Tetrapoda	ANCESTRAL SPECIES	16	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT01040000241257	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a #25	ENSGT00940000158960 #26	ENSGT00940000157672	ENSGT00940000160211	ENSGT01050000244841.A.b.a.b.a.b	ENSGT00940000161738	ENSGT00550000075019	ENSGT00940000156131.a.b	ENSGT00940000157187	ENSGT00950000182966.B
Amniota	ANCESTRAL SPECIES	25	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT01040000241257	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000157672	ENSGT01030000235333	ENSGT00940000160211	ENSGT01050000244841.A.b.a.b.a.b	ENSGT00940000161738	ENSGT00550000075019	ENSGT00940000156131.a.b	ENSGT00940000157187	ENSGT00950000182966.B	ENSGT00940000157499
Mammalia	ANCESTRAL SPECIES	62	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a #25	ENSGT00940000166682	ENSGT00940000158960 #26
Theria	ANCESTRAL SPECIES	17	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000154623 #27	ENSGT00940000155883.a.a #28	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33	ENSGT00950000182967.a #34	ENSGT00390000016353
Eutheria	ANCESTRAL SPECIES	19	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000158564	ENSGT00940000154623 #27	ENSGT00940000155883.a.a #28	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33	ENSGT00950000182967.a.b #34
Boreoeutheria	ANCESTRAL SPECIES	5	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00390000008759	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000158564	ENSGT00940000154623 #27	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33
Euarchontoglires	ANCESTRAL SPECIES	5	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00390000008759	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000158564	ENSGT00940000154623 #27	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33
Primates	ANCESTRAL SPECIES	21	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000154623 #27	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33	ENSGT00950000182967.a.b #34	ENSGT00950000182967.a.a.a.a.b.b.b ##33
Haplorrhini	ANCESTRAL SPECIES	21	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000154623 #27	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33	ENSGT00950000182967.a.b #34	ENSGT00950000182967.a.a.a.a.b.b.b ##33
Simiiformes	ANCESTRAL SPECIES	21	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00910000146868	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000154623 #27	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00860000135784	ENSGT00950000182967.b #33	ENSGT00950000182967.a.b #34
Catarrhini	ANCESTRAL SPECIES	11	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00910000146868	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000154623.d #27	ENSGT00940000154623.c ##27	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00910000147186	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32
Cercopithecidae	ANCESTRAL SPECIES	8	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT01020000230346.C.c.a.b.a	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00940000163338.b.b	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00910000146868	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000154623.d #27	ENSGT00940000154623.c ##27	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00910000147186	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00860000135784
Cercopithecinae	ANCESTRAL SPECIES	10	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT01020000230346.C.c.a.b.a	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00940000163338.b.b	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00910000146868	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000154623.d #27	ENSGT00940000154623.c ##27	ENSGT00940000161596.f	ENSGT00940000155883.a.a #28	ENSGT00910000147186	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349.e #31	ENSGT00390000017113 #32	ENSGT00860000135784
Cercopithecinae_a	ANCESTRAL SPECIES	10	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT01020000230346.C.c.a.b.a	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00940000163338.b.b.b	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00910000146868	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000154623.d #27	ENSGT00940000154623.c ##27	ENSGT00940000161596.f	ENSGT00940000155883.a.a #28	ENSGT00910000147186	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349.e #31	ENSGT00390000017113 #32	ENSGT00860000135784
Cercopithecinae_b	ANCESTRAL SPECIES	5	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00940000163338.b.b.b	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00910000146868	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000154623.d #27	ENSGT00940000154623.c ##27	ENSGT00940000161596.f	ENSGT00910000147186	ENSGT00940000155883.a.a #28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349.e #31	ENSGT00390000017113 #32	ENSGT00860000135784	ENSGT00950000182967.b #33
Olive baboon	MODERN SPECIES	9	NKD1 (ENSPANG00000009782) #7	SNX20 (ENSPANG00000000812) #8	NOD2 (ENSPANG00000019150) #9	CYLD (ENSPANG00000019153) #10	SALL1 (ENSPANG00000024176) #11	TOX3 (ENSPANG00000016176) #12	ENSPANG00000034612 #13	CHD9NB (ENSPANG00000047104) #14	CHD9 (ENSPANG00000019307) #15	RBL2 (ENSPANG00000021504) #16	AKTIP (ENSPANG00000018701) #17	RPGRIP1L (ENSPANG00000015743) #18	FTO (ENSPANG00000016386) #19	ENSPANG00000017095 #20	IRX3 (ENSPANG00000041905) #21	IRX5 (ENSPANG00000007155) #22	IRX6 (ENSPANG00000024570) #23	MMP2 (ENSPANG00000006408) #24	LPCAT2 (ENSPANG00000006269) #25	SLC6A2 (ENSPANG00000018478) #26	ENSPANG00000030695 #27	ENSPANG00000008680 #28	AMFR (ENSPANG00000015100) #29	NUDT21 (ENSPANG00000019149) #30	OGFOD1 (ENSPANG00000009024) #31	BBS2 (ENSPANG00000024569) #32	MT4 (ENSPANG00000016472) #33	MT3 (ENSPANG00000046071) #34	ENSPANG00000047587 #35	ENSPANG00000039383 #36	ENSPANG00000042278 #37
Cercopithecinae_d	ANCESTRAL SPECIES	4	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00940000163338.b.b.b	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00910000146868	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000154623.d #27	ENSGT00940000154623.c ##27	ENSGT00940000161596.f	ENSGT00940000155883.a.a #28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349.e #31	ENSGT00390000017113 #32	ENSGT00860000135784	ENSGT00950000182967.b #33	ENSGT00940000168571
Sooty mangabey	MODERN SPECIES	96	NKD1 (ENSCATG00000033443) #7	SNX20 (ENSCATG00000031155) #8	NOD2 (ENSCATG00000032818) #9	CYLD (ENSCATG00000025694) #10	SALL1 (ENSCATG00000004982) #11	TOX3 (ENSCATG00000008040) #12	ENSCATG00000030774	CHD9 (ENSCATG00000036753) #15	ENSCATG00000009432	RBL2 (ENSCATG00000009941) #16	AKTIP (ENSCATG00000033583) #17	RPGRIP1L (ENSCATG00000037264) #18	FTO (ENSCATG00000030692) #19	IRX3 (ENSCATG00000035868) #21	ENSCATG00000021759	IRX5 (ENSCATG00000044712) #22	IRX6 (ENSCATG00000035256) #23	MMP2 (ENSCATG00000014549) #24	LPCAT2 (ENSCATG00000044509) #25	SLC6A2 (ENSCATG00000031249) #26	ENSCATG00000017887 #27	ENSCATG00000020328	CES1 (ENSCATG00000014882) ##27	ENSCATG00000044607	ENSCATG00000039943	ENSCATG00000028998	ENSCATG00000044323 #28	AMFR (ENSCATG00000042472) #29	NUDT21 (ENSCATG00000042445) #30	ENSCATG00000044192 #31	BBS2 (ENSCATG00000038814) #32
Drill	MODERN SPECIES	300													RPGRIP1L (ENSMLEG00000036666) #18	FTO (ENSMLEG00000017912) #19	ENSMLEG00000038444	IRX5 (ENSMLEG00000012602) #22	IRX6 (ENSMLEG00000038519) #23	MMP2 (ENSMLEG00000038401) #24	LPCAT2 (ENSMLEG00000037181) #25	SLC6A2 (ENSMLEG00000027926) #26	CES1 (ENSMLEG00000044465) ##27	ENSMLEG00000043012	ENSMLEG00000038598 #28	AMFR (ENSMLEG00000043009) #29	NUDT21 (ENSMLEG00000041489) #30	ENSMLEG00000026033 #31	BBS2 (ENSMLEG00000038488) #32	MT4 (ENSMLEG00000042836) #33	ENSMLEG00000038055	MT1E (ENSMLEG00000036072) ##33	ENSMLEG00000034829 ##33
Macaca	ANCESTRAL SPECIES	8	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT01020000230346.C.c.a.b.a	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00940000163338.b.b.b	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000154623.d #27	ENSGT00940000154623.c ##27	ENSGT00940000161596.e.a.a	ENSGT00940000161596.f	ENSGT00940000155883.a.a #28	ENSGT00910000147186	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349.e #31	ENSGT00390000017113 #32
Pig-tailed macaque	MODERN SPECIES	210							ENSMNEG00000024002	CHD9 (ENSMNEG00000031494) #15	ENSMNEG00000029277	ENSMNEG00000040866	RBL2 (ENSMNEG00000033394) #16	AKTIP (ENSMNEG00000035738) #17	RPGRIP1L (ENSMNEG00000042142) #18	FTO (ENSMNEG00000045021) #19	IRX3 (ENSMNEG00000029795) #21	IRX5 (ENSMNEG00000041335) #22	IRX6 (ENSMNEG00000043717) #23	MMP2 (ENSMNEG00000031914) #24	LPCAT2 (ENSMNEG00000040910) #25	SLC6A2 (ENSMNEG00000041564) #26	ENSMNEG00000011789 #27	ENSMNEG00000029990	CES1 (ENSMNEG00000034468) ##27	ENSMNEG00000027385	ENSMNEG00000045061 #28	AMFR (ENSMNEG00000042160) #29	NUDT21 (ENSMNEG00000038680) #30	OGFOD1 (ENSMNEG00000033175) #31	BBS2 (ENSMNEG00000008390) #32	MT4 (ENSMNEG00000035193) #33	MT3 (ENSMNEG00000040263) #34
Macaca_a	ANCESTRAL SPECIES	14	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00940000163338.b.b.b	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000154623.d #27	ENSGT00940000154623.c ##27	ENSGT00940000161596.f	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349.e #31	ENSGT00390000017113 #32	ENSGT00860000135784	ENSGT00950000182967.b #33	ENSGT00950000182967.a.b #34
Rhesus	MODERN SPECIES	12	SNX20 (ENSMMUG00000019869) #8	NOD2 (ENSMMUG00000012207) #9	CYLD (ENSMMUG00000012209) #10	ENSMMUG00000055889	SALL1 (ENSMMUG00000017200) #11	TOX3 (ENSMMUG00000013967) #12	ENSMMUG00000049893	ENSMMUG00000061289	CHD9 (ENSMMUG00000016310) #15	ENSMMUG00000051469	RBL2 (ENSMMUG00000043440) #16	AKTIP (ENSMMUG00000008657) #17	RPGRIP1L (ENSMMUG00000020580) #18	FTO (ENSMMUG00000020583) #19	IRX3 (ENSMMUG00000001389) #21	IRX5 (ENSMMUG00000017440) #22	IRX6 (ENSMMUG00000011658) #23	MMP2 (ENSMMUG00000004475) #24	LPCAT2 (ENSMMUG00000004478) #25	SLC6A2 (ENSMMUG00000020238) #26	CES1 (ENSMMUG00000009454) ##27	CES5A (ENSMMUG00000051854)	GNAO1 (ENSMMUG00000019900) ##28	AMFR (ENSMMUG00000019902) #29	NUDT21 (ENSMMUG00000038955) #30	OGFOD1 (ENSMMUG00000029125) #31	BBS2 (ENSMMUG00000013268) #32	ENSMMUG00000061028	ENSMMUG00000057052	MT4 (ENSMMUG00000016108) #33	MT3 (ENSMMUG00000060235) #34
Crab-eating macaque	MODERN SPECIES	12	ENSMFAG00000033996 #8	NOD2 (ENSMFAG00000037753) #9	CYLD (ENSMFAG00000043501) #10	SALL1 (ENSMFAG00000003298) #11	TOX3 (ENSMFAG00000032933) #12	ENSMFAG00000056521	ENSMFAG00000060755	CHD9 (ENSMFAG00000041354) #15	RBL2 (ENSMFAG00000039132) #16	ENSMFAG00000059726	AKTIP (ENSMFAG00000044514) #17	RPGRIP1L (ENSMFAG00000043106) #18	FTO (ENSMFAG00000033026) #19	ENSMFAG00000065181	IRX3 (ENSMFAG00000032048) #21	IRX5 (ENSMFAG00000002928) #22	IRX6 (ENSMFAG00000046096) #23	MMP2 (ENSMFAG00000037156) #24	LPCAT2 (ENSMFAG00000032289) #25	SLC6A2 (ENSMFAG00000002998) #26	ENSMFAG00000043869 #27	CES1 (ENSMFAG00000031843) ##27	ENSMFAG00000032808	ENSMFAG00000003402	ENSMFAG00000057214	ENSMFAG00000058142	ENSMFAG00000032734 #28	ENSMFAG00000063480	AMFR (ENSMFAG00000042034) #29	NUDT21 (ENSMFAG00000048376) #30	OGFOD1 (ENSMFAG00000013084) #31
Vervet Monkey	MODERN SPECIES	24	SNX20 (ENSCSAG00000005339) #8	NOD2 (ENSCSAG00000005331) #9	CYLD (ENSCSAG00000005324) #10	SALL1 (ENSCSAG00000005319) #11	TOX3 (ENSCSAG00000005317) #12	CHD9 (ENSCSAG00000005311) #15	ENSCSAG00000005305	ENSCSAG00000018863	RBL2 (ENSCSAG00000005301) #16	AKTIP (ENSCSAG00000005299) #17	RPGRIP1L (ENSCSAG00000005297) #18	FTO (ENSCSAG00000005296) #19	ENSCSAG00000005293	IRX3 (ENSCSAG00000005290) #21	ENSCSAG00000005289	IRX5 (ENSCSAG00000005287) #22	IRX6 (ENSCSAG00000005285) #23	MMP2 (ENSCSAG00000005282) #24	LPCAT2 (ENSCSAG00000005278) #25	SLC6A2 (ENSCSAG00000005269) #26	ENSCSAG00000005241 #27	ENSCSAG00000005170 ##27	ENSCSAG00000005164 ##27	CES5A (ENSCSAG00000005154)	GNAO1 (ENSCSAG00000005143) ##28	AMFR (ENSCSAG00000005139) #29	NUDT21 (ENSCSAG00000005136) #30	OGFOD1 (ENSCSAG00000005135) #31	BBS2 (ENSCSAG00000005126) #32	MT4 (ENSCSAG00000005113) #33	MT1A (ENSCSAG00000005109) ##33
Rhinopithecus	ANCESTRAL SPECIES	332							ENSGT00940000155706.c #15	ENSGT00940000163338.b.b	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00940000161598.e.a.a.a.b	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00910000146868	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000154623.d #27	ENSGT00940000154623.c.a ##27
Golden snub-nosed monkey	MODERN SPECIES	1820															ENSRROG00000029370	IRX5 (ENSRROG00000038558) #22	IRX6 (ENSRROG00000028730) #23	MMP2 (ENSRROG00000038451) #24	LPCAT2 (ENSRROG00000025645) #25	SLC6A2 (ENSRROG00000030384) #26	ENSRROG00000035693 #27	ENSRROG00000030878 ##27
Black snub-nosed monkey	MODERN SPECIES	487								RBL2 (ENSRBIG00000011461) #16	AKTIP (ENSRBIG00000034898) #17	ENSRBIG00000038506	RPGRIP1L (ENSRBIG00000031305) #18	ENSRBIG00000027550	ENSRBIG00000037512 #19	IRX3 (ENSRBIG00000023657) #21	ENSRBIG00000028078	IRX5 (ENSRBIG00000037396) #22	IRX6 (ENSRBIG00000036640) #23	MMP2 (ENSRBIG00000034271) #24	LPCAT2 (ENSRBIG00000041129) #25
Hominoidea	ANCESTRAL SPECIES	9	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00910000146868	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000154623.d #27	ENSGT00940000154623.c ##27	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00910000147186	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32
Hominidae	ANCESTRAL SPECIES	9	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00910000146868	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000154623.d #27	ENSGT00940000154623.c ##27	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00910000147186	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	19	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125.k #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00910000146868	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000154623.d #27	ENSGT00940000154623.c ##27	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00910000147186	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32
Gorilla	MODERN SPECIES	7	NKD1 (ENSGGOG00000008141) #7	SNX20 (ENSGGOG00000042612) #8	NOD2 (ENSGGOG00000010795) #9	CYLD (ENSGGOG00000008448) #10	SALL1 (ENSGGOG00000000663) #11	TOX3 (ENSGGOG00000009117) #12	ENSGGOG00000036262	CHD9NB (ENSGGOG00000037829) #14	CHD9 (ENSGGOG00000014816) #15	RBL2 (ENSGGOG00000025953) #16	AKTIP (ENSGGOG00000014821) #17	RPGRIP1L (ENSGGOG00000011141) #18	FTO (ENSGGOG00000011151) #19	IRX3 (ENSGGOG00000014067) #21	ENSGGOG00000036175	IRX5 (ENSGGOG00000027776) #22	IRX6 (ENSGGOG00000004496) #23	MMP2 (ENSGGOG00000021966) #24	LPCAT2 (ENSGGOG00000005144) #25	SLC6A2 (ENSGGOG00000005154) #26	ENSGGOG00000026056 #27	CES1 (ENSGGOG00000016469) ##27	ENSGGOG00000001724	ENSGGOG00000002398 #28	AMFR (ENSGGOG00000041520) #29	NUDT21 (ENSGGOG00000002375) #30	OGFOD1 (ENSGGOG00000002377) #31	BBS2 (ENSGGOG00000016051) #32	MT4 (ENSGGOG00000005198) #33	ENSGGOG00000024229 #34	MT1E (ENSGGOG00000009847) ##33
Homo/Pan group	ANCESTRAL SPECIES	19	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125.k #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00910000146868	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000154623.d #27	ENSGT00940000154623.c ##27	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00910000147186	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32
Pan	ANCESTRAL SPECIES	19	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT01030000234542.b.a.a.a.b.b	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125.k #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00910000146868	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000154623.d #27	ENSGT00940000154623.c ##27	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00910000147186	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33	ENSGT00950000182967.a.b #34
Bonobo	MODERN SPECIES	7	ENSPPAG00000017627 #7	SNX20 (ENSPPAG00000031596) #8	NOD2 (ENSPPAG00000042973) #9	CYLD (ENSPPAG00000027949) #10	SALL1 (ENSPPAG00000035657) #11	TOX3 (ENSPPAG00000042135) #12	ENSPPAG00000030984	ENSPPAG00000028107 #15	ENSPPAG00000039388 #15	RBL2 (ENSPPAG00000037125) #16	AKTIP (ENSPPAG00000031822) #17	RPGRIP1L (ENSPPAG00000039576) #18	FTO (ENSPPAG00000028022) #19	IRX3 (ENSPPAG00000004040) #21	ENSPPAG00000041131	IRX5 (ENSPPAG00000033596) #22	IRX6 (ENSPPAG00000016478) #23	MMP2 (ENSPPAG00000040209) #24	LPCAT2 (ENSPPAG00000031029) #25	SLC6A2 (ENSPPAG00000030886) #26	ENSPPAG00000031542 #27	ENSPPAG00000041201 ##27	CES5A (ENSPPAG00000042932)	ENSPPAG00000041676 #28	ENSPPAG00000041451	AMFR (ENSPPAG00000041202) #29	NUDT21 (ENSPPAG00000043853) #30	OGFOD1 (ENSPPAG00000030934) #31	BBS2 (ENSPPAG00000032542) #32	ENSPPAG00000037676 #33	ENSPPAG00000040767 #34
Chimpanzee	MODERN SPECIES	7	BRD7 (ENSPTRG00000008103)	NKD1 (ENSPTRG00000008104) #7	SNX20 (ENSPTRG00000008105) #8	NOD2 (ENSPTRG00000008106) #9	CYLD (ENSPTRG00000008107) #10	SALL1 (ENSPTRG00000008108) #11	TOX3 (ENSPTRG00000008110) #12	ENSPTRG00000045090	CHD9 (ENSPTRG00000008113) #15	RBL2 (ENSPTRG00000008115) #16	AKTIP (ENSPTRG00000008116) #17	RPGRIP1L (ENSPTRG00000008117) #18	FTO (ENSPTRG00000008118) #19	IRX3 (ENSPTRG00000008120) #21	ENSPTRG00000043727	IRX5 (ENSPTRG00000044627) #22	IRX6 (ENSPTRG00000008122) #23	MMP2 (ENSPTRG00000008123) #24	LPCAT2 (ENSPTRG00000008124) #25	SLC6A2 (ENSPTRG00000008126) #26	CES1 (ENSPTRG00000022723) ##27	CES5A (ENSPTRG00000008128)	GNAO1 (ENSPTRG00000008129) #28	ENSPTRG00000045916	AMFR (ENSPTRG00000008130) #29	NUDT21 (ENSPTRG00000008131) #30	OGFOD1 (ENSPTRG00000023015) #31	BBS2 (ENSPTRG00000008133) #32	MT4 (ENSPTRG00000008134) #33	MT2A (ENSPTRG00000044929) #34	ENSPTRG00000050915 ##33
Human	MODERN SPECIES	7	BRD7 (ENSG00000166164)	NKD1 (ENSG00000140807) #7	SNX20 (ENSG00000167208) #8	NOD2 (ENSG00000167207) #9	CYLD (ENSG00000083799) #10	SALL1 (ENSG00000103449) #11	HNRNPA1L3 (ENSG00000224578) ##20	TOX3 (ENSG00000103460) #12	CHD9NB (ENSG00000277639) #14	CHD9 (ENSG00000177200) #15	RBL2 (ENSG00000103479) #16	AKTIP (ENSG00000166971) #17	RPGRIP1L (ENSG00000103494) #18	FTO (ENSG00000140718) #19	IRX3 (ENSG00000177508) #21	IRX5 (ENSG00000176842) #22	IRX6 (ENSG00000159387) #23	MMP2 (ENSG00000087245) #24	LPCAT2 (ENSG00000087253) #25	CAPNS2 (ENSG00000256812)	SLC6A2 (ENSG00000103546) #26	CES1 (ENSG00000198848) ##27	CES5A (ENSG00000159398)	GNAO1 (ENSG00000087258) ##28	AMFR (ENSG00000159461) #29	NUDT21 (ENSG00000167005) #30	OGFOD1 (ENSG00000087263) #31	BBS2 (ENSG00000125124) #32	MT4 (ENSG00000102891) #33	MT3 (ENSG00000087250) #34	MT2A (ENSG00000125148) ##33
Orangutan	MODERN SPECIES	7	ADCY7 (ENSPPYG00000007338)	BRD7 (ENSPPYG00000007339)	NKD1 (ENSPPYG00000007340) #7	SNX20 (ENSPPYG00000035536) #8	NOD2 (ENSPPYG00000007343) #9	CYLD (ENSPPYG00000007344) #10	ENSPPYG00000040133	TOX3 (ENSPPYG00000007346) #12	CHD9NB (ENSPPYG00000032964) #14	CHD9 (ENSPPYG00000007348) #15	RBL2 (ENSPPYG00000007350) #16	AKTIP (ENSPPYG00000007351) #17	RPGRIP1L (ENSPPYG00000007352) #18	FTO (ENSPPYG00000007353) #19	IRX3 (ENSPPYG00000007354) #21	IRX5 (ENSPPYG00000007355) #22	IRX6 (ENSPPYG00000007356) #23	MMP2 (ENSPPYG00000007357) #24	LPCAT2 (ENSPPYG00000007358) #25	SLC6A2 (ENSPPYG00000007359) #26	ENSPPYG00000007360 #27	CES1 (ENSPPYG00000007361) ##27	CES5A (ENSPPYG00000007362)	ENSPPYG00000007363 #28	AMFR (ENSPPYG00000007364) #29	NUDT21 (ENSPPYG00000007365) #30	OGFOD1 (ENSPPYG00000007366) #31	BBS2 (ENSPPYG00000007368) #32	MT4 (ENSPPYG00000007369) #33	ENSPPYG00000007370 #34	MT2A (ENSPPYG00000038311) ##33
Gibbon	MODERN SPECIES	11	BRD7 (ENSNLEG00000000834)	NKD1 (ENSNLEG00000029864) #7	SNX20 (ENSNLEG00000033286) #8	NOD2 (ENSNLEG00000000910) #9	CYLD (ENSNLEG00000000923) #10	SALL1 (ENSNLEG00000001008) #11	ENSNLEG00000034210 #12	ENSNLEG00000013975	CHD9 (ENSNLEG00000001026) #15	RBL2 (ENSNLEG00000001036) #16	AKTIP (ENSNLEG00000031116) #17	RPGRIP1L (ENSNLEG00000001149) #18	FTO (ENSNLEG00000033330) #19	IRX3 (ENSNLEG00000032462) #21	ENSNLEG00000035629	IRX5 (ENSNLEG00000001190) #22	IRX6 (ENSNLEG00000001193) #23	MMP2 (ENSNLEG00000001210) #24	LPCAT2 (ENSNLEG00000001258) #25	SLC6A2 (ENSNLEG00000001314) #26	ENSNLEG00000001480 #27	CES1 (ENSNLEG00000030872) ##27	CES5A (ENSNLEG00000001687)	GNAO1 (ENSNLEG00000001819) ##28	AMFR (ENSNLEG00000001861) #29	NUDT21 (ENSNLEG00000001963) #30	OGFOD1 (ENSNLEG00000002028) #31	BBS2 (ENSNLEG00000002099) #32	MT4 (ENSNLEG00000002227) #33	ENSNLEG00000031594	MT2A (ENSNLEG00000002233) ##33
Platyrrhini	ANCESTRAL SPECIES	21	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00910000146868	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000154623.f #27	ENSGT00940000154623.e #27	ENSGT00940000161596	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00860000135784	ENSGT00950000182967.b #33	ENSGT00940000168571
Cebidae	ANCESTRAL SPECIES	21	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934.a #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00910000146868	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000161596	ENSGT00940000154623.f #27	ENSGT00940000154623.e #27	ENSGT00940000155883.a.b ##28	ENSGT00910000147186	ENSGT00940000155883.a.a #28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00860000135784
Marmoset	MODERN SPECIES	12	CYLD (ENSCJAG00000001749) #10	SALL1 (ENSCJAG00000001740) #11	ENSCJAG00000073253	ENSCJAG00000040416	TOX3 (ENSCJAG00000001731) #12	ENSCJAG00000073882	ENSCJAG00000070155	CHD9 (ENSCJAG00000001573) #15	ENSCJAG00000038895	RBL2 (ENSCJAG00000001518) #16	ENSCJAG00000001498 #17	RPGRIP1L (ENSCJAG00000001445) #18	FTO (ENSCJAG00000001425) #19	IRX3 (ENSCJAG00000001418) #21	ENSCJAG00000084160	IRX5 (ENSCJAG00000012968) #22	IRX6 (ENSCJAG00000012962) #23	MMP2 (ENSCJAG00000012929) #24	LPCAT2 (ENSCJAG00000012902) #25	SLC6A2 (ENSCJAG00000012830) #26	ENSCJAG00000076318 #27	ENSCJAG00000038677 #27	GNAO1 (ENSCJAG00000012765) ##28	AMFR (ENSCJAG00000012741) #29	NUDT21 (ENSCJAG00000053553) #30	OGFOD1 (ENSCJAG00000012630) #31	BBS2 (ENSCJAG00000012681) #32	ENSCJAG00000012664	MT4 (ENSCJAG00000012675) #33	MT3 (ENSCJAG00000080783) #34	ENSCJAG00000071755
Cebidae_a	ANCESTRAL SPECIES	95	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934.a #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00910000146868	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000161596	ENSGT00940000154623.f #27	ENSGT00940000154623.e #27
Bolivian squirrel monkey	MODERN SPECIES	133	SNX20 (ENSSBOG00000029064) #8	ENSSBOG00000025917	NOD2 (ENSSBOG00000024291) #9	CYLD (ENSSBOG00000023333) #10	SALL1 (ENSSBOG00000032186) #11	ENSSBOG00000032298	TOX3 (ENSSBOG00000031439) #12	CHD9 (ENSSBOG00000030240) #15	RBL2 (ENSSBOG00000035559) #16	ENSSBOG00000028267 #17	RPGRIP1L (ENSSBOG00000029639) #18	FTO (ENSSBOG00000031008) #19	IRX3 (ENSSBOG00000030739) #21	ENSSBOG00000016301	ENSSBOG00000030191	IRX5 (ENSSBOG00000027403) #22	IRX6 (ENSSBOG00000035547) #23	MMP2 (ENSSBOG00000031949) #24	LPCAT2 (ENSSBOG00000025828) #25	SLC6A2 (ENSSBOG00000024899) #26	CES1 (ENSSBOG00000018667) #27
Capuchin	MODERN SPECIES	63	SALL1 (ENSCCAG00000001639) #11	ENSCCAG00000021070	ENSCCAG00000022450	ENSCCAG00000022165	TOX3 (ENSCCAG00000024480) #12	ENSCCAG00000020240	ENSCCAG00000022180	CHD9 (ENSCCAG00000036178) #15	RBL2 (ENSCCAG00000035540) #16	AKTIP (ENSCCAG00000034526) #17	RPGRIP1L (ENSCCAG00000026356) #18	FTO (ENSCCAG00000025984) #19	IRX3 (ENSCCAG00000029708) #21	ENSCCAG00000033265	ENSCCAG00000035759	IRX5 (ENSCCAG00000035591) #22	IRX6 (ENSCCAG00000035521) #23	MMP2 (ENSCCAG00000021698) #24	LPCAT2 (ENSCCAG00000033939) #25	SLC6A2 (ENSCCAG00000038013) #26
Mas night monkey	MODERN SPECIES	968						SALL1 (ENSANAG00000027238) #11	TOX3 (ENSANAG00000033705) #12	ENSANAG00000018076	CHD9 (ENSANAG00000015630) #15	RBL2 (ENSANAG00000034864) #16	AKTIP (ENSANAG00000032426) #17	RPGRIP1L (ENSANAG00000023174) #18	FTO (ENSANAG00000036534) #19	IRX3 (ENSANAG00000024444) #21	ENSANAG00000037324	IRX5 (ENSANAG00000030825) #22	IRX6 (ENSANAG00000021405) #23	MMP2 (ENSANAG00000029632) #24	LPCAT2 (ENSANAG00000028308) #25	SLC6A2 (ENSANAG00000023105) #26	ENSANAG00000032650 #27	ENSANAG00000027060 #27	CES5A (ENSANAG00000033849)	GNAO1 (ENSANAG00000018520) ##28	AMFR (ENSANAG00000032893) #29	ENSANAG00000017020	NUDT21 (ENSANAG00000034588) #30	OGFOD1 (ENSANAG00000025601) #31	BBS2 (ENSANAG00000028155) #32	MT4 (ENSANAG00000038356) #33	ENSANAG00000032352 ##33
Tarsier	MODERN SPECIES	3110																ENSTSYG00000006383 #22
Strepsirrhini	ANCESTRAL SPECIES	17	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000158564	ENSGT00940000154623 #27	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33	ENSGT00950000182967.a.b #34	ENSGT00950000182967.a.a.a.a.b.b.b ##33
Lemuriformes	ANCESTRAL SPECIES	69	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26
Lemuriformes_a	ANCESTRAL SPECIES	236											ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26
Greater bamboo lemur	MODERN SPECIES	420	MLYCD (ENSPSMG00000006247)	OSGIN1 (ENSPSMG00000006253)	NECAB2 (ENSPSMG00000006259)	SLC38A8 (ENSPSMG00000006263)	MBTPS1 (ENSPSMG00000006295)	HSDL1 (ENSPSMG00000006312)	ENSPSMG00000006316	ENSPSMG00000006326	ENSPSMG00000006334	ADAD2 (ENSPSMG00000006339)	RBL2 (ENSPSMG00000006447) #16	AKTIP (ENSPSMG00000006498) #17	RPGRIP1L (ENSPSMG00000006681) #18	FTO (ENSPSMG00000006897) #19	IRX3 (ENSPSMG00000006920) #21	IRX5 (ENSPSMG00000006925) #22
Coquerels sifaka	MODERN SPECIES	539											RBL2 (ENSPCOG00000019869) #16	AKTIP (ENSPCOG00000018375) #17	RPGRIP1L (ENSPCOG00000015539) #18	FTO (ENSPCOG00000021567) #19	IRX3 (ENSPCOG00000020702) #21	IRX5 (ENSPCOG00000023958) #22	IRX6 (ENSPCOG00000019362) #23	MMP2 (ENSPCOG00000015249) #24	LPCAT2 (ENSPCOG00000019670) #25
Mouse lemur	MODERN SPECIES	12	ORC6 (ENSMICG00000028393)	VPS35 (ENSMICG00000011393)	SNX20 (ENSMICG00000044589) #8	NOD2 (ENSMICG00000008172) #9	CYLD (ENSMICG00000008179) #10	SALL1 (ENSMICG00000036486) #11	TOX3 (ENSMICG00000014881) #12	CHD9 (ENSMICG00000016679) #15	ENSMICG00000009260	RBL2 (ENSMICG00000016772) #16	ENSMICG00000010810 #17	RPGRIP1L (ENSMICG00000016808) #18	ENSMICG00000038175	FTO (ENSMICG00000016837) #19	IRX3 (ENSMICG00000016860) #21	IRX5 (ENSMICG00000027848) #22	IRX6 (ENSMICG00000003780) #23	MMP2 (ENSMICG00000003792) #24	LPCAT2 (ENSMICG00000003798) #25	SLC6A2 (ENSMICG00000003810) #26	ENSMICG00000003822 #27
Bushbaby	MODERN SPECIES	173	TENT4B (ENSOGAG00000011282)	ADCY7 (ENSOGAG00000011284)	BRD7 (ENSOGAG00000011289)	NKD1 (ENSOGAG00000024948) #7	SNX20 (ENSOGAG00000014652) #8	NOD2 (ENSOGAG00000014655) #9	CYLD (ENSOGAG00000014666) #10	SALL1 (ENSOGAG00000027316) #11	TOX3 (ENSOGAG00000009531) #12	CHD9 (ENSOGAG00000002110) #15	RBL2 (ENSOGAG00000014491) #16	AKTIP (ENSOGAG00000014495) #17	RPGRIP1L (ENSOGAG00000005128) #18	FTO (ENSOGAG00000005135) #19	IRX3 (ENSOGAG00000029236) #21	IRX5 (ENSOGAG00000004133) #22	IRX6 (ENSOGAG00000026649) #23	MMP2 (ENSOGAG00000030370) #24	LPCAT2 (ENSOGAG00000004221) #25	SLC6A2 (ENSOGAG00000004224) #26	ENSOGAG00000012518	ENSOGAG00000014900	CES5A (ENSOGAG00000012524)	ENSOGAG00000030943	ENSOGAG00000027139 #28	AMFR (ENSOGAG00000014884) #29	NUDT21 (ENSOGAG00000014888) #30	OGFOD1 (ENSOGAG00000014894) #31	BBS2 (ENSOGAG00000014898) #32	MT3 (ENSOGAG00000004806) #34	ENSOGAG00000027659 ##33
Euarchontoglires_A	ANCESTRAL SPECIES	7	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00390000008759	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000158564	ENSGT00940000154623 #27	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33
Tree shrew	MODERN SPECIES	4104																IRX5 (ENSTBEG00000005553) #22
Glires	ANCESTRAL SPECIES	6	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000158564.c.b	ENSGT00940000154623 #27	ENSGT00940000158564.c.a	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32
Lagomorpha	ANCESTRAL SPECIES	48										ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000158564.d	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33	ENSGT00950000182967.a.b #34	ENSGT00950000182967.a.a.a.a.b.a ##33	ENSGT00950000182967.a.a.a.a.a.a #36
Rabbit	MODERN SPECIES	16	FKBP2 (ENSOCUG00000025678)	GARRE1 (ENSOCUG00000002236)	GPI (ENSOCUG00000001455)	UBA2 (ENSOCUG00000001464)	ENSOCUG00000004364	ENSOCUG00000023470	ENSOCUG00000024882	TOX3 (ENSOCUG00000001546) #12	ENSOCUG00000031625	ENSOCUG00000038351 #15	ENSOCUG00000001016 #15	RBL2 (ENSOCUG00000006354) #16	AKTIP (ENSOCUG00000002885) #17	RPGRIP1L (ENSOCUG00000001738) #18	FTO (ENSOCUG00000001741) #19	IRX5 (ENSOCUG00000003240) #22	IRX6 (ENSOCUG00000004079) #23	MMP2 (ENSOCUG00000006714) #24	LPCAT2 (ENSOCUG00000006719) #25	SLC6A2 (ENSOCUG00000017310) #26	ENSOCUG00000038633	ENSOCUG00000006737	ENSOCUG00000022830	CES5A (ENSOCUG00000006744)	ENSOCUG00000034838	ENSOCUG00000017203 #28	AMFR (ENSOCUG00000017212) #29	ENSOCUG00000017224 #30	OGFOD1 (ENSOCUG00000017235) #31	BBS2 (ENSOCUG00000017254) #32	ENSOCUG00000021126 ##33
Pika	MODERN SPECIES	5629																IRX5 (ENSOPRG00000003007) #22
Rodentia	ANCESTRAL SPECIES	8	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000158564.c.b	ENSGT00940000158564.c.a	ENSGT00940000154623 #27	ENSGT00940000158564.d	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31
Rodentia_B	ANCESTRAL SPECIES	21	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000158564.c.b	ENSGT00940000158564.c.a.e	ENSGT00940000154623 #27	ENSGT00940000158564.c.a.f	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32
Myomorpha	ANCESTRAL SPECIES	22	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000158564.c.b	ENSGT00940000158564.c.a.e	ENSGT00940000154623.g #27	ENSGT00940000158564.c.a.f	ENSGT00940000154623.h #27	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31
Muroidea	ANCESTRAL SPECIES	19	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000158564.c.b	ENSGT00940000158564.c.a.e.a	ENSGT00940000154623.g.a #27	ENSGT00940000158564.c.a.f	ENSGT00940000154623.g.b #27	ENSGT00940000154623.h #27	ENSGT00940000158564.c.a.e.b	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000156482 #29
Muroidea_A	ANCESTRAL SPECIES	16	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000158564.c.b	ENSGT00940000154623.g.a.b #27	ENSGT00940000154623.g.a.a #27	ENSGT00940000158564.c.a.f.b	ENSGT00940000158564.c.a.f.a	ENSGT00940000154623.g.b #27	ENSGT00940000154623.h #27	ENSGT00940000158564.c.a.e.b	ENSGT00940000161596	ENSGT00940000155883.a.a #28
Cricetidae	ANCESTRAL SPECIES	7	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00390000015797.d	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000158564.c.b	ENSGT00940000154623.g.a.b #27	ENSGT00940000154623.g.a.a #27	ENSGT00940000158564.c.a.f.b	ENSGT00940000158564.c.a.f.a	ENSGT00940000154623.g.b #27	ENSGT00940000154623.h #27	ENSGT00940000158564.c.a.e.b	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000156482 #29
Cricetinae	ANCESTRAL SPECIES	16	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938.s #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00390000015797.d	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000158564.c.b	ENSGT00940000154623.g.a.b #27	ENSGT00940000154623.g.a.a #27	ENSGT00940000158564.c.a.f.b	ENSGT00940000158564.c.a.f.a	ENSGT00940000154623.h #27	ENSGT00940000158564.c.a.e.b	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000156482 #29	ENSGT00390000015814 #30
Golden Hamster	MODERN SPECIES	706	Brd7 (ENSMAUG00000000695)	Nkd1 (ENSMAUG00000000515) #7	Snx20 (ENSMAUG00000020254) #8	Nod2 (ENSMAUG00000004325) #9	Cyld (ENSMAUG00000001344) #10	ENSMAUG00000018753	Sall1 (ENSMAUG00000019093) #11	Tox3 (ENSMAUG00000000550) #12	ENSMAUG00000018971	ENSMAUG00000011087 #15	ENSMAUG00000000526 #15	Rbl2 (ENSMAUG00000014633) #16	Rpgrip1l (ENSMAUG00000017292) #18	Fto (ENSMAUG00000000439) #19	Irx3 (ENSMAUG00000017323) #21	Irx5 (ENSMAUG00000007656) #22	Irx6 (ENSMAUG00000009996) #23	Mmp2 (ENSMAUG00000010513) #24	Lpcat2 (ENSMAUG00000016612) #25	Slc6a2 (ENSMAUG00000004570) #26	Ces1a (ENSMAUG00000011697)	ENSMAUG00000013993 #27	Ces1d (ENSMAUG00000014951) #27	Ces1e (ENSMAUG00000001475)	Ces1g (ENSMAUG00000008736) #27	ENSMAUG00000001626	ENSMAUG00000018631 #27	ENSMAUG00000001825	ENSMAUG00000000221	Gnao1 (ENSMAUG00000000422) #28	ENSMAUG00000018333 #29
Chinese hamster chok1gshd	MODERN SPECIES	112	Cyld (ENSCGRG00001000533) #10	ENSCGRG00001019423	ENSCGRG00001023314 #11	Tox3 (ENSCGRG00001021816) #12	ENSCGRG00001001946	ENSCGRG00001010471	Gm19935 (ENSCGRG00001012263) #14	ENSCGRG00001012667	Chd9 (ENSCGRG00001016150) #15	Rbl2 (ENSCGRG00001012793) #16	ENSCGRG00001024361 #17	ENSCGRG00001013457	Rpgrip1l (ENSCGRG00001020196) #18	Fto (ENSCGRG00001013545) #19	Irx3 (ENSCGRG00001022254) #21	Irx5 (ENSCGRG00001019317) #22	ENSCGRG00001021640	Irx6 (ENSCGRG00001005135) #23	Mmp2 (ENSCGRG00001020567) #24	Lpcat2 (ENSCGRG00001018067) #25	Slc6a2 (ENSCGRG00001015472) #26	Ces1a (ENSCGRG00001017007)	ENSCGRG00001013949 #27	ENSCGRG00001017957	Ces1d (ENSCGRG00001025029) #27	Ces1e (ENSCGRG00001019039)	ENSCGRG00001020924 #27	ENSCGRG00001014097	ENSCGRG00001015719	ENSCGRG00001001005 #27	ENSCGRG00001015198
Cricetidae_B	ANCESTRAL SPECIES	5	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00390000015797.d	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000158564.c.b	ENSGT00940000154623.g.a.b #27	ENSGT00940000154623.g.a.a #27	ENSGT00940000158564.c.a.f.b	ENSGT00940000158564.c.a.f.a	ENSGT00940000154623.g.b #27	ENSGT00940000154623.h #27	ENSGT00940000158564.c.a.e.b	ENSGT00940000161596	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29
Northern American deer mouse	MODERN SPECIES	18	Snx20 (ENSPEMG00000015231) #8	Nod2 (ENSPEMG00000016933) #9	Cyld (ENSPEMG00000011322) #10	Sall1 (ENSPEMG00000012331) #11	ENSPEMG00000005035	ENSPEMG00000026839	Tox3 (ENSPEMG00000019689) #12	Gm19935 (ENSPEMG00000026446) #14	ENSPEMG00000028298	Chd9 (ENSPEMG00000021464) #15	Rbl2 (ENSPEMG00000021671) #16	Aktip (ENSPEMG00000022468) #17	Rpgrip1l (ENSPEMG00000021815) #18	Fto (ENSPEMG00000021137) #19	Irx3 (ENSPEMG00000022357) #21	Irx5 (ENSPEMG00000021761) #22	Irx6 (ENSPEMG00000022413) #23	Mmp2 (ENSPEMG00000023486) #24	Lpcat2 (ENSPEMG00000024158) #25	Slc6a2 (ENSPEMG00000021618) #26	Ces1a (ENSPEMG00000022228)	ENSPEMG00000021329 #27	Ces1d (ENSPEMG00000023728) #27	Ces1e (ENSPEMG00000022097)	Ces1f (ENSPEMG00000018051)	Ces1g (ENSPEMG00000016446) #27	Ces1h (ENSPEMG00000019945) #27	ENSPEMG00000028606	Ces5a (ENSPEMG00000019578)	ENSPEMG00000001008 ##28	Amfr (ENSPEMG00000024848) #29
Prairie vole	MODERN SPECIES	137					ENSMOCG00000011490	ENSMOCG00000010137	ENSMOCG00000019154	ENSMOCG00000018583 #15	ENSMOCG00000016093	ENSMOCG00000010691 #15	Rbl2 (ENSMOCG00000002758) #16	Aktip (ENSMOCG00000000125) #17	Rpgrip1l (ENSMOCG00000002757) #18	Fto (ENSMOCG00000012365) #19	Irx3 (ENSMOCG00000001570) #21	Irx5 (ENSMOCG00000000963) #22	Irx6 (ENSMOCG00000000419) #23	Mmp2 (ENSMOCG00000000066) #24	Lpcat2 (ENSMOCG00000010966) #25	SLC6A2 (ENSMOCG00000016144) #26	Ces1a (ENSMOCG00000010710)	ENSMOCG00000000069 #27	ENSMOCG00000008974 #27
Murinae	ANCESTRAL SPECIES	15	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000158564.c.b	ENSGT00940000158564.c.a.e.a	ENSGT00940000154623.g.a.b #27	ENSGT00940000154623.g.a.a #27	ENSGT00940000158564.c.a.f.b	ENSGT00940000158564.c.a.f.a	ENSGT00940000154623.g.b #27	ENSGT00940000154623.h #27	ENSGT00940000161596	ENSGT00940000155883.a.a #28
Mus	ANCESTRAL SPECIES	6	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000158564.c.b	ENSGT00940000154623.g.a.b.a #27	ENSGT00940000154623.g.a.b.b #27	ENSGT00940000154623.g.a.a #27	ENSGT00940000158564.c.a.f.b	ENSGT00940000158564.c.a.f.a	ENSGT00940000154623.g.b #27	ENSGT00940000154623.h #27	ENSGT00940000161596	ENSGT00940000155883.a.b ##28
Mus_A	ANCESTRAL SPECIES	8	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00900000143414	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000158564.c.b	ENSGT00940000154623.g.a.b.a #27	ENSGT00940000154623.g.a.b.b #27	ENSGT00940000154623.g.a.a #27	ENSGT00940000158564.c.a.f.b	ENSGT00940000158564.c.a.f.a	ENSGT00940000154623.g.b #27	ENSGT00940000154623.h #27	ENSGT00940000161596	ENSGT00940000155883.a.a #28
Mus_B	ANCESTRAL SPECIES	6	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00900000143414	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000158564.c.b	ENSGT00940000154623.g.a.b.a #27	ENSGT00940000154623.g.a.b.b #27	ENSGT00940000154623.g.a.a #27	ENSGT00940000158564.c.a.f.b	ENSGT00940000158564.c.a.f.a	ENSGT00940000154623.g.b #27	ENSGT00940000154623.h #27	ENSGT00940000161596	ENSGT00940000155883.a.a #28
Mus_C	ANCESTRAL SPECIES	5	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00900000143414	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000158564.c.b	ENSGT00940000154623.g.a.b.a #27	ENSGT00940000154623.g.a.b.b #27	ENSGT00940000154623.g.a.a #27	ENSGT00940000158564.c.a.f.b	ENSGT00940000158564.c.a.f.a	ENSGT00940000154623.g.b #27	ENSGT00940000154623.h #27	ENSGT00940000161596	ENSGT00940000155883.a.a #28
spretus	MODERN SPECIES	17	Brd7 (MGP_SPRETEiJ_G0032475)	Nkd1 (MGP_SPRETEiJ_G0032476) #7	Snx20 (MGP_SPRETEiJ_G0032477) #8	Nod2 (MGP_SPRETEiJ_G0032478) #9	Cyld (MGP_SPRETEiJ_G0032479) #10	Sall1 (MGP_SPRETEiJ_G0032480) #11	MGP_SPRETEiJ_G0032481	Tox3 (MGP_SPRETEiJ_G0032482) #12	Chd9 (MGP_SPRETEiJ_G0032483) #15	MGP_SPRETEiJ_G0032484	Rbl2 (MGP_SPRETEiJ_G0032485) #16	Aktip (MGP_SPRETEiJ_G0032486) #17	Rpgrip1l (MGP_SPRETEiJ_G0032487) #18	Fto (MGP_SPRETEiJ_G0032488) #19	Irx3 (MGP_SPRETEiJ_G0032489) #21	Irx5 (MGP_SPRETEiJ_G0032490) #22	Irx6 (MGP_SPRETEiJ_G0032491) #23	Mmp2 (MGP_SPRETEiJ_G0032492) #24	Lpcat2 (MGP_SPRETEiJ_G0032493) #25	Capns2 (MGP_SPRETEiJ_G0032494)	Slc6a2 (MGP_SPRETEiJ_G0032495) #26	Ces1a (MGP_SPRETEiJ_G0032496)	Ces1b (MGP_SPRETEiJ_G0032497) #27	Ces1c (MGP_SPRETEiJ_G0032498) #27	Ces1d (MGP_SPRETEiJ_G0032499) #27	Ces1e (MGP_SPRETEiJ_G0032500)	Ces1f (MGP_SPRETEiJ_G0032501)	Ces1g (MGP_SPRETEiJ_G0032502) #27	MGP_SPRETEiJ_G0032503 #27	Ces5a (MGP_SPRETEiJ_G0032504)	MGP_SPRETEiJ_G0032505 ##28
Steppe mouse	MODERN SPECIES	3333	Nod2 (ENSMSIG00000023038) #9	Cyld (ENSMSIG00000022860) #10	Sall1 (ENSMSIG00000022842) #11	ENSMSIG00000022807	ENSMSIG00000022804	Tox3 (ENSMSIG00000022770) #12	ENSMSIG00000022761	Gm19935 (ENSMSIG00000022743) #14	Chd9 (ENSMSIG00000022627) #15	Aktip (ENSMSIG00000022576) #17	Rbl2 (ENSMSIG00000022400) #16	Rpgrip1l (ENSMSIG00000022275) #18	Fto (ENSMSIG00000022229) #19	Irx3 (ENSMSIG00000022187) #21	ENSMSIG00000022154	ENSMSIG00000022098 #22	Irx6 (ENSMSIG00000022060) #23	Mmp2 (ENSMSIG00000022035) #24	Lpcat2 (ENSMSIG00000021980) #25	Slc6a2 (ENSMSIG00000021915) #26	Ces1a (ENSMSIG00000021890)
Mouse	MODERN SPECIES	17	Adcy7 (ENSMUSG00000031659)	Brd7 (ENSMUSG00000031660)	Nkd1 (ENSMUSG00000031661) #7	Snx20 (ENSMUSG00000031662) #8	Nod2 (ENSMUSG00000055994) #9	Cyld (ENSMUSG00000036712) #10	Sall1 (ENSMUSG00000031665) #11	Tox3 (ENSMUSG00000043668) #12	Gm19935 (ENSMUSG00000110332) #14	Chd9 (ENSMUSG00000056608) #15	Rbl2 (ENSMUSG00000031666) #16	Aktip (ENSMUSG00000031667) #17	Rpgrip1l (ENSMUSG00000033282) #18	Fto (ENSMUSG00000055932) #19	Irx3 (ENSMUSG00000031734) #21	Irx5 (ENSMUSG00000031737) #22	Irx6 (ENSMUSG00000031738) #23	Mmp2 (ENSMUSG00000031740) #24	Lpcat2 (ENSMUSG00000033192) #25	Capns2 (ENSMUSG00000078144)	Slc6a2 (ENSMUSG00000055368) #26	Ces1a (ENSMUSG00000071047)	Ces1b (ENSMUSG00000078964) #27	Ces1c (ENSMUSG00000057400) #27	Ces1d (ENSMUSG00000056973) #27	Ces1e (ENSMUSG00000061959)	Ces1f (ENSMUSG00000031725)	Ces1g (ENSMUSG00000057074) #27	Ces1h (ENSMUSG00000074156) #27	Ces5a (ENSMUSG00000058019)	Gnao1 (ENSMUSG00000031748) #28
Ryukyu mouse	MODERN SPECIES	17	Adcy7 (MGP_CAROLIEiJ_G0031356)	Brd7 (MGP_CAROLIEiJ_G0031357)	Nkd1 (MGP_CAROLIEiJ_G0031358) #7	Snx20 (MGP_CAROLIEiJ_G0031359) #8	Nod2 (MGP_CAROLIEiJ_G0031360) #9	Cyld (MGP_CAROLIEiJ_G0031361) #10	Sall1 (MGP_CAROLIEiJ_G0031362) #11	Tox3 (MGP_CAROLIEiJ_G0031363) #12	Chd9 (MGP_CAROLIEiJ_G0031364) #15	MGP_CAROLIEiJ_G0031365	Rbl2 (MGP_CAROLIEiJ_G0031366) #16	Aktip (MGP_CAROLIEiJ_G0031367) #17	Rpgrip1l (MGP_CAROLIEiJ_G0031368) #18	Fto (MGP_CAROLIEiJ_G0031369) #19	Irx3 (MGP_CAROLIEiJ_G0031370) #21	Irx5 (MGP_CAROLIEiJ_G0031371) #22	Irx6 (MGP_CAROLIEiJ_G0031372) #23	Mmp2 (MGP_CAROLIEiJ_G0031373) #24	Lpcat2 (MGP_CAROLIEiJ_G0031374) #25	Capns2 (MGP_CAROLIEiJ_G0031375)	Slc6a2 (MGP_CAROLIEiJ_G0031376) #26	Ces1a (MGP_CAROLIEiJ_G0031377)	Ces1b (MGP_CAROLIEiJ_G0031378) #27	Ces1c (MGP_CAROLIEiJ_G0031379) #27	Ces1d (MGP_CAROLIEiJ_G0031380) #27	Ces1e (MGP_CAROLIEiJ_G0031381)	Ces1f (MGP_CAROLIEiJ_G0031382)	Ces1g (MGP_CAROLIEiJ_G0031383) #27	MGP_CAROLIEiJ_G0031384 #27	Ces5a (MGP_CAROLIEiJ_G0031385)	MGP_CAROLIEiJ_G0031386 ##28
Shrew mouse	MODERN SPECIES	12	Adcy7 (MGP_PahariEiJ_G0022955)	Brd7 (MGP_PahariEiJ_G0022956)	Nkd1 (MGP_PahariEiJ_G0022957) #7	Snx20 (MGP_PahariEiJ_G0022958) #8	Nod2 (MGP_PahariEiJ_G0022959) #9	Cyld (MGP_PahariEiJ_G0022960) #10	Sall1 (MGP_PahariEiJ_G0022961) #11	Tox3 (MGP_PahariEiJ_G0022962) #12	MGP_PahariEiJ_G0022963	Chd9 (MGP_PahariEiJ_G0022964) #15	Rbl2 (MGP_PahariEiJ_G0022965) #16	Aktip (MGP_PahariEiJ_G0022966) #17	Rpgrip1l (MGP_PahariEiJ_G0022967) #18	Fto (MGP_PahariEiJ_G0022968) #19	Irx3 (MGP_PahariEiJ_G0022969) #21	Irx5 (MGP_PahariEiJ_G0022970) #22	Irx6 (MGP_PahariEiJ_G0022971) #23	Mmp2 (MGP_PahariEiJ_G0022972) #24	Lpcat2 (MGP_PahariEiJ_G0022973) #25	Capns2 (MGP_PahariEiJ_G0022974)	Slc6a2 (MGP_PahariEiJ_G0022975) #26	Ces1a (MGP_PahariEiJ_G0022976)	MGP_PahariEiJ_G0022977 #27	MGP_PahariEiJ_G0022978 #27	Ces1d (MGP_PahariEiJ_G0022979) #27	Ces1e (MGP_PahariEiJ_G0022980)	Ces1g (MGP_PahariEiJ_G0022982) #27	MGP_PahariEiJ_G0022983 #27	Ces5a (MGP_PahariEiJ_G0022984)	MGP_PahariEiJ_G0022985 ##28	Amfr (MGP_PahariEiJ_G0022986) #29
Rat	MODERN SPECIES	10	Adcy7 (ENSRNOG00000014776)	Brd7 (ENSRNOG00000014419)	Nkd1 (ENSRNOG00000014293) #7	Snx20 (ENSRNOG00000014202) #8	Nod2 (ENSRNOG00000014124) #9	Cyld (ENSRNOG00000014048) #10	Sall1 (ENSRNOG00000013907) #11	ENSRNOG00000069574	Tox3 (ENSRNOG00000028649) #12	Chd9 (ENSRNOG00000049302) #15	Rbl2 (ENSRNOG00000012153) #16	Aktip (ENSRNOG00000011956) #17	Rpgrip1l (ENSRNOG00000011829) #18	Fto (ENSRNOG00000011728) #19	Irx3 (ENSRNOG00000011533) #21	Irx5 (ENSRNOG00000011180) #22	Irx6 (ENSRNOG00000011037) #23	Mmp2 (ENSRNOG00000016695) #24	Lpcat2 (ENSRNOG00000016643) #25	Slc6a2 (ENSRNOG00000016311) #26	Ces1a (ENSRNOG00000039725)	Ces1c (ENSRNOG00000069004)	Ces1d (ENSRNOG00000015438) #27	LOC100909916 (ENSRNOG00000032666)	ENSRNOG00000062467	Rasd2 (ENSRNOG00000014761)	Mcm5 (ENSRNOG00000014336)	Hmox1 (ENSRNOG00000014117)	Tom1 (ENSRNOG00000014093)	Hmgxb4 (ENSRNOG00000013878)	Isx (ENSRNOG00000039808)
Upper Galilee mountains blind mole rat	MODERN SPECIES	692								ENSNGAG00000019957 #15	ENSNGAG00000015820 #15	Rbl2 (ENSNGAG00000019402) #16	Aktip (ENSNGAG00000019364) #17	Rpgrip1l (ENSNGAG00000021122) #18	Fto (ENSNGAG00000000461) #19	ENSNGAG00000011338	Irx3 (ENSNGAG00000011571) #21	Irx5 (ENSNGAG00000015150) #22	Irx6 (ENSNGAG00000016030) #23	Mmp2 (ENSNGAG00000020203) #24	Lpcat2 (ENSNGAG00000000308) #25	Slc6a2 (ENSNGAG00000016768) #26	Ces1a (ENSNGAG00000018579)	ENSNGAG00000013211	ENSNGAG00000009933
Lesser Egyptian jerboa	MODERN SPECIES	114	Brd7 (ENSJJAG00000024144)	Nkd1 (ENSJJAG00000016347) #7	Snx20 (ENSJJAG00000022175) #8	Nod2 (ENSJJAG00000017441) #9	Cyld (ENSJJAG00000013829) #10	ENSJJAG00000022677 #11	Tox3 (ENSJJAG00000022737) #12	ENSJJAG00000015094	ENSJJAG00000010948 #15	ENSJJAG00000015741 #15	Rbl2 (ENSJJAG00000021032) #16	Aktip (ENSJJAG00000007409) #17	Rpgrip1l (ENSJJAG00000021992) #18	Fto (ENSJJAG00000013186) #19	Irx3 (ENSJJAG00000021503) #21	Irx5 (ENSJJAG00000016102) #22	Irx6 (ENSJJAG00000003082) #23	Mmp2 (ENSJJAG00000010703) #24	Lpcat2 (ENSJJAG00000001079) #25	Slc6a2 (ENSJJAG00000022105) #26	Ces1a (ENSJJAG00000012358)	ENSJJAG00000010509	ENSJJAG00000013336	Ces1h (ENSJJAG00000023786) #27	Ces5a (ENSJJAG00000017809)	ENSJJAG00000010085	Parm1 (ENSJJAG00000020965)	Rchy1 (ENSJJAG00000017374)	Odaph (ENSJJAG00000013778)	Cdkl2 (ENSJJAG00000021303)	G3bp2 (ENSJJAG00000016557)
Kangaroo rat	MODERN SPECIES	425	Brd7 (ENSDORG00000010508)	Nkd1 (ENSDORG00000008529) #7	ENSDORG00000029324 #8	Nod2 (ENSDORG00000026607) #9	Cyld (ENSDORG00000004192) #10	ENSDORG00000004249 #11	Tox3 (ENSDORG00000003305) #12	ENSDORG00000026215 #15	ENSDORG00000008523 #15	Rbl2 (ENSDORG00000009516) #16	Aktip (ENSDORG00000009519) #17	Rpgrip1l (ENSDORG00000009323) #18	ENSDORG00000023916	Fto (ENSDORG00000009325) #19	Irx3 (ENSDORG00000011798) #21	Irx5 (ENSDORG00000005903) #22	Irx6 (ENSDORG00000012265) #23	ENSDORG00000013188 #24	Lpcat2 (ENSDORG00000013193) #25	Capns2 (ENSDORG00000027062)	Slc6a2 (ENSDORG00000009330) #26	ENSDORG00000007543 #27	ENSDORG00000004899	ENSDORG00000004900	Gnao1 (ENSDORG00000024668) #28	Amfr (ENSDORG00000005127) #29	Nudt21 (ENSDORG00000005129) #30	Ogfod1 (ENSDORG00000005131) #31	Bbs2 (ENSDORG00000005133) #32	Mt4 (ENSDORG00000029365) #33	ENSDORG00000026394 #34
Rodentia_A	ANCESTRAL SPECIES	6	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000158564.c.b	ENSGT00940000158564.c.a	ENSGT00940000158564.d	ENSGT00940000154623 #27	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32
Hystricomorpha	ANCESTRAL SPECIES	22	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000158564.c.b	ENSGT00940000158564.c.a.a	ENSGT00940000158564.d	ENSGT00940000154623 #27	ENSGT00940000161596	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33
Hystricomorpha_a	ANCESTRAL SPECIES	22	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000158564.c.b	ENSGT00940000154623.i.a #27	ENSGT00940000154623.j.b #27	ENSGT00940000158564.d	ENSGT00940000154623.j.a #27	ENSGT00940000161596	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32
Guinea pig	MODERN SPECIES	5	TENT4B (ENSCPOG00000011799)	ADCY7 (ENSCPOG00000003271)	BRD7 (ENSCPOG00000015462)	NKD1 (ENSCPOG00000002660) #7	SNX20 (ENSCPOG00000031640) #8	NOD2 (ENSCPOG00000010054) #9	CYLD (ENSCPOG00000010061) #10	SALL1 (ENSCPOG00000006564) #11	ENSCPOG00000003093	CHD9 (ENSCPOG00000036544) #15	RBL2 (ENSCPOG00000006507) #16	ENSCPOG00000006523	RPGRIP1L (ENSCPOG00000012922) #18	FTO (ENSCPOG00000012935) #19	IRX3 (ENSCPOG00000034825) #21	IRX5 (ENSCPOG00000011984) #22	IRX6 (ENSCPOG00000013677) #23	MMP2 (ENSCPOG00000020846) #24	LPCAT2 (ENSCPOG00000002265) #25	SLC6A2 (ENSCPOG00000002271) #26	ENSCPOG00000032917 #27	UPF3A (ENSCPOG00000006824)	CDC16 (ENSCPOG00000005324)	ENSCPOG00000030796	RASA3 (ENSCPOG00000007813)	C13orf46 (ENSCPOG00000022842)	GAS6 (ENSCPOG00000007335)	TMEM255B (ENSCPOG00000001504)	GRK1 (ENSCPOG00000013493)	ATP4B (ENSCPOG00000013488)	TFDP1 (ENSCPOG00000013486)
Hystricomorpha_b	ANCESTRAL SPECIES	15	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000158564.c.b	ENSGT00940000154623.i.a #27	ENSGT00940000154623.j.a #27	ENSGT00940000161596	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33	ENSGT00950000182967.a.b #34
Long-tailed chinchilla	MODERN SPECIES	140	ADCY7 (ENSCLAG00000006365)	BRD7 (ENSCLAG00000007993)	NKD1 (ENSCLAG00000008184) #7	SNX20 (ENSCLAG00000008955) #8	NOD2 (ENSCLAG00000009024) #9	CYLD (ENSCLAG00000010166) #10	SALL1 (ENSCLAG00000006380) #11	TOX3 (ENSCLAG00000006478) #12	CHD9 (ENSCLAG00000007137) #15	ENSCLAG00000005008	RBL2 (ENSCLAG00000005451) #16	AKTIP (ENSCLAG00000006949) #17	RPGRIP1L (ENSCLAG00000004568) #18	FTO (ENSCLAG00000013952) #19	IRX3 (ENSCLAG00000013650) #21	IRX5 (ENSCLAG00000009884) #22	IRX6 (ENSCLAG00000008231) #23	MMP2 (ENSCLAG00000004390) #24	LPCAT2 (ENSCLAG00000004725) #25	SLC6A2 (ENSCLAG00000005787) #26	ENSCLAG00000006039	CES1 (ENSCLAG00000005623) #27	CES5A (ENSCLAG00000004557)	GNAO1 (ENSCLAG00000006257) ##28	AMFR (ENSCLAG00000007397) #29	NUDT21 (ENSCLAG00000005751) #30	OGFOD1 (ENSCLAG00000006400) #31	BBS2 (ENSCLAG00000007280) #32	MT4 (ENSCLAG00000009089) #33	MT3 (ENSCLAG00000009158) #34	ENSCLAG00000009592 ##33
Degu	MODERN SPECIES	126	LCP2 (ENSODEG00000004197)	KCNMB1 (ENSODEG00000004061)	KCNIP1 (ENSODEG00000005120)	GABRP (ENSODEG00000004715)	ENSODEG00000004642	ENSODEG00000004521	TLX3 (ENSODEG00000004462)	ENSODEG00000004332	CHD9 (ENSODEG00000004466) #15	RBL2 (ENSODEG00000008958) #16	ENSODEG00000006168 #17	ENSODEG00000005860	RPGRIP1L (ENSODEG00000004573) #18	FTO (ENSODEG00000004439) #19	IRX3 (ENSODEG00000004286) #21	IRX5 (ENSODEG00000004241) #22	IRX6 (ENSODEG00000004498) #23	ENSODEG00000004399 #24	LPCAT2 (ENSODEG00000004223) #25	SLC6A2 (ENSODEG00000004072) #26	ENSODEG00000006276	ENSODEG00000005805
Naked mole-rat female	MODERN SPECIES	26	SNX20 (ENSHGLG00000004254) #8	NOD2 (ENSHGLG00000003967) #9	ENSHGLG00000005762 #10	ENSHGLG00000004288 #11	ENSHGLG00000046400 #12	ENSHGLG00000003699	ENSHGLG00000003522	ENSHGLG00000003452	ENSHGLG00000014938 #15	RBL2 (ENSHGLG00000012893) #16	AKTIP (ENSHGLG00000008426) #17	RPGRIP1L (ENSHGLG00000008154) #18	ENSHGLG00000050695	FTO (ENSHGLG00000005386) #19	IRX3 (ENSHGLG00000004630) #21	IRX5 (ENSHGLG00000004006) #22	IRX6 (ENSHGLG00000003805) #23	MMP2 (ENSHGLG00000003708) #24	LPCAT2 (ENSHGLG00000006950) #25	SLC6A2 (ENSHGLG00000006203) #26	ENSHGLG00000005501	ENSHGLG00000004357	ENSHGLG00000004035	ENSHGLG00000011693	ENSHGLG00000010650	ENSHGLG00000049685	ENSHGLG00000043285	ENSHGLG00000049439	ENSHGLG00000035649	ENSHGLG00000006887 #28	ENSHGLG00000006142
Sciuridae	ANCESTRAL SPECIES	5	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000158564.c.b	ENSGT00940000158564.c.a.c.a	ENSGT00940000158564.c.a.c.b	ENSGT00940000158564.c.a.d	ENSGT00940000158564.d	ENSGT00940000154623 #27	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30
Eurasian red squirrel	MODERN SPECIES	8	NKD1 (ENSSVLG00005025829) #7	SNX20 (ENSSVLG00005025820) #8	NOD2 (ENSSVLG00005025812) #9	CYLD (ENSSVLG00005025804) #10	SALL1 (ENSSVLG00005025799) #11	TOX3 (ENSSVLG00005025797) #12	ENSSVLG00005025795	CHD9NB (ENSSVLG00005025793) #14	CHD9 (ENSSVLG00005025759) #15	RBL2 (ENSSVLG00005025712) #16	ENSSVLG00005025703 #17	RPGRIP1L (ENSSVLG00005025692) #18	ENSSVLG00005025681	FTO (ENSSVLG00005025671) #19	IRX3 (ENSSVLG00005025657) #21	IRX5 (ENSSVLG00005025650) #22	IRX6 (ENSSVLG00005025641) #23	MMP2 (ENSSVLG00005025625) #24	LPCAT2 (ENSSVLG00005025612) #25	SLC6A2 (ENSSVLG00005025519) #26	ENSSVLG00005025374	ENSSVLG00005025224	ENSSVLG00005025115	ENSSVLG00005025030	ENSSVLG00005024975	CES1 (ENSSVLG00005024926) #27	CES5A (ENSSVLG00005024755)	ENSSVLG00005024726	GNAO1 (ENSSVLG00005024695) ##28	AMFR (ENSSVLG00005024655) #29	NUDT21 (ENSSVLG00005024630) #30
Marmotini	ANCESTRAL SPECIES	17	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000158564.c.b	ENSGT00940000158564.c.a.c.a	ENSGT00940000158564.c.a.c.b	ENSGT00940000154623 #27	ENSGT00940000158564.c.a.d	ENSGT00940000158564.d	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30
Marmotini_b	ANCESTRAL SPECIES	7	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000158564.c.b	ENSGT00940000158564.c.a.c.a	ENSGT00940000158564.c.a.c.b	ENSGT00940000154623 #27	ENSGT00940000158564.c.a.d	ENSGT00940000158564.d	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31
Arctic ground squirrel	MODERN SPECIES	99	BRD7 (ENSUPAG00010013735)	ENSUPAG00010013770	NKD1 (ENSUPAG00010013779) #7	SNX20 (ENSUPAG00010013805) #8	NOD2 (ENSUPAG00010013810) #9	CYLD (ENSUPAG00010013856) #10	SALL1 (ENSUPAG00010014078) #11	TOX3 (ENSUPAG00010014088) #12	CHD9NB (ENSUPAG00010014093) #14	CHD9 (ENSUPAG00010014099) #15	RBL2 (ENSUPAG00010014149) #16	AKTIP (ENSUPAG00010014223) #17	RPGRIP1L (ENSUPAG00010014243) #18	FTO (ENSUPAG00010014295) #19	IRX3 (ENSUPAG00010014349) #21	IRX5 (ENSUPAG00010014365) #22	IRX6 (ENSUPAG00010014372) #23	MMP2 (ENSUPAG00010014403) #24	LPCAT2 (ENSUPAG00010014437) #25	SLC6A2 (ENSUPAG00010014487) #26	ENSUPAG00010014531	ENSUPAG00010015119	ENSUPAG00010015175	ENSUPAG00010015190 #27
Squirrel	MODERN SPECIES	75	ENSSTOG00000001196	ADCY7 (ENSSTOG00000001199)	BRD7 (ENSSTOG00000024547)	NKD1 (ENSSTOG00000027729) #7	SNX20 (ENSSTOG00000031296) #8	NOD2 (ENSSTOG00000025139) #9	CYLD (ENSSTOG00000010194) #10	SALL1 (ENSSTOG00000020885) #11	TOX3 (ENSSTOG00000009587) #12	CHD9 (ENSSTOG00000022273) #15	RBL2 (ENSSTOG00000008636) #16	AKTIP (ENSSTOG00000008656) #17	RPGRIP1L (ENSSTOG00000012672) #18	FTO (ENSSTOG00000023410) #19	IRX3 (ENSSTOG00000019902) #21	IRX5 (ENSSTOG00000023408) #22	IRX6 (ENSSTOG00000015121) #23	MMP2 (ENSSTOG00000022615) #24	LPCAT2 (ENSSTOG00000011536) #25	SLC6A2 (ENSSTOG00000011549) #26	ENSSTOG00000027091	ENSSTOG00000011565	ENSSTOG00000022544	ENSSTOG00000023935	ENSSTOG00000026768	ENSSTOG00000027692	CES5A (ENSSTOG00000026351)	GNAO1 (ENSSTOG00000007746) ##28	AMFR (ENSSTOG00000007758) #29	NUDT21 (ENSSTOG00000005838) #30	OGFOD1 (ENSSTOG00000005854) #31
Alpin marmot	MODERN SPECIES	23	ADCY7 (ENSMMMG00000013505)	BRD7 (ENSMMMG00000013473)	NKD1 (ENSMMMG00000013451) #7	SNX20 (ENSMMMG00000013445) #8	NOD2 (ENSMMMG00000013415) #9	CYLD (ENSMMMG00000013093) #10	SALL1 (ENSMMMG00000013047) #11	TOX3 (ENSMMMG00000012986) #12	CHD9NB (ENSMMMG00000012935) #14	CHD9 (ENSMMMG00000012811) #15	RBL2 (ENSMMMG00000011833) #16	AKTIP (ENSMMMG00000011767) #17	RPGRIP1L (ENSMMMG00000011727) #18	FTO (ENSMMMG00000011704) #19	IRX3 (ENSMMMG00000011681) #21	IRX5 (ENSMMMG00000011673) #22	IRX6 (ENSMMMG00000011652) #23	MMP2 (ENSMMMG00000011634) #24	LPCAT2 (ENSMMMG00000011587) #25	SLC6A2 (ENSMMMG00000011536) #26	ENSMMMG00000011513	ENSMMMG00000011414	CES5A (ENSMMMG00000011355)	ENSMMMG00000011278 #28	ENSMMMG00000011267 ##28	AMFR (ENSMMMG00000011247) #29	NUDT21 (ENSMMMG00000011230) #30	OGFOD1 (ENSMMMG00000011049) #31	BBS2 (ENSMMMG00000011004) #32	MT4 (ENSMMMG00000010984) #33	ENSMMMG00000010970
Laurasiatheria	ANCESTRAL SPECIES	5	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00390000008759	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000158564	ENSGT00940000154623 #27	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000159483 #22
Hedgehog	MODERN SPECIES	15031																IRX5 (ENSEEUG00000015645) #22
Laurasiatheria_a	ANCESTRAL SPECIES	5	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000158564	ENSGT00940000154623 #27	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33
Artiodactyla	ANCESTRAL SPECIES	5	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000158564	ENSGT00940000154623.k #27	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33
Artiodactyla_a	ANCESTRAL SPECIES	4	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000158564	ENSGT00940000154623.k #27	ENSGT00940000154623.l #27	ENSGT00940000161596	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33
Camelidae	ANCESTRAL SPECIES	9	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000154623.l #27	ENSGT00940000161596	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33	ENSGT00950000182967.a.b #34	ENSGT00950000182967.a.a.a.a.a.a.m.b #36	ENSGT00950000182967.a.a.a.b ##33
Arabian camel	MODERN SPECIES	35	BRD7 (ENSCDRG00005000831)	NKD1 (ENSCDRG00005000863) #7	SNX20 (ENSCDRG00005000889) #8	NOD2 (ENSCDRG00005000930) #9	CYLD (ENSCDRG00005001037) #10	SALL1 (ENSCDRG00005001107) #11	TOX3 (ENSCDRG00005001153) #12	ENSCDRG00005001171	CHD9NB (ENSCDRG00005001186) #14	CHD9 (ENSCDRG00005001229) #15	RBL2 (ENSCDRG00005001292) #16	AKTIP (ENSCDRG00005001331) #17	RPGRIP1L (ENSCDRG00005001382) #18	FTO (ENSCDRG00005001486) #19	IRX3 (ENSCDRG00005001552) #21	IRX5 (ENSCDRG00005001574) #22	IRX6 (ENSCDRG00005001597) #23	MMP2 (ENSCDRG00005001638) #24	LPCAT2 (ENSCDRG00005001714) #25	SLC6A2 (ENSCDRG00005001765) #26	ENSCDRG00005001870 #27	CES5A (ENSCDRG00005002042)	GNAO1 (ENSCDRG00005002147) ##28	AMFR (ENSCDRG00005002229) #29	NUDT21 (ENSCDRG00005002425) #30	OGFOD1 (ENSCDRG00005002463) #31	BBS2 (ENSCDRG00005002500) #32	MT4 (ENSCDRG00005002540) #33	MT3 (ENSCDRG00005002553) #34	ENSCDRG00005002593 ##33	ENSCDRG00005002640 #36
Artiodactyla_b	ANCESTRAL SPECIES	4	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000158564	ENSGT00950000182967.a.a.a.a.b.a ##33	ENSGT00950000182967.a.b #34	ENSGT00950000182967.b #33	ENSGT00390000017113 #32	ENSGT00390000002349 #31	ENSGT00390000015814 #30	ENSGT00940000156482 #29	ENSGT00940000155883.a.b ##28	ENSGT00940000161596
Cetacea	ANCESTRAL SPECIES	6	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000158564	ENSGT00950000182967.a.a.a.a.a.a.m.b.b.a #36	ENSGT00950000182967.a.a.a.a.a.a.n #36	ENSGT00950000182967.a.b #34	ENSGT00950000182967.b #33	ENSGT00390000017113 #32	ENSGT00390000002349 #31	ENSGT00390000015814 #30	ENSGT00940000156482 #29	ENSGT00940000155883.a.a #28
Odontoceti	ANCESTRAL SPECIES	6	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000158564	ENSGT00950000182967.a.a.a.a.a.a.m.b.b.a #36	ENSGT00950000182967.a.a.a.a.a.a.n #36	ENSGT00950000182967.a.b #34	ENSGT00950000182967.b #33	ENSGT00390000017113 #32	ENSGT00390000002349 #31	ENSGT00390000015814 #30	ENSGT00940000156482 #29	ENSGT00940000155883.a.a #28
Odontoceti_a	ANCESTRAL SPECIES	7	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000158564	ENSGT00950000182967.a.a.a.a.a.a.m.b.b.b.a #36	ENSGT00950000182967.a.a.a.a.a.a.m.b.b.a #36	ENSGT00950000182967.a.a.a.a.a.a.n #36	ENSGT00950000182967.a.b #34	ENSGT00950000182967.b #33	ENSGT00390000017113 #32	ENSGT00390000002349 #31	ENSGT00390000015814 #30	ENSGT00940000156482 #29	ENSGT00940000155883.a.a #28
Odontoceti_b	ANCESTRAL SPECIES	5	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000158564	ENSGT00950000182967.a.a.a.a.a.a.m.b.b.b.a #36	ENSGT00950000182967.a.a.a.a.a.a.m.b.b.a #36	ENSGT00950000182967.a.a.a.a.a.a.n #36	ENSGT00950000182967.a.b #34	ENSGT00950000182967.b #33	ENSGT00390000017113 #32	ENSGT00390000002349 #31	ENSGT00390000015814 #30	ENSGT00940000156482 #29	ENSGT00940000155883.a.b ##28
Monodontidae	ANCESTRAL SPECIES	3	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000158564	ENSGT00950000182967.a.a.a.a.a.a.m.b.b.a #36	ENSGT00950000182967.a.a.a.a.a.a.n #36	ENSGT00950000182967.a.b #34	ENSGT00950000182967.b #33	ENSGT00390000017113 #32	ENSGT00390000002349 #31	ENSGT00390000015814 #30	ENSGT00940000156482 #29	ENSGT00940000155883.a.a #28	ENSGT00940000161596
Narwhal	MODERN SPECIES	296	BRD7 (ENSMMNG00015009678)	NKD1 (ENSMMNG00015009664) #7	SNX20 (ENSMMNG00015009652) #8	NOD2 (ENSMMNG00015009637) #9	CYLD (ENSMMNG00015009618) #10	SALL1 (ENSMMNG00015009605) #11	TOX3 (ENSMMNG00015009598) #12	CHD9NB (ENSMMNG00015009592) #14	ENSMMNG00015009586	CHD9 (ENSMMNG00015009549) #15	RBL2 (ENSMMNG00015009484) #16	AKTIP (ENSMMNG00015009460) #17	RPGRIP1L (ENSMMNG00015009433) #18	FTO (ENSMMNG00015009401) #19	IRX3 (ENSMMNG00015009381) #21	IRX5 (ENSMMNG00015009375) #22	IRX6 (ENSMMNG00015009363) #23	MMP2 (ENSMMNG00015009342) #24	LPCAT2 (ENSMMNG00015009321) #25	SLC6A2 (ENSMMNG00015009267) #26	ENSMMNG00015008888	ENSMMNG00015008701 #36	ENSMMNG00015008683 #36	MT3 (ENSMMNG00015008674) #34	MT4 (ENSMMNG00015008664) #33	BBS2 (ENSMMNG00015008642) #32	OGFOD1 (ENSMMNG00015008606) #31	NUDT21 (ENSMMNG00015008539) #30	AMFR (ENSMMNG00015008520) #29	GNAO1 (ENSMMNG00015008498) ##28	CES5A (ENSMMNG00015008472)
Beluga whale	MODERN SPECIES	3	ADCY7 (ENSDLEG00000004403)	BRD7 (ENSDLEG00000004432)	NKD1 (ENSDLEG00000004447) #7	SNX20 (ENSDLEG00000004455) #8	NOD2 (ENSDLEG00000004464) #9	CYLD (ENSDLEG00000004470) #10	SALL1 (ENSDLEG00000004477) #11	TOX3 (ENSDLEG00000004483) #12	CHD9NB (ENSDLEG00000004490) #14	CHD9 (ENSDLEG00000004714) #15	RBL2 (ENSDLEG00000006650) #16	AKTIP (ENSDLEG00000006795) #17	RPGRIP1L (ENSDLEG00000006851) #18	FTO (ENSDLEG00000007239) #19	IRX3 (ENSDLEG00000007250) #21	IRX5 (ENSDLEG00000007253) #22	IRX6 (ENSDLEG00000007256) #23	MMP2 (ENSDLEG00000007268) #24	LPCAT2 (ENSDLEG00000007275) #25	SLC6A2 (ENSDLEG00000007299) #26	ENSDLEG00000007413	ENSDLEG00000007594 #36	MT3 (ENSDLEG00000007602) #34	ENSDLEG00000007606 #33	BBS2 (ENSDLEG00000007612) #32	OGFOD1 (ENSDLEG00000007658) #31	NUDT21 (ENSDLEG00000007678) #30	AMFR (ENSDLEG00000007688) #29	GNAO1 (ENSDLEG00000007692) #28	ENSDLEG00000007698	ENSDLEG00000007702
Vaquita	MODERN SPECIES	10	ENSPSNG00000014944	BRD7 (ENSPSNG00000014996)	NKD1 (ENSPSNG00000015073) #7	SNX20 (ENSPSNG00000015147) #8	NOD2 (ENSPSNG00000015318) #9	CYLD (ENSPSNG00000015466) #10	SALL1 (ENSPSNG00000015573) #11	TOX3 (ENSPSNG00000015650) #12	CHD9NB (ENSPSNG00000015748) #14	CHD9 (ENSPSNG00000015827) #15	RBL2 (ENSPSNG00000016027) #16	AKTIP (ENSPSNG00000016106) #17	RPGRIP1L (ENSPSNG00000016190) #18	FTO (ENSPSNG00000016453) #19	IRX3 (ENSPSNG00000016643) #21	IRX5 (ENSPSNG00000016694) #22	IRX6 (ENSPSNG00000016785) #23	MMP2 (ENSPSNG00000016865) #24	LPCAT2 (ENSPSNG00000017054) #25	SLC6A2 (ENSPSNG00000017229) #26	ENSPSNG00000018070	ENSPSNG00000018207 #36	ENSPSNG00000018260 #36	ENSPSNG00000018314 #36	ENSPSNG00000018386 #36	ENSPSNG00000018417 #36	MT3 (ENSPSNG00000018451) #34	MT4 (ENSPSNG00000018491) #33	BBS2 (ENSPSNG00000018555) #32	OGFOD1 (ENSPSNG00000018634) #31	NUDT21 (ENSPSNG00000018709) #30
Sperm whale	MODERN SPECIES	8	TENT4B (ENSPCTG00005010555)	ADCY7 (ENSPCTG00005010652)	BRD7 (ENSPCTG00005010758)	NKD1 (ENSPCTG00005010867) #7	SNX20 (ENSPCTG00005010956) #8	CYLD (ENSPCTG00005011098) #10	ENSPCTG00005011229	TOX3 (ENSPCTG00005011262) #12	CHD9NB (ENSPCTG00005011329) #14	CHD9 (ENSPCTG00005011428) #15	RBL2 (ENSPCTG00005012175) #16	AKTIP (ENSPCTG00005012248) #17	RPGRIP1L (ENSPCTG00005012326) #18	FTO (ENSPCTG00005012518) #19	IRX3 (ENSPCTG00005012626) #21	IRX5 (ENSPCTG00005012662) #22	IRX6 (ENSPCTG00005012692) #23	MMP2 (ENSPCTG00005012770) #24	LPCAT2 (ENSPCTG00005012976) #25	ENSPCTG00005013156	SLC6A2 (ENSPCTG00005013248) #26	ENSPCTG00005013506	BBS2 (ENSPCTG00005014241) #32	OGFOD1 (ENSPCTG00005014362) #31	NUDT21 (ENSPCTG00005014447) #30	AMFR (ENSPCTG00005014513) #29	NUP93 (ENSPCTG00005014583)	ENSPCTG00005014685 #27	ENSPCTG00005014783	CES5A (ENSPCTG00005014889)	ENSPCTG00005015690
Blue whale	MODERN SPECIES	10	BRD7 (ENSBMSG00010014944)	ENSBMSG00010014986	NKD1 (ENSBMSG00010015016) #7	SNX20 (ENSBMSG00010015078) #8	NOD2 (ENSBMSG00010015156) #9	CYLD (ENSBMSG00010015266) #10	ENSBMSG00010015713	TOX3 (ENSBMSG00010015729) #12	CHD9NB (ENSBMSG00010015762) #14	CHD9 (ENSBMSG00010015871) #15	RBL2 (ENSBMSG00010016073) #16	AKTIP (ENSBMSG00010016110) #17	RPGRIP1L (ENSBMSG00010016229) #18	FTO (ENSBMSG00010016324) #19	IRX3 (ENSBMSG00010016401) #21	IRX5 (ENSBMSG00010016428) #22	IRX6 (ENSBMSG00010016456) #23	MMP2 (ENSBMSG00010016510) #24	LPCAT2 (ENSBMSG00010016593) #25	SLC6A2 (ENSBMSG00010016702) #26	ENSBMSG00010016986	ENSBMSG00010017039 #37	ENSBMSG00010017072 #36	ENSBMSG00010017122 #36	ENSBMSG00010017190 ##33	MT3 (ENSBMSG00010017206) #34	MT4 (ENSBMSG00010017229) #33	BBS2 (ENSBMSG00010017263) #32	OGFOD1 (ENSBMSG00010017324) #31	ENSBMSG00010017378 #30	AMFR (ENSBMSG00010017418) #29
Pecora	ANCESTRAL SPECIES	4	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000158564.e	ENSGT00950000182967.a.a.a.a.a.a.n.c #36	ENSGT00950000182967.a.a.a.a.b.a ##33	ENSGT00950000182967.a.b #34	ENSGT00950000182967.b #33	ENSGT00390000017113 #32	ENSGT00390000002349 #31	ENSGT00390000015814 #30	ENSGT00940000156482 #29	ENSGT00940000155883.a.b ##28	ENSGT00940000161596
Percora_a	ANCESTRAL SPECIES	4	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000154623.k.a.b #27	ENSGT00940000158564.e	ENSGT00940000154623.k.a.a #27	ENSGT00950000182967.a.a.a.a.b.a ##33	ENSGT00950000182967.a.b #34	ENSGT00950000182967.b #33	ENSGT00390000017113 #32	ENSGT00390000002349 #31	ENSGT00390000015814 #30	ENSGT00940000156482 #29	ENSGT00940000155883.a.b ##28
Bovidae	ANCESTRAL SPECIES	4	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00910000148543	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000154623.k.a.b #27	ENSGT00940000158564.e	ENSGT00940000154623.k.a.a #27	ENSGT00950000182967.a.a.a.a.b.a ##33	ENSGT00950000182967.a.b #34	ENSGT00950000182967.b #33	ENSGT00390000017113 #32	ENSGT00390000002349 #31	ENSGT00390000015814 #30	ENSGT00940000156482 #29	ENSGT00940000155883.a.b ##28
Caprinae	ANCESTRAL SPECIES	4	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00910000148543	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000158564.e	ENSGT00940000154623.k.a.a #27	ENSGT00950000182967.a.a.a.a.a.a.n.d.b.a.b #36	ENSGT00950000182967.a.a.a.a.a.a.n.d.a #36	ENSGT00950000182967.a.a.a.a.a.a.n.c #36	ENSGT00950000182967.a.a.a.a.b.a ##33	ENSGT00950000182967.a.a.a.a.a.b.a ##33	ENSGT00950000182967.a.b #34	ENSGT00950000182967.b #33	ENSGT00390000017113 #32	ENSGT00390000002349 #31
Goat	MODERN SPECIES	9	ENSCHIG00000023464	GPT2 (ENSCHIG00000027095)	C16orf87 (ENSCHIG00000024479)	MYLK3 (ENSCHIG00000019555)	ORC6 (ENSCHIG00000022439)	VPS35 (ENSCHIG00000025912)	SHCBP1 (ENSCHIG00000022997)	ENSCHIG00000019505	CHD9 (ENSCHIG00000021000) #15	RBL2 (ENSCHIG00000024944) #16	AKTIP (ENSCHIG00000011100) #17	ENSCHIG00000009850	RPGRIP1L (ENSCHIG00000016525) #18	FTO (ENSCHIG00000009126) #19	IRX3 (ENSCHIG00000014903) #21	IRX5 (ENSCHIG00000012181) #22	IRX6 (ENSCHIG00000020999) #23	MMP2 (ENSCHIG00000016293) #24	LPCAT2 (ENSCHIG00000021714) #25	SLC6A2 (ENSCHIG00000023734) #26	ENSCHIG00000021089	ENSCHIG00000016650 #27	ENSCHIG00000020804 #36	ENSCHIG00000026692 #36	ENSCHIG00000026788 #36	MT1B (ENSCHIG00000017153) ##33	MT3 (ENSCHIG00000019450) #34	MT4 (ENSCHIG00000023619) #33	BBS2 (ENSCHIG00000020676) #32	OGFOD1 (ENSCHIG00000013098) #31	ENSCHIG00000024870
Rambouillet Sheep	MODERN SPECIES	5	SNX20 (ENSOARG00020006621) #8	NOD2 (ENSOARG00020006729) #9	CYLD (ENSOARG00020007008) #10	ENSOARG00020007302	SALL1 (ENSOARG00020007355) #11	TOX3 (ENSOARG00020007461) #12	ENSOARG00020007504	CHD9NB (ENSOARG00020007518) #14	CHD9 (ENSOARG00020007553) #15	RBL2 (ENSOARG00020007785) #16	AKTIP (ENSOARG00020008060) #17	RPGRIP1L (ENSOARG00020008133) #18	FTO (ENSOARG00020008419) #19	ENSOARG00020008643	IRX3 (ENSOARG00020008675) #21	IRX5 (ENSOARG00020008717) #22	IRX6 (ENSOARG00020008760) #23	MMP2 (ENSOARG00020008789) #24	LPCAT2 (ENSOARG00020008951) #25	SLC6A2 (ENSOARG00020009128) #26	ENSOARG00020010668	ENSOARG00020021084 #27	MT1A (ENSOARG00020023615) #36	ENSOARG00020023634	MT1C (ENSOARG00020023648) #36	MT2 (ENSOARG00020023664) ##33	MT3 (ENSOARG00020023684) #34	MT4 (ENSOARG00020023709) #33	BBS2 (ENSOARG00020023747) #32	OGFOD1 (ENSOARG00020023911) #31	NUDT21 (ENSOARG00020024033) #30
Bovinae	ANCESTRAL SPECIES	3	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00960000189733	ENSGT00940000158043 #12	ENSGT01040000240503.B.cb.b	ENSGT00910000148543	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000154623.k.a.b #27	ENSGT00940000154623.k.a.a #27	ENSGT00950000182967.a.a.a.a.a.a.n.d.b.b #36	ENSGT00950000182967.a.a.a.a.a.a.n.d.b.a.a #36	ENSGT00950000182967.a.a.a.a.a.b.a ##33	ENSGT00950000182967.a.a.a.a.a.a.n.d.a #36	ENSGT00950000182967.a.a.a.a.a.a.n.c #36	ENSGT00950000182967.a.b #34	ENSGT00950000182967.b #33	ENSGT00390000017113 #32	ENSGT00390000002349 #31
Bos	ANCESTRAL SPECIES	4	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00910000148543	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000154623.k.a.b #27	ENSGT00940000154623.k.a.a #27	ENSGT00950000182967.a.a.a.a.a.a.n.d.b.b #36	ENSGT00950000182967.a.a.a.a.a.a.n.d.b.a.a #36	ENSGT00950000182967.a.a.a.a.a.b.a ##33	ENSGT00950000182967.a.b #34	ENSGT00950000182967.b #33	ENSGT00390000017113 #32	ENSGT00390000002349 #31	ENSGT00390000015814 #30	ENSGT00940000156482 #29
Bos_a	ANCESTRAL SPECIES	22	ENSGT00390000003561.m.c.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00910000148543	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000154623.k.a.b #27	ENSGT00390000007818.e.b.a	ENSGT00940000154623.k.a.a #27	ENSGT00950000182967.a.a.a.a.a.a.n.d.b.b #36	ENSGT00950000182967.a.a.a.a.a.a.n.d.a #36	ENSGT00950000182967.a.a.a.a.a.a.n.c #36	ENSGT00950000182967.a.a.a.a.a.b.a ##33	ENSGT00950000182967.a.b #34	ENSGT00950000182967.b #33	ENSGT00390000017113 #32	ENSGT00390000002349 #31
Domestic yak	MODERN SPECIES	12	SNX20 (ENSBGRG00000006807) #8	NOD2 (ENSBGRG00000006201) #9	CYLD (ENSBGRG00000005642) #10	SALL1 (ENSBGRG00000025421) #11	ENSBGRG00000025407 #12	ENSBGRG00000025395	ENSBGRG00000025389	ENSBGRG00000025379	CHD9 (ENSBGRG00000025060) #15	RBL2 (ENSBGRG00000024969) #16	AKTIP (ENSBGRG00000024918) #17	RPGRIP1L (ENSBGRG00000024721) #18	ENSBGRG00000024677	FTO (ENSBGRG00000024270) #19	IRX3 (ENSBGRG00000024169) #21	IRX5 (ENSBGRG00000024137) #22	IRX6 (ENSBGRG00000024080) #23	MMP2 (ENSBGRG00000023889) #24	LPCAT2 (ENSBGRG00000023829) #25	SLC6A2 (ENSBGRG00000022943) #26	ENSBGRG00000022847	ENSBGRG00000022766 #27	ENSBGRG00000022677 #36	ENSBGRG00000022662 #36	ENSBGRG00000022635 #36	MT2A (ENSBGRG00000022584) ##33	MT3 (ENSBGRG00000022541) #34	BBS2 (ENSBGRG00000022168) #32	OGFOD1 (ENSBGRG00000021866) #31	NUDT21 (ENSBGRG00000021769) #30	AMFR (ENSBGRG00000021663) #29
Wild yak	MODERN SPECIES	355							CHD9NB (ENSBMUG00000010713) #14	CHD9 (ENSBMUG00000010701) #15	RBL2 (ENSBMUG00000010579) #16	AKTIP (ENSBMUG00000010517) #17	ENSBMUG00000010496	RPGRIP1L (ENSBMUG00000010431) #18	ENSBMUG00000010323	FTO (ENSBMUG00000010305) #19	IRX3 (ENSBMUG00000010223) #21	IRX5 (ENSBMUG00000010181) #22	IRX6 (ENSBMUG00000010165) #23	MMP2 (ENSBMUG00000010148) #24	LPCAT2 (ENSBMUG00000010132) #25	SLC6A2 (ENSBMUG00000010092) #26	ENSBMUG00000009928 #27	ENSBMUG00000009918 #27
Bos_b	ANCESTRAL SPECIES		ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00390000018141.i.a.b.b.b.a.b.b.a.b.b	ENSGT00940000158043 #12	ENSGT00910000148543	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000154623.k.a.b #27	ENSGT00940000154623.k.a.a #27	ENSGT00950000182967.a.a.a.a.a.a.n.d.b.a.a #36	ENSGT00950000182967.a.a.a.a.a.a.n.c #36	ENSGT00950000182967.a.a.a.a.a.b.a ##33	ENSGT00950000182967.a.b #34	ENSGT01100000263481.n.a.b.a.b.a.b.a.a.b.a.a	ENSGT00950000182967.b #33	ENSGT00390000017113 #32	ENSGT00390000002349 #31	ENSGT00390000015814 #30
Hybrid Bos Indicus	MODERN SPECIES	9	NKD1 (ENSBIXG00005005932) #7	SNX20 (ENSBIXG00005005704) #8	NOD2 (ENSBIXG00005014215) #9	CYLD (ENSBIXG00005014346) #10	SALL1 (ENSBIXG00005006737) #11	ENSBIXG00005014430	TOX3 (ENSBIXG00005014497) #12	ENSBIXG00005014525	CHD9NB (ENSBIXG00005014531) #14	CHD9 (ENSBIXG00005014635) #15	RBL2 (ENSBIXG00005014700) #16	AKTIP (ENSBIXG00005014732) #17	RPGRIP1L (ENSBIXG00005014864) #18	FTO (ENSBIXG00005002186) #19	IRX3 (ENSBIXG00005002200) #21	IRX5 (ENSBIXG00005015036) #22	ENSBIXG00005015047	IRX6 (ENSBIXG00005002212) #23	MMP2 (ENSBIXG00005005977) #24	LPCAT2 (ENSBIXG00005015276) #25	ENSBIXG00005015326	ENSBIXG00005015357 #27	ENSBIXG00005002256 #27	ENSBIXG00005015450	ENSBIXG00005015498 #36	ENSBIXG00005002306 #36	MT1A (ENSBIXG00005015522) ##33	MT3 (ENSBIXG00005005717) #34	ENSBIXG00005015541	MT4 (ENSBIXG00005015553) #33	BBS2 (ENSBIXG00005015601) #32
Cow	MODERN SPECIES	9	BRD7 (ENSBTAG00000021575)	NKD1 (ENSBTAG00000012295) #7	SNX20 (ENSBTAG00000003961) #8	NOD2 (ENSBTAG00000020936) #9	CYLD (ENSBTAG00000006291) #10	SALL1 (ENSBTAG00000008544) #11	ENSBTAG00000051871	TOX3 (ENSBTAG00000000418) #12	ENSBTAG00000049705	CHD9 (ENSBTAG00000002287) #15	RBL2 (ENSBTAG00000016243) #16	AKTIP (ENSBTAG00000016250) #17	RPGRIP1L (ENSBTAG00000012499) #18	FTO (ENSBTAG00000012501) #19	IRX3 (ENSBTAG00000012083) #21	IRX5 (ENSBTAG00000004838) #22	IRX6 (ENSBTAG00000016407) #23	MMP2 (ENSBTAG00000019267) #24	LPCAT2 (ENSBTAG00000019272) #25	SLC6A2 (ENSBTAG00000003353) #26	CES1 (ENSBTAG00000011021) #27	ENSBTAG00000001851 #27	MT1A (ENSBTAG00000054808) #36	MT1E (ENSBTAG00000038706) #36	MT1E (ENSBTAG00000001595)	MT2A (ENSBTAG00000023659) ##33	MT3 (ENSBTAG00000016886) #34	ENSBTAG00000049147	ENSBTAG00000049538	MT4 (ENSBTAG00000015084) #33	BBS2 (ENSBTAG00000014923) #32
American bison	MODERN SPECIES	3332											RBL2 (ENSBBBG00000025483) #16	AKTIP (ENSBBBG00000006925) #17	RPGRIP1L (ENSBBBG00000009306) #18	FTO (ENSBBBG00000009307) #19	ENSBBBG00000009309	IRX5 (ENSBBBG00000009310) #22	IRX6 (ENSBBBG00000009311) #23	MMP2 (ENSBBBG00000009312) #24	LPCAT2 (ENSBBBG00000009313) #25	SLC6A2 (ENSBBBG00000009315) #26	ENSBBBG00000000145 #27	ENSBBBG00000000143 #27	ENSBBBG00000001462 #36	ENSBBBG00000009318 #36	ENSBBBG00000001463 #36	ENSBBBG00000009319 #36	MT1A (ENSBBBG00000009320) ##33	ENSBBBG00000009321	MT4 (ENSBBBG00000009323) #33	BBS2 (ENSBBBG00000009325) #32	OGFOD1 (ENSBBBG00000000142) #31
Siberian musk deer	MODERN SPECIES	1192	ADCY7 (ENSMMSG00000008792)	BRD7 (ENSMMSG00000008887)	NKD1 (ENSMMSG00000008933) #7	SNX20 (ENSMMSG00000008973) #8	NOD2 (ENSMMSG00000009067) #9	CYLD (ENSMMSG00000009139) #10	SALL1 (ENSMMSG00000009393) #11	TOX3 (ENSMMSG00000009435) #12	ENSMMSG00000009494	CHD9 (ENSMMSG00000009559) #15	RBL2 (ENSMMSG00000009982) #16	AKTIP (ENSMMSG00000010049) #17	RPGRIP1L (ENSMMSG00000010119) #18	FTO (ENSMMSG00000010603) #19	IRX3 (ENSMMSG00000010728) #21	IRX5 (ENSMMSG00000010766) #22	IRX6 (ENSMMSG00000010817) #23	MMP2 (ENSMMSG00000010869) #24	LPCAT2 (ENSMMSG00000010940) #25	SLC6A2 (ENSMMSG00000011050) #26	ENSMMSG00000012156 #27	ENSMMSG00000012191 #27	ENSMMSG00000012209 #36	ENSMMSG00000012234 #36	ENSMMSG00000012241 #36	ENSMMSG00000012266 #36	MT1A (ENSMMSG00000012273) ##33	MT3 (ENSMMSG00000012293) #34	MT4 (ENSMMSG00000012307) #33	ENSMMSG00000012329	BBS2 (ENSMMSG00000012354) #32
Yarkand deer	MODERN SPECIES	27	ADCY7 (ENSCHYG00000004827)	BRD7 (ENSCHYG00000004908)	NKD1 (ENSCHYG00000004944) #7	SNX20 (ENSCHYG00000004988) #8	NOD2 (ENSCHYG00000005036) #9	CYLD (ENSCHYG00000005179) #10	SALL1 (ENSCHYG00000005364) #11	ENSCHYG00000005452	CHD9 (ENSCHYG00000005567) #15	ENSCHYG00000005967	RBL2 (ENSCHYG00000005980) #16	AKTIP (ENSCHYG00000006066) #17	RPGRIP1L (ENSCHYG00000006115) #18	FTO (ENSCHYG00000006304) #19	IRX3 (ENSCHYG00000006454) #21	IRX5 (ENSCHYG00000006511) #22	IRX6 (ENSCHYG00000006545) #23	MMP2 (ENSCHYG00000006606) #24	LPCAT2 (ENSCHYG00000006753) #25	SLC6A2 (ENSCHYG00000006837) #26	ENSCHYG00000006954	ENSCHYG00000007377	ENSCHYG00000007395 #36	ENSCHYG00000007406 #36	ENSCHYG00000007446 #37	MT1A (ENSCHYG00000007511) ##33	MT3 (ENSCHYG00000007538) #34	MT4 (ENSCHYG00000007552) #33	BBS2 (ENSCHYG00000007581) #32	OGFOD1 (ENSCHYG00000007682) #31	NUDT21 (ENSCHYG00000008845) #30
Suina	ANCESTRAL SPECIES	2	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000158564	ENSGT00940000154623.k #27	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33	ENSGT00950000182967.a.b #34
Chacoan peccary	MODERN SPECIES	106		BRD7 (ENSCWAG00000002824)	NKD1 (ENSCWAG00000002836) #7	SNX20 (ENSCWAG00000002848) #8	NOD2 (ENSCWAG00000002862) #9	CYLD (ENSCWAG00000002909) #10	SALL1 (ENSCWAG00000002947) #11	TOX3 (ENSCWAG00000002960) #12	CHD9NB (ENSCWAG00000002973) #14	CHD9 (ENSCWAG00000003020) #15	RBL2 (ENSCWAG00000003187) #16	AKTIP (ENSCWAG00000003213) #17	RPGRIP1L (ENSCWAG00000003236) #18	FTO (ENSCWAG00000003286) #19	IRX3 (ENSCWAG00000003322) #21	IRX5 (ENSCWAG00000003331) #22	IRX6 (ENSCWAG00000007821) #23	MMP2 (ENSCWAG00000007874) #24	LPCAT2 (ENSCWAG00000008045) #25	SLC6A2 (ENSCWAG00000008247) #26	ENSCWAG00000009471	ENSCWAG00000010543 #27	CES5A (ENSCWAG00000010596)	ENSCWAG00000011221 #28	ENSCWAG00000011473 ##28	AMFR (ENSCWAG00000011517) #29	NUDT21 (ENSCWAG00000011566) #30	OGFOD1 (ENSCWAG00000011667) #31	BBS2 (ENSCWAG00000011781) #32	MT4 (ENSCWAG00000011867) #33	MT3 (ENSCWAG00000011909) #34
Pig	MODERN SPECIES	14	NKD1 (ENSSSCG00000039875) #7	SNX20 (ENSSSCG00000025741) #8	NOD2 (ENSSSCG00000038073) #9	CYLD (ENSSSCG00000040286) #10	SALL1 (ENSSSCG00000002836) #11	TOX3 (ENSSSCG00000002835) #12	ENSSSCG00000058098	CHD9NB (ENSSSCG00000055857) #14	ENSSSCG00000043977	CHD9 (ENSSSCG00000033591) #15	RBL2 (ENSSSCG00000032648) #16	AKTIP (ENSSSCG00000026181) #17	RPGRIP1L (ENSSSCG00000031652) #18	FTO (ENSSSCG00000035949) #19	IRX3 (ENSSSCG00000002831) #21	IRX5 (ENSSSCG00000032145) #22	IRX6 (ENSSSCG00000002830) #23	MMP2 (ENSSSCG00000002829) #24	LPCAT2 (ENSSSCG00000002828) #25	SLC6A2 (ENSSSCG00000002827) #26	ENSSSCG00000002825	CES5A (ENSSSCG00000034721)	ENSSSCG00000034192 #28	AMFR (ENSSSCG00000002822) #29	NUDT21 (ENSSSCG00000034521) #30	OGFOD1 (ENSSSCG00000025953) #31	SMPD3 (ENSSSCG00000002764)	PRMT7 (ENSSSCG00000002763)	SLC7A6OS (ENSSSCG00000033167)	ENSSSCG00000060951	PLA2G15 (ENSSSCG00000057510)
Laurasiatheria_b	ANCESTRAL SPECIES	5	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000158564	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33	ENSGT00950000182967.a.b #34
Carnivora	ANCESTRAL SPECIES	2	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938.i #11	ENSGT00940000155938.j #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000158564	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33	ENSGT00950000182967.a.b #34	ENSGT00950000182967.a.a.a.a.b.b ##33
Felidae	ANCESTRAL SPECIES	7	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938.i #11	ENSGT00940000155938.j #11	ENSGT00940000158043 #12	ENSGT00390000008767.b.c	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000158564	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33	ENSGT00950000182967.a.b #34	ENSGT00950000182967.a.a.a.a.a.a #36	ENSGT00950000182967.a.a.a.a.b.a ##33
Panthera	ANCESTRAL SPECIES	10	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938.i #11	ENSGT00940000155938.j #11	ENSGT00940000158043 #12	ENSGT00390000008767.b.c	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000158564	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33	ENSGT00950000182967.a.b #34	ENSGT00950000182967.a.a.a.a.a.a #36	ENSGT00390000016353
Panthera_a	ANCESTRAL SPECIES	8	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938.i #11	ENSGT00940000158043 #12	ENSGT00390000008767.b.c	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000158564	ENSGT00940000154623 #27	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33	ENSGT00950000182967.a.b #34	ENSGT00950000182967.a.a.a.a.a.a #36
leopard	MODERN SPECIES	28	ADCY7 (ENSPPRG00000024790)	BRD7 (ENSPPRG00000024677)	NKD1 (ENSPPRG00000024626) #7	SNX20 (ENSPPRG00000024487) #8	NOD2 (ENSPPRG00000024296) #9	CYLD (ENSPPRG00000023533) #10	SALL1 (ENSPPRG00000023283) #11	ENSPPRG00000023231	TOX3 (ENSPPRG00000022987) #12	CHD9 (ENSPPRG00000004801) #15	RBL2 (ENSPPRG00000005467) #16	AKTIP (ENSPPRG00000005954) #17	RPGRIP1L (ENSPPRG00000007411) #18	FTO (ENSPPRG00000008968) #19	IRX3 (ENSPPRG00000010599) #21	IRX5 (ENSPPRG00000010774) #22	IRX6 (ENSPPRG00000010817) #23	MMP2 (ENSPPRG00000012232) #24	LPCAT2 (ENSPPRG00000012494) #25	SLC6A2 (ENSPPRG00000016674) #26	ENSPPRG00000021104	CES5A (ENSPPRG00000024161)	ENSPPRG00000023992 #28	AMFR (ENSPPRG00000023893) #29	NUDT21 (ENSPPRG00000023740) #30	OGFOD1 (ENSPPRG00000023342) #31	BBS2 (ENSPPRG00000022674) #32	MT4 (ENSPPRG00000000131) #33	MT3 (ENSPPRG00000000262) #34	ENSPPRG00000000324 #36	ENSPPRG00000000676 #36
lion	MODERN SPECIES	15	BRD7 (ENSPLOG00000005652)	NKD1 (ENSPLOG00000005679) #7	SNX20 (ENSPLOG00000005801) #8	NOD2 (ENSPLOG00000005838) #9	CYLD (ENSPLOG00000005966) #10	SALL1 (ENSPLOG00000006158) #11	TOX3 (ENSPLOG00000006207) #12	ENSPLOG00000006237	CHD9NB (ENSPLOG00000006265) #14	CHD9 (ENSPLOG00000006326) #15	RBL2 (ENSPLOG00000006496) #16	AKTIP (ENSPLOG00000006580) #17	RPGRIP1L (ENSPLOG00000006625) #18	FTO (ENSPLOG00000006852) #19	IRX3 (ENSPLOG00000007008) #21	IRX5 (ENSPLOG00000007027) #22	IRX6 (ENSPLOG00000007043) #23	MMP2 (ENSPLOG00000007104) #24	LPCAT2 (ENSPLOG00000007233) #25	SLC6A2 (ENSPLOG00000007333) #26	CES1 (ENSPLOG00000007640) #27	CES5A (ENSPLOG00000007811)	ENSPLOG00000008126 #28	AMFR (ENSPLOG00000008229) #29	NUDT21 (ENSPLOG00000008307) #30	OGFOD1 (ENSPLOG00000008375) #31	BBS2 (ENSPLOG00000008750) #32	MT4 (ENSPLOG00000008955) #33	MT3 (ENSPLOG00000008986) #34	ENSPLOG00000009019 #36	ENSPLOG00000009054 #36
Cat	MODERN SPECIES	246	BRD7 (ENSFCAG00000009072)	NKD1 (ENSFCAG00000045078) #7	SNX20 (ENSFCAG00000008504) #8	NOD2 (ENSFCAG00000008505) #9	CYLD (ENSFCAG00000008506) #10	SALL1 (ENSFCAG00000024654) #11	TOX3 (ENSFCAG00000039012) #12	ENSFCAG00000052306	CHD9NB (ENSFCAG00000045813) #14	CHD9 (ENSFCAG00000022534) #15	RBL2 (ENSFCAG00000018239) #16	AKTIP (ENSFCAG00000009131) #17	RPGRIP1L (ENSFCAG00000005266) #18	FTO (ENSFCAG00000005267) #19	IRX3 (ENSFCAG00000039768) #21	IRX5 (ENSFCAG00000041752) #22	IRX6 (ENSFCAG00000013031) #23	MMP2 (ENSFCAG00000005935) #24	LPCAT2 (ENSFCAG00000027346) #25	SLC6A2 (ENSFCAG00000014317) #26	CES5A (ENSFCAG00000014321)	ENSFCAG00000039278 #28	AMFR (ENSFCAG00000008668) #29	NUDT21 (ENSFCAG00000008669) #30	OGFOD1 (ENSFCAG00000008670) #31	BBS2 (ENSFCAG00000008671) #32	MT4 (ENSFCAG00000039617) #33	ENSFCAG00000045131 ##33	NUP93 (ENSFCAG00000008675)	SLC12A3 (ENSFCAG00000008676)	HERPUD1 (ENSFCAG00000023667)
Caniformia	ANCESTRAL SPECIES	1	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938.i #11	ENSGT00940000155938.j #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000158564	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33	ENSGT00950000182967.a.b #34	ENSGT00950000182967.a.a.a.a.a.a.d #36
Canidae	ANCESTRAL SPECIES	14	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000168933	ENSGT00940000155938.i #11	ENSGT00940000155938.j #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000158564	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33	ENSGT00950000182967.a.b #34	ENSGT00950000182967.a.a.a.a.a.a.d #36
Canis_lupus	ANCESTRAL SPECIES	6	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000168933	ENSGT00940000155938.i #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000158564	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33	ENSGT00950000182967.a.b #34	ENSGT00950000182967.a.a.a.a.a.a.d #36
Dingo	MODERN SPECIES	41	BRD7 (ENSCAFG00020001425)	NKD1 (ENSCAFG00020001437) #7	SNX20 (ENSCAFG00020001482) #8	NOD2 (ENSCAFG00020001497) #9	CYLD (ENSCAFG00020001785) #10	ENSCAFG00020002827	SALL1 (ENSCAFG00020002842) #11	TOX3 (ENSCAFG00020002858) #12	CHD9 (ENSCAFG00020002879) #15	ENSCAFG00020003037	RBL2 (ENSCAFG00020003057) #16	AKTIP (ENSCAFG00020003392) #17	RPGRIP1L (ENSCAFG00020003432) #18	FTO (ENSCAFG00020003690) #19	IRX3 (ENSCAFG00020003699) #21	IRX5 (ENSCAFG00020003703) #22	IRX6 (ENSCAFG00020003712) #23	MMP2 (ENSCAFG00020003742) #24	LPCAT2 (ENSCAFG00020004051) #25	SLC6A2 (ENSCAFG00020004230) #26	ENSCAFG00020004334	ENSCAFG00020004339	ENSCAFG00020004356	ENSCAFG00020004361	ENSCAFG00020004362	ENSCAFG00020004420 #28	ENSCAFG00020004466 ##28	AMFR (ENSCAFG00020004499) #29	NUDT21 (ENSCAFG00020004953) #30	OGFOD1 (ENSCAFG00020004977) #31	BBS2 (ENSCAFG00020005292) #32
Dog	MODERN SPECIES	11	ADCY7 (ENSCAFG00845004089)	BRD7 (ENSCAFG00845003994)	NKD1 (ENSCAFG00845003953) #7	SNX20 (ENSCAFG00845003924) #8	NOD2 (ENSCAFG00845003875) #9	CYLD (ENSCAFG00845003806) #10	ENSCAFG00845003751	SALL1 (ENSCAFG00845003739) #11	TOX3 (ENSCAFG00845003688) #12	CHD9 (ENSCAFG00845003529) #15	RBL2 (ENSCAFG00845003441) #16	AKTIP (ENSCAFG00845003411) #17	RPGRIP1L (ENSCAFG00845003370) #18	FTO (ENSCAFG00845002069) #19	IRX3 (ENSCAFG00845001072) #21	IRX5 (ENSCAFG00845001045) #22	IRX6 (ENSCAFG00845000989) #23	MMP2 (ENSCAFG00845000865) #24	LPCAT2 (ENSCAFG00845000815) #25	SLC6A2 (ENSCAFG00845000709) #26	CES1 (ENSCAFG00845000453)	ENSCAFG00845000373	GNAO1 (ENSCAFG00845000319) #28	AMFR (ENSCAFG00845000150) #29	NUDT21 (ENSCAFG00845003967) #30	OGFOD1 (ENSCAFG00845003933) #31	BBS2 (ENSCAFG00845003891) #32	MT4 (ENSCAFG00845003871) #33	MT3 (ENSCAFG00845003865) #34	MT2A (ENSCAFG00845003852) ##33	MT1E (ENSCAFG00845003828) #36
Red fox	MODERN SPECIES	87	NKD1 (ENSVVUG00000019337) #7	SNX20 (ENSVVUG00000019339) #8	NOD2 (ENSVVUG00000019346) #9	CYLD (ENSVVUG00000019356) #10	ENSVVUG00000019367	ENSVVUG00000019369	ENSVVUG00000019379 #11	ENSVVUG00000019383 #11	TOX3 (ENSVVUG00000019398) #12	CHD9 (ENSVVUG00000019435) #15	RBL2 (ENSVVUG00000019450) #16	AKTIP (ENSVVUG00000019466) #17	RPGRIP1L (ENSVVUG00000019516) #18	FTO (ENSVVUG00000019536) #19	IRX3 (ENSVVUG00000019559) #21	IRX5 (ENSVVUG00000019591) #22	IRX6 (ENSVVUG00000019600) #23	ENSVVUG00000019604	MMP2 (ENSVVUG00000019637) #24	LPCAT2 (ENSVVUG00000020204) #25	SLC6A2 (ENSVVUG00000020241) #26	CES1 (ENSVVUG00000021742)	CES5A (ENSVVUG00000021745)	ENSVVUG00000021751	ENSVVUG00000021753 #28	ENSVVUG00000021756 #28	AMFR (ENSVVUG00000021766) #29	OGFOD1 (ENSVVUG00000021788) #31	NUDT21 (ENSVVUG00000021791) #30	BBS2 (ENSVVUG00000021794) #32	MT3 (ENSVVUG00000021805) #34
Caniformia_b	ANCESTRAL SPECIES	2	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938.i #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000158564	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000156482 #29	ENSGT00390000015814.`b #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33	ENSGT00950000182967.a.b #34	ENSGT00950000182967.a.a.a.a.b.b ##33	ENSGT00950000182967.a.a.a.a.a.a.c.b.b #36
Mustelinae	ANCESTRAL SPECIES	6	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938.i #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000158564	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000156482 #29	ENSGT00390000015814.`b #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33	ENSGT00950000182967.a.a.a.a.a.a.c.a #36	ENSGT00950000182967.a.a.a.a.b.a ##33	ENSGT00950000182967.a.a.a.a.a.a.c.b.a.b #36
American mink	MODERN SPECIES	2	ADCY7 (ENSNVIG00000018370)	BRD7 (ENSNVIG00000018322)	NKD1 (ENSNVIG00000018300) #7	SNX20 (ENSNVIG00000018295) #8	NOD2 (ENSNVIG00000018277) #9	CYLD (ENSNVIG00000018201) #10	SALL1 (ENSNVIG00000018193) #11	TOX3 (ENSNVIG00000018161) #12	CHD9NB (ENSNVIG00000018148) #14	CHD9 (ENSNVIG00000017677) #15	RBL2 (ENSNVIG00000017591) #16	AKTIP (ENSNVIG00000017560) #17	FTM (ENSNVIG00000017234) #18	FTO (ENSNVIG00000017171) #19	IRX3 (ENSNVIG00000017164) #21	IRX5 (ENSNVIG00000017154) #22	IRX6 (ENSNVIG00000017145) #23	MMP2 (ENSNVIG00000017094) #24	LPCAT2 (ENSNVIG00000017057) #25	SLC6A2 (ENSNVIG00000016880) #26	ENSNVIG00000016822	CES5A (ENSNVIG00000016697)	ENSNVIG00000016652 #28	AMFR (ENSNVIG00000016632) #29	CPSF5 (ENSNVIG00000016619) #30	OGFOD1 (ENSNVIG00000016578) #31	BBS2 (ENSNVIG00000016497) #32	MT4 (ENSNVIG00000016482) #33	ENSNVIG00000016447	ENSNVIG00000016431 #36	MT1B (ENSNVIG00000016405) ##33
Ferret	MODERN SPECIES	174	NKD1 (ENSMPUG00000003177) #7	SNX20 (ENSMPUG00000003184) #8	NOD2 (ENSMPUG00000003188) #9	CYLD (ENSMPUG00000003199) #10	ENSMPUG00000003260	SALL1 (ENSMPUG00000003265) #11	TOX3 (ENSMPUG00000003272) #12	ENSMPUG00000003279	CHD9 (ENSMPUG00000003285) #15	RBL2 (ENSMPUG00000003315) #16	AKTIP (ENSMPUG00000003331) #17	RPGRIP1L (ENSMPUG00000003338) #18	FTO (ENSMPUG00000003354) #19	IRX3 (ENSMPUG00000003361) #21	ENSMPUG00000003369	IRX5 (ENSMPUG00000003373) #22	IRX6 (ENSMPUG00000003378) #23	MMP2 (ENSMPUG00000003387) #24	LPCAT2 (ENSMPUG00000003397) #25	SLC6A2 (ENSMPUG00000003413) #26	ENSMPUG00000003424	ENSMPUG00000019885	CES5A (ENSMPUG00000003432)	GNAO1 (ENSMPUG00000003439) ##28	AMFR (ENSMPUG00000003445) #29	ENSMPUG00000003451 #30	OGFOD1 (ENSMPUG00000003489) #31	BBS2 (ENSMPUG00000003507) #32	MT4 (ENSMPUG00000003523) #33	ENSMPUG00000003541 #36	ENSMPUG00000003577 ##33
Ursidae	ANCESTRAL SPECIES	8	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938.i #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000158564	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000156482 #29	ENSGT00390000015814.`b #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b.b #33	ENSGT00950000182967.a.b #34	ENSGT00950000182967.a.a.a.a.b.b ##33	ENSGT00950000182967.a.a.a.a.a.a.c.b.b #36
Giant Panda	MODERN SPECIES	3	ENSAMEG00000006721 #7	SNX20 (ENSAMEG00000024024) #8	NOD2 (ENSAMEG00000006741) #9	CYLD (ENSAMEG00000006757) #10	SALL1 (ENSAMEG00000025292) #11	ENSAMEG00000028098	TOX3 (ENSAMEG00000006831) #12	ENSAMEG00000024543 #14	CHD9 (ENSAMEG00000016232) #15	RBL2 (ENSAMEG00000016277) #16	ENSAMEG00000002818	AKTIP (ENSAMEG00000016345) #17	ENSAMEG00000026555	ENSAMEG00000027895 #19	IRX3 (ENSAMEG00000016409) #21	IRX5 (ENSAMEG00000029574) #22	IRX6 (ENSAMEG00000016415) #23	MMP2 (ENSAMEG00000016417) #24	LPCAT2 (ENSAMEG00000016449) #25	SLC6A2 (ENSAMEG00000016488) #26	ENSAMEG00000016532	CES5A (ENSAMEG00000016566)	GNAO1 (ENSAMEG00000016591) ##28	AMFR (ENSAMEG00000016611) #29	NUDT21 (ENSAMEG00000016628) #30	OGFOD1 (ENSAMEG00000016644) #31	BBS2 (ENSAMEG00000016666) #32	MT4 (ENSAMEG00000027566) #33	MT3 (ENSAMEG00000024651) #34	ENSAMEG00000027860 #36	ENSAMEG00000031439 #36
Ursus	ANCESTRAL SPECIES																	ENSGT00940000159483 #22
American black bear	MODERN SPECIES	18																IRX5 (ENSUAMG00000012661) #22
Laurasiatheria_c	ANCESTRAL SPECIES	4	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000158564	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33	ENSGT00950000182967.a.b #34
Equus	ANCESTRAL SPECIES	20	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B.b #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000158564.j.a.b	ENSGT00940000158564.j.a.a.b.a	ENSGT00940000158564.j.a.a.a	ENSGT00940000158564.i.b	ENSGT00940000158564.i.a.a	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31
Donkey	MODERN SPECIES	20	BRD7 (ENSEASG00005014566)	NKD1 (ENSEASG00005014569) #7	SNX20 (ENSEASG00005025406) #8	NOD2 (ENSEASG00005014576) #9	CYLD (ENSEASG00005014600) #10	SALL1 (ENSEASG00005014602) #11	TOX3 (ENSEASG00005014606) #12	CHD9NB (ENSEASG00005026958) #14	CHD9 (ENSEASG00005014832) #15	RBL2 (ENSEASG00005018036) #16	AKTIP (ENSEASG00005018060) #17	ENSEASG00005038205 #18	ENSEASG00005018130 #18	FTO (ENSEASG00005018288) #19	IRX3 (ENSEASG00005018291) #21	IRX5 (ENSEASG00005030004) #22	IRX6 (ENSEASG00005018300) #23	MMP2 (ENSEASG00005018304) #24	LPCAT2 (ENSEASG00005018306) #25	CAPNS2 (ENSEASG00005023940)	SLC6A2 (ENSEASG00005018433) #26	ENSEASG00005024702	ENSEASG00005037473	ENSEASG00005033826	ENSEASG00005031484	ENSEASG00005025421	ENSEASG00005030636	ENSEASG00005024398	ENSEASG00005004825	CES5A (ENSEASG00005004836)	ENSEASG00005027078 #28
Horse	MODERN SPECIES	22	NKD1 (ENSECAG00000015958) #7	SNX20 (ENSECAG00000016834) #8	NOD2 (ENSECAG00000017005) #9	CYLD (ENSECAG00000007240) #10	SALL1 (ENSECAG00000011334) #11	TOX3 (ENSECAG00000011429) #12	ENSECAG00000029200 #12	CHD9 (ENSECAG00000011505) #15	ENSECAG00000050299	RBL2 (ENSECAG00000014181) #16	AKTIP (ENSECAG00000020381) #17	RPGRIP1L (ENSECAG00000022298) #18	FTO (ENSECAG00000022922) #19	IRX3 (ENSECAG00000023496) #21	ENSECAG00000049674	IRX5 (ENSECAG00000023545) #22	IRX6 (ENSECAG00000023569) #23	MMP2 (ENSECAG00000000953) #24	LPCAT2 (ENSECAG00000009649) #25	ENSECAG00000052050	SLC6A2 (ENSECAG00000011520) #26	ENSECAG00000041124	ENSECAG00000057027	ENSECAG00000057462	ENSECAG00000039827	ENSECAG00000050252	ENSECAG00000051751	CES5A (ENSECAG00000010588)	GNAO1 (ENSECAG00000013133) #28	AMFR (ENSECAG00000015773) #29	NUDT21 (ENSECAG00000001043) #30
Chiroptera	ANCESTRAL SPECIES	21	ENSGT00940000159096	ENSGT00950000183170.a.d	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000158564	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33	ENSGT00950000182967.a.b #34	ENSGT00950000182967.a.a.a.a.a.a.a.b #36
Megabat	MODERN SPECIES	4360																IRX5 (ENSPVAG00000005731) #22
Microchiroptera	ANCESTRAL SPECIES	12	ENSGT00940000159096	ENSGT00950000183170.a.d	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00980000198839 #14	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000158564	ENSGT00940000161596	ENSGT00940000155883.a.a #28	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33	ENSGT00950000182967.a.b #34	ENSGT00950000182967.a.a.a.a.a.a.a.b #36
Microbat	MODERN SPECIES	1394																IRX5 (ENSMLUG00000026571) #22	ENSMLUG00000029912 #23	MMP2 (ENSMLUG00000004000) #24	LPCAT2 (ENSMLUG00000004008) #25	ENSMLUG00000026965 #26
Greater horseshoe bat	MODERN SPECIES	6	BRD7 (ENSRFEG00010016521)	NKD1 (ENSRFEG00010016587) #7	SNX20 (ENSRFEG00010016632) #8	NOD2 (ENSRFEG00010016709) #9	CYLD (ENSRFEG00010016753) #10	SALL1 (ENSRFEG00010016793) #11	TOX3 (ENSRFEG00010016859) #12	CHD9NB (ENSRFEG00010016917) #14	CHD9 (ENSRFEG00010016945) #15	RBL2 (ENSRFEG00010017127) #16	AKTIP (ENSRFEG00010017196) #17	RPGRIP1L (ENSRFEG00010017253) #18	FTO (ENSRFEG00010017396) #19	ENSRFEG00010017608	IRX3 (ENSRFEG00010017627) #21	IRX5 (ENSRFEG00010017679) #22	IRX6 (ENSRFEG00010017729) #23	MMP2 (ENSRFEG00010017777) #24	LPCAT2 (ENSRFEG00010017976) #25	SLC6A2 (ENSRFEG00010018029) #26	ENSRFEG00010018147	CES5A (ENSRFEG00010018231)	ENSRFEG00010018679 #28	AMFR (ENSRFEG00010018751) #29	NUDT21 (ENSRFEG00010018792) #30	OGFOD1 (ENSRFEG00010018843) #31	BBS2 (ENSRFEG00010018931) #32	MT4 (ENSRFEG00010019007) #33	MT3 (ENSRFEG00010019085) #34	ENSRFEG00010019040 #36	ENSRFEG00010019103 #36
Atlantogenata	ANCESTRAL SPECIES	24	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000154623 #27	ENSGT00940000158564	ENSGT00940000161596	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33	ENSGT00950000182967.a.b #34
Xenarthra	ANCESTRAL SPECIES	377										ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000158564
Armadillo	MODERN SPECIES	1221										CHD9 (ENSDNOG00000006045) #15	RBL2 (ENSDNOG00000004897) #16	AKTIP (ENSDNOG00000004906) #17	RPGRIP1L (ENSDNOG00000004914) #18	ENSDNOG00000047481 #19	IRX3 (ENSDNOG00000012985) #21	IRX5 (ENSDNOG00000044472) #22	IRX6 (ENSDNOG00000012614) #23	MMP2 (ENSDNOG00000016816) #24	LPCAT2 (ENSDNOG00000037374) #25	SLC6A2 (ENSDNOG00000035160) #26	ENSDNOG00000001515	ENSDNOG00000041479
Afrotheria	ANCESTRAL SPECIES	44	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000154623 #27	ENSGT00940000158564	ENSGT00940000161596	ENSGT00940000155883.a.b ##28	ENSGT00940000155883.a.a #28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33
Tenrec	MODERN SPECIES	16477																IRX5 (ENSETEG00000002297) #22
Afrotheria_a	ANCESTRAL SPECIES	43	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT00940000166682	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000158960 #26	ENSGT00940000154623.n #27	ENSGT00940000158564	ENSGT00940000161596	ENSGT00940000155883.a.b ##28	ENSGT00940000155883.a.a #28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33
Elephant	MODERN SPECIES	393	ENSLAFG00000009990	ADCY7 (ENSLAFG00000009995)	BRD7 (ENSLAFG00000017854)	NKD1 (ENSLAFG00000004213) #7	SNX20 (ENSLAFG00000015658) #8	NOD2 (ENSLAFG00000014161) #9	CYLD (ENSLAFG00000014171) #10	SALL1 (ENSLAFG00000015251) #11	TOX3 (ENSLAFG00000014949) #12	CHD9 (ENSLAFG00000015374) #15	RBL2 (ENSLAFG00000009024) #16	AKTIP (ENSLAFG00000009027) #17	RPGRIP1L (ENSLAFG00000015632) #18	FTO (ENSLAFG00000015645) #19	IRX3 (ENSLAFG00000010498) #21	IRX5 (ENSLAFG00000000090) #22	IRX6 (ENSLAFG00000031625) #23	MMP2 (ENSLAFG00000003966) #24	CAPNS2 (ENSLAFG00000028051)	LPCAT2 (ENSLAFG00000003965) #25	SLC6A2 (ENSLAFG00000021409) #26	ENSLAFG00000030800	ENSLAFG00000027219	ENSLAFG00000022499	CES1 (ENSLAFG00000015358) #27	ENSLAFG00000021430	CES5A (ENSLAFG00000009405)	GNAO1 (ENSLAFG00000002314) ##28	AMFR (ENSLAFG00000017297) #29	ENSLAFG00000028465 #30	OGFOD1 (ENSLAFG00000017309) #31
Hyrax	MODERN SPECIES	7780																IRX5 (ENSPCAG00000003649) #22
Marsupialia	ANCESTRAL SPECIES	18	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000154623.o.a.a #27	ENSGT00940000154623.o.b #27	ENSGT00940000155883.a.a #28	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33	ENSGT00950000182967.a.c #34
Marsupialia_b	ANCESTRAL SPECIES	5	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000154623.o.a.a.a #27	ENSGT00940000154623.o.a.b #27	ENSGT00940000154623.o.b.a #27	ENSGT00940000155883.a.a #28	ENSGT00940000154623.o.a.a.b #27	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32
Diprotodontia	ANCESTRAL SPECIES	4	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000154623.o.a.a.a #27	ENSGT00940000154623.o.a.b #27	ENSGT00940000154623.o.b.a #27	ENSGT00940000154623.o.a.a.b #27	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33
Diprotodontia_a	ANCESTRAL SPECIES	5	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00940000160934 #9	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000154623.o.a.a.a #27	ENSGT00940000154623.o.a.b #27	ENSGT00940000154623.o.b.a #27	ENSGT00940000154623.o.a.a.b #27	ENSGT00940000155883.a.b ##28	ENSGT00940000156482 #29	ENSGT00390000015814 #30	ENSGT00390000002349 #31	ENSGT00390000017113 #32	ENSGT00950000182967.b #33
Common wonbat	MODERN SPECIES	1030	ENSVURG00010020128	NKD1 (ENSVURG00010020108) #7	SNX20 (ENSVURG00010020106) #8	NOD2 (ENSVURG00010020098) #9	CYLD (ENSVURG00010020092) #10	SALL1 (ENSVURG00010020083) #11	ENSVURG00010020073	TOX3 (ENSVURG00010020069) #12	CHD9 (ENSVURG00010020044) #15	RBL2 (ENSVURG00010020023) #16	AKTIP (ENSVURG00010020011) #17	ENSVURG00010020006	RPGRIP1L (ENSVURG00010019968) #18	FTO (ENSVURG00010019930) #19	IRX3 (ENSVURG00010019907) #21	IRX5 (ENSVURG00010019880) #22	IRX6 (ENSVURG00010019873) #23	MMP2 (ENSVURG00010019856) #24	LPCAT2 (ENSVURG00010019819) #25	SLC6A2 (ENSVURG00010019792) #26	ENSVURG00010019780 #27	ENSVURG00010019766 #27	ENSVURG00010019441 #27	ENSVURG00010019197 #27	ENSVURG00010017976 #27	GNAO1 (ENSVURG00010017913) ##28	AMFR (ENSVURG00010017894) #29	ENSVURG00010017882 #30	OGFOD1 (ENSVURG00010017872) #31	BBS2 (ENSVURG00010017855) #32	MT4 (ENSVURG00010017850) #33
koala	MODERN SPECIES	19	ADCY7 (ENSPCIG00000016804)	BRD7 (ENSPCIG00000017871)	NKD1 (ENSPCIG00000017864) #7	SNX20 (ENSPCIG00000017863) #8	NOD2 (ENSPCIG00000017861) #9	CYLD (ENSPCIG00000017853) #10	ENSPCIG00000032216	SALL1 (ENSPCIG00000017840) #11	TOX3 (ENSPCIG00000027529) #12	CHD9 (ENSPCIG00000017215) #15	RBL2 (ENSPCIG00000024344) #16	AKTIP (ENSPCIG00000024346) #17	ENSPCIG00000024347	RPGRIP1L (ENSPCIG00000024349) #18	FTO (ENSPCIG00000024376) #19	IRX5 (ENSPCIG00000013874) #22	IRX6 (ENSPCIG00000022974) #23	MMP2 (ENSPCIG00000003051) #24	LPCAT2 (ENSPCIG00000003075) #25	ENSPCIG00000033526	SLC6A2 (ENSPCIG00000003091) #26	ENSPCIG00000016283 #27	ENSPCIG00000033949 #27	ENSPCIG00000003130 #27	ENSPCIG00000003782 #27	ENSPCIG00000018611 #27
Wallaby	MODERN SPECIES	8489																IRX5 (ENSMEUG00000008376) #22
Tasmanian devil	MODERN SPECIES	1	ADCY7 (ENSSHAG00000018774)	BRD7 (ENSSHAG00000018810)	NKD1 (ENSSHAG00000028041) #7	SNX20 (ENSSHAG00000018921) #8	NOD2 (ENSSHAG00000029900) #9	CYLD (ENSSHAG00000003079) #10	SALL1 (ENSSHAG00000009477) #11	TOX3 (ENSSHAG00000022477) #12	CHD9 (ENSSHAG00000002719) #15	RBL2 (ENSSHAG00000006471) #16	AKTIP (ENSSHAG00000024810) #17	RPGRIP1L (ENSSHAG00000008212) #18	FTO (ENSSHAG00000009174) #19	IRX3 (ENSSHAG00000012619) #21	ENSSHAG00000027911	IRX5 (ENSSHAG00000006589) #22	IRX6 (ENSSHAG00000011163) #23	MMP2 (ENSSHAG00000012197) #24	LPCAT2 (ENSSHAG00000012383) #25	CAPNS2 (ENSSHAG00000028677)	SLC6A2 (ENSSHAG00000002816) #26	ENSSHAG00000005170 #27	ENSSHAG00000000745 #27	ENSSHAG00000002765 #27	ENSSHAG00000002116 #27	ENSSHAG00000023373 #28	AMFR (ENSSHAG00000032224) #29	OGFOD1 (ENSSHAG00000009768) #31	BBS2 (ENSSHAG00000009973) #32	MT4 (ENSSHAG00000024361) #33	ENSSHAG00000027119 #34
Opossum	MODERN SPECIES		SALL1 (ENSMODG00000013114) #11	ENSMODG00000043097	ENSMODG00000046352	ENSMODG00000048280	TOX3 (ENSMODG00000043801) #12	ENSMODG00000023478	CHD9 (ENSMODG00000013142) #15	ENSMODG00000028845	RBL2 (ENSMODG00000013167) #16	AKTIP (ENSMODG00000025788) #17	RPGRIP1L (ENSMODG00000013180) #18	FTO (ENSMODG00000009684) #19	IRX3 (ENSMODG00000013192) #21	ENSMODG00000047345	ENSMODG00000013200	IRX5 (ENSMODG00000013202) #22	IRX6 (ENSMODG00000013210) #23	MMP2 (ENSMODG00000013214) #24	SLC6A2 (ENSMODG00000013227) #26	ENSMODG00000025750 #27	ENSMODG00000013345	ENSMODG00000023448 #27	GNAO1 (ENSMODG00000013359) ##28	AMFR (ENSMODG00000013364) #29	NUDT21 (ENSMODG00000013371) #30	OGFOD1 (ENSMODG00000013378) #31	BBS2 (ENSMODG00000013389) #32	MT4 (ENSMODG00000050434) #33	ENSMODG00000046448	ENSMODG00000049758 #34	ENSMODG00000025754 #34
Platypus	MODERN SPECIES	2	ADCY7 (ENSOANG00000050127)	BRD7 (ENSOANG00000001329)	NKD1 (ENSOANG00000013395) #7	SNX20 (ENSOANG00000045105) #8	NOD2 (ENSOANG00000013397) #9	CYLD (ENSOANG00000013398) #10	SALL1 (ENSOANG00000048866) #11	TOX3 (ENSOANG00000013400) #12	CHD9 (ENSOANG00000013401) #15	RBL2 (ENSOANG00000013404) #16	AKTIP (ENSOANG00000013405) #17	RPGRIP1L (ENSOANG00000013406) #18	ENSOANG00000013407 #19	ENSOANG00000050066 #19	ENSOANG00000045495	IRX5 (ENSOANG00000044475) #22	ENSOANG00000029378 #23	MMP2 (ENSOANG00000011098) #24	LPCAT2 (ENSOANG00000011096) #25	SLC6A2 (ENSOANG00000011092) #26	ENSOANG00000011089	ENSOANG00000050825	ATMIN (ENSOANG00000051099)	CENPN (ENSOANG00000011086)	ENSOANG00000039813	TTC26 (ENSOANG00000005994)	FMC1 (ENSOANG00000037156)	LUC7L2 (ENSOANG00000002993)	ENSOANG00000045152	ETV6 (ENSOANG00000014578)	ENSOANG00000045395
Sauria	ANCESTRAL SPECIES	14	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT01040000241257	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000157672	ENSGT01030000235333	ENSGT00940000160211	ENSGT01050000244841.A.b.a.b.a.b	ENSGT00940000161738	ENSGT00550000075019	ENSGT00940000156131.a.b	ENSGT00940000157187	ENSGT00950000182966.B	ENSGT00940000157499
Lepidosauria	ANCESTRAL SPECIES	49	ENSGT00390000012529	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00950000182841.a
Episquamata	ANCESTRAL SPECIES	11	ENSGT00390000012529	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b.ab	ENSGT00390000012054.b.`b	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410	ENSGT00390000006293	ENSGT00940000156938	ENSGT00390000014299
Laterata	ANCESTRAL SPECIES	28	ENSGT00390000012529	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b.ab	ENSGT00390000012054.b.`b	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410	ENSGT00390000006293	ENSGT00940000156938	ENSGT00390000014299
Common wall lizard	MODERN SPECIES	16	FOXC2 (ENSPMRG00000011253)	ZDHHC7 (ENSPMRG00000011259)	ENSPMRG00000011265	CRISPLD2 (ENSPMRG00000011276)	ENSPMRG00000011284	USP10 (ENSPMRG00000011293)	ENSPMRG00000011308	ENSPMRG00000011313	KLHL36 (ENSPMRG00000011314)	COTL1 (ENSPMRG00000011318)	MEAK7 (ENSPMRG00000011322)	ATP2C2 (ENSPMRG00000011332)	RPGRIP1L (ENSPMRG00000011355) #18	FTO (ENSPMRG00000011411) #19	IRX3 (ENSPMRG00000011439) #21	IRX5 (ENSPMRG00000011443) #22	IRX6 (ENSPMRG00000011448) #23	MMP2 (ENSPMRG00000011456) #24	LPCAT2 (ENSPMRG00000011462) #25	SLC6A2 (ENSPMRG00000011472) #26	ENSPMRG00000011479	SDR42E1 (ENSPMRG00000011483)	HSD17B2 (ENSPMRG00000011487)	ENSPMRG00000011493	ENSPMRG00000011499	MPHOSPH6 (ENSPMRG00000011504)	CDH13 (ENSPMRG00000011514)	ENSPMRG00000011543	MLYCD (ENSPMRG00000011551)	HSBP1 (ENSPMRG00000011555)	KCNG4 (ENSPMRG00000011560)
Argentine black and white tegu	MODERN SPECIES	51	HEATR3 (ENSSMRG00000005192)	TENT4B (ENSSMRG00000005198)	ADCY7 (ENSSMRG00000005205)	BRD7 (ENSSMRG00000005252)	NKD1 (ENSSMRG00000005727) #7	SNX20 (ENSSMRG00000005732) #8	CYLD (ENSSMRG00000005740) #10	SALL1 (ENSSMRG00000005776) #11	TOX3 (ENSSMRG00000005925) #12	CHD9 (ENSSMRG00000005943) #15	RBL2 (ENSSMRG00000005954) #16	AKTIP (ENSSMRG00000005962) #17	RPGRIP1L (ENSSMRG00000005963) #18	FTO (ENSSMRG00000006034) #19	IRX3 (ENSSMRG00000006062) #21	IRX5 (ENSSMRG00000006134) #22	IRX6 (ENSSMRG00000006144) #23	ENSSMRG00000006173	MMP2 (ENSSMRG00000006186) #24	LPCAT2 (ENSSMRG00000006198) #25	CAPNS2 (ENSSMRG00000006204)	SLC6A2 (ENSSMRG00000006212) #26	SDR42E1 (ENSSMRG00000006244)	HSD17B2 (ENSSMRG00000006251)	ENSSMRG00000006414	ENSSMRG00000006423	MPHOSPH6 (ENSSMRG00000006427)	CDH13 (ENSSMRG00000006433)	MLYCD (ENSSMRG00000006437)	ENSSMRG00000006441	KCNG4 (ENSSMRG00000006447)
Toxicofera	ANCESTRAL SPECIES	16	ENSGT00390000012529	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a #25	ENSGT00940000158960 #26	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b.ab	ENSGT00390000012054.b.`b	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410	ENSGT00390000006293	ENSGT00940000156938	ENSGT00390000014299	ENSGT00940000160275
Elapidae	ANCESTRAL SPECIES	17	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00960000189988	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a #25	ENSGT00940000156844.a	ENSGT00940000155478	ENSGT00950000182843.a.a.a.b.a.b	ENSGT00640000091563.b	ENSGT00940000158960 #26	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b.ab	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410	ENSGT00390000006293.sd
Indian cobra	MODERN SPECIES	12	HEATR3 (ENSNNAG00000012932)	TENT4B (ENSNNAG00000012985)	ADCY7 (ENSNNAG00000013071)	BRD7 (ENSNNAG00000013586)	NKD1 (ENSNNAG00000013679) #7	SNX20 (ENSNNAG00000013703) #8	CYLD (ENSNNAG00000013712) #10	SALL1 (ENSNNAG00000013749) #11	ENSNNAG00000013764	CHD9 (ENSNNAG00000014441) #15	RBL2 (ENSNNAG00000018431) #16	AKTIP (ENSNNAG00000018435) #17	ENSNNAG00000018440 #18	FTO (ENSNNAG00000018444) #19	IRX3 (ENSNNAG00000018445) #21	IRX5 (ENSNNAG00000018448) #22	MMP2 (ENSNNAG00000018451) #24	LPCAT2 (ENSNNAG00000018456) #25	ENSNNAG00000018460	SLC6A2 (ENSNNAG00000018463) #26	SDR42E1 (ENSNNAG00000018469)	HSD17B2 (ENSNNAG00000018483)	ENSNNAG00000018505	MPHOSPH6 (ENSNNAG00000018509)	CDH13 (ENSNNAG00000018524)	MLYCD (ENSNNAG00000018551)	ENSNNAG00000018554	KCNG4 (ENSNNAG00000018562)	WFDC1 (ENSNNAG00000018573)	COTL1 (ENSNNAG00000018579)	USP10 (ENSNNAG00000018586)
Elapidae_a	ANCESTRAL SPECIES	28	ENSGT00390000012529	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00960000189988	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a #25	ENSGT00940000156844.a	ENSGT00940000155478	ENSGT00950000182843.a.a.a.b.a.b	ENSGT00940000158960 #26	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b.ab	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410	ENSGT00390000006293.sd	ENSGT00940000156938
Blue-lipped sea krait	MODERN SPECIES	4682																IRX5 (ENSLLTG00000008913) #22
Acanthophiinae	ANCESTRAL SPECIES	26	ENSGT00390000012529	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00960000189988	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a #25	ENSGT00940000155478	ENSGT00940000158960 #26	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b.ab	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410	ENSGT00390000006293.sd	ENSGT00940000156938	ENSGT00390000014299	ENSGT00940000160275
Mainland tiger snake	MODERN SPECIES	2213																ENSNSUG00000002344 #22
Eastern brown snake	MODERN SPECIES	65	TENT4B (ENSPTXG00000009072)	ADCY7 (ENSPTXG00000009074)	BRD7 (ENSPTXG00000009078)	NKD1 (ENSPTXG00000009220) #7	SNX20 (ENSPTXG00000009222) #8	CYLD (ENSPTXG00000009236) #10	ENSPTXG00000009237	SALL1 (ENSPTXG00000009238) #11	TOX3 (ENSPTXG00000009239) #12	ENSPTXG00000009240	CHD9 (ENSPTXG00000009241) #15	RBL2 (ENSPTXG00000009245) #16	AKTIP (ENSPTXG00000009542) #17	RPGRIP1L (ENSPTXG00000009543) #18	FTO (ENSPTXG00000009544) #19	IRX5 (ENSPTXG00000009546) #22	ENSPTXG00000009547 #23	MMP2 (ENSPTXG00000009548) #24	LPCAT2 (ENSPTXG00000009556) #25	ENSPTXG00000009559	SLC6A2 (ENSPTXG00000009562) #26	SDR42E1 (ENSPTXG00000009777)	HSD17B2 (ENSPTXG00000009778)	ENSPTXG00000009807	MPHOSPH6 (ENSPTXG00000009808)	CDH13 (ENSPTXG00000009809)	MLYCD (ENSPTXG00000009810)	HSBP1 (ENSPTXG00000009811)	KCNG4 (ENSPTXG00000009812)	WFDC1 (ENSPTXG00000009813)	ATP2C2 (ENSPTXG00000009818)
Archelosauria	ANCESTRAL SPECIES	16	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT01040000241257	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT01030000235305	ENSGT00950000182841.a	ENSGT00940000157672	ENSGT01030000235333	ENSGT00940000160211	ENSGT01050000244841.A.b.a.b.a.b	ENSGT00940000161738	ENSGT00550000075019	ENSGT00940000156131.a.b	ENSGT00940000157187
Cryptodira	ANCESTRAL SPECIES	14	ENSGT00390000012529	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00950000182841.a.y	ENSGT00940000157672	ENSGT01030000235333	ENSGT00940000160211	ENSGT01050000244841.A.b.a.b.a.b	ENSGT00940000161738	ENSGT00550000075019	ENSGT00940000156131.a.b	ENSGT00940000157187	ENSGT00950000182966.B
Testudinoidea	ANCESTRAL SPECIES	13	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT01000000220330	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00950000182841.a.y.a.a.a.a.a.a	ENSGT00950000182841.a.y.a.a.a.a.b	ENSGT00950000182841.a.y.a.a.a.b	ENSGT00950000182841.a.y.a.b.a	ENSGT00950000182841.a.y.b	ENSGT00950000182841.a.y.a.b.b	ENSGT01030000235305.c	ENSGT00950000182841.a.y.a.a.a.a.a.b	ENSGT00950000182841.a.y.a.a.b	ENSGT00940000157672
Emydidae	ANCESTRAL SPECIES	33	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT01000000220330	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT00940000166682	ENSGT01030000234574.A.b.a #25	ENSGT00940000158960 #26	ENSGT00950000182841.a.y.a.a.a.a.a.a	ENSGT00950000182841.a.y.a.a.a.a.b	ENSGT00950000182841.a.y.a.a.a.b	ENSGT00950000182841.a.y.a.b.a	ENSGT00950000182841.a.y.b	ENSGT00950000182841.a.y.a.b.b	ENSGT01030000235305.c	ENSGT00950000182841.a.y.a.a.a.a.a.b	ENSGT00950000182841.a.y.a.a.b	ENSGT00940000157672
Three-toed box turtle	MODERN SPECIES	60	TENT4B (ENSTMTG00000022548)	ADCY7 (ENSTMTG00000022528)	BRD7 (ENSTMTG00000022489)	NKD1 (ENSTMTG00000022468) #7	SNX20 (ENSTMTG00000022462) #8	CYLD (ENSTMTG00000022457) #10	SALL1 (ENSTMTG00000022452) #11	TOX3 (ENSTMTG00000022443) #12	ENSTMTG00000022436	CHD9 (ENSTMTG00000015377) #15	RBL2 (ENSTMTG00000014398) #16	AKTIP (ENSTMTG00000014379) #17	RPGRIP1L (ENSTMTG00000002670) #18	FTO (ENSTMTG00000002656) #19	IRX3 (ENSTMTG00000002652) #21	IRX5 (ENSTMTG00000002648) #22	ENSTMTG00000002642 #23	MMP2 (ENSTMTG00000002636) #24	CAPNS2 (ENSTMTG00000002630)	LPCAT2 (ENSTMTG00000002617) #25	SLC6A2 (ENSTMTG00000002534) #26	ENSTMTG00000002486	ENSTMTG00000002469	ENSTMTG00000002468	ENSTMTG00000002461	ENSTMTG00000002457	ENSTMTG00000002442	ENSTMTG00000002434	ENSTMTG00000002430	ENSTMTG00000002419	ENSTMTG00000002402
painted turtle	MODERN SPECIES	4	TENT4B (ENSCPBG00000015960)	ADCY7 (ENSCPBG00000015953)	BRD7 (ENSCPBG00000015938)	NKD1 (ENSCPBG00000015936) #7	SNX20 (ENSCPBG00000015934) #8	CYLD (ENSCPBG00000015931) #10	SALL1 (ENSCPBG00000015924) #11	TOX3 (ENSCPBG00000015917) #12	CHD9 (ENSCPBG00000012459) #15	RBL2 (ENSCPBG00000012231) #16	AKTIP (ENSCPBG00000012207) #17	RPGRIP1L (ENSCPBG00000012201) #18	FTO (ENSCPBG00000012192) #19	IRX3 (ENSCPBG00000012189) #21	ENSCPBG00000012177	IRX5 (ENSCPBG00000012173) #22	IRX6 (ENSCPBG00000012167) #23	MMP2 (ENSCPBG00000012165) #24	ENSCPBG00000012164	CAPNS2 (ENSCPBG00000012162)	LPCAT2 (ENSCPBG00000012158) #25	SLC6A2 (ENSCPBG00000012155) #26	ENSCPBG00000012150	ENSCPBG00000012146	ENSCPBG00000012143	ENSCPBG00000012140	ENSCPBG00000012136	ENSCPBG00000012135	ENSCPBG00000012134	ENSCPBG00000012133	ENSCPBG00000012131
Testudinidae	ANCESTRAL SPECIES	17	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT01000000220330	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00950000182841.a.y.a.a.a.a.a.a	ENSGT01030000235305.c	ENSGT00950000182841.a.y.a.a.a.a.b	ENSGT00950000182841.a.y.a.a.a.b	ENSGT00950000182841.a.y.a.b.a	ENSGT00950000182841.a.y.b	ENSGT00950000182841.a.y.a.b.b	ENSGT00950000182841.a.y.a.a.a.a.a.b	ENSGT01030000235305.d	ENSGT00950000182841.a.y.a.a.b
Abingdon island giant tortoise	MODERN SPECIES	315																IRX5 (ENSCABG00000015782) #22	IRX6 (ENSCABG00000015784) #23	MMP2 (ENSCABG00000015788) #24	LPCAT2 (ENSCABG00000015798) #25	CAPNS2 (ENSCABG00000015803)	SLC6A2 (ENSCABG00000015821) #26	ENSCABG00000015856	ENSCABG00000015863	ENSCABG00000015866	ENSCABG00000015874	ENSCABG00000015944	ENSCABG00000015994	ENSCABG00000016001	ENSCABG00000016002	ENSCABG00000016003	ENSCABG00000016004
Goode s thornscrub tortoise	MODERN SPECIES	3	ADCY7 (ENSGEVG00005014804)	BRD7 (ENSGEVG00005014130)	NKD1 (ENSGEVG00005013964) #7	SNX20 (ENSGEVG00005013947) #8	CYLD (ENSGEVG00005013915) #10	SALL1 (ENSGEVG00005013862) #11	ENSGEVG00005013844	TOX3 (ENSGEVG00005013709) #12	ENSGEVG00005013688	CHD9 (ENSGEVG00005013539) #15	RBL2 (ENSGEVG00005013409) #16	AKTIP (ENSGEVG00005013365) #17	RPGRIP1L (ENSGEVG00005013217) #18	FTO (ENSGEVG00005013146) #19	IRX3 (ENSGEVG00005012997) #21	IRX5 (ENSGEVG00005012952) #22	ENSGEVG00005012896 #23	MMP2 (ENSGEVG00005012646) #24	CAPNS2 (ENSGEVG00005012569)	LPCAT2 (ENSGEVG00005012528) #25	SLC6A2 (ENSGEVG00005012091) #26	ENSGEVG00005011985	ENSGEVG00005011945	ENSGEVG00005011905	ENSGEVG00005011853	ENSGEVG00005011644	ENSGEVG00005011253	ENSGEVG00005011149	ENSGEVG00005011106	ENSGEVG00005011068	SLC12A4 (ENSGEVG00005010974)
Chinese turtle	MODERN SPECIES	940	ENSPSIG00000010651	BRD7 (ENSPSIG00000010123)	NKD1 (ENSPSIG00000009112) #7	SNX20 (ENSPSIG00000009076) #8	CYLD (ENSPSIG00000008623) #10	SALL1 (ENSPSIG00000008582) #11	ENSPSIG00000001632	TOX3 (ENSPSIG00000008201) #12	CHD9 (ENSPSIG00000008099) #15	RBL2 (ENSPSIG00000007573) #16	AKTIP (ENSPSIG00000007566) #17	RPGRIP1L (ENSPSIG00000007549) #18	FTO (ENSPSIG00000007424) #19	ENSPSIG00000001627	IRX3 (ENSPSIG00000006981) #21	IRX5 (ENSPSIG00000006956) #22	IRX6 (ENSPSIG00000006856) #23	MMP2 (ENSPSIG00000017859) #24	LPCAT2 (ENSPSIG00000017713) #25	SLC6A2 (ENSPSIG00000016841) #26	ENSPSIG00000001625	ENSPSIG00000016838	SLC12A4 (ENSPSIG00000016735)	ENSPSIG00000016600
Archosauria	ANCESTRAL SPECIES	14	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT01040000241257	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00950000182841.a	ENSGT00940000157672	ENSGT01030000235333	ENSGT00940000160211	ENSGT01050000244841.A.b.a.b.a.b	ENSGT00940000161738	ENSGT00550000075019	ENSGT00940000156131.a.b	ENSGT00940000157187	ENSGT00950000182966.B
Australian saltwater crocodile	MODERN SPECIES	35	ADCY7 (ENSCPRG00005003595)	BRD7 (ENSCPRG00005003570)	NKD1 (ENSCPRG00005003548) #7	SNX20 (ENSCPRG00005003533) #8	CYLD (ENSCPRG00005003515) #10	ENSCPRG00005003506 #11	ENSCPRG00005003503 #11	TOX3 (ENSCPRG00005003482) #12	ENSCPRG00005003475	CHD9 (ENSCPRG00005003455) #15	RBL2 (ENSCPRG00005003449) #16	AKTIP (ENSCPRG00005003438) #17	RPGRIP1L (ENSCPRG00005003426) #18	FTO (ENSCPRG00005003411) #19	IRX3 (ENSCPRG00005003402) #21	ENSCPRG00005003389 #22	IRX6 (ENSCPRG00005003377) #23	MMP2 (ENSCPRG00005003118) #24	LPCAT2 (ENSCPRG00005003047) #25	SLC6A2 (ENSCPRG00005002972) #26	ENSCPRG00005002923	SLC12A4 (ENSCPRG00005002899)	DPEP2 (ENSCPRG00005002892)	ENSCPRG00005002872	ENSCPRG00005002869	DDX28 (ENSCPRG00005002813)	DUS2 (ENSCPRG00005002801)	NFATC3 (ENSCPRG00005002786)	ESRP2 (ENSCPRG00005002771)	OSGIN1 (ENSCPRG00005002766)	NECAB2 (ENSCPRG00005002717)
Aves	ANCESTRAL SPECIES	22	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT01040000241257	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT00940000155478	ENSGT01030000234574.A.b.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000157672	ENSGT01030000235333	ENSGT00940000160211	ENSGT01050000244841.A.b.a.b.a.b	ENSGT00940000161738	ENSGT00550000075019	ENSGT00940000156131.a.b	ENSGT00940000157187	ENSGT00950000182966.B
Neognathae	ANCESTRAL SPECIES	13	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT01040000241257	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT00940000155478	ENSGT01030000234574.A.b.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000157672	ENSGT01030000235333	ENSGT00940000160211	ENSGT01050000244841.A.b.a.b.a.b	ENSGT00940000161738	ENSGT00550000075019	ENSGT00940000156131.a.b	ENSGT00940000157187	ENSGT00950000182966.B
Neognathae_b	DUPLICATION
Neognathae_b	ANCESTRAL SPECIES																	ENSGT00940000159483.c #22
Passeriformes	ANCESTRAL SPECIES																	ENSGT00940000159483.c #22
Passeriformes_d	ANCESTRAL SPECIES																	ENSGT00940000159483.c #22
Flycatcher	MODERN SPECIES	2	ENSFALG00000026934	CBLN1 (ENSFALG00000000098)	ZNF423 (ENSFALG00000000097)	CNEP1R1 (ENSFALG00000025598)	HEATR3 (ENSFALG00000000089)	TENT4B (ENSFALG00000000087)	ADCY7 (ENSFALG00000000086)	BRD7 (ENSFALG00000000080)	ENSFALG00000027589	NKD1 (ENSFALG00000000078) #7	SNX20 (ENSFALG00000000077) #8	CYLD (ENSFALG00000000075) #10	SALL1 (ENSFALG00000000074) #11	TOX3 (ENSFALG00000000072) #12	FTO (ENSFALG00000007914) #19	ENSFALG00000028077 #22	ENSFALG00000026677 #23	MMP2 (ENSFALG00000007900) #24	LPCAT2 (ENSFALG00000007864) #25	ENSFALG00000028070	SLC6A2 (ENSFALG00000007795) #26	SLC12A4 (ENSFALG00000007770)	DPEP2 (ENSFALG00000007766)	ENSFALG00000007762	ENSFALG00000014595	DUS2 (ENSFALG00000007759)	ENSFALG00000026060	ENSFALG00000007757	ESRP2 (ENSFALG00000007753)	ENSFALG00000014575	PLA2G15 (ENSFALG00000028472)
Neognathae_b	DUPLICATION
Neognathae_b	ANCESTRAL SPECIES	15	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00960000190127	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT01040000241257	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B.f #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483.d.a #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT00940000155478	ENSGT01030000234574.A.b.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000157672	ENSGT00940000160211	ENSGT01050000244841.A.b.a.b.a.b	ENSGT00940000161738	ENSGT00550000075019	ENSGT00940000156131.a.b	ENSGT00940000157187	ENSGT00950000182966.B	ENSGT00940000157499
Passeriformes	ANCESTRAL SPECIES	13	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00960000190127	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT01040000241257	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B.e #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483.d.a #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT00940000155478	ENSGT01030000234574.A.b.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000157672	ENSGT00940000160211	ENSGT01050000244841.A.b.a.b.a.b	ENSGT00940000161738	ENSGT00550000075019	ENSGT00940000156131.a.b	ENSGT00940000157187	ENSGT00950000182966.B	ENSGT00940000157499
Passeriformes_d	ANCESTRAL SPECIES	13	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00960000190127	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043.a #12	ENSGT00940000155706 #15	ENSGT01040000241257	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483.d.a #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000157672	ENSGT00940000160211	ENSGT01050000244841.A.b.a.b.a.b	ENSGT00940000161738	ENSGT00550000075019	ENSGT00940000156131.a.b	ENSGT00940000157187	ENSGT00950000182966.B	ENSGT00940000157499	ENSGT00400000022168.b
Passeriformes_g	ANCESTRAL SPECIES	17	ENSGT00390000012529	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00960000190127	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043.a #12	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483.d.a #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000157672	ENSGT00940000160211	ENSGT01050000244841.A.b.a.b.a.b	ENSGT00940000161738	ENSGT00550000075019	ENSGT00940000156131.a.b	ENSGT00940000157187	ENSGT00950000182966.B	ENSGT00940000157499	ENSGT00400000022168.b
Passeroidea	ANCESTRAL SPECIES	17	ENSGT00390000012529	ENSGT00390000008576	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043.a #12	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483.d.a #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a #25	ENSGT00940000166682	ENSGT00940000158960 #26	ENSGT00940000157672	ENSGT00940000160211	ENSGT01050000244841.A.b.a.b.a.b	ENSGT00940000161738	ENSGT00550000075019	ENSGT00940000156131.a.b	ENSGT00940000157187	ENSGT00950000182966.B	ENSGT00940000157499	ENSGT00400000022168.b
Zebra finch	MODERN SPECIES	2							ENSTGUG00000022644	SALL1 (ENSTGUG00000007514) #11	ENSTGUG00000007508 #12	CHD9 (ENSTGUG00000007476) #15	RBL2 (ENSTGUG00000007426) #16	AKTIP (ENSTGUG00000007406) #17	ENSTGUG00000027769	FTO (ENSTGUG00000007401) #19	IRX3 (ENSTGUG00000028899) #21	IRX5 (ENSTGUG00000026210) #22	IRX6 (ENSTGUG00000020135) #23	MMP2 (ENSTGUG00000007337) #24	LPCAT2 (ENSTGUG00000007314) #25	SLC6A2 (ENSTGUG00000007218) #26	SLC12A4 (ENSTGUG00000007074)	ENSTGUG00000027159	ENSTGUG00000007047	DDX28 (ENSTGUG00000007045)	DUS2 (ENSTGUG00000007016)	NFATC3 (ENSTGUG00000007006)	ESRP2 (ENSTGUG00000006986)	PLA2G15 (ENSTGUG00000025455)	SMPD3 (ENSTGUG00000006964)	PRMT7 (ENSTGUG00000006916)	SLC7A6OS (ENSTGUG00000006907)
Great tit	MODERN SPECIES	2	HEATR3 (ENSPMJG00000002534)	TENT4B (ENSPMJG00000002519)	ADCY7 (ENSPMJG00000002418)	BRD7 (ENSPMJG00000002349)	ENSPMJG00000002341	NKD1 (ENSPMJG00000002321) #7	SNX20 (ENSPMJG00000002269) #8	CYLD (ENSPMJG00000002241) #10	SALL1 (ENSPMJG00000002204) #11	TOX3 (ENSPMJG00000002068) #12	CHD9 (ENSPMJG00000001906) #15	RBL2 (ENSPMJG00000001882) #16	AKTIP (ENSPMJG00000001877) #17	ENSPMJG00000001857 #18	FTO (ENSPMJG00000001806) #19	IRX5 (ENSPMJG00000001724) #22	IRX6 (ENSPMJG00000001698) #23	MMP2 (ENSPMJG00000001696) #24	ENSPMJG00000001678	LPCAT2 (ENSPMJG00000001668) #25	SLC6A2 (ENSPMJG00000001646) #26	SLC12A4 (ENSPMJG00000001616)	DPEP2 (ENSPMJG00000001604)	ENSPMJG00000001595	DDX28 (ENSPMJG00000001387)	DUS2 (ENSPMJG00000001368)	NFATC3 (ENSPMJG00000001292)	ESRP2 (ENSPMJG00000001252)	ENSPMJG00000001244	PLA2G15 (ENSPMJG00000001230)	SMPD3 (ENSPMJG00000001203)
Neognathae_c	ANCESTRAL SPECIES	18	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00960000190127	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B.f #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483.d.a #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a #25	ENSGT00940000158960 #26	ENSGT00940000157672	ENSGT00940000160211	ENSGT01050000244841.A.b.a.b.a.b	ENSGT00940000161738	ENSGT00550000075019	ENSGT00940000156131.a.b	ENSGT00940000157187	ENSGT00950000182966.B	ENSGT00940000157499	ENSGT00400000022168.b	ENSGT00940000156879
Kakapo	MODERN SPECIES	19	ENSSHBG00005001960	ADCY7 (ENSSHBG00005001991)	BRD7 (ENSSHBG00005002033)	ENSSHBG00005002050	ENSSHBG00005002133 #7	ENSSHBG00005002150 #8	CYLD (ENSSHBG00005002168) #10	ENSSHBG00005002192 #11	ENSSHBG00005002199 #12	ENSSHBG00005002921 #15	ENSSHBG00005004768 #16	ENSSHBG00005004785 #17	RPGRIP1L (ENSSHBG00005004805) #18	FTO (ENSSHBG00005004822) #19	ENSSHBG00005004846 #21	ENSSHBG00005004850 #22	ENSSHBG00005004859 #23	ENSSHBG00005004868 #24	LPCAT2 (ENSSHBG00005004875) #25	SLC6A2 (ENSSHBG00005004882) #26	ENSSHBG00005004890	ENSSHBG00005004922	ENSSHBG00005004983	DDX28 (ENSSHBG00005004999)	ENSSHBG00005005052	ENSSHBG00005005061	ENSSHBG00005005094	ENSSHBG00005005102	PLA2G15 (ENSSHBG00005005108)	ENSSHBG00005005114	ENSSHBG00005005124
Golden eagle	MODERN SPECIES	25	HEATR3 (ENSACCG00020002623)	TENT4B (ENSACCG00020002781)	ADCY7 (ENSACCG00020002875)	BRD7 (ENSACCG00020002949)	NKD1 (ENSACCG00020002998) #7	SNX20 (ENSACCG00020003015) #8	CYLD (ENSACCG00020003038) #10	SALL1 (ENSACCG00020003074) #11	TOX3 (ENSACCG00020003095) #12	CHD9 (ENSACCG00020003121) #15	RBL2 (ENSACCG00020003164) #16	AKTIP (ENSACCG00020003199) #17	RPGRIP1L (ENSACCG00020003265) #18	FTO (ENSACCG00020003336) #19	IRX3 (ENSACCG00020003366) #21	IRX5 (ENSACCG00020003380) #22	ENSACCG00020003392 #23	MMP2 (ENSACCG00020000389) #24	LPCAT2 (ENSACCG00020000417) #25	SLC6A2 (ENSACCG00020000586) #26	SLC12A4 (ENSACCG00020000700)	ENSACCG00020000779	ENSACCG00020000798	DDX28 (ENSACCG00020000925)	DUS2 (ENSACCG00020000994)	NFATC3 (ENSACCG00020001024)	ESRP2 (ENSACCG00020001045)	ENSACCG00020001066	PLA2G15 (ENSACCG00020001081)	SMPD3 (ENSACCG00020001103)	PRMT7 (ENSACCG00020001130)
Neognathae_b	ANCESTRAL SPECIES																	ENSGT00940000159483.d.b #22
Neognathae_c	ANCESTRAL SPECIES																	ENSGT00940000159483.d.b #22
Kakapo	MODERN SPECIES	4	ENSSHBG00005000998	ENSSHBG00005000996	ENSSHBG00005000994	ENSSHBG00005000993	ENSSHBG00005000991	ENSSHBG00005000988	ENSSHBG00005000979	ENSSHBG00005000968	ENSSHBG00005000550	ENSSHBG00005000536	ENSSHBG00005000511	ENSSHBG00005000507	ENSSHBG00005000502 #24	ENSSHBG00005000497 #23	ENSSHBG00005000486	ENSSHBG00005000481 #22	ENSSHBG00005000475 #21	ENSSHBG00005000470	ENSSHBG00005000468 #17	TAT (ENSSHBG00005000464)	ENSSHBG00005000462	ENSSHBG00005000457	ENSSHBG00005000452	ENSSHBG00005000450	ENSSHBG00005000447	ENSSHBG00005000446	ENSSHBG00005000445	ENSSHBG00005000443	ENSSHBG00005000441	ENSSHBG00005000439	ENSSHBG00005000428
Galloanserae	ANCESTRAL SPECIES	12	ENSGT00390000012529	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT00940000166682	ENSGT01030000234574.A.b.a #25	ENSGT00940000158960 #26	ENSGT00940000157672	ENSGT01030000235333	ENSGT00940000160211	ENSGT01050000244841.A.b.a.b.a.b	ENSGT00940000161738	ENSGT00550000075019	ENSGT00940000156131.a.b	ENSGT00940000157187	ENSGT00950000182966.B	ENSGT00940000157499
Anatidae	ANCESTRAL SPECIES	17	ENSGT00390000012529	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706 #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT00940000166682	ENSGT01030000234574.A.b.a #25	ENSGT00940000158960 #26	ENSGT00940000157672	ENSGT01030000235333	ENSGT00940000160211	ENSGT01050000244841.A.b.a.b.a.b	ENSGT00940000161738	ENSGT00550000075019	ENSGT00940000156131.a.b	ENSGT00940000157187	ENSGT00950000182966.B	ENSGT00940000157499
Pink-footed goose	MODERN SPECIES	15								SALL1 (ENSABRG00000020030) #11	TOX3 (ENSABRG00000020053) #12	CHD9 (ENSABRG00000020362) #15	RBL2 (ENSABRG00000021843) #16	AKTIP (ENSABRG00000021982) #17	RPGRIP1L (ENSABRG00000022027) #18	FTO (ENSABRG00000022047) #19	IRX3 (ENSABRG00000022069) #21	IRX5 (ENSABRG00000022092) #22	IRX6 (ENSABRG00000022116) #23	MMP2 (ENSABRG00000022132) #24	LPCAT2 (ENSABRG00000022184) #25	SLC6A2 (ENSABRG00000022187) #26	SLC12A4 (ENSABRG00000022298)	ENSABRG00000022665	ENSABRG00000022667	DDX28 (ENSABRG00000022669)	DUS2 (ENSABRG00000022711)	NFATC3 (ENSABRG00000022750)	ESRP2 (ENSABRG00000022757)	ENSABRG00000022767	PLA2G15 (ENSABRG00000022768)	SMPD3 (ENSABRG00000022770)	PRMT7 (ENSABRG00000022774)
Duck	MODERN SPECIES	629																IRX5 (ENSAPLG00000026714) #22
Phasianidae	ANCESTRAL SPECIES	12	ENSGT00390000012529	ENSGT00940000158301	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706.x #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT00940000166682	ENSGT01030000234574.A.b.a #25	ENSGT00940000158960 #26	ENSGT00940000157672	ENSGT00940000160211	ENSGT01050000244841.A.b.a.b.a.b	ENSGT00940000161738	ENSGT00550000075019	ENSGT00940000156131.a.b	ENSGT00940000157187	ENSGT00950000182966.B	ENSGT00940000157499	ENSGT00400000022168.b
Phasianidae_b	ANCESTRAL SPECIES	14	ENSGT00390000012529	ENSGT00940000158301.c	ENSGT00940000159096	ENSGT00950000183170.a	ENSGT00440000033589.c #7	ENSGT00530000063759.a #8	ENSGT00390000018123.a.a #10	ENSGT00940000155938 #11	ENSGT00940000158043 #12	ENSGT00940000155706.x #15	ENSGT00950000183202.a.b #16	ENSGT00390000010125 #17	ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a #25	ENSGT00940000158960 #26	ENSGT00940000157672	ENSGT00940000160211	ENSGT00940000161738	ENSGT00550000075019	ENSGT00940000156131.a.b	ENSGT00940000157187	ENSGT00950000183131.b.b	ENSGT00940000157764	ENSGT00490000043404	ENSGT00940000160053	ENSGT00940000158494
Chicken	MODERN SPECIES	2	HEATR3 (ENSGALG00010025910)	PAPD5 (ENSGALG00010024080)	ADCY7 (ENSGALG00010024074)	BRD7 (ENSGALG00010024063)	NKD1 (ENSGALG00010024038) #7	SNX20 (ENSGALG00010022754) #8	CYLD (ENSGALG00010022737) #10	SALL1 (ENSGALG00010022707) #11	TOX3 (ENSGALG00010024523) #12	CHD9 (ENSGALG00010021789) #15	RBL2 (ENSGALG00010021778) #16	AKTIP (ENSGALG00010021747) #17	RPGRIP1L (ENSGALG00010021298) #18	FTO (ENSGALG00010021200) #19	IRX3 (ENSGALG00010025432) #21	IRX5 (ENSGALG00010025430) #22	IRX6 (ENSGALG00010025424) #23	MMP2 (ENSGALG00010025414) #24	LPCAT2 (ENSGALG00010025257) #25	SLC6A2 (ENSGALG00010025392) #26	ENSGALG00010025372	SLC12A4 (ENSGALG00010025353)	DPEP2 (ENSGALG00010025325)	GALR1L (ENSGALG00010025309)	DDX28 (ENSGALG00010025304)	DUS2 (ENSGALG00010025291)	NFATC3 (ENSGALG00010021335)	ESRP2 (ENSGALG00010021228)	ENSGALG00010024764	OSGIN1 (ENSGALG00010024761)	SLC38A8 (ENSGALG00010024740)
Japanese quail	MODERN SPECIES	2	HEATR3 (ENSCJPG00005014356)	TENT4B (ENSCJPG00005014355)	ADCY7 (ENSCJPG00005014354)	BRD7 (ENSCJPG00005014353)	NKD1 (ENSCJPG00005014352) #7	SNX20 (ENSCJPG00005014349) #8	CYLD (ENSCJPG00005014348) #10	SALL1 (ENSCJPG00005014342) #11	TOX3 (ENSCJPG00005014332) #12	CHD9 (ENSCJPG00005012416) #15	RBL2 (ENSCJPG00005012415) #16	AKTIP (ENSCJPG00005012414) #17	RPGRIP1L (ENSCJPG00005012413) #18	FTO (ENSCJPG00005012412) #19	IRX3 (ENSCJPG00005012408) #21	IRX5 (ENSCJPG00005012400) #22	IRX6 (ENSCJPG00005012397) #23	MMP2 (ENSCJPG00005012395) #24	CAPNS2 (ENSCJPG00005012394)	LPCAT2 (ENSCJPG00005012393) #25	SLC6A2 (ENSCJPG00005012392) #26	SLC12A4 (ENSCJPG00005012391)	DPEP2 (ENSCJPG00005012390)	ENSCJPG00005012389	DDX28 (ENSCJPG00005012388)	DUS2 (ENSCJPG00005012387)	NFATC3 (ENSCJPG00005012386)	ESRP2 (ENSCJPG00005012385)	ENSCJPG00005012384	PLA2G15 (ENSCJPG00005012383)	SMPD3 (ENSCJPG00005012382)
Anura	ANCESTRAL SPECIES	250													ENSGT00520000055620.B #18	ENSGT00390000017730 #19	ENSGT00940000161299 #21	ENSGT00940000159483 #22	ENSGT00940000159909 #23	ENSGT00940000158511 #24	ENSGT01030000234574.A.b.a #25	ENSGT00940000158960 #26	ENSGT00940000157672	ENSGT00940000160211	ENSGT00550000075019
Frog	MODERN SPECIES	4	ripor1 (ENSXETG00000015614)	ctcf (ENSXETG00000015615)	CARMIL2 (ENSXETG00000044007)	enkd1 (ENSXETG00000015620)	gfod2 (ENSXETG00000015621)	nutf2 (ENSXETG00000026897)	thap11 (ENSXETG00000005807)	edc4 (ENSXETG00000005809)	nrn1l (ENSXETG00000045146)	pla2g15 (ENSXETG00000005810)	nfatc3 (ENSXETG00000005812)	rpgrip1l (ENSXETG00000033904) #18	ENSXETG00000044953	fto (ENSXETG00000005816) #19	irx3 (ENSXETG00000005818) #21	irx5 (ENSXETG00000002816) #22	IRX6 (ENSXETG00000036488) #23	mmp2 (ENSXETG00000002801) #24	ENSXETG00000035579	lpcat2 (ENSXETG00000002794) #25	ENSXETG00000042596	slc6a2 (ENSXETG00000002785) #26	slc12a4 (ENSXETG00000005430)	ENSXETG00000043530	ENSXETG00000048349	dpep2 (ENSXETG00000005433)	ENSXETG00000046421	ENSXETG00000047425	dus2 (ENSXETG00000005436)	pskh1 (ENSXETG00000018464)	ENSXETG00000034999
Leishan spiny toad	MODERN SPECIES	1	ENSLLEG00000013285	ENSLLEG00000013333	ENSLLEG00000013384	ALKBH3 (ENSLLEG00000013419)	HSD17B12 (ENSLLEG00000013468)	TTC17 (ENSLLEG00000013634)	API5 (ENSLLEG00000014134)	ENSLLEG00000014660	ENSLLEG00000014703	ENSLLEG00000014774	ENSLLEG00000014880	ENSLLEG00000014993	ENSLLEG00000015031	ENSLLEG00000015058	ENSLLEG00000015082	IRX5 (ENSLLEG00000015128) #22	ENSLLEG00000015164	ENSLLEG00000015210	IRX3 (ENSLLEG00000015243) #21	ENSLLEG00000015315	FTO (ENSLLEG00000015342) #19	RPGRIP1L (ENSLLEG00000015460) #18	ENSLLEG00000015789	ENSLLEG00000015837	ENSLLEG00000015851	ENSLLEG00000015873	ENSLLEG00000015895	ENSLLEG00000015916	ENSLLEG00000015932	ENSLLEG00000015948	ENSLLEG00000015964