Rodentia	ANCESTRAL SPECIES	21	ENSGT00390000004380 #7	ENSGT00940000158238 #8	ENSGT00530000063668.B #9	ENSGT00510000049722 #10	ENSGT00940000161961 #11	ENSGT00940000158614 #12	ENSGT00940000158299 #13	ENSGT00940000157269.a.a #14	ENSGT00940000160868 #15	ENSGT01030000234597.a.b.a #16	ENSGT00940000159105 #17	ENSGT01030000234527.A.a.b.a.a #18	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b #20	ENSGT00950000182864.a.b.a #21	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #28	ENSGT00940000161685.A.a #27	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930 #34	ENSGT00940000158607 #35	ENSGT00940000172945	ENSGT01100000263540.B.d
Rodentia_B	ANCESTRAL SPECIES	24	ENSGT00390000004380 #7	ENSGT00940000158238 #8	ENSGT00530000063668.B #9	ENSGT00510000049722 #10	ENSGT00940000161961 #11	ENSGT00940000158614 #12	ENSGT00940000158299 #13	ENSGT00940000157269.a.a #14	ENSGT00940000160868 #15	ENSGT01030000234597.a.b.a #16	ENSGT00940000159105 #17	ENSGT01030000234527.A.a.b.a.a #18	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b.p #20	ENSGT00950000182864.a.b.a #21	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #28	ENSGT00940000161685.A.a #27	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930 #34	ENSGT00940000158607 #35	ENSGT01100000263540.B.d	ENSGT00940000155874
Myomorpha	ANCESTRAL SPECIES	29	ENSGT00390000004380 #7	ENSGT00940000158238 #8	ENSGT00530000063668.B #9	ENSGT00510000049722 #10	ENSGT00940000161961 #11	ENSGT00940000158614 #12	ENSGT00940000158299 #13	ENSGT00940000157269.a.a #14	ENSGT00940000160868 #15	ENSGT01030000234597.a.b.a #16	ENSGT00940000159105 #17	ENSGT01030000234527.A.a.b.a.a #18	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b.p #20	ENSGT00950000182864.a.b.a #21	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #28	ENSGT00940000161685.A.a #27	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930 #34	ENSGT00940000158607 #35	ENSGT01100000263540.B.d	ENSGT00940000155874
Muroidea	ANCESTRAL SPECIES	26	ENSGT00390000004380 #7	ENSGT00940000158238 #8	ENSGT00530000063668.B #9	ENSGT00510000049722 #10	ENSGT00940000161961 #11	ENSGT00940000158614 #12	ENSGT00940000158299 #13	ENSGT00940000157269.a.a #14	ENSGT00940000160868 #15	ENSGT01030000234597.a.b.a #16	ENSGT00940000159105 #17	ENSGT01030000234527.A.a.b.a.a #18	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b.p #20	ENSGT00950000182864.a.b.a #21	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #28	ENSGT00940000161685.A.a #27	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930 #34	ENSGT00940000158607 #35	ENSGT01100000263540.B.d	ENSGT00940000155874
Muroidea_A	ANCESTRAL SPECIES	10	ENSGT00940000158238 #8	ENSGT00530000063668.B #9	ENSGT00510000049722 #10	ENSGT00940000161961 #11	ENSGT00940000158614 #12	ENSGT00940000158299 #13	ENSGT00940000157269.a.a #14	ENSGT00940000160868 #15	ENSGT01030000234597.a.b.a #16	ENSGT00940000159105 #17	ENSGT01030000234527.A.a.b.a.a #18	ENSGT00860000136257 #19	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b.p #20	ENSGT00950000182864.a.b.a #21	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #28	ENSGT00940000161685.A.a #27	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930 #34	ENSGT00940000158607 #35	ENSGT00940000163436.n.a #37	ENSGT01100000263540.B.d
Murinae	ANCESTRAL SPECIES	16	ENSGT00940000158238 #8	ENSGT00530000063668.B #9	ENSGT00510000049722 #10	ENSGT00940000161961 #11	ENSGT00940000158614 #12	ENSGT00940000158299 #13	ENSGT00940000157269.a.a #14	ENSGT00940000160868 #15	ENSGT01030000234597.a.b.a #16	ENSGT00940000159105 #17	ENSGT01030000234527.A.a.b.a.a #18	ENSGT00860000136257 #19	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b.p #20	ENSGT00950000182864.a.b.a #21	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #28	ENSGT00940000161685.A.a #27	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930 #34	ENSGT00940000158607 #35	ENSGT00940000163436.n.a #37	ENSGT01100000263540.B.d
Mus	ANCESTRAL SPECIES	8	ENSGT00940000158238 #8	ENSGT00530000063668.B #9	ENSGT00510000049722 #10	ENSGT00940000161961 #11	ENSGT00940000158614 #12	ENSGT00940000158299 #13	ENSGT00940000157269.a.a #14	ENSGT00940000160868 #15	ENSGT01030000234597.a.b.a #16	ENSGT00940000159105 #17	ENSGT01030000234527.A.a.b.a.a #18	ENSGT00860000136257 #19	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b.p #20	ENSGT00950000182864.a.b.a #21	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #28	ENSGT00940000161685.A.a #27	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930 #34	ENSGT00940000158607 #35	ENSGT00940000163436.n.a #37	ENSGT01100000263540.B.d
Shrew mouse	MODERN SPECIES	21	Ccdc25 (MGP_PahariEiJ_G0030448) #7	Scara3 (MGP_PahariEiJ_G0030449) #8	Clu (MGP_PahariEiJ_G0030450) #9	Gulo (MGP_PahariEiJ_G0030451) #10	Adam2 (MGP_PahariEiJ_G0030452) #11	Ephx2 (MGP_PahariEiJ_G0030453) #12	Chrna2 (MGP_PahariEiJ_G0030454) #13	Ptk2b (MGP_PahariEiJ_G0030455) #14	Trim35 (MGP_PahariEiJ_G0030456) #15	Stmn4 (MGP_PahariEiJ_G0030457) #16	Adra1a (MGP_PahariEiJ_G0030458) #17	Dpysl2 (MGP_PahariEiJ_G0030459) #18	MGP_PahariEiJ_G0030460 #19	Bnip3l (MGP_PahariEiJ_G0030462) #20	Ppp2r2a (MGP_PahariEiJ_G0030463) #21	Ebf2 (MGP_PahariEiJ_G0030464) #22	Cdca2 (MGP_PahariEiJ_G0030465) #23	Kctd9 (MGP_PahariEiJ_G0030466) #24	Gnrh1 (MGP_PahariEiJ_G0030467) #25	Dock5 (MGP_PahariEiJ_G0030468) #26	Nefm (MGP_PahariEiJ_G0030469) #27	Nefl (MGP_PahariEiJ_G0030470) #28	Adam7 (MGP_PahariEiJ_G0030471) #29	Adamdec1 (MGP_PahariEiJ_G0030472) #30	Adam28 (MGP_PahariEiJ_G0030473) #31	Stc1 (MGP_PahariEiJ_G0030474) #32	MGP_PahariEiJ_G0030475 #33	Nkx3-1 (MGP_PahariEiJ_G0030476) #34	Slc25a37 (MGP_PahariEiJ_G0030477) #35	MGP_PahariEiJ_G0030478 #36	MGP_PahariEiJ_G0030479 #37
Mus_A	ANCESTRAL SPECIES	12	ENSGT00530000063668.B #9	ENSGT00510000049722 #10	ENSGT00940000161961 #11	ENSGT00940000158614 #12	ENSGT00940000158299 #13	ENSGT00940000157269.a.a #14	ENSGT00940000160868 #15	ENSGT01030000234597.a.b.a #16	ENSGT00940000159105 #17	ENSGT00860000136174	ENSGT01030000234527.A.a.b.a.a #18	ENSGT00860000136257 #19	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b.p #20	ENSGT00950000182864.a.b.a.y #21	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #28	ENSGT00940000161685.A.a #27	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930 #34	ENSGT00940000158607 #35	ENSGT00940000163436.n.a #37	ENSGT01100000263540.B.d
Mus_B	ANCESTRAL SPECIES	11	ENSGT00530000063668.B #9	ENSGT00510000049722 #10	ENSGT00940000161961 #11	ENSGT00940000158614 #12	ENSGT00940000158299 #13	ENSGT00940000157269.a.a #14	ENSGT00940000160868 #15	ENSGT01030000234597.a.b.a #16	ENSGT00940000159105 #17	ENSGT00860000136174	ENSGT01030000234527.A.a.b.a.a #18	ENSGT00860000136257 #19	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b.p #20	ENSGT00950000182864.a.b.a.y #21	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #28	ENSGT00940000161685.A.a #27	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930 #34	ENSGT00940000158607 #35	ENSGT00940000163436.n.a #37	ENSGT01100000263540.B.d
Mouse	MODERN SPECIES	5	Ccdc25 (ENSMUSG00000022035) #7	Scara3 (ENSMUSG00000034463) #8	Clu (ENSMUSG00000022037) #9	Gulo (ENSMUSG00000034450) #10	Adam2 (ENSMUSG00000022039) #11	Ephx2 (ENSMUSG00000022040) #12	Chrna2 (ENSMUSG00000022041) #13	Ptk2b (ENSMUSG00000059456) #14	Trim35 (ENSMUSG00000022043) #15	Stmn4 (ENSMUSG00000022044) #16	Adra1a (ENSMUSG00000045875) #17	Dpysl2 (ENSMUSG00000022048) #18	Pnma2 (ENSMUSG00000046204)	Bnip3l (ENSMUSG00000022051) #20	Ppp2r2a (ENSMUSG00000022052) #21	Ebf2 (ENSMUSG00000022053) #22	Cdca2 (ENSMUSG00000048922) #23	Kctd9 (ENSMUSG00000034327) #24	Gnrh1 (ENSMUSG00000015812) #25	Dock5 (ENSMUSG00000044447) #26	Nefm (ENSMUSG00000022054) #27	Nefl (ENSMUSG00000022055) #28	Adam7 (ENSMUSG00000022056) #29	Adamdec1 (ENSMUSG00000022057) #30	Adam28 (ENSMUSG00000014725) #31	Stc1 (ENSMUSG00000014813) #32	Nkx2-6 (ENSMUSG00000044186) #33	Nkx3-1 (ENSMUSG00000022061) #34	Slc25a37 (ENSMUSG00000034248) #35	Synb (ENSMUSG00000047977) #37	Entpd4 (ENSMUSG00000095463)
Mus_C	ANCESTRAL SPECIES	20	ENSGT00530000063668.B #9	ENSGT00510000049722 #10	ENSGT00940000161961 #11	ENSGT00940000158614 #12	ENSGT00940000158299 #13	ENSGT00940000157269.a.a #14	ENSGT00940000160868 #15	ENSGT01030000234597.a.b.a #16	ENSGT00940000159105 #17	ENSGT00860000136174	ENSGT01030000234527.A.a.b.a.a #18	ENSGT00860000136257 #19	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b.p #20	ENSGT00950000182864.a.b.a.y #21	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #28	ENSGT00940000161685.A.a #27	ENSGT00940000154418.a.b	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930 #34	ENSGT00940000158607 #35	ENSGT00940000163436.n.a #37
Steppe mouse	MODERN SPECIES	3151	ENSMSIG00000018158	Clu (ENSMSIG00000018167) #9	Gulo (ENSMSIG00000018184) #10	Adam2 (ENSMSIG00000018204) #11	Ephx2 (ENSMSIG00000018278) #12	Chrna2 (ENSMSIG00000018435) #13	Ptk2b (ENSMSIG00000018459) #14	Trim35 (ENSMSIG00000018652) #15	Stmn4 (ENSMSIG00000018673) #16	Adra1a (ENSMSIG00000018756) #17	Dpysl2 (ENSMSIG00000018782) #18	ENSMSIG00000018813 #19	Pnma2 (ENSMSIG00000018820)	Bnip3l (ENSMSIG00000018832) #20	Ppp2r2a (ENSMSIG00000018898) #21	Ebf2 (ENSMSIG00000019023) #22	ENSMSIG00000019073	ENSMSIG00000019082
spretus	MODERN SPECIES	5	Clu (MGP_SPRETEiJ_G0020324) #9	Gulo (MGP_SPRETEiJ_G0020325) #10	Adam2 (MGP_SPRETEiJ_G0020326) #11	Ephx2 (MGP_SPRETEiJ_G0020327) #12	Chrna2 (MGP_SPRETEiJ_G0020328) #13	Ptk2b (MGP_SPRETEiJ_G0020329) #14	Trim35 (MGP_SPRETEiJ_G0020330) #15	Stmn4 (MGP_SPRETEiJ_G0020331) #16	Adra1a (MGP_SPRETEiJ_G0020332) #17	MGP_SPRETEiJ_G0020333	Dpysl2 (MGP_SPRETEiJ_G0020334) #18	MGP_SPRETEiJ_G0020335 #19	Pnma2 (MGP_SPRETEiJ_G0020336)	Bnip3l (MGP_SPRETEiJ_G0020337) #20	Ppp2r2a (MGP_SPRETEiJ_G0020338) #21	Ebf2 (MGP_SPRETEiJ_G0020339) #22	Cdca2 (MGP_SPRETEiJ_G0020340) #23	Kctd9 (MGP_SPRETEiJ_G0020341) #24	Gnrh1 (MGP_SPRETEiJ_G0020342) #25	Dock5 (MGP_SPRETEiJ_G0020343) #26	Nefm (MGP_SPRETEiJ_G0020344) #27	Nefl (MGP_SPRETEiJ_G0020345) #28	Adam7 (MGP_SPRETEiJ_G0020346) #29	Adamdec1 (MGP_SPRETEiJ_G0020347) #30	Adam28 (MGP_SPRETEiJ_G0020348) #31	Stc1 (MGP_SPRETEiJ_G0020349) #32	Nkx2-6 (MGP_SPRETEiJ_G0020350) #33	Nkx3-1 (MGP_SPRETEiJ_G0020351) #34	Slc25a37 (MGP_SPRETEiJ_G0020352) #35	MGP_SPRETEiJ_G0020354 #37	MGP_SPRETEiJ_G0020355 #37
Ryukyu mouse	MODERN SPECIES	5	Clu (MGP_CAROLIEiJ_G0019432) #9	Gulo (MGP_CAROLIEiJ_G0019433) #10	Adam2 (MGP_CAROLIEiJ_G0019434) #11	Ephx2 (MGP_CAROLIEiJ_G0019435) #12	Chrna2 (MGP_CAROLIEiJ_G0019436) #13	Ptk2b (MGP_CAROLIEiJ_G0019437) #14	Trim35 (MGP_CAROLIEiJ_G0019438) #15	Stmn4 (MGP_CAROLIEiJ_G0019439) #16	Adra1a (MGP_CAROLIEiJ_G0019440) #17	MGP_CAROLIEiJ_G0019441	Dpysl2 (MGP_CAROLIEiJ_G0019442) #18	MGP_CAROLIEiJ_G0019443 #19	Pnma2 (MGP_CAROLIEiJ_G0019444)	Bnip3l (MGP_CAROLIEiJ_G0019445) #20	MGP_CAROLIEiJ_G0019446 #21	Ebf2 (MGP_CAROLIEiJ_G0019447) #22	Cdca2 (MGP_CAROLIEiJ_G0019448) #23	Kctd9 (MGP_CAROLIEiJ_G0019449) #24	Gnrh1 (MGP_CAROLIEiJ_G0019450) #25	Dock5 (MGP_CAROLIEiJ_G0019451) #26	Nefm (MGP_CAROLIEiJ_G0019452) #27	Nefl (MGP_CAROLIEiJ_G0019453) #28	Adam7 (MGP_CAROLIEiJ_G0019454) #29	Adamdec1 (MGP_CAROLIEiJ_G0019455) #30	Adam28 (MGP_CAROLIEiJ_G0019456) #31	Stc1 (MGP_CAROLIEiJ_G0019457) #32	Nkx2-6 (MGP_CAROLIEiJ_G0019458) #33	Nkx3-1 (MGP_CAROLIEiJ_G0019459) #34	Slc25a37 (MGP_CAROLIEiJ_G0019460) #35	MGP_CAROLIEiJ_G0019461	MGP_CAROLIEiJ_G0019462 #37
Rat	MODERN SPECIES	6	Ccdc25 (ENSRNOG00000015939) #7	Scara3 (ENSRNOG00000016177) #8	Clu (ENSRNOG00000016460) #9	Gulo (ENSRNOG00000016648) #10	Adam2 (ENSRNOG00000017027) #11	Ephx2 (ENSRNOG00000017286) #12	Chrna2 (ENSRNOG00000017424) #13	Ptk2b (ENSRNOG00000027839) #14	Trim35 (ENSRNOG00000009449) #15	Stmn4 (ENSRNOG00000053334) #16	Adra1a (ENSRNOG00000009522) #17	Dpysl2 (ENSRNOG00000009625) #18	Pnma2 (ENSRNOG00000009815)	Bnip3l (ENSRNOG00000009820) #20	Ppp2r2a (ENSRNOG00000011158) #21	Ebf2 (ENSRNOG00000011548) #22	Cdca2 (ENSRNOG00000025302) #23	Gnrh1 (ENSRNOG00000066847) #25	Kctd9 (ENSRNOG00000012951) #24	Gnrh1 (ENSRNOG00000013433)	Dock5 (ENSRNOG00000024703) #26	LOC120097172 (ENSRNOG00000031532)	Nefl (ENSRNOG00000013658) #28	Nefm (ENSRNOG00000013916)	Adam7 (ENSRNOG00000014054) #29	Adamdec1 (ENSRNOG00000030724) #30	Adam28 (ENSRNOG00000014518) #31	ENSRNOG00000063586 #31	AABR07018269.1 (ENSRNOG00000031720)	ENSRNOG00000063939	ENSRNOG00000067366
Cricetidae	ANCESTRAL SPECIES	15	ENSGT00940000158238 #8	ENSGT00530000063668.B #9	ENSGT00510000049722 #10	ENSGT00940000161961 #11	ENSGT00940000158614 #12	ENSGT00940000158299 #13	ENSGT00940000157269.a.a #14	ENSGT00940000160868 #15	ENSGT01030000234597.a.b.a #16	ENSGT00940000159105 #17	ENSGT01030000234527.A.a.b.a.a #18	ENSGT00860000136257 #19	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b.p #20	ENSGT00950000182864.a.b.a #21	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #28	ENSGT00940000154418.a.b	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930 #34	ENSGT00940000158607 #35	ENSGT00940000163436.n.a #37	ENSGT01100000263540.B.d
Cricetinae	ANCESTRAL SPECIES	18	ENSGT00940000158238 #8	ENSGT00530000063668.B #9	ENSGT00510000049722 #10	ENSGT00940000161961 #11	ENSGT00940000158614 #12	ENSGT00940000158299 #13	ENSGT00940000157269.a.a #14	ENSGT00940000160868 #15	ENSGT01030000234597.a.b.a #16	ENSGT00940000159105 #17	ENSGT01030000234527.A.a.b.a.a #18	ENSGT00860000136257 #19	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b.p #20	ENSGT00950000182864.a.b.a #21	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #28	ENSGT00940000154418.a.b	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930 #34	ENSGT00940000158607 #35	ENSGT00940000163436.n.a #37	ENSGT01100000263540.B.d
Chinese hamster chok1gshd	MODERN SPECIES	3	Gulo (ENSCGRG00001019987) #10	Adam2 (ENSCGRG00001012300) #11	Ephx2 (ENSCGRG00001003555) #12	ENSCGRG00001003198	Chrna2 (ENSCGRG00001025060) #13	Ptk2b (ENSCGRG00001013042) #14	Trim35 (ENSCGRG00001019610) #15	ENSCGRG00001009280	Stmn4 (ENSCGRG00001008937) #16	Adra1a (ENSCGRG00001023093) #17	Dpysl2 (ENSCGRG00001016379) #18	ENSCGRG00001010421 #19	Pnma2 (ENSCGRG00001010753)	Bnip3l (ENSCGRG00001021504) #20	Ppp2r2a (ENSCGRG00001015307) #21	Ebf2 (ENSCGRG00001001432) #22	Cdca2 (ENSCGRG00001022349) #23	Kctd9 (ENSCGRG00001022797) #24	Gnrh1 (ENSCGRG00001000327) #25	Dock5 (ENSCGRG00001021195) #26	Nefl (ENSCGRG00001016408) #28	ENSCGRG00001011263	Adam7 (ENSCGRG00001010547) #29	Adamdec1 (ENSCGRG00001013228) #30	Adam28 (ENSCGRG00001009338) #31	Stc1 (ENSCGRG00001019183) #32	Nkx2-6 (ENSCGRG00001007878) #33	Nkx3-1 (ENSCGRG00001019912) #34	Slc25a37 (ENSCGRG00001008508) #35	Synb (ENSCGRG00001011259) #37	ENSCGRG00001018845
Golden Hamster	MODERN SPECIES	670	Ccdc25 (ENSMAUG00000018478) #7	Scara3 (ENSMAUG00000008370) #8	Clu (ENSMAUG00000001027) #9	Gulo (ENSMAUG00000013257) #10	Adam2 (ENSMAUG00000021964) #11	Ephx2 (ENSMAUG00000010745) #12	Chrna2 (ENSMAUG00000009044) #13	Ptk2b (ENSMAUG00000018808) #14	Trim35 (ENSMAUG00000010808) #15	Stmn4 (ENSMAUG00000012567) #16	Adra1a (ENSMAUG00000019248) #17	Dpysl2 (ENSMAUG00000006007) #18	ENSMAUG00000020770 #19	Bnip3l (ENSMAUG00000007015) #20	Ppp2r2a (ENSMAUG00000019855) #21	Ebf2 (ENSMAUG00000015832) #22	Cdca2 (ENSMAUG00000011109) #23	Kctd9 (ENSMAUG00000012597) #24	Gnrh1 (ENSMAUG00000008244) #25	Dock5 (ENSMAUG00000008971) #26	ENSMAUG00000005425 #28	ENSMAUG00000017900
Cricetidae_B	ANCESTRAL SPECIES	11	ENSGT00940000158238 #8	ENSGT00530000063668.B #9	ENSGT00510000049722 #10	ENSGT00940000161961 #11	ENSGT00940000158614 #12	ENSGT00940000158299 #13	ENSGT00940000157269.a.a #14	ENSGT00940000160868 #15	ENSGT01030000234597.a.b.a #16	ENSGT00940000159105 #17	ENSGT01030000234527.A.a.b.a.a #18	ENSGT00860000136257 #19	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b.p #20	ENSGT00950000182864.a.b.a #21	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #28	ENSGT00940000161685.A.a #27	ENSGT00940000154418.a.b	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930 #34	ENSGT00940000158607 #35	ENSGT00940000163436.n.a #37
Prairie vole	MODERN SPECIES	4	Clu (ENSMOCG00000014457) #9	Gulo (ENSMOCG00000017457) #10	Adam2 (ENSMOCG00000013262) #11	Ephx2 (ENSMOCG00000022783) #12	Chrna2 (ENSMOCG00000019567) #13	Ptk2b (ENSMOCG00000004454) #14	Trim35 (ENSMOCG00000021886) #15	Stmn4 (ENSMOCG00000015586) #16	Adra1a (ENSMOCG00000018438) #17	Dpysl2 (ENSMOCG00000016303) #18	ENSMOCG00000006051 #19	Pnma2 (ENSMOCG00000003712)	ENSMOCG00000018617 #20	Ppp2r2a (ENSMOCG00000011317) #21	ENSMOCG00000005189	Ebf2 (ENSMOCG00000007295) #22	Cdca2 (ENSMOCG00000002388) #23	Kctd9 (ENSMOCG00000016913) #24	Gnrh1 (ENSMOCG00000003491) #25	Dock5 (ENSMOCG00000009188) #26	Nefl (ENSMOCG00000012988) #28	ENSMOCG00000009013	Adam7 (ENSMOCG00000022709) #29	Adamdec1 (ENSMOCG00000021493) #30	Adam28 (ENSMOCG00000010153) #31	Stc1 (ENSMOCG00000003351) #32	Nkx2-6 (ENSMOCG00000002130) #33	Nkx3-1 (ENSMOCG00000001078) #34	Slc25a37 (ENSMOCG00000000710) #35	Synb (ENSMOCG00000018779) #37	ENSMOCG00000021822
Northern American deer mouse	MODERN SPECIES	22	Ccdc25 (ENSPEMG00000021280) #7	Scara3 (ENSPEMG00000021066) #8	Clu (ENSPEMG00000021652) #9	Gulo (ENSPEMG00000021556) #10	Adam2 (ENSPEMG00000021163) #11	Ephx2 (ENSPEMG00000023642) #12	Chrna2 (ENSPEMG00000023959) #13	Ptk2b (ENSPEMG00000017057) #14	Trim35 (ENSPEMG00000030578) #15	Stmn4 (ENSPEMG00000021636) #16	Adra1a (ENSPEMG00000021686) #17	Dpysl2 (ENSPEMG00000021785) #18	Pnma2 (ENSPEMG00000025483)	ENSPEMG00000023103 #20	Ppp2r2a (ENSPEMG00000022593) #21	Ebf2 (ENSPEMG00000007776) #22	Cdca2 (ENSPEMG00000021129) #23	Kctd9 (ENSPEMG00000020895) #24	Gnrh1 (ENSPEMG00000030807) #25	Dock5 (ENSPEMG00000023361) #26	Nefl (ENSPEMG00000020765) #28	Nefm (ENSPEMG00000020646) #27	Adam7 (ENSPEMG00000012803) #29	Adamdec1 (ENSPEMG00000004402) #30	Adam28 (ENSPEMG00000015520) #31	ENSPEMG00000030090	ENSPEMG00000027026	Stc1 (ENSPEMG00000027424) #32	Nkx2-6 (ENSPEMG00000005851) #33	Nkx3-1 (ENSPEMG00000026785) #34	Slc25a37 (ENSPEMG00000017275) #35
Upper Galilee mountains blind mole rat	MODERN SPECIES	739												Adra1a (ENSNGAG00000013950) #17	Dpysl2 (ENSNGAG00000024011) #18	ENSNGAG00000022123 ##20	Ppp2r2a (ENSNGAG00000023568) #21	Ebf2 (ENSNGAG00000019824) #22	Cdca2 (ENSNGAG00000015418) #23	Kctd9 (ENSNGAG00000023863) #24	Gnrh1 (ENSNGAG00000018104) #25	Dock5 (ENSNGAG00000023947) #26	ENSNGAG00000022190	ENSNGAG00000021748
Lesser Egyptian jerboa	MODERN SPECIES	125	ENSJJAG00000016351 #7	Scara3 (ENSJJAG00000015535) #8	Clu (ENSJJAG00000011133) #9	Gulo (ENSJJAG00000008997) #10	Adam2 (ENSJJAG00000021729) #11	Ephx2 (ENSJJAG00000021412) #12	Chrna2 (ENSJJAG00000018111) #13	Ptk2b (ENSJJAG00000013115) #14	Trim35 (ENSJJAG00000011832) #15	ENSJJAG00000011170	Stmn4 (ENSJJAG00000010283) #16	Adra1a (ENSJJAG00000008597) #17	Dpysl2 (ENSJJAG00000021965) #18	ENSJJAG00000021430 ##20	Ppp2r2a (ENSJJAG00000020800) #21	Ebf2 (ENSJJAG00000018635) #22	ENSJJAG00000016051 #23	Kctd9 (ENSJJAG00000014248) #24	Gnrh1 (ENSJJAG00000013753) #25	Dock5 (ENSJJAG00000012658) #26	Nefl (ENSJJAG00000011034) #28	Nefm (ENSJJAG00000018709) #27	Adam7 (ENSJJAG00000016655) #29	Adamdec1 (ENSJJAG00000015285) #30	Adam28 (ENSJJAG00000014433) #31	Stc1 (ENSJJAG00000013494) #32	Nkx2-6 (ENSJJAG00000013412) #33	Nkx3-1 (ENSJJAG00000013332) #34	ENSJJAG00000012211	Slc25a37 (ENSJJAG00000012106) #35	ENSJJAG00000010447
Kangaroo rat	MODERN SPECIES	506											Adra1a (ENSDORG00000005782) #17	Dpysl2 (ENSDORG00000023604) #18	Pnma2 (ENSDORG00000009340)	Bnip3l (ENSDORG00000028719) ##20	Ppp2r2a (ENSDORG00000019723) #21	Ebf2 (ENSDORG00000019864) #22	ENSDORG00000007254 #23	Kctd9 (ENSDORG00000007253) #24	Gnrh1 (ENSDORG00000007251) #25	Dock5 (ENSDORG00000012003) #26	Nefl (ENSDORG00000025560) #28	ENSDORG00000027287 #27	Adam7 (ENSDORG00000007281) #29	Adamdec1 (ENSDORG00000007279) #30	Adam28 (ENSDORG00000001473) #31	Stc1 (ENSDORG00000023767) #32	ENSDORG00000024859 #34	Slc25a37 (ENSDORG00000026005) #35	ENSDORG00000008983	Loxl2 (ENSDORG00000011153)	R3hcc1 (ENSDORG00000026365)
Rodentia_A	ANCESTRAL SPECIES	21	ENSGT00390000004380 #7	ENSGT00940000158238 #8	ENSGT00530000063668.B #9	ENSGT00510000049722 #10	ENSGT00940000161961 #11	ENSGT00940000158614 #12	ENSGT00940000158299 #13	ENSGT00940000157269.a.a #14	ENSGT00940000160868 #15	ENSGT01030000234597.a.b.a #16	ENSGT00940000159105 #17	ENSGT01030000234527.A.a.b.a.a #18	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b #20	ENSGT00950000182864.a.b.a #21	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #28	ENSGT00940000161685.A.a #27	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930 #34	ENSGT00940000158607 #35	ENSGT00940000172945	ENSGT01100000263540.B.d
Sciuridae	ANCESTRAL SPECIES	29	ENSGT00390000004380 #7	ENSGT00940000158238 #8	ENSGT00530000063668.B #9	ENSGT00510000049722 #10	ENSGT00940000161961 #11	ENSGT00940000158614 #12	ENSGT00940000158299 #13	ENSGT00940000157269.a.a #14	ENSGT00940000160868 #15	ENSGT01030000234597.a.b.a #16	ENSGT00940000159105 #17	ENSGT01030000234527.A.a.b.a.a #18	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b #20	ENSGT00950000182864.a.b.a #21	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314.j #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #28	ENSGT00940000161685.A.a #27	ENSGT00940000154418.a.b	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930 #34	ENSGT00940000158607 #35	ENSGT01100000263540.B.d
Marmotini	ANCESTRAL SPECIES	30	ENSGT00390000004380 #7	ENSGT00940000158238 #8	ENSGT00530000063668.B #9	ENSGT00510000049722 #10	ENSGT00940000161961 #11	ENSGT00940000158614 #12	ENSGT00940000158299 #13	ENSGT00940000157269.a.a #14	ENSGT00940000160868 #15	ENSGT01030000234597.a.b.a #16	ENSGT00940000159105 #17	ENSGT01030000234527.A.a.b.a.a #18	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b #20	ENSGT00950000182864.a.b.a #21	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314.j #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #28	ENSGT00940000161685.A.a #27	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00940000159453.e.b	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930 #34	ENSGT00940000158607 #35	ENSGT01100000263540.B.d
Marmotini_b	ANCESTRAL SPECIES	241												ENSGT00940000159105 #17	ENSGT01030000234527.A.a.b.a.a #18	ENSGT00390000013415.a.b #20	ENSGT00950000182864.a.b.a #21	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314.j #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #28	ENSGT00940000161685.A.a #27
Arctic ground squirrel	MODERN SPECIES	498													PNMA2 (ENSUPAG00010022624)	BNIP3L (ENSUPAG00010022623) #20	PPP2R2A (ENSUPAG00010022619) #21	EBF2 (ENSUPAG00010022616) #22	CDCA2 (ENSUPAG00010022612) #23	KCTD9 (ENSUPAG00010022608) #24	GNRH1 (ENSUPAG00010022605) #25	DOCK5 (ENSUPAG00010022602) #26
Squirrel	MODERN SPECIES	357												ADRA1A (ENSSTOG00000019888) #17	DPYSL2 (ENSSTOG00000004052) #18	BNIP3L (ENSSTOG00000004029) #20	PPP2R2A (ENSSTOG00000023339) #21	EBF2 (ENSSTOG00000007966) #22	CDCA2 (ENSSTOG00000008812) #23	KCTD9 (ENSSTOG00000008797) #24	GNRH1 (ENSSTOG00000008794) #25	DOCK5 (ENSSTOG00000008718) #26	NEFL (ENSSTOG00000019640) #28	NEFM (ENSSTOG00000019862)
Alpin marmot	MODERN SPECIES	61	SCARA3 (ENSMMMG00000013090) #8	CLU (ENSMMMG00000013091) #9	ENSMMMG00000013102 #10	ADAM2 (ENSMMMG00000013126) #11	EPHX2 (ENSMMMG00000013154) #12	ENSMMMG00000013222 #13	PTK2B (ENSMMMG00000013250) #14	ENSMMMG00000013471 #15	STMN4 (ENSMMMG00000013482) #16	ADRA1A (ENSMMMG00000013560) #17	DPYSL2 (ENSMMMG00000013573) #18	PNMA2 (ENSMMMG00000013583)	BNIP3L (ENSMMMG00000013590) #20	PPP2R2A (ENSMMMG00000013593) #21	ENSMMMG00000013633	EBF2 (ENSMMMG00000013647) #22	ENSMMMG00000013653	CDCA2 (ENSMMMG00000013660) #23	KCTD9 (ENSMMMG00000013722) #24	ENSMMMG00000013769	GNRH1 (ENSMMMG00000013776) #25	DOCK5 (ENSMMMG00000013783) #26	ENSMMMG00000013835	NEFL (ENSMMMG00000013840) #28	ENSMMMG00000013849 #27	ADAM7 (ENSMMMG00000013881) #29	ADAMDEC1 (ENSMMMG00000013904) #30	ADAM28 (ENSMMMG00000013926) #31	ENSMMMG00000013954	STC1 (ENSMMMG00000013958) #32	NKX2-6 (ENSMMMG00000013962) #33
Eurasian red squirrel	MODERN SPECIES	14	CLU (ENSSVLG00005002257) #9	ENSSVLG00005002289 #10	ADAM2 (ENSSVLG00005002341) #11	EPHX2 (ENSSVLG00005002467) #12	CHRNA2 (ENSSVLG00005002577) #13	PTK2B (ENSSVLG00005002627) #14	ENSSVLG00005002776	TRIM35 (ENSSVLG00005002788) #15	STMN4 (ENSSVLG00005002831) #16	ZFP57 (ENSSVLG00005002906)	ADRA1A (ENSSVLG00005002931) #17	DPYSL2 (ENSSVLG00005002961) #18	PNMA2 (ENSSVLG00005003028)	ENSSVLG00005003040 #20	ENSSVLG00005003080 #21	EBF2 (ENSSVLG00005003172) #22	CDCA2 (ENSSVLG00005003275) #23	KCTD9 (ENSSVLG00005003331) #24	GNRH1 (ENSSVLG00005003367) #25	DOCK5 (ENSSVLG00005003397) #26	ENSSVLG00005003428	ENSSVLG00005003443	NEFL (ENSSVLG00005003461) #28	NEFM (ENSSVLG00005003494)	ADAM7 (ENSSVLG00005003562) #29	ADAMDEC1 (ENSSVLG00005003660) #30	ADAM28 (ENSSVLG00005003701) #31	STC1 (ENSSVLG00005003730) #32	NKX2-6 (ENSSVLG00005003752) #33	NKX3-1 (ENSSVLG00005003772) #34	SLC25A37 (ENSSVLG00005003790) #35
Hystricomorpha	ANCESTRAL SPECIES	21	ENSGT00940000158598	ENSGT00390000004380.p #7	ENSGT00940000158238 #8	ENSGT00530000063668.B #9	ENSGT00510000049722 #10	ENSGT00940000161961 #11	ENSGT00940000158614 #12	ENSGT00940000158299 #13	ENSGT00940000157269.a.a #14	ENSGT00940000160868 #15	ENSGT01030000234597.a.b.a #16	ENSGT00940000159105 #17	ENSGT01030000234527.A.a.b.a.a #18	ENSGT00390000013415.a.b #20	ENSGT00950000182864.a.b.a #21	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #28	ENSGT00940000161685.A.a #27	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930 #34	ENSGT00940000158607 #35	ENSGT00940000172945	ENSGT01100000263540.B.d
Naked mole-rat female	MODERN SPECIES	25	EPHX2 (ENSHGLG00000005581) #12	CHRNA2 (ENSHGLG00000004833) #13	PTK2B (ENSHGLG00000015272) #14	TRIM35 (ENSHGLG00000034100) #15	STMN4 (ENSHGLG00000016773) #16	ENSHGLG00000045878	ADRA1A (ENSHGLG00000009186) #17	ENSHGLG00000048177	ENSHGLG00000046165	DPYSL2 (ENSHGLG00000005797) #18	PNMA2 (ENSHGLG00000045190)	ENSHGLG00000044794	BNIP3L (ENSHGLG00000041171) #20	ENSHGLG00000009150 #21	ENSHGLG00000045544	ENSHGLG00000004897 #22	ENSHGLG00000010256	CDCA2 (ENSHGLG00000037894) #23	ENSHGLG00000036572	ENSHGLG00000018824 #24	GNRH1 (ENSHGLG00000017902) #25	DOCK5 (ENSHGLG00000017514) #26	ENSHGLG00000050046	NEFL (ENSHGLG00000017653) #28	ENSHGLG00000019352 #27	ENSHGLG00000036278	ADAM7 (ENSHGLG00000017673) #29	ADAMDEC1 (ENSHGLG00000011872) #30	ADAM28 (ENSHGLG00000018858) #31	ENSHGLG00000040240	STC1 (ENSHGLG00000040196) #32
Hystricomorpha_a	ANCESTRAL SPECIES	20	ENSGT00940000158598	ENSGT00390000004380.p #7	ENSGT00940000158238 #8	ENSGT00530000063668.B #9	ENSGT00510000049722 #10	ENSGT00940000161961 #11	ENSGT00940000158614 #12	ENSGT00940000158299 #13	ENSGT00940000157269.a.a #14	ENSGT00940000160868 #15	ENSGT01030000234597.a.b.a #16	ENSGT00940000159105 #17	ENSGT01030000234527.A.a.b.a.a #18	ENSGT00390000013415.a.b #20	ENSGT00950000182864.a.b.a #21	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #28	ENSGT00940000161685.A.a #27	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930 #34	ENSGT00940000158607 #35	ENSGT01100000263540.B.d	ENSGT00940000155874
Guinea pig	MODERN SPECIES	1	PBK (ENSCPOG00000010826)	ESCO2 (ENSCPOG00000024189)	CCDC25 (ENSCPOG00000038303) #7	SCARA3 (ENSCPOG00000034540) #8	CLU (ENSCPOG00000019546) #9	ADAM2 (ENSCPOG00000022133) #11	EPHX2 (ENSCPOG00000037609) #12	CHRNA2 (ENSCPOG00000038123) #13	PTK2B (ENSCPOG00000004602) #14	TRIM35 (ENSCPOG00000032287) #15	STMN4 (ENSCPOG00000005528) #16	ADRA1A (ENSCPOG00000038399) #17	DPYSL2 (ENSCPOG00000025679) #18	BNIP3L (ENSCPOG00000034680) #20	PPP2R2A (ENSCPOG00000026784) #21	EBF2 (ENSCPOG00000001463) #22	CDCA2 (ENSCPOG00000036890) #23	KCTD9 (ENSCPOG00000015540) #24	GNRH1 (ENSCPOG00000015538) #25	DOCK5 (ENSCPOG00000015533) #26	NEFL (ENSCPOG00000023838) #28	ENSCPOG00000027410 #27	ADAM7 (ENSCPOG00000001538) #29	ADAMDEC1 (ENSCPOG00000038140) #30	ADAM28 (ENSCPOG00000009707) #31	STC1 (ENSCPOG00000034351) #32	NKX3-1 (ENSCPOG00000040229) #34	SLC25A37 (ENSCPOG00000035237) #35	ENTPD4 (ENSCPOG00000009705)	LOXL2 (ENSCPOG00000009701)	R3HCC1 (ENSCPOG00000009696)
Hystricomorpha_b	ANCESTRAL SPECIES	30	ENSGT00940000158598	ENSGT00390000004380.p #7	ENSGT00940000158238 #8	ENSGT00530000063668.B #9	ENSGT00510000049722 #10	ENSGT00940000161961 #11	ENSGT00940000158614 #12	ENSGT00940000158299 #13	ENSGT00940000157269.a.a #14	ENSGT00940000160868 #15	ENSGT01030000234597.a.b.a #16	ENSGT00940000159105 #17	ENSGT01030000234527.A.a.b.a.a #18	ENSGT00390000013415.a.b #20	ENSGT00950000182864.a.b.a #21	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #28	ENSGT00940000161685.A.a #27	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930 #34	ENSGT00940000158607 #35	ENSGT01100000263540.B.d	ENSGT00940000155874
Degu	MODERN SPECIES	77	CLU (ENSODEG00000007758) #9	ENSODEG00000012794 #10	ADAM2 (ENSODEG00000008302) #11	EPHX2 (ENSODEG00000007405) #12	CHRNA2 (ENSODEG00000008004) #13	PTK2B (ENSODEG00000009950) #14	TRIM35 (ENSODEG00000008434) #15	STMN4 (ENSODEG00000006658) #16	ENSODEG00000010902	ADRA1A (ENSODEG00000007554) #17	DPYSL2 (ENSODEG00000007667) #18	ENSODEG00000007526	ENSODEG00000007362 #20	ENSODEG00000006781 #21	ENSODEG00000007854	EBF2 (ENSODEG00000007640) #22	ENSODEG00000006905	ENSODEG00000007418 #23	KCTD9 (ENSODEG00000008616) #24	GNRH1 (ENSODEG00000007834) #25	DOCK5 (ENSODEG00000007523) #26	NEFL (ENSODEG00000007183) #28	NEFM (ENSODEG00000008392)	ENSODEG00000007521	ADAM7 (ENSODEG00000007547) #29	ADAMDEC1 (ENSODEG00000008034) #30	ADAM28 (ENSODEG00000007875) #31	STC1 (ENSODEG00000007382) #32	NKX2-6 (ENSODEG00000007413) #33	NKX3-1 (ENSODEG00000007004) #34	SLC25A37 (ENSODEG00000007363) #35
Long-tailed chinchilla	MODERN SPECIES	110	ESCO2 (ENSCLAG00000017015)	CCDC25 (ENSCLAG00000013927) #7	SCARA3 (ENSCLAG00000016246) #8	CLU (ENSCLAG00000014457) #9	ENSCLAG00000014336 #10	ADAM2 (ENSCLAG00000014916) #11	EPHX2 (ENSCLAG00000014569) #12	CHRNA2 (ENSCLAG00000016813) #13	PTK2B (ENSCLAG00000015285) #14	TRIM35 (ENSCLAG00000014327) #15	STMN4 (ENSCLAG00000014584) #16	ADRA1A (ENSCLAG00000014689) #17	DPYSL2 (ENSCLAG00000015960) #18	BNIP3L (ENSCLAG00000016223) #20	PPP2R2A (ENSCLAG00000013984) #21	EBF2 (ENSCLAG00000013500) #22	CDCA2 (ENSCLAG00000011981) #23	KCTD9 (ENSCLAG00000013948) #24	GNRH1 (ENSCLAG00000014234) #25	DOCK5 (ENSCLAG00000015174) #26	NEFL (ENSCLAG00000014935) #28	ENSCLAG00000013799 #27	ADAM7 (ENSCLAG00000013174) #29	ENSCLAG00000015375 #30	ADAM28 (ENSCLAG00000016310) #31	ENSCLAG00000015807	STC1 (ENSCLAG00000014786) #32	NKX2-6 (ENSCLAG00000014720) #33	NKX3-1 (ENSCLAG00000013957) #34	SLC25A37 (ENSCLAG00000014235) #35	ENTPD4 (ENSCLAG00000013899)