Chordata ANCESTRAL SPECIES ENSGT00390000004735.A #22 Vertebrata ANCESTRAL SPECIES ENSGT00390000004735.A #22 Gnathostomata ANCESTRAL SPECIES ENSGT00390000004735.A #22 Euteleostomi ANCESTRAL SPECIES ENSGT00390000004735.A #22 Sarcopterygii ANCESTRAL SPECIES ENSGT00390000004735.A #22 Tetrapoda ANCESTRAL SPECIES ENSGT00390000004735.A #22 Amniota ANCESTRAL SPECIES ENSGT00390000004735.A #22 Mammalia ANCESTRAL SPECIES ENSGT00390000004735.A #22 Theria ANCESTRAL SPECIES ENSGT00390000004735.A #22 Eutheria ANCESTRAL SPECIES ENSGT00390000004735.A #22 Boreoeutheria ANCESTRAL SPECIES 11 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00910000146917 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00410000025802.h ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.e.b ENSGT00940000163020 Euarchontoglires ANCESTRAL SPECIES 11 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00910000146917 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00410000025802.h ##24 ENSGT01030000238159 ENSGT01050000244815.B.a.a ENSGT00410000025802.g.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 Primates ANCESTRAL SPECIES 23 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00910000146917 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00410000025802.h ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.e.b ENSGT00940000163020 Haplorrhini ANCESTRAL SPECIES 33 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00910000146917 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00410000025802.h ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00940000163020 Simiiformes ANCESTRAL SPECIES 9 ENSGT00390000011272 ENSGT00940000160502 ENSGT00910000146917 ENSGT00910000147052 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00410000025802.h.a ##24 ENSGT00410000025802.h.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 Catarrhini ANCESTRAL SPECIES 12 ENSGT00940000160502 ENSGT00910000146917 ENSGT00910000147052 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.a.b.e.a ##17 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a.m #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00390000002566 ENSGT00410000025802.h.a.a ##24 ENSGT00410000025802.h.a.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Cercopithecidae ANCESTRAL SPECIES 37 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a.m #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00910000147580 ENSGT00530000063808.a ENSGT00390000002566 ENSGT00410000025802.h.a.a ##24 ENSGT00410000025802.h.a.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 Cercopithecinae ANCESTRAL SPECIES 25 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a.m #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00910000147580 ENSGT00530000063808.a ENSGT00390000002566 ENSGT00410000025802.h.a.a ##24 ENSGT00410000025802.h.a.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 Cercopithecinae_a ANCESTRAL SPECIES 11 ENSGT00390000011272 ENSGT00940000160502 ENSGT00910000146917 ENSGT00910000147052 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00390000002034 #15 ENSGT00940000153588.b #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a.m #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00910000147580 ENSGT00530000063808.a ENSGT00390000002566 ENSGT00410000025802.h.a.a ##24 ENSGT00410000025802.h.a.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 Macaca ANCESTRAL SPECIES 13 ENSGT00390000011272 ENSGT00940000160502 ENSGT00910000146917 ENSGT00910000147052 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00390000002034 #15 ENSGT00940000153588.b #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a.m #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00390000002566 ENSGT00410000025802.h.a.a ##24 ENSGT00410000025802.h.a.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Pig-tailed macaque MODERN SPECIES 403 TEX28 (ENSMNEG00000032132) #13 TKTL1 (ENSMNEG00000045070) #14 EMD (ENSMNEG00000042917) #15 FLNA (ENSMNEG00000040468) #16 ENSMNEG00000038094 #17 DNASE1L1 (ENSMNEG00000032874) #18 TAFAZZIN (ENSMNEG00000038446) #19 ATP6AP1 (ENSMNEG00000040534) #20 GDI1 (ENSMNEG00000029142) #21 FAM50A (ENSMNEG00000033378) #22 PLXNA3 (ENSMNEG00000029520) #23 LAGE3 (ENSMNEG00000044542) #24 UBL4A (ENSMNEG00000039513) #25 SLC10A3 (ENSMNEG00000042913) #26 FAM3A (ENSMNEG00000034258) #27 G6PD (ENSMNEG00000031229) #28 Macaca_a ANCESTRAL SPECIES 11 ENSGT00390000013740 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00390000002034 #15 ENSGT00940000153588.b #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a.m #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.b.a.b.b.b ENSGT00530000063808.a ENSGT00410000025802.h.a.a ##24 ENSGT00410000025802.h.a.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Rhesus MODERN SPECIES 327 TMEM187 (ENSMMUG00000005132) IRAK1 (ENSMMUG00000018703) MECP2 (ENSMMUG00000018704) ENSMMUG00000006166 ENSMMUG00000055487 #13 ENSMMUG00000054361 ENSMMUG00000050314 #13 TKTL1 (ENSMMUG00000013667) #14 EMD (ENSMMUG00000013678) #15 FLNA (ENSMMUG00000013668) #16 RPL10 (ENSMMUG00000005494) #17 DNASE1L1 (ENSMMUG00000050873) #18 TAFAZZIN (ENSMMUG00000005498) #19 ATP6AP1 (ENSMMUG00000005501) #20 GDI1 (ENSMMUG00000005502) #21 FAM50A (ENSMMUG00000005505) #22 PLXNA3 (ENSMMUG00000005507) #23 LAGE3 (ENSMMUG00000040340) #24 UBL4A (ENSMMUG00000009015) #26 ENSMMUG00000063935 FAM3A (ENSMMUG00000009012) #27 G6PD (ENSMMUG00000017409) #28 ENSMMUG00000052573 ##24 ENSMMUG00000017405 ##24 ENSMMUG00000051483 IKBKG (ENSMMUG00000017277) ENSMMUG00000051337 ENSMMUG00000045112 ##24 GAB3 (ENSMMUG00000015190) DKC1 (ENSMMUG00000005768) MPP1 (ENSMMUG00000005772) Crab-eating macaque MODERN SPECIES 175 HCFC1 (ENSMFAG00000035763) IRAK1 (ENSMFAG00000042818) MECP2 (ENSMFAG00000033178) ENSMFAG00000049901 ENSMFAG00000043960 ENSMFAG00000039596 #13 ENSMFAG00000059786 #13 TKTL1 (ENSMFAG00000031072) #14 EMD (ENSMFAG00000045316) #15 FLNA (ENSMFAG00000035790) #16 ENSMFAG00000040824 ##17 DNASE1L1 (ENSMFAG00000038787) #18 TAFAZZIN (ENSMFAG00000028691) #19 ATP6AP1 (ENSMFAG00000003619) #20 GDI1 (ENSMFAG00000037198) #21 FAM50A (ENSMFAG00000021581) #22 PLXNA3 (ENSMFAG00000040837) #23 LAGE3 (ENSMFAG00000004038) #24 UBL4A (ENSMFAG00000000884) #25 SLC10A3 (ENSMFAG00000035989) #26 FAM3A (ENSMFAG00000041814) #27 G6PD (ENSMFAG00000043207) #28 IKBKG (ENSMFAG00000032230) ENSMFAG00000060522 F8 (ENSMFAG00000039948) FUNDC2 (ENSMFAG00000038031) ENSMFAG00000045993 MTCP1 (ENSMFAG00000052287) BRCC3 (ENSMFAG00000031106) ENSMFAG00000056611 VBP1 (ENSMFAG00000032032) Cercopithecinae_b ANCESTRAL SPECIES 51 ENSGT00390000003897.s.b.a.a.b.e.a ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a.m #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00910000147580 ENSGT00530000063808.a ENSGT00390000002566 ENSGT00390000002034 #15 ENSGT00940000153588.b #16 ENSGT00940000162426 #14 ENSGT00940000162843 #13 ENSGT01030000234549.a.a.a.b ENSGT00530000063687.b.b.b Cercopithecinae_d ANCESTRAL SPECIES 195 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a.m #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00910000147580 ENSGT00530000063808.a ENSGT00390000002566 Drill MODERN SPECIES 361 ENSMLEG00000025660 #17 DNASE1L1 (ENSMLEG00000042325) #18 TAFAZZIN (ENSMLEG00000041537) #19 ATP6AP1 (ENSMLEG00000026333) #20 GDI1 (ENSMLEG00000014459) #21 FAM50A (ENSMLEG00000034206) #22 PLXNA3 (ENSMLEG00000039715) #23 LAGE3 (ENSMLEG00000031787) #24 UBL4A (ENSMLEG00000029271) #25 SLC10A3 (ENSMLEG00000031363) #26 FAM3A (ENSMLEG00000031424) #27 G6PD (ENSMLEG00000040869) #28 IKBKG (ENSMLEG00000032380) ENSMLEG00000037003 ENSMLEG00000009651 Sooty mangabey MODERN SPECIES 567 ENSCATG00000030970 #17 DNASE1L1 (ENSCATG00000014042) #18 TAFAZZIN (ENSCATG00000034866) #19 ATP6AP1 (ENSCATG00000039938) #20 GDI1 (ENSCATG00000031684) #21 FAM50A (ENSCATG00000032169) #22 PLXNA3 (ENSCATG00000031009) #23 LAGE3 (ENSCATG00000025654) #24 UBL4A (ENSCATG00000036850) #25 SLC10A3 (ENSCATG00000032881) #26 FAM3A (ENSCATG00000022515) #27 G6PD (ENSCATG00000009953) #28 ENSCATG00000021841 Vervet Monkey MODERN SPECIES 197 DNASE1L1 (ENSCSAG00000017731) #18 TAFAZZIN (ENSCSAG00000017730) #19 ATP6AP1 (ENSCSAG00000017725) #20 GDI1 (ENSCSAG00000017723) #21 FAM50A (ENSCSAG00000017718) #22 Rhinopithecus ANCESTRAL SPECIES 316 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a.m #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00910000147580 ENSGT00530000063808.a ENSGT00390000002566 ENSGT00410000025802.h.a.a ##24 ENSGT00410000025802.h.a.b ##24 Black snub-nosed monkey MODERN SPECIES 1888 ENSRBIG00000037040 #15 ENSRBIG00000039019 #16 ENSRBIG00000042996 #17 DNASE1L1 (ENSRBIG00000030074) #18 TAFAZZIN (ENSRBIG00000035066) #19 ATP6AP1 (ENSRBIG00000036700) #20 GDI1 (ENSRBIG00000042799) #21 FAM50A (ENSRBIG00000037965) #22 PLXNA3 (ENSRBIG00000035203) #23 ENSRBIG00000034128 UBL4A (ENSRBIG00000023877) #25 SLC10A3 (ENSRBIG00000034698) #26 FAM3A (ENSRBIG00000025198) #27 ENSRBIG00000028634 G6PD (ENSRBIG00000030157) #28 ENSRBIG00000029055 IKBKG (ENSRBIG00000031684) ENSRBIG00000027585 ENSRBIG00000030147 ##24 Golden snub-nosed monkey MODERN SPECIES 1454 ENSRROG00000019247 #17 DNASE1L1 (ENSRROG00000037526) #18 TAFAZZIN (ENSRROG00000037988) #19 ATP6AP1 (ENSRROG00000026809) #20 FAM50A (ENSRROG00000038239) #22 PLXNA3 (ENSRROG00000044893) #23 LAGE3 (ENSRROG00000012840) #24 UBL4A (ENSRROG00000006560) #25 SLC10A3 (ENSRROG00000044112) #26 FAM3A (ENSRROG00000043376) #27 ENSRROG00000033119 G6PD (ENSRROG00000033216) #28 IKBKG (ENSRROG00000008677) ENSRROG00000035084 ENSRROG00000013818 ENSRROG00000034699 ##24 CTAG2 (ENSRROG00000025938) ##24 Hominoidea ANCESTRAL SPECIES 29 ENSGT00390000011272 ENSGT00940000160502 ENSGT00910000146917 ENSGT00910000147052 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.a.b.e.a ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a.m #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00390000002566 ENSGT00410000025802.h.a.a ##24 ENSGT00410000025802.h.a.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Hominidae ANCESTRAL SPECIES 8 ENSGT00940000160502 ENSGT00910000146917 ENSGT00910000147052 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b.f ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00390000003897.s.b.a.a.b.f ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a.m #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00390000002566 ENSGT00410000025802.h.a.a ##24 ENSGT00410000025802.h.b.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Orangutan MODERN SPECIES 242 RENBP (ENSPPYG00000020862) HCFC1 (ENSPPYG00000020863) TMEM187 (ENSPPYG00000020864) IRAK1 (ENSPPYG00000020865) MECP2 (ENSPPYG00000020866) ENSPPYG00000020867 TEX28 (ENSPPYG00000020869) #13 TKTL1 (ENSPPYG00000020870) #14 FLNA (ENSPPYG00000020871) #16 EMD (ENSPPYG00000020873) #15 RPL10 (ENSPPYG00000020874) #17 DNASE1L1 (ENSPPYG00000020875) #18 TAFAZZIN (ENSPPYG00000020876) #19 ATP6AP1 (ENSPPYG00000020877) #20 GDI1 (ENSPPYG00000020878) #21 FAM50A (ENSPPYG00000020879) #22 LAGE3 (ENSPPYG00000033247) #24 UBL4A (ENSPPYG00000020882) #25 SLC10A3 (ENSPPYG00000020883) #26 FAM3A (ENSPPYG00000020884) #27 G6PD (ENSPPYG00000020885) #28 IKBKG (ENSPPYG00000020886) ENSPPYG00000020887 ENSPPYG00000020888 ##24 CTAG2 (ENSPPYG00000020890) ##24 GAB3 (ENSPPYG00000020891) DKC1 (ENSPPYG00000020892) MPP1 (ENSPPYG00000020893) SMIM9 (ENSPPYG00000020894) F8 (ENSPPYG00000020895) ENSPPYG00000035928 Homo/Pan/Gorilla group ANCESTRAL SPECIES 9 ENSGT00910000146917 ENSGT00910000147052 ENSGT00530000063687.b.b.b.e ENSGT01030000234549.a.a.a.b.f ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.a.b.e.a ##17 ENSGT00530000063687.b.b.b.f ENSGT00390000003897.s.b.a.a.b.f ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a.m #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a.i #28 ENSGT00530000063808.a ENSGT00410000025802.h.a.a ##24 ENSGT00410000025802.h.b.a ##24 ENSGT00530000063801.a.n ENSGT00410000025802.h.b.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 Gorilla MODERN SPECIES 523 TMEM187 (ENSGGOG00000008146) IRAK1 (ENSGGOG00000000220) ENSGGOG00000040298 ENSGGOG00000041822 MECP2 (ENSGGOG00000042467) ENSGGOG00000004184 TEX28 (ENSGGOG00000004188) #13 TKTL1 (ENSGGOG00000004191) #14 FLNA (ENSGGOG00000004199) #16 EMD (ENSGGOG00000009388) #15 ENSGGOG00000000131 ##17 DNASE1L1 (ENSGGOG00000000132) #18 TAZ (ENSGGOG00000011947) #19 ATP6AP1 (ENSGGOG00000013466) #20 GDI1 (ENSGGOG00000013474) #21 ENSGGOG00000013484 #22 PLXNA3 (ENSGGOG00000013493) #23 LAGE3 (ENSGGOG00000013507) #24 ENSGGOG00000013509 #25 SLC10A3 (ENSGGOG00000013520) #26 ENSGGOG00000005270 #27 G6PD (ENSGGOG00000004890) #28 IKBKG (ENSGGOG00000004896) ENSGGOG00000025927 ENSGGOG00000040976 ENSGGOG00000022830 ##24 ENSGGOG00000043272 ##24 ENSGGOG00000025843 GAB3 (ENSGGOG00000001042) DKC1 (ENSGGOG00000001045) MPP1 (ENSGGOG00000001049) Homo/Pan group ANCESTRAL SPECIES 9 ENSGT00910000146917 ENSGT00910000147052 ENSGT00530000063687.b.b.b.e ENSGT01030000234549.a.a.a.b.f ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.b ##17 ENSGT00530000063687.b.b.b.f ENSGT00390000003897.s.b.a.a.b.f ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a.m #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a.i #28 ENSGT00530000063808.a ENSGT00410000025802.h.a.a ##24 ENSGT00410000025802.h.b.a ##24 ENSGT00530000063801.a.n ENSGT00410000025802.h.b.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 Pan ANCESTRAL SPECIES 43 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a.m #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a.i #28 ENSGT00530000063808.a ENSGT00390000002566 ENSGT00410000025802.h.b.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000011549.e ENSGT00390000005685 ENSGT00940000160294 Chimpanzee MODERN SPECIES 972 RENBP (ENSPTRG00000022420) HCFC1 (ENSPTRG00000022421) ENSPTRG00000022422 IRAK1 (ENSPTRG00000022423) ENSPTRG00000046201 ENSPTRG00000047302 MECP2 (ENSPTRG00000048003) OPN1LW (ENSPTRG00000022427) TEX28 (ENSPTRG00000022426) #13 TKTL1 (ENSPTRG00000022429) #14 RPL10 (ENSPTRG00000043378) ##17 DNASE1L1 (ENSPTRG00000042704) #18 TAFAZZIN (ENSPTRG00000022434) #19 ATP6AP1 (ENSPTRG00000022435) #20 GDI1 (ENSPTRG00000028169) #21 FAM50A (ENSPTRG00000022437) #22 PLXNA3 (ENSPTRG00000022438) #23 LAGE3 (ENSPTRG00000022439) #24 UBL4A (ENSPTRG00000022440) #25 SLC10A3 (ENSPTRG00000051548) #26 FAM3A (ENSPTRG00000022442) #27 G6PD (ENSPTRG00000022443) #28 IKBKG (ENSPTRG00000040677) ENSPTRG00000050406 ENSPTRG00000044790 ENSPTRG00000022445 ##24 ENSPTRG00000040429 ##24 ENSPTRG00000043176 ENSPTRG00000052333 ENSPTRG00000045486 ENSPTRG00000022446 ##24 Bonobo MODERN SPECIES 369 L1CAM (ENSPPAG00000042079) AVPR2 (ENSPPAG00000034862) ARHGAP4 (ENSPPAG00000039545) ENSPPAG00000037021 RENBP (ENSPPAG00000035978) HCFC1 (ENSPPAG00000044057) TMEM187 (ENSPPAG00000007444) IRAK1 (ENSPPAG00000040186) ENSPPAG00000042175 MECP2 (ENSPPAG00000034020) ENSPPAG00000034160 ##17 DNASE1L1 (ENSPPAG00000012889) #18 TAFAZZIN (ENSPPAG00000036682) #19 ATP6AP1 (ENSPPAG00000036293) #20 GDI1 (ENSPPAG00000027756) #21 ENSPPAG00000043116 #22 PLXNA3 (ENSPPAG00000037363) #23 LAGE3 (ENSPPAG00000028018) #24 ENSPPAG00000035975 #25 SLC10A3 (ENSPPAG00000036137) #26 ENSPPAG00000028567 #27 G6PD (ENSPPAG00000030117) #28 IKBKG (ENSPPAG00000019041) ENSPPAG00000024171 ENSPPAG00000030022 ##24 GAB3 (ENSPPAG00000033506) DKC1 (ENSPPAG00000023820) MPP1 (ENSPPAG00000040588) ENSPPAG00000031767 SMIM9 (ENSPPAG00000035097) F8 (ENSPPAG00000033513) Human MODERN SPECIES 1827 IRAK1 (ENSG00000184216) MECP2 (ENSG00000169057) OPN1LW (ENSG00000102076) OPN1MW (ENSG00000268221) OPN1MW2 (ENSG00000166160) OPN1MW3 (ENSG00000269433) TEX28 (ENSG00000278057) #13 TKTL1 (ENSG00000007350) #14 FLNA (ENSG00000196924) #16 EMD (ENSG00000102119) #15 RPL10 (ENSG00000147403) ##17 DNASE1L1 (ENSG00000013563) #18 TAFAZZIN (ENSG00000102125) #19 ATP6AP1 (ENSG00000071553) #20 GDI1 (ENSG00000203879) #21 FAM50A (ENSG00000071859) #22 PLXNA3 (ENSG00000130827) #23 LAGE3 (ENSG00000196976) #24 UBL4A (ENSG00000102178) #25 SLC10A3 (ENSG00000126903) #26 FAM3A (ENSG00000071889) #27 G6PD (ENSG00000160211) #28 IKBKG (ENSG00000269335) CTAG1A (ENSG00000268651) ##24 CTAG1B (ENSG00000184033) ##24 CTAG2 (ENSG00000126890) ##24 GAB3 (ENSG00000160219) DKC1 (ENSG00000130826) MPP1 (ENSG00000130830) SMIM9 (ENSG00000203870) F8 (ENSG00000185010) Gibbon MODERN SPECIES 449 ENSNLEG00000013753 HCFC1 (ENSNLEG00000026624) TMEM187 (ENSNLEG00000013763) ENSNLEG00000013767 ENSNLEG00000013783 ENSNLEG00000013787 TEX28 (ENSNLEG00000013808) #13 TKTL1 (ENSNLEG00000013813) #14 FLNA (ENSNLEG00000013842) #16 EMD (ENSNLEG00000014117) #15 ENSNLEG00000028143 ##17 DNASE1L1 (ENSNLEG00000014149) #18 ENSNLEG00000014176 #19 ATP6AP1 (ENSNLEG00000014184) #20 GDI1 (ENSNLEG00000014222) #21 FAM50A (ENSNLEG00000014266) #22 PLXNA3 (ENSNLEG00000014273) #23 LAGE3 (ENSNLEG00000028687) #24 ENSNLEG00000014292 #25 SLC10A3 (ENSNLEG00000014293) #26 FAM3A (ENSNLEG00000030950) #27 ENSNLEG00000014300 #28 ENSNLEG00000014311 GAB3 (ENSNLEG00000014318) DKC1 (ENSNLEG00000014323) MPP1 (ENSNLEG00000014358) ENSNLEG00000014423 ENSNLEG00000028336 SMIM9 (ENSNLEG00000014424) F8 (ENSNLEG00000014427) ENSNLEG00000018302 Platyrrhini ANCESTRAL SPECIES 42 ENSGT00940000161383 ENSGT00940000160502 ENSGT00910000146917 ENSGT00910000147052 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426.a #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.b.b.n #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00410000025802.h.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647.g Mas night monkey MODERN SPECIES 1311 ENSANAG00000036053 ##17 DNASE1L1 (ENSANAG00000019417) #18 TAFAZZIN (ENSANAG00000022392) #19 ATP6AP1 (ENSANAG00000036139) #20 GDI1 (ENSANAG00000028381) #21 FAM50A (ENSANAG00000031398) #22 PLXNA3 (ENSANAG00000027264) #23 LAGE3 (ENSANAG00000032507) #24 ENSANAG00000029762 #25 SLC10A3 (ENSANAG00000031182) #26 FAM3A (ENSANAG00000028348) #27 G6PD (ENSANAG00000031927) #28 IKBKG (ENSANAG00000032209) GAB3 (ENSANAG00000032427) DKC1 (ENSANAG00000022732) MPP1 (ENSANAG00000034369) F8 (ENSANAG00000025258) ENSANAG00000030681 ENSANAG00000029218 MTCP1 (ENSANAG00000028247) BRCC3 (ENSANAG00000024915) Cebidae ANCESTRAL SPECIES 27 ENSGT00940000161383 ENSGT00940000160502 ENSGT00910000146917 ENSGT00910000147052 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426.a #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.b.b.n #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00410000025802.h.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.e.a.a.a ENSGT00390000012647.g Cebidae_a ANCESTRAL SPECIES 78 ENSGT00940000161383 ENSGT00940000160502 ENSGT00910000146917 ENSGT00910000147052 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426.a #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.b.b.n #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00410000025802.h.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.e.a.a.a ENSGT00390000012647.g Capuchin MODERN SPECIES 862 ENSCCAG00000024992 ##17 DNASE1L1 (ENSCCAG00000038109) #18 TAZ (ENSCCAG00000033091) #19 ATP6AP1 (ENSCCAG00000026799) #20 GDI1 (ENSCCAG00000023267) #21 FAM50A (ENSCCAG00000022089) #22 PLXNA3 (ENSCCAG00000029210) #23 LAGE3 (ENSCCAG00000021965) #24 UBL4A (ENSCCAG00000033285) #25 SLC10A3 (ENSCCAG00000020474) #26 FAM3A (ENSCCAG00000030432) #27 ENSCCAG00000025941 G6PD (ENSCCAG00000033900) #28 IKBKG (ENSCCAG00000030204) ENSCCAG00000030506 ##24 Bolivian squirrel monkey MODERN SPECIES 236 IRAK1 (ENSSBOG00000018599) ENSSBOG00000017747 MECP2 (ENSSBOG00000024999) ENSSBOG00000025722 ENSSBOG00000022236 TEX28 (ENSSBOG00000035728) #13 TKTL1 (ENSSBOG00000020176) #14 FLNA (ENSSBOG00000035541) #16 EMD (ENSSBOG00000027560) #15 ENSSBOG00000025724 #17 DNASE1L1 (ENSSBOG00000028977) #18 ENSSBOG00000033124 TAFAZZIN (ENSSBOG00000029961) #19 ATP6AP1 (ENSSBOG00000027327) #20 GDI1 (ENSSBOG00000021247) #21 FAM50A (ENSSBOG00000029861) #22 PLXNA3 (ENSSBOG00000034877) #23 LAGE3 (ENSSBOG00000024470) #24 UBL4A (ENSSBOG00000030369) #25 SLC10A3 (ENSSBOG00000027728) #26 FAM3A (ENSSBOG00000030279) #27 G6PD (ENSSBOG00000003239) #28 IKBKG (ENSSBOG00000033453) ENSSBOG00000031845 ##24 GAB3 (ENSSBOG00000027441) DKC1 (ENSSBOG00000033746) MPP1 (ENSSBOG00000026026) SMIM9 (ENSSBOG00000018626) F8 (ENSSBOG00000002240) ENSSBOG00000034180 CMC4 (ENSSBOG00000033964) Marmoset MODERN SPECIES 78 AVPR2 (ENSCJAG00000011022) NAA10 (ENSCJAG00000014506) RENBP (ENSCJAG00000014500) IRAK1 (ENSCJAG00000014452) MECP2 (ENSCJAG00000016796) ENSCJAG00000014412 TEX28 (ENSCJAG00000042631) #13 TKTL1 (ENSCJAG00000014368) #14 FLNA (ENSCJAG00000034881) #16 EMD (ENSCJAG00000011853) #15 ENSCJAG00000011822 #17 DNASE1L1 (ENSCJAG00000011800) #18 ENSCJAG00000016995 #19 ATP6AP1 (ENSCJAG00000040642) #20 GDI1 (ENSCJAG00000016910) #21 FAM50A (ENSCJAG00000063509) #22 PLXNA3 (ENSCJAG00000016816) #23 LAGE3 (ENSCJAG00000041329) #24 UBL4A (ENSCJAG00000074416) #25 SLC10A3 (ENSCJAG00000077479) #26 FAM3A (ENSCJAG00000016787) #27 G6PD (ENSCJAG00000016775) #28 IKBKG (ENSCJAG00000016764) GAB3 (ENSCJAG00000016753) ENSCJAG00000082602 DKC1 (ENSCJAG00000004210) MPP1 (ENSCJAG00000004227) SMIM9 (ENSCJAG00000004256) F8 (ENSCJAG00000004258) ENSCJAG00000076498 ENSCJAG00000079192 Tarsier MODERN SPECIES 6918 ATP6AP1 (ENSTSYG00000030854) #20 GDI1 (ENSTSYG00000007275) #21 FAM50A (ENSTSYG00000032985) #22 Strepsirrhini ANCESTRAL SPECIES 45 ENSGT00390000013740 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a Lemuriformes ANCESTRAL SPECIES 60 ENSGT00390000013740 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a Mouse lemur MODERN SPECIES 169 F8 (ENSMICG00000029671) ENSMICG00000037635 ENSMICG00000009653 ENSMICG00000048060 SMIM9 (ENSMICG00000043321) MPP1 (ENSMICG00000002828) ENSMICG00000002818 GAB3 (ENSMICG00000000264) FLNA (ENSMICG00000004663) #16 EMD (ENSMICG00000004682) #15 ENSMICG00000033705 #17 DNASE1L1 (ENSMICG00000035242) #18 TAFAZZIN (ENSMICG00000030766) #19 ATP6AP1 (ENSMICG00000016405) #20 GDI1 (ENSMICG00000016418) #21 FAM50A (ENSMICG00000016428) #22 PLXNA3 (ENSMICG00000016439) #23 UBL4A (ENSMICG00000016459) #25 SLC10A3 (ENSMICG00000016468) #26 FAM3A (ENSMICG00000016470) #27 G6PD (ENSMICG00000016481) #28 IKBKG (ENSMICG00000035937) ENSMICG00000031449 ENSMICG00000041505 ##24 ENSMICG00000028378 ENSMICG00000045052 ENSMICG00000043299 ENSMICG00000044078 ENSMICG00000043090 CXorf66 (ENSMICG00000042583) ATP11C (ENSMICG00000017620) Lemuriformes_a ANCESTRAL SPECIES 110 ENSGT00390000013740 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a Coquerels sifaka DUPLICATION Coquerels sifaka MODERN SPECIES 919 ADRA1A (ENSPCOG00000028770) DPYSL2 (ENSPCOG00000027797) BNIP3L (ENSPCOG00000026018) PPP2R2A (ENSPCOG00000023269) EBF2 (ENSPCOG00000027078) CDCA2 (ENSPCOG00000023393) KCTD9 (ENSPCOG00000020414) GNRH1 (ENSPCOG00000024165) DOCK5 (ENSPCOG00000016268) NEFL (ENSPCOG00000026085) NEFM (ENSPCOG00000022965) ADAM7 (ENSPCOG00000026532) ENSPCOG00000021910 ENSPCOG00000008142 STC1 (ENSPCOG00000019531) ENSPCOG00000026813 #22 NKX2-6 (ENSPCOG00000021761) NKX3-1 (ENSPCOG00000024990) SLC25A37 (ENSPCOG00000028846) ENTPD4 (ENSPCOG00000010184) LOXL2 (ENSPCOG00000022542) R3HCC1 (ENSPCOG00000027554) CHMP7 (ENSPCOG00000007383) ENSPCOG00000000697 RHOBTB2 (ENSPCOG00000015995) PEBP4 (ENSPCOG00000021149) EGR3 (ENSPCOG00000014614) ENSPCOG00000021166 BIN3 (ENSPCOG00000007346) CCAR2 (ENSPCOG00000023051) C8orf58 (ENSPCOG00000019584) Coquerels sifaka MODERN SPECIES 882 ENSPCOG00000027024 RENBP (ENSPCOG00000013414) HCFC1 (ENSPCOG00000028065) TMEM187 (ENSPCOG00000024026) IRAK1 (ENSPCOG00000027349) MECP2 (ENSPCOG00000024848) ENSPCOG00000015866 TKTL1 (ENSPCOG00000023105) #14 FLNA (ENSPCOG00000011059) #16 EMD (ENSPCOG00000015697) #15 ENSPCOG00000027122 #17 DNASE1L1 (ENSPCOG00000022635) #18 TAFAZZIN (ENSPCOG00000023186) #19 ATP6AP1 (ENSPCOG00000015508) #20 GDI1 (ENSPCOG00000015358) #21 ENSPCOG00000024061 #22 PLXNA3 (ENSPCOG00000015843) #23 LAGE3 (ENSPCOG00000027993) #24 UBL4A (ENSPCOG00000022735) #25 SLC10A3 (ENSPCOG00000025772) #26 FAM3A (ENSPCOG00000016869) #27 G6PD (ENSPCOG00000028512) #28 IKBKG (ENSPCOG00000026138) Greater bamboo lemur MODERN SPECIES 1160 FAM50A (ENSPSMG00000000520) #22 ENSPSMG00000000524 #23 ENSPSMG00000000535 #23 LAGE3 (ENSPSMG00000000544) #24 UBL4A (ENSPSMG00000000561) #25 FAM3A (ENSPSMG00000000661) #27 G6PD (ENSPSMG00000000786) #28 IKBKG (ENSPSMG00000000861) Bushbaby MODERN SPECIES 364 TMEM187 (ENSOGAG00000026922) IRAK1 (ENSOGAG00000015108) MECP2 (ENSOGAG00000015115) ENSOGAG00000000897 TEX28 (ENSOGAG00000000900) #13 TKTL1 (ENSOGAG00000000901) #14 ENSOGAG00000027452 ENSOGAG00000017264 FLNA (ENSOGAG00000015265) #16 EMD (ENSOGAG00000029264) #15 ENSOGAG00000000099 #17 DNASE1L1 (ENSOGAG00000000100) #18 TAFAZZIN (ENSOGAG00000008304) #19 ATP6AP1 (ENSOGAG00000008310) #20 GDI1 (ENSOGAG00000008317) #21 FAM50A (ENSOGAG00000008322) #22 PLXNA3 (ENSOGAG00000008330) #23 UBL4A (ENSOGAG00000030091) #25 SLC10A3 (ENSOGAG00000002637) #26 FAM3A (ENSOGAG00000016669) #27 G6PD (ENSOGAG00000033296) #28 IKBKG (ENSOGAG00000024983) ENSOGAG00000031211 ENSOGAG00000027129 ENSOGAG00000032447 Euarchontoglires_A ANCESTRAL SPECIES 11 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00910000146917 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00410000025802.g.b ##24 ENSGT01050000244815.B.a.a ENSGT00390000000062.x.b ENSGT00390000001700.a.b.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 Tree shrew MODERN SPECIES 5638 ATP6AP1 (ENSTBEG00000012179) #20 GDI1 (ENSTBEG00000012540) #21 FAM50A (ENSTBEG00000012739) #22 Glires ANCESTRAL SPECIES 10 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00910000146917 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00410000025802.g.b ##24 ENSGT01050000244815.B.a.a ENSGT00390000000062.x.b ENSGT00390000001700.a.b.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 Lagomorpha ANCESTRAL SPECIES 103 ENSGT00950000182824.a.b.b ENSGT00550000074803 ENSGT00390000013740 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a Pika DUPLICATION Pika DUPLICATION Pika MODERN SPECIES 10627 ENSOPRG00000011292 #22 Pika MODERN SPECIES 5784 ENSOPRG00000014089 #22 Pika MODERN SPECIES 3089 ENSOPRG00000000215 #22 Rabbit MODERN SPECIES 549 NAA10 (ENSOCUG00000001111) RENBP (ENSOCUG00000025840) HCFC1 (ENSOCUG00000001113) TMEM187 (ENSOCUG00000001116) IRAK1 (ENSOCUG00000025860) MECP2 (ENSOCUG00000013147) OPN1MW (ENSOCUG00000011466) TEX28 (ENSOCUG00000021000) #13 TKTL1 (ENSOCUG00000000883) #14 FLNA (ENSOCUG00000000880) #16 EMD (ENSOCUG00000000882) #15 RA_m006_jsm7BED4f (ENSOCUG00000024511) #16 TAFAZZIN (ENSOCUG00000000885) #19 ENSOCUG00000017631 #20 GDI1 (ENSOCUG00000017639) #21 FAM50A (ENSOCUG00000017644) #22 PLXNA3 (ENSOCUG00000015623) #23 LAGE3 (ENSOCUG00000028990) #24 SLC10A3 (ENSOCUG00000022433) #26 FAM3A (ENSOCUG00000015663) #27 G6PD (ENSOCUG00000007866) #28 IKBKG (ENSOCUG00000007873) Rodentia ANCESTRAL SPECIES 10 ENSGT00390000013740 ENSGT00940000161383 ENSGT00940000160502 ENSGT00910000146917 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00410000025802.g.b ##24 ENSGT01050000244815.B.a.a ENSGT00390000000062.x.b ENSGT00390000001700.a.b.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 Rodentia_A ANCESTRAL SPECIES 9 ENSGT00550000074803 ENSGT00390000013740 ENSGT00940000161383 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT01050000244815.B.a.a ENSGT00410000025802.g.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 Sciuridae ANCESTRAL SPECIES 27 ENSGT00550000074803 ENSGT00390000013740 ENSGT00940000161383 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT01050000244815.B.a.a Marmotini DUPLICATION Marmotini ANCESTRAL SPECIES 83 ENSGT00550000074803 ENSGT00390000013740 ENSGT00940000161383 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A.e #22 ENSGT01050000244850.A.a #23 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT01050000244815.B.a.a Alpin marmot MODERN SPECIES 136 ARHGAP4 (ENSMMMG00000008497) ENSMMMG00000009143 RENBP (ENSMMMG00000009149) HCFC1 (ENSMMMG00000009171) IRAK1 (ENSMMMG00000009239) MECP2 (ENSMMMG00000009970) ENSMMMG00000010010 TEX28 (ENSMMMG00000010023) #13 TKTL1 (ENSMMMG00000010036) #14 FLNA (ENSMMMG00000010080) #16 EMD (ENSMMMG00000014270) #15 ENSMMMG00000014279 #17 DNASE1L1 (ENSMMMG00000014299) #18 TAFAZZIN (ENSMMMG00000014302) #19 GDI1 (ENSMMMG00000014475) #21 FAM50A (ENSMMMG00000014490) #22 PLXNA3 (ENSMMMG00000014513) #23 UBL4A (ENSMMMG00000014537) #25 SLC10A3 (ENSMMMG00000014545) #26 FAM3A (ENSMMMG00000014550) #27 G6PD (ENSMMMG00000014645) #28 IKBKG (ENSMMMG00000014671) ENSMMMG00000014778 Marmotini_b ANCESTRAL SPECIES 124 ENSGT00550000074803 ENSGT00390000013740 ENSGT00940000161383 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A.e #22 ENSGT01050000244850.A.a #23 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT01050000244815.B.a.a Squirrel MODERN SPECIES 409 NAA10 (ENSSTOG00000010237) RENBP (ENSSTOG00000010247) HCFC1 (ENSSTOG00000029220) IRAK1 (ENSSTOG00000007991) MECP2 (ENSSTOG00000006094) ENSSTOG00000024701 TEX28 (ENSSTOG00000022078) #13 TKTL1 (ENSSTOG00000005014) #14 FLNA (ENSSTOG00000005036) #16 EMD (ENSSTOG00000014689) #15 ENSSTOG00000011857 #17 DNASE1L1 (ENSSTOG00000011867) #18 TAFAZZIN (ENSSTOG00000011873) #19 ATP6AP1 (ENSSTOG00000004401) #20 GDI1 (ENSSTOG00000004429) #21 ENSSTOG00000004448 #22 PLXNA3 (ENSSTOG00000003432) #23 UBL4A (ENSSTOG00000022150) #25 SLC10A3 (ENSSTOG00000026515) #26 FAM3A (ENSSTOG00000022234) #27 IKBKG (ENSSTOG00000011082) G6PD (ENSSTOG00000021077) #28 ENSSTOG00000027400 Arctic ground squirrel MODERN SPECIES 823 FLNA (ENSUPAG00010000336) #16 EMD (ENSUPAG00010000276) #15 ENSUPAG00010000252 ##17 DNASE1L1 (ENSUPAG00010000232) #18 TAFAZZIN (ENSUPAG00010000055) #19 ATP6AP1 (ENSUPAG00010011086) #20 GDI1 (ENSUPAG00010011085) #21 ENSUPAG00010011078 #22 PLXNA3 (ENSUPAG00010011001) #23 ENSUPAG00010010993 ENSUPAG00010010991 #24 SLC10A3 (ENSUPAG00010010974) #26 FAM3A (ENSUPAG00010010917) #27 IKBKG (ENSUPAG00010010819) ENSUPAG00010010808 ENSUPAG00010010804 ENSUPAG00010010787 ENSUPAG00010010780 ##24 ENSUPAG00010010746 ##24 Marmotini ANCESTRAL SPECIES ENSGT00390000004735.A.f #22 Marmotini_b DUPLICATION Marmotini_b ANCESTRAL SPECIES ENSGT00390000004735.A.f.a #22 Squirrel DUPLICATION Squirrel MODERN SPECIES 430 ENSSTOG00000030695 #22 Squirrel MODERN SPECIES 538 ENSSTOG00000034161 #22 Arctic ground squirrel MODERN SPECIES 686 ENSUPAG00010003770 SLC25A24 (ENSUPAG00010003749) ENSUPAG00010003655 ENSUPAG00010003644 #22 Marmotini_b ANCESTRAL SPECIES ENSGT00390000004735.A.f.b #22 Squirrel MODERN SPECIES 331 PRMT6 (ENSSTOG00000010675) NTNG1 (ENSSTOG00000004945) VAV3 (ENSSTOG00000004968) SLC25A24 (ENSSTOG00000025446) ENSSTOG00000024778 ENSSTOG00000026658 #22 ENSSTOG00000020565 Arctic ground squirrel MODERN SPECIES 1104 ENSUPAG00010000264 #22 Eurasian red squirrel MODERN SPECIES 156 RENBP (ENSSVLG00005019023) HCFC1 (ENSSVLG00005018524) ENSSVLG00005018093 MECP2 (ENSSVLG00005017899) ENSSVLG00005017793 ENSSVLG00005017738 TEX28 (ENSSVLG00005017596) #13 TKTL1 (ENSSVLG00005017318) #14 EMD (ENSSVLG00005019520) #15 FLNA (ENSSVLG00005018546) #16 ENSSVLG00005018375 #17 DNASE1L1 (ENSSVLG00005018343) #18 TAFAZZIN (ENSSVLG00005018196) #19 ATP6AP1 (ENSSVLG00005018016) #20 GDI1 (ENSSVLG00005017962) #21 FAM50A (ENSSVLG00005017921) #22 PLXNA3 (ENSSVLG00005017881) #23 LAGE3 (ENSSVLG00005017858) #24 UBL4A (ENSSVLG00005017819) #25 SLC10A3 (ENSSVLG00005017774) #26 FAM3A (ENSSVLG00005017584) #27 G6PD (ENSSVLG00005017520) #28 IKBKG (ENSSVLG00005017293) ENSSVLG00005017218 ENSSVLG00005017166 ENSSVLG00005017122 ENSSVLG00005017050 ##24 ENSSVLG00005016985 GAB3 (ENSSVLG00005016708) DKC1 (ENSSVLG00005016642) MPP1 (ENSSVLG00005016498) Rodentia_B ANCESTRAL SPECIES 16 ENSGT00390000013740 ENSGT00940000161383 ENSGT00940000160502 ENSGT00910000146917 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00410000025802.g.b ##24 ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Kangaroo rat MODERN SPECIES 526 Arhgap4 (ENSDORG00000002750) Naa10 (ENSDORG00000002753) Renbp (ENSDORG00000002755) Hcfc1 (ENSDORG00000002756) Irak1 (ENSDORG00000013876) Mecp2 (ENSDORG00000014978) Opn1mw (ENSDORG00000026454) Tex28 (ENSDORG00000010136) #13 Tktl1 (ENSDORG00000013785) #14 Emd (ENSDORG00000004375) #15 Flna (ENSDORG00000004370) #16 ENSDORG00000004369 #17 Tafazzin (ENSDORG00000029677) #19 Atp6ap1 (ENSDORG00000008847) #20 Gdi1 (ENSDORG00000008848) #21 Fam50a (ENSDORG00000008851) #22 Plxna3 (ENSDORG00000000853) #23 Lage3 (ENSDORG00000029875) #24 Ubl4a (ENSDORG00000005196) #25 Slc10a3 (ENSDORG00000005197) #26 Fam3a (ENSDORG00000025173) #27 ENSDORG00000012731 #28 Ikbkg (ENSDORG00000028140) ENSDORG00000000625 ##24 Gab3 (ENSDORG00000006809) ENSDORG00000013566 Mpp1 (ENSDORG00000013568) ENSDORG00000024019 F8 (ENSDORG00000013155) ENSDORG00000028874 Fundc2 (ENSDORG00000013156) Myomorpha ANCESTRAL SPECIES 6 ENSGT00390000013740 ENSGT00940000161383 ENSGT00940000160502 ENSGT00910000146917 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00410000025802.g.b ##24 ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Lesser Egyptian jerboa MODERN SPECIES 224 Naa10 (ENSJJAG00000023398) Renbp (ENSJJAG00000010739) Hcfc1 (ENSJJAG00000012815) Irak1 (ENSJJAG00000013849) Mecp2 (ENSJJAG00000022463) ENSJJAG00000022596 Opn1mw (ENSJJAG00000022699) Tex28 (ENSJJAG00000019769) #13 Tktl1 (ENSJJAG00000010328) #14 Flna (ENSJJAG00000015450) #16 Emd (ENSJJAG00000019656) #15 ENSJJAG00000014235 ##17 Tafazzin (ENSJJAG00000015233) #19 ENSJJAG00000019557 #20 Gdi1 (ENSJJAG00000008815) #21 Fam50a (ENSJJAG00000010389) #22 Plxna3 (ENSJJAG00000020257) #23 Lage3 (ENSJJAG00000022478) #24 ENSJJAG00000022788 #25 Slc10a3 (ENSJJAG00000022929) #26 Fam3a (ENSJJAG00000023156) #27 ENSJJAG00000023806 #28 Ikbkg (ENSJJAG00000023964) Muroidea ANCESTRAL SPECIES 13 ENSGT00390000013740 ENSGT00940000161383 ENSGT00940000160502 ENSGT00910000146917 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00410000025802.g.b ##24 ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Upper Galilee mountains blind mole rat MODERN SPECIES 660 Arhgap4 (ENSNGAG00000015413) Naa10 (ENSNGAG00000020303) Renbp (ENSNGAG00000021686) Hcfc1 (ENSNGAG00000013083) Irak1 (ENSNGAG00000011647) Mecp2 (ENSNGAG00000009171) Opn1mw (ENSNGAG00000011604) Tex28 (ENSNGAG00000023701) #13 Flna (ENSNGAG00000013524) #16 Emd (ENSNGAG00000018770) #15 ENSNGAG00000023746 #17 Dnase1l1 (ENSNGAG00000024155) #18 Tafazzin (ENSNGAG00000008680) #19 Atp6ap1 (ENSNGAG00000021512) #20 Gdi1 (ENSNGAG00000023333) #21 Fam50a (ENSNGAG00000021495) #22 ENSNGAG00000012608 Plxna3 (ENSNGAG00000022548) #23 Lage3 (ENSNGAG00000023293) #24 Ubl4a (ENSNGAG00000023782) #25 Slc10a3 (ENSNGAG00000007975) #26 Fam3a (ENSNGAG00000016683) #27 ENSNGAG00000020668 #28 Ikbkg (ENSNGAG00000019535) ENSNGAG00000024034 ##24 Or13ae2 (ENSNGAG00000001537) Muroidea_A ANCESTRAL SPECIES 7 ENSGT00390000013740 ENSGT00940000161383 ENSGT00940000160502 ENSGT00910000146917 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00410000025802.g.b.q.a ##24 ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Cricetidae ANCESTRAL SPECIES 8 ENSGT00390000013740 ENSGT00940000161383 ENSGT00940000160502 ENSGT00910000146917 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00410000025802.g.b.q.a ##24 ENSGT01100000263574.b.j ENSGT01050000244815.B.a.a ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Cricetinae ANCESTRAL SPECIES 46 ENSGT01050000244882.b.c.b ENSGT00950000182824.a.b.b ENSGT00550000074803 ENSGT00940000161383 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT01050000244815.B.a.a ENSGT00410000025802.g.b.q.a ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f.db.b Chinese hamster chok1gshd MODERN SPECIES 16 Naa10 (ENSCGRG00001012595) Hcfc1 (ENSCGRG00001019535) Irak1 (ENSCGRG00001013928) ENSCGRG00001022957 Mecp2 (ENSCGRG00001017650) Opn1mw (ENSCGRG00001024157) Tex28 (ENSCGRG00001014288) #13 ENSCGRG00001010950 Flna (ENSCGRG00001013154) #16 Emd (ENSCGRG00001023962) #15 ENSCGRG00001008387 #17 DNASE1L1 (ENSCGRG00001019882) #18 TAZ (ENSCGRG00001016189) #19 Atp6ap1 (ENSCGRG00001015351) #20 Gdi1 (ENSCGRG00001020747) #21 Fam50a (ENSCGRG00001022147) #22 Plxna3 (ENSCGRG00001018950) #23 Lage3 (ENSCGRG00001006943) #24 Ubl4a (ENSCGRG00001024649) #25 Fam3a (ENSCGRG00001017590) #27 G6PDH (ENSCGRG00001009805) #28 Ikbkg (ENSCGRG00001023852) Or7r1 (ENSCGRG00001002331) ENSCGRG00001018213 ENSCGRG00001000852 ##24 Gab3 (ENSCGRG00001024780) ENSCGRG00001014574 Mpp1 (ENSCGRG00001000334) Smim9 (ENSCGRG00001020847) F8 (ENSCGRG00001018172) Fundc2 (ENSCGRG00001005074) Golden Hamster MODERN SPECIES 857 L1cam (ENSMAUG00000008575) Avpr2 (ENSMAUG00000001098) Arhgap4 (ENSMAUG00000020011) Naa10 (ENSMAUG00000019021) Hcfc1 (ENSMAUG00000018495) Irak1 (ENSMAUG00000002430) Mecp2 (ENSMAUG00000018195) Opn1mw (ENSMAUG00000017549) Tex28 (ENSMAUG00000011775) #13 Emd (ENSMAUG00000016655) #15 ENSMAUG00000013615 #17 Dnase1l1 (ENSMAUG00000005714) #18 Tafazzin (ENSMAUG00000001836) #19 Atp6ap1 (ENSMAUG00000014514) #20 Gdi1 (ENSMAUG00000001476) #21 Fam50a (ENSMAUG00000020359) #22 Plxna3 (ENSMAUG00000019645) #23 Lage3 (ENSMAUG00000021750) #24 Ubl4a (ENSMAUG00000019612) #25 Slc10a3 (ENSMAUG00000005496) #26 Fam3a (ENSMAUG00000009961) #27 ENSMAUG00000008547 #28 Ikbkg (ENSMAUG00000008491) Cricetidae_B ANCESTRAL SPECIES 28 ENSGT00390000013740 ENSGT00940000161383 ENSGT00940000160502 ENSGT00910000146917 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00410000025802.g.b.q.a ##24 ENSGT01100000263574.b.j ENSGT01050000244815.B.a.a ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Prairie vole MODERN SPECIES 168 ENSMOCG00000017630 Tex28 (ENSMOCG00000011491) #13 Flna (ENSMOCG00000007826) #16 Emd (ENSMOCG00000003977) #15 ENSMOCG00000013831 #17 Dnase1l1 (ENSMOCG00000017402) #18 Tafazzin (ENSMOCG00000010108) #19 Atp6ap1 (ENSMOCG00000001026) #20 Gdi1 (ENSMOCG00000006575) #21 Fam50a (ENSMOCG00000015890) #22 Plxna3 (ENSMOCG00000002375) #23 ENSMOCG00000002473 #24 Ubl4a (ENSMOCG00000000785) #25 Slc10a3 (ENSMOCG00000008789) #26 Fam3a (ENSMOCG00000016025) #27 ENSMOCG00000015421 #28 Ikbkg (ENSMOCG00000011244) ENSMOCG00000017711 ##24 Or7r1 (ENSMOCG00000002349) Gab3 (ENSMOCG00000015626) ENSMOCG00000001169 Mpp1 (ENSMOCG00000000082) Smim9 (ENSMOCG00000003619) ENSMOCG00000001114 F8 (ENSMOCG00000006178) Northern American deer mouse MODERN SPECIES 475 ENSPEMG00000010870 Hcfc1 (ENSPEMG00000011837) Irak1 (ENSPEMG00000001469) ENSPEMG00000025112 Mecp2 (ENSPEMG00000015115) Opn1mw (ENSPEMG00000010994) Tex28 (ENSPEMG00000009005) #13 Tktl1 (ENSPEMG00000012644) #14 Flna (ENSPEMG00000009562) #16 Emd (ENSPEMG00000012081) #15 ENSPEMG00000015703 ##17 Dnase1l1 (ENSPEMG00000013008) #18 Tafazzin (ENSPEMG00000007822) #19 Atp6ap1 (ENSPEMG00000009724) #20 Gdi1 (ENSPEMG00000010952) #21 Fam50a (ENSPEMG00000001727) #22 Plxna3 (ENSPEMG00000012781) #23 Lage3 (ENSPEMG00000011229) #24 Ubl4a (ENSPEMG00000027881) #25 Fam3a (ENSPEMG00000004757) #27 ENSPEMG00000017532 #28 Ikbkg (ENSPEMG00000031110) ENSPEMG00000029875 ##24 ENSPEMG00000027888 ##24 ENSPEMG00000026245 ##24 Or7r1 (ENSPEMG00000009130) Or13ae2 (ENSPEMG00000025767) Gab3 (ENSPEMG00000012634) Dkc1 (ENSPEMG00000013348) ENSPEMG00000022395 Mpp1 (ENSPEMG00000014261) Murinae ANCESTRAL SPECIES 14 ENSGT00550000074803 ENSGT00390000013740 ENSGT00940000161383 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00410000025802.g.b.q.a ##24 ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00390000016992 ENSGT00390000000062.x.b.k.b ENSGT00390000000062.x.b.l.b ENSGT00390000001700.a.b.b ENSGT00940000159803 Mus ANCESTRAL SPECIES 9 ENSGT00550000074803 ENSGT00390000013740 ENSGT00940000161383 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a.o #28 ENSGT00530000063808.a ENSGT00410000025802.g.b.q.a ##24 ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Mus_A ANCESTRAL SPECIES 15 ENSGT00550000074803 ENSGT00390000013740 ENSGT00940000161383 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a.o #28 ENSGT00530000063808.a ENSGT00410000025802.g.b.q.a ##24 ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00390000000062.x.b.k.b ENSGT00390000000062.x.b.l.b ENSGT00390000001700.a.b.b ENSGT00940000159803 ENSGT00510000047092 Mus_B ANCESTRAL SPECIES 14 ENSGT00550000074803 ENSGT00390000013740 ENSGT00940000161383 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a.o #28 ENSGT00530000063808.a ENSGT00410000025802.g.b.q.a ##24 ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00390000001700.a.b.b.o.a ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 Mus_C ANCESTRAL SPECIES 27 ENSGT00550000074803 ENSGT00390000013740 ENSGT00940000161383 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a.o #28 ENSGT00530000063808.a ENSGT00410000025802.g.b.q.a ##24 ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f spretus MODERN SPECIES 19 Naa10 (MGP_SPRETEiJ_G0034321) Renbp (MGP_SPRETEiJ_G0034322) Hcfc1 (MGP_SPRETEiJ_G0034323) Irak1 (MGP_SPRETEiJ_G0034324) Mecp2 (MGP_SPRETEiJ_G0034325) Opn1mw (MGP_SPRETEiJ_G0034326) Tex28 (MGP_SPRETEiJ_G0034327) #13 Tktl1 (MGP_SPRETEiJ_G0034328) #14 Flna (MGP_SPRETEiJ_G0034329) #16 Emd (MGP_SPRETEiJ_G0034330) #15 MGP_SPRETEiJ_G0034331 #17 Dnase1l1 (MGP_SPRETEiJ_G0034332) #18 Tafazzin (MGP_SPRETEiJ_G0034333) #19 Atp6ap1 (MGP_SPRETEiJ_G0034334) #20 Gdi1 (MGP_SPRETEiJ_G0034335) #21 Fam50a (MGP_SPRETEiJ_G0034336) #22 Plxna3 (MGP_SPRETEiJ_G0034337) #23 Lage3 (MGP_SPRETEiJ_G0034338) #24 Ubl4a (MGP_SPRETEiJ_G0034339) #25 Slc10a3 (MGP_SPRETEiJ_G0034340) #26 Fam3a (MGP_SPRETEiJ_G0034341) #27 Ikbkg (MGP_SPRETEiJ_G0034342) G6pdx (MGP_SPRETEiJ_G0034343) #28 MGP_SPRETEiJ_G0034344 ##24 Or7r1 (MGP_SPRETEiJ_G0034345) Or13ae2 (MGP_SPRETEiJ_G0034346) MGP_SPRETEiJ_G0034347 MGP_SPRETEiJ_G0034348 ##24 Dkc1 (MGP_SPRETEiJ_G0034351) Mpp1 (MGP_SPRETEiJ_G0034352) Smim9 (MGP_SPRETEiJ_G0034353) Steppe mouse MODERN SPECIES 1762 ENSMSIG00000025685 #20 Gdi1 (ENSMSIG00000025652) #21 Fam50a (ENSMSIG00000025621) #22 Plxna3 (ENSMSIG00000025574) #23 Ubl4a (ENSMSIG00000025541) #25 Mouse MODERN SPECIES 37 Naa10 (ENSMUSG00000031388) Renbp (ENSMUSG00000031387) Hcfc1 (ENSMUSG00000031386) Irak1 (ENSMUSG00000031392) Mecp2 (ENSMUSG00000031393) Opn1mw (ENSMUSG00000031394) Tex28 (ENSMUSG00000062564) #13 Tktl1 (ENSMUSG00000031397) #14 Flna (ENSMUSG00000031328) #16 Emd (ENSMUSG00000001964) #15 Rpl10 (ENSMUSG00000008682) ##17 Dnase1l1 (ENSMUSG00000019088) #18 Tafazzin (ENSMUSG00000009995) #19 Atp6ap1 (ENSMUSG00000019087) #20 Gdi1 (ENSMUSG00000015291) #21 Fam50a (ENSMUSG00000001962) #22 Plxna3 (ENSMUSG00000031398) #23 Lage3 (ENSMUSG00000015289) #24 Ubl4a (ENSMUSG00000015290) #25 Slc10a3 (ENSMUSG00000032806) #26 Fam3a (ENSMUSG00000031399) #27 Ikbkg (ENSMUSG00000004221) G6pdx (ENSMUSG00000031400) #28 Ctag2l1 (ENSMUSG00000079536) ##24 Or7r1 (ENSMUSG00000043715) Or13ae2 (ENSMUSG00000051706) Pwwp4c (ENSMUSG00000079534) Ctag2l2 (ENSMUSG00000079532) ##24 Pwwp4d (ENSMUSG00000079531) Gab3 (ENSMUSG00000032750) Dkc1 (ENSMUSG00000031403) Ryukyu mouse MODERN SPECIES 19 Naa10 (MGP_CAROLIEiJ_G0033166) Renbp (MGP_CAROLIEiJ_G0033167) Hcfc1 (MGP_CAROLIEiJ_G0033168) Irak1 (MGP_CAROLIEiJ_G0033169) Mecp2 (MGP_CAROLIEiJ_G0033170) Opn1mw (MGP_CAROLIEiJ_G0033171) Tex28 (MGP_CAROLIEiJ_G0033172) #13 Tktl1 (MGP_CAROLIEiJ_G0033173) #14 Flna (MGP_CAROLIEiJ_G0033174) #16 Emd (MGP_CAROLIEiJ_G0033175) #15 MGP_CAROLIEiJ_G0033176 ##17 Dnase1l1 (MGP_CAROLIEiJ_G0033177) #18 Tafazzin (MGP_CAROLIEiJ_G0033178) #19 Atp6ap1 (MGP_CAROLIEiJ_G0033179) #20 Gdi1 (MGP_CAROLIEiJ_G0033180) #21 Fam50a (MGP_CAROLIEiJ_G0033181) #22 Plxna3 (MGP_CAROLIEiJ_G0033182) #23 Lage3 (MGP_CAROLIEiJ_G0033183) #24 Ubl4a (MGP_CAROLIEiJ_G0033184) #25 Slc10a3 (MGP_CAROLIEiJ_G0033185) #26 Fam3a (MGP_CAROLIEiJ_G0033186) #27 Ikbkg (MGP_CAROLIEiJ_G0033187) G6pdx (MGP_CAROLIEiJ_G0033188) #28 Or7r1 (MGP_CAROLIEiJ_G0033189) Or13ae2 (MGP_CAROLIEiJ_G0033190) Dkc1 (MGP_CAROLIEiJ_G0033191) Mpp1 (MGP_CAROLIEiJ_G0033192) Smim9 (MGP_CAROLIEiJ_G0033193) F8 (MGP_CAROLIEiJ_G0033194) Fundc2 (MGP_CAROLIEiJ_G0033195) Cmc4 (MGP_CAROLIEiJ_G0033196) Shrew mouse MODERN SPECIES 23 Naa10 (MGP_PahariEiJ_G0031709) Renbp (MGP_PahariEiJ_G0031710) Hcfc1 (MGP_PahariEiJ_G0031711) Irak1 (MGP_PahariEiJ_G0031712) Mecp2 (MGP_PahariEiJ_G0031713) Opn1mw (MGP_PahariEiJ_G0031714) Tex28 (MGP_PahariEiJ_G0031715) #13 MGP_PahariEiJ_G0031716 #14 Flna (MGP_PahariEiJ_G0031717) #16 Emd (MGP_PahariEiJ_G0031718) #15 MGP_PahariEiJ_G0031719 ##17 Dnase1l1 (MGP_PahariEiJ_G0031720) #18 Tafazzin (MGP_PahariEiJ_G0031721) #19 Atp6ap1 (MGP_PahariEiJ_G0031722) #20 Gdi1 (MGP_PahariEiJ_G0031723) #21 Fam50a (MGP_PahariEiJ_G0031724) #22 Plxna3 (MGP_PahariEiJ_G0031725) #23 Lage3 (MGP_PahariEiJ_G0031726) #24 Ubl4a (MGP_PahariEiJ_G0031727) #25 Slc10a3 (MGP_PahariEiJ_G0031728) #26 Fam3a (MGP_PahariEiJ_G0031729) #27 Ikbkg (MGP_PahariEiJ_G0031730) G6pdx (MGP_PahariEiJ_G0031731) #28 Or7r1 (MGP_PahariEiJ_G0031732) Or13ae2 (MGP_PahariEiJ_G0031733) Gab3 (MGP_PahariEiJ_G0031734) Dkc1 (MGP_PahariEiJ_G0031735) Mpp1 (MGP_PahariEiJ_G0031736) Smim9 (MGP_PahariEiJ_G0031737) F8 (MGP_PahariEiJ_G0031738) Fundc2 (MGP_PahariEiJ_G0031739) Rat DUPLICATION Rat MODERN SPECIES 46 Renbp (ENSRNOG00000054765) Hcfc1 (ENSRNOG00000051948) Irak1 (ENSRNOG00000060869) Mecp2 (ENSRNOG00000056659) Opn1mw (ENSRNOG00000051529) Tex28 (ENSRNOG00000051438) #13 Tktl1 (ENSRNOG00000055557) #14 Flna (ENSRNOG00000054890) #16 Emd (ENSRNOG00000058882) #15 Rpl10 (ENSRNOG00000056765) #17 Dnase1l1 (ENSRNOG00000055641) #18 ENSRNOG00000063225 Tafazzin (ENSRNOG00000053023) #19 Atp6ap1 (ENSRNOG00000054352) #20 Gdi1 (ENSRNOG00000056870) #21 Fam50a (ENSRNOG00000058439) #22 Plxna3 (ENSRNOG00000060464) #23 Lage3 (ENSRNOG00000053456) Slc10a3 (ENSRNOG00000060580) #26 Ubl4a (ENSRNOG00000053061) #25 Fam3a (ENSRNOG00000060623) #27 G6pd (ENSRNOG00000056728) #28 Ikbkg (ENSRNOG00000060936) LOC690348 (ENSRNOG00000060839) ##24 Or7r1 (ENSRNOG00000058820) LOC120099253 (ENSRNOG00000061511) ##24 ENSRNOG00000067246 Rat MODERN SPECIES 14 Vamp8 (ENSRNOG00000012748) Ggcx (ENSRNOG00000012975) Mat2a (ENSRNOG00000013520) Sh2d6 (ENSRNOG00000013605) Capg (ENSRNOG00000013668) Elmod3 (ENSRNOG00000038102) Retsat (ENSRNOG00000014090) Tgoln2 (ENSRNOG00000014617) Tcf7l1 (ENSRNOG00000014753) Kcmf1 (ENSRNOG00000015097) Tmsb10 (ENSRNOG00000064090) Dnah6 (ENSRNOG00000015581) Suclg1 (ENSRNOG00000005587) Jkampl (ENSRNOG00000024604) Ptbp1-ps3 (ENSRNOG00000070516) ENSRNOG00000071146 #22 ENSRNOG00000066158 Ctnna2 (ENSRNOG00000006003) LRRTM1 (ENSRNOG00000006093) Reg3b (ENSRNOG00000006151) Reg3a (ENSRNOG00000006360) Reg1a (ENSRNOG00000006486) Reg3g (ENSRNOG00000006579) Lrrtm4 (ENSRNOG00000021938) ENSRNOG00000064641 AABR07061254.1 (ENSRNOG00000038024) Gcfc2 (ENSRNOG00000006888) Mrpl19 (ENSRNOG00000006968) Eva1a (ENSRNOG00000007118) ENSRNOG00000063971 Tacr1 (ENSRNOG00000005853) Laurasiatheria ANCESTRAL SPECIES 26 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00910000146917 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00410000025802.h ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 Eulipotyphla ANCESTRAL SPECIES ENSGT00390000004735.A #22 Common shrew MODERN SPECIES 12294 FAM50A (ENSSARG00000006465) #22 Laurasiatheria_a ANCESTRAL SPECIES 10 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00910000146917 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00410000025802.h ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 Artiodactyla ANCESTRAL SPECIES 9 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00910000146917 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT01050000244815.B.a.a ENSGT00410000025802.g.b ##24 ENSGT01030000235238 ENSGT00410000025802.h ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 Suina ANCESTRAL SPECIES 7 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00910000146917 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00390000002034 #15 ENSGT00940000153588.b #16 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a.f #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT01050000244815.B.a.a ENSGT00410000025802.g.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a Chacoan peccary MODERN SPECIES 44 ENSCWAG00000021182 ##17 DNASE1L1 (ENSCWAG00000021201) #18 TAFAZZIN (ENSCWAG00000021221) #19 ATP6AP1 (ENSCWAG00000021247) #20 GDI1 (ENSCWAG00000021263) #21 FAM50A (ENSCWAG00000021283) #22 PLXNA3 (ENSCWAG00000021299) #23 ENSCWAG00000021347 #24 ENSCWAG00000021354 UBL4A (ENSCWAG00000000008) #25 SLC10A3 (ENSCWAG00000000012) #26 FAM3A (ENSCWAG00000000031) #27 G6PD (ENSCWAG00000000077) #28 IKBKG (ENSCWAG00000000145) ENSCWAG00000000203 ENSCWAG00000000223 ENSCWAG00000000236 ##24 GAB3 (ENSCWAG00000000272) DKC1 (ENSCWAG00000000314) MPP1 (ENSCWAG00000000412) SMIM9 (ENSCWAG00000000458) Pig MODERN SPECIES 300 HCFC1 (ENSSSCG00000012793) ENSSSCG00000050581 IRAK1 (ENSSSCG00000012795) ENSSSCG00000059337 MECP2 (ENSSSCG00000034742) ENSSSCG00000029523 TEX28 (ENSSSCG00000029513) #13 TKTL1 (ENSSSCG00000029443) #14 EMD (ENSSSCG00000037777) #15 FLNA (ENSSSCG00000033299) #16 RPL10 (ENSSSCG00000035997) ##17 DNASE1L1 (ENSSSCG00000037032) #18 TAFAZZIN (ENSSSCG00000039655) #19 ATP6AP1 (ENSSSCG00000037310) #20 GDI1 (ENSSSCG00000030421) #21 FAM50A (ENSSSCG00000025303) #22 PLXNA3 (ENSSSCG00000023483) #23 ENSSSCG00000032959 #24 ENSSSCG00000057536 #25 SLC10A3 (ENSSSCG00000025766) #26 FAM3A (ENSSSCG00000028934) #27 G6PD (ENSSSCG00000025108) #28 IKBKG (ENSSSCG00000012825) ENSSSCG00000012827 ENSSSCG00000049540 ##24 GAB3 (ENSSSCG00000012824) DKC1 (ENSSSCG00000012823) F8 (ENSSSCG00000012822) SMIM9 (ENSSSCG00000055917) ENSSSCG00000057758 ENSSSCG00000054901 Artiodactyla_a ANCESTRAL SPECIES 9 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00910000146917 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00960000186859 ENSGT00410000025802.g.b ##24 ENSGT01030000235238 ENSGT00410000025802.h ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 Camelidae ANCESTRAL SPECIES 80 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00910000146917 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a Arabian camel MODERN SPECIES 204 HCFC1 (ENSCDRG00005010537) TMEM187 (ENSCDRG00005011270) IRAK1 (ENSCDRG00005011306) ENSCDRG00005011350 MECP2 (ENSCDRG00005011374) ENSCDRG00005011483 TEX28 (ENSCDRG00005011542) #13 TKTL1 (ENSCDRG00005011584) #14 FLNA (ENSCDRG00005011684) #16 ENSCDRG00005011914 #15 ENSCDRG00005012077 ##17 DNASE1L1 (ENSCDRG00005012179) #18 TAZ (ENSCDRG00005012375) #19 ATP6AP1 (ENSCDRG00005012618) #20 GDI1 (ENSCDRG00005012702) #21 FAM50A (ENSCDRG00005012822) #22 LAGE3 (ENSCDRG00005015984) #24 SLC10A3 (ENSCDRG00005016014) #26 FAM3A (ENSCDRG00005016065) #27 G6PD (ENSCDRG00005016281) #28 IKBKG (ENSCDRG00005016363) ENSCDRG00005016489 ENSCDRG00005016521 ##24 ENSCDRG00005016563 ##24 ENSCDRG00005016586 ##24 GAB3 (ENSCDRG00005016636) ENSCDRG00005017097 ##24 DKC1 (ENSCDRG00005017117) MPP1 (ENSCDRG00005017184) SMIM9 (ENSCDRG00005017392) F8 (ENSCDRG00005017422) Artiodactyla_b ANCESTRAL SPECIES 19 ENSGT00390000013740 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00960000186859 ENSGT00410000025802.g.b ##24 ENSGT01030000235238 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Pecora ANCESTRAL SPECIES 38 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.a.b.b ##17 ENSGT00390000003897.s.b.a.a.b.a.a ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 1 PRKCB (ENSCHYG00000001783) ENSCHYG00000001863 CACNG3 (ENSCHYG00000001876) RBBP6 (ENSCHYG00000001969) TNRC6A (ENSCHYG00000002244) SLC5A11 (ENSCHYG00000002666) ARHGAP17 (ENSCHYG00000002855) ENSCHYG00000003044 ENSCHYG00000003072 AQP8 (ENSCHYG00000003112) ZKSCAN2 (ENSCHYG00000003171) ENSCHYG00000003180 ENSCHYG00000003186 KDM8 (ENSCHYG00000003199) NSMCE1 (ENSCHYG00000003212) ENSCHYG00000003233 #22 IL4R (ENSCHYG00000003248) IL21R (ENSCHYG00000003266) GTF3C1 (ENSCHYG00000003332) KATNIP (ENSCHYG00000003636) GSG1L (ENSCHYG00000003754) XPO6 (ENSCHYG00000003767) SBK1 (ENSCHYG00000003796) ENSCHYG00000003821 SPNS1 (ENSCHYG00000003884) NFATC2IP (ENSCHYG00000003964) CD19 (ENSCHYG00000003996) RABEP2 (ENSCHYG00000004049) ATP2A1 (ENSCHYG00000004187) SH2B1 (ENSCHYG00000004267) TUFM (ENSCHYG00000004316) Yarkand deer MODERN SPECIES 6 ENSCHYG00000004880 SFRP5 (ENSCHYG00000004868) ZFYVE27 (ENSCHYG00000004712) MARVELD1 (ENSCHYG00000004459) AVPI1 (ENSCHYG00000004424) PI4K2A (ENSCHYG00000021371) MORN4 (ENSCHYG00000021303) HOGA1 (ENSCHYG00000021197) ANKRD2 (ENSCHYG00000020741) UBTD1 (ENSCHYG00000020651) MMS19 (ENSCHYG00000020307) ZDHHC16 (ENSCHYG00000019968) ENSCHYG00000019703 PGAM1 (ENSCHYG00000019647) RRP12 (ENSCHYG00000018769) ENSCHYG00000018643 #22 ENSCHYG00000018613 FRAT2 (ENSCHYG00000018576) FRAT1 (ENSCHYG00000018557) ARHGAP19 (ENSCHYG00000018209) ENSCHYG00000018017 SLIT1 (ENSCHYG00000017383) LCOR (ENSCHYG00000017121) PIK3AP1 (ENSCHYG00000016886) TM9SF3 (ENSCHYG00000016672) TLL2 (ENSCHYG00000016501) OPALIN (ENSCHYG00000016188) DNTT (ENSCHYG00000015940) BLNK (ENSCHYG00000015608) ZNF518A (ENSCHYG00000015551) CCNJ (ENSCHYG00000015424) Percora_a ANCESTRAL SPECIES 35 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.a.b.b ##17 ENSGT00390000003897.s.b.a.a.b.a.a ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a Bovidae ANCESTRAL SPECIES 33 ENSGT00390000013740 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.a.b.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT01030000235238.f ENSGT00410000025802.g.b ##24 ENSGT00960000186859 Caprinae ANCESTRAL SPECIES 45 ENSGT00390000013740 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.a.b.a.a ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a Rambouillet Sheep MODERN SPECIES 205 NAA10 (ENSOARG00020023246) RENBP (ENSOARG00020023053) HCFC1 (ENSOARG00020022415) TMEM187 (ENSOARG00020022375) IRAK1 (ENSOARG00020022349) MECP2 (ENSOARG00020022209) OPN1LW (ENSOARG00020022140) TKTL1 (ENSOARG00020021994) #14 FLNA (ENSOARG00020021631) #16 EMD (ENSOARG00020021549) #15 RPL10 (ENSOARG00020021458) ##17 DNASE1L1 (ENSOARG00020021378) #18 TAFAZZIN (ENSOARG00020020574) #19 ATP6AP1 (ENSOARG00020020475) #20 GDI1 (ENSOARG00020020178) #21 FAM50A (ENSOARG00020020129) #22 PLXNA3 (ENSOARG00020019933) #23 UBL4A (ENSOARG00020019884) #25 SLC10A3 (ENSOARG00020019833) #26 G6PD (ENSOARG00020019292) #28 IKBKG (ENSOARG00020018901) ENSOARG00020018798 #24 ENSOARG00020018745 ##24 ENSOARG00020018703 ENSOARG00020018678 ENSOARG00020018615 ENSOARG00020018581 ##24 ENSOARG00020018525 ENSOARG00020018504 ENSOARG00020018489 ENSOARG00020018476 Goat MODERN SPECIES 247 ENSCHIG00000025239 ##17 DNASE1L1 (ENSCHIG00000021139) #18 TAFAZZIN (ENSCHIG00000014783) #19 ATP6AP1 (ENSCHIG00000006977) #20 GDI1 (ENSCHIG00000011309) #21 FAM50A (ENSCHIG00000002986) #22 PLXNA3 (ENSCHIG00000022124) #23 Bovinae ANCESTRAL SPECIES 46 ENSGT00390000013740 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.a.b.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00410000025802.g.b ##24 ENSGT00960000186859 Bos ANCESTRAL SPECIES 36 ENSGT00390000013740 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.a.b.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT01100000263481.n.a.b.b.a.a.b.b ENSGT00530000063808.a ENSGT00410000025802.g.b ##24 ENSGT00960000186859 ENSGT00940000162668 ENSGT00940000163888 ENSGT00940000158335 ENSGT00730000111097.e ENSGT00940000159951.d.b.b.a.c.b Bos_a ANCESTRAL SPECIES 39 ENSGT00390000013740 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.a ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00530000063435.a #28 ENSGT01100000263481.n.a.b.b.a.a.b.b ENSGT00530000063808.a ENSGT00410000025802.g.b ##24 ENSGT00940000154891 ENSGT00910000144363.g.a.a.a.a.b ENSGT00910000144363.g.a.a.a.a.a ENSGT00390000001700.a.b.b.a.b ENSGT00940000161825.v.a.b ENSGT00940000161825.v.a.a.a ENSGT00940000162668 Domestic yak MODERN SPECIES 69 NAA10 (ENSBGRG00000021764) RENBP (ENSBGRG00000021852) HCFC1 (ENSBGRG00000021965) TMEM187 (ENSBGRG00000023012) IRAK1 (ENSBGRG00000023042) MECP2 (ENSBGRG00000023220) ENSBGRG00000023305 TKTL1 (ENSBGRG00000023403) #14 FLNA (ENSBGRG00000023487) #16 GDI1 (ENSBGRG00000023696) #21 EMD (ENSBGRG00000023778) #15 ENSBGRG00000023896 ##17 DNASE1L1 (ENSBGRG00000024010) #18 TAFAZZIN (ENSBGRG00000024079) #19 ATP6AP1 (ENSBGRG00000024299) #20 FAM50A (ENSBGRG00000024395) #22 PLXNA3 (ENSBGRG00000024820) #23 ENSBGRG00000026228 #24 UBL4A (ENSBGRG00000026234) #25 SLC10A3 (ENSBGRG00000026237) #26 G6PD (ENSBGRG00000026248) #28 ENSBGRG00000026272 IKBKG (ENSBGRG00000026284) ENSBGRG00000026304 ##24 ENSBGRG00000026315 ENSBGRG00000026319 ENSBGRG00000026324 ENSBGRG00000026327 ENSBGRG00000026328 ENSBGRG00000026332 ENSBGRG00000026333 Wild yak MODERN SPECIES 2585 ENSBMUG00000026916 ##17 DNASE1L1 (ENSBMUG00000026915) #18 TAFAZZIN (ENSBMUG00000026914) #19 ATP6AP1 (ENSBMUG00000026912) #20 GDI1 (ENSBMUG00000026911) #21 FAM50A (ENSBMUG00000026910) #22 PLXNA3 (ENSBMUG00000026909) #23 LAGE3 (ENSBMUG00000026908) #24 UBL4A (ENSBMUG00000026907) #25 SLC10A3 (ENSBMUG00000026906) #26 G6PD (ENSBMUG00000026905) #28 IKBKG (ENSBMUG00000026904) Bos_b ANCESTRAL SPECIES 31 ENSGT00390000013740 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.a.b.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT01100000263481.n.a.b.b.a.a.b.b ENSGT00530000063808.a ENSGT00940000160561.d.b ENSGT00410000025802.g.b ##24 ENSGT00960000186859 ENSGT00910000144363.g.a.a.a.a.b ENSGT00910000144363.g.a.a.a.a.a.a.a ENSGT00940000161825.v.a.b ENSGT00390000012182.i.a.a.b Hybrid Bos Indicus MODERN SPECIES 315 HCFC1 (ENSBIXG00005013025) TMEM187 (ENSBIXG00005013053) IRAK1 (ENSBIXG00005013081) ENSBIXG00005013100 MECP2 (ENSBIXG00005013169) ENSBIXG00005013198 TEX28 (ENSBIXG00005013213) #13 TKTL1 (ENSBIXG00005013244) #14 FLNA (ENSBIXG00005013367) #16 EMD (ENSBIXG00005013423) #15 ENSBIXG00005001627 ##17 DNASE1L1 (ENSBIXG00005005490) #18 ENSBIXG00005013746 #19 ATP6AP1 (ENSBIXG00005001714) #20 GDI1 (ENSBIXG00005001727) #21 FAM50A (ENSBIXG00005013872) #22 PLXNA3 (ENSBIXG00005013935) #23 LAGE3 (ENSBIXG00005006122) #24 ENSBIXG00005013979 #25 SLC10A3 (ENSBIXG00005013999) #26 ENSBIXG00005014028 G6PD (ENSBIXG00005014158) #28 IKBKG (ENSBIXG00005014233) ENSBIXG00005000250 ENSBIXG00005014255 ENSBIXG00005001881 ##24 ENSBIXG00005014316 ENSBIXG00005006735 ENSBIXG00005005973 ENSBIXG00005014407 ENSBIXG00005014423 Cow MODERN SPECIES 177 HCFC1 (ENSBTAG00000011904) TMEM187 (ENSBTAG00000008278) IRAK1 (ENSBTAG00000016085) MECP2 (ENSBTAG00000047855) ENSBTAG00000052492 OPN1LW (ENSBTAG00000020299) TEX28 (ENSBTAG00000020300) #13 TKTL1 (ENSBTAG00000020127) #14 FLNA (ENSBTAG00000011190) #16 EMD (ENSBTAG00000022314) #15 RPL10 (ENSBTAG00000007454) ##17 DNASE1L1 (ENSBTAG00000007455) #18 TAFAZZIN (ENSBTAG00000007456) #19 ATP6AP1 (ENSBTAG00000012117) #20 GDI1 (ENSBTAG00000012125) #21 FAM50A (ENSBTAG00000033032) #22 PLXNA3 (ENSBTAG00000008552) #23 LAGE3 (ENSBTAG00000054868) #24 UBL4A (ENSBTAG00000014331) #25 SLC10A3 (ENSBTAG00000014333) #26 FAM3A (ENSBTAG00000012747) #27 G6PD (ENSBTAG00000019512) #28 ENSBTAG00000053534 IKBKG (ENSBTAG00000006268) ENSBTAG00000001900 ENSBTAG00000048914 ##24 ENSBTAG00000055292 ENSBTAG00000053848 ##24 ENSBTAG00000052652 ENSBTAG00000049584 ENSBTAG00000054052 American bison MODERN SPECIES 2327 FAM50A (ENSBBBG00000006443) #22 Siberian musk deer DUPLICATION Siberian musk deer MODERN SPECIES 160 TSPAN8 (ENSMMSG00000004040) ENSMMSG00000004052 #22 ENSMMSG00000004060 LGR5 (ENSMMSG00000004094) ENSMMSG00000004252 ZFC3H1 (ENSMMSG00000004286) THAP2 (ENSMMSG00000004473) TMEM19 (ENSMMSG00000004487) RAB21 (ENSMMSG00000004503) TBC1D15 (ENSMMSG00000004532) TPH2 (ENSMMSG00000006186) TRHDE (ENSMMSG00000006227) Siberian musk deer MODERN SPECIES 14 RENBP (ENSMMSG00000015497) HCFC1 (ENSMMSG00000015453) TMEM187 (ENSMMSG00000015428) IRAK1 (ENSMMSG00000015351) ENSMMSG00000015287 ENSMMSG00000015261 TEX28 (ENSMMSG00000015249) #13 TKTL1 (ENSMMSG00000015211) #14 FLNA (ENSMMSG00000014357) #16 EMD (ENSMMSG00000014247) #15 ENSMMSG00000014213 ##17 ENSMMSG00000014152 #18 TAFAZZIN (ENSMMSG00000014064) #19 ATP6AP1 (ENSMMSG00000014033) #20 GDI1 (ENSMMSG00000013993) #21 ENSMMSG00000013933 #22 PLXNA3 (ENSMMSG00000013876) #23 LAGE3 (ENSMMSG00000013858) #24 UBL4A (ENSMMSG00000013839) #25 SLC10A3 (ENSMMSG00000013825) #26 ENSMMSG00000013656 #27 G6PD (ENSMMSG00000013593) #28 IKBKG (ENSMMSG00000013522) ENSMMSG00000013493 ##24 Cetacea DUPLICATION Cetacea ANCESTRAL SPECIES ENSGT00390000004735.A.m #22 Odontoceti ANCESTRAL SPECIES 19 ENSGT00390000013740 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A.m #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00410000025802.g.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 Odontoceti_a ANCESTRAL SPECIES 21 ENSGT00390000013740 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034.i #15 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A.m #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00960000186859 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 Odontoceti_b ANCESTRAL SPECIES 17 ENSGT00390000013740 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034.i #15 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A.m #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00960000186859 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020.y ENSGT00390000016992.x Monodontidae ANCESTRAL SPECIES 19 ENSGT00950000182824.a.b.b ENSGT00390000013740 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034.i #15 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A.m #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00960000186859 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020.z ENSGT00390000016992.w Beluga whale MODERN SPECIES 139 ARHGAP4 (ENSDLEG00000010745) RENBP (ENSDLEG00000010782) HCFC1 (ENSDLEG00000010826) TMEM187 (ENSDLEG00000010884) IRAK1 (ENSDLEG00000010892) MECP2 (ENSDLEG00000010908) ENSDLEG00000010916 TKTL1 (ENSDLEG00000010974) #14 FLNA (ENSDLEG00000010999) #16 EMD (ENSDLEG00000011102) #15 ENSDLEG00000011125 ##17 DNASE1L1 (ENSDLEG00000011154) #18 TAZ (ENSDLEG00000011183) #19 ATP6AP1 (ENSDLEG00000011212) #20 GDI1 (ENSDLEG00000011245) #21 FAM50A (ENSDLEG00000011270) #22 PLXNA3 (ENSDLEG00000011331) #23 LAGE3 (ENSDLEG00000011398) #24 UBL4A (ENSDLEG00000011413) #26 FAM3A (ENSDLEG00000011447) #27 G6PD (ENSDLEG00000011468) #28 IKBKG (ENSDLEG00000011500) ENSDLEG00000011523 ENSDLEG00000011545 GAB3 (ENSDLEG00000011559) DKC1 (ENSDLEG00000011603) MPP1 (ENSDLEG00000011647) F8 (ENSDLEG00000011690) ENSDLEG00000011965 ENSDLEG00000011977 FUNDC2 (ENSDLEG00000011985) Narwhal MODERN SPECIES 309 TMEM187 (ENSMMNG00015012935) IRAK1 (ENSMMNG00015012947) MECP2 (ENSMMNG00015012982) ENSMMNG00015013034 ENSMMNG00015013048 ENSMMNG00015013056 TKTL1 (ENSMMNG00015013076) #14 FLNA (ENSMMNG00015013139) #16 ENSMMNG00015013213 #15 ENSMMNG00015013277 ##17 DNASE1L1 (ENSMMNG00015013295) #18 ENSMMNG00015013313 #19 ENSMMNG00015013329 ATP6AP1 (ENSMMNG00015013337) #20 GDI1 (ENSMMNG00015013359) #21 ENSMMNG00015013390 #22 PLXNA3 (ENSMMNG00015013425) #23 LAGE3 (ENSMMNG00015013456) #24 UBL4A (ENSMMNG00015013467) #25 SLC10A3 (ENSMMNG00015013481) #26 FAM3A (ENSMMNG00015013509) #27 G6PD (ENSMMNG00015013556) #28 IKBKG (ENSMMNG00015013582) Vaquita MODERN SPECIES 34 MECP2 (ENSPSNG00000021858) ENSPSNG00000021893 TEX28 (ENSPSNG00000021914) #13 ENSPSNG00000021927 ENSPSNG00000021942 ENSPSNG00000021951 ENSPSNG00000021965 TKTL1 (ENSPSNG00000021994) #14 FLNA (ENSPSNG00000022089) #16 ENSPSNG00000022266 #15 ENSPSNG00000022280 ##17 DNASE1L1 (ENSPSNG00000022297) #18 TAFAZZIN (ENSPSNG00000022306) #19 ATP6AP1 (ENSPSNG00000022314) #20 GDI1 (ENSPSNG00000022323) #21 ENSPSNG00000022331 #22 PLXNA3 (ENSPSNG00000022341) #23 ENSPSNG00000022354 #24 SLC10A3 (ENSPSNG00000022364) #26 FAM3A (ENSPSNG00000022374) #27 G6PD (ENSPSNG00000022382) #28 IKBKG (ENSPSNG00000022395) ENSPSNG00000022407 ENSPSNG00000022414 ENSPSNG00000022416 #24 GAB3 (ENSPSNG00000022421) DKC1 (ENSPSNG00000022426) MPP1 (ENSPSNG00000022439) SMIM9 (ENSPSNG00000022452) F8 (ENSPSNG00000022465) ENSPSNG00000022473 Cetacea ANCESTRAL SPECIES 19 ENSGT00390000013740 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A.n #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00410000025802.g.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 Odontoceti ANCESTRAL SPECIES ENSGT00390000004735.A.n #22 Odontoceti_a ANCESTRAL SPECIES ENSGT00390000004735.A.n #22 Odontoceti_b ANCESTRAL SPECIES 7 ENSGT00940000158686 ENSGT00940000160413 ENSGT00940000158342.b ENSGT00390000018272 ENSGT00940000157538 ENSGT00730000111039.C ENSGT00500000044938 ENSGT00920000149095.b ENSGT00940000155352 ENSGT00640000091574 ENSGT00950000182839.A.c ENSGT00940000158251 ENSGT00940000162858 ENSGT00940000163725 ENSGT00940000157277 ENSGT00390000004735.A.n #22 ENSGT00940000156144 ENSGT00530000063745.b ENSGT00390000006546 ENSGT01050000244900.a.a.a.a.b ENSGT00940000157479 ENSGT00940000153222.a.a ENSGT00950000182959.a.a ENSGT00950000182959.a.b.b.a ENSGT00940000159215 ENSGT00940000160698 ENSGT00940000154172.ab.b ENSGT00940000156120.a ENSGT00390000000406 ENSGT00940000155394 ENSGT00940000158014 Monodontidae ANCESTRAL SPECIES 6 ENSGT00940000160413 ENSGT00940000158342.b ENSGT00390000012138.a.b.t.bb.a.a.d ENSGT00390000018272 ENSGT00940000157538 ENSGT00730000111039.C ENSGT00500000044938 ENSGT00920000149095.b ENSGT00940000155352 ENSGT00640000091574 ENSGT00950000182839.A.c ENSGT00940000158251 ENSGT00940000162858 ENSGT00940000163725 ENSGT00940000157277 ENSGT00390000004735.A.n #22 ENSGT00940000156144 ENSGT00530000063745.b ENSGT00390000006546 ENSGT01050000244900.a.a.a.a.b ENSGT00940000157479 ENSGT00940000153222.a.a ENSGT00950000182959.a.a ENSGT00950000182959.a.b.b.a ENSGT00940000159215 ENSGT00940000160698 ENSGT00940000154172.ab.b ENSGT00940000156120.a ENSGT00390000000406 ENSGT00940000155394 ENSGT00940000158014 Narwhal MODERN SPECIES 313 POC1B (ENSMMNG00015021321) DUSP6 (ENSMMNG00015021301) ENSMMNG00015021288 KITLG (ENSMMNG00015021271) TMTC3 (ENSMMNG00015021249) CEP290 (ENSMMNG00015021183) C12orf29 (ENSMMNG00015021146) C12orf50 (ENSMMNG00015021109) MGAT4C (ENSMMNG00015021064) NTS (ENSMMNG00015021038) RASSF9 (ENSMMNG00015021023) ALX1 (ENSMMNG00015020997) LRRIQ1 (ENSMMNG00015020965) TSPAN19 (ENSMMNG00015020883) SLC6A15 (ENSMMNG00015020847) FAM50A (ENSMMNG00015020820) #22 TMTC2 (ENSMMNG00015020798) METTL25 (ENSMMNG00015020747) CCDC59 (ENSMMNG00015020720) PPFIA2 (ENSMMNG00015020218) ACSS3 (ENSMMNG00015019853) ENSMMNG00015019830 LIN7A (ENSMMNG00015019774) MYF5 (ENSMMNG00015019736) MYF6 (ENSMMNG00015019715) PTPRQ (ENSMMNG00015019359) OTOGL (ENSMMNG00015018567) ENSMMNG00015018420 PPP1R12A (ENSMMNG00015018194) ENSMMNG00015018085 PAWR (ENSMMNG00015018035) Beluga whale MODERN SPECIES 38 POC1B (ENSDLEG00000005012) DUSP6 (ENSDLEG00000005047) ENSDLEG00000005056 KITLG (ENSDLEG00000005063) TMTC3 (ENSDLEG00000005092) CEP290 (ENSDLEG00000005127) CUNH12orf29 (ENSDLEG00000005151) C12orf50 (ENSDLEG00000005169) MGAT4C (ENSDLEG00000005205) NTS (ENSDLEG00000005212) RASSF9 (ENSDLEG00000005216) ALX1 (ENSDLEG00000005225) LRRIQ1 (ENSDLEG00000005238) TSPAN19 (ENSDLEG00000005256) SLC6A15 (ENSDLEG00000005270) FAM50A (ENSDLEG00000005280) #22 TMTC2 (ENSDLEG00000005298) METTL25 (ENSDLEG00000005328) CCDC59 (ENSDLEG00000005346) ENSDLEG00000005352 Vaquita MODERN SPECIES 1 DUSP6 (ENSPSNG00000004604) KITLG (ENSPSNG00000004647) TMTC3 (ENSPSNG00000004690) CEP290 (ENSPSNG00000004767) C12orf29 (ENSPSNG00000004829) C12orf50 (ENSPSNG00000004876) MGAT4C (ENSPSNG00000004935) NTS (ENSPSNG00000004962) RASSF9 (ENSPSNG00000004990) ALX1 (ENSPSNG00000005010) LRRIQ1 (ENSPSNG00000005070) TSPAN19 (ENSPSNG00000005188) SLC6A15 (ENSPSNG00000005229) ENSPSNG00000005260 TMTC2 (ENSPSNG00000005299) FAM50A (ENSPSNG00000005402) #22 METTL25 (ENSPSNG00000005420) ENSPSNG00000005450 PPFIA2 (ENSPSNG00000005685) ACSS3 (ENSPSNG00000006403) LIN7A (ENSPSNG00000006484) MYF5 (ENSPSNG00000006510) MYF6 (ENSPSNG00000006531) PTPRQ (ENSPSNG00000006652) OTOGL (ENSPSNG00000007188) PPP1R12A (ENSPSNG00000008207) ENSPSNG00000008403 PAWR (ENSPSNG00000008439) SYT1 (ENSPSNG00000008513) ENSPSNG00000008562 NAV3 (ENSPSNG00000009074) Dolphin MODERN SPECIES 6810 ENSTTRG00000011407 ##17 DNASE1L1 (ENSTTRG00000011408) #18 TAFAZZIN (ENSTTRG00000011410) #19 ATP6AP1 (ENSTTRG00000011434) #20 GDI1 (ENSTTRG00000011454) #21 FAM50A (ENSTTRG00000011462) #22 PLXNA3 (ENSTTRG00000011474) #23 Sperm whale MODERN SPECIES 13 VBP1 (ENSPCTG00005016073) BRCC3 (ENSPCTG00005015822) MTCP1 (ENSPCTG00005015780) CMC4 (ENSPCTG00005015746) FUNDC2 (ENSPCTG00005015711) F8A1 (ENSPCTG00005015687) ENSPCTG00005015667 F8 (ENSPCTG00005015296) SMIM9 (ENSPCTG00005015221) MPP1 (ENSPCTG00005014958) DKC1 (ENSPCTG00005014862) GAB3 (ENSPCTG00005014727) ENSPCTG00005014674 ##24 IKBKG (ENSPCTG00005014430) GDI1 (ENSPCTG00005014385) #21 FAM50A (ENSPCTG00005014324) #22 PLXNA3 (ENSPCTG00005014209) #23 ENSPCTG00005014136 #24 UBL4A (ENSPCTG00005014090) #25 SLC10A3 (ENSPCTG00005014048) #26 FAM3A (ENSPCTG00005013803) #28 DNASE1L1 (ENSPCTG00005013759) #18 RPL10 (ENSPCTG00005013674) ##17 EMD (ENSPCTG00005013517) #15 FLNA (ENSPCTG00005012993) #16 TKTL1 (ENSPCTG00005012476) #14 ENSPCTG00005022081 TEX28 (ENSPCTG00005022073) #13 ENSPCTG00005022067 MECP2 (ENSPCTG00005022045) ENSPCTG00005022009 Blue whale DUPLICATION Blue whale MODERN SPECIES 40 TMEM187 (ENSBMSG00010019836) IRAK1 (ENSBMSG00010019854) MECP2 (ENSBMSG00010019964) ENSBMSG00010020090 TEX28 (ENSBMSG00010020541) #13 ENSBMSG00010020592 #14 FLNA (ENSBMSG00010020850) #16 EMD (ENSBMSG00010021072) #15 ENSBMSG00010021096 #14 ENSBMSG00010021119 #14 ENSBMSG00010021148 ##17 DNASE1L1 (ENSBMSG00010021173) #18 TAFAZZIN (ENSBMSG00010021182) #19 ATP6AP1 (ENSBMSG00010021220) #20 GDI1 (ENSBMSG00010021239) #21 ENSBMSG00010021250 #22 PLXNA3 (ENSBMSG00010021267) #23 LAGE3 (ENSBMSG00010021278) #24 UBL4A (ENSBMSG00010021291) #25 SLC10A3 (ENSBMSG00010021301) #26 FAM3A (ENSBMSG00010021308) #27 G6PD (ENSBMSG00010021326) #28 IKBKG (ENSBMSG00010021344) ENSBMSG00010021370 ENSBMSG00010021382 ENSBMSG00010021407 DKC1 (ENSBMSG00010021430) MPP1 (ENSBMSG00010021484) SMIM9 (ENSBMSG00010021513) F8 (ENSBMSG00010021526) ENSBMSG00010021588 Blue whale MODERN SPECIES MYSM1 (ENSBMSG00010001159) JUN (ENSBMSG00010001187) FGGY (ENSBMSG00010001218) HOOK1 (ENSBMSG00010001303) CYP2J2 (ENSBMSG00010001319) ENSBMSG00010001338 NFIA (ENSBMSG00010001455) TM2D1 (ENSBMSG00010001753) PATJ (ENSBMSG00010001826) ENSBMSG00010002038 KANK4 (ENSBMSG00010002062) ENSBMSG00010002165 ENSBMSG00010002182 DOCK7 (ENSBMSG00010002212) ANGPTL3 (ENSBMSG00010002379) ENSBMSG00010002413 #22 ENSBMSG00010002428 FOXD3 (ENSBMSG00010002458) ALG6 (ENSBMSG00010002470) ITGB3BP (ENSBMSG00010002488) ENSBMSG00010002519 EFCAB7 (ENSBMSG00010002542) PGM1 (ENSBMSG00010002593) ROR1 (ENSBMSG00010002655) UBE2U (ENSBMSG00010002698) CACHD1 (ENSBMSG00010002730) RAVER2 (ENSBMSG00010002835) JAK1 (ENSBMSG00010002874) ENSBMSG00010003046 ENSBMSG00010003053 ENSBMSG00010003064 Laurasiatheria_b ANCESTRAL SPECIES 10 ENSGT00390000013740 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT01050000244815.B.a.a ENSGT00410000025802.h ##24 ENSGT00410000025802.g.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Carnivora ANCESTRAL SPECIES 11 ENSGT00390000013740 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00410000025802.h ##24 ENSGT00410000025802.g.b ##24 ENSGT01050000244815.B.a.a ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 Felidae ANCESTRAL SPECIES 29 ENSGT00390000013740 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744.m ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f Panthera ANCESTRAL SPECIES 65 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a Panthera_a ANCESTRAL SPECIES 76 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a leopard MODERN SPECIES 303 ENSPPRG00000021464 ##17 DNASE1L1 (ENSPPRG00000021313) #18 TAFAZZIN (ENSPPRG00000020887) #19 ATP6AP1 (ENSPPRG00000020575) #20 GDI1 (ENSPPRG00000020392) #21 FAM50A (ENSPPRG00000020113) #22 ENSPPRG00000019153 #25 SLC10A3 (ENSPPRG00000018639) #26 FAM3A (ENSPPRG00000018526) #27 G6PD (ENSPPRG00000018173) #28 IKBKG (ENSPPRG00000017843) lion MODERN SPECIES 113 ENSPLOG00000007204 #17 DNASE1L1 (ENSPLOG00000007262) #18 ENSPLOG00000007302 #19 ATP6AP1 (ENSPLOG00000007351) #20 GDI1 (ENSPLOG00000007386) #21 FAM50A (ENSPLOG00000007410) #22 PLXNA3 (ENSPLOG00000007506) #23 LAGE3 (ENSPLOG00000007855) #24 SLC10A3 (ENSPLOG00000007885) #26 FAM3A (ENSPLOG00000007925) #27 G6PD (ENSPLOG00000008022) #28 IKBKG (ENSPLOG00000008081) Cat MODERN SPECIES 252 RENBP (ENSFCAG00000018690) HCFC1 (ENSFCAG00000011387) TMEM187 (ENSFCAG00000011388) IRAK1 (ENSFCAG00000010847) MECP2 (ENSFCAG00000011389) OPN1LW (ENSFCAG00000011390) TEX28 (ENSFCAG00000044525) #13 TKTL1 (ENSFCAG00000011392) #14 FLNA (ENSFCAG00000011393) #16 EMD (ENSFCAG00000011394) #15 ENSFCAG00000011395 #17 DNASE1L1 (ENSFCAG00000011396) #18 TAFAZZIN (ENSFCAG00000023652) #19 ATP6AP1 (ENSFCAG00000011397) #20 GDI1 (ENSFCAG00000011398) #21 FAM50A (ENSFCAG00000011399) #22 PLXNA3 (ENSFCAG00000011400) #23 LAGE3 (ENSFCAG00000038204) #24 UBL4A (ENSFCAG00000025607) #25 SLC10A3 (ENSFCAG00000022989) #26 FAM3A (ENSFCAG00000035237) #27 G6PD (ENSFCAG00000043880) #28 IKBKG (ENSFCAG00000029840) ENSFCAG00000048808 GAB3 (ENSFCAG00000006576) DKC1 (ENSFCAG00000006577) MPP1 (ENSFCAG00000006578) SMIM9 (ENSFCAG00000040693) F8 (ENSFCAG00000048336) ENSFCAG00000045185 FUNDC2 (ENSFCAG00000031335) Caniformia ANCESTRAL SPECIES 22 ENSGT00390000013740 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00390000002034 #15 ENSGT00940000153588.b #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00410000025802.h ##24 ENSGT00410000025802.g.b ##24 ENSGT01050000244815.B.a.a ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000163020 Canidae ANCESTRAL SPECIES 50 ENSGT00390000013740 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00390000002034 #15 ENSGT00940000153588.b #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT01050000244815.B.a.a ENSGT00410000025802.h ##24 ENSGT00410000025802.g.b ##24 ENSGT00940000159803 ENSGT00510000047092.a ENSGT00940000158744 ENSGT00940000163020 ENSGT00390000016992 Canis_lupus ANCESTRAL SPECIES 22 ENSGT00390000013740 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00390000002034 #15 ENSGT00940000153588.b #16 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a.g #24 ENSGT00410000025802.g.a.h #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT01050000244815.B.a.a ENSGT00410000025802.h ##24 ENSGT00410000025802.g.b.k ##24 ENSGT00940000159803 ENSGT00510000047092.a ENSGT00940000158744 ENSGT00940000163020 Dog MODERN SPECIES 144 RENBP (ENSCAFG00845026554) HCFC1 (ENSCAFG00845026790) TMEM187 (ENSCAFG00845027090) IRAK1 (ENSCAFG00845027126) MECP2 (ENSCAFG00845027255) OPN1LW (ENSCAFG00845027363) TEX28 (ENSCAFG00845027400) #13 TKTL1 (ENSCAFG00845027442) #14 EMD (ENSCAFG00845027618) #15 FLNA (ENSCAFG00845027901) #16 RPL10 (ENSCAFG00845028627) #17 DNASE1L1 (ENSCAFG00845028675) #18 TAZ (ENSCAFG00845028739) #19 GDI1 (ENSCAFG00845028921) #21 ATP6AP1 (ENSCAFG00845029004) #20 FAM50A (ENSCAFG00845029041) #22 PLXNA3 (ENSCAFG00845029121) #23 ENSCAFG00845029273 #24 UBL4A (ENSCAFG00845029287) #25 SLC10A3 (ENSCAFG00845029316) #26 ENSCAFG00845029578 #27 G6PD (ENSCAFG00845029388) #28 IKBKG (ENSCAFG00845029634) cOR7R1 (ENSCAFG00845029673) ENSCAFG00845029686 ##24 ENSCAFG00845029697 ##24 LAGE3 (ENSCAFG00845029708) #24 ENSCAFG00845029817 ##24 DKC1 (ENSCAFG00845029852) MPP1 (ENSCAFG00845029936) F8 (ENSCAFG00845030098) Dingo MODERN SPECIES 383 RENBP (ENSCAFG00020022111) HCFC1 (ENSCAFG00020022091) IRAK1 (ENSCAFG00020022089) MECP2 (ENSCAFG00020022079) ENSCAFG00020022061 TEX28 (ENSCAFG00020022059) #13 ENSCAFG00020022055 TKTL1 (ENSCAFG00020022053) #14 EMD (ENSCAFG00020022046) #15 FLNA (ENSCAFG00020009434) #16 ENSCAFG00020009114 #17 DNASE1L1 (ENSCAFG00020009104) #18 TAFAZZIN (ENSCAFG00020009089) #19 ATP6AP1 (ENSCAFG00020009077) #20 GDI1 (ENSCAFG00020009070) #21 FAM50A (ENSCAFG00020009064) #22 PLXNA3 (ENSCAFG00020009040) #23 ENSCAFG00020009037 #24 UBL4A (ENSCAFG00020009032) #25 SLC10A3 (ENSCAFG00020009027) #26 FAM3A (ENSCAFG00020009021) #27 G6PD (ENSCAFG00020008999) #28 IKBKG (ENSCAFG00020008992) ENSCAFG00020008988 ENSCAFG00020008985 ENSCAFG00020008976 ##24 ENSCAFG00020008968 #24 ENSCAFG00020008959 ##24 ENSCAFG00020008942 ENSCAFG00020008918 MPP1 (ENSCAFG00020008744) Red fox MODERN SPECIES 263 RENBP (ENSVVUG00000029602) HCFC1 (ENSVVUG00000029596) TMEM187 (ENSVVUG00000029595) IRAK1 (ENSVVUG00000029594) MECP2 (ENSVVUG00000029591) ENSVVUG00000029585 TKTL1 (ENSVVUG00000029580) #14 TEX28 (ENSVVUG00000029579) #13 EMD (ENSVVUG00000029577) #15 FLNA (ENSVVUG00000029569) #16 RPL10 (ENSVVUG00000029559) #17 DNASE1L1 (ENSVVUG00000029556) #18 TAZ (ENSVVUG00000029551) #19 ATP6AP1 (ENSVVUG00000029548) #20 GDI1 (ENSVVUG00000029546) #21 ENSVVUG00000029545 #22 PLXNA3 (ENSVVUG00000029541) #23 SLC10A3 (ENSVVUG00000029540) #26 FAM3A (ENSVVUG00000029538) #27 G6PD (ENSVVUG00000029537) #28 IKBKG (ENSVVUG00000029536) Caniformia_b ANCESTRAL SPECIES 27 ENSGT00390000013740 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.h ##24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT01030000235238.c ENSGT00410000025802.g.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f Mustelinae ANCESTRAL SPECIES 108 ENSGT00390000013740 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00410000025802.h ##24 Ferret DUPLICATION Ferret MODERN SPECIES 531 HCFC1 (ENSMPUG00000009029) ENSMPUG00000009052 IRAK1 (ENSMPUG00000009059) MECP2 (ENSMPUG00000009072) ENSMPUG00000009081 TEX28 (ENSMPUG00000009202) #13 TKTL1 (ENSMPUG00000009214) #14 ENSMPUG00000019510 EMD (ENSMPUG00000009232) #15 FLNA (ENSMPUG00000009293) #16 ENSMPUG00000009320 #17 DNASE1L1 (ENSMPUG00000009354) #18 TAFAZZIN (ENSMPUG00000009363) #19 ATP6AP1 (ENSMPUG00000009450) #20 GDI1 (ENSMPUG00000009461) #21 ENSMPUG00000009476 #22 PLXNA3 (ENSMPUG00000009629) #23 UBL4A (ENSMPUG00000009650) #25 SLC10A3 (ENSMPUG00000019511) #26 FAM3A (ENSMPUG00000009671) #27 G6PD (ENSMPUG00000009722) #28 IKBKG (ENSMPUG00000009835) ENSMPUG00000009840 ENSMPUG00000019515 Ferret MODERN SPECIES 169 ENSMPUG00000005043 VRK2 (ENSMPUG00000005056) FANCL (ENSMPUG00000005063) ENSMPUG00000018814 ENSMPUG00000005122 ENSMPUG00000005129 ENSMPUG00000005140 #22 ENSMPUG00000005161 PAPOLG (ENSMPUG00000005165) REL (ENSMPUG00000005180) PUS10 (ENSMPUG00000005185) ENSMPUG00000005228 SANBR (ENSMPUG00000005235) ENSMPUG00000005244 USP34 (ENSMPUG00000005248) XPO1 (ENSMPUG00000005560) FAM161A (ENSMPUG00000005585) CCT4 (ENSMPUG00000005615) COMMD1 (ENSMPUG00000005842) B3GNT2 (ENSMPUG00000018818) ENSMPUG00000005847 TMEM17 (ENSMPUG00000005851) Ursidae ANCESTRAL SPECIES 45 ENSGT00390000013740 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00390000002034 #15 ENSGT00940000153588.b #16 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.h ##24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00410000025802.g.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744.p ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000013102.f Ursus ANCESTRAL SPECIES 220 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00410000025802.h ##24 Polar bear MODERN SPECIES 330 NAA10 (ENSUMAG00000020773) RENBP (ENSUMAG00000020768) ENSUMAG00000020761 TMEM187 (ENSUMAG00000020759) ENSUMAG00000020747 ENSUMAG00000020714 TEX28 (ENSUMAG00000020707) #13 TKTL1 (ENSUMAG00000020693) #14 EMD (ENSUMAG00000020684) #15 FLNA (ENSUMAG00000019645) #16 ENSUMAG00000019583 ##17 DNASE1L1 (ENSUMAG00000019505) #18 ENSUMAG00000019531 #19 ATP6AP1 (ENSUMAG00000019476) #20 GDI1 (ENSUMAG00000019473) #21 FAM50A (ENSUMAG00000019470) #22 SLC10A3 (ENSUMAG00000019457) #26 FAM3A (ENSUMAG00000019452) #27 G6PD (ENSUMAG00000019300) #28 IKBKG (ENSUMAG00000019273) ENSUMAG00000019269 ##24 ENSUMAG00000019262 Giant Panda MODERN SPECIES 2288 HCFC1 (ENSAMEG00000018450) TMEM187 (ENSAMEG00000019206) IRAK1 (ENSAMEG00000018449) MECP2 (ENSAMEG00000029148) ENSAMEG00000018445 TEX28 (ENSAMEG00000018444) #13 ENSAMEG00000018441 #14 ENSAMEG00000007222 #15 ENSAMEG00000007261 #16 ENSAMEG00000030923 RPL10 (ENSAMEG00000000227) #17 ENSAMEG00000000229 #18 ENSAMEG00000000230 #19 ATP6AP1 (ENSAMEG00000000239) #20 GDI1 (ENSAMEG00000000265) #21 FAM50A (ENSAMEG00000000273) #22 PLXNA3 (ENSAMEG00000000281) #23 ENSAMEG00000026988 ##24 UBL4A (ENSAMEG00000026286) #25 SLC10A3 (ENSAMEG00000000359) #26 FAM3A (ENSAMEG00000000362) #27 G6PD (ENSAMEG00000000366) #28 IKBKG (ENSAMEG00000000410) ENSAMEG00000019272 ENSAMEG00000019282 GAB3 (ENSAMEG00000001366) DKC1 (ENSAMEG00000002776) MPP1 (ENSAMEG00000002802) SMIM9 (ENSAMEG00000028154) F8 (ENSAMEG00000002491) ENSAMEG00000028778 Laurasiatheria_c ANCESTRAL SPECIES 10 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00390000003897.s.b.a.a.b ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00410000025802.g.b ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 Equus ANCESTRAL SPECIES 52 ENSGT00390000013740 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.b.b #17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00410000025802.g.b.n ##24 ENSGT00410000025802.g.b.m ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f Donkey MODERN SPECIES 36 RENBP (ENSEASG00005019286) HCFC1 (ENSEASG00005019244) TMEM187 (ENSEASG00005038494) IRAK1 (ENSEASG00005019196) MECP2 (ENSEASG00005019188) ENSEASG00005019183 TEX28 (ENSEASG00005019182) #13 TKTL1 (ENSEASG00005019179) #14 FLNA (ENSEASG00005018577) #16 EMD (ENSEASG00005019177) #15 ENSEASG00005025120 #17 DNASE1L1 (ENSEASG00005028299) #18 TAFAZZIN (ENSEASG00005025100) #19 ATP6AP1 (ENSEASG00005034458) #20 GDI1 (ENSEASG00005018454) #21 FAM50A (ENSEASG00005018449) #22 PLXNA3 (ENSEASG00005018440) #23 UBL4A (ENSEASG00005018436) #25 SLC10A3 (ENSEASG00005018434) #26 FAM3A (ENSEASG00005018431) #27 G6PD (ENSEASG00005018430) #28 ENSEASG00005032513 ENSEASG00005032016 ##24 ENSEASG00005027434 ENSEASG00005031374 ENSEASG00005028284 ENSEASG00005034297 ##24 ENSEASG00005032503 ##24 ENSEASG00005033034 ENSEASG00005007484 MPP1 (ENSEASG00005007482) Horse MODERN SPECIES 480 RENBP (ENSECAG00000018888) HCFC1 (ENSECAG00000022440) TMEM187 (ENSECAG00000001086) IRAK1 (ENSECAG00000009585) MECP2 (ENSECAG00000018208) OPN1LW (ENSECAG00000018684) TEX28 (ENSECAG00000021904) #13 TKTL1 (ENSECAG00000021992) #14 EMD (ENSECAG00000013908) #15 FLNA (ENSECAG00000009550) #16 RPL10 (ENSECAG00000017154) ##17 DNASE1L1 (ENSECAG00000003758) #18 TAFAZZIN (ENSECAG00000010872) #19 ATP6AP1 (ENSECAG00000014216) #20 GDI1 (ENSECAG00000017687) #21 FAM50A (ENSECAG00000023594) #22 PLXNA3 (ENSECAG00000025088) #23 LAGE3 (ENSECAG00000038130) #24 UBL4A (ENSECAG00000013506) #25 SLC10A3 (ENSECAG00000013796) #26 FAM3A (ENSECAG00000013840) #27 G6PD (ENSECAG00000014994) #28 IKBKG (ENSECAG00000020595) ENSECAG00000033189 ENSECAG00000029643 ##24 ENSECAG00000056189 ENSECAG00000031652 ##24 GAB3 (ENSECAG00000023348) DKC1 (ENSECAG00000023524) MPP1 (ENSECAG00000009595) F8 (ENSECAG00000015044) Chiroptera ANCESTRAL SPECIES 48 ENSGT00390000013740 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.a.a ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00410000025802.g.b ##24 ENSGT01050000244815.B.a.a ENSGT01030000238159 ENSGT00410000025802.h ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 Microchiroptera ANCESTRAL SPECIES 45 ENSGT00390000013740 ENSGT00940000161383 ENSGT00390000011272 ENSGT00940000160502 ENSGT00530000063687.b.b.b ENSGT01030000234549.a.a.a.b ENSGT00940000162843 #13 ENSGT00940000162426 #14 ENSGT00940000153588.b #16 ENSGT00390000002034 #15 ENSGT00390000003897.s.b.a.a.a ##17 ENSGT00950000182846.a.a.a.a.a #18 ENSGT00390000018621 #19 ENSGT00940000156650 #20 ENSGT00950000182994.B.a.a.a #21 ENSGT00390000004735.A #22 ENSGT01050000244850.A.a #23 ENSGT00410000025802.g.a #24 ENSGT00730000111022 #25 ENSGT00950000182808.b.b #26 ENSGT00950000183004.a.a.a.b #27 ENSGT00530000063435.a #28 ENSGT00530000063808.a ENSGT00410000025802.g.b ##24 ENSGT01050000244815.B.a.a ENSGT01030000238159 ENSGT00410000025802.h ##24 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00940000160294 Microbat DUPLICATION Microbat MODERN SPECIES 1349 EIF3L (ENSMLUG00000028617) ENSMLUG00000014301 C22orf23 (ENSMLUG00000029482) ENSMLUG00000014315 SOX10 (ENSMLUG00000014317) PICK1 (ENSMLUG00000016795) SLC16A8 (ENSMLUG00000016804) BAIAP2L2 (ENSMLUG00000026542) PLA2G6 (ENSMLUG00000012355) MAFF (ENSMLUG00000011358) TMEM184B (ENSMLUG00000011364) CSNK1E (ENSMLUG00000011391) KCNJ4 (ENSMLUG00000008623) KDELR3 (ENSMLUG00000013148) DDX17 (ENSMLUG00000013151) ENSMLUG00000030689 #22 DMC1 (ENSMLUG00000013162) Microbat MODERN SPECIES 977 RENBP (ENSMLUG00000014271) HCFC1 (ENSMLUG00000014275) TMEM187 (ENSMLUG00000014286) IRAK1 (ENSMLUG00000014288) MECP2 (ENSMLUG00000014297) ENSMLUG00000024727 ENSMLUG00000014299 TEX28 (ENSMLUG00000014304) #13 TKTL1 (ENSMLUG00000014306) #14 EMD (ENSMLUG00000005200) #15 FLNA (ENSMLUG00000014316) #16 ENSMLUG00000014337 ##17 DNASE1L1 (ENSMLUG00000014342) #18 TAFAZZIN (ENSMLUG00000024037) #19 ATP6AP1 (ENSMLUG00000003493) #20 ENSMLUG00000022234 #22 GDI1 (ENSMLUG00000003501) #21 PLXNA3 (ENSMLUG00000010006) #23 ENSMLUG00000030030 #24 UBL4A (ENSMLUG00000027145) #25 SLC10A3 (ENSMLUG00000008199) #26 FAM3A (ENSMLUG00000005226) #27 G6PD (ENSMLUG00000008210) #28 IKBKG (ENSMLUG00000027075) ENSMLUG00000025335 Greater horseshoe bat MODERN SPECIES RENBP (ENSRFEG00010004689) HCFC1 (ENSRFEG00010004542) TMEM187 (ENSRFEG00010004460) IRAK1 (ENSRFEG00010004369) MECP2 (ENSRFEG00010004285) ENSRFEG00010004230 TEX28 (ENSRFEG00010004212) #13 TKTL1 (ENSRFEG00010004159) #14 FLNA (ENSRFEG00010004101) #16 EMD (ENSRFEG00010004008) #15 RPL10 (ENSRFEG00010003909) ##17 BT_m006_jsm59FD5r (ENSRFEG00010003791) #18 TAZ (ENSRFEG00010003720) #19 ATP6AP1 (ENSRFEG00010003617) #20 GDI1 (ENSRFEG00010003480) #21 FAM50A (ENSRFEG00010003417) #22 PLXNA3 (ENSRFEG00010003374) #23 LAGE3 (ENSRFEG00010003340) #24 UBL4A (ENSRFEG00010003315) #25 SLC10A3 (ENSRFEG00010003285) #26 FAM3A (ENSRFEG00010003196) #27 G6PD (ENSRFEG00010003111) #28 IKBKG (ENSRFEG00010003030) ENSRFEG00010002995 ##24 ENSRFEG00010002963 ##24 ENSRFEG00010002921 ENSRFEG00010002889 ENSRFEG00010002860 ##24 GAB3 (ENSRFEG00010002752) DKC1 (ENSRFEG00010002621) MPP1 (ENSRFEG00010002502) Megabat MODERN SPECIES 3437 EMD (ENSPVAG00000003741) #15 FLNA (ENSPVAG00000003735) #16 ENSPVAG00000003734 #22 Sauria ANCESTRAL SPECIES ENSGT00390000004735.A #22 Archelosauria ANCESTRAL SPECIES ENSGT00390000004735.A #22 Archosauria ANCESTRAL SPECIES ENSGT00390000004735.A #22 Aves ANCESTRAL SPECIES ENSGT00390000004735.A #22 Neognathae ANCESTRAL SPECIES ENSGT00390000004735.A #22 Neognathae_b ANCESTRAL SPECIES ENSGT00390000004735.A #22 Neognathae_c ANCESTRAL SPECIES ENSGT00390000004735.A #22 Kakapo MODERN SPECIES 27 ENSSHBG00005008463 WDR45 (ENSSHBG00005008450) ENSSHBG00005008422 ENSSHBG00005008400 #22 ENSSHBG00005008388 #27 ENSSHBG00005008249 #28 IKBKG (ENSSHBG00005008187) ENSSHBG00005008159 SEPHS2 (ENSSHBG00005008143) ENSSHBG00005008129 SLC35A2 (ENSSHBG00005008109) PORCN (ENSSHBG00005008085) ENSSHBG00005008057 GATA1 (ENSSHBG00005008065) ENSSHBG00005008000 #28 ENSSHBG00005007974 #27 UBL4A (ENSSHBG00005007963) #25 ENSSHBG00005007944 ##22 ATP6AP1 (ENSSHBG00005007878) #20 Galloanserae ANCESTRAL SPECIES ENSGT00390000004735.A #22 Phasianidae ANCESTRAL SPECIES ENSGT00390000004735.A #22 Japanese quail MODERN SPECIES 144 ENSCJPG00005000494 #22 ENSCJPG00005000493 #25 Actinopterygii ANCESTRAL SPECIES ENSGT00390000004735.A #22 Neopterygii ANCESTRAL SPECIES ENSGT00390000004735.A #22 Osteoglossocephalai ANCESTRAL SPECIES ENSGT00390000004735.A #22 Osteoglossiformes ANCESTRAL SPECIES ENSGT00390000004735.A #22 P. kingsleyae MODERN SPECIES 137 slc6a22.1 (ENSPKIG00000004830) slc6a22.2 (ENSPKIG00000004779) oard1 (ENSPKIG00000004754) apobec2a (ENSPKIG00000004741) itpr3 (ENSPKIG00000004648) ENSPKIG00000004584 FRS3 (ENSPKIG00000004553) ENSPKIG00000004541 RAB7B (ENSPKIG00000004522) ppil1 (ENSPKIG00000004501) ENSPKIG00000004464 celsr2 (ENSPKIG00000004409) ENSPKIG00000004386 sars1 (ENSPKIG00000004342) alas2 (ENSPKIG00000004306) FAM50A (ENSPKIG00000004275) #22 ENSPKIG00000004252 vgll4l (ENSPKIG00000004235) syn1 (ENSPKIG00000004211) araf (ENSPKIG00000004179) ENSPKIG00000004164 imp4 (ENSPKIG00000004119) mdh2 (ENSPKIG00000004090) mdh2 (ENSPKIG00000004080) Elephant shark MODERN SPECIES 1107 ENSCMIG00000001090 #22