmem106c (ENSDCDG00000003823) ENSDCDG00000003821 ENSDCDG00000003282 eif4ba (ENSDCDG00000003042) ENSDCDG00000002953 irx7 (ENSDCDG00000002935) irx7 (ENSDCDG00000002923) ENSDCDG00000032022 ENSDCDG00000032019 ENSDCDG00000032018 ENSDCDG00000031972 tmem106c (ENSDCDG00000031951) ENSDCDG00000031948 Denticle herring MODERN SPECIES 1 ENSDCDG00000031800 CDA (ENSDCDG00000031811) pink1 (ENSDCDG00000031862) agmat (ENSDCDG00000031866) ENSDCDG00000031879 PAN2 (ENSDCDG00000031883) plagx (ENSDCDG00000031888) trappc6b (ENSDCDG00000031893) tpx2 (ENSDCDG00000031899) ENSDCDG00000031905 ENSDCDG00000031908 ENSDCDG00000031910 ENSDCDG00000031913 plpbp (ENSDCDG00000031916) tmed4 (ENSDCDG00000031922) fam50a (ENSDCDG00000031928) ##22 ENSDCDG00000031939 sars1 (ENSDCDG00000031944) ENSDCDG00000031948 tmem106c (ENSDCDG00000031951) ENSDCDG00000031972 ENSDCDG00000032018 ENSDCDG00000032019 ENSDCDG00000032022 irx7 (ENSDCDG00000002923) irx7 (ENSDCDG00000002935) ENSDCDG00000002953 eif4ba (ENSDCDG00000003042) ENSDCDG00000003282 ENSDCDG00000003821 tmem106c (ENSDCDG00000003823) Atlantic herring MODERN SPECIES 20 DNAJC16 (ENSCHAG00000000392) casp9 (ENSCHAG00000000630) nemp1 (ENSCHAG00000000986) ormdl2 (ENSCHAG00000001057) ENSCHAG00000001083 ENSCHAG00000001098 PAN2 (ENSCHAG00000001224) plagx (ENSCHAG00000001430) trappc6b (ENSCHAG00000001448) tpx2 (ENSCHAG00000001544) ENSCHAG00000002510 ENSCHAG00000002771 snrpg (ENSCHAG00000002799) plpbp (ENSCHAG00000002908) tmed4 (ENSCHAG00000003764) fam50a (ENSCHAG00000003883) ##22 ENSCHAG00000003998 sars1 (ENSCHAG00000004029) ENSCHAG00000004080 tmem106c (ENSCHAG00000004103) ENSCHAG00000004166 eif4ba (ENSCHAG00000004469) krt18a.1 (ENSCHAG00000004526) krt5 (ENSCHAG00000004593) krt5 (ENSCHAG00000005385) krt5 (ENSCHAG00000005481) krt5 (ENSCHAG00000005517) krt5 (ENSCHAG00000005662) krt5 (ENSCHAG00000006111) krt5 (ENSCHAG00000006207) ENSCHAG00000006678 Otophysi ANCESTRAL SPECIES 107 ENSGT00940000158061.a ENSGT00950000183072.b.a ENSGT00940000157629 ENSGT00940000160106 ENSGT00390000000685 ENSGT00610000087489 ENSGT00950000182882.A.a.i.b ENSGT00390000008169 ENSGT00940000154610.e.b.a ENSGT00940000154657.C ENSGT00390000006813 ENSGT00940000160056 ENSGT00510000046985.n.b.a ENSGT00390000004928 ENSGT00940000159012 ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00390000000903.b.b ENSGT01050000244850.A.b.a.b ##23 ENSGT00940000161154.b ENSGT00950000183042.b.a ENSGT00940000156977.f ENSGT00940000159659.d.a.c ENSGT00940000157172 ENSGT00390000017888 ENSGT00390000004915.b ENSGT00950000183056.A.b ENSGT00940000158351 ENSGT00940000159969.b.a.a ENSGT00940000162690 Characiphysae ANCESTRAL SPECIES 16 ENSGT00940000159931 ENSGT00940000158061.a ENSGT00950000183072.b.a ENSGT00940000157629 ENSGT00940000160106 ENSGT00390000000685 ENSGT00610000087489 ENSGT00950000182882.A.a.i.b ENSGT00390000008169 ENSGT00940000154610.e.b.a ENSGT00940000154657.C ENSGT00390000006813 ENSGT00510000046985.o ENSGT00390000004928 ENSGT00940000159012 ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00390000000903.b.b ENSGT01050000244850.A.b.a.b ##23 Channel catfish DUPLICATION Channel catfish MODERN SPECIES 6 fam50a (ENSIPUG00000018198) ##22 ENSIPUG00000018226 PROSC (ENSIPUG00000018250) Sars (ENSIPUG00000018281) cs (ENSIPUG00000018348) SLC26A9 (ENSIPUG00000018389) slc48a1a (ENSIPUG00000018425) RAPGEF3 (ENSIPUG00000018451) itga5 (ENSIPUG00000018509) ENSIPUG00000018635 Csrnp2 (ENSIPUG00000018645) ENSIPUG00000018655 tfcp2 (ENSIPUG00000018670) pou6f1 (ENSIPUG00000018743) DAZAP2 (ENSIPUG00000018760) ENSIPUG00000018771 Channel catfish MODERN SPECIES 26 ENSIPUG00000018031 rfwd2 (ENSIPUG00000018061) tnr (ENSIPUG00000018119) ENSIPUG00000018150 kiaa0040 (ENSIPUG00000018161) tnn (ENSIPUG00000018170) mrps14 (ENSIPUG00000018252) cacybp (ENSIPUG00000018267) PLK3 (ENSIPUG00000018304) rasal2 (ENSIPUG00000018353) GPR25 (ENSIPUG00000018423) chd8 (ENSIPUG00000019891) cbln12 (ENSIPUG00000019982) mmp14b (ENSIPUG00000019993) si:ch211-14a17.11 (ENSIPUG00000020030) fam50a (ENSIPUG00000020033) ##22 ENSIPUG00000020044 ENSIPUG00000020064 atp6v0b (ENSIPUG00000020067) ENSIPUG00000020081 ENSIPUG00000020089 ENSIPUG00000020095 ENSIPUG00000020107 ENSIPUG00000020119 b4galt2 (ENSIPUG00000020132) zgc:113531 (ENSIPUG00000020155) ccdc24 (ENSIPUG00000020168) slc6a9 (ENSIPUG00000002198) ENSIPUG00000002222 rnf220 (ENSIPUG00000002249) tmem53 (ENSIPUG00000002309) Characiphysae_b ANCESTRAL SPECIES 121 ENSGT00940000158061.a ENSGT00950000183072.b.a ENSGT00940000157629 ENSGT00940000160106 ENSGT00390000000685 ENSGT00610000087489 ENSGT00950000182882.A.a.i.b ENSGT00390000008169 ENSGT00940000154610.e.b.a ENSGT00940000154657.C ENSGT00390000006813 ENSGT00940000160056 ENSGT00510000046985.o ENSGT00390000004928 ENSGT00940000159012 ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00390000000903.b.b ENSGT01050000244850.A.b.a.b ##23 Characoidei ANCESTRAL SPECIES 116 ENSGT00940000158061.a ENSGT00950000183072.b.a ENSGT00940000157629 ENSGT00940000160106 ENSGT00390000000685 ENSGT00610000087489 ENSGT00950000182882.A.a.i.b ENSGT00390000008169 ENSGT00940000154610.e.b.a ENSGT00940000154657.C ENSGT00390000006813 ENSGT00940000160056 ENSGT00510000046985.o ENSGT00390000004928 ENSGT00940000159012 ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00390000000903.b.b ENSGT01050000244850.A.b.a.b ##23 Mexicana tetra MODERN SPECIES 6 CSRNP2 (ENSAMXG00000016611) TFCP2 (ENSAMXG00000016608) pou6f1 (ENSAMXG00000036922) dazap2 (ENSAMXG00000030046) ENSAMXG00000039908 bin2a (ENSAMXG00000037593) ENSAMXG00000016589 racgap1 (ENSAMXG00000016578) ENSAMXG00000016565 cs (ENSAMXG00000016547) COQ10A (ENSAMXG00000036699) ENSAMXG00000038253 snrpg (ENSAMXG00000030568) plpbp (ENSAMXG00000037006) tmed4 (ENSAMXG00000035904) fam50a (ENSAMXG00000016532) ##22 ENSAMXG00000039581 sars1 (ENSAMXG00000016507) chchd6a (ENSAMXG00000038765) PLXNA1 (ENSAMXG00000004133) ##23 ENSAMXG00000037527 MCOLN3 (ENSAMXG00000004172) DNAI3 (ENSAMXG00000004204) SYDE2 (ENSAMXG00000004233) zgc:65873 (ENSAMXG00000031697) DDAH1 (ENSAMXG00000004248) ccn1 (ENSAMXG00000018010) ENSAMXG00000038881 ENSAMXG00000032393 ENSAMXG00000036259 ENSAMXG00000005211 Red-bellied piranha MODERN SPECIES 32 CSRNP2 (ENSPNAG00000021965) TFCP2 (ENSPNAG00000022043) ENSPNAG00000022064 pou6f1 (ENSPNAG00000022088) dazap2 (ENSPNAG00000022108) ENSPNAG00000022133 bin2a (ENSPNAG00000022151) ENSPNAG00000022173 racgap1 (ENSPNAG00000022256) ENSPNAG00000003718 cs (ENSPNAG00000022393) COQ10A (ENSPNAG00000022438) snrpg (ENSPNAG00000022455) plpbp (ENSPNAG00000022488) tmed4 (ENSPNAG00000005189) fam50a (ENSPNAG00000022565) ##22 ENSPNAG00000022595 sars1 (ENSPNAG00000022638) chchd6a (ENSPNAG00000022678) ENSPNAG00000022707 ENSPNAG00000022721 PLXNA1 (ENSPNAG00000022843) ##23 lad1 (ENSPNAG00000022897) ENSPNAG00000022928 csrp1a (ENSPNAG00000022948) NAV1 (ENSPNAG00000023081) mybpha (ENSPNAG00000023176) Electric eel MODERN SPECIES 122 itga5 (ENSEEEG00000000627) CSRNP2 (ENSEEEG00000000039) TFCP2 (ENSEEEG00000024441) pou6f1 (ENSEEEG00000024439) dazap2 (ENSEEEG00000024437) ENSEEEG00000024436 bin2a (ENSEEEG00000024435) ENSEEEG00000024433 racgap1 (ENSEEEG00000024429) ENSEEEG00000024428 cs (ENSEEEG00000024425) COQ10A (ENSEEEG00000024423) snrpg (ENSEEEG00000024422) plpbp (ENSEEEG00000024421) tmed4 (ENSEEEG00000024420) fam50a (ENSEEEG00000024417) ##22 sars1 (ENSEEEG00000024415) chchd6a (ENSEEEG00000024413) ENSEEEG00000024409 ##23 Cyprinoidei ANCESTRAL SPECIES ENSGT00940000158061.a ENSGT00950000183072.b.a ENSGT00940000157629.m ENSGT00940000160106 ENSGT00390000000685 ENSGT00610000087489 ENSGT00950000182882.A.a.i.b ENSGT00390000008169 ENSGT00940000154610.e.b.a ENSGT00940000154657.C ENSGT00390000006813.d ENSGT00940000160056 ENSGT00510000046985.n.b.a ENSGT00390000004928 ENSGT00940000159012 ENSGT00390000004735.C ##22 ENSGT00940000156669.a ENSGT00940000153792.B ENSGT00390000000903.b.b.b ENSGT01050000244850.A.b.a.b ##23 ENSGT00940000161154.b ENSGT00950000183042.b.a ENSGT00940000156977.f ENSGT00940000159659.d.a.c ENSGT00940000157172 ENSGT00940000178326 ENSGT00390000017888 ENSGT00390000004915.b ENSGT00950000183056.A.b ENSGT00940000158351 ENSGT00940000159969.b.a.a Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 76 ENSGT00940000158061.a.c ENSGT00950000183072.b.a.b ENSGT00940000157629.m.a ENSGT00940000160106.n ENSGT00390000000685.cb ENSGT00610000087489.d ENSGT00950000182882.A.a.i.b.b ENSGT00390000008169.b ENSGT00940000154610.e.b.a.a ENSGT00940000154657.C.e ENSGT00390000006813.d.b ENSGT00940000160056.c ENSGT00510000046985.n.b.b.a.a ENSGT00390000004928.u ENSGT00940000159012.d ENSGT00390000004735.C.o ##22 ENSGT00940000156669.a.a ENSGT00940000153792.B.q ENSGT00390000000903.b.b.a ENSGT01050000244850.A.b.a.b.b ##23 Goldfish DUPLICATION Goldfish MODERN SPECIES 42 itga5 (ENSCARG00000061114) CSRNP2 (ENSCARG00000061014) TFCP2 (ENSCARG00000060862) pou6f1 (ENSCARG00000060799) dazap2 (ENSCARG00000060775) ENSCARG00000060768 bin2a (ENSCARG00000060667) ENSCARG00000060624 racgap1 (ENSCARG00000060367) ENSCARG00000060338 cs (ENSCARG00000060087) COQ10A (ENSCARG00000060050) SNRPG (ENSCARG00000060020) plpbp (ENSCARG00000059939) tmed4 (ENSCARG00000059857) fam50a (ENSCARG00000059622) ##22 ENSCARG00000059588 sars1 (ENSCARG00000059512) ENSCARG00000059439 PLXNA1 (ENSCARG00000058290) ##23 ENSCARG00000058220 fam3a (ENSCARG00000058168) #27 idh3g (ENSCARG00000058144) AVPR2 (ENSCARG00000058130) #8 arhgap4a (ENSCARG00000058079) #9 casp9 (ENSCARG00000057607) NOL9 (ENSCARG00000057575) ZBTB48 (ENSCARG00000057210) klhl21 (ENSCARG00000057175) ENSCARG00000057165 SYT6 (ENSCARG00000057152) Goldfish MODERN SPECIES 1069 cs (ENSCARG00000032281) COQ10A (ENSCARG00000032426) snrpg (ENSCARG00000032441) plpbp (ENSCARG00000032459) tmed4 (ENSCARG00000032484) fam50a (ENSCARG00000032523) ##22 ENSCARG00000032567 sars1 (ENSCARG00000032582) ENSCARG00000032603 Cyprininae_a ANCESTRAL SPECIES 17 ENSGT00940000158061.a.c ENSGT00950000183072.b.a.b ENSGT00940000157629.m.a ENSGT00940000160106.n ENSGT00390000000685.cb ENSGT00610000087489.d ENSGT00950000182882.A.a.i.b.b ENSGT00390000008169.b ENSGT00940000154610.e.b.a.a ENSGT00940000154657.C.e ENSGT00390000006813.d.b ENSGT00940000160056.c ENSGT00510000046985.n.b.b.a.a ENSGT00390000004928.u ENSGT00940000159012.d ENSGT00390000004735.C.o ##22 ENSGT00940000156669.a.a ENSGT00940000153792.B.q ENSGT00390000000903.b.b.a ENSGT01050000244850.A.b.a.b.b ##23 ENSGT00940000161154.b.c ENSGT00950000183042.b.a.c ENSGT00940000156977.f.d ENSGT00940000159659.d.a.c.b ENSGT00940000157172.a ENSGT00940000178326.a.a ENSGT00390000004915.b.b ENSGT00950000183056.A.b.e ENSGT00940000158351 ENSGT00940000159969.b.a.a ENSGT00390000015191.a Common carp reference MODERN SPECIES 11 slc48a1a (ENSCCRG00000081921) itga5 (ENSCCRG00000008852) CSRNP2 (ENSCCRG00000061112) TFCP2 (ENSCCRG00000068172) pou6f1 (ENSCCRG00000060837) dazap2 (ENSCCRG00000023458) ENSCCRG00000074660 bin2a (ENSCCRG00000014312) ENSCCRG00000014301 racgap1 (ENSCCRG00000014357) ENSCCRG00000070262 ENSCCRG00000057320 ENSCCRG00000075388 plpbp (ENSCCRG00000013074) tmed4 (ENSCCRG00000013068) fam50a (ENSCCRG00000013063) ##22 ENSCCRG00000013057 sars1 (ENSCCRG00000076605) ENSCCRG00000013049 ENSCCRG00000069801 ##23 CHST13 (ENSCCRG00000072187) ENSCCRG00000017682 klf15 (ENSCCRG00000024210) ENSCCRG00000024234 cmtr1 (ENSCCRG00000012138) ENSCCRG00000013230 fbxo25 (ENSCCRG00000013242) acp1 (ENSCCRG00000055453) ENSCCRG00000038835 ENSCCRG00000056361 tmem18 (ENSCCRG00000079482) Golden-line barbel MODERN SPECIES 12 CSRNP2 (ENSSGRG00000019901) ENSSGRG00000019902 ENSSGRG00000019903 pou6f1 (ENSSGRG00000019904) dazap2 (ENSSGRG00000019905) ENSSGRG00000019908 bin2a (ENSSGRG00000019912) ENSSGRG00000019943 racgap1 (ENSSGRG00000019954) ENSSGRG00000020046 cs (ENSSGRG00000020047) COQ10A (ENSSGRG00000020048) plpbp (ENSSGRG00000020049) snrpg (ENSSGRG00000020052) tmed4 (ENSSGRG00000020055) fam50a (ENSSGRG00000020059) ##22 sars1 (ENSSGRG00000020121) ENSSGRG00000020285 PLXNA1 (ENSSGRG00000020368) ##23 CHST13 (ENSSGRG00000023791) ENSSGRG00000023792 klf15 (ENSSGRG00000023794) CPNE9 (ENSSGRG00000023796) cmtr1 (ENSSGRG00000023797) ENSSGRG00000023798 fbxo25 (ENSSGRG00000023799) FAM110C (ENSSGRG00000023835) ACP1 (ENSSGRG00000023836) ENSSGRG00000023849 tmem18 (ENSSGRG00000023851) ENSSGRG00000023852 Cyprininae ANCESTRAL SPECIES 3 ENSGT00940000158061.a.d ENSGT00950000183072.b.a.a ENSGT00940000157629.m.b ENSGT00940000160106.m ENSGT00390000000685.bb ENSGT00610000087489.c ENSGT00950000182882.A.a.i.b.a ENSGT00390000008169.a ENSGT00940000154610.e.b.a.b ENSGT00940000154657.C.f ENSGT00390000006813.d.a ENSGT00940000160056.d ENSGT00510000046985.n.b.b.a.b ENSGT00390000004928.v ENSGT00940000159012.c ENSGT00390000004735.C.p ##22 ENSGT00940000156669.a.b ENSGT00940000153792.B.r ENSGT00390000000903.b.b.b ENSGT01050000244850.A.b.a.b.a ##23 ENSGT00940000161154.b.d ENSGT00950000183042.b.a.d ENSGT00940000156977.f.c ENSGT00940000159659.d.a.c.a ENSGT00940000157172.b ENSGT00940000178326.a.b ENSGT00390000004915.b.a ENSGT00950000183056.A.b.f ENSGT00940000158351 ENSGT00940000162505.a ENSGT00390000015191.b Goldfish MODERN SPECIES 15 itga5 (ENSCARG00000011199) CSRNP2 (ENSCARG00000011262) TFCP2 (ENSCARG00000011317) pou6f1 (ENSCARG00000011885) dazap2 (ENSCARG00000011920) ENSCARG00000011939 bin2a (ENSCARG00000011952) ENSCARG00000011992 racgap1 (ENSCARG00000012003) ENSCARG00000012055 cs (ENSCARG00000012113) COQ10A (ENSCARG00000012127) ENSCARG00000012137 plpbp (ENSCARG00000012156) tmed4 (ENSCARG00000012209) fam50a (ENSCARG00000012246) ##22 ENSCARG00000012287 sars1 (ENSCARG00000012302) chchd6a (ENSCARG00000012358) PLXNA1 (ENSCARG00000012515) ##23 CHST13 (ENSCARG00000015578) ENSCARG00000015582 klf15 (ENSCARG00000015596) CPNE9 (ENSCARG00000015608) cmtr1 (ENSCARG00000015737) ENSCARG00000016770 fbxo25 (ENSCARG00000016792) ENSCARG00000016809 ACP1 (ENSCARG00000016817) tmem18 (ENSCARG00000016832) ccnt1 (ENSCARG00000016841) Cyprininae_a ANCESTRAL SPECIES 5 ENSGT00940000158061.a.d ENSGT00950000183072.b.a.a ENSGT00940000157629.m.b ENSGT00940000160106.m ENSGT00390000000685.bb ENSGT00610000087489.c ENSGT00950000182882.A.a.i.b.a ENSGT00390000008169.a ENSGT00940000154610.e.b.a.b ENSGT00940000154657.C.f ENSGT00390000006813.d.a ENSGT00940000160056.d ENSGT00510000046985.n.b.a ENSGT00390000004928.v ENSGT00940000159012.c ENSGT00390000004735.C.p ##22 ENSGT00940000156669.a.b ENSGT00940000153792.B.r ENSGT00390000000903.b.b.b ENSGT01050000244850.A.b.a.b.a ##23 ENSGT00940000161154.b.d ENSGT00950000183042.b.a.d ENSGT00940000156977.f.c ENSGT00940000159659.d.a.c.a ENSGT00940000157172.b ENSGT00940000178326.a.b ENSGT00390000004915.b.a ENSGT00950000183056.A.b.f ENSGT00940000162505.a ENSGT00390000015191.b ENSGT00940000159544.d.a Common carp reference MODERN SPECIES 49 ENSCCRG00000056286 itga5 (ENSCCRG00000036566) CSRNP2 (ENSCCRG00000053001) TFCP2 (ENSCCRG00000079760) pou6f1 (ENSCCRG00000023462) dazap2 (ENSCCRG00000060219) bin2a (ENSCCRG00000076671) ENSCCRG00000072727 racgap1 (ENSCCRG00000014290) ENSCCRG00000055727 cs (ENSCCRG00000013157) ENSCCRG00000013124 ENSCCRG00000014270 plpbp (ENSCCRG00000057002) tmed4 (ENSCCRG00000013845) fam50a (ENSCCRG00000013793) ##22 ENSCCRG00000057059 sars1 (ENSCCRG00000013716) chchd6a (ENSCCRG00000013710) ENSCCRG00000023878 ##23 ENSCCRG00000066117 ENSCCRG00000024219 ENSCCRG00000011533 cmtr1 (ENSCCRG00000019392) ENSCCRG00000079143 fbxo25 (ENSCCRG00000038839) FAM110C (ENSCCRG00000070824) ACP1 (ENSCCRG00000038828) alkal2a (ENSCCRG00000079060) tmem18 (ENSCCRG00000023626) ccnt1 (ENSCCRG00000040298) Golden-line barbel MODERN SPECIES 177 itga5 (ENSSGRG00000022835) CSRNP2 (ENSSGRG00000022828) TFCP2 (ENSSGRG00000022436) pou6f1 (ENSSGRG00000022429) dazap2 (ENSSGRG00000022428) ENSSGRG00000022427 bin2a (ENSSGRG00000022426) racgap1 (ENSSGRG00000022319) ENSSGRG00000022312 ENSSGRG00000022310 cs (ENSSGRG00000022229) COQ10A (ENSSGRG00000022218) ENSSGRG00000022210 plpbp (ENSSGRG00000022177) tmed4 (ENSSGRG00000022162) fam50a (ENSSGRG00000021801) ##22 ENSSGRG00000021797 sars1 (ENSSGRG00000021477) chchd6a (ENSSGRG00000021464) PLXNA1 (ENSSGRG00000018790) ##23 ENSSGRG00000018763 ENSSGRG00000018733 klf15 (ENSSGRG00000018725) CPNE9 (ENSSGRG00000018715) cmtr1 (ENSSGRG00000018689) fbxo25 (ENSSGRG00000018682) ENSSGRG00000018681 ENSSGRG00000018680 ACP1 (ENSSGRG00000018679) ENSSGRG00000018678 tmem18 (ENSSGRG00000018677) Zebrafish MODERN SPECIES 15 CSRNP2 (ENSDARG00000075972) TFCP2 (ENSDARG00000060306) pou6f1 (ENSDARG00000011570) dazap2 (ENSDARG00000007867) ENSDARG00000092856 bin2a (ENSDARG00000003219) ENSDARG00000017811 racgap1 (ENSDARG00000015460) ENSDARG00000104767 cs (ENSDARG00000103364) ENSDARG00000094469 COQ10A (ENSDARG00000070393) snrpg (ENSDARG00000099667) plpbp (ENSDARG00000060288) tmed4 (ENSDARG00000024954) fam50a (ENSDARG00000024895) ##22 ENSDARG00000089004 sars1 (ENSDARG00000008237) chchd6a (ENSDARG00000003206) PLXNA1 (ENSDARG00000105452) ##23 CHST13 (ENSDARG00000004018) ENSDARG00000061272 klf15 (ENSDARG00000091127) CPNE9 (ENSDARG00000098252) cmtr1 (ENSDARG00000030830) ENSDARG00000104936 ENSDARG00000116857 fbxo25 (ENSDARG00000075172) FAM110C (ENSDARG00000096989) acp1 (ENSDARG00000076486) alkal2a (ENSDARG00000091073) Spotted gar MODERN SPECIES 647 SLC38A5 (ENSLOCG00000014448) ccdc22 (ENSLOCG00000014464) apex2 (ENSLOCG00000014467) zgc:162200 (ENSLOCG00000014473) nt5dc2 (ENSLOCG00000014477) FAM107A (ENSLOCG00000014487) renbp (ENSLOCG00000014488) ENSLOCG00000014494 ptpn18 (ENSLOCG00000014499) MON1B (ENSLOCG00000014503) gripap1 (ENSLOCG00000014510) kcnd1 (ENSLOCG00000014523) ENSLOCG00000014533 ENSLOCG00000014538 alas2 (ENSLOCG00000014541) fam50a (ENSLOCG00000014548) ##22 ENSLOCG00000014554 ENSLOCG00000014555 comtb (ENSLOCG00000014559) abt1 (ENSLOCG00000014561) grm6a (ENSLOCG00000014563) ENSLOCG00000014568 zgc:86609 (ENSLOCG00000014569) uxt (ENSLOCG00000014570) ELK1 (ENSLOCG00000014572) ENSLOCG00000017978 otud5a (ENSLOCG00000014573) pim2 (ENSLOCG00000014577) slc35a2 (ENSLOCG00000014583) bcap31 (ENSLOCG00000014585) slc6a8 (ENSLOCG00000014590) Reedfish MODERN SPECIES 2 ENSECRG00000009518 ENSECRG00000009530 praf2 (ENSECRG00000009538) cacna1fb (ENSECRG00000009592) sypb (ENSECRG00000009677) PRICKLE3 (ENSECRG00000009702) PLP2 (ENSECRG00000009732) ENSECRG00000009746 PDZD4 (ENSECRG00000009757) kdm5c (ENSECRG00000009781) IQSEC2 (ENSECRG00000009836) gripap1 (ENSECRG00000009901) ENSECRG00000009957 TREX2 (ENSECRG00000009971) alas2 (ENSECRG00000009985) fam50a (ENSECRG00000010024) ##22 ENSECRG00000010052 plxna3 (ENSECRG00000010081) #23 ENSECRG00000010126 ##18 ENSECRG00000010140 ENSECRG00000010150 syn1 (ENSECRG00000010162) ENSECRG00000010182 araf (ENSECRG00000010197) imp4 (ENSECRG00000010219) ENSECRG00000010237 ENSECRG00000010305 l1cama (ENSECRG00000010406) #7 AVPR2 (ENSECRG00000010459) #8 cav4b (ENSECRG00000010466) ENSECRG00000010474