Euteleostomi DUPLICATION Euteleostomi ANCESTRAL SPECIES ENSGT00950000182859.A.a.a.b #22 Sarcopterygii ANCESTRAL SPECIES 159 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00390000008694.b.b ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000157556 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 ENSGT00530000063711.a ENSGT00940000179863 ENSGT00390000000134.b Tetrapoda ANCESTRAL SPECIES 115 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00960000187172 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000157556 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 ENSGT00530000063711.a ENSGT00940000179863 Amniota ANCESTRAL SPECIES 33 ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000158877 ENSGT00390000004965 ENSGT00390000008694.b.b ENSGT00950000182953.C.c ENSGT00940000158546 ENSGT00510000049083.b ENSGT00940000154909 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT00940000172945 ENSGT01100000263540.B.d #37 ENSGT00940000155874 ENSGT00530000063711.a Mammalia ANCESTRAL SPECIES 27 ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000158877 ENSGT00390000004965 ENSGT00390000008694.b.b ENSGT00950000182953.C.c ENSGT00940000158546 ENSGT00390000017668 ENSGT00510000049083.b ENSGT00940000154909 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT01000000222164 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000154418.a.b #28 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT00940000172945 ENSGT01100000263540.B.d #37 Theria ANCESTRAL SPECIES 38 ENSGT00940000154909 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000165452.b ENSGT00940000160930 #34 ENSGT00940000158607 #35 Eutheria ANCESTRAL SPECIES 2 ENSGT00950000185082 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT00940000172945 Boreoeutheria ANCESTRAL SPECIES 8 ENSGT00950000185082 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT00940000172945 Euarchontoglires ANCESTRAL SPECIES 24 ENSGT00940000158598 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT00940000172945 Primates ANCESTRAL SPECIES 25 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 Haplorrhini ANCESTRAL SPECIES 27 ENSGT00390000007091 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 Simiiformes ANCESTRAL SPECIES 25 ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380.m.a #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314.k.b ##24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT00910000147907 #36 ENSGT01100000263540.B.d #37 Platyrrhini ANCESTRAL SPECIES 29 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380.m.a #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314.l #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT00910000147907 #36 ENSGT01100000263540.B.d #37 Mas night monkey MODERN SPECIES 974 ENSANAG00000027853 #7 SCARA3 (ENSANAG00000032323) #8 CLU (ENSANAG00000032018) #9 EPHX2 (ENSANAG00000006028) #10 CHRNA2 (ENSANAG00000023714) #11 PTK2B (ENSANAG00000034147) #12 TRIM35 (ENSANAG00000034109) #13 STMN4 (ENSANAG00000021238) #14 ENSANAG00000032951 #15 ADRA1A (ENSANAG00000022712) #16 ENSANAG00000034640 #17 DPYSL2 (ENSANAG00000034307) #18 ENSANAG00000031085 #19 BNIP3L (ENSANAG00000025801) #20 PPP2R2A (ENSANAG00000033237) #21 EBF2 (ENSANAG00000022835) #22 CDCA2 (ENSANAG00000037820) #23 ENSANAG00000025804 #24 GNRH1 (ENSANAG00000034874) #25 DOCK5 (ENSANAG00000032901) #26 NEFL (ENSANAG00000022798) #27 NEFM (ENSANAG00000029941) #28 ADAM7 (ENSANAG00000024071) #29 ADAMDEC1 (ENSANAG00000023742) #30 ADAM28 (ENSANAG00000026076) #31 STC1 (ENSANAG00000026165) #32 NKX2-6 (ENSANAG00000027024) #33 NKX3-1 (ENSANAG00000037342) #34 SLC25A37 (ENSANAG00000035262) #35 ENSANAG00000034733 #36 ENTPD4 (ENSANAG00000038166) #37 Cebidae ANCESTRAL SPECIES 30 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380.m.a #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314.l #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 Marmoset MODERN SPECIES 4 ESCO2 (ENSCJAG00000015416) ENSCJAG00000052322 #7 SCARA3 (ENSCJAG00000019539) #8 CLU (ENSCJAG00000019662) #9 EPHX2 (ENSCJAG00000019677) #10 CHRNA2 (ENSCJAG00000019690) #11 PTK2B (ENSCJAG00000019574) #12 TRIM35 (ENSCJAG00000019863) #13 STMN4 (ENSCJAG00000019866) #14 ADRA1A (ENSCJAG00000080222) #16 ENSCJAG00000084865 DPYSL2 (ENSCJAG00000042451) #18 BNIP3L (ENSCJAG00000075722) #20 PPP2R2A (ENSCJAG00000019902) #21 ENSCJAG00000077305 EBF2 (ENSCJAG00000019921) #22 ENSCJAG00000084648 CDCA2 (ENSCJAG00000019958) #23 KCTD9 (ENSCJAG00000019969) #24 DOCK5 (ENSCJAG00000019986) #26 NEFL (ENSCJAG00000020035) #27 ENSCJAG00000010608 ENSCJAG00000082023 NEFM (ENSCJAG00000020047) #28 ENSCJAG00000076019 ENSCJAG00000070069 ADAM7 (ENSCJAG00000020053) #29 ADAMDEC1 (ENSCJAG00000020062) #30 ADAM28 (ENSCJAG00000020075) #31 ENSCJAG00000064111 ENSCJAG00000082609 Cebidae_a ANCESTRAL SPECIES 44 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380.m.a #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314.l #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 Capuchin DUPLICATION Capuchin MODERN SPECIES 125 PBK (ENSCCAG00000026612) ESCO2 (ENSCCAG00000020110) CCDC25 (ENSCCAG00000037254) ##7 SCARA3 (ENSCCAG00000036648) #8 CLU (ENSCCAG00000019707) #9 EPHX2 (ENSCCAG00000028330) #10 CHRNA2 (ENSCCAG00000025139) #11 PTK2B (ENSCCAG00000027006) #12 TRIM35 (ENSCCAG00000036836) #13 STMN4 (ENSCCAG00000024945) #14 ENSCCAG00000021336 #15 ADRA1A (ENSCCAG00000017294) #16 DPYSL2 (ENSCCAG00000034157) #18 BNIP3L (ENSCCAG00000037644) #20 PPP2R2A (ENSCCAG00000026114) #21 ENSCCAG00000029792 #22 Capuchin MODERN SPECIES 221 ENSCCAG00000017319 #22 CDCA2 (ENSCCAG00000026541) #23 ENSCCAG00000030611 #24 GNRH1 (ENSCCAG00000030404) #25 DOCK5 (ENSCCAG00000033128) #26 ENSCCAG00000004867 NEFL (ENSCCAG00000035869) #27 NEFM (ENSCCAG00000028697) #28 ADAM7 (ENSCCAG00000028360) #29 ADAMDEC1 (ENSCCAG00000034847) #30 ADAM28 (ENSCCAG00000021142) #31 STC1 (ENSCCAG00000029913) #32 NKX2-6 (ENSCCAG00000030537) #33 NKX3-1 (ENSCCAG00000029164) #34 SLC25A37 (ENSCCAG00000029132) #35 ENTPD4 (ENSCCAG00000022243) #37 Bolivian squirrel monkey MODERN SPECIES 132 NUGGC (ENSSBOG00000028930) SCARA5 (ENSSBOG00000028648) ESCO2 (ENSSBOG00000023036) ENSSBOG00000032304 #7 SCARA3 (ENSSBOG00000021459) #8 CLU (ENSSBOG00000030641) #9 EPHX2 (ENSSBOG00000034083) #10 CHRNA2 (ENSSBOG00000032890) #11 PTK2B (ENSSBOG00000020869) #12 TRIM35 (ENSSBOG00000023023) #13 STMN4 (ENSSBOG00000027671) #14 ADRA1A (ENSSBOG00000019482) #16 DPYSL2 (ENSSBOG00000022904) #18 BNIP3L (ENSSBOG00000001484) #20 PPP2R2A (ENSSBOG00000022095) #21 EBF2 (ENSSBOG00000029332) #22 CDCA2 (ENSSBOG00000025034) #23 KCTD9 (ENSSBOG00000020467) #24 GNRH1 (ENSSBOG00000030355) #25 DOCK5 (ENSSBOG00000018389) #26 ENSSBOG00000031985 #27 ENSSBOG00000026028 ADAM7 (ENSSBOG00000033466) #29 ADAMDEC1 (ENSSBOG00000023422) #30 ADAM28 (ENSSBOG00000021104) #31 STC1 (ENSSBOG00000008335) #32 NKX2-6 (ENSSBOG00000001212) #33 NKX3-1 (ENSSBOG00000031270) #34 ENSSBOG00000030155 ENSSBOG00000027698 #36 SLC25A37 (ENSSBOG00000033528) #35 Catarrhini ANCESTRAL SPECIES 15 ENSGT00940000158598 ENSGT00390000004380.m.a.b #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00960000186788 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314.k.b.a ##24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT00910000147907 #36 ENSGT01100000263540.B.d #37 Cercopithecidae ANCESTRAL SPECIES 14 ENSGT00390000004380.m.a.b #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00960000186788 ENSGT00390000013415.a.b #20 ENSGT00390000010355.r ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314.k.b.a ##24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00910000147038 ENSGT00940000158607 #35 ENSGT00910000147907 #36 Cercopithecinae ANCESTRAL SPECIES 16 ENSGT00940000158598 ENSGT00390000004380.m.a.b #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00390000010355.r ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314.k.b.a ##24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00910000147038 ENSGT00940000158607 #35 ENSGT00940000155597.n.b Vervet Monkey DUPLICATION Vervet Monkey MODERN SPECIES 27 PBK (ENSCSAG00000015961) ESCO2 (ENSCSAG00000015966) CCDC25 (ENSCSAG00000015972) ##7 SCARA3 (ENSCSAG00000015975) #8 CLU (ENSCSAG00000015978) #9 EPHX2 (ENSCSAG00000015986) #10 CHRNA2 (ENSCSAG00000015995) #11 PTK2B (ENSCSAG00000016005) #12 TRIM35 (ENSCSAG00000016014) #13 STMN4 (ENSCSAG00000016018) #14 ADRA1A (ENSCSAG00000016022) #16 DPYSL2 (ENSCSAG00000016049) #18 PNMA2 (ENSCSAG00000018524) BNIP3L (ENSCSAG00000016055) #20 PPP2R2A (ENSCSAG00000016060) #21 ENSCSAG00000016062 #22 ENSCSAG00000016068 #22 CDCA2 (ENSCSAG00000016076) #23 ENSCSAG00000016100 ##24 GNRH1 (ENSCSAG00000016109) #25 DOCK5 (ENSCSAG00000016128) #26 NEFL (ENSCSAG00000016132) #27 NEFM (ENSCSAG00000016135) #28 ADAM7 (ENSCSAG00000016187) #29 ADAMDEC1 (ENSCSAG00000016207) #30 ADAM28 (ENSCSAG00000016220) #31 STC1 (ENSCSAG00000016224) #32 NKX2-6 (ENSCSAG00000016228) #33 NKX3-1 (ENSCSAG00000016229) #34 SLC25A37 (ENSCSAG00000016232) #35 ENTPD4 (ENSCSAG00000016236) #37 Vervet Monkey MODERN SPECIES 27 ESCO2 (ENSCSAG00000015966) CCDC25 (ENSCSAG00000015972) ##7 SCARA3 (ENSCSAG00000015975) #8 CLU (ENSCSAG00000015978) #9 EPHX2 (ENSCSAG00000015986) #10 CHRNA2 (ENSCSAG00000015995) #11 PTK2B (ENSCSAG00000016005) #12 TRIM35 (ENSCSAG00000016014) #13 STMN4 (ENSCSAG00000016018) #14 ADRA1A (ENSCSAG00000016022) #16 DPYSL2 (ENSCSAG00000016049) #18 PNMA2 (ENSCSAG00000018524) BNIP3L (ENSCSAG00000016055) #20 PPP2R2A (ENSCSAG00000016060) #21 ENSCSAG00000016062 #22 ENSCSAG00000016068 #22 CDCA2 (ENSCSAG00000016076) #23 ENSCSAG00000016100 ##24 GNRH1 (ENSCSAG00000016109) #25 DOCK5 (ENSCSAG00000016128) #26 NEFL (ENSCSAG00000016132) #27 NEFM (ENSCSAG00000016135) #28 ADAM7 (ENSCSAG00000016187) #29 ADAMDEC1 (ENSCSAG00000016207) #30 ADAM28 (ENSCSAG00000016220) #31 STC1 (ENSCSAG00000016224) #32 NKX2-6 (ENSCSAG00000016228) #33 NKX3-1 (ENSCSAG00000016229) #34 SLC25A37 (ENSCSAG00000016232) #35 ENTPD4 (ENSCSAG00000016236) #37 LOXL2 (ENSCSAG00000016241) Cercopithecinae_a ANCESTRAL SPECIES 15 ENSGT00940000158598 ENSGT00390000004380.m.a.b #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00390000010355.r ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314.k.b.a ##24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00910000147586 ENSGT00940000156208 #27 ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00910000147038 ENSGT00940000158607 #35 Macaca ANCESTRAL SPECIES 14 ENSGT00940000158598 ENSGT00390000004380.m.a.b #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00390000010355.r ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314.k.b.a ##24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00910000147586 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00910000147038 Pig-tailed macaque MODERN SPECIES 579 SCARA3 (ENSMNEG00000037952) #8 CLU (ENSMNEG00000043022) #9 EPHX2 (ENSMNEG00000031898) #10 CHRNA2 (ENSMNEG00000036009) #11 PTK2B (ENSMNEG00000032809) #12 TRIM35 (ENSMNEG00000033062) #13 STMN4 (ENSMNEG00000042099) #14 ADRA1A (ENSMNEG00000032467) #16 DPYSL2 (ENSMNEG00000031797) #18 ENSMNEG00000040560 PNMA2 (ENSMNEG00000021767) BNIP3L (ENSMNEG00000032945) #20 ENSMNEG00000039270 PPP2R2A (ENSMNEG00000023471) #21 ENSMNEG00000010649 EBF2 (ENSMNEG00000040606) #22 ENSMNEG00000035457 CDCA2 (ENSMNEG00000036287) #23 KCTD9 (ENSMNEG00000044328) ##24 GNRH1 (ENSMNEG00000042496) #25 DOCK5 (ENSMNEG00000043546) #26 ENSMNEG00000022002 NEFL (ENSMNEG00000039854) #27 NEFM (ENSMNEG00000028916) #28 ADAM7 (ENSMNEG00000041516) #29 ADAMDEC1 (ENSMNEG00000027019) #30 ADAM28 (ENSMNEG00000035956) #31 STC1 (ENSMNEG00000044899) #32 NKX2-6 (ENSMNEG00000029977) #33 NKX3-1 (ENSMNEG00000029607) #34 SLC25A37 (ENSMNEG00000033209) #35 Macaca_a ANCESTRAL SPECIES 16 ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380.m.a.b #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314.k.b.a ##24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 Crab-eating macaque MODERN SPECIES 18 ESCO2 (ENSMFAG00000044655) ENSMFAG00000035835 #7 SCARA3 (ENSMFAG00000026741) #8 CLU (ENSMFAG00000041649) #9 EPHX2 (ENSMFAG00000036427) #10 CHRNA2 (ENSMFAG00000003637) #11 PTK2B (ENSMFAG00000003719) #12 TRIM35 (ENSMFAG00000035683) #13 ENSMFAG00000054931 STMN4 (ENSMFAG00000032113) #14 ADRA1A (ENSMFAG00000030813) #16 DPYSL2 (ENSMFAG00000005287) #18 PNMA2 (ENSMFAG00000000029) BNIP3L (ENSMFAG00000003324) #20 PPP2R2A (ENSMFAG00000045160) #21 EBF2 (ENSMFAG00000036796) #22 CDCA2 (ENSMFAG00000044937) #23 KCTD9 (ENSMFAG00000000476) #24 GNRH1 (ENSMFAG00000052417) #25 DOCK5 (ENSMFAG00000001732) #26 NEFL (ENSMFAG00000031550) #27 ENSMFAG00000044080 ENSMFAG00000057085 ADAM7 (ENSMFAG00000045244) #29 ADAMDEC1 (ENSMFAG00000007172) #30 ADAM28 (ENSMFAG00000039137) #31 STC1 (ENSMFAG00000060775) #32 NKX2-6 (ENSMFAG00000040141) #33 NKX3-1 (ENSMFAG00000047611) #34 SLC25A37 (ENSMFAG00000027746) #35 ENTPD4 (ENSMFAG00000037815) #37 Rhesus MODERN SPECIES 18 CCDC25 (ENSMMUG00000016016) #7 ENSMMUG00000056404 SCARA3 (ENSMMUG00000021517) #8 CLU (ENSMMUG00000021516) #9 EPHX2 (ENSMMUG00000021515) #10 CHRNA2 (ENSMMUG00000021514) #11 PTK2B (ENSMMUG00000019159) #12 TRIM35 (ENSMMUG00000010092) #13 STMN4 (ENSMMUG00000018670) #14 ADRA1A (ENSMMUG00000023112) #16 ENSMMUG00000055650 DPYSL2 (ENSMMUG00000012718) #18 PNMA2 (ENSMMUG00000042420) BNIP3L (ENSMMUG00000023646) #20 PPP2R2A (ENSMMUG00000041905) #21 EBF2 (ENSMMUG00000005760) #22 CDCA2 (ENSMMUG00000010582) #23 KCTD9 (ENSMMUG00000010151) ##24 GNRH1 (ENSMMUG00000029018) #25 DOCK5 (ENSMMUG00000008028) #26 NEFL (ENSMMUG00000003348) #27 NEFM (ENSMMUG00000000639) #28 ENSMMUG00000058642 ENSMMUG00000054167 ADAM7 (ENSMMUG00000007909) #29 ADAMDEC1 (ENSMMUG00000005318) #30 ADAM28 (ENSMMUG00000005317) #31 STC1 (ENSMMUG00000046186) #32 NKX2-6 (ENSMMUG00000020863) #33 NKX3-1 (ENSMMUG00000009796) #34 ENSMMUG00000064526 Cercopithecinae_b ANCESTRAL SPECIES 9 ENSGT00940000158598 ENSGT00390000004380.m.a.b #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00390000010355.r ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314.k.b.a ##24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00910000147586 ENSGT00940000156208 #27 ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00910000147038 ENSGT00940000158607 #35 Olive baboon MODERN SPECIES 18 SCARA5 (ENSPANG00000021266) PBK (ENSPANG00000024523) ESCO2 (ENSPANG00000008112) ENSPANG00000012552 #7 SCARA3 (ENSPANG00000016907) #8 CLU (ENSPANG00000024524) #9 EPHX2 (ENSPANG00000001096) #10 CHRNA2 (ENSPANG00000015733) #11 PTK2B (ENSPANG00000019189) #12 TRIM35 (ENSPANG00000017759) #13 STMN4 (ENSPANG00000007322) #14 ADRA1A (ENSPANG00000024527) #16 DPYSL2 (ENSPANG00000024528) #18 PNMA2 (ENSPANG00000007854) ENSPANG00000048024 EBF2 (ENSPANG00000020231) #22 CDCA2 (ENSPANG00000008115) #23 KCTD9 (ENSPANG00000019100) ##24 DOCK5 (ENSPANG00000005750) #26 NEFL (ENSPANG00000011988) #27 NEFM (ENSPANG00000018460) #28 ENSPANG00000038971 ENSPANG00000030915 ADAM7 (ENSPANG00000017131) #29 ADAMDEC1 (ENSPANG00000022045) #30 ADAM28 (ENSPANG00000005176) #31 ENSPANG00000005177 STC1 (ENSPANG00000048289) #32 NKX2-6 (ENSPANG00000019014) #33 NKX3-1 (ENSPANG00000004934) #34 SLC25A37 (ENSPANG00000000653) #35 Cercopithecinae_d ANCESTRAL SPECIES 50 ENSGT00390000004380.m.a.b #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00390000010355.r ENSGT00390000012635.a.b ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314.k.b.a ##24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00910000147586 ENSGT00940000156208 #27 ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00910000147038 ENSGT00940000158607 #35 Drill MODERN SPECIES 879 ENSMLEG00000029491 #7 SCARA3 (ENSMLEG00000035030) #8 CLU (ENSMLEG00000035141) #9 EPHX2 (ENSMLEG00000029411) #10 CHRNA2 (ENSMLEG00000029000) #11 PTK2B (ENSMLEG00000030832) #12 TRIM35 (ENSMLEG00000030731) #13 STMN4 (ENSMLEG00000037742) #14 ADRA1A (ENSMLEG00000043053) #16 DPYSL2 (ENSMLEG00000042022) #18 PNMA2 (ENSMLEG00000010554) BNIP3L (ENSMLEG00000041439) #20 ENSMLEG00000037027 ENSMLEG00000037332 PPP2R2A (ENSMLEG00000040846) #21 EBF2 (ENSMLEG00000035290) #22 Sooty mangabey MODERN SPECIES 555 ENSCATG00000033671 #7 SCARA3 (ENSCATG00000037167) #8 CLU (ENSCATG00000009271) #9 EPHX2 (ENSCATG00000029846) #10 CHRNA2 (ENSCATG00000031746) #11 PTK2B (ENSCATG00000032885) #12 TRIM35 (ENSCATG00000032262) #13 STMN4 (ENSCATG00000022939) #14 ADRA1A (ENSCATG00000045125) #16 DPYSL2 (ENSCATG00000034654) #18 PNMA2 (ENSCATG00000017448) BNIP3L (ENSCATG00000036601) #20 ENSCATG00000045185 ENSCATG00000045206 PPP2R2A (ENSCATG00000037089) #21 EBF2 (ENSCATG00000039203) #22 CDCA2 (ENSCATG00000031991) #23 KCTD9 (ENSCATG00000038906) ##24 GNRH1 (ENSCATG00000041582) #25 DOCK5 (ENSCATG00000043562) #26 ENSCATG00000030152 NEFL (ENSCATG00000042551) #27 NEFM (ENSCATG00000042530) #28 ADAM7 (ENSCATG00000041478) #29 ADAMDEC1 (ENSCATG00000043054) #30 ADAM28 (ENSCATG00000043598) #31 STC1 (ENSCATG00000026956) #32 NKX2-6 (ENSCATG00000045337) #33 NKX3-1 (ENSCATG00000008649) #34 SLC25A37 (ENSCATG00000035944) #35 ENSCATG00000035953 Rhinopithecus ANCESTRAL SPECIES 55 ENSGT00390000004380.m.a.b #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00960000186788 ENSGT00390000013415.a.b #20 ENSGT00390000010355.r ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314.k.b.b.a ##24 ENSGT00940000154314.k.b.a ##24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00910000147038 ENSGT00940000158607 #35 Golden snub-nosed monkey MODERN SPECIES 2058 ENSRROG00000028567 #7 SCARA3 (ENSRROG00000041739) #8 CLU (ENSRROG00000040828) #9 EPHX2 (ENSRROG00000027951) #10 CHRNA2 (ENSRROG00000032763) #11 PTK2B (ENSRROG00000042745) #12 TRIM35 (ENSRROG00000030715) #13 STMN4 (ENSRROG00000042832) #14 ADRA1A (ENSRROG00000041301) #16 DPYSL2 (ENSRROG00000040914) #18 PNMA2 (ENSRROG00000020262) ENSRROG00000036299 BNIP3L (ENSRROG00000031724) #20 ENSRROG00000038154 PPP2R2A (ENSRROG00000041692) #21 EBF2 (ENSRROG00000034779) #22 CDCA2 (ENSRROG00000035636) #23 KCTD9 (ENSRROG00000032392) ##24 GNRH1 (ENSRROG00000043250) #25 DOCK5 (ENSRROG00000028212) #26 NEFL (ENSRROG00000037096) #27 NEFM (ENSRROG00000023277) #28 Black snub-nosed monkey MODERN SPECIES 98 ENSRBIG00000043704 #7 SCARA3 (ENSRBIG00000043052) #8 CLU (ENSRBIG00000030449) #9 EPHX2 (ENSRBIG00000044411) #10 CHRNA2 (ENSRBIG00000030777) #11 PTK2B (ENSRBIG00000030703) #12 TRIM35 (ENSRBIG00000038938) #13 STMN4 (ENSRBIG00000039520) #14 ADRA1A (ENSRBIG00000043723) #16 DPYSL2 (ENSRBIG00000038509) #18 PNMA2 (ENSRBIG00000016543) ENSRBIG00000006170 BNIP3L (ENSRBIG00000043157) #20 ENSRBIG00000031494 PPP2R2A (ENSRBIG00000028497) #21 EBF2 (ENSRBIG00000011662) #22 ENSRBIG00000026024 CDCA2 (ENSRBIG00000039250) #23 ENSRBIG00000044540 ##24 GNRH1 (ENSRBIG00000042433) #25 DOCK5 (ENSRBIG00000022198) #26 NEFL (ENSRBIG00000033397) #27 NEFM (ENSRBIG00000044501) #28 ADAM7 (ENSRBIG00000022906) #29 ADAMDEC1 (ENSRBIG00000032045) #30 ADAM28 (ENSRBIG00000020078) #31 STC1 (ENSRBIG00000032107) #32 NKX2-6 (ENSRBIG00000041260) #33 NKX3-1 (ENSRBIG00000023436) #34 SLC25A37 (ENSRBIG00000032128) #35 ENSRBIG00000038195 Hominoidea ANCESTRAL SPECIES 14 ENSGT00940000158598 ENSGT00390000004380.m.b.a ##7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00960000186788 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314.k.b.a ##24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 Hominidae ANCESTRAL SPECIES 15 ENSGT00940000158598 ENSGT00390000004380.m.b.a ##7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00960000186788 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314.k.b.a ##24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00550000076401 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 Homo/Pan/Gorilla group ANCESTRAL SPECIES 13 ENSGT00390000004380.m.b.a ##7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00960000186788 ENSGT00390000013415.a.b #20 ENSGT00390000010355.q.b ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314.k.b.a ##24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00550000076401 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 Homo/Pan group ANCESTRAL SPECIES 12 ENSGT00390000004380.m.b.a ##7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00960000186788 ENSGT00390000013415.a.b #20 ENSGT00390000010355.q.b ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314.l #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00550000076401 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 Pan ANCESTRAL SPECIES 30 ENSGT00390000004380.m.b.a ##7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00960000186788 ENSGT00390000013415.a.b #20 ENSGT00390000010355.q.b ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314.l #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00550000076401 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 Chimpanzee MODERN SPECIES 21 SCARA3 (ENSPTRG00000020108) #8 CLU (ENSPTRG00000020107) #9 EPHX2 (ENSPTRG00000020106) #10 CHRNA2 (ENSPTRG00000020105) #11 PTK2B (ENSPTRG00000020104) #12 TRIM35 (ENSPTRG00000020103) #13 STMN4 (ENSPTRG00000020102) #14 ENSPTRG00000045362 ADRA1A (ENSPTRG00000020100) #16 DPYSL2 (ENSPTRG00000020099) #18 PNMA2 (ENSPTRG00000051035) ENSPTRG00000051226 BNIP3L (ENSPTRG00000020097) #20 ENSPTRG00000047485 PPP2R2A (ENSPTRG00000042450) #21 EBF2 (ENSPTRG00000003058) #22 CDCA2 (ENSPTRG00000020094) #23 KCTD9 (ENSPTRG00000020092) #24 GNRH1 (ENSPTRG00000020091) #25 DOCK5 (ENSPTRG00000020090) #26 NEFL (ENSPTRG00000045792) #27 NEFM (ENSPTRG00000020087) #28 ADAM7 (ENSPTRG00000020086) #29 ADAMDEC1 (ENSPTRG00000020085) #30 ADAM28 (ENSPTRG00000020084) #31 STC1 (ENSPTRG00000020083) #32 NKX2-6 (ENSPTRG00000020082) #33 NKX3-1 (ENSPTRG00000020081) #34 ENSPTRG00000052642 ENSPTRG00000042744 SLC25A37 (ENSPTRG00000020079) #35 Bonobo MODERN SPECIES 21 CCDC25 (ENSPPAG00000035057) ##7 SCARA3 (ENSPPAG00000031092) #8 CLU (ENSPPAG00000030389) #9 EPHX2 (ENSPPAG00000034443) #10 CHRNA2 (ENSPPAG00000042024) #11 PTK2B (ENSPPAG00000037974) #12 TRIM35 (ENSPPAG00000038841) #13 ENSPPAG00000043385 #14 ADRA1A (ENSPPAG00000043804) #16 DPYSL2 (ENSPPAG00000035831) #18 PNMA2 (ENSPPAG00000033170) ENSPPAG00000040176 BNIP3L (ENSPPAG00000036943) #20 ENSPPAG00000033286 PPP2R2A (ENSPPAG00000035123) #21 EBF2 (ENSPPAG00000030675) #22 CDCA2 (ENSPPAG00000033215) #23 ENSPPAG00000030819 #24 GNRH1 (ENSPPAG00000028067) #25 DOCK5 (ENSPPAG00000040985) #26 NEFL (ENSPPAG00000039333) #27 NEFM (ENSPPAG00000029966) #28 ADAM7 (ENSPPAG00000042630) #29 ADAMDEC1 (ENSPPAG00000038047) #30 ADAM28 (ENSPPAG00000035327) #31 STC1 (ENSPPAG00000029446) #32 NKX2-6 (ENSPPAG00000027939) #33 NKX3-1 (ENSPPAG00000027435) #34 ENSPPAG00000033094 SLC25A37 (ENSPPAG00000018748) #35 ENSPPAG00000033689 Human MODERN SPECIES 20 PBK (ENSG00000168078) ESCO2 (ENSG00000171320) CCDC25 (ENSG00000147419) ##7 SCARA3 (ENSG00000168077) #8 CLU (ENSG00000120885) #9 EPHX2 (ENSG00000120915) #10 CHRNA2 (ENSG00000120903) #11 PTK2B (ENSG00000120899) #12 TRIM35 (ENSG00000104228) #13 STMN4 (ENSG00000015592) #14 ADRA1A (ENSG00000120907) #16 DPYSL2 (ENSG00000092964) #18 PNMA2 (ENSG00000240694) BNIP3L (ENSG00000104765) #20 PPP2R2A (ENSG00000221914) #21 EBF2 (ENSG00000221818) #22 CDCA2 (ENSG00000184661) #23 KCTD9 (ENSG00000104756) ##24 GNRH1 (ENSG00000147437) #25 DOCK5 (ENSG00000147459) #26 NEFL (ENSG00000277586) #27 NEFM (ENSG00000104722) #28 ADAM7 (ENSG00000069206) #29 ADAMDEC1 (ENSG00000134028) #30 ADAM28 (ENSG00000042980) #31 STC1 (ENSG00000159167) #32 NKX2-6 (ENSG00000180053) #33 NKX3-1 (ENSG00000167034) #34 SLC25A37 (ENSG00000147454) #35 ENTPD4 (ENSG00000197217) #37 LOXL2 (ENSG00000134013) Gorilla MODERN SPECIES 21 CCDC25 (ENSGGOG00000009685) ##7 ENSGGOG00000004099 #8 CLU (ENSGGOG00000016926) #9 EPHX2 (ENSGGOG00000016993) #10 CHRNA2 (ENSGGOG00000015596) #11 PTK2B (ENSGGOG00000015589) #12 ENSGGOG00000010652 #13 ENSGGOG00000003341 #14 ADRA1A (ENSGGOG00000000511) #16 DPYSL2 (ENSGGOG00000000194) #18 PNMA2 (ENSGGOG00000043329) ENSGGOG00000038243 BNIP3L (ENSGGOG00000041240) #20 ENSGGOG00000027436 PPP2R2A (ENSGGOG00000011500) #21 EBF2 (ENSGGOG00000001585) #22 CDCA2 (ENSGGOG00000022784) #23 KCTD9 (ENSGGOG00000004480) ##24 GNRH1 (ENSGGOG00000004479) #25 DOCK5 (ENSGGOG00000004460) #26 NEFL (ENSGGOG00000001429) #27 NEFM (ENSGGOG00000009880) #28 ADAM7 (ENSGGOG00000001012) #29 ADAMDEC1 (ENSGGOG00000001215) #30 ADAM28 (ENSGGOG00000017021) #31 STC1 (ENSGGOG00000026322) #32 NKX2-6 (ENSGGOG00000014372) #33 NKX3-1 (ENSGGOG00000041851) #34 ENSGGOG00000027906 SLC25A37 (ENSGGOG00000005025) #35 ENTPD4 (ENSGGOG00000010428) #37 Orangutan MODERN SPECIES 21 ESCO2 (ENSPPYG00000018469) CCDC25 (ENSPPYG00000018468) SCARA3 (ENSPPYG00000018467) #8 CLU (ENSPPYG00000018466) #9 EPHX2 (ENSPPYG00000018465) #10 CHRNA2 (ENSPPYG00000018464) #11 PTK2B (ENSPPYG00000018462) #12 TRIM35 (ENSPPYG00000018461) #13 STMN4 (ENSPPYG00000018460) #14 ADRA1A (ENSPPYG00000018459) #16 DPYSL2 (ENSPPYG00000018458) #18 PNMA2 (ENSPPYG00000018457) ENSPPYG00000033464 BNIP3L (ENSPPYG00000038394) #20 PPP2R2A (ENSPPYG00000018455) #21 EBF2 (ENSPPYG00000018454) #22 CDCA2 (ENSPPYG00000018453) #23 KCTD9 (ENSPPYG00000018452) ##24 GNRH1 (ENSPPYG00000018451) #25 DOCK5 (ENSPPYG00000031126) #26 ENSPPYG00000033175 NEFL (ENSPPYG00000018449) #27 NEFM (ENSPPYG00000018448) #28 ADAM7 (ENSPPYG00000018447) #29 ADAMDEC1 (ENSPPYG00000018446) #30 ADAM28 (ENSPPYG00000018445) #31 STC1 (ENSPPYG00000018444) #32 NKX2-6 (ENSPPYG00000018443) #33 NKX3-1 (ENSPPYG00000018442) #34 ENSPPYG00000031644 ENSPPYG00000018439 Gibbon MODERN SPECIES 23 PBK (ENSNLEG00000016542) ESCO2 (ENSNLEG00000016527) ENSNLEG00000016507 #7 SCARA3 (ENSNLEG00000016505) #8 CLU (ENSNLEG00000016366) #9 EPHX2 (ENSNLEG00000016316) #10 CHRNA2 (ENSNLEG00000016309) #11 PTK2B (ENSNLEG00000016291) #12 TRIM35 (ENSNLEG00000016281) #13 STMN4 (ENSNLEG00000031885) #14 ADRA1A (ENSNLEG00000016272) #16 DPYSL2 (ENSNLEG00000016244) #18 PNMA2 (ENSNLEG00000019079) BNIP3L (ENSNLEG00000016221) #20 PPP2R2A (ENSNLEG00000028888) #21 EBF2 (ENSNLEG00000016189) #22 CDCA2 (ENSNLEG00000016169) #23 KCTD9 (ENSNLEG00000016156) ##24 GNRH1 (ENSNLEG00000032497) #25 DOCK5 (ENSNLEG00000016075) #26 NEFL (ENSNLEG00000016066) #27 ENSNLEG00000016060 ADAM7 (ENSNLEG00000016022) #29 ADAMDEC1 (ENSNLEG00000015990) #30 ADAM28 (ENSNLEG00000015981) #31 STC1 (ENSNLEG00000015971) #32 NKX2-6 (ENSNLEG00000015970) #33 NKX3-1 (ENSNLEG00000030037) #34 ENSNLEG00000029971 ENSNLEG00000035146 #36 SLC25A37 (ENSNLEG00000015964) #35 Tarsier MODERN SPECIES 5964 EBF2 (ENSTSYG00000019489) #22 CDCA2 (ENSTSYG00000005048) #23 KCTD9 (ENSTSYG00000014586) #24 GNRH1 (ENSTSYG00000014585) #25 ENSTSYG00000034892 #26 Strepsirrhini ANCESTRAL SPECIES 25 ENSGT00940000158598 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 Lemuriformes DUPLICATION Lemuriformes ANCESTRAL SPECIES 32 ENSGT00940000158598 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b.e #22 ENSGT00950000182859.A.a.a.b.f #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 Lemuriformes_a ANCESTRAL SPECIES 34 ENSGT00940000158598 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b.e #22 ENSGT00950000182859.A.a.a.b.f #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 Coquerels sifaka MODERN SPECIES 919 PBK (ENSPCOG00000018801) ESCO2 (ENSPCOG00000021572) CCDC25 (ENSPCOG00000005370) #7 SCARA3 (ENSPCOG00000017002) #8 CLU (ENSPCOG00000009703) #9 ENSPCOG00000020409 EPHX2 (ENSPCOG00000027937) #10 CHRNA2 (ENSPCOG00000019897) #11 PTK2B (ENSPCOG00000026528) #12 TRIM35 (ENSPCOG00000016334) #13 STMN4 (ENSPCOG00000028776) #14 ADRA1A (ENSPCOG00000028770) #16 DPYSL2 (ENSPCOG00000027797) #18 BNIP3L (ENSPCOG00000026018) #20 PPP2R2A (ENSPCOG00000023269) #21 EBF2 (ENSPCOG00000027078) #22 CDCA2 (ENSPCOG00000023393) #23 KCTD9 (ENSPCOG00000020414) #24 GNRH1 (ENSPCOG00000024165) #25 DOCK5 (ENSPCOG00000016268) #26 NEFL (ENSPCOG00000026085) #27 NEFM (ENSPCOG00000022965) #28 ADAM7 (ENSPCOG00000026532) #29 ENSPCOG00000021910 #31 ENSPCOG00000008142 STC1 (ENSPCOG00000019531) #32 ENSPCOG00000026813 NKX2-6 (ENSPCOG00000021761) #33 NKX3-1 (ENSPCOG00000024990) #34 SLC25A37 (ENSPCOG00000028846) #35 ENTPD4 (ENSPCOG00000010184) #37 Mouse lemur MODERN SPECIES 12 ESCO2 (ENSMICG00000029625) CCDC25 (ENSMICG00000042632) #7 SCARA3 (ENSMICG00000035553) #8 CLU (ENSMICG00000007720) #9 ENSMICG00000028711 ENSMICG00000007709 #10 CHRNA2 (ENSMICG00000007702) #11 PTK2B (ENSMICG00000007677) #12 TRIM35 (ENSMICG00000038500) #13 STMN4 (ENSMICG00000012281) #14 ENSMICG00000026774 ADRA1A (ENSMICG00000015812) #16 DPYSL2 (ENSMICG00000015794) #18 BNIP3L (ENSMICG00000015781) #20 PPP2R2A (ENSMICG00000034854) #21 ENSMICG00000030813 #22 ENSMICG00000043737 ENSMICG00000015774 #22 CDCA2 (ENSMICG00000031889) #23 KCTD9 (ENSMICG00000016754) #24 GNRH1 (ENSMICG00000037976) #25 DOCK5 (ENSMICG00000016726) #26 NEFL (ENSMICG00000030432) #27 ENSMICG00000036167 ADAM7 (ENSMICG00000002694) #29 ADAMDEC1 (ENSMICG00000047490) #30 ENSMICG00000034192 ADAM28 (ENSMICG00000042341) #31 STC1 (ENSMICG00000032857) #32 NKX2-6 (ENSMICG00000042062) #33 NKX3-1 (ENSMICG00000011189) #34 Lemuriformes ANCESTRAL SPECIES 32 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b.e #22 ENSGT00950000182859.A.a.a.b.f #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 Lemuriformes_a ANCESTRAL SPECIES 34 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b.e #22 ENSGT00950000182859.A.a.a.b.f #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 Greater bamboo lemur MODERN SPECIES 236 ESCO2 (ENSPSMG00000011084) CCDC25 (ENSPSMG00000011072) #7 SCARA3 (ENSPSMG00000011055) #8 CLU (ENSPSMG00000011031) #9 ENSPSMG00000011018 EPHX2 (ENSPSMG00000010900) #10 CHRNA2 (ENSPSMG00000010720) #11 PTK2B (ENSPSMG00000010424) #12 TRIM35 (ENSPSMG00000010142) #13 STMN4 (ENSPSMG00000010113) #14 ADRA1A (ENSPSMG00000010078) #16 DPYSL2 (ENSPSMG00000009959) #18 PNMA2 (ENSPSMG00000009835) BNIP3L (ENSPSMG00000009825) #20 PPP2R2A (ENSPSMG00000009553) #21 EBF2 (ENSPSMG00000009327) #22 CDCA2 (ENSPSMG00000009257) #23 KCTD9 (ENSPSMG00000009241) #24 GNRH1 (ENSPSMG00000009210) #25 ENSPSMG00000009203 Mouse lemur MODERN SPECIES 12 SCARA3 (ENSMICG00000035553) #8 CLU (ENSMICG00000007720) #9 ENSMICG00000028711 ENSMICG00000007709 #10 CHRNA2 (ENSMICG00000007702) #11 PTK2B (ENSMICG00000007677) #12 TRIM35 (ENSMICG00000038500) #13 STMN4 (ENSMICG00000012281) #14 ENSMICG00000026774 ADRA1A (ENSMICG00000015812) #16 DPYSL2 (ENSMICG00000015794) #18 BNIP3L (ENSMICG00000015781) #20 PPP2R2A (ENSMICG00000034854) #21 ENSMICG00000030813 #22 ENSMICG00000043737 ENSMICG00000015774 #22 CDCA2 (ENSMICG00000031889) #23 KCTD9 (ENSMICG00000016754) #24 GNRH1 (ENSMICG00000037976) #25 DOCK5 (ENSMICG00000016726) #26 NEFL (ENSMICG00000030432) #27 ENSMICG00000036167 ADAM7 (ENSMICG00000002694) #29 ADAMDEC1 (ENSMICG00000047490) #30 ENSMICG00000034192 ADAM28 (ENSMICG00000042341) #31 STC1 (ENSMICG00000032857) #32 NKX2-6 (ENSMICG00000042062) #33 NKX3-1 (ENSMICG00000011189) #34 SLC25A37 (ENSMICG00000034841) #35 ENTPD4 (ENSMICG00000011165) #37 Bushbaby MODERN SPECIES 189 ESCO2 (ENSOGAG00000011834) CCDC25 (ENSOGAG00000011829) #7 SCARA3 (ENSOGAG00000031170) #8 CLU (ENSOGAG00000030580) #9 ENSOGAG00000026271 EPHX2 (ENSOGAG00000003192) #10 CHRNA2 (ENSOGAG00000033591) #11 PTK2B (ENSOGAG00000003185) #12 TRIM35 (ENSOGAG00000027382) #13 STMN4 (ENSOGAG00000010549) #14 ADRA1A (ENSOGAG00000026801) #16 DPYSL2 (ENSOGAG00000011250) #18 PNMA2 (ENSOGAG00000011246) BNIP3L (ENSOGAG00000003163) #20 PPP2R2A (ENSOGAG00000034741) #21 EBF2 (ENSOGAG00000010783) #22 CDCA2 (ENSOGAG00000002970) #23 KCTD9 (ENSOGAG00000002969) #24 GNRH1 (ENSOGAG00000016753) #25 DOCK5 (ENSOGAG00000002967) #26 NEFL (ENSOGAG00000015179) #27 ENSOGAG00000026104 ADAM7 (ENSOGAG00000015171) #29 ADAMDEC1 (ENSOGAG00000015169) #30 ADAM28 (ENSOGAG00000015163) #31 STC1 (ENSOGAG00000010809) #32 NKX2-6 (ENSOGAG00000026099) #33 NKX3-1 (ENSOGAG00000001303) #34 SLC25A37 (ENSOGAG00000001295) #35 ENTPD4 (ENSOGAG00000001293) #37 LOXL2 (ENSOGAG00000001292) Euarchontoglires_A ANCESTRAL SPECIES 25 ENSGT00940000158598 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT00940000172945 ENSGT01100000263540.B.d #37 Glires ANCESTRAL SPECIES 26 ENSGT00950000185466 ENSGT00940000158598 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT00940000172945 ENSGT01100000263540.B.d #37 Lagomorpha ANCESTRAL SPECIES 60 ENSGT00950000183074.B.a.a ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 Rabbit MODERN SPECIES 11 SCARA3 (ENSOCUG00000009918) #8 CLU (ENSOCUG00000005985) #9 ENSOCUG00000024474 ADAM2 (ENSOCUG00000006251) CHRNA2 (ENSOCUG00000007679) #11 PTK2B (ENSOCUG00000007668) #12 TRIM35 (ENSOCUG00000007658) #13 STMN4 (ENSOCUG00000007652) #14 ENSOCUG00000038802 ADRA1A (ENSOCUG00000000775) #16 ENSOCUG00000033215 DPYSL2 (ENSOCUG00000016002) #18 ENSOCUG00000033577 BNIP3L (ENSOCUG00000010542) #20 PPP2R2A (ENSOCUG00000027088) #21 EBF2 (ENSOCUG00000011972) #22 CDCA2 (ENSOCUG00000014109) #23 KCTD9 (ENSOCUG00000014099) #24 GNRH1 (ENSOCUG00000014093) #25 DOCK5 (ENSOCUG00000014056) #26 NEFL (ENSOCUG00000023836) #27 ENSOCUG00000021430 ADAM7 (ENSOCUG00000012104) #29 ADAMDEC1 (ENSOCUG00000001597) #30 ADAM28 (ENSOCUG00000004176) #31 ENSOCUG00000032289 ENSOCUG00000037834 ENSOCUG00000033833 STC1 (ENSOCUG00000005708) #32 NKX2-6 (ENSOCUG00000004296) #33 NKX3-1 (ENSOCUG00000004294) #34 Pika MODERN SPECIES 1234 ENSOPRG00000003599 #22 Rodentia ANCESTRAL SPECIES 21 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000161961 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT00940000172945 ENSGT01100000263540.B.d #37 Rodentia_B ANCESTRAL SPECIES 24 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000161961 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b.p #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 Kangaroo rat MODERN SPECIES 506 Adra1a (ENSDORG00000005782) #16 Dpysl2 (ENSDORG00000023604) #18 Pnma2 (ENSDORG00000009340) Bnip3l (ENSDORG00000028719) #20 Ppp2r2a (ENSDORG00000019723) #21 Ebf2 (ENSDORG00000019864) #22 ENSDORG00000007254 #23 Kctd9 (ENSDORG00000007253) #24 Gnrh1 (ENSDORG00000007251) #25 Dock5 (ENSDORG00000012003) #26 Nefl (ENSDORG00000025560) #27 ENSDORG00000027287 Adam7 (ENSDORG00000007281) #29 Adamdec1 (ENSDORG00000007279) #30 Adam28 (ENSDORG00000001473) #31 Stc1 (ENSDORG00000023767) #32 ENSDORG00000024859 #34 Slc25a37 (ENSDORG00000026005) #35 ENSDORG00000008983 #37 Loxl2 (ENSDORG00000011153) R3hcc1 (ENSDORG00000026365) Myomorpha ANCESTRAL SPECIES 29 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000161961 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b.p #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 Muroidea ANCESTRAL SPECIES 26 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000161961 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b.p #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 Muroidea_A ANCESTRAL SPECIES 10 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000161961 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00860000136257 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b.p #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT00940000163436.n.a ENSGT01100000263540.B.d #37 Cricetidae ANCESTRAL SPECIES 15 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000161961 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00860000136257 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b.p #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT00940000163436.n.a ENSGT01100000263540.B.d #37 Cricetinae ANCESTRAL SPECIES 18 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000161961 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00860000136257 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b.p #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT00940000163436.n.a ENSGT01100000263540.B.d #37 Chinese hamster chok1gshd MODERN SPECIES 3 Gulo (ENSCGRG00001019987) Adam2 (ENSCGRG00001012300) Ephx2 (ENSCGRG00001003555) #10 ENSCGRG00001003198 Chrna2 (ENSCGRG00001025060) #11 Ptk2b (ENSCGRG00001013042) #12 Trim35 (ENSCGRG00001019610) #13 ENSCGRG00001009280 Stmn4 (ENSCGRG00001008937) #14 Adra1a (ENSCGRG00001023093) #16 Dpysl2 (ENSCGRG00001016379) #18 ENSCGRG00001010421 Pnma2 (ENSCGRG00001010753) Bnip3l (ENSCGRG00001021504) #20 Ppp2r2a (ENSCGRG00001015307) #21 Ebf2 (ENSCGRG00001001432) #22 Cdca2 (ENSCGRG00001022349) #23 Kctd9 (ENSCGRG00001022797) #24 Gnrh1 (ENSCGRG00001000327) #25 Dock5 (ENSCGRG00001021195) #26 Nefl (ENSCGRG00001016408) #27 ENSCGRG00001011263 #28 Adam7 (ENSCGRG00001010547) #29 Adamdec1 (ENSCGRG00001013228) #30 Adam28 (ENSCGRG00001009338) #31 Stc1 (ENSCGRG00001019183) #32 Nkx2-6 (ENSCGRG00001007878) #33 Nkx3-1 (ENSCGRG00001019912) #34 Slc25a37 (ENSCGRG00001008508) #35 Synb (ENSCGRG00001011259) ENSCGRG00001018845 #37 Golden Hamster MODERN SPECIES 670 Ccdc25 (ENSMAUG00000018478) #7 Scara3 (ENSMAUG00000008370) #8 Clu (ENSMAUG00000001027) #9 Gulo (ENSMAUG00000013257) Adam2 (ENSMAUG00000021964) Ephx2 (ENSMAUG00000010745) #10 Chrna2 (ENSMAUG00000009044) #11 Ptk2b (ENSMAUG00000018808) #12 Trim35 (ENSMAUG00000010808) #13 Stmn4 (ENSMAUG00000012567) #14 Adra1a (ENSMAUG00000019248) #16 Dpysl2 (ENSMAUG00000006007) #18 ENSMAUG00000020770 Bnip3l (ENSMAUG00000007015) #20 Ppp2r2a (ENSMAUG00000019855) #21 Ebf2 (ENSMAUG00000015832) #22 Cdca2 (ENSMAUG00000011109) #23 Kctd9 (ENSMAUG00000012597) #24 Gnrh1 (ENSMAUG00000008244) #25 Dock5 (ENSMAUG00000008971) #26 ENSMAUG00000005425 #27 ENSMAUG00000017900 #28 Cricetidae_B ANCESTRAL SPECIES 11 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000161961 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00860000136257 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b.p #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT00940000163436.n.a Prairie vole MODERN SPECIES 4 Clu (ENSMOCG00000014457) #9 Gulo (ENSMOCG00000017457) Adam2 (ENSMOCG00000013262) Ephx2 (ENSMOCG00000022783) #10 Chrna2 (ENSMOCG00000019567) #11 Ptk2b (ENSMOCG00000004454) #12 Trim35 (ENSMOCG00000021886) #13 Stmn4 (ENSMOCG00000015586) #14 Adra1a (ENSMOCG00000018438) #16 Dpysl2 (ENSMOCG00000016303) #18 ENSMOCG00000006051 Pnma2 (ENSMOCG00000003712) ENSMOCG00000018617 #20 Ppp2r2a (ENSMOCG00000011317) #21 ENSMOCG00000005189 Ebf2 (ENSMOCG00000007295) #22 Cdca2 (ENSMOCG00000002388) #23 Kctd9 (ENSMOCG00000016913) #24 Gnrh1 (ENSMOCG00000003491) #25 Dock5 (ENSMOCG00000009188) #26 Nefl (ENSMOCG00000012988) #27 ENSMOCG00000009013 #28 Adam7 (ENSMOCG00000022709) #29 Adamdec1 (ENSMOCG00000021493) #30 Adam28 (ENSMOCG00000010153) #31 Stc1 (ENSMOCG00000003351) #32 Nkx2-6 (ENSMOCG00000002130) #33 Nkx3-1 (ENSMOCG00000001078) #34 Slc25a37 (ENSMOCG00000000710) #35 Synb (ENSMOCG00000018779) ENSMOCG00000021822 #37 Northern American deer mouse MODERN SPECIES 22 Ccdc25 (ENSPEMG00000021280) #7 Scara3 (ENSPEMG00000021066) #8 Clu (ENSPEMG00000021652) #9 Gulo (ENSPEMG00000021556) Adam2 (ENSPEMG00000021163) Ephx2 (ENSPEMG00000023642) #10 Chrna2 (ENSPEMG00000023959) #11 Ptk2b (ENSPEMG00000017057) #12 Trim35 (ENSPEMG00000030578) #13 Stmn4 (ENSPEMG00000021636) #14 Adra1a (ENSPEMG00000021686) #16 Dpysl2 (ENSPEMG00000021785) #18 Pnma2 (ENSPEMG00000025483) ENSPEMG00000023103 #20 Ppp2r2a (ENSPEMG00000022593) #21 Ebf2 (ENSPEMG00000007776) #22 Cdca2 (ENSPEMG00000021129) #23 Kctd9 (ENSPEMG00000020895) #24 Gnrh1 (ENSPEMG00000030807) #25 Dock5 (ENSPEMG00000023361) #26 Nefl (ENSPEMG00000020765) #27 Nefm (ENSPEMG00000020646) Adam7 (ENSPEMG00000012803) #29 Adamdec1 (ENSPEMG00000004402) #30 Adam28 (ENSPEMG00000015520) #31 ENSPEMG00000030090 ENSPEMG00000027026 Stc1 (ENSPEMG00000027424) #32 Nkx2-6 (ENSPEMG00000005851) #33 Nkx3-1 (ENSPEMG00000026785) #34 Slc25a37 (ENSPEMG00000017275) #35 Murinae ANCESTRAL SPECIES 16 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000161961 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00860000136257 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b.p #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT00940000163436.n.a ENSGT01100000263540.B.d #37 Mus ANCESTRAL SPECIES 8 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000161961 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00860000136257 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b.p #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT00940000163436.n.a ENSGT01100000263540.B.d #37 Mus_A ANCESTRAL SPECIES 12 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000161961 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT00860000136174 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00860000136257 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b.p #20 ENSGT00950000182864.a.b.a.y #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT00940000163436.n.a ENSGT01100000263540.B.d #37 Mus_B ANCESTRAL SPECIES 11 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000161961 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT00860000136174 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00860000136257 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b.p #20 ENSGT00950000182864.a.b.a.y #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT00940000163436.n.a ENSGT01100000263540.B.d #37 Mouse MODERN SPECIES 5 Ccdc25 (ENSMUSG00000022035) #7 Scara3 (ENSMUSG00000034463) #8 Clu (ENSMUSG00000022037) #9 Gulo (ENSMUSG00000034450) Adam2 (ENSMUSG00000022039) Ephx2 (ENSMUSG00000022040) #10 Chrna2 (ENSMUSG00000022041) #11 Ptk2b (ENSMUSG00000059456) #12 Trim35 (ENSMUSG00000022043) #13 Stmn4 (ENSMUSG00000022044) #14 Adra1a (ENSMUSG00000045875) #16 Dpysl2 (ENSMUSG00000022048) #18 Pnma2 (ENSMUSG00000046204) Bnip3l (ENSMUSG00000022051) #20 Ppp2r2a (ENSMUSG00000022052) #21 Ebf2 (ENSMUSG00000022053) #22 Cdca2 (ENSMUSG00000048922) #23 Kctd9 (ENSMUSG00000034327) #24 Gnrh1 (ENSMUSG00000015812) #25 Dock5 (ENSMUSG00000044447) #26 Nefm (ENSMUSG00000022054) Nefl (ENSMUSG00000022055) #27 Adam7 (ENSMUSG00000022056) #29 Adamdec1 (ENSMUSG00000022057) #30 Adam28 (ENSMUSG00000014725) #31 Stc1 (ENSMUSG00000014813) #32 Nkx2-6 (ENSMUSG00000044186) #33 Nkx3-1 (ENSMUSG00000022061) #34 Slc25a37 (ENSMUSG00000034248) #35 Synb (ENSMUSG00000047977) Entpd4 (ENSMUSG00000095463) #37 Mus_C ANCESTRAL SPECIES 20 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000161961 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT00860000136174 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00860000136257 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b.p #20 ENSGT00950000182864.a.b.a.y #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT00940000163436.n.a Steppe mouse MODERN SPECIES 3151 ENSMSIG00000018158 Clu (ENSMSIG00000018167) #9 Gulo (ENSMSIG00000018184) Adam2 (ENSMSIG00000018204) Ephx2 (ENSMSIG00000018278) #10 Chrna2 (ENSMSIG00000018435) #11 Ptk2b (ENSMSIG00000018459) #12 Trim35 (ENSMSIG00000018652) #13 Stmn4 (ENSMSIG00000018673) #14 Adra1a (ENSMSIG00000018756) #16 Dpysl2 (ENSMSIG00000018782) #18 ENSMSIG00000018813 Pnma2 (ENSMSIG00000018820) Bnip3l (ENSMSIG00000018832) #20 Ppp2r2a (ENSMSIG00000018898) #21 Ebf2 (ENSMSIG00000019023) #22 ENSMSIG00000019073 ENSMSIG00000019082 spretus MODERN SPECIES 5 Clu (MGP_SPRETEiJ_G0020324) #9 Gulo (MGP_SPRETEiJ_G0020325) Adam2 (MGP_SPRETEiJ_G0020326) Ephx2 (MGP_SPRETEiJ_G0020327) #10 Chrna2 (MGP_SPRETEiJ_G0020328) #11 Ptk2b (MGP_SPRETEiJ_G0020329) #12 Trim35 (MGP_SPRETEiJ_G0020330) #13 Stmn4 (MGP_SPRETEiJ_G0020331) #14 Adra1a (MGP_SPRETEiJ_G0020332) #16 MGP_SPRETEiJ_G0020333 Dpysl2 (MGP_SPRETEiJ_G0020334) #18 MGP_SPRETEiJ_G0020335 Pnma2 (MGP_SPRETEiJ_G0020336) Bnip3l (MGP_SPRETEiJ_G0020337) #20 Ppp2r2a (MGP_SPRETEiJ_G0020338) #21 Ebf2 (MGP_SPRETEiJ_G0020339) #22 Cdca2 (MGP_SPRETEiJ_G0020340) #23 Kctd9 (MGP_SPRETEiJ_G0020341) #24 Gnrh1 (MGP_SPRETEiJ_G0020342) #25 Dock5 (MGP_SPRETEiJ_G0020343) #26 Nefm (MGP_SPRETEiJ_G0020344) Nefl (MGP_SPRETEiJ_G0020345) #27 Adam7 (MGP_SPRETEiJ_G0020346) #29 Adamdec1 (MGP_SPRETEiJ_G0020347) #30 Adam28 (MGP_SPRETEiJ_G0020348) #31 Stc1 (MGP_SPRETEiJ_G0020349) #32 Nkx2-6 (MGP_SPRETEiJ_G0020350) #33 Nkx3-1 (MGP_SPRETEiJ_G0020351) #34 Slc25a37 (MGP_SPRETEiJ_G0020352) #35 MGP_SPRETEiJ_G0020354 MGP_SPRETEiJ_G0020355 Ryukyu mouse MODERN SPECIES 5 Clu (MGP_CAROLIEiJ_G0019432) #9 Gulo (MGP_CAROLIEiJ_G0019433) Adam2 (MGP_CAROLIEiJ_G0019434) Ephx2 (MGP_CAROLIEiJ_G0019435) #10 Chrna2 (MGP_CAROLIEiJ_G0019436) #11 Ptk2b (MGP_CAROLIEiJ_G0019437) #12 Trim35 (MGP_CAROLIEiJ_G0019438) #13 Stmn4 (MGP_CAROLIEiJ_G0019439) #14 Adra1a (MGP_CAROLIEiJ_G0019440) #16 MGP_CAROLIEiJ_G0019441 Dpysl2 (MGP_CAROLIEiJ_G0019442) #18 MGP_CAROLIEiJ_G0019443 Pnma2 (MGP_CAROLIEiJ_G0019444) Bnip3l (MGP_CAROLIEiJ_G0019445) #20 MGP_CAROLIEiJ_G0019446 #21 Ebf2 (MGP_CAROLIEiJ_G0019447) #22 Cdca2 (MGP_CAROLIEiJ_G0019448) #23 Kctd9 (MGP_CAROLIEiJ_G0019449) #24 Gnrh1 (MGP_CAROLIEiJ_G0019450) #25 Dock5 (MGP_CAROLIEiJ_G0019451) #26 Nefm (MGP_CAROLIEiJ_G0019452) Nefl (MGP_CAROLIEiJ_G0019453) #27 Adam7 (MGP_CAROLIEiJ_G0019454) #29 Adamdec1 (MGP_CAROLIEiJ_G0019455) #30 Adam28 (MGP_CAROLIEiJ_G0019456) #31 Stc1 (MGP_CAROLIEiJ_G0019457) #32 Nkx2-6 (MGP_CAROLIEiJ_G0019458) #33 Nkx3-1 (MGP_CAROLIEiJ_G0019459) #34 Slc25a37 (MGP_CAROLIEiJ_G0019460) #35 MGP_CAROLIEiJ_G0019461 MGP_CAROLIEiJ_G0019462 Shrew mouse MODERN SPECIES 21 Ccdc25 (MGP_PahariEiJ_G0030448) #7 Scara3 (MGP_PahariEiJ_G0030449) #8 Clu (MGP_PahariEiJ_G0030450) #9 Gulo (MGP_PahariEiJ_G0030451) Adam2 (MGP_PahariEiJ_G0030452) Ephx2 (MGP_PahariEiJ_G0030453) #10 Chrna2 (MGP_PahariEiJ_G0030454) #11 Ptk2b (MGP_PahariEiJ_G0030455) #12 Trim35 (MGP_PahariEiJ_G0030456) #13 Stmn4 (MGP_PahariEiJ_G0030457) #14 Adra1a (MGP_PahariEiJ_G0030458) #16 Dpysl2 (MGP_PahariEiJ_G0030459) #18 MGP_PahariEiJ_G0030460 Bnip3l (MGP_PahariEiJ_G0030462) #20 Ppp2r2a (MGP_PahariEiJ_G0030463) #21 Ebf2 (MGP_PahariEiJ_G0030464) #22 Cdca2 (MGP_PahariEiJ_G0030465) #23 Kctd9 (MGP_PahariEiJ_G0030466) #24 Gnrh1 (MGP_PahariEiJ_G0030467) #25 Dock5 (MGP_PahariEiJ_G0030468) #26 Nefm (MGP_PahariEiJ_G0030469) Nefl (MGP_PahariEiJ_G0030470) #27 Adam7 (MGP_PahariEiJ_G0030471) #29 Adamdec1 (MGP_PahariEiJ_G0030472) #30 Adam28 (MGP_PahariEiJ_G0030473) #31 Stc1 (MGP_PahariEiJ_G0030474) #32 MGP_PahariEiJ_G0030475 #33 Nkx3-1 (MGP_PahariEiJ_G0030476) #34 Slc25a37 (MGP_PahariEiJ_G0030477) #35 MGP_PahariEiJ_G0030478 MGP_PahariEiJ_G0030479 Rat MODERN SPECIES 6 Ccdc25 (ENSRNOG00000015939) #7 Scara3 (ENSRNOG00000016177) #8 Clu (ENSRNOG00000016460) #9 Gulo (ENSRNOG00000016648) Adam2 (ENSRNOG00000017027) Ephx2 (ENSRNOG00000017286) #10 Chrna2 (ENSRNOG00000017424) #11 Ptk2b (ENSRNOG00000027839) #12 Trim35 (ENSRNOG00000009449) #13 Stmn4 (ENSRNOG00000053334) #14 Adra1a (ENSRNOG00000009522) #16 Dpysl2 (ENSRNOG00000009625) #18 Pnma2 (ENSRNOG00000009815) Bnip3l (ENSRNOG00000009820) #20 Ppp2r2a (ENSRNOG00000011158) #21 Ebf2 (ENSRNOG00000011548) #22 Cdca2 (ENSRNOG00000025302) #23 Gnrh1 (ENSRNOG00000066847) #25 Kctd9 (ENSRNOG00000012951) #24 Gnrh1 (ENSRNOG00000013433) Dock5 (ENSRNOG00000024703) #26 LOC120097172 (ENSRNOG00000031532) Nefl (ENSRNOG00000013658) #27 Nefm (ENSRNOG00000013916) #28 Adam7 (ENSRNOG00000014054) #29 Adamdec1 (ENSRNOG00000030724) #30 Adam28 (ENSRNOG00000014518) #31 ENSRNOG00000063586 #31 AABR07018269.1 (ENSRNOG00000031720) ENSRNOG00000063939 ENSRNOG00000067366 Upper Galilee mountains blind mole rat MODERN SPECIES 739 Adra1a (ENSNGAG00000013950) #16 Dpysl2 (ENSNGAG00000024011) #18 ENSNGAG00000022123 #20 Ppp2r2a (ENSNGAG00000023568) #21 Ebf2 (ENSNGAG00000019824) #22 Cdca2 (ENSNGAG00000015418) #23 Kctd9 (ENSNGAG00000023863) #24 Gnrh1 (ENSNGAG00000018104) #25 Dock5 (ENSNGAG00000023947) #26 ENSNGAG00000022190 ENSNGAG00000021748 Lesser Egyptian jerboa MODERN SPECIES 125 ENSJJAG00000016351 #7 Scara3 (ENSJJAG00000015535) #8 Clu (ENSJJAG00000011133) #9 Gulo (ENSJJAG00000008997) Adam2 (ENSJJAG00000021729) Ephx2 (ENSJJAG00000021412) #10 Chrna2 (ENSJJAG00000018111) #11 Ptk2b (ENSJJAG00000013115) #12 Trim35 (ENSJJAG00000011832) #13 ENSJJAG00000011170 Stmn4 (ENSJJAG00000010283) #14 Adra1a (ENSJJAG00000008597) #16 Dpysl2 (ENSJJAG00000021965) #18 ENSJJAG00000021430 #20 Ppp2r2a (ENSJJAG00000020800) #21 Ebf2 (ENSJJAG00000018635) #22 ENSJJAG00000016051 #23 Kctd9 (ENSJJAG00000014248) #24 Gnrh1 (ENSJJAG00000013753) #25 Dock5 (ENSJJAG00000012658) #26 Nefl (ENSJJAG00000011034) #27 Nefm (ENSJJAG00000018709) Adam7 (ENSJJAG00000016655) #29 Adamdec1 (ENSJJAG00000015285) #30 Adam28 (ENSJJAG00000014433) #31 Stc1 (ENSJJAG00000013494) #32 Nkx2-6 (ENSJJAG00000013412) #33 Nkx3-1 (ENSJJAG00000013332) #34 ENSJJAG00000012211 Slc25a37 (ENSJJAG00000012106) #35 ENSJJAG00000010447 #37 Rodentia_A ANCESTRAL SPECIES 21 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000161961 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT00940000172945 ENSGT01100000263540.B.d #37 Sciuridae ANCESTRAL SPECIES 29 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000161961 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314.j #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 Marmotini ANCESTRAL SPECIES 30 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000161961 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314.j #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00940000159453.e.b ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 Marmotini_b ANCESTRAL SPECIES 241 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314.j #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a Arctic ground squirrel MODERN SPECIES 498 PNMA2 (ENSUPAG00010022624) BNIP3L (ENSUPAG00010022623) #20 PPP2R2A (ENSUPAG00010022619) #21 EBF2 (ENSUPAG00010022616) #22 CDCA2 (ENSUPAG00010022612) #23 KCTD9 (ENSUPAG00010022608) #24 GNRH1 (ENSUPAG00010022605) #25 DOCK5 (ENSUPAG00010022602) #26 Squirrel MODERN SPECIES 357 ADRA1A (ENSSTOG00000019888) #16 DPYSL2 (ENSSTOG00000004052) #18 BNIP3L (ENSSTOG00000004029) #20 PPP2R2A (ENSSTOG00000023339) #21 EBF2 (ENSSTOG00000007966) #22 CDCA2 (ENSSTOG00000008812) #23 KCTD9 (ENSSTOG00000008797) #24 GNRH1 (ENSSTOG00000008794) #25 DOCK5 (ENSSTOG00000008718) #26 NEFL (ENSSTOG00000019640) #27 NEFM (ENSSTOG00000019862) #28 Alpin marmot MODERN SPECIES 61 SCARA3 (ENSMMMG00000013090) #8 CLU (ENSMMMG00000013091) #9 ENSMMMG00000013102 ADAM2 (ENSMMMG00000013126) EPHX2 (ENSMMMG00000013154) #10 ENSMMMG00000013222 #11 PTK2B (ENSMMMG00000013250) #12 ENSMMMG00000013471 #13 STMN4 (ENSMMMG00000013482) #14 ADRA1A (ENSMMMG00000013560) #16 DPYSL2 (ENSMMMG00000013573) #18 PNMA2 (ENSMMMG00000013583) BNIP3L (ENSMMMG00000013590) #20 PPP2R2A (ENSMMMG00000013593) #21 ENSMMMG00000013633 EBF2 (ENSMMMG00000013647) #22 ENSMMMG00000013653 CDCA2 (ENSMMMG00000013660) #23 KCTD9 (ENSMMMG00000013722) #24 ENSMMMG00000013769 GNRH1 (ENSMMMG00000013776) #25 DOCK5 (ENSMMMG00000013783) #26 ENSMMMG00000013835 NEFL (ENSMMMG00000013840) #27 ENSMMMG00000013849 ADAM7 (ENSMMMG00000013881) #29 ADAMDEC1 (ENSMMMG00000013904) #30 ADAM28 (ENSMMMG00000013926) #31 ENSMMMG00000013954 STC1 (ENSMMMG00000013958) #32 NKX2-6 (ENSMMMG00000013962) #33 Eurasian red squirrel MODERN SPECIES 14 CLU (ENSSVLG00005002257) #9 ENSSVLG00005002289 ADAM2 (ENSSVLG00005002341) EPHX2 (ENSSVLG00005002467) #10 CHRNA2 (ENSSVLG00005002577) #11 PTK2B (ENSSVLG00005002627) #12 ENSSVLG00005002776 TRIM35 (ENSSVLG00005002788) #13 STMN4 (ENSSVLG00005002831) #14 ZFP57 (ENSSVLG00005002906) ADRA1A (ENSSVLG00005002931) #16 DPYSL2 (ENSSVLG00005002961) #18 PNMA2 (ENSSVLG00005003028) ENSSVLG00005003040 #20 ENSSVLG00005003080 #21 EBF2 (ENSSVLG00005003172) #22 CDCA2 (ENSSVLG00005003275) #23 KCTD9 (ENSSVLG00005003331) #24 GNRH1 (ENSSVLG00005003367) #25 DOCK5 (ENSSVLG00005003397) #26 ENSSVLG00005003428 ENSSVLG00005003443 NEFL (ENSSVLG00005003461) #27 NEFM (ENSSVLG00005003494) #28 ADAM7 (ENSSVLG00005003562) #29 ADAMDEC1 (ENSSVLG00005003660) #30 ADAM28 (ENSSVLG00005003701) #31 STC1 (ENSSVLG00005003730) #32 NKX2-6 (ENSSVLG00005003752) #33 NKX3-1 (ENSSVLG00005003772) #34 SLC25A37 (ENSSVLG00005003790) #35 Hystricomorpha ANCESTRAL SPECIES 21 ENSGT00940000158598 ENSGT00390000004380.p #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000161961 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT00940000172945 ENSGT01100000263540.B.d #37 Naked mole-rat female MODERN SPECIES 25 EPHX2 (ENSHGLG00000005581) #10 CHRNA2 (ENSHGLG00000004833) #11 PTK2B (ENSHGLG00000015272) #12 TRIM35 (ENSHGLG00000034100) #13 STMN4 (ENSHGLG00000016773) #14 ENSHGLG00000045878 ADRA1A (ENSHGLG00000009186) #16 ENSHGLG00000048177 ENSHGLG00000046165 DPYSL2 (ENSHGLG00000005797) #18 PNMA2 (ENSHGLG00000045190) ENSHGLG00000044794 BNIP3L (ENSHGLG00000041171) #20 ENSHGLG00000009150 #21 ENSHGLG00000045544 ENSHGLG00000004897 #22 ENSHGLG00000010256 CDCA2 (ENSHGLG00000037894) #23 ENSHGLG00000036572 ENSHGLG00000018824 #24 GNRH1 (ENSHGLG00000017902) #25 DOCK5 (ENSHGLG00000017514) #26 ENSHGLG00000050046 NEFL (ENSHGLG00000017653) #27 ENSHGLG00000019352 ENSHGLG00000036278 ADAM7 (ENSHGLG00000017673) #29 ADAMDEC1 (ENSHGLG00000011872) #30 ADAM28 (ENSHGLG00000018858) #31 ENSHGLG00000040240 STC1 (ENSHGLG00000040196) #32 Hystricomorpha_a ANCESTRAL SPECIES 20 ENSGT00940000158598 ENSGT00390000004380.p #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000161961 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 Guinea pig MODERN SPECIES 1 PBK (ENSCPOG00000010826) ESCO2 (ENSCPOG00000024189) CCDC25 (ENSCPOG00000038303) #7 SCARA3 (ENSCPOG00000034540) #8 CLU (ENSCPOG00000019546) #9 ADAM2 (ENSCPOG00000022133) EPHX2 (ENSCPOG00000037609) #10 CHRNA2 (ENSCPOG00000038123) #11 PTK2B (ENSCPOG00000004602) #12 TRIM35 (ENSCPOG00000032287) #13 STMN4 (ENSCPOG00000005528) #14 ADRA1A (ENSCPOG00000038399) #16 DPYSL2 (ENSCPOG00000025679) #18 BNIP3L (ENSCPOG00000034680) #20 PPP2R2A (ENSCPOG00000026784) #21 EBF2 (ENSCPOG00000001463) #22 CDCA2 (ENSCPOG00000036890) #23 KCTD9 (ENSCPOG00000015540) #24 GNRH1 (ENSCPOG00000015538) #25 DOCK5 (ENSCPOG00000015533) #26 NEFL (ENSCPOG00000023838) #27 ENSCPOG00000027410 ADAM7 (ENSCPOG00000001538) #29 ADAMDEC1 (ENSCPOG00000038140) #30 ADAM28 (ENSCPOG00000009707) #31 STC1 (ENSCPOG00000034351) #32 NKX3-1 (ENSCPOG00000040229) #34 SLC25A37 (ENSCPOG00000035237) #35 ENTPD4 (ENSCPOG00000009705) #37 LOXL2 (ENSCPOG00000009701) R3HCC1 (ENSCPOG00000009696) Hystricomorpha_b ANCESTRAL SPECIES 30 ENSGT00940000158598 ENSGT00390000004380.p #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000161961 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 Degu MODERN SPECIES 77 CLU (ENSODEG00000007758) #9 ENSODEG00000012794 ADAM2 (ENSODEG00000008302) EPHX2 (ENSODEG00000007405) #10 CHRNA2 (ENSODEG00000008004) #11 PTK2B (ENSODEG00000009950) #12 TRIM35 (ENSODEG00000008434) #13 STMN4 (ENSODEG00000006658) #14 ENSODEG00000010902 ADRA1A (ENSODEG00000007554) #16 DPYSL2 (ENSODEG00000007667) #18 ENSODEG00000007526 ENSODEG00000007362 #20 ENSODEG00000006781 #21 ENSODEG00000007854 EBF2 (ENSODEG00000007640) #22 ENSODEG00000006905 ENSODEG00000007418 #23 KCTD9 (ENSODEG00000008616) #24 GNRH1 (ENSODEG00000007834) #25 DOCK5 (ENSODEG00000007523) #26 NEFL (ENSODEG00000007183) #27 NEFM (ENSODEG00000008392) #28 ENSODEG00000007521 ADAM7 (ENSODEG00000007547) #29 ADAMDEC1 (ENSODEG00000008034) #30 ADAM28 (ENSODEG00000007875) #31 STC1 (ENSODEG00000007382) #32 NKX2-6 (ENSODEG00000007413) #33 NKX3-1 (ENSODEG00000007004) #34 SLC25A37 (ENSODEG00000007363) #35 Long-tailed chinchilla MODERN SPECIES 110 ESCO2 (ENSCLAG00000017015) CCDC25 (ENSCLAG00000013927) #7 SCARA3 (ENSCLAG00000016246) #8 CLU (ENSCLAG00000014457) #9 ENSCLAG00000014336 ADAM2 (ENSCLAG00000014916) EPHX2 (ENSCLAG00000014569) #10 CHRNA2 (ENSCLAG00000016813) #11 PTK2B (ENSCLAG00000015285) #12 TRIM35 (ENSCLAG00000014327) #13 STMN4 (ENSCLAG00000014584) #14 ADRA1A (ENSCLAG00000014689) #16 DPYSL2 (ENSCLAG00000015960) #18 BNIP3L (ENSCLAG00000016223) #20 PPP2R2A (ENSCLAG00000013984) #21 EBF2 (ENSCLAG00000013500) #22 CDCA2 (ENSCLAG00000011981) #23 KCTD9 (ENSCLAG00000013948) #24 GNRH1 (ENSCLAG00000014234) #25 DOCK5 (ENSCLAG00000015174) #26 NEFL (ENSCLAG00000014935) #27 ENSCLAG00000013799 ADAM7 (ENSCLAG00000013174) #29 ENSCLAG00000015375 #30 ADAM28 (ENSCLAG00000016310) #31 ENSCLAG00000015807 STC1 (ENSCLAG00000014786) #32 NKX2-6 (ENSCLAG00000014720) #33 NKX3-1 (ENSCLAG00000013957) #34 SLC25A37 (ENSCLAG00000014235) #35 ENTPD4 (ENSCLAG00000013899) #37 Laurasiatheria ANCESTRAL SPECIES 24 ENSGT00950000185082 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 Eulipotyphla ANCESTRAL SPECIES ENSGT00950000182859.A.a.a.b #22 Common shrew MODERN SPECIES 2280 EBF2 (ENSSARG00000012320) #22 Laurasiatheria_a ANCESTRAL SPECIES 8 ENSGT00950000185082 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00990000214190 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 Artiodactyla ANCESTRAL SPECIES 7 ENSGT00950000185082 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00990000214190 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 Suina ANCESTRAL SPECIES 42 ENSGT00950000185082 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 Chacoan peccary MODERN SPECIES 813 ESCO2 (ENSCWAG00000009108) CCDC25 (ENSCWAG00000009241) #7 SCARA3 (ENSCWAG00000009341) #8 CLU (ENSCWAG00000009499) #9 ENSCWAG00000009543 EPHX2 (ENSCWAG00000009691) #10 CHRNA2 (ENSCWAG00000010830) #11 PTK2B (ENSCWAG00000011805) #12 TRIM35 (ENSCWAG00000011889) #13 STMN4 (ENSCWAG00000011950) #14 ADRA1A (ENSCWAG00000012091) #16 DPYSL2 (ENSCWAG00000012142) #18 PNMA2 (ENSCWAG00000012323) BNIP3L (ENSCWAG00000012345) #20 PPP2R2A (ENSCWAG00000012404) #21 EBF2 (ENSCWAG00000012599) #22 CDCA2 (ENSCWAG00000012969) #23 KCTD9 (ENSCWAG00000013249) #24 GNRH1 (ENSCWAG00000013307) #25 DOCK5 (ENSCWAG00000013368) #26 NEFL (ENSCWAG00000013873) #27 ENSCWAG00000013920 ADAM7 (ENSCWAG00000013998) #29 ADAMDEC1 (ENSCWAG00000014486) #30 ADAM28 (ENSCWAG00000014725) #31 STC1 (ENSCWAG00000014909) #32 NKX2-6 (ENSCWAG00000014986) #33 NKX3-1 (ENSCWAG00000015012) #34 SLC25A37 (ENSCWAG00000015044) #35 ENTPD4 (ENSCWAG00000015072) #37 LOXL2 (ENSCWAG00000015127) Pig MODERN SPECIES 5 ENSSSCG00000050594 CCDC25 (ENSSSCG00000024972) #7 SCARA3 (ENSSSCG00000020846) #8 CLU (ENSSSCG00000009668) #9 ENSSSCG00000009667 EPHX2 (ENSSSCG00000009666) #10 CHRNA2 (ENSSSCG00000009665) #11 PTK2B (ENSSSCG00000009664) #12 TRIM35 (ENSSSCG00000033325) #13 STMN4 (ENSSSCG00000009662) #14 ADRA1A (ENSSSCG00000009661) #16 DPYSL2 (ENSSSCG00000030130) #18 PNMA2 (ENSSSCG00000009659) BNIP3L (ENSSSCG00000009658) #20 PPP2R2A (ENSSSCG00000009657) #21 EBF2 (ENSSSCG00000009655) #22 ENSSSCG00000042774 CDCA2 (ENSSSCG00000009653) #23 KCTD9 (ENSSSCG00000009652) #24 GNRH1 (ENSSSCG00000009651) #25 DOCK5 (ENSSSCG00000009650) #26 NEFL (ENSSSCG00000009649) #27 ENSSSCG00000009648 ENSSSCG00000060373 ENSSSCG00000057307 ADAM7 (ENSSSCG00000009646) #29 ADAMDEC1 (ENSSSCG00000009645) #30 ADAM28 (ENSSSCG00000009644) #31 STC1 (ENSSSCG00000009642) #32 NKX2-6 (ENSSSCG00000028064) #33 NKX3-1 (ENSSSCG00000031924) #34 Artiodactyla_a ANCESTRAL SPECIES 6 ENSGT00940000158598 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00990000214190 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 Camelidae ANCESTRAL SPECIES 47 ENSGT00940000158598 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 ENSGT00530000063711.a ENSGT00720000108860 Alpaca MODERN SPECIES 2917 BNIP3L (ENSVPAG00000000509) #20 PPP2R2A (ENSVPAG00000015429) #21 EBF2 (ENSVPAG00000015422) #22 Arabian camel MODERN SPECIES 24 SCARA3 (ENSCDRG00005019603) #8 CLU (ENSCDRG00005019585) #9 ENSCDRG00005019569 EPHX2 (ENSCDRG00005019465) #10 CHRNA2 (ENSCDRG00005019402) #11 PTK2B (ENSCDRG00005019294) #12 TRIM35 (ENSCDRG00005019253) #13 STMN4 (ENSCDRG00005019200) #14 ENSCDRG00005019174 ADRA1A (ENSCDRG00005019146) #16 DPYSL2 (ENSCDRG00005018995) #18 PNMA2 (ENSCDRG00005018959) BNIP3L (ENSCDRG00005018890) #20 PPP2R2A (ENSCDRG00005018721) #21 ENSCDRG00005018693 EBF2 (ENSCDRG00005018634) #22 CDCA2 (ENSCDRG00005018503) #23 KCTD9 (ENSCDRG00005018455) #24 GNRH1 (ENSCDRG00005018431) #25 DOCK5 (ENSCDRG00005018165) #26 NEFL (ENSCDRG00005018138) #27 ENSCDRG00005018075 ADAM7 (ENSCDRG00005017257) #29 ADAM28 (ENSCDRG00005016471) #31 STC1 (ENSCDRG00005016415) #32 ENSCDRG00005016389 #33 NKX3-1 (ENSCDRG00005016364) #34 SLC25A37 (ENSCDRG00005016317) #35 ENTPD4 (ENSCDRG00005016214) #37 LOXL2 (ENSCDRG00005016177) R3HCC1 (ENSCDRG00005016059) Artiodactyla_b ANCESTRAL SPECIES 7 ENSGT00940000158598 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00990000214190 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 Cetacea ANCESTRAL SPECIES 9 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00390000006350.m.a.c.b.a.b ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 Odontoceti ANCESTRAL SPECIES 8 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00390000006350.m.a.c.b.a.b ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 Odontoceti_a ANCESTRAL SPECIES 15 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00390000006350.m.a.c.b.a.b ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 Odontoceti_b ANCESTRAL SPECIES 8 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00390000006350.m.a.c.b.a.b ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000183010.a.b.a.a.a.a.a.b.b.d ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 Monodontidae ANCESTRAL SPECIES 5 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00390000006350.m.a.c.b.a.b ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000183010.a.b.a.a.a.a.a.b.b.d ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01010000228881 ENSGT01100000263540.B.d #37 Narwhal MODERN SPECIES 312 SCARA3 (ENSMMNG00015017508) #8 CLU (ENSMMNG00015017554) #9 ENSMMNG00015017581 EPHX2 (ENSMMNG00015017668) #10 ENSMMNG00015017835 CHRNA2 (ENSMMNG00015017861) #11 PTK2B (ENSMMNG00015017976) #12 TRIM35 (ENSMMNG00015018089) #13 STMN4 (ENSMMNG00015018331) #14 ADRA1A (ENSMMNG00015018492) #16 DPYSL2 (ENSMMNG00015018544) #18 PNMA2 (ENSMMNG00015018639) BNIP3L (ENSMMNG00015018649) #20 PPP2R2A (ENSMMNG00015018714) #21 ENSMMNG00015018827 EBF2 (ENSMMNG00015018863) #22 CDCA2 (ENSMMNG00015018900) #23 KCTD9 (ENSMMNG00015019003) #24 GNRH1 (ENSMMNG00015019060) #25 DOCK5 (ENSMMNG00015019103) #26 NEFL (ENSMMNG00015019153) #27 ENSMMNG00015019196 ENSMMNG00015019249 #29 ADAMDEC1 (ENSMMNG00015019319) #30 ADAM28 (ENSMMNG00015019400) #31 STC1 (ENSMMNG00015019502) #32 NKX2-6 (ENSMMNG00015019533) #33 ENSMMNG00015019551 SLC25A37 (ENSMMNG00015019590) #35 ENSMMNG00015019603 ENSMMNG00015019619 Beluga whale MODERN SPECIES 4 SCARA3 (ENSDLEG00000000924) #8 CLU (ENSDLEG00000000957) #9 ENSDLEG00000000969 EPHX2 (ENSDLEG00000001005) #10 ENSDLEG00000001060 CHRNA2 (ENSDLEG00000001068) #11 PTK2B (ENSDLEG00000001086) #12 TRIM35 (ENSDLEG00000001119) #13 STMN4 (ENSDLEG00000001142) #14 ADRA1A (ENSDLEG00000001167) #16 DPYSL2 (ENSDLEG00000001186) #18 PNMA2 (ENSDLEG00000001239) BNIP3L (ENSDLEG00000001250) #20 PPP2R2A (ENSDLEG00000001272) #21 ENSDLEG00000001289 EBF2 (ENSDLEG00000001316) #22 ENSDLEG00000001380 CDCA2 (ENSDLEG00000001385) #23 KCTD9 (ENSDLEG00000001415) #24 GNRH1 (ENSDLEG00000001435) #25 DOCK5 (ENSDLEG00000002343) #26 ENSDLEG00000006462 NEFL (ENSDLEG00000006467) #27 NEFM (ENSDLEG00000006476) #28 ADAM28 (ENSDLEG00000006489) #31 STC1 (ENSDLEG00000006517) #32 ENSDLEG00000006522 #33 NKX3-1 (ENSDLEG00000006531) #34 SLC25A37 (ENSDLEG00000006540) #35 ENSDLEG00000006543 ENTPD4 (ENSDLEG00000006555) #37 Vaquita MODERN SPECIES 17 ESCO2 (ENSPSNG00000012224) CCDC25 (ENSPSNG00000012132) #7 SCARA3 (ENSPSNG00000011999) #8 CLU (ENSPSNG00000011914) #9 ENSPSNG00000011878 CHRNA2 (ENSPSNG00000011813) #11 PTK2B (ENSPSNG00000011703) #12 TRIM35 (ENSPSNG00000011632) #13 STMN4 (ENSPSNG00000011305) #14 ADRA1A (ENSPSNG00000011198) #16 DPYSL2 (ENSPSNG00000010930) #18 PNMA2 (ENSPSNG00000010857) BNIP3L (ENSPSNG00000010778) #20 PPP2R2A (ENSPSNG00000010594) #21 ENSPSNG00000010536 EBF2 (ENSPSNG00000010256) #22 ENSPSNG00000010228 ENSPSNG00000010183 CDCA2 (ENSPSNG00000009875) #23 KCTD9 (ENSPSNG00000009803) #24 GNRH1 (ENSPSNG00000004028) #25 ENSPSNG00000003996 ENSPSNG00000003965 NEFL (ENSPSNG00000003946) #27 ENSPSNG00000003914 ADAMDEC1 (ENSPSNG00000003873) #30 ADAM28 (ENSPSNG00000003790) #31 STC1 (ENSPSNG00000003726) #32 NKX2-6 (ENSPSNG00000003713) #33 NKX3-1 (ENSPSNG00000003693) #34 ENSPSNG00000003682 Dolphin MODERN SPECIES 2887 EBF2 (ENSTTRG00000021467) #22 Sperm whale MODERN SPECIES 20 PBK (ENSPCTG00005002003) ESCO2 (ENSPCTG00005001985) CCDC25 (ENSPCTG00005001956) #7 ENSPCTG00005001945 EPHX2 (ENSPCTG00005001921) #10 CHRNA2 (ENSPCTG00005001881) #11 PTK2B (ENSPCTG00005001853) #12 TRIM35 (ENSPCTG00005001833) #13 STMN4 (ENSPCTG00005001782) #14 ENSPCTG00005001739 ADRA1A (ENSPCTG00005001727) #16 DPYSL2 (ENSPCTG00005001664) #18 PNMA2 (ENSPCTG00005001626) BNIP3L (ENSPCTG00005001600) #20 PPP2R2A (ENSPCTG00005001540) #21 EBF2 (ENSPCTG00005001486) #22 ENSPCTG00005001468 CDCA2 (ENSPCTG00005001413) #23 KCTD9 (ENSPCTG00005001337) #24 GNRH1 (ENSPCTG00005001298) #25 DOCK5 (ENSPCTG00005001083) #26 NEFL (ENSPCTG00005001011) #27 NEFM (ENSPCTG00005000983) #28 ENSPCTG00005000957 ADAM7 (ENSPCTG00005000905) #29 ADAMDEC1 (ENSPCTG00005000843) #30 ADAM28 (ENSPCTG00005000741) #31 STC1 (ENSPCTG00005000557) #32 NKX2-6 (ENSPCTG00005000444) #33 NKX3-1 (ENSPCTG00005015538) #34 ENSPCTG00005015478 Blue whale MODERN SPECIES 17 CCDC25 (ENSBMSG00010000771) #7 SCARA3 (ENSBMSG00010000815) #8 CLU (ENSBMSG00010000855) #9 ENSBMSG00010000884 EPHX2 (ENSBMSG00010000918) #10 ENSBMSG00010000956 CHRNA2 (ENSBMSG00010000975) #11 PTK2B (ENSBMSG00010001018) #12 TRIM35 (ENSBMSG00010001057) #13 STMN4 (ENSBMSG00010001170) #14 ADRA1A (ENSBMSG00010001276) #16 DPYSL2 (ENSBMSG00010001313) #18 PNMA2 (ENSBMSG00010001359) ENSBMSG00010001374 #20 PPP2R2A (ENSBMSG00010001403) #21 EBF2 (ENSBMSG00010001470) #22 CDCA2 (ENSBMSG00010001504) #23 KCTD9 (ENSBMSG00010001525) #24 GNRH1 (ENSBMSG00010001589) #25 DOCK5 (ENSBMSG00010001626) #26 NEFL (ENSBMSG00010001677) #27 NEFM (ENSBMSG00010001692) #28 ENSBMSG00010001706 ENSBMSG00010001750 #29 ADAMDEC1 (ENSBMSG00010001768) #30 ENSBMSG00010001817 #31 STC1 (ENSBMSG00010001852) #32 NKX2-6 (ENSBMSG00010001859) #33 NKX3-1 (ENSBMSG00010001867) #34 SLC25A37 (ENSBMSG00010001881) #35 ENSBMSG00010001888 Pecora ANCESTRAL SPECIES 36 ENSGT00940000158598 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00990000214190 ENSGT00940000156208 #27 ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00940000154172.`b ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 Percora_a ANCESTRAL SPECIES 24 ENSGT00940000158598 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00990000214190 ENSGT00940000156208 #27 ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00940000154172.`b ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 Bovidae ANCESTRAL SPECIES 14 ENSGT00940000156806 ENSGT00530000063668.B.b #9 ENSGT00530000065109.h ENSGT00510000048121.j ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00990000214190 ENSGT00940000156208 #27 ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00940000154172.`b ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 Caprinae ANCESTRAL SPECIES 14 ENSGT00940000153558.b.i.b.a.a.h ENSGT00940000156806 ENSGT00530000063668.B.b #9 ENSGT00530000065109.h ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 Goat MODERN SPECIES 27 APTX (ENSCHIG00000012896) ENSCHIG00000020043 #9 ENSCHIG00000026235 ENSCHIG00000015473 ENSCHIG00000008405 EPHX2 (ENSCHIG00000007111) #10 CHRNA2 (ENSCHIG00000018927) #11 PTK2B (ENSCHIG00000026234) #12 TRIM35 (ENSCHIG00000009723) #13 STMN4 (ENSCHIG00000020412) #14 ADRA1A (ENSCHIG00000021001) #16 DPYSL2 (ENSCHIG00000026845) #18 PNMA2 (ENSCHIG00000002000) ENSCHIG00000024818 #20 PPP2R2A (ENSCHIG00000007473) #21 EBF2 (ENSCHIG00000023729) #22 CDCA2 (ENSCHIG00000018580) #23 KCTD9 (ENSCHIG00000015791) #24 GNRH1 (ENSCHIG00000016406) #25 DOCK5 (ENSCHIG00000001085) #26 NEFL (ENSCHIG00000011951) #27 NEFM (ENSCHIG00000019945) #28 ADAM7 (ENSCHIG00000015652) #29 ADAMDEC1 (ENSCHIG00000015701) #30 ADAM28 (ENSCHIG00000024308) #31 ENSCHIG00000012581 STC1 (ENSCHIG00000010708) #32 NKX2-6 (ENSCHIG00000023290) #33 NKX3-1 (ENSCHIG00000010463) #34 ENSCHIG00000009620 ENSCHIG00000010457 Rambouillet Sheep MODERN SPECIES 11 APTX (ENSOARG00020011077) ENSOARG00020011544 #9 ENSOARG00020011616 ENSOARG00020011644 EPHX2 (ENSOARG00020011756) #10 CHRNA2 (ENSOARG00020011996) #11 PTK2B (ENSOARG00020012073) #12 TRIM35 (ENSOARG00020012904) #13 STMN4 (ENSOARG00020013017) #14 ADRA1A (ENSOARG00020013199) #16 ENSOARG00020013277 DPYSL2 (ENSOARG00020013413) #18 PNMA2 (ENSOARG00020013810) ENSOARG00020013834 #20 PPP2R2A (ENSOARG00020013913) #21 EBF2 (ENSOARG00020014139) #22 CDCA2 (ENSOARG00020014388) #23 KCTD9 (ENSOARG00020014450) #24 DOCK5 (ENSOARG00020014672) #26 GNRH1 (ENSOARG00020017575) #25 NEFL (ENSOARG00020017673) #27 NEFM (ENSOARG00020017740) #28 ADAM7 (ENSOARG00020017810) #29 STC1 (ENSOARG00020019387) #32 NKX2-6 (ENSOARG00020019459) #33 NKX3-1 (ENSOARG00020019488) #34 SLC25A37 (ENSOARG00020019551) #35 ENTPD4 (ENSOARG00020019615) #37 ENSOARG00020019697 ENSOARG00020019730 RHOBTB2 (ENSOARG00020019759) Bovinae ANCESTRAL SPECIES 14 ENSGT00940000156806 ENSGT00530000063668.B.b #9 ENSGT00530000065109.h ENSGT00510000048121.j ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00990000214190 ENSGT00940000156208 #27 ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00940000154172.`b ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 Bos ANCESTRAL SPECIES 10 ENSGT00940000156806 ENSGT00530000063668.B.b #9 ENSGT00530000065109.h ENSGT00510000048121.j ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00990000214190 ENSGT00940000156208 #27 ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00940000154172.`b ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 Bos_a ANCESTRAL SPECIES 20 ENSGT00940000156806 ENSGT00530000063668.B.b #9 ENSGT00530000065109.h ENSGT00510000048121.j ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00990000214190 ENSGT00940000156208 #27 ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00940000154172.`b ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 Wild yak MODERN SPECIES 1486 ENSBMUG00000017193 APTX (ENSBMUG00000017120) ENSBMUG00000016995 #9 ENSBMUG00000016981 ENSBMUG00000016973 EPHX2 (ENSBMUG00000016915) #10 CHRNA2 (ENSBMUG00000016831) #11 PTK2B (ENSBMUG00000016777) #12 TRIM35 (ENSBMUG00000016700) #13 STMN4 (ENSBMUG00000016672) #14 ADRA1A (ENSBMUG00000016609) #16 DPYSL2 (ENSBMUG00000016569) #18 PNMA2 (ENSBMUG00000016534) BNIP3L (ENSBMUG00000016521) #20 PPP2R2A (ENSBMUG00000016501) #21 EBF2 (ENSBMUG00000016447) #22 CDCA2 (ENSBMUG00000016433) #23 KCTD9 (ENSBMUG00000016419) #24 GNRH1 (ENSBMUG00000016371) #25 DOCK5 (ENSBMUG00000016356) #26 NEFL (ENSBMUG00000016301) #27 NEFM (ENSBMUG00000016293) #28 Domestic yak MODERN SPECIES 26 ENSBGRG00000001185 #9 ENSBGRG00000001154 ENSBGRG00000001133 ENSBGRG00000001069 EPHX2 (ENSBGRG00000000999) #10 CHRNA2 (ENSBGRG00000000968) #11 PTK2B (ENSBGRG00000000804) #12 TRIM35 (ENSBGRG00000000766) #13 STMN4 (ENSBGRG00000000736) #14 ADRA1A (ENSBGRG00000000703) #16 DPYSL2 (ENSBGRG00000000520) #18 PNMA2 (ENSBGRG00000000490) ENSBGRG00000000482 ENSBGRG00000000444 #20 PPP2R2A (ENSBGRG00000000395) #21 EBF2 (ENSBGRG00000017109) #22 CDCA2 (ENSBGRG00000016906) #23 KCTD9 (ENSBGRG00000016782) #24 GNRH1 (ENSBGRG00000016731) #25 DOCK5 (ENSBGRG00000015972) #26 ENSBGRG00000015920 NEFL (ENSBGRG00000015850) #27 NEFM (ENSBGRG00000015744) #28 ENSBGRG00000015724 ADAM7 (ENSBGRG00000014923) #29 ENSBGRG00000014430 #30 ENSBGRG00000014380 STC1 (ENSBGRG00000014320) #32 NKX2-6 (ENSBGRG00000014251) #33 NKX3-1 (ENSBGRG00000014189) #34 SLC25A37 (ENSBGRG00000014111) #35 Bos_b ANCESTRAL SPECIES 3 ENSGT00940000155007 ENSGT00940000153558.b.i.b.a.a.h ENSGT00940000156806 ENSGT00530000063668.B.b #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00950000183031.B.e.b.a.a.a ENSGT00940000154172.`b ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 Hybrid Bos Indicus MODERN SPECIES 27 ENSBIXG00005022648 APTX (ENSBIXG00005022727) ENSBIXG00005022965 #9 ENSBIXG00005023012 ENSBIXG00005007577 EPHX2 (ENSBIXG00005023266) #10 ENSBIXG00005023343 #11 PTK2B (ENSBIXG00005023549) #12 TRIM35 (ENSBIXG00005023617) #13 STMN4 (ENSBIXG00005023682) #14 ADRA1A (ENSBIXG00005023744) #16 DPYSL2 (ENSBIXG00005004091) #18 PNMA2 (ENSBIXG00005023950) ENSBIXG00005023958 PPP2R2A (ENSBIXG00005024066) #21 EBF2 (ENSBIXG00005024188) #22 CDCA2 (ENSBIXG00005024231) #23 KCTD9 (ENSBIXG00005004143) #24 GNRH1 (ENSBIXG00005024264) #25 DOCK5 (ENSBIXG00005024516) #26 NEFL (ENSBIXG00005024596) #27 NEFM (ENSBIXG00005002572) #28 ADAM7 (ENSBIXG00005024699) #29 ENSBIXG00005025151 #31 ENSBIXG00005025234 ENSBIXG00005004295 STC1 (ENSBIXG00005025303) #32 NKX2-6 (ENSBIXG00005025314) #33 NKX3-1 (ENSBIXG00005025337) #34 SLC25A37 (ENSBIXG00005025367) #35 LOXL2 (ENSBIXG00005025479) Cow MODERN SPECIES 27 SMU1 (ENSBTAG00000019564) DNAJA1 (ENSBTAG00000016265) APTX (ENSBTAG00000013947) ENSBTAG00000015027 #9 GULO (ENSBTAG00000026748) EPHX2 (ENSBTAG00000015241) #10 CHRNA2 (ENSBTAG00000002252) #11 PTK2B (ENSBTAG00000005958) #12 TRIM35 (ENSBTAG00000009958) #13 STMN4 (ENSBTAG00000017627) #14 ADRA1A (ENSBTAG00000031632) #16 DPYSL2 (ENSBTAG00000018373) #18 PNMA2 (ENSBTAG00000037986) BNIP3L (ENSBTAG00000021307) #20 PPP2R2A (ENSBTAG00000018317) #21 EBF2 (ENSBTAG00000040390) #22 CDCA2 (ENSBTAG00000002756) #23 KCTD9 (ENSBTAG00000012382) #24 GNRH1 (ENSBTAG00000000164) #25 DOCK5 (ENSBTAG00000015513) #26 NEFL (ENSBTAG00000021949) #27 NEFM (ENSBTAG00000039530) ADAM7 (ENSBTAG00000039171) #29 ADAMDEC1 (ENSBTAG00000001125) #30 ADAM28 (ENSBTAG00000037929) #31 ENSBTAG00000038064 ENSBTAG00000048755 STC1 (ENSBTAG00000001687) #32 ENSBTAG00000051369 NKX2-6 (ENSBTAG00000014008) #33 NKX3-1 (ENSBTAG00000001221) #34 American bison MODERN SPECIES 3064 ENSBBBG00000011395 APTX (ENSBBBG00000011383) ENSBBBG00000011270 #9 ENSBBBG00000007068 EPHX2 (ENSBBBG00000011228) #10 CHRNA2 (ENSBBBG00000011130) #11 PTK2B (ENSBBBG00000002002) #12 ENSBBBG00000011020 #13 STMN4 (ENSBBBG00000011014) #14 ADRA1A (ENSBBBG00000001967) #16 DPYSL2 (ENSBBBG00000010977) #18 PNMA2 (ENSBBBG00000001944) BNIP3L (ENSBBBG00000001943) #20 PPP2R2A (ENSBBBG00000010922) #21 ENSBBBG00000001938 EBF2 (ENSBBBG00000010900) #22 CDCA2 (ENSBBBG00000010883) #23 KCTD9 (ENSBBBG00000001907) #24 GNRH1 (ENSBBBG00000010860) #25 DOCK5 (ENSBBBG00000010849) #26 NEFM (ENSBBBG00000010802) #28 NEFL (ENSBBBG00000010785) #27 Siberian musk deer MODERN SPECIES 327 ENSMMSG00000007188 ENSMMSG00000007169 EPHX2 (ENSMMSG00000006938) #10 CHRNA2 (ENSMMSG00000006874) #11 PTK2B (ENSMMSG00000006593) #12 TRIM35 (ENSMMSG00000006491) #13 STMN4 (ENSMMSG00000006293) #14 ENSMMSG00000006276 ENSMMSG00000006269 ENSMMSG00000006250 ADRA1A (ENSMMSG00000006243) #16 ENSMMSG00000006237 DPYSL2 (ENSMMSG00000006136) #18 BNIP3L (ENSMMSG00000006092) #20 ENSMMSG00000005972 #21 EBF2 (ENSMMSG00000005908) #22 CDCA2 (ENSMMSG00000005842) #23 KCTD9 (ENSMMSG00000005761) #24 GNRH1 (ENSMMSG00000005726) #25 DOCK5 (ENSMMSG00000005425) #26 NEFL (ENSMMSG00000005342) #27 NEFM (ENSMMSG00000005289) #28 ADAM7 (ENSMMSG00000004688) #29 ADAMDEC1 (ENSMMSG00000004507) #30 ADAM28 (ENSMMSG00000004400) #31 ENSMMSG00000004334 ENSMMSG00000004320 STC1 (ENSMMSG00000013160) #32 NKX2-6 (ENSMMSG00000013148) #33 NKX3-1 (ENSMMSG00000013132) #34 SLC25A37 (ENSMMSG00000013114) #35 Yarkand deer MODERN SPECIES 7 SPINK4 (ENSCHYG00000006676) B4GALT1 (ENSCHYG00000006601) SMU1 (ENSCHYG00000006551) ENSCHYG00000006506 APTX (ENSCHYG00000006316) ENSCHYG00000006124 EPHX2 (ENSCHYG00000005702) #10 CHRNA2 (ENSCHYG00000005610) #11 PTK2B (ENSCHYG00000005281) #12 TRIM35 (ENSCHYG00000005184) #13 STMN4 (ENSCHYG00000005084) #14 ADRA1A (ENSCHYG00000004551) #16 DPYSL2 (ENSCHYG00000026867) #18 ENSCHYG00000026854 #20 ENSCHYG00000026841 #21 EBF2 (ENSCHYG00000026813) #22 CDCA2 (ENSCHYG00000026788) #23 KCTD9 (ENSCHYG00000026770) #24 GNRH1 (ENSCHYG00000026755) #25 DOCK5 (ENSCHYG00000026683) #26 NEFL (ENSCHYG00000026647) #27 NEFM (ENSCHYG00000026636) #28 ADAM7 (ENSCHYG00000026508) #29 ADAMDEC1 (ENSCHYG00000026439) #30 ADAM28 (ENSCHYG00000025837) #31 ENSCHYG00000025762 STC1 (ENSCHYG00000025743) #32 NKX2-6 (ENSCHYG00000025734) #33 NKX3-1 (ENSCHYG00000025709) #34 SLC25A37 (ENSCHYG00000025677) #35 ENTPD4 (ENSCHYG00000025626) #37 Laurasiatheria_b ANCESTRAL SPECIES 8 ENSGT00940000158598 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00990000214190 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 Carnivora ANCESTRAL SPECIES 5 ENSGT00940000158598 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b.q.a #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 Caniformia ANCESTRAL SPECIES 7 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b.q.b #20 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b.q.a #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 Caniformia_b ANCESTRAL SPECIES 5 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00390000000378.d.b.db.b ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b.q.b #20 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b.q.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 Ursidae ANCESTRAL SPECIES 50 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b.q.b #20 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b.q.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 Ursus ANCESTRAL SPECIES 126 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b.q.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 ENSGT00530000063711.a ENSGT00720000108860 American black bear MODERN SPECIES 941 PPP2R2A (ENSUAMG00000020589) #21 EBF2 (ENSUAMG00000020544) #22 Polar bear MODERN SPECIES 242 ADRA1A (ENSUMAG00000003460) #16 DPYSL2 (ENSUMAG00000003466) #18 BNIP3L (ENSUMAG00000003506) #20 PPP2R2A (ENSUMAG00000003521) #21 EBF2 (ENSUMAG00000003592) #22 ENSUMAG00000004389 #23 ENSUMAG00000004393 #23 KCTD9 (ENSUMAG00000004405) #24 GNRH1 (ENSUMAG00000004411) #25 ENSUMAG00000004417 #26 ENSUMAG00000004442 #26 ENSUMAG00000004621 NEFL (ENSUMAG00000004623) #27 ENSUMAG00000004628 ADAM7 (ENSUMAG00000004656) #29 ADAMDEC1 (ENSUMAG00000004698) #30 ADAM28 (ENSUMAG00000004702) #31 STC1 (ENSUMAG00000004720) #32 SLC25A37 (ENSUMAG00000004734) #35 ENTPD4 (ENSUMAG00000004742) #37 Giant Panda MODERN SPECIES 15 NOP10 (ENSAMEG00000026587) ENSAMEG00000024734 NUTM1 (ENSAMEG00000004098) ENSAMEG00000004112 ENSAMEG00000020043 ENSAMEG00000029055 ENSAMEG00000028761 ENSAMEG00000024521 ENSAMEG00000025486 ENSAMEG00000023985 ENSAMEG00000000220 #16 DPYSL2 (ENSAMEG00000000223) #18 PNMA2 (ENSAMEG00000023900) BNIP3L (ENSAMEG00000000287) #20 PPP2R2A (ENSAMEG00000000302) #21 EBF2 (ENSAMEG00000000326) #22 CDCA2 (ENSAMEG00000000346) #23 KCTD9 (ENSAMEG00000000365) #24 GNRH1 (ENSAMEG00000000386) #25 DOCK5 (ENSAMEG00000000393) #26 NEFL (ENSAMEG00000000584) #27 ENSAMEG00000000596 ADAM7 (ENSAMEG00000001607) #29 ADAMDEC1 (ENSAMEG00000001578) #30 ADAM28 (ENSAMEG00000001508) #31 STC1 (ENSAMEG00000024356) #32 NKX2-6 (ENSAMEG00000002863) #33 NKX3-1 (ENSAMEG00000026096) #34 SLC25A37 (ENSAMEG00000002868) #35 ENTPD4 (ENSAMEG00000002873) #37 LOXL2 (ENSAMEG00000002911) Mustelinae ANCESTRAL SPECIES 104 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 Ferret MODERN SPECIES 256 ENSMPUG00000003166 AADAT (ENSMPUG00000003172) ENSMPUG00000003181 PPP2R2A (ENSMPUG00000003186) #21 EBF2 (ENSMPUG00000003195) #22 ENSMPUG00000003203 CDCA2 (ENSMPUG00000003208) #23 KCTD9 (ENSMPUG00000003214) #24 GNRH1 (ENSMPUG00000003219) #25 DOCK5 (ENSMPUG00000003228) #26 NEFL (ENSMPUG00000003244) #27 ENSMPUG00000003249 ADAM7 (ENSMPUG00000003252) #29 ENSMPUG00000018762 ADAMDEC1 (ENSMPUG00000003330) #30 ADAM28 (ENSMPUG00000003381) #31 STC1 (ENSMPUG00000003399) #32 NKX2-6 (ENSMPUG00000003409) #33 NKX3-1 (ENSMPUG00000003418) #34 SLC25A37 (ENSMPUG00000003422) #35 American mink MODERN SPECIES 363 PPP2R2A (ENSNVIG00000019771) #21 EBF2 (ENSNVIG00000019723) #22 CDCA2 (ENSNVIG00000019695) #23 KCTD9 (ENSNVIG00000019678) #24 GNRH1 (ENSNVIG00000019664) #25 DOCK5 (ENSNVIG00000019592) #26 ENSNVIG00000019578 #27 NEFM (ENSNVIG00000019575) #28 Canidae ANCESTRAL SPECIES 31 ENSGT00940000158598 ENSGT00390000004380.f #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b.q.a #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734.h #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 Canis_lupus ANCESTRAL SPECIES 18 ENSGT00390000004380.f #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT00980000202976 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b.q.a #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734.h #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 Dingo MODERN SPECIES 304 SCARA3 (ENSCAFG00020012469) #8 CLU (ENSCAFG00020012476) #9 ENSCAFG00020012482 EPHX2 (ENSCAFG00020012494) #10 CHRNA2 (ENSCAFG00020012510) #11 PTK2B (ENSCAFG00020012533) #12 TRIM35 (ENSCAFG00020012559) #13 ENSCAFG00020012574 STMN4 (ENSCAFG00020012576) #14 ADRA1A (ENSCAFG00020012587) #16 DPYSL2 (ENSCAFG00020012592) #18 ENSCAFG00020012600 PNMA2 (ENSCAFG00020012608) ENSCAFG00020012611 #20 PPP2R2A (ENSCAFG00020012619) #21 EBF2 (ENSCAFG00020012629) #22 CDCA2 (ENSCAFG00020012668) #23 KCTD9 (ENSCAFG00020012683) #24 GNRH1 (ENSCAFG00020012686) #25 DOCK5 (ENSCAFG00020012698) #26 NEFM (ENSCAFG00020012742) #28 NEFL (ENSCAFG00020012757) #27 ADAM7 (ENSCAFG00020012781) #29 ADAM28 (ENSCAFG00020012819) #31 STC1 (ENSCAFG00020012841) #32 ENSCAFG00020012845 #33 NKX3-1 (ENSCAFG00020012847) #34 SLC25A37 (ENSCAFG00020012855) #35 ENSCAFG00020012856 #37 LOXL2 (ENSCAFG00020012866) R3HCC1 (ENSCAFG00020012870) Dog MODERN SPECIES 17 SCARA3 (ENSCAFG00845010317) #8 CLU (ENSCAFG00845010565) #9 ENSCAFG00845010841 EPHX2 (ENSCAFG00845011024) #10 CHRNA2 (ENSCAFG00845011451) #11 PTK2B (ENSCAFG00845011700) #12 TRIM35 (ENSCAFG00845012423) #13 ENSCAFG00845012522 STMN4 (ENSCAFG00845012672) #14 ADRA1A (ENSCAFG00845012931) #16 DPYSL2 (ENSCAFG00845013099) #18 ENSCAFG00845013305 PNMA2 (ENSCAFG00845013366) PPP2R2A (ENSCAFG00845013440) #20 PPP2R2A (ENSCAFG00845013645) #21 EBF2 (ENSCAFG00845013887) #22 ENSCAFG00845013986 ENSCAFG00845014017 CDCA2 (ENSCAFG00845014066) #23 KCTD9 (ENSCAFG00845014154) #24 GNRH1 (ENSCAFG00845014221) #25 DOCK5 (ENSCAFG00845014289) #26 NEFL (ENSCAFG00845014438) #27 NEFM (ENSCAFG00845014497) ADAM7 (ENSCAFG00845014694) #29 ADAMDEC1 (ENSCAFG00845014873) #30 ADAM28 (ENSCAFG00845015078) #31 STC1 (ENSCAFG00845015608) #32 NKX2-6 (ENSCAFG00845015839) #33 NKX3-1 (ENSCAFG00845015954) #34 SLC25A37 (ENSCAFG00845016130) #35 Red fox MODERN SPECIES 67 SCARA3 (ENSVVUG00000003490) #8 CLU (ENSVVUG00000003495) #9 ENSVVUG00000003499 EPHX2 (ENSVVUG00000003509) #10 CHRNA2 (ENSVVUG00000003529) #11 PTK2B (ENSVVUG00000003546) #12 TRIM35 (ENSVVUG00000003575) #13 STMN4 (ENSVVUG00000003585) #14 ADRA1A (ENSVVUG00000003602) #16 ENSVVUG00000003623 DPYSL2 (ENSVVUG00000003636) #18 ENSVVUG00000003679 PNMA2 (ENSVVUG00000003687) ENSVVUG00000003696 #20 PPP2R2A (ENSVVUG00000003745) #21 EBF2 (ENSVVUG00000003772) #22 ENSVVUG00000004033 #23 ENSVVUG00000004038 KCTD9 (ENSVVUG00000004063) #24 GNRH1 (ENSVVUG00000004172) #25 ENSVVUG00000004182 #26 ENSVVUG00000004272 #26 ENSVVUG00000004850 NEFL (ENSVVUG00000004852) #27 NEFM (ENSVVUG00000004862) #28 ADAM7 (ENSVVUG00000004873) #29 ADAMDEC1 (ENSVVUG00000004882) #30 ADAM28 (ENSVVUG00000004891) #31 STC1 (ENSVVUG00000004921) #32 NKX2-6 (ENSVVUG00000004929) #33 ENSVVUG00000004932 #34 Felidae ANCESTRAL SPECIES 4 ENSGT00940000156986 ENSGT00390000018326 ENSGT00550000074618.a.b ENSGT00390000006260 ENSGT00950000183162.b ENSGT00940000159168 ENSGT00940000157326.h ENSGT00940000160287 ENSGT00390000012859 ENSGT00390000003878 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b.q.a #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 Panthera ANCESTRAL SPECIES 5 ENSGT00940000156986 ENSGT00390000018326 ENSGT00550000074618.a.b ENSGT00390000006260 ENSGT00950000183162.b ENSGT00940000159168 ENSGT00940000157326.h ENSGT00940000160287 ENSGT00390000012859 ENSGT00390000003878 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b.q.a #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000154418.a.b #28 ENSGT00940000161406.b #29 ENSGT00940000161406.a #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 Panthera_a ANCESTRAL SPECIES 2 ENSGT00940000156986 ENSGT00390000018326.c ENSGT00550000074618.a.b ENSGT00390000006260 ENSGT00950000183162.b ENSGT00940000159168 ENSGT00940000157326.h ENSGT00940000160287 ENSGT00390000012859 ENSGT00390000003878 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b.q.a #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000154418.a.b #28 ENSGT00940000161406.b #29 ENSGT00940000161685.A.a ENSGT00940000161406.a #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 lion MODERN SPECIES 4 ENSPLOG00000001604 PPP2CB (ENSPLOG00000001655) TEX15 (ENSPLOG00000001699) PURG (ENSPLOG00000001734) WRN (ENSPLOG00000001754) NRG1 (ENSPLOG00000002181) ENSPLOG00000002510 FUT10 (ENSPLOG00000002522) MAK16 (ENSPLOG00000002547) TTI2 (ENSPLOG00000002576) ADRA1A (ENSPLOG00000002621) #16 DPYSL2 (ENSPLOG00000002681) #18 PNMA2 (ENSPLOG00000002750) BNIP3L (ENSPLOG00000002778) #20 PPP2R2A (ENSPLOG00000002836) #21 EBF2 (ENSPLOG00000002904) #22 CDCA2 (ENSPLOG00000002958) #23 KCTD9 (ENSPLOG00000003006) #24 GNRH1 (ENSPLOG00000003031) #25 DOCK5 (ENSPLOG00000003063) #26 ENSPLOG00000003197 NEFL (ENSPLOG00000003220) #27 ADAM7 (ENSPLOG00000003308) #29 ADAMDEC1 (ENSPLOG00000003417) #30 ADAM28 (ENSPLOG00000003535) #31 STC1 (ENSPLOG00000003716) #32 NKX2-6 (ENSPLOG00000003735) #33 NKX3-1 (ENSPLOG00000003755) #34 SLC25A37 (ENSPLOG00000003786) #35 ENTPD4 (ENSPLOG00000003831) #37 LOXL2 (ENSPLOG00000003867) leopard MODERN SPECIES 49 PURG (ENSPPRG00000011836) WRN (ENSPPRG00000010928) ENSPPRG00000009523 ENSPPRG00000009398 ENSPPRG00000009260 NRG1 (ENSPPRG00000008036) FUT10 (ENSPPRG00000002861) MAK16 (ENSPPRG00000002317) TTI2 (ENSPPRG00000002077) ENSPPRG00000001728 ADRA1A (ENSPPRG00000000941) #16 DPYSL2 (ENSPPRG00000000390) #18 PNMA2 (ENSPPRG00000017614) ENSPPRG00000023377 #20 PPP2R2A (ENSPPRG00000023725) #21 EBF2 (ENSPPRG00000024264) #22 CDCA2 (ENSPPRG00000017681) #23 KCTD9 (ENSPPRG00000013953) #24 GNRH1 (ENSPPRG00000013600) #25 DOCK5 (ENSPPRG00000013437) #26 ENSPPRG00000011381 #27 NEFL (ENSPPRG00000010879) #27 NEFM (ENSPPRG00000009800) #28 ENSPPRG00000008890 #29 ENSPPRG00000007410 #29 ADAMDEC1 (ENSPPRG00000006694) #30 ADAM28 (ENSPPRG00000005754) #31 STC1 (ENSPPRG00000004675) #32 NKX2-6 (ENSPPRG00000004345) #33 NKX3-1 (ENSPPRG00000004152) #34 SLC25A37 (ENSPPRG00000003800) #35 Tiger MODERN SPECIES 446 GTF2E2 (ENSPTIG00000015001) GSR (ENSPTIG00000010109) UBXN8 (ENSPTIG00000008126) PPP2CB (ENSPTIG00000006186) PURG (ENSPTIG00000000641) WRN (ENSPTIG00000020609) NRG1 (ENSPTIG00000015564) FUT10 (ENSPTIG00000014430) MAK16 (ENSPTIG00000014223) TTI2 (ENSPTIG00000013872) ADRA1A (ENSPTIG00000012913) #16 DPYSL2 (ENSPTIG00000009643) #18 PNMA2 (ENSPTIG00000004671) BNIP3L (ENSPTIG00000007550) #20 PPP2R2A (ENSPTIG00000004184) #21 EBF2 (ENSPTIG00000021987) #22 CDCA2 (ENSPTIG00000020815) #23 KCTD9 (ENSPTIG00000020189) #24 GNRH1 (ENSPTIG00000019710) #25 DOCK5 (ENSPTIG00000015263) #26 NEFL (ENSPTIG00000013748) #27 ENSPTIG00000013410 ENSPTIG00000010903 #29 ENSPTIG00000008882 #29 ADAMDEC1 (ENSPTIG00000007220) #30 ADAM28 (ENSPTIG00000020425) #31 STC1 (ENSPTIG00000020203) #32 NKX3-1 (ENSPTIG00000019365) #34 SLC25A37 (ENSPTIG00000018510) #35 ENTPD4 (ENSPTIG00000014881) #37 LOXL2 (ENSPTIG00000013484) Cat MODERN SPECIES 235 GSR (ENSFCAG00000001476) UBXN8 (ENSFCAG00000026418) PPP2CB (ENSFCAG00000025139) TEX15 (ENSFCAG00000041903) PURG (ENSFCAG00000014218) WRN (ENSFCAG00000024759) NRG1 (ENSFCAG00000024086) FUT10 (ENSFCAG00000003845) MAK16 (ENSFCAG00000033972) TTI2 (ENSFCAG00000015300) ADRA1A (ENSFCAG00000023739) #16 DPYSL2 (ENSFCAG00000005338) #18 PNMA2 (ENSFCAG00000032107) BNIP3L (ENSFCAG00000030159) #20 PPP2R2A (ENSFCAG00000029721) #21 EBF2 (ENSFCAG00000003607) #22 ENSFCAG00000023720 CDCA2 (ENSFCAG00000011887) #23 KCTD9 (ENSFCAG00000011885) #24 GNRH1 (ENSFCAG00000029305) #25 DOCK5 (ENSFCAG00000011883) #26 NEFL (ENSFCAG00000013441) #27 NEFM (ENSFCAG00000029288) #28 ADAM7 (ENSFCAG00000013087) #29 ADAMDEC1 (ENSFCAG00000003531) #30 ADAM28 (ENSFCAG00000008957) #31 STC1 (ENSFCAG00000026611) #32 NKX2-6 (ENSFCAG00000038582) #33 NKX3-1 (ENSFCAG00000039688) #34 SLC25A37 (ENSFCAG00000005418) #35 ENTPD4 (ENSFCAG00000005417) #37 Laurasiatheria_c ANCESTRAL SPECIES 8 ENSGT00940000158598 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00990000214190 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 Equus ANCESTRAL SPECIES 24 ENSGT00940000158598 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00990000214190 ENSGT00940000156208 #27 ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 Donkey MODERN SPECIES 22 ESCO2 (ENSEASG00005016302) CCDC25 (ENSEASG00005037176) #7 SCARA3 (ENSEASG00005016295) #8 CLU (ENSEASG00005016294) #9 ENSEASG00005016285 EPHX2 (ENSEASG00005016280) #10 CHRNA2 (ENSEASG00005016279) #11 PTK2B (ENSEASG00005015727) #12 TRIM35 (ENSEASG00005015643) #13 STMN4 (ENSEASG00005015641) #14 ADRA1A (ENSEASG00005015639) #16 DPYSL2 (ENSEASG00005015636) #18 BNIP3L (ENSEASG00005015633) #20 ENSEASG00005015629 #21 PNMA2 (ENSEASG00005035920) EBF2 (ENSEASG00005015624) #22 CDCA2 (ENSEASG00005015623) #23 KCTD9 (ENSEASG00005015621) #24 GNRH1 (ENSEASG00005015619) #25 DOCK5 (ENSEASG00005015240) #26 ENSEASG00005032794 NEFL (ENSEASG00005015035) #27 NEFM (ENSEASG00005015031) #28 ENSEASG00005018749 #29 ENSEASG00005025876 #29 ADAMDEC1 (ENSEASG00005018757) #30 ADAM28 (ENSEASG00005018766) #31 STC1 (ENSEASG00005025792) #32 NKX2-6 (ENSEASG00005018774) #33 NKX3-1 (ENSEASG00005018775) #34 SLC25A37 (ENSEASG00005026222) #35 Horse MODERN SPECIES 11 ESCO2 (ENSECAG00000012899) CCDC25 (ENSECAG00000011924) #7 SCARA3 (ENSECAG00000011350) #8 CLU (ENSECAG00000007010) #9 GULO (ENSECAG00000003068) EPHX2 (ENSECAG00000023444) #10 CHRNA2 (ENSECAG00000022609) #11 PTK2B (ENSECAG00000018924) #12 TRIM35 (ENSECAG00000018548) #13 STMN4 (ENSECAG00000044039) #14 ADRA1A (ENSECAG00000015917) #16 DPYSL2 (ENSECAG00000008662) #18 PNMA2 (ENSECAG00000008517) BNIP3L (ENSECAG00000005770) #20 PPP2R2A (ENSECAG00000019205) #21 EBF2 (ENSECAG00000014179) #22 ENSECAG00000051786 ENSECAG00000032941 ENSECAG00000048777 CDCA2 (ENSECAG00000013188) #23 KCTD9 (ENSECAG00000011535) #24 GNRH1 (ENSECAG00000010664) #25 DOCK5 (ENSECAG00000023607) #26 NEFL (ENSECAG00000022890) #27 NEFM (ENSECAG00000022370) #28 ADAM7 (ENSECAG00000020537) #29 ADAMDEC1 (ENSECAG00000019922) #30 ADAM28 (ENSECAG00000014577) #31 ENSECAG00000053236 STC1 (ENSECAG00000013731) #32 NKX2-6 (ENSECAG00000028673) #33 Chiroptera ANCESTRAL SPECIES 64 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 Megabat MODERN SPECIES 3400 BNIP3L (ENSPVAG00000008294) #20 PPP2R2A (ENSPVAG00000024136) #21 EBF2 (ENSPVAG00000024254) #22 Microchiroptera ANCESTRAL SPECIES 57 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 Microbat MODERN SPECIES 1085 ADRA1A (ENSMLUG00000027812) #16 ENSMLUG00000023958 ENSMLUG00000025762 DPYSL2 (ENSMLUG00000000271) #18 BNIP3L (ENSMLUG00000014949) #20 PPP2R2A (ENSMLUG00000030355) #21 EBF2 (ENSMLUG00000011509) #22 CDCA2 (ENSMLUG00000006321) #23 KCTD9 (ENSMLUG00000006310) #24 GNRH1 (ENSMLUG00000006306) #25 DOCK5 (ENSMLUG00000006278) #26 ENSMLUG00000029940 ADAM7 (ENSMLUG00000009580) #29 ADAMDEC1 (ENSMLUG00000009552) #30 ADAM28 (ENSMLUG00000009526) #31 ENSMLUG00000027935 ENSMLUG00000023520 STC1 (ENSMLUG00000010663) #32 NKX3-1 (ENSMLUG00000006118) #34 Greater horseshoe bat MODERN SPECIES 9 FBXL12 (ENSRFEG00010005897) ENSRFEG00010005931 ENSRFEG00010005962 ZNF699 (ENSRFEG00010005993) ENSRFEG00010006027 ENSRFEG00010006057 ENSRFEG00010006089 ENSRFEG00010006149 OR7D4 (ENSRFEG00010006172) OR7D2 (ENSRFEG00010006200) ADRA1A (ENSRFEG00010006218) #16 DPYSL2 (ENSRFEG00010006268) #18 PNMA2 (ENSRFEG00010006352) BNIP3L (ENSRFEG00010006372) #20 PPP2R2A (ENSRFEG00010006444) #21 EBF2 (ENSRFEG00010006593) #22 CDCA2 (ENSRFEG00010006703) #23 KCTD9 (ENSRFEG00010006936) #24 GNRH1 (ENSRFEG00010006984) #25 DOCK5 (ENSRFEG00010007027) #26 NEFL (ENSRFEG00010007163) #27 ENSRFEG00010007201 ADAM7 (ENSRFEG00010007316) #29 ADAMDEC1 (ENSRFEG00010007930) #30 ADAM28 (ENSRFEG00010007990) #31 STC1 (ENSRFEG00010008368) #32 ENSRFEG00010008447 ENSRFEG00010008464 NKX2-6 (ENSRFEG00010008490) #33 NKX3-1 (ENSRFEG00010008525) #34 SLC25A37 (ENSRFEG00010008583) #35 Atlantogenata ANCESTRAL SPECIES 23 ENSGT00940000158598 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 Xenarthra ANCESTRAL SPECIES 559 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT01030000234522.C.b.e.a.a.b ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a.hb #21 ENSGT00950000182859.A.a.a.b #22 Sloth MODERN SPECIES 7810 EBF2 (ENSCHOG00000007889) #22 Armadillo MODERN SPECIES 2325 POF1B (ENSDNOG00000016063) ZNF711 (ENSDNOG00000031961) ENSDNOG00000037476 #16 DPYSL2 (ENSDNOG00000010850) #18 PNMA2 (ENSDNOG00000010846) BNIP3L (ENSDNOG00000031749) #20 ENSDNOG00000042970 #21 EBF2 (ENSDNOG00000040488) #22 Afrotheria ANCESTRAL SPECIES 19 ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 ENSGT00530000063711.a Tenrec MODERN SPECIES 17016 ENSETEG00000017311 #22 Afrotheria_a ANCESTRAL SPECIES 18 ENSGT00720000108839 ENSGT00940000158598 ENSGT00390000004380 #7 ENSGT00940000158238 #8 ENSGT00530000063668.B #9 ENSGT00510000049722 ENSGT00940000158614 #10 ENSGT00940000158299 #11 ENSGT00940000157269.a.a #12 ENSGT00940000160868 #13 ENSGT01030000234597.a.b.a #14 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000161406 #29 ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 ENSGT00530000063711.a Elephant MODERN SPECIES 225 PBK (ENSLAFG00000001231) ESCO2 (ENSLAFG00000001229) CCDC25 (ENSLAFG00000001228) #7 SCARA3 (ENSLAFG00000011471) #8 CLU (ENSLAFG00000011466) #9 ENSLAFG00000031573 EPHX2 (ENSLAFG00000005225) #10 CHRNA2 (ENSLAFG00000026710) #11 PTK2B (ENSLAFG00000005217) #12 TRIM35 (ENSLAFG00000009354) #13 STMN4 (ENSLAFG00000022503) #14 ADRA1A (ENSLAFG00000000055) #16 DPYSL2 (ENSLAFG00000003305) #18 BNIP3L (ENSLAFG00000018106) #20 PPP2R2A (ENSLAFG00000021762) #21 EBF2 (ENSLAFG00000022465) #22 CDCA2 (ENSLAFG00000003532) #23 KCTD9 (ENSLAFG00000003529) #24 GNRH1 (ENSLAFG00000003526) #25 DOCK5 (ENSLAFG00000003516) #26 NEFL (ENSLAFG00000026910) #27 ENSLAFG00000006017 ENSLAFG00000022323 ENSLAFG00000030752 ENSLAFG00000026486 ADAM7 (ENSLAFG00000000586) #29 ADAM28 (ENSLAFG00000005662) #31 STC1 (ENSLAFG00000005774) #32 NKX3-1 (ENSLAFG00000008941) #34 SLC25A37 (ENSLAFG00000026743) #35 ENTPD4 (ENSLAFG00000008176) #37 Hyrax MODERN SPECIES 7369 ENSPCAG00000000388 EBF2 (ENSPCAG00000018823) #22 Marsupialia ANCESTRAL SPECIES 26 ENSGT00940000154909 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00530000063970.c.b ENSGT00390000005989.b #32 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 Marsupialia_b ANCESTRAL SPECIES 23 ENSGT00940000157488 ENSGT00940000154863 ENSGT01050000244898.b.a ENSGT00390000013048 ENSGT00940000157631 ENSGT00940000159627 ENSGT00940000154148.a.b ENSGT00940000153710.a ENSGT00940000155847 ENSGT00390000014208 ENSGT00940000154909 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000154418.a.b #28 ENSGT00940000161406 #29 ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00530000063970.c.b ENSGT00390000005989.b #32 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 Diprotodontia ANCESTRAL SPECIES 35 ENSGT00940000157488 ENSGT00940000154863 ENSGT01050000244898.b.a ENSGT00390000013048 ENSGT00940000157631 ENSGT00940000159627 ENSGT00940000154148.a.b ENSGT00940000153710.a ENSGT00940000155847 ENSGT00390000014208 ENSGT00940000154909 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00530000063970.c.b ENSGT00390000005989.b #32 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 ENSGT00530000063711.a Diprotodontia_a DUPLICATION Diprotodontia_a ANCESTRAL SPECIES 34 ENSGT00940000157488 ENSGT00940000154863 ENSGT01050000244898.b.a ENSGT00390000013048 ENSGT00940000157631 ENSGT00940000159627 ENSGT00940000154148.a.b ENSGT00940000153710.a ENSGT00940000155847 ENSGT00390000014208 ENSGT00940000154909 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a.g.a #21 ENSGT00950000182859.A.a.a.b.g #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00900000141143 #30 ENSGT00940000156716 #31 ENSGT00530000063970.c.b ENSGT00390000005989.b #32 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 ENSGT00530000063711.a koala MODERN SPECIES 124 MTHFD2 (ENSPCIG00000023570) MOB1A (ENSPCIG00000023572) ENSPCIG00000023576 TET3 (ENSPCIG00000023577) ENSPCIG00000023583 ENSPCIG00000023588 STAMBP (ENSPCIG00000022956) DUSP11 (ENSPCIG00000022957) ENSPCIG00000022960 ENSPCIG00000029147 LRRTM4 (ENSPCIG00000001491) ADRA1A (ENSPCIG00000031058) #16 DPYSL2 (ENSPCIG00000025157) #18 ENSPCIG00000025163 #20 PPP2R2A (ENSPCIG00000025165) #21 ENSPCIG00000025169 #22 Common wonbat MODERN SPECIES 1069 LRRTM4 (ENSVURG00010001769) ADRA1A (ENSVURG00010001754) #16 DPYSL2 (ENSVURG00010001742) #18 BNIP3L (ENSVURG00010001709) #20 ENSVURG00010001698 ENSVURG00010001676 #21 EBF2 (ENSVURG00010001624) #22 ENSVURG00010001573 #23 KCTD9 (ENSVURG00010001552) #24 GNRH1 (ENSVURG00010001537) #25 DOCK5 (ENSVURG00010001437) #26 NEFL (ENSVURG00010001385) #27 ENSVURG00010001289 ENSVURG00010001245 #30 ADAM28 (ENSVURG00010001006) #31 ENSVURG00010000961 STC1 (ENSVURG00010000938) #32 ENSVURG00010000932 SLC25A37 (ENSVURG00010000911) #35 ENTPD4 (ENSVURG00010000898) #37 LOXL2 (ENSVURG00010000862) R3HCC1 (ENSVURG00010000849) Diprotodontia_a ANCESTRAL SPECIES ENSGT00950000182859.A.a.a.b.h #22 koala MODERN SPECIES 88 ENSPCIG00000000815 #22 ENSPCIG00000001012 ENSPCIG00000001033 #23 KCTD9 (ENSPCIG00000001064) #24 DOCK5 (ENSPCIG00000001109) #26 NEFL (ENSPCIG00000027211) #27 ENSPCIG00000016966 ADAMDEC1 (ENSPCIG00000016489) #30 ADAM28 (ENSPCIG00000011332) #31 ENSPCIG00000037234 STC1 (ENSPCIG00000015151) #32 ENSPCIG00000020778 NKX3-1 (ENSPCIG00000020776) #34 SLC25A37 (ENSPCIG00000035854) #35 ENTPD4 (ENSPCIG00000020770) #37 LOXL2 (ENSPCIG00000020766) Wallaby MODERN SPECIES 142 EBF2 (ENSMEUG00000009275) #22 Tasmanian devil MODERN SPECIES 1 ENSSHAG00000007748 TET3 (ENSSHAG00000028758) DGUOK (ENSSHAG00000024485) ACTG2 (ENSSHAG00000004358) ENSSHAG00000003676 ENSSHAG00000026406 ENSSHAG00000001601 ENSSHAG00000026380 ENSSHAG00000027206 ENSSHAG00000003196 ENSSHAG00000021277 ENSSHAG00000005644 #16 ENSSHAG00000008277 #18 BNIP3L (ENSSHAG00000021764) #20 PPP2R2A (ENSSHAG00000025445) #21 EBF2 (ENSSHAG00000021589) #22 ENSSHAG00000014469 #23 KCTD9 (ENSSHAG00000001024) #24 GNRH1 (ENSSHAG00000029017) #25 DOCK5 (ENSSHAG00000002033) #26 ENSSHAG00000028159 #27 NEFM (ENSSHAG00000006728) #28 ENSSHAG00000011334 #29 ADAMDEC1 (ENSSHAG00000011993) #30 ADAM28 (ENSSHAG00000012316) #31 ENSSHAG00000025330 STC1 (ENSSHAG00000026997) #32 ENSSHAG00000025937 ENSSHAG00000022384 NKX3-1 (ENSSHAG00000015475) #34 SLC25A37 (ENSSHAG00000021392) #35 Opossum MODERN SPECIES ENSMODG00000003893 ENSMODG00000045356 ENSMODG00000049355 ENSMODG00000019174 ENSMODG00000044059 ENSMODG00000025779 EXOC6B (ENSMODG00000019186) ENSMODG00000039640 LRRTM4 (ENSMODG00000016671) ENSMODG00000050679 ADRA1A (ENSMODG00000016673) #16 ENSMODG00000016680 #18 BNIP3L (ENSMODG00000016685) #20 ENSMODG00000043642 PPP2R2A (ENSMODG00000016691) #21 EBF2 (ENSMODG00000016702) #22 ENSMODG00000016706 #23 KCTD9 (ENSMODG00000016711) #24 DOCK5 (ENSMODG00000016721) #26 NEFL (ENSMODG00000016731) #27 ENSMODG00000016740 ENSMODG00000016755 #29 ADAMDEC1 (ENSMODG00000016762) #30 ADAM28 (ENSMODG00000016767) #31 ENSMODG00000042259 STC1 (ENSMODG00000016782) #32 ENSMODG00000016788 NKX3-1 (ENSMODG00000016789) #34 ENSMODG00000016791 #35 ENSMODG00000038949 #35 ENTPD4 (ENSMODG00000016799) #37 Platypus MODERN SPECIES 16 GFPT1 (ENSOANG00000022684) ANTXR1 (ENSOANG00000049516) BMP10 (ENSOANG00000013884) ARHGAP25 (ENSOANG00000042047) ENSOANG00000048653 ENSOANG00000047428 ENSOANG00000036867 SLC23A2 (ENSOANG00000046766) RASSF2 (ENSOANG00000050398) ENSOANG00000047340 PRNP (ENSOANG00000045653) LRRTM4 (ENSOANG00000001430) ADRA1A (ENSOANG00000047360) #16 DPYSL2 (ENSOANG00000039496) #18 PPP2R2A (ENSOANG00000041383) #21 EBF2 (ENSOANG00000037491) #22 ENSOANG00000031714 #23 KCTD9 (ENSOANG00000000499) #24 ENSOANG00000037092 DOCK5 (ENSOANG00000014390) #26 NEFL (ENSOANG00000009794) #27 ENSOANG00000038027 Sauria ANCESTRAL SPECIES 27 ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000158877 ENSGT00390000004965 ENSGT00390000008694.b.b ENSGT00950000182953.C.c ENSGT00940000158546 ENSGT00510000049083.b ENSGT00940000154909 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000159140.d ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT00940000172945 ENSGT01100000263540.B.d #37 ENSGT00940000155874 Lepidosauria ANCESTRAL SPECIES 88 ENSGT00940000154909 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00960000187172 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000159140.d ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT00940000172945 ENSGT01100000263540.B.d #37 ENSGT00940000155874 ENSGT00530000063711.a tuatara MODERN SPECIES 1571 ADRA1A (ENSSPUG00000013492) #16 DPYSL2 (ENSSPUG00000013440) #18 ENSSPUG00000013412 #20 PPP2R2A (ENSSPUG00000013396) #21 EBF2 (ENSSPUG00000013384) #22 Episquamata ANCESTRAL SPECIES 12 ENSGT00940000155477 ENSGT00940000164321 ENSGT00730000111133 ENSGT00940000158936 ENSGT00980000199378 ENSGT00940000156808 ENSGT00940000159772 ENSGT00950000185671 ENSGT00510000049083.a.a ENSGT00510000049083.a.b ENSGT00940000154909 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00960000187172 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT00940000172945 ENSGT01100000263540.B.d #37 ENSGT00940000155874 ENSGT00530000063711.a ENSGT00940000157037.b.b Laterata ANCESTRAL SPECIES 15 ENSGT00940000155477 ENSGT00940000164321 ENSGT00730000111133 ENSGT00940000158936 ENSGT00980000199378 ENSGT00940000156808 ENSGT00940000159772 ENSGT00950000185671 ENSGT00510000049083.a.a ENSGT00510000049083.a.b ENSGT00940000154909 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000170702 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 ENSGT00530000063711.a ENSGT00940000157037.b.b ENSGT00720000108860 Common wall lizard MODERN SPECIES 6 DDHD2 (ENSPMRG00000014189) PLPP5 (ENSPMRG00000014218) ENSPMRG00000014224 ENSPMRG00000014229 ENSPMRG00000014267 ENSPMRG00000014272 LRRTM4 (ENSPMRG00000014281) ENSPMRG00000014289 ENSPMRG00000014295 ADRA1A (ENSPMRG00000014316) #16 ENSPMRG00000014325 DPYSL2 (ENSPMRG00000014333) #18 BNIP3L (ENSPMRG00000014354) #20 ENSPMRG00000014370 #21 ENSPMRG00000014394 EBF2 (ENSPMRG00000014453) #22 ENSPMRG00000014568 KCTD9 (ENSPMRG00000014576) #24 ENSPMRG00000014587 DOCK5 (ENSPMRG00000015038) #26 NEFL (ENSPMRG00000017204) #27 NEFM (ENSPMRG00000017209) #28 ADAM28 (ENSPMRG00000017231) #31 ENSPMRG00000017268 STC1 (ENSPMRG00000017272) #32 ENSPMRG00000017279 NKX3-1 (ENSPMRG00000017285) #34 SLC25A37 (ENSPMRG00000017292) #35 ENTPD4 (ENSPMRG00000017312) #37 ENSPMRG00000017342 LOXL2 (ENSPMRG00000017343) Argentine black and white tegu MODERN SPECIES 42 FDXACB1 (ENSSMRG00000021294) ALG9 (ENSSMRG00000021293) ENSSMRG00000021292 ENSSMRG00000021291 SIK2 (ENSSMRG00000021290) LAYN (ENSSMRG00000021289) HOATZ (ENSSMRG00000021288) ENSSMRG00000021287 LRRTM4 (ENSSMRG00000021286) ADRA1A (ENSSMRG00000021285) #16 DPYSL2 (ENSSMRG00000021283) #18 BNIP3L (ENSSMRG00000021282) #20 PPP2R2A (ENSSMRG00000021281) #21 ENSSMRG00000021280 ##22 ENSSMRG00000021279 EBF2 (ENSSMRG00000021083) #22 ENSSMRG00000021076 ENSSMRG00000021074 #24 GNRH1 (ENSSMRG00000021072) #25 DOCK5 (ENSSMRG00000021066) #26 NEFL (ENSSMRG00000021062) #27 ENSSMRG00000021061 ADAM28 (ENSSMRG00000021057) #31 STC1 (ENSSMRG00000021051) #32 NKX3-1 (ENSSMRG00000021050) #34 ENSSMRG00000021049 SLC25A37 (ENSSMRG00000021048) #35 ENTPD4 (ENSSMRG00000021046) #37 LOXL2 (ENSSMRG00000021043) R3HCC1 (ENSSMRG00000021041) Toxicofera ANCESTRAL SPECIES 20 ENSGT00390000010474 ENSGT00940000155477 ENSGT00940000164321 ENSGT00730000111133 ENSGT00940000158936 ENSGT00940000156808 ENSGT00940000159772 ENSGT00950000185671 ENSGT00510000049083.a.a ENSGT00510000049083.a.b ENSGT00940000154909 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00960000187172 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT00940000172945 ENSGT01100000263540.B.d #37 ENSGT00940000155874 ENSGT00530000063711.a ENSGT00940000157037.b.b Elapidae ANCESTRAL SPECIES 15 ENSGT00940000155477 ENSGT00940000164321 ENSGT00730000111133 ENSGT00940000158936 ENSGT00940000156808 ENSGT00940000159772 ENSGT00950000185671 ENSGT00510000049083.a.a ENSGT00510000049083.a.b ENSGT01090000262429 ENSGT00940000154909 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000156716.d #31 ENSGT00940000156716.c #31 ENSGT00390000005989.b #32 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 ENSGT00530000063711.a ENSGT00940000157037.b.b ENSGT00720000108860 Elapidae_a ANCESTRAL SPECIES 42 ENSGT00940000155477 ENSGT00940000164321 ENSGT00730000111133 ENSGT00940000158936 ENSGT00940000156808 ENSGT00940000159772 ENSGT00950000185671 ENSGT00510000049083.a.a ENSGT00510000049083.a.b ENSGT01090000262429 ENSGT00940000154909 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000156716.d #31 ENSGT00940000156716.c #31 ENSGT00390000005989.b #32 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874.e ENSGT00530000063711.a ENSGT00940000157037.b.b ENSGT00720000108860 Acanthophiinae ANCESTRAL SPECIES 54 ENSGT00940000164321 ENSGT00730000111133 ENSGT00940000158936 ENSGT00940000156808 ENSGT00940000159772.a ENSGT00940000159772.b ENSGT00950000185671 ENSGT00510000049083.a.a ENSGT00510000049083.a.b ENSGT01090000262429 ENSGT00940000154909 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT01100000264337 ENSGT00940000161685.A.a Eastern brown snake DUPLICATION Eastern brown snake MODERN SPECIES 74 ENSPTXG00000011287 ENSPTXG00000011289 ENSPTXG00000011291 ENSPTXG00000011294 #16 ENSPTXG00000011295 #18 ENSPTXG00000011300 #20 ENSPTXG00000011302 #21 ENSPTXG00000011305 #22 ENSPTXG00000011310 #24 ENSPTXG00000011312 #25 ENSPTXG00000011323 #26 ENSPTXG00000011740 #27 ENSPTXG00000011741 ENSPTXG00000011742 ENSPTXG00000011743 #31 ENSPTXG00000011746 #31 ENSPTXG00000011748 #32 NKX3-1 (ENSPTXG00000011750) #34 ENSPTXG00000011751 #35 ENSPTXG00000011752 #37 ENSPTXG00000011756 ENSPTXG00000011854 ENSPTXG00000011857 Eastern brown snake MODERN SPECIES 73 ENSPTXG00000007242 ENSPTXG00000007243 ENSPTXG00000007244 #16 ENSPTXG00000007246 #18 ENSPTXG00000008701 #20 ENSPTXG00000008702 #21 ENSPTXG00000008703 #22 ENSPTXG00000008704 #24 ENSPTXG00000008706 #25 ENSPTXG00000008715 #26 ENSPTXG00000009152 #27 ENSPTXG00000009153 ENSPTXG00000009159 ENSPTXG00000009160 #31 ENSPTXG00000009161 #31 ENSPTXG00000009164 #32 ENSPTXG00000009165 #35 ENSPTXG00000009167 #37 ENSPTXG00000009172 ENSPTXG00000009429 ENSPTXG00000009431 ENSPTXG00000008323 Mainland tiger snake MODERN SPECIES 37 ENSNSUG00000000852 ENSNSUG00000000843 LSM1 (ENSNSUG00000000840) BAG4 (ENSNSUG00000000839) DDHD2 (ENSNSUG00000000387) ENSNSUG00000000376 ENSNSUG00000000370 ENSNSUG00000000368 ENSNSUG00000000367 ENSNSUG00000000366 LRRTM4 (ENSNSUG00000000364) ADRA1A (ENSNSUG00000000362) #16 DPYSL2 (ENSNSUG00000000209) #18 BNIP3L (ENSNSUG00000000192) #20 PPP2R2A (ENSNSUG00000000180) #21 EBF2 (ENSNSUG00000000106) #22 KCTD9 (ENSNSUG00000000027) #24 GNRH1 (ENSNSUG00000018479) #25 DOCK5 (ENSNSUG00000018426) #26 NEFL (ENSNSUG00000018423) #27 ENSNSUG00000018422 ENSNSUG00000018418 Blue-lipped sea krait MODERN SPECIES 258 EBF2 (ENSLLTG00000006713) #22 ENSLLTG00000006686 Indian cobra MODERN SPECIES 7 STAR (ENSNNAG00000003969) ENSNNAG00000003952 ENSNNAG00000003917 LSM1 (ENSNNAG00000003883) ENSNNAG00000003865 DDHD2 (ENSNNAG00000003793) PLPP5 (ENSNNAG00000003729) ENSNNAG00000003717 ENSNNAG00000003697 ENSNNAG00000003681 LRRTM4 (ENSNNAG00000003671) ADRA1A (ENSNNAG00000003650) #16 DPYSL2 (ENSNNAG00000003606) #18 BNIP3L (ENSNNAG00000003562) #20 PPP2R2A (ENSNNAG00000003524) #21 EBF2 (ENSNNAG00000011189) #22 KCTD9 (ENSNNAG00000011148) #24 GNRH1 (ENSNNAG00000011126) #25 DOCK5 (ENSNNAG00000010814) #26 NEFL (ENSNNAG00000010763) #27 ENSNNAG00000010639 ZAR1L (ENSNNAG00000010606) ENSNNAG00000010003 #31 ENSNNAG00000009894 #31 STC1 (ENSNNAG00000009856) #32 NKX3-1 (ENSNNAG00000009833) #34 SLC25A37 (ENSNNAG00000009806) #35 ENTPD4 (ENSNNAG00000009746) #37 LOXL2 (ENSNNAG00000009688) R3HCC1 (ENSNNAG00000009647) ENSNNAG00000009630 Lizard DUPLICATION Lizard MODERN SPECIES 1057 ADRA1A (ENSACAG00000006376) #16 DPYSL2 (ENSACAG00000006159) #18 ENSACAG00000035783 BNIP3L (ENSACAG00000006113) #20 PPP2R2A (ENSACAG00000005972) #21 ENSACAG00000005898 #22 ENSACAG00000037573 Lizard MODERN SPECIES 1034 ENSACAG00000010823 #22 ENSACAG00000028695 KCTD9 (ENSACAG00000010866) #24 ENSACAG00000038279 DOCK5 (ENSACAG00000010981) #26 NEFL (ENSACAG00000011170) #27 ENSACAG00000011359 ENSACAG00000041047 #31 ENSACAG00000011969 #32 Archelosauria ANCESTRAL SPECIES 29 ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000158877 ENSGT00390000004965 ENSGT00390000008694.b.b ENSGT00950000182953.C.c ENSGT00940000158546 ENSGT00510000049083.b ENSGT00940000154909 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 ENSGT00530000063711.a ENSGT00940000157037.b.b Cryptodira ANCESTRAL SPECIES 30 ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000158877 ENSGT00390000004965 ENSGT00390000008694.b.b ENSGT00950000182953.C.c ENSGT00940000158546 ENSGT00510000049083.b ENSGT00940000154909 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 ENSGT00530000063711.a ENSGT00940000157037.b.b ENSGT00720000108860 Testudinoidea ANCESTRAL SPECIES ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000158877 ENSGT00390000004965 ENSGT00390000008694.b.b ENSGT00950000182953.C.c ENSGT00940000158546 ENSGT00950000185671 ENSGT00510000049083.b ENSGT00940000154909 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 ENSGT00530000063711.a ENSGT00940000157037.b.b ENSGT00720000108860 Testudinidae ANCESTRAL SPECIES 31 ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000158877 ENSGT00390000004965 ENSGT00390000008694.b.b ENSGT00950000182953.C.c ENSGT00940000158546 ENSGT00950000185671 ENSGT00510000049083.b ENSGT00940000154909 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00960000187172 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 ENSGT00530000063711.a ENSGT00940000157037.b.b ENSGT00720000108860 Goode s thornscrub tortoise MODERN SPECIES 11 ENSGEVG00005009028 BMP10 (ENSGEVG00005009140) ARHGAP25 (ENSGEVG00005009174) CDS2 (ENSGEVG00005009211) PCNA (ENSGEVG00005009251) TMEM230 (ENSGEVG00005009280) SLC23A2 (ENSGEVG00005009317) RASSF2 (ENSGEVG00005009388) ENSGEVG00005009439 PRNP (ENSGEVG00005009453) LRRTM4 (ENSGEVG00005009480) ADRA1A (ENSGEVG00005009508) #16 DPYSL2 (ENSGEVG00005009589) #18 BNIP3L (ENSGEVG00005009903) #20 PPP2R2A (ENSGEVG00005009996) #21 EBF2 (ENSGEVG00005010045) #22 ENSGEVG00005010331 KCTD9 (ENSGEVG00005010357) #24 GNRH1 (ENSGEVG00005010375) #25 DOCK5 (ENSGEVG00005010465) #26 NEFL (ENSGEVG00005011350) #27 ENSGEVG00005011397 ADAM28 (ENSGEVG00005011467) #31 STC1 (ENSGEVG00005011653) #32 ENSGEVG00005011714 NKX3-1 (ENSGEVG00005011757) #34 SLC25A37 (ENSGEVG00005011795) #35 ENTPD4 (ENSGEVG00005011820) #37 LOXL2 (ENSGEVG00005011963) R3HCC1 (ENSGEVG00005012692) ENSGEVG00005012706 Abingdon island giant tortoise MODERN SPECIES 123 ADRA1A (ENSCABG00000020453) #16 DPYSL2 (ENSCABG00000020451) #18 BNIP3L (ENSCABG00000020441) #20 PPP2R2A (ENSCABG00000020418) #21 EBF2 (ENSCABG00000020416) #22 KCTD9 (ENSCABG00000020402) #24 GNRH1 (ENSCABG00000020396) #25 DOCK5 (ENSCABG00000020382) #26 Emydidae ANCESTRAL SPECIES ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000158877 ENSGT00390000004965 ENSGT00390000008694.b.b ENSGT00950000182953.C.c ENSGT00940000158546 ENSGT00950000185671 ENSGT00510000049083.b ENSGT00940000154909 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 ENSGT00530000063711.a ENSGT00940000157037.b.b ENSGT00720000108860 painted turtle MODERN SPECIES 709 ENSCPBG00000003176 BMP10 (ENSCPBG00000003155) ARHGAP25 (ENSCPBG00000003140) CDS2 (ENSCPBG00000003128) PCNA (ENSCPBG00000003114) TMEM230 (ENSCPBG00000003096) SLC23A2 (ENSCPBG00000003065) RASSF2 (ENSCPBG00000003027) ENSCPBG00000003000 ENSCPBG00000002949 LRRTM4 (ENSCPBG00000002935) ADRA1A (ENSCPBG00000002911) #16 DPYSL2 (ENSCPBG00000002884) #18 BNIP3L (ENSCPBG00000002862) #20 PPP2R2A (ENSCPBG00000002853) #21 EBF2 (ENSCPBG00000002840) #22 ENSCPBG00000002813 #23 KCTD9 (ENSCPBG00000002787) #24 ENSCPBG00000002771 GNRH1 (ENSCPBG00000002762) #25 DOCK5 (ENSCPBG00000002708) #26 NEFL (ENSCPBG00000002688) #27 ENSCPBG00000002682 ADAM28 (ENSCPBG00000002623) #31 STC1 (ENSCPBG00000002608) #32 ENSCPBG00000002598 NKX3-1 (ENSCPBG00000002587) #34 SLC25A37 (ENSCPBG00000002576) #35 ENTPD4 (ENSCPBG00000002559) #37 LOXL2 (ENSCPBG00000002524) ENSCPBG00000002505 Three-toed box turtle MODERN SPECIES 20 ENSTMTG00000005575 BMP10 (ENSTMTG00000005616) ARHGAP25 (ENSTMTG00000005632) CDS2 (ENSTMTG00000005654) PCNA (ENSTMTG00000005686) TMEM230 (ENSTMTG00000005698) SLC23A2 (ENSTMTG00000005719) RASSF2 (ENSTMTG00000005745) ENSTMTG00000005779 PRNP (ENSTMTG00000005787) LRRTM4 (ENSTMTG00000005796) ADRA1A (ENSTMTG00000005814) #16 DPYSL2 (ENSTMTG00000006130) #18 BNIP3L (ENSTMTG00000010506) #20 PPP2R2A (ENSTMTG00000010521) #21 EBF2 (ENSTMTG00000010564) #22 ENSTMTG00000010696 KCTD9 (ENSTMTG00000010704) #24 GNRH1 (ENSTMTG00000010733) #25 DOCK5 (ENSTMTG00000010858) #26 NEFL (ENSTMTG00000011838) #27 ENSTMTG00000011860 ENSTMTG00000011868 #31 STC1 (ENSTMTG00000011903) #32 ENSTMTG00000011938 NKX3-1 (ENSTMTG00000011955) #34 SLC25A37 (ENSTMTG00000011973) #35 ENTPD4 (ENSTMTG00000011987) #37 LOXL2 (ENSTMTG00000012011) ENSTMTG00000012028 ENSTMTG00000012039 Chinese turtle MODERN SPECIES 378 LRRTM4 (ENSPSIG00000001033) ADRA1A (ENSPSIG00000016055) #16 DPYSL2 (ENSPSIG00000016087) #18 BNIP3L (ENSPSIG00000016631) #20 PPP2R2A (ENSPSIG00000016785) #21 EBF2 (ENSPSIG00000016837) #22 CDCA2 (ENSPSIG00000017605) #23 KCTD9 (ENSPSIG00000017621) #24 GNRH1 (ENSPSIG00000006525) #25 DOCK5 (ENSPSIG00000006576) #26 NEFL (ENSPSIG00000010803) #27 ENSPSIG00000010878 Archosauria ANCESTRAL SPECIES 30 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000158877 ENSGT00390000004965 ENSGT00390000008694.b.b ENSGT00950000182953.C.c ENSGT00940000158546 ENSGT00510000049083.b ENSGT00940000154909 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 ENSGT00530000063711.a ENSGT00940000157037.b.b Australian saltwater crocodile MODERN SPECIES 1 ENSCPRG00005014096 ZMIZ2 (ENSCPRG00005014106) OGDH (ENSCPRG00005014134) ENSCPRG00005014148 ADRA1A (ENSCPRG00005014150) #16 DPYSL2 (ENSCPRG00005014154) #18 BNIP3L (ENSCPRG00005014164) #20 PPP2R2A (ENSCPRG00005014169) #21 EBF2 (ENSCPRG00005014176) #22 ENSCPRG00005014182 #23 KCTD9 (ENSCPRG00005014183) #24 GNRH1 (ENSCPRG00005014185) #25 DOCK5 (ENSCPRG00005014187) #26 NEFL (ENSCPRG00005014205) #27 ENSCPRG00005014206 ADAM28 (ENSCPRG00005014210) #31 STC1 (ENSCPRG00005014220) #32 ENSCPRG00005014221 ENSCPRG00005014225 #35 ENSCPRG00005014226 #35 ENTPD4 (ENSCPRG00005014227) #37 LOXL2 (ENSCPRG00005014244) R3HCC1 (ENSCPRG00005014476) ENSCPRG00005014487 Aves ANCESTRAL SPECIES 30 ENSGT00940000156317 ENSGT00940000160547 ENSGT00940000159885 ENSGT00530000064017.b ENSGT00940000154966 ENSGT00940000158670 ENSGT00390000005154.t ENSGT00390000005154.s.a ENSGT00940000157856 ENSGT00510000046985 ENSGT00940000154909 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 ENSGT00530000063711.a ENSGT00940000157037.b.b African ostrich MODERN SPECIES 291 MXD1 (ENSSCUG00000002223) C2orf42 (ENSSCUG00000002213) TIA1 (ENSSCUG00000002188) PCYOX1 (ENSSCUG00000002184) SNRPG (ENSSCUG00000002183) LRRTM4 (ENSSCUG00000002182) ADRA1A (ENSSCUG00000002179) #16 PPP2R2A (ENSSCUG00000002162) #21 EBF2 (ENSSCUG00000002156) #22 ENSSCUG00000002152 #23 KCTD9 (ENSSCUG00000002150) #24 GNRH1 (ENSSCUG00000002147) #25 ENSSCUG00000002144 DOCK5 (ENSSCUG00000002136) #26 NEFL (ENSSCUG00000002125) #27 ENSSCUG00000002124 ENSSCUG00000002121 ADAM28 (ENSSCUG00000002115) #31 STC1 (ENSSCUG00000002106) #32 ENSSCUG00000002102 SLC25A37 (ENSSCUG00000002096) #35 ENTPD4 (ENSSCUG00000002092) #37 LOXL2 (ENSSCUG00000002089) R3HCC1 (ENSSCUG00000002087) Neognathae ANCESTRAL SPECIES 33 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000158877 ENSGT00390000004965 ENSGT00390000008694.b.b ENSGT00950000182953.C.c ENSGT00940000158546 ENSGT00510000049083.b ENSGT00940000154909 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 ENSGT00530000063711.a ENSGT00940000157037.b.b Galloanserae ANCESTRAL SPECIES 32 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000158877 ENSGT00390000004965 ENSGT00390000008694.b.b ENSGT00950000182953.C.c ENSGT00940000158546 ENSGT00510000049083.b ENSGT00940000154909 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 ENSGT00530000063711.a ENSGT00940000157037.b.b ENSGT00720000108860 Phasianidae ANCESTRAL SPECIES 31 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000158877 ENSGT00390000004965 ENSGT00390000008694.b.b ENSGT00950000182953.C.c ENSGT00940000158546 ENSGT00510000049083.b ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 ENSGT00530000063711.a ENSGT00940000157037.b.b ENSGT00720000108860 Japanese quail MODERN SPECIES 14 ANTXR1 (ENSCJPG00005011971) ENSCJPG00005011972 GKN2 (ENSCJPG00005011974) BMP10 (ENSCJPG00005011975) ARHGAP25 (ENSCJPG00005011976) CDS2 (ENSCJPG00005011977) PCNA (ENSCJPG00005011978) TMEM230 (ENSCJPG00005011979) SLC23A2 (ENSCJPG00005011980) RASSF2 (ENSCJPG00005011981) PRNP (ENSCJPG00005011982) PROM2 (ENSCJPG00005011983) DPYSL2 (ENSCJPG00005011984) #18 BNIP3L (ENSCJPG00005011985) #20 PPP2R2A (ENSCJPG00005011988) #21 EBF2 (ENSCJPG00005011991) #22 ENSCJPG00005012174 KCTD9 (ENSCJPG00005012175) #24 GNRH1 (ENSCJPG00005012176) #25 DOCK5 (ENSCJPG00005012183) #26 NEFL (ENSCJPG00005015112) #27 ENSCJPG00005015113 ADAM28 (ENSCJPG00005015114) #31 STC1 (ENSCJPG00005015115) #32 ENSCJPG00005015116 #34 SLC25A37 (ENSCJPG00005015117) #35 ENTPD4 (ENSCJPG00005015118) #37 LOXL2 (ENSCJPG00005015119) R3HCC1 (ENSCJPG00005015120) CHMP7 (ENSCJPG00005015121) ENSCJPG00005015122 Phasianidae_b ANCESTRAL SPECIES 36 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000158877 ENSGT00390000004965 ENSGT00390000008694.b.b ENSGT00950000182953.C.c ENSGT00940000158546 ENSGT00510000049083.b ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 ENSGT00530000063711.a ENSGT00940000157037.b.b ENSGT00720000108860 Turkey DUPLICATION Turkey MODERN SPECIES 16 ENSMGAG00000015582 ENSMGAG00000001356 ENSMGAG00000001314 ENSMGAG00000001293 #37 ENSMGAG00000001276 #35 ENSMGAG00000001268 ENSMGAG00000001210 #32 ENSMGAG00000001087 #31 ENSMGAG00000020068 #31 ENSMGAG00000001031 #27 ENSMGAG00000001059 ENSMGAG00000000866 #26 ENSMGAG00000000821 #23 ENSMGAG00000000831 #24 GNRH1 (ENSMGAG00000000861) #25 ENSMGAG00000000791 #22 ENSMGAG00000021648 #22 ENSMGAG00000019257 ENSMGAG00000000768 #21 ENSMGAG00000021581 #20 ENSMGAG00000000713 ENSMGAG00000017950 ENSMGAG00000000727 ENSMGAG00000000749 #18 ENSMGAG00000000698 ENSMGAG00000000684 ENSMGAG00000000693 ENSMGAG00000000665 CDS2 (ENSMGAG00000000669) BMP10 (ENSMGAG00000020909) ANTXR1 (ENSMGAG00000000654) Turkey MODERN SPECIES 16 ENSMGAG00000001356 ENSMGAG00000001314 ENSMGAG00000001293 #37 ENSMGAG00000001276 #35 ENSMGAG00000001268 ENSMGAG00000001210 #32 ENSMGAG00000001087 #31 ENSMGAG00000020068 #31 ENSMGAG00000001031 #27 ENSMGAG00000001059 ENSMGAG00000000866 #26 ENSMGAG00000000821 #23 ENSMGAG00000000831 #24 GNRH1 (ENSMGAG00000000861) #25 ENSMGAG00000000791 #22 ENSMGAG00000021648 #22 ENSMGAG00000019257 ENSMGAG00000000768 #21 ENSMGAG00000021581 #20 ENSMGAG00000000713 ENSMGAG00000017950 ENSMGAG00000000727 ENSMGAG00000000749 #18 ENSMGAG00000000698 ENSMGAG00000000684 ENSMGAG00000000693 ENSMGAG00000000665 CDS2 (ENSMGAG00000000669) BMP10 (ENSMGAG00000020909) ANTXR1 (ENSMGAG00000000654) ENSMGAG00000000661 Chicken MODERN SPECIES 14 ANTXR1 (ENSGALG00010017671) GKN1 (ENSGALG00010020264) GKN2 (ENSGALG00010019314) BMP10 (ENSGALG00010020231) ARHGAP25 (ENSGALG00010020323) CDS2 (ENSGALG00010020362) PCNA (ENSGALG00010020374) TMEM230 (ENSGALG00010020377) SLC23A2 (ENSGALG00010020392) RASSF2 (ENSGALG00010018233) PRNP (ENSGALG00010018261) PROM2 (ENSGALG00010018273) DPYSL2 (ENSGALG00010018309) #18 BNIP3L (ENSGALG00010018342) #20 PPP2R2A (ENSGALG00010018438) #21 EBF2 (ENSGALG00010018726) #22 ENSGALG00010018862 CDCA2 (ENSGALG00010018865) #23 KCTD9 (ENSGALG00010018872) #24 GNRH1 (ENSGALG00010018891) #25 DOCK5 (ENSGALG00010018915) #26 NEFL (ENSGALG00010018944) #27 NEFM (ENSGALG00010018973) ADAM28 (ENSGALG00010019012) #31 STC1 (ENSGALG00010019097) #32 NKX2-6 (ENSGALG00010020189) NKX3-1 (ENSGALG00010020201) #34 SLC25A37 (ENSGALG00010020244) #35 ENTPD4 (ENSGALG00010019355) #37 LOXL2 (ENSGALG00010020025) R3HCC1 (ENSGALG00010020055) Anatidae ANCESTRAL SPECIES 53 ENSGT00940000159446 ENSGT00390000011031 ENSGT00940000154962.A ENSGT00390000011206.a ENSGT00510000046985 ENSGT00390000006707 ENSGT00940000154909 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000157556 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 ENSGT00530000063711.a ENSGT00940000157037.b.b Duck MODERN SPECIES 14 BMP10 (ENSAPLG00000016219) ARHGAP25 (ENSAPLG00000016184) CDS2 (ENSAPLG00000016097) PCNA (ENSAPLG00000022945) TMEM230 (ENSAPLG00000016058) SLC23A2 (ENSAPLG00000015862) RASSF2 (ENSAPLG00000015822) PROM2 (ENSAPLG00000015738) TIA1 (ENSAPLG00000009953) ENSAPLG00000026556 LRRTM4 (ENSAPLG00000002047) ADRA1A (ENSAPLG00000007432) #16 DPYSL2 (ENSAPLG00000007595) #18 BNIP3L (ENSAPLG00000008709) #20 PPP2R2A (ENSAPLG00000008811) #21 EBF2 (ENSAPLG00000009260) #22 ENSAPLG00000024715 #23 KCTD9 (ENSAPLG00000009567) #24 GNRH1 (ENSAPLG00000009893) #25 DOCK5 (ENSAPLG00000010000) #26 NEFL (ENSAPLG00000028546) #27 ENSAPLG00000019722 ENSAPLG00000012861 STC1 (ENSAPLG00000014693) #32 ADAM28 (ENSAPLG00000013050) #31 NKX3-1 (ENSAPLG00000028169) #34 ENTPD4 (ENSAPLG00000014823) #37 LOXL2 (ENSAPLG00000006034) ENSAPLG00000006017 RHOBTB2 (ENSAPLG00000005141) ENSAPLG00000028005 Pink-footed goose DUPLICATION Pink-footed goose MODERN SPECIES 148 MXD1 (ENSABRG00000019829) C2orf42 (ENSABRG00000019826) TIA1 (ENSABRG00000019777) PCYOX1 (ENSABRG00000019771) SNRPG (ENSABRG00000019767) ENSABRG00000019766 LRRTM4 (ENSABRG00000019759) ADRA1A (ENSABRG00000019738) #16 DPYSL2 (ENSABRG00000019732) #18 BNIP3L (ENSABRG00000019720) #20 PPP2R2A (ENSABRG00000019712) #21 ENSABRG00000019708 #22 ENSABRG00000019700 #22 ENSABRG00000019687 #23 KCTD9 (ENSABRG00000019677) #24 GNRH1 (ENSABRG00000019675) #25 DOCK5 (ENSABRG00000018224) #26 NEFL (ENSABRG00000018141) #27 ENSABRG00000018139 ADAM28 (ENSABRG00000018129) #31 STC1 (ENSABRG00000018125) #32 ENSABRG00000018122 NKX3-1 (ENSABRG00000018119) #34 SLC25A37 (ENSABRG00000018116) #35 ENTPD4 (ENSABRG00000018111) #37 LOXL2 (ENSABRG00000018099) R3HCC1 (ENSABRG00000018096) ENSABRG00000018093 Pink-footed goose MODERN SPECIES 148 MXD1 (ENSABRG00000019829) C2orf42 (ENSABRG00000019826) TIA1 (ENSABRG00000019777) PCYOX1 (ENSABRG00000019771) SNRPG (ENSABRG00000019767) ENSABRG00000019766 LRRTM4 (ENSABRG00000019759) ADRA1A (ENSABRG00000019738) #16 DPYSL2 (ENSABRG00000019732) #18 BNIP3L (ENSABRG00000019720) #20 PPP2R2A (ENSABRG00000019712) #21 ENSABRG00000019708 #22 ENSABRG00000019700 #22 ENSABRG00000019687 #23 KCTD9 (ENSABRG00000019677) #24 GNRH1 (ENSABRG00000019675) #25 DOCK5 (ENSABRG00000018224) #26 NEFL (ENSABRG00000018141) #27 ENSABRG00000018139 ADAM28 (ENSABRG00000018129) #31 STC1 (ENSABRG00000018125) #32 ENSABRG00000018122 NKX3-1 (ENSABRG00000018119) #34 SLC25A37 (ENSABRG00000018116) #35 ENTPD4 (ENSABRG00000018111) #37 LOXL2 (ENSABRG00000018099) R3HCC1 (ENSABRG00000018096) Neognathae_b ANCESTRAL SPECIES 28 ENSGT00440000033552 ENSGT00940000159299 ENSGT00730000111237 ENSGT00940000159446 ENSGT00390000011031 ENSGT00940000154962.A ENSGT00390000011206.a ENSGT00510000046985 ENSGT00390000006707 ENSGT00940000160058 ENSGT00940000154909 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 ENSGT00530000063711.a ENSGT00940000157037.b.b Passeriformes ANCESTRAL SPECIES 26 ENSGT00940000154966 ENSGT00940000158670 ENSGT00390000005154.s.a ENSGT00940000157856 ENSGT00390000011031 ENSGT00940000154962.A ENSGT00390000011206.a ENSGT00510000046985 ENSGT00390000006707 ENSGT00940000160058 ENSGT00940000154909 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000162737 #33 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 ENSGT00530000063711.a ENSGT00940000157037.b.b Passeriformes_d ANCESTRAL SPECIES 30 ENSGT00940000154966 ENSGT00940000158670 ENSGT00390000005154.s.a ENSGT00940000157856 ENSGT00390000011031 ENSGT00940000154962.A.r ENSGT00390000011206.a ENSGT00510000046985 ENSGT00390000006707 ENSGT00940000160058 ENSGT00940000154909 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a.h #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 ENSGT00530000063711.a.k ENSGT00940000157037.b.b ENSGT00530000063711.a.l Flycatcher MODERN SPECIES 14 ENSFALG00000024960 ENSFALG00000024974 ENSFALG00000024570 ENSFALG00000024733 ENSFALG00000008322 ENSFALG00000024274 PCYOX1 (ENSFALG00000008352) SNRPG (ENSFALG00000008384) ENSFALG00000014930 ENSFALG00000011349 ENSFALG00000025071 ADRA1A (ENSFALG00000011334) #16 ENSFALG00000011296 #18 BNIP3L (ENSFALG00000023027) #20 PPP2R2A (ENSFALG00000025527) #21 EBF2 (ENSFALG00000011234) #22 KCTD9 (ENSFALG00000028013) #24 GNRH1 (ENSFALG00000011190) #25 DOCK5 (ENSFALG00000011176) #26 NEFL (ENSFALG00000011160) #27 ENSFALG00000011150 ADAM28 (ENSFALG00000011137) #31 STC1 (ENSFALG00000011130) #32 ENSFALG00000015342 NKX3-1 (ENSFALG00000028347) #34 SLC25A37 (ENSFALG00000011115) #35 ENSFALG00000022939 ENTPD4 (ENSFALG00000023188) #37 ENSFALG00000011108 LOXL2 (ENSFALG00000011070) ENSFALG00000024066 Passeriformes_g ANCESTRAL SPECIES 33 ENSGT00950000182943.kb.b.a.b.b ENSGT00940000159012.ab ENSGT00550000074946 ENSGT00940000159904 ENSGT00390000011031 ENSGT00940000154962.A.r.b ENSGT00390000011206.a ENSGT00510000046985 ENSGT00390000006707 ENSGT00940000160058 ENSGT00940000154909 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a.h #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000160930 #34 ENSGT01060000249641 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 ENSGT00530000063711.a.k ENSGT00940000157037.b.b Medium ground finch MODERN SPECIES 217 ADRA1A (ENSGFOG00000013981) #16 DPYSL2 (ENSGFOG00000013979) #18 BNIP3L (ENSGFOG00000013977) #20 PPP2R2A (ENSGFOG00000013976) #21 EBF2 (ENSGFOG00000013975) #22 ENSGFOG00000013972 #23 KCTD9 (ENSGFOG00000013969) #24 GNRH1 (ENSGFOG00000013967) #25 DOCK5 (ENSGFOG00000012725) #26 NEFL (ENSGFOG00000012553) #27 ENSGFOG00000012548 ENSGFOG00000012545 #31 STC1 (ENSGFOG00000012542) #32 NKX3-1 (ENSGFOG00000012539) #34 ENSGFOG00000012538 SLC25A37 (ENSGFOG00000012536) #35 ENTPD4 (ENSGFOG00000012535) #37 Passeroidea ANCESTRAL SPECIES 31 ENSGT00940000154966 ENSGT00940000158670 ENSGT00390000005154.s.a ENSGT00940000157856 ENSGT00390000011031 ENSGT00940000154962.A.r.a ENSGT00390000011206.a ENSGT00510000046985 ENSGT00390000006707 ENSGT00940000160058 ENSGT00940000154909 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a.h #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT01060000249641 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 ENSGT00530000063711.a.k ENSGT00940000157037.b.b ENSGT00720000108860 Zebra finch MODERN SPECIES 15 ENSTGUG00000020524 ENSTGUG00000027637 ENSTGUG00000019520 ENSTGUG00000022358 ENSTGUG00000021177 ENSTGUG00000017307 ENSTGUG00000023851 ENSTGUG00000029105 ENSTGUG00000023568 SNRPG (ENSTGUG00000004149) LRRTM4 (ENSTGUG00000004157) ADRA1A (ENSTGUG00000004160) #16 DPYSL2 (ENSTGUG00000004168) #18 BNIP3L (ENSTGUG00000020038) #20 PPP2R2A (ENSTGUG00000004235) #21 EBF2 (ENSTGUG00000004267) #22 ENSTGUG00000028331 #23 KCTD9 (ENSTGUG00000004348) #24 GNRH1 (ENSTGUG00000004367) #25 DOCK5 (ENSTGUG00000004369) #26 NEFL (ENSTGUG00000004464) #27 ENSTGUG00000004494 ADAM28 (ENSTGUG00000004505) #31 STC1 (ENSTGUG00000028600) #32 ENSTGUG00000021541 SLC25A37 (ENSTGUG00000025934) #35 ENTPD4 (ENSTGUG00000017284) #37 LOXL2 (ENSTGUG00000017286) R3HCC1 (ENSTGUG00000020064) ENSTGUG00000021644 CHMP7 (ENSTGUG00000017288) Common canary MODERN SPECIES 50 ADRA1A (ENSSCAG00000017145) #16 DPYSL2 (ENSSCAG00000017143) #18 BNIP3L (ENSSCAG00000017138) #20 PPP2R2A (ENSSCAG00000017129) #21 EBF2 (ENSSCAG00000017126) #22 ENSSCAG00000017124 KCTD9 (ENSSCAG00000017122) #24 GNRH1 (ENSSCAG00000017120) #25 DOCK5 (ENSSCAG00000017108) #26 ENSSCAG00000017105 STC1 (ENSSCAG00000017102) #32 ENSSCAG00000017101 ENSSCAG00000017100 ENSSCAG00000017098 #35 NEFL (ENSSCAG00000017093) #27 ENSSCAG00000017091 ENSSCAG00000017089 #31 UNC5D (ENSSCAG00000017086) ENSSCAG00000017083 ENSSCAG00000017081 Great tit MODERN SPECIES 14 STAMBP (ENSPMJG00000015788) ACTG2 (ENSPMJG00000015791) ENSPMJG00000015792 C2orf42 (ENSPMJG00000015793) ENSPMJG00000015819 ENSPMJG00000015820 PCYOX1 (ENSPMJG00000015821) SNRPG (ENSPMJG00000015822) ENSPMJG00000015824 LRRTM4 (ENSPMJG00000015826) ADRA1A (ENSPMJG00000015830) #16 DPYSL2 (ENSPMJG00000015831) #18 BNIP3L (ENSPMJG00000015832) #20 PPP2R2A (ENSPMJG00000015834) #21 ENSPMJG00000015835 EBF2 (ENSPMJG00000015836) #22 ENSPMJG00000015838 #23 KCTD9 (ENSPMJG00000015839) #24 GNRH1 (ENSPMJG00000015843) #25 DOCK5 (ENSPMJG00000015905) #26 NEFL (ENSPMJG00000017732) #27 ENSPMJG00000017733 ADAM28 (ENSPMJG00000017734) #31 STC1 (ENSPMJG00000017735) #32 NKX2-6 (ENSPMJG00000017736) #33 NKX3-1 (ENSPMJG00000017737) #34 SLC25A37 (ENSPMJG00000017738) #35 ENTPD4 (ENSPMJG00000017740) #37 LOXL2 (ENSPMJG00000017742) R3HCC1 (ENSPMJG00000017743) ENSPMJG00000017744 Neognathae_c ANCESTRAL SPECIES 30 ENSGT00440000033552 ENSGT00940000159299 ENSGT00730000111237 ENSGT00940000159446 ENSGT00390000011031 ENSGT00940000154962.A ENSGT00390000011206.a ENSGT00510000046985 ENSGT00390000006707 ENSGT00940000160058 ENSGT00940000154909 ENSGT00940000159105 #16 ENSGT01030000234527.A.a.b.a.a #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.a #21 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000154352.A #23 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000156716 #31 ENSGT00390000005989.b #32 ENSGT00940000160930 #34 ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 ENSGT00530000063711.a ENSGT00940000157037.b.b ENSGT00720000108860 Golden eagle MODERN SPECIES 4 TMED4 (ENSACCG00020009529) DDX56 (ENSACCG00020009504) NPC1L1 (ENSACCG00020009363) ENSACCG00020009152 C2orf42 (ENSACCG00020009129) TIA1 (ENSACCG00020009086) PCYOX1 (ENSACCG00020009055) SNRPG (ENSACCG00020009043) FAM136A (ENSACCG00020009033) TGFA (ENSACCG00020009017) LRRTM4 (ENSACCG00020008990) ADRA1A (ENSACCG00020008983) #16 DPYSL2 (ENSACCG00020008944) #18 BNIP3L (ENSACCG00020008907) #20 PPP2R2A (ENSACCG00020008869) #21 EBF2 (ENSACCG00020008815) #22 KCTD9 (ENSACCG00020008775) #24 GNRH1 (ENSACCG00020008754) #25 DOCK5 (ENSACCG00020008101) #26 NEFL (ENSACCG00020007193) #27 ENSACCG00020007176 ADAM28 (ENSACCG00020007154) #31 STC1 (ENSACCG00020007143) #32 ENSACCG00020007127 NKX3-1 (ENSACCG00020007121) #34 SLC25A37 (ENSACCG00020007110) #35 ENTPD4 (ENSACCG00020007093) #37 LOXL2 (ENSACCG00020007060) R3HCC1 (ENSACCG00020007034) ENSACCG00020007019 CHMP7 (ENSACCG00020007000) Kakapo MODERN SPECIES 14 ENSSHBG00005012035 GPAT4 (ENSSHBG00005000748) NKX6-3 (ENSSHBG00005000754) ENSSHBG00005000758 ANK1 (ENSSHBG00005005769) KAT6A (ENSSHBG00005006175) AP3M2 (ENSSHBG00005006241) PLAT (ENSSHBG00005006275) IKBKB (ENSSHBG00005006488) VDAC3 (ENSSHBG00005007059) POLB (ENSSHBG00005007095) ADRA1A (ENSSHBG00005007111) #16 DPYSL2 (ENSSHBG00005007213) #18 BNIP3L (ENSSHBG00005007265) #20 PPP2R2A (ENSSHBG00005007294) #21 EBF2 (ENSSHBG00005007343) #22 ENSSHBG00005007388 #23 KCTD9 (ENSSHBG00005007428) #24 GNRH1 (ENSSHBG00005007515) #25 DOCK5 (ENSSHBG00005007942) #26 NEFL (ENSSHBG00005008568) #27 ENSSHBG00005008574 ENSSHBG00005008576 ADAM28 (ENSSHBG00005008594) #31 STC1 (ENSSHBG00005008617) #32 ENSSHBG00005008627 SLC25A37 (ENSSHBG00005008635) #35 ENTPD4 (ENSSHBG00005008643) #37 LOXL2 (ENSSHBG00005008682) R3HCC1 (ENSSHBG00005009137) ENSSHBG00005009149 Anura ANCESTRAL SPECIES 30 ENSGT00390000016333 ENSGT00940000153139.B.a ENSGT00940000159868 ENSGT00940000158603.f ENSGT00940000155068.b ENSGT00940000159352 ENSGT00390000003878 ENSGT00390000012859 ENSGT00940000158663 ENSGT00950000183082.b.a ENSGT00940000161454.i.b.b ENSGT01060000248581.E.d.b.a.b.a.a ENSGT01030000234527.A.a.b.a.a.n #18 ENSGT00390000013415.a.b #20 ENSGT00950000182864.a.b.b.b ##21 ENSGT00950000182859.A.a.a.b #22 ENSGT00960000187172 ENSGT00940000154314 #24 ENSGT00390000008225 #25 ENSGT00940000157734 #26 ENSGT00940000156208 #27 ENSGT00940000161685.A.a ENSGT00940000156716.a.a #31 ENSGT00940000156716.b #31 ENSGT00940000156716.a.b #31 ENSGT00390000005989.b #32 ENSGT00940000165452.b ENSGT00940000158607 #35 ENSGT01100000263540.B.d #37 ENSGT00940000155874 ENSGT00940000179863 Frog MODERN SPECIES 3 ENSXETG00000039498 ENSXETG00000046753 ENSXETG00000042638 ENSXETG00000048894 ENSXETG00000042357 ENSXETG00000038456 ENSXETG00000043011 ENSXETG00000040350 ENSXETG00000035080 ENSXETG00000042507 ENSXETG00000043640 ENSXETG00000039632 dpysl2 (ENSXETG00000034346) #18 bnip3l (ENSXETG00000046362) #20 ppp2r2a (ENSXETG00000010159) ##21 ebf2 (ENSXETG00000010153) #22 cdca2 (ENSXETG00000033409) kctd9 (ENSXETG00000034350) #24 gnrh1 (ENSXETG00000010147) #25 dock5 (ENSXETG00000031383) #26 nefl (ENSXETG00000010142) #27 nefm (ENSXETG00000010128) adam28.1 (ENSXETG00000030278) #31 adam28.2 (ENSXETG00000031918) #31 ENSXETG00000036350 #31 ENSXETG00000040043 #31 ENSXETG00000039067 #31 ENSXETG00000043152 #31 ENSXETG00000036133 #31 ENSXETG00000040335 #31 ENSXETG00000032381 #31 Leishan spiny toad MODERN SPECIES 6 ENSLLEG00000018128 MAK16 (ENSLLEG00000018049) ENSLLEG00000018021 ENSLLEG00000017890 ENSLLEG00000017794 ENSLLEG00000017768 ENSLLEG00000017680 ENSLLEG00000017607 ENSLLEG00000017558 ENSLLEG00000017530 ENSLLEG00000016642 #18 ENSLLEG00000016564 ENSLLEG00000016538 BNIP3L (ENSLLEG00000016427) #20 ENSLLEG00000015793 ##21 EBF2 (ENSLLEG00000015288) #22 ENSLLEG00000015043 KCTD9 (ENSLLEG00000014581) #24 DOCK5 (ENSLLEG00000014183) #26 NEFL (ENSLLEG00000014130) #27 ENSLLEG00000013987 ENSLLEG00000013422 #31 ENSLLEG00000012998 #31 ENSLLEG00000012950 ENSLLEG00000012926 STC1 (ENSLLEG00000012894) #32 ENSLLEG00000012872 NKX3-1 (ENSLLEG00000012849) #34 SLC25A37 (ENSLLEG00000012777) #35 ENTPD4 (ENSLLEG00000012420) #37 ENSLLEG00000012314 Coelacanth MODERN SPECIES 332 ENSLACG00000017847 DPYSL2 (ENSLACG00000017733) #18 BNIP3L (ENSLACG00000017677) #20 PPP2R2A (ENSLACG00000017581) #21 TMEM230 (ENSLACG00000017549) EBF2 (ENSLACG00000017271) #22 KCTD9 (ENSLACG00000016937) #24 GNRH1 (ENSLACG00000016897) #25 DOCK5 (ENSLACG00000016696) #26 NEFL (ENSLACG00000016495) #27 ENSLACG00000016414 ADAM28 (ENSLACG00000015824) #31 ENSLACG00000015689 STC1 (ENSLACG00000014878) #32 ENSLACG00000014473 SLC25A37 (ENSLACG00000014043) #35 ENTPD4 (ENSLACG00000013528) #37 LOXL2 (ENSLACG00000012041) R3HCC1 (ENSLACG00000011894) GOLGA7 (ENSLACG00000011323) sfrp1b (ENSLACG00000009826) Actinopterygii ANCESTRAL SPECIES 436 ENSGT00950000183185.c.a.a ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000161711 ENSGT00940000156009.A ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760 ENSGT00940000168975 Neopterygii ANCESTRAL SPECIES 361 ENSGT00950000183185.c.a.a ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000161711 ENSGT00940000156009.A ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760 ENSGT00940000168975 Osteoglossocephalai ANCESTRAL SPECIES 5 ENSGT00940000157987 ENSGT00730000112955 ENSGT00390000005772 ENSGT00530000063370.b ENSGT00530000063869.B ENSGT00940000154495.b.b.a ENSGT00940000161655 ENSGT00940000154284.b ENSGT00940000177369 ENSGT00940000156855.c ENSGT00950000183185.c.a.a ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000168975 ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT01050000244898.b.a ENSGT00940000164825 ENSGT00390000009670 ENSGT00940000153849.a.a.a ENSGT00940000153849.a.b ENSGT00500000044984 ENSGT00390000012759 ENSGT00940000155149 ENSGT00940000155449 ENSGT00940000163293.c.b Clupeocephala ANCESTRAL SPECIES 22 ENSGT00940000157987 ENSGT00730000112955 ENSGT00390000005772 ENSGT00530000063370.b ENSGT00530000063869.B ENSGT00940000154495.b.b.a ENSGT00940000161655 ENSGT00940000154284.b ENSGT00940000177369 ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000168975 ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT01050000244898.b.a ENSGT00940000164825 ENSGT00390000009670 ENSGT00940000153849.a.a.a ENSGT00390000012759 ENSGT00940000163293.c.a ENSGT00940000160182 ENSGT00940000157897.b ENSGT00940000153594.c.e.a ENSGT00390000007883 Otomorpha ANCESTRAL SPECIES 443 ENSGT00940000155760.t.a ENSGT00940000163919.a ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.u ENSGT00940000156009.A.c ENSGT00390000007992 ENSGT00390000001901 ENSGT00950000183185.c.a.a.bb.a.b ENSGT00940000156855.c ENSGT00940000154284.b ENSGT00940000161655 Otophysi ANCESTRAL SPECIES 256 ENSGT00940000153594.c.e.a ENSGT00940000157897.b ENSGT00940000160182 ENSGT00940000163293.c.a ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00940000159627 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000163919.a ENSGT00940000164890.b ENSGT00390000007992 ENSGT00390000001901 ENSGT00950000183185.c.a.a.bb.a.b ENSGT00940000156855.c ENSGT00940000177369 ENSGT00940000154284.b ENSGT00940000161655 ENSGT00940000155998 ENSGT00490000043385 ENSGT00940000156859 Characiphysae ANCESTRAL SPECIES 129 ENSGT00940000153594.c.e.a ENSGT00940000157897.b ENSGT00940000160182 ENSGT00940000163293.c.a ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00940000159627 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000163919.a ENSGT00940000164890.b ENSGT00390000007992 ENSGT00390000001901 ENSGT00950000183185.c.a.a.bb.a.b ENSGT00940000156855.c ENSGT00940000177369 ENSGT00940000154284.b ENSGT00940000161655 ENSGT00940000155998 ENSGT00490000043385 ENSGT00940000153241.A.cb ENSGT00390000001803 ENSGT00940000158691 Channel catfish MODERN SPECIES 14 ssh1 (ENSIPUG00000021080) DAO (ENSIPUG00000021057) SVOP (ENSIPUG00000020994) ENSIPUG00000020947 ENSIPUG00000020935 HECTD4 (ENSIPUG00000020876) SDS (ENSIPUG00000020866) HIP1R (ENSIPUG00000020815) kmt5ab (ENSIPUG00000020804) rilpl2 (ENSIPUG00000020800) mtrfr (ENSIPUG00000020793) arl6ip4 (ENSIPUG00000020789) MTHFD2 (ENSIPUG00000020776) mob1a (ENSIPUG00000020754) dguok (ENSIPUG00000020750) ebf2 (ENSIPUG00000020735) #22 ank1a (ENSIPUG00000020684) spaw (ENSIPUG00000020679) usp39 (ENSIPUG00000020671) c22h2orf68 (ENSIPUG00000020652) MAT2A (ENSIPUG00000020619) INPP5J (ENSIPUG00000020611) selenom (ENSIPUG00000020604) ENSIPUG00000020584 ENSIPUG00000020568 CCNO (ENSIPUG00000020561) isca1 (ENSIPUG00000020544) psat1 (ENSIPUG00000020490) sra1 (ENSIPUG00000020481) mlxip (ENSIPUG00000020430) ung (ENSIPUG00000020417) Characiphysae_b ANCESTRAL SPECIES 183 ENSGT00940000153594.c.e.a ENSGT00940000157897.b ENSGT00940000160182 ENSGT00940000163293.c.a ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00940000159627 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000163919.a ENSGT00940000164890.b ENSGT00390000007992 ENSGT00390000001901 ENSGT00950000183185.c.a.a.bb.a.b ENSGT00940000156855.c ENSGT00940000177369 ENSGT00940000154284.b ENSGT00940000161655 Electric eel MODERN SPECIES 269 psmb7 (ENSEEEG00000010340) NEK6 (ENSEEEG00000010267) DENND1A (ENSEEEG00000010110) hip1rb (ENSEEEG00000010085) rilpl2 (ENSEEEG00000010083) kmt5ab (ENSEEEG00000010082) CDK2AP1 (ENSEEEG00000010078) mtrfr (ENSEEEG00000010077) PITPNM2 (ENSEEEG00000009838) arl6ip4 (ENSEEEG00000009829) mthfd2 (ENSEEEG00000009823) mob1a (ENSEEEG00000009801) dguok (ENSEEEG00000009800) ebf2 (ENSEEEG00000009793) #22 ank1a (ENSEEEG00000004856) spaw (ENSEEEG00000004736) sftpbb (ENSEEEG00000004732) usp39 (ENSEEEG00000004583) si:ch211-283h6.4 (ENSEEEG00000004574) mat2ab (ENSEEEG00000004573) INPP5J (ENSEEEG00000004572) selenom (ENSEEEG00000004571) ENSEEEG00000004569 Characoidei ANCESTRAL SPECIES 222 ENSGT00940000153594.c.e.a ENSGT00940000157897.b ENSGT00940000160182 ENSGT00940000163293.c.a ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00940000159627 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000163919.a ENSGT00940000164890.b ENSGT00390000007992 ENSGT00390000001901 ENSGT00950000183185.c.a.a.bb.a.b ENSGT00940000156855.c ENSGT00940000177369 ENSGT00940000154284.b ENSGT00940000161655 Red-bellied piranha MODERN SPECIES 271 eif2b1 (ENSPNAG00000020198) tmed2 (ENSPNAG00000003636) vps33a (ENSPNAG00000020114) zcchc8 (ENSPNAG00000020069) hip1rb (ENSPNAG00000020044) RILPL1 (ENSPNAG00000019828) rilpl2 (ENSPNAG00000019819) kmt5ab (ENSPNAG00000019801) CDK2AP1 (ENSPNAG00000019785) mtrfr (ENSPNAG00000019769) PITPNM2 (ENSPNAG00000019721) arl6ip4 (ENSPNAG00000019444) mthfd2 (ENSPNAG00000019432) mob1a (ENSPNAG00000019380) dguok (ENSPNAG00000019358) ebf2 (ENSPNAG00000019339) #22 ank1a (ENSPNAG00000019240) ENSPNAG00000018858 ENSPNAG00000018845 usp39 (ENSPNAG00000018831) si:ch211-283h6.4 (ENSPNAG00000018774) mat2ab (ENSPNAG00000018750) INPP5J (ENSPNAG00000018716) ENSPNAG00000003549 selenom (ENSPNAG00000018679) SMTN (ENSPNAG00000018622) Mexicana tetra MODERN SPECIES 124 mthfd2 (ENSAMXG00000009018) mob1a (ENSAMXG00000031172) dguok (ENSAMXG00000019832) ENSAMXG00000036760 ebf2 (ENSAMXG00000021198) #22 ank1a (ENSAMXG00000021179) ENSAMXG00000036948 spaw (ENSAMXG00000021167) sftpbb (ENSAMXG00000021161) usp39 (ENSAMXG00000021157) ENSAMXG00000038290 mat2ab (ENSAMXG00000032698) ENSAMXG00000035124 ENSAMXG00000038733 Cyprinoidei ANCESTRAL SPECIES 145 ENSGT00940000158691 ENSGT00390000003405 ENSGT00920000149180.b ENSGT00950000182859.A.a.a.b #22 ENSGT00390000008142 ENSGT00940000158617 ENSGT00940000168076 ENSGT00940000159458 ENSGT00940000158378 ENSGT00940000157596 ENSGT00940000160838 ENSGT00940000164978.b ENSGT00940000153322.B.d.b ENSGT00940000159385.a.b ENSGT01030000234788 ENSGT00390000017765.a ENSGT00940000154361.A ENSGT00390000014424 ENSGT00940000155647.bb Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 521 ENSGT00940000167701.b.d ENSGT00390000010028.r ENSGT00940000155122.a.b ENSGT00390000011475.f ENSGT00730000111142.k ENSGT00940000158691.b ENSGT00390000003405.q.b ENSGT00920000149180.b.f ENSGT00950000182859.A.a.a.b.q #22 ENSGT00940000162883.t ENSGT00940000165599.C.b ENSGT00390000008142 ENSGT00940000158617.g.a ENSGT00940000159458.h ENSGT00940000158378.d ENSGT00940000157596.e ENSGT00940000164978.b.a ENSGT00940000153322.B.d.b.a ENSGT00940000159385.a.b.a ENSGT00390000017765.a.a ENSGT00940000154361.A.c Goldfish MODERN SPECIES 44 ENSCARG00000002914 ENSCARG00000002916 KCNAB3 (ENSCARG00000002935) slc25a11 (ENSCARG00000003014) spag7 (ENSCARG00000003023) ENSCARG00000003037 gtf3aa (ENSCARG00000003048) ENSCARG00000003064 ENSCARG00000003066 CLIP1 (ENSCARG00000003081) ENSCARG00000003110 rsrc2 (ENSCARG00000003141) mlxip (ENSCARG00000003162) sebox (ENSCARG00000003189) unga (ENSCARG00000003198) ebf2 (ENSCARG00000003227) #22 si:dkey-251i10.2 (ENSCARG00000003285) si:dkey-251i10.3 (ENSCARG00000003325) zbtb20 (ENSCARG00000003693) ENSCARG00000003712 b4galt4 (ENSCARG00000003732) CASR (ENSCARG00000003748) zgc:175280 (ENSCARG00000003769) si:ch211-271b14.1 (ENSCARG00000003777) tagln3a (ENSCARG00000003785) rom1a (ENSCARG00000003791) RPS6KA4 (ENSCARG00000004035) FLRT1 (ENSCARG00000005110) stip1 (ENSCARG00000005151) FERMT3 (ENSCARG00000005378) kat5b (ENSCARG00000005915) Cyprininae_a ANCESTRAL SPECIES 360 ENSGT00390000001777.f ENSGT00940000163054.g.a ENSGT00390000013444.a.b.b.a.a ENSGT00940000154911.z ENSGT00940000159375.c.a.f ENSGT00940000161083.f ENSGT00940000159921.c.a ENSGT00940000167701.b.d ENSGT00390000010028.r ENSGT00940000155122.a.b ENSGT00390000011475.f ENSGT00730000111142.k ENSGT00940000158691.b ENSGT00390000003405.q.b ENSGT00920000149180.b.f ENSGT00950000182859.A.a.a.b.q #22 ENSGT00940000162883.t ENSGT00940000165599.C.b ENSGT00390000008142 ENSGT00940000158617.g.a ENSGT00940000159458.h ENSGT00940000158378.d ENSGT00940000157596.e ENSGT00940000160838 ENSGT00940000164978.b.a ENSGT00940000153322.B.d.b.a ENSGT00940000159385.a.b.a Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 617 unga (ENSSGRG00000033819) sebox (ENSSGRG00000033821) ENSSGRG00000033822 sebox (ENSSGRG00000033823) ebf2 (ENSSGRG00000033825) #22 ebf2 (ENSSGRG00000033828) #22 ENSSGRG00000033832 si:dkey-251i10.2 (ENSSGRG00000033905) si:dkey-251i10.3 (ENSSGRG00000033907) ENSSGRG00000034076 zbtb20 (ENSSGRG00000034078) ENSSGRG00000034081 b4galt4 (ENSSGRG00000034084) CASR (ENSSGRG00000034088) eif4e1b (ENSSGRG00000034121) zgc:175280 (ENSSGRG00000034123) ENSSGRG00000034124 ENSSGRG00000034125 abhd10a (ENSSGRG00000034126) gtf3aa (ENSSGRG00000034128) ENSSGRG00000034130 Golden-line barbel MODERN SPECIES 617 unga (ENSSGRG00000033819) sebox (ENSSGRG00000033821) ENSSGRG00000033822 sebox (ENSSGRG00000033823) ebf2 (ENSSGRG00000033825) #22 ebf2 (ENSSGRG00000033828) #22 ENSSGRG00000033832 si:dkey-251i10.2 (ENSSGRG00000033905) si:dkey-251i10.3 (ENSSGRG00000033907) ENSSGRG00000034076 zbtb20 (ENSSGRG00000034078) ENSSGRG00000034081 b4galt4 (ENSSGRG00000034084) CASR (ENSSGRG00000034088) eif4e1b (ENSSGRG00000034121) zgc:175280 (ENSSGRG00000034123) ENSSGRG00000034124 ENSSGRG00000034125 abhd10a (ENSSGRG00000034126) gtf3aa (ENSSGRG00000034128) Common carp reference MODERN SPECIES 7 ENSCCRG00000056484 ENSCCRG00000077329 kat5b (ENSCCRG00000031080) FERMT3 (ENSCCRG00000011105) stip1 (ENSCCRG00000032172) FLRT1 (ENSCCRG00000063342) ENSCCRG00000049684 rom1a (ENSCCRG00000049676) ENSCCRG00000069018 CLIP1 (ENSCCRG00000072316) ENSCCRG00000041075 rsrc2 (ENSCCRG00000041079) mlxip (ENSCCRG00000042989) unga (ENSCCRG00000080554) sebox (ENSCCRG00000043330) ebf2 (ENSCCRG00000043349) #22 si:dkey-251i10.2 (ENSCCRG00000021227) si:dkey-251i10.3 (ENSCCRG00000002692) zbtb20 (ENSCCRG00000060681) ENSCCRG00000054973 b4galt4 (ENSCCRG00000053945) ENSCCRG00000051265 eif4e1b (ENSCCRG00000051287) zgc:175280 (ENSCCRG00000064799) si:ch211-271b14.1 (ENSCCRG00000067858) tagln3a (ENSCCRG00000069923) abhd10a (ENSCCRG00000078286) gsx1 (ENSCCRG00000072294) gtf3aa (ENSCCRG00000020574) ENSCCRG00000066279 ENSCCRG00000029932 Cyprininae ANCESTRAL SPECIES 700 ENSGT00940000159375.c.a.e ENSGT00940000161083.e ENSGT00940000159921.c.b ENSGT00940000167701.b.c ENSGT00390000010028.q ENSGT00940000155122.a.a ENSGT00390000011475.e ENSGT00730000111142.l ENSGT00940000158691.a ENSGT00390000003405.q.a ENSGT00920000149180.b.e ENSGT00950000182859.A.a.a.b.r #22 Goldfish MODERN SPECIES 869 zcchc8 (ENSCARG00000032755) ENSCARG00000032744 rsrc2 (ENSCARG00000032730) mlxip (ENSCARG00000032540) unga (ENSCARG00000032481) sebox (ENSCARG00000032471) ebf2 (ENSCARG00000032449) #22 Cyprininae_a ANCESTRAL SPECIES 63 ENSGT00940000158691.a ENSGT00390000003405.q.a ENSGT00920000149180.b.e ENSGT00950000182859.A.a.a.b.r #22 ENSGT00940000165599.C.a ENSGT00940000158617.g.b ENSGT00940000159458.g ENSGT00940000158378.c ENSGT00940000157596.f ENSGT00940000164978.b.b ENSGT00940000153322.B.d.b.b ENSGT00940000159385.a.b.b ENSGT01030000234788 ENSGT00390000017765.a.b ENSGT00940000154361.A.d ENSGT00390000014424 ENSGT00940000155647.bb.f ENSGT00950000182962.a.a.c ENSGT00940000163061.d Common carp reference MODERN SPECIES 15 stip1 (ENSCCRG00000011094) ENSCCRG00000069719 ENSCCRG00000072869 ENSCCRG00000079265 ENSCCRG00000076297 FLRT1 (ENSCCRG00000070750) rps6ka4 (ENSCCRG00000038326) rom1a (ENSCCRG00000038743) ENSCCRG00000066125 cdca5 (ENSCCRG00000041625) ENSCCRG00000041619 zcchc8 (ENSCCRG00000057356) ENSCCRG00000041609 mlxip (ENSCCRG00000063893) sebox (ENSCCRG00000038210) ebf2 (ENSCCRG00000074012) #22 ENSCCRG00000078722 si:dkey-251i10.2 (ENSCCRG00000057026) zbtb20 (ENSCCRG00000080567) ENSCCRG00000071737 b4galt4 (ENSCCRG00000024175) ENSCCRG00000024180 eif4e1b (ENSCCRG00000049401) zgc:175280 (ENSCCRG00000049394) tagln3a (ENSCCRG00000053618) ENSCCRG00000009490 abhd10a (ENSCCRG00000070229) ENSCCRG00000048423 gsx1 (ENSCCRG00000071353) mtif3 (ENSCCRG00000011595) ENSCCRG00000070498 Golden-line barbel MODERN SPECIES 718 mlxip (ENSSGRG00000015186) unga (ENSSGRG00000015187) ebf2 (ENSSGRG00000015188) #22 SLC25A5 (ENSSGRG00000015189) si:dkey-251i10.2 (ENSSGRG00000015193) ENSSGRG00000015195 zbtb20 (ENSSGRG00000015196) ARHGAP31 (ENSSGRG00000015197) CASR (ENSSGRG00000015200) eif4e1b (ENSSGRG00000015206) ENSSGRG00000015208 zgc:175280 (ENSSGRG00000015209) si:ch211-271b14.1 (ENSSGRG00000015210) ENSSGRG00000015211 abhd10a (ENSSGRG00000015212) gsx1 (ENSSGRG00000015213) mtif3 (ENSSGRG00000015215) gtf3aa (ENSSGRG00000015216) Zebrafish MODERN SPECIES 20 MN1 (ENSDARG00000079248) kat5b (ENSDARG00000045951) FERMT3 (ENSDARG00000079267) ENSDARG00000112159 stip1 (ENSDARG00000004906) rps6ka4 (ENSDARG00000044436) rom1a (ENSDARG00000019752) cdca5 (ENSDARG00000044437) CLIP1 (ENSDARG00000078722) zcchc8 (ENSDARG00000034982) si:ch211-110p13.9 (ENSDARG00000093821) rsrc2 (ENSDARG00000042534) mlxip (ENSDARG00000059474) unga (ENSDARG00000042527) sebox (ENSDARG00000042526) ebf2 (ENSDARG00000042525) #22 si:dkey-251i10.1 (ENSDARG00000042521) si:dkey-251i10.2 (ENSDARG00000093957) UTP14C (ENSDARG00000042520) zbtb20 (ENSDARG00000005586) ENSDARG00000093783 ENSDARG00000059472 b4galt4 (ENSDARG00000104042) CASR (ENSDARG00000013649) eif4e1b (ENSDARG00000014565) zgc:175280 (ENSDARG00000099111) si:ch211-271b14.1 (ENSDARG00000101808) tagln3a (ENSDARG00000079805) abhd10a (ENSDARG00000076435) gsx1 (ENSDARG00000035735) mtif3 (ENSDARG00000039649) Clupeiformes ANCESTRAL SPECIES 182 ENSGT00940000156901.B ENSGT00920000149159 ENSGT00950000183083.a.d.b ENSGT00940000158510 ENSGT00390000013287 ENSGT01100000265558 ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181.c.a ENSGT00940000161055 ENSGT00940000153434.c.a ENSGT00390000002374 ENSGT00940000169432 ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.u ENSGT00940000156009.A.c ENSGT00390000007992 ENSGT00390000001901 ENSGT00950000183185.c.a.a.bb.a.b ENSGT00940000156855.c ENSGT00940000156009.A.d ENSGT00950000183185.c.a.a.bb.a.a ENSGT00940000156855.d ENSGT00940000154495.b.b.b ENSGT00730000111291 ENSGT00940000166850 ENSGT00940000154191.k.b ENSGT00950000182881.a.b.a.a.b ENSGT00390000013929 Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 23 ENSCHAG00000019164 pcsk5b (ENSCHAG00000019210) rfk (ENSCHAG00000020946) FOXB2 (ENSCHAG00000020979) ENSCHAG00000021009 vps13a (ENSCHAG00000021136) GNA14 (ENSCHAG00000024349) CEP78 (ENSCHAG00000024356) naa35 (ENSCHAG00000024374) agtpbp1 (ENSCHAG00000024424) NTRK2 (ENSCHAG00000024697) rmi1 (ENSCHAG00000024700) hnrnpk (ENSCHAG00000024703) zgc:136564 (ENSCHAG00000024727) ENSCHAG00000024733 ebf2 (ENSCHAG00000000295) #22 ENSCHAG00000000329 #22 ank1a (ENSCHAG00000001526) ENSCHAG00000007028 ENSCHAG00000007056 spaw (ENSCHAG00000007069) ENSCHAG00000007080 ENSCHAG00000007278 ENSCHAG00000007438 ENSCHAG00000008153 ENSCHAG00000009381 usp39 (ENSCHAG00000009596) si:ch211-283h6.4 (ENSCHAG00000009765) mat2ab (ENSCHAG00000009786) ENSCHAG00000010224 ENSCHAG00000010399 Atlantic herring MODERN SPECIES 23 pcsk5b (ENSCHAG00000019210) rfk (ENSCHAG00000020946) FOXB2 (ENSCHAG00000020979) ENSCHAG00000021009 vps13a (ENSCHAG00000021136) GNA14 (ENSCHAG00000024349) CEP78 (ENSCHAG00000024356) naa35 (ENSCHAG00000024374) agtpbp1 (ENSCHAG00000024424) NTRK2 (ENSCHAG00000024697) rmi1 (ENSCHAG00000024700) hnrnpk (ENSCHAG00000024703) zgc:136564 (ENSCHAG00000024727) ENSCHAG00000024733 ebf2 (ENSCHAG00000000295) #22 ENSCHAG00000000329 #22 ank1a (ENSCHAG00000001526) ENSCHAG00000007028 ENSCHAG00000007056 spaw (ENSCHAG00000007069) ENSCHAG00000007080 ENSCHAG00000007278 ENSCHAG00000007438 ENSCHAG00000008153 ENSCHAG00000009381 usp39 (ENSCHAG00000009596) si:ch211-283h6.4 (ENSCHAG00000009765) mat2ab (ENSCHAG00000009786) ENSCHAG00000010224 ENSCHAG00000010399 selenom (ENSCHAG00000010416) Denticle herring MODERN SPECIES 43 ENSDCDG00000007173 ENSDCDG00000007188 ENSDCDG00000007214 naa35 (ENSDCDG00000007257) agtpbp1 (ENSDCDG00000007553) NTRK2 (ENSDCDG00000010895) rmi1 (ENSDCDG00000010904) zgc:136564 (ENSDCDG00000010916) ebf2 (ENSDCDG00000010933) #22 ENSDCDG00000010997 Euteleosteomorpha ANCESTRAL SPECIES 14 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.b.a ENSGT00940000161655 ENSGT00940000154284.b ENSGT00940000177369 ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000168975 ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000161716 ENSGT00940000154642.d Protacanthopterygii ANCESTRAL SPECIES 21 ENSGT00940000163293.c.a ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.a.a.a ENSGT00940000154284.b ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000168975 ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154642.d ENSGT00950000182881.a.b.a.a.a ENSGT00570000079101.b ENSGT00940000165952 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 13 ENSGT00940000160182.l ENSGT00940000163293.c.a.d ENSGT00940000155149.kc ENSGT00940000153849.a.a.a.a ENSGT00940000164825.h ENSGT01050000244898.b.a.u ENSGT00530000063869.B.l ENSGT00940000161655 ENSGT00940000156855.c.a ENSGT00950000183185.c.a.a.bb.a.b.j ENSGT00390000001901.a ENSGT00390000007992.g ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b.v #22 ENSGT00950000182859.A.a.a.b.u #22 ENSGT00940000155760.t.a.e ENSGT00940000168975 ENSGT00940000159932.a.e ENSGT00940000163919.a.e ENSGT00530000063370.b.d ENSGT00390000005772.l ENSGT00940000157987.k ENSGT00940000165465.d ENSGT00940000155991.z ENSGT00940000154849.b.i ENSGT00940000154191.k.a.g ENSGT00940000161716.fc.b ENSGT00940000154642.d ENSGT00950000182881.a.b.a.a.a.h ENSGT00940000165952 Huchen DUPLICATION Huchen DUPLICATION Huchen MODERN SPECIES 2479 ebf2 (ENSHHUG00000051844) #22 Huchen MODERN SPECIES 5352 ENSHHUG00000030693 #22 Huchen MODERN SPECIES 311 ENSHHUG00000030085 kmt5ab (ENSHHUG00000030075) PITPNM2 (ENSHHUG00000029973) arl6ip4 (ENSHHUG00000029968) mthfd2 (ENSHHUG00000029960) mob1a (ENSHHUG00000029935) trafd1 (ENSHHUG00000029928) ENSHHUG00000029921 ENSHHUG00000029897 selenom (ENSHHUG00000029889) INPP5J (ENSHHUG00000029879) mat2ab (ENSHHUG00000029728) si:ch211-283h6.4 (ENSHHUG00000029708) usp39 (ENSHHUG00000029700) sftpbb (ENSHHUG00000029694) ebf2 (ENSHHUG00000029690) #22 Salmoninae_a ANCESTRAL SPECIES 31 ENSGT00940000160182.k ENSGT00940000163293.c.a.c ENSGT00390000012759 ENSGT00940000153849.a.a.a.b ENSGT00390000009670 ENSGT00940000164825.g ENSGT01050000244898.b.a.v ENSGT00530000063869.B.k ENSGT00940000154495.b.b.a.a ENSGT00940000154284.b ENSGT00940000156855.c.b ENSGT00950000183185.c.a.a.bb.a.b.i ENSGT00390000001901.b ENSGT00390000007992.h ENSGT00940000177137 ENSGT00950000182859.A.a.a.b.u #22 ENSGT00940000155760.t.a.f ENSGT00940000159932.a.f ENSGT00940000163919.a.f ENSGT00940000159627 ENSGT00530000063370.b.c ENSGT00390000005772.k ENSGT00940000157987.l ENSGT00940000165465.c ENSGT00940000155991.y ENSGT00940000154849.b.j ENSGT00940000154191.k.a.h ENSGT00390000013711 ENSGT00940000161716.fc.a ENSGT00950000182881.a.b.a.a.a.g ENSGT00570000079101.b Salmo ANCESTRAL SPECIES 19 ENSGT00940000163293.c.a.c ENSGT00390000012759 ENSGT00940000153849.a.a.a.b ENSGT00390000009670.j ENSGT00940000164825.g ENSGT01050000244898.b.a.v ENSGT00530000063869.B.k ENSGT00940000154495.b.a.a.a.b ENSGT00940000154495.b.b.a.a ENSGT00940000154284.b ENSGT00940000156855.c.b ENSGT00950000183185.c.a.a.bb.a.b.i ENSGT00390000001901.b ENSGT00390000007992.h ENSGT00940000177137 ENSGT00950000182859.A.a.a.b.u #22 ENSGT00940000155760.t.a.f ENSGT00940000159932.a.f ENSGT00940000163919.a.f ENSGT00940000159627 ENSGT00530000063370.b.c ENSGT00390000005772.k ENSGT00940000157987.l ENSGT00940000165465.c ENSGT00940000155991.y ENSGT00940000154849.b.j ENSGT00940000154191.k.a.h ENSGT00940000168755 ENSGT00940000161716.fc.a ENSGT00950000182881.a.b.a.a.a.g ENSGT00570000079101.b Atlantic salmon MODERN SPECIES 12 ENSSSAG00000086712 kmt5ab (ENSSSAG00000077894) mtrfr (ENSSSAG00000114699) ENSSSAG00000077962 arl6ip4 (ENSSSAG00000078307) mthfd2 (ENSSSAG00000078312) mob1a (ENSSSAG00000113921) ENSSSAG00000096051 ENSSSAG00000078321 ENSSSAG00000084575 ENSSSAG00000113960 ENSSSAG00000078438 ENSSSAG00000119750 ENSSSAG00000078457 ENSSSAG00000078479 ENSSSAG00000078487 #22 ENSSSAG00000078696 ENSSSAG00000078817 ENSSSAG00000078805 ENSSSAG00000078812 osbp2b (ENSSSAG00000083409) rasl10a (ENSSSAG00000102699) ap1b1 (ENSSSAG00000045173) ENSSSAG00000115278 ENSSSAG00000054753 ENSSSAG00000054745 ENSSSAG00000054756 ENSSSAG00000054796 tctn2 (ENSSSAG00000055994) pik3ip1 (ENSSSAG00000104588) limk2 (ENSSSAG00000056048) River trout MODERN SPECIES 39 hip1rb (ENSSTUG00000015539) RILPL1 (ENSSTUG00000015748) rilpl2 (ENSSTUG00000015779) kmt5ab (ENSSTUG00000015790) mtrfr (ENSSTUG00000015831) PITPNM2 (ENSSTUG00000015984) arl6ip4 (ENSSTUG00000019351) mthfd2 (ENSSTUG00000019389) trafd1 (ENSSTUG00000019462) ENSSTUG00000019549 selenom (ENSSTUG00000019597) INPP5J (ENSSTUG00000019602) mat2ab (ENSSTUG00000019611) si:ch211-283h6.4 (ENSSTUG00000019696) usp39 (ENSSTUG00000019726) ebf2 (ENSSTUG00000020075) #22 ANK1 (ENSSTUG00000020287) ENSSTUG00000021063 ENSSTUG00000021069 dguok (ENSSTUG00000021071) tcn2 (ENSSTUG00000021080) ccdc117 (ENSSTUG00000021099) osbp2b (ENSSTUG00000021137) rasl10a (ENSSTUG00000021203) ap1b1 (ENSSTUG00000021717) ENSSTUG00000028834 ENSSTUG00000028852 ENSSTUG00000028888 ENSSTUG00000028896 ENSSTUG00000028909 atp6v0a2b (ENSSTUG00000028973) Oncorhynchus ANCESTRAL SPECIES 12 ENSGT00940000157897.b ENSGT00940000160182.k ENSGT00940000163293.c.a.c ENSGT00390000012759 ENSGT00940000153849.a.a.a.b ENSGT00390000009670 ENSGT00940000164825.g ENSGT01050000244898.b.a.v ENSGT00530000063869.B.k ENSGT00940000154495.b.b.a.a ENSGT00940000154284.b ENSGT00940000156855.c.b ENSGT00950000183185.c.a.a.bb.a.b.i ENSGT00390000001901.b ENSGT00390000007992.h ENSGT00950000182859.A.a.a.b.u #22 ENSGT00940000155760.t.a.f ENSGT00940000159932.a.f ENSGT00940000163919.a.f ENSGT00940000159627 ENSGT00530000063370.b.c ENSGT00390000005772.k ENSGT00940000157987.l ENSGT00940000165465.c ENSGT00940000155991.y ENSGT00940000154849.b.j ENSGT00940000154191.k.a.h ENSGT00390000013711 ENSGT00940000161716.fc.a ENSGT00950000182881.a.b.a.a.a.g ENSGT00570000079101.b Oncorhynchus_a ANCESTRAL SPECIES 15 ENSGT00940000160182.k ENSGT00940000163293.c.a.c ENSGT00390000012759 ENSGT00940000153849.a.a.a.b ENSGT00390000009670 ENSGT00940000164825.g ENSGT01050000244898.b.a.v ENSGT00530000063869.B.k ENSGT00940000154495.b.a.a.a.b ENSGT00940000154495.b.b.a.a ENSGT00940000154284.b ENSGT00940000156855.c.b ENSGT00950000183185.c.a.a.bb.a.b.i ENSGT00390000001901.b ENSGT00390000007992.h ENSGT00950000182859.A.a.a.b.u #22 ENSGT00940000155760.t.a.f ENSGT00940000159932.a.f ENSGT00940000163919.a.f ENSGT00940000159627 ENSGT00530000063370.b.c ENSGT00390000005772.k ENSGT00940000157987.l ENSGT00940000165465.c ENSGT00940000155991.y ENSGT00940000154849.b.j ENSGT00940000154191.k.a.h ENSGT00390000013711 ENSGT00940000161716.fc.a ENSGT00950000182881.a.b.a.a.a.g ENSGT00570000079101.b Coho salmon MODERN SPECIES 28 HIP1R (ENSOKIG00005004482) RILPL1 (ENSOKIG00005004222) rilpl2 (ENSOKIG00005004209) mtrfr (ENSOKIG00005004198) PITPNM2 (ENSOKIG00005004095) arl6ip4 (ENSOKIG00005004041) mthfd2 (ENSOKIG00005004018) mob1a (ENSOKIG00005003989) trafd1 (ENSOKIG00005003968) ENSOKIG00005003936 selenom (ENSOKIG00005003928) INPP5J (ENSOKIG00005003917) mat2ab (ENSOKIG00005003893) si:ch211-283h6.4 (ENSOKIG00005003885) usp39 (ENSOKIG00005003695) ebf2 (ENSOKIG00005003662) #22 ANK1 (ENSOKIG00005002253) ENSOKIG00005050883 ENSOKIG00005050882 dguok (ENSOKIG00005050881) tcn2 (ENSOKIG00005050880) ccdc117 (ENSOKIG00005050879) osbp2b (ENSOKIG00005050876) rasl10a (ENSOKIG00005050874) ap1b1 (ENSOKIG00005050804) ENSOKIG00005050722 ENSOKIG00005050713 ENSOKIG00005050710 ENSOKIG00005050705 atp6v0a2b (ENSOKIG00005050692) ENSOKIG00005050685 Chinook salmon MODERN SPECIES 3 rilpl2 (ENSOTSG00005028005) kmt5ab (ENSOTSG00005028002) ENSOTSG00005028000 mtrfr (ENSOTSG00005027998) PITPNM2 (ENSOTSG00005027997) arl6ip4 (ENSOTSG00005027994) mthfd2 (ENSOTSG00005027993) mob1a (ENSOTSG00005027990) trafd1 (ENSOTSG00005027988) ENSOTSG00005027987 selenom (ENSOTSG00005027986) INPP5J (ENSOTSG00005027983) mat2ab (ENSOTSG00005027980) si:ch211-283h6.4 (ENSOTSG00005027978) usp39 (ENSOTSG00005027973) ebf2 (ENSOTSG00005027968) #22 ANK1 (ENSOTSG00005027795) ENSOTSG00005027780 spaw (ENSOTSG00005027779) dguok (ENSOTSG00005027774) tcn2 (ENSOTSG00005027773) ccdc117 (ENSOTSG00005027771) osbp2b (ENSOTSG00005027770) cmklr1 (ENSOTSG00005027769) ENSOTSG00005027768 ficd (ENSOTSG00005027766) sart3 (ENSOTSG00005027309) si:ch211-191d15.2 (ENSOTSG00005027277) ENSOTSG00005027275 ENSOTSG00005027274 selplg (ENSOTSG00005027272) Rainbow trout MODERN SPECIES 2 mtrfr (ENSOMYG00000012830) ENSOMYG00000065308 ENSOMYG00000013076 arl6ip4 (ENSOMYG00000015866) mthfd2 (ENSOMYG00000015879) mob1a (ENSOMYG00000015896) ENSOMYG00000015930 ENSOMYG00000015944 selenom (ENSOMYG00000015958) ENSOMYG00000015968 ENSOMYG00000060185 mat2ab (ENSOMYG00000015990) ENSOMYG00000016103 ENSOMYG00000016120 ENSOMYG00000048901 ENSOMYG00000016198 #22 ENSOMYG00000016871 ENSOMYG00000017797 ENSOMYG00000017819 ENSOMYG00000017859 ENSOMYG00000017864 ENSOMYG00000054433 osbp2b (ENSOMYG00000017899) ENSOMYG00000051115 rasl10a (ENSOMYG00000017985) ap1b1 (ENSOMYG00000018182) ENSOMYG00000026411 ENSOMYG00000026421 rhbdd3 (ENSOMYG00000026439) ENSOMYG00000026451 ENSOMYG00000059046 Salmoninae ANCESTRAL SPECIES 13 ENSGT00940000153594.c.e.a.f ENSGT00940000160182.l ENSGT00940000163293.c.a.d ENSGT00940000155149.kc ENSGT00940000153849.a.a.a.a ENSGT00940000164825.h ENSGT01050000244898.b.a.u ENSGT00530000063869.B.l ENSGT00940000161655 ENSGT00940000156855.c.a ENSGT00950000183185.c.a.a.bb.a.b.j ENSGT00390000001901.a ENSGT00390000007992.g ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b.v #22 ENSGT00950000182859.A.a.a.b.u #22 ENSGT00940000155760.t.a.e ENSGT00940000168975 ENSGT00940000159932.a.e ENSGT00940000163919.a.e ENSGT00530000063370.b.d ENSGT00390000005772.l ENSGT00940000157987.k ENSGT00940000165465.d ENSGT00940000155991.z ENSGT00940000154849.b.i ENSGT00940000154191.k.a.g ENSGT00940000161716.fc.b ENSGT00940000154642.d ENSGT00950000182881.a.b.a.a.a.h Huchen DUPLICATION Huchen MODERN SPECIES 500 CDK2AP1 (ENSHHUG00000052889) PITPNM2 (ENSHHUG00000052884) arl6ip4 (ENSHHUG00000052881) mthfd2 (ENSHHUG00000052879) mob1a (ENSHHUG00000052877) trafd1 (ENSHHUG00000052869) ENSHHUG00000052863 INPP5J (ENSHHUG00000052862) MAT2A (ENSHHUG00000052857) si:ch211-283h6.4 (ENSHHUG00000052855) usp39 (ENSHHUG00000052854) sftpbb (ENSHHUG00000052846) ENSHHUG00000052845 ENSHHUG00000052844 ebf2 (ENSHHUG00000052843) #22 ebf2 (ENSHHUG00000052841) #22 Huchen MODERN SPECIES 500 rilpl2 (ENSHHUG00000052891) CDK2AP1 (ENSHHUG00000052889) PITPNM2 (ENSHHUG00000052884) arl6ip4 (ENSHHUG00000052881) mthfd2 (ENSHHUG00000052879) mob1a (ENSHHUG00000052877) trafd1 (ENSHHUG00000052869) ENSHHUG00000052863 INPP5J (ENSHHUG00000052862) MAT2A (ENSHHUG00000052857) si:ch211-283h6.4 (ENSHHUG00000052855) usp39 (ENSHHUG00000052854) sftpbb (ENSHHUG00000052846) ENSHHUG00000052845 ENSHHUG00000052844 ebf2 (ENSHHUG00000052843) #22 ebf2 (ENSHHUG00000052841) #22 Salmoninae_a ANCESTRAL SPECIES 10 ENSGT00940000153594.c.e.a.f ENSGT00940000160182.l ENSGT00940000163293.c.a.d ENSGT00940000155149.kc ENSGT00940000153849.a.a.a.a ENSGT00940000164825.h ENSGT01050000244898.b.a.u ENSGT00530000063869.B.l ENSGT00940000161655 ENSGT00990000210636 ENSGT00940000156855.c.a ENSGT00950000183185.c.a.a.bb.a.b.j ENSGT00390000001901.a ENSGT00390000007992.g ENSGT00940000164890.b ENSGT00950000182859.A.a.a.b.v #22 ENSGT00940000155760.t.a.e ENSGT00940000168975 ENSGT00940000159932.a.e ENSGT00940000163919.a.e ENSGT00530000063370.b.d ENSGT00390000005772.l ENSGT00940000157987.k ENSGT00940000165465.d ENSGT00940000155991.z ENSGT00940000154849.b.i ENSGT00940000154191.k.a.g ENSGT00940000161716.fc.b ENSGT00940000154642.d ENSGT00950000182881.a.b.a.a.a.h ENSGT00940000165952 Oncorhynchus ANCESTRAL SPECIES ENSGT00940000160182.l ENSGT00940000163293.c.a.d ENSGT00940000155149.kc ENSGT00940000153849.a.a.a.a ENSGT00940000164825.h ENSGT01050000244898.b.a.u ENSGT00530000063869.B.l ENSGT00940000154495.b.a.a.a.a ENSGT00940000161655 ENSGT00990000210636 ENSGT00940000156855.c.a ENSGT00950000183185.c.a.a.bb.a.b.j ENSGT00390000001901.a ENSGT00390000007992.g ENSGT00940000164890.b ENSGT00950000182859.A.a.a.b.v #22 ENSGT00940000155760.t.a.e ENSGT00940000168975 ENSGT00940000159932.a.e ENSGT00940000163919.a.e ENSGT00530000063370.b.d ENSGT00390000005772.l ENSGT00940000157987.k ENSGT00940000165465.d ENSGT00940000155991.z ENSGT00940000154849.b.i ENSGT00940000154191.k.a.g ENSGT00940000161716.fc.b ENSGT00940000154642.d ENSGT00950000182881.a.b.a.a.a.h ENSGT00940000165952 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000153594.c.e.a.f ENSGT00940000160182.l ENSGT00940000163293.c.a.d ENSGT00940000155149.kc ENSGT00940000153849.a.a.a.a ENSGT00940000164825.h ENSGT01050000244898.b.a.u ENSGT00530000063869.B.l ENSGT00940000154495.b.a.a.a.a ENSGT00990000210636 ENSGT00940000156855.c.a ENSGT00950000183185.c.a.a.bb.a.b.j ENSGT00390000001901.a ENSGT00390000007992.g ENSGT00940000164890.b ENSGT00950000182859.A.a.a.b.v #22 ENSGT00940000155760.t.a.e ENSGT00940000168975 ENSGT00940000159932.a.e ENSGT00940000163919.a.e ENSGT00530000063370.b.d ENSGT00390000005772.l ENSGT00940000157987.k ENSGT00940000165465.d ENSGT00940000155991.z ENSGT00940000155755.b ENSGT00940000154191.k.a.g ENSGT00940000161716.fc.b ENSGT00940000154642.d ENSGT00950000182881.a.b.a.a.a.h ENSGT00940000165952 Coho salmon MODERN SPECIES 22 rsrc2 (ENSOKIG00005005005) ENSOKIG00005005024 hip1rb (ENSOKIG00005005300) RILPL2 (ENSOKIG00005010237) ENSOKIG00005010257 PITPNM2 (ENSOKIG00005010291) mthfd2 (ENSOKIG00005010457) mob1a (ENSOKIG00005010474) ENSOKIG00005010505 ENSOKIG00005010555 INPP5J (ENSOKIG00005010573) mat2ab (ENSOKIG00005010743) si:ch211-283h6.4 (ENSOKIG00005010769) USP39 (ENSOKIG00005010790) sftpbb (ENSOKIG00005011156) ENSOKIG00005011170 #22 ANK1 (ENSOKIG00005011563) ENSOKIG00005016637 spaw (ENSOKIG00005016644) ENSOKIG00005016674 ENSOKIG00005016716 osbp2b (ENSOKIG00005016727) rasl10a (ENSOKIG00005016785) ap1b1 (ENSOKIG00005016827) ENSOKIG00005017027 ENSOKIG00005017039 ENSOKIG00005017064 DNAH10 (ENSOKIG00005017130) ENSOKIG00005017575 ENSOKIG00005017645 ENSOKIG00005018524 Chinook salmon MODERN SPECIES 28 nkx6.3 (ENSOTSG00005016310) inpp5l (ENSOTSG00005016312) GPAT4 (ENSOTSG00005016316) POLR3D (ENSOTSG00005016526) PHYHIP (ENSOTSG00005016528) gins4 (ENSOTSG00005016529) ENSOTSG00005016530 DBNL (ENSOTSG00005016532) ube2d4 (ENSOTSG00005016539) TCF7L1 (ENSOTSG00005016546) ENSOTSG00005016843 zgc:153044 (ENSOTSG00005016845) MN1 (ENSOTSG00005016846) PITPNB (ENSOTSG00005016847) TTC28 (ENSOTSG00005016848) ebf2 (ENSOTSG00005016849) #22 ANK1 (ENSOTSG00005016869) ENSOTSG00005020307 ENSOTSG00005020308 spaw (ENSOTSG00005020309) tcn2 (ENSOTSG00005020310) ccdc117 (ENSOTSG00005020311) osbp2b (ENSOTSG00005020312) rasl10a (ENSOTSG00005020313) ap1b1 (ENSOTSG00005020318) ENSOTSG00005020446 ENSOTSG00005020451 ENSOTSG00005020454 DNAH10 (ENSOTSG00005020462) atp6v0a2b (ENSOTSG00005020507) ENSOTSG00005025535 Rainbow trout MODERN SPECIES 27 ENSOMYG00000005204 ENSOMYG00000005252 ENSOMYG00000005934 ENSOMYG00000006371 ENSOMYG00000006484 ENSOMYG00000006539 ENSOMYG00000006605 ENSOMYG00000006639 ENSOMYG00000006647 ENSOMYG00000052863 ENSOMYG00000047842 ENSOMYG00000006729 usp39 (ENSOMYG00000006991) si:ch211-283h6.4 (ENSOMYG00000007196) ENSOMYG00000061983 ENSOMYG00000007222 #22 ENSOMYG00000007762 4ebp2 (ENSOMYG00000008455) ENSOMYG00000008475 ENSOMYG00000008513 ENSOMYG00000008546 osbp2b (ENSOMYG00000008766) ENSOMYG00000062703 rasl10a (ENSOMYG00000008830) ap1b1 (ENSOMYG00000009232) ENSOMYG00000010174 ENSOMYG00000010211 ENSOMYG00000010245 ENSOMYG00000010653 ENSOMYG00000011467 ENSOMYG00000011939 Salmo ANCESTRAL SPECIES ENSGT00940000160182.l ENSGT00940000163293.c.a.d ENSGT00940000155149.kc ENSGT00940000153849.a.a.a.a ENSGT00390000009670.i ENSGT00940000164825.h ENSGT01050000244898.b.a.u ENSGT00530000063869.B.l ENSGT00940000161655 ENSGT00990000210636 ENSGT00940000156855.c.a ENSGT00950000183185.c.a.a.bb.a.b.j ENSGT00390000001901.a ENSGT00390000007992.g ENSGT00940000164890.b ENSGT00950000182859.A.a.a.b.v #22 ENSGT00940000155760.t.a.e ENSGT00940000168975 ENSGT00940000159932.a.e ENSGT00940000163919.a.e ENSGT00530000063370.b.d ENSGT00390000005772.l ENSGT00940000157987.k ENSGT00940000165465.d ENSGT00940000155991.z ENSGT00940000154849.b.i ENSGT00940000154191.k.a.g ENSGT00940000161716.fc.b ENSGT00940000154642.d ENSGT00950000182881.a.b.a.a.a.h ENSGT00940000165952 River trout MODERN SPECIES 19 hip1rb (ENSSTUG00000047044) rilpl2 (ENSSTUG00000046925) ENSSTUG00000046906 ENSSTUG00000046896 PITPNM2 (ENSSTUG00000046564) mthfd2 (ENSSTUG00000046457) mob1a (ENSSTUG00000046433) trafd1 (ENSSTUG00000046414) ENSSTUG00000046323 ENSSTUG00000046314 INPP5J (ENSSTUG00000046214) MAT2A (ENSSTUG00000046181) si:ch211-283h6.4 (ENSSTUG00000046165) usp39 (ENSSTUG00000045908) sftpbb (ENSSTUG00000045875) ebf2 (ENSSTUG00000045822) #22 ENSSTUG00000045812 ENSSTUG00000045804 ANK1 (ENSSTUG00000045262) ENSSTUG00000045230 spaw (ENSSTUG00000045213) tcn2 (ENSSTUG00000045173) ccdc117 (ENSSTUG00000045160) osbp2b (ENSSTUG00000044554) rasl10a (ENSSTUG00000044520) ap1b1 (ENSSTUG00000043694) ENSSTUG00000043641 ENSSTUG00000043624 EWSR1 (ENSSTUG00000043597) ENSSTUG00000043495 DNAH10 (ENSSTUG00000041111) Atlantic salmon MODERN SPECIES 16 ENSSSAG00000075113 ENSSSAG00000073063 ENSSSAG00000085766 ENSSSAG00000113809 arl6ip4 (ENSSSAG00000121888) mthfd2 (ENSSSAG00000072915) mob1a (ENSSSAG00000085563) ENSSSAG00000072880 ENSSSAG00000072863 ENSSSAG00000072852 ENSSSAG00000072813 si:ch211-283h6.4 (ENSSSAG00000078449) ENSSSAG00000072571 sftpbb (ENSSSAG00000072540) ENSSSAG00000112111 ENSSSAG00000072528 #22 ENSSSAG00000047949 ENSSSAG00000047398 ENSSSAG00000099535 tcn2 (ENSSSAG00000047340) ENSSSAG00000047333 osbp2b (ENSSSAG00000047180) rasl10a (ENSSSAG00000093910) ap1b1 (ENSSSAG00000043938) ENSSSAG00000114096 ENSSSAG00000043782 ENSSSAG00000043752 ENSSSAG00000042424 ENSSSAG00000086395 ENSSSAG00000009798 ENSSSAG00000086554 Northern pike MODERN SPECIES 12 CDK2AP1 (ENSELUG00000026401) lg13h12orf65 (ENSELUG00000015178) PITPNM2 (ENSELUG00000015073) arl6ip4 (ENSELUG00000014864) mthfd2 (ENSELUG00000014848) mob1a (ENSELUG00000014804) trafd1 (ENSELUG00000014733) ENSELUG00000014606 selenom (ENSELUG00000026520) INPP5J (ENSELUG00000014418) mat2ab (ENSELUG00000014295) si:ch211-283h6.4 (ENSELUG00000027450) usp39 (ENSELUG00000014265) sftpbb (ENSELUG00000014234) EPX (ENSELUG00000001173) ebf2 (ENSELUG00000014143) #22 ANK1 (ENSELUG00000001055) EIF4EBP1 (ENSELUG00000013938) spaw (ENSELUG00000013899) dguok (ENSELUG00000013881) tcn2 (ENSELUG00000013831) ccdc117 (ENSELUG00000030504) osbp2b (ENSELUG00000013786) rasl10a (ENSELUG00000024787) ap1b1 (ENSELUG00000000507) ENSELUG00000013595 ewsr1b (ENSELUG00000013575) rhbdd3 (ENSELUG00000013543) ENSELUG00000013535 atp6v0a2b (ENSELUG00000013399) ENSELUG00000013371 Acanthomorphata ANCESTRAL SPECIES 48 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.b.a ENSGT00940000161655 ENSGT00940000154284.b ENSGT00940000177369 ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000168975 ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00940000168755 ENSGT00390000013711 ENSGT00940000161542 Cod MODERN SPECIES 19 kmt5ab (ENSGMOG00000012138) mtrfr (ENSGMOG00000029974) ENSGMOG00000012144 arl6ip4 (ENSGMOG00000012151) mthfd2 (ENSGMOG00000012153) mob1a (ENSGMOG00000003937) ENSGMOG00000012156 ENSGMOG00000012158 selenom (ENSGMOG00000025188) ENSGMOG00000012173 mat2ab (ENSGMOG00000025352) si:ch211-283h6.4 (ENSGMOG00000017308) ENSGMOG00000012185 sftpbb (ENSGMOG00000012190) ENSGMOG00000012193 ENSGMOG00000012199 #22 ENSGMOG00000012205 ENSGMOG00000012219 ENSGMOG00000033364 ENSGMOG00000012228 ENSGMOG00000012233 ENSGMOG00000012237 osbp2b (ENSGMOG00000012242) rasl10a (ENSGMOG00000012248) ap1b1 (ENSGMOG00000012252) ENSGMOG00000027229 ENSGMOG00000028777 ewsr1b (ENSGMOG00000012263) ENSGMOG00000024604 ENSGMOG00000025569 ENSGMOG00000034351 Euacanthomorphacea ANCESTRAL SPECIES 14 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.b.a ENSGT00940000161655 ENSGT00940000154284.b ENSGT00940000177369 ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000168975 ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000161716 ENSGT00940000154642.d Percomorphaceae ANCESTRAL SPECIES 2 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.a.a.a ENSGT00940000161655 ENSGT00940000154284.b ENSGT00940000177369 ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000168975 ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000161716 ENSGT00940000154642.d Percomorphaceae_B ANCESTRAL SPECIES 7 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.a.a.a ENSGT00940000161655 ENSGT00940000154284.b ENSGT00940000177369 ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000168975 ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000161716 ENSGT00940000154642.d Ovalentaria ANCESTRAL SPECIES 4 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.a.a.a ENSGT00940000161655 ENSGT00940000154284.b ENSGT00940000177369 ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000168975 ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000161542 ENSGT00940000154642.d Atherinomorphae ANCESTRAL SPECIES 1 ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.a.a.a ENSGT00940000161655 ENSGT00940000154284.b ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000161716 ENSGT00940000154642.d ENSGT00950000182881.a.b.a.a.a Cyprinodontiformes ANCESTRAL SPECIES 1 ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.a.a.a ENSGT00940000161655 ENSGT00940000154284.b ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000161716 ENSGT00940000154642.d ENSGT00950000182881.a.b.a.a.a Aplocheiloidei ANCESTRAL SPECIES 24 ENSGT00940000163293.c.a ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.a.a.a ENSGT00940000154284.b ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000161716 ENSGT00940000154642.d ENSGT00950000182881.a.b.a.a.a ENSGT00570000079101.b Mangrove rivulus MODERN SPECIES 26 mtrfr (ENSKMAG00000018733) PITPNM2 (ENSKMAG00000018566) arl6ip4 (ENSKMAG00000018720) mthfd2 (ENSKMAG00000018489) mob1a (ENSKMAG00000018463) trafd1 (ENSKMAG00000018446) ENSKMAG00000018386 selenom (ENSKMAG00000018317) INPP5J (ENSKMAG00000018294) mat2ab (ENSKMAG00000018262) si:ch211-283h6.4 (ENSKMAG00000018244) usp39 (ENSKMAG00000018200) sftpbb (ENSKMAG00000018229) ENSKMAG00000018162 ENSKMAG00000018131 ebf2 (ENSKMAG00000018080) #22 ANK1 (ENSKMAG00000017962) ENSKMAG00000017930 spaw (ENSKMAG00000017922) dguok (ENSKMAG00000017906) tcn2 (ENSKMAG00000017882) osbp2b (ENSKMAG00000017751) rasl10a (ENSKMAG00000017713) ap1b1 (ENSKMAG00000017663) ENSKMAG00000017642 ewsr1b (ENSKMAG00000017617) rhbdd3 (ENSKMAG00000017579) ENSKMAG00000017541 DNAH10 (ENSKMAG00000017349) atp6v0a2b (ENSKMAG00000017289) TCTN2 (ENSKMAG00000017265) Turquoise killifish MODERN SPECIES 1627 kmt5ab (ENSNFUG00015023915) ENSNFUG00015023912 C12ORF65 (ENSNFUG00015023908) PITPNM2 (ENSNFUG00015023755) arl6ip4 (ENSNFUG00015023725) mthfd2 (ENSNFUG00015023681) OLA.12645 (ENSNFUG00015023666) trafd1 (ENSNFUG00015023653) ENSNFUG00015023645 selenom (ENSNFUG00015023644) INPP5J (ENSNFUG00015023621) mat2ab (ENSNFUG00015023611) C5H2ORF68 (ENSNFUG00015023604) usp39 (ENSNFUG00015023541) SFTPB (ENSNFUG00015023532) ebf2 (ENSNFUG00015023496) #22 ENSNFUG00015023486 ANK1 (ENSNFUG00015023113) EIF4EBP1 (ENSNFUG00015023067) spaw (ENSNFUG00015023031) dguok (ENSNFUG00015023027) TCN2L (ENSNFUG00015023018) osbp2b (ENSNFUG00015022862) rasl10a (ENSNFUG00015022841) ap1b1 (ENSNFUG00015020983) GAS2L1 (ENSNFUG00015020936) ewsr1b (ENSNFUG00015020932) rhbdd3 (ENSNFUG00015020931) ENSNFUG00015020928 ATP6V0A2B (ENSNFUG00015019388) ENSNFUG00015019355 Cyprinodontoidei ANCESTRAL SPECIES 1 ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.a.a.a ENSGT00940000161655 ENSGT00940000154284.b ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991.w.a ENSGT00940000155991.x ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000161716 ENSGT00940000154642.d Poeciliinae ANCESTRAL SPECIES 5 ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.a.a.a ENSGT00940000161655 ENSGT00940000154284.b ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991.w.a ENSGT00940000155991.w.b ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000161716 ENSGT00940000154642.d Poecilia ANCESTRAL SPECIES 3 ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.a.a.a ENSGT00940000161655 ENSGT00940000154284.b ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991.w.a ENSGT00940000155991.w.b ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000161716 ENSGT00940000154642.d NAME_6 ANCESTRAL SPECIES 190 ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.a.a.a ENSGT00940000161655 ENSGT00940000154284.b ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991.w.a Sailfin molly MODERN SPECIES 1371 ENSPLAG00000015997 ebf2 (ENSPLAG00000000828) #22 ENSPLAG00000016092 ENSPLAG00000016151 Amazon molly MODERN SPECIES 545 mtrfr (ENSPFOG00000011397) PITPNM2 (ENSPFOG00000011044) arl6ip4 (ENSPFOG00000010966) mthfd2 (ENSPFOG00000010913) mob1a (ENSPFOG00000010833) trafd1 (ENSPFOG00000010803) SMTN (ENSPFOG00000010680) selenom (ENSPFOG00000010675) INPP5J (ENSPFOG00000010595) mat2ab (ENSPFOG00000010510) mat2ab (ENSPFOG00000010440) si:ch211-283h6.4 (ENSPFOG00000010409) usp39 (ENSPFOG00000010305) sftpbb (ENSPFOG00000010256) ENSPFOG00000010065 ebf2 (ENSPFOG00000009617) #22 ank1a (ENSPFOG00000008985) ENSPFOG00000008954 spaw (ENSPFOG00000008931) dguok (ENSPFOG00000008851) tcn2 (ENSPFOG00000008793) ccdc117 (ENSPFOG00000008778) osbp2b (ENSPFOG00000008481) rasl10a (ENSPFOG00000008452) ap1b1 (ENSPFOG00000008291) Guppy MODERN SPECIES 461 kmt5ab (ENSPREG00000021252) mtrfr (ENSPREG00000021268) PITPNM2 (ENSPREG00000021286) arl6ip4 (ENSPREG00000021318) mthfd2 (ENSPREG00000021326) mob1a (ENSPREG00000021343) trafd1 (ENSPREG00000021376) ENSPREG00000021395 selenom (ENSPREG00000021417) INPP5J (ENSPREG00000021447) mat2ab (ENSPREG00000021500) si:ch211-283h6.4 (ENSPREG00000021512) usp39 (ENSPREG00000021529) sftpbb (ENSPREG00000021554) EPX (ENSPREG00000021577) ebf2 (ENSPREG00000021597) #22 ANK1 (ENSPREG00000021629) EIF4EBP1 (ENSPREG00000021678) spaw (ENSPREG00000021709) dguok (ENSPREG00000021716) tcn2 (ENSPREG00000021726) osbp2b (ENSPREG00000021738) rasl10a (ENSPREG00000021747) ap1b1 (ENSPREG00000021769) ENSPREG00000021825 ewsr1b (ENSPREG00000021835) rhbdd3 (ENSPREG00000021856) ENSPREG00000021874 ENSPREG00000021892 ENSPREG00000021918 ENSPREG00000021935 Platyfish MODERN SPECIES 3 rilpl2 (ENSXMAG00000021741) kmt5ab (ENSXMAG00000021676) PITPNM2 (ENSXMAG00000017694) arl6ip4 (ENSXMAG00000022410) mthfd2 (ENSXMAG00000017735) mob1a (ENSXMAG00000017741) trafd1 (ENSXMAG00000017752) ENSXMAG00000017754 selenom (ENSXMAG00000017770) ENSXMAG00000017772 mat2ab (ENSXMAG00000017778) si:ch211-283h6.4 (ENSXMAG00000017788) usp39 (ENSXMAG00000017793) sftpbb (ENSXMAG00000027554) ENSXMAG00000017815 ebf2 (ENSXMAG00000017859) #22 ANK1 (ENSXMAG00000017872) ENSXMAG00000017888 spaw (ENSXMAG00000017893) dguok (ENSXMAG00000017897) tcn2 (ENSXMAG00000017900) ccdc117 (ENSXMAG00000017910) osbp2b (ENSXMAG00000017911) rasl10a (ENSXMAG00000017914) ap1b1 (ENSXMAG00000017916) ENSXMAG00000021971 ewsr1b (ENSXMAG00000017933) rhbdd3 (ENSXMAG00000017943) ENSXMAG00000026943 ENSXMAG00000029686 ENSXMAG00000029259 NAME_4 ANCESTRAL SPECIES 33 ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.a.a.a ENSGT00940000161655 ENSGT00940000154284.b ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991.w.b ENSGT00940000155991.x ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000161716 ENSGT00940000154642.d Mummichog MODERN SPECIES 2204 kmt5ab (ENSFHEG00000017573) mtrfr (ENSFHEG00000017567) PITPNM2 (ENSFHEG00000017546) arl6ip4 (ENSFHEG00000017232) mthfd2 (ENSFHEG00000000827) mob1a (ENSFHEG00000017214) trafd1 (ENSFHEG00000017178) SMTN (ENSFHEG00000017167) selenom (ENSFHEG00000017133) INPP5J (ENSFHEG00000017114) mat2ab (ENSFHEG00000016806) si:ch211-283h6.4 (ENSFHEG00000016777) usp39 (ENSFHEG00000016767) sftpbb (ENSFHEG00000016751) ENSFHEG00000016739 ebf2 (ENSFHEG00000000422) #22 ANK1 (ENSFHEG00000016678) EIF4EBP1 (ENSFHEG00000016580) spaw (ENSFHEG00000016568) dguok (ENSFHEG00000016555) tcn2 (ENSFHEG00000016550) ccdc117 (ENSFHEG00000016517) osbp2b (ENSFHEG00000016509) rasl10a (ENSFHEG00000016467) ENSFHEG00000016457 ap1b1 (ENSFHEG00000016434) ENSFHEG00000016322 ENSFHEG00000016305 ewsr1b (ENSFHEG00000016297) rhbdd3 (ENSFHEG00000016271) ENSFHEG00000016233 Sheepshead minnow MODERN SPECIES 290 kmt5ab (ENSCVAG00000023010) mtrfr (ENSCVAG00000023000) PITPNM2 (ENSCVAG00000022982) arl6ip4 (ENSCVAG00000022774) mthfd2 (ENSCVAG00000022769) mob1a (ENSCVAG00000022759) trafd1 (ENSCVAG00000022736) ENSCVAG00000022717 selenom (ENSCVAG00000022673) INPP5J (ENSCVAG00000022654) mat2ab (ENSCVAG00000022635) si:ch211-283h6.4 (ENSCVAG00000022615) usp39 (ENSCVAG00000022610) sftpbb (ENSCVAG00000022600) ENSCVAG00000022596 ebf2 (ENSCVAG00000022588) #22 ANK1 (ENSCVAG00000022552) Oryzias ANCESTRAL SPECIES 7 ENSGT00940000163293.c.a ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.b.a ENSGT00940000154284.b ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000161716 ENSGT00950000182881.a.b.a.a.a ENSGT00570000079101.b Oryzias_a ANCESTRAL SPECIES 3 ENSGT00940000163293.c.a ENSGT00390000012759.e ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.b.a ENSGT00940000154284.b ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c.v ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00950000182881.a.b.a.a.a ENSGT00570000079101.b ENSGT00940000165952 Chinese medaka MODERN SPECIES 528 rilpl2 (ENSOSIG00000018632) kmt5ab (ENSOSIG00000018635) mtrfr (ENSOSIG00000018636) PITPNM2 (ENSOSIG00000018642) arl6ip4 (ENSOSIG00000018738) mthfd2 (ENSOSIG00000018742) mob1a (ENSOSIG00000018757) trafd1 (ENSOSIG00000018759) ENSOSIG00000018763 selenom (ENSOSIG00000018764) INPP5J (ENSOSIG00000018775) mat2ab (ENSOSIG00000018872) si:ch211-283h6.4 (ENSOSIG00000018873) usp39 (ENSOSIG00000018886) EPX (ENSOSIG00000018941) ebf2 (ENSOSIG00000019149) #22 ANK1 (ENSOSIG00000019576) ENSOSIG00000022966 spaw (ENSOSIG00000022970) dguok (ENSOSIG00000022980) tcn2 (ENSOSIG00000022988) ccdc117 (ENSOSIG00000022996) osbp2b (ENSOSIG00000023014) rasl10a (ENSOSIG00000023027) ap1b1 (ENSOSIG00000023171) ENSOSIG00000023535 ewsr1b (ENSOSIG00000023536) rhbdd3 (ENSOSIG00000023541) ENSOSIG00000023545 atp6v0a2b (ENSOSIG00000023595) pik3ip1 (ENSOSIG00000023657) Japanese Medaka HdrR MODERN SPECIES 23 PITPNM2 (ENSORLG00000006208) arl6ip4 (ENSORLG00000006213) mthfd2 (ENSORLG00000006229) mob1a (ENSORLG00000006246) trafd1 (ENSORLG00000006256) ENSORLG00000028982 selenom (ENSORLG00000006265) ENSORLG00000006273 mat2ab (ENSORLG00000006298) si:ch211-283h6.4 (ENSORLG00000006309) usp39 (ENSORLG00000006325) sftpbb (ENSORLG00000022185) ENSORLG00000023289 ENSORLG00000027810 ENSORLG00000029520 ebf2 (ENSORLG00000006408) #22 ANK1 (ENSORLG00000006482) ENSORLG00000006498 spaw (ENSORLG00000006553) dguok (ENSORLG00000023221) tcn2 (ENSORLG00000006588) ccdc117 (ENSORLG00000026857) osbp2b (ENSORLG00000006598) rasl10a (ENSORLG00000028722) ap1b1 (ENSORLG00000006687) ENSORLG00000023658 ewsr1b (ENSORLG00000006712) rhbdd3 (ENSORLG00000025522) ENSORLG00000006729 wscd2 (ENSORLG00000006858) cmklr1 (ENSORLG00000006867) Oryzias_b ANCESTRAL SPECIES 6 ENSGT00940000163293.c.a ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.a.a.a ENSGT00940000154284.b ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000161716 ENSGT00950000182881.a.b.a.a.a ENSGT00570000079101.b Indian medaka MODERN SPECIES 11 rilpl2 (ENSOMEG00000001656) kmt5ab (ENSOMEG00000001661) mtrfr (ENSOMEG00000001663) PITPNM2 (ENSOMEG00000001701) mthfd2 (ENSOMEG00000001732) mob1a (ENSOMEG00000001736) trafd1 (ENSOMEG00000001740) selenom (ENSOMEG00000001746) ENSOMEG00000001770 ENSOMEG00000001787 mat2ab (ENSOMEG00000001797) si:ch211-283h6.4 (ENSOMEG00000001801) usp39 (ENSOMEG00000001806) sftpbb (ENSOMEG00000001812) ENSOMEG00000000013 ebf2 (ENSOMEG00000001016) #22 ENSOMEG00000001843 ANK1 (ENSOMEG00000001854) ank1a (ENSOMEG00000001864) ENSOMEG00000001869 dguok (ENSOMEG00000000016) tcn2 (ENSOMEG00000001884) ccdc117 (ENSOMEG00000001889) osbp2b (ENSOMEG00000001904) rasl10a (ENSOMEG00000001922) ap1b1 (ENSOMEG00000001965) ENSOMEG00000001985 ewsr1b (ENSOMEG00000002003) rhbdd3 (ENSOMEG00000002011) ENSOMEG00000002047 atp6v0a2b (ENSOMEG00000002077) Javanese ricefish MODERN SPECIES 23 rilpl2 (ENSOJAG00000016181) kmt5ab (ENSOJAG00000016201) mtrfr (ENSOJAG00000016209) PITPNM2 (ENSOJAG00000016241) arl6ip4 (ENSOJAG00000016403) mthfd2 (ENSOJAG00000016415) mob1a (ENSOJAG00000016508) trafd1 (ENSOJAG00000016541) ENSOJAG00000016556 selenom (ENSOJAG00000016591) ENSOJAG00000016638 mat2ab (ENSOJAG00000017153) si:ch211-283h6.4 (ENSOJAG00000017190) usp39 (ENSOJAG00000017206) ENSOJAG00000017366 ebf2 (ENSOJAG00000017606) #22 ANK1 (ENSOJAG00000017803) ENSOJAG00000020677 spaw (ENSOJAG00000020681) dguok (ENSOJAG00000020702) ccdc117 (ENSOJAG00000020777) osbp2b (ENSOJAG00000020782) rasl10a (ENSOJAG00000020797) ap1b1 (ENSOJAG00000020810) ENSOJAG00000020826 ewsr1b (ENSOJAG00000020835) rhbdd3 (ENSOJAG00000020849) ENSOJAG00000020862 atp6v0a2b (ENSOJAG00000020903) ENSOJAG00000021182 pik3ip1 (ENSOJAG00000021208) Ovalentaria_B ANCESTRAL SPECIES 9 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.a.a.a ENSGT00940000161655 ENSGT00940000154284.b ENSGT00940000177369 ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000168975 ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000161542 ENSGT00940000154642.d Cichlidae ANCESTRAL SPECIES 6 ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.a.a.a ENSGT00940000154284.b ENSGT00940000177369 ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000168975 ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000161542 ENSGT00940000154642.d Pseudocrenilabrinae ANCESTRAL SPECIES 11 ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.a.a.a ENSGT00940000154284.b ENSGT00940000177369 ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000168975 ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000161542 ENSGT00940000154642.d Pseudocrenilabrinae_A ANCESTRAL SPECIES 8 ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.a.a.a ENSGT00940000154284.b ENSGT00940000177369 ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000168975 ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000161542 ENSGT00940000154642.d Haplochromini ANCESTRAL SPECIES 4 ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.a.a.a ENSGT00940000154284.b ENSGT00940000177369 ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000159932.a.a.b ENSGT00940000168975 ENSGT00940000159932.a.a.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987.i ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000161542 Haplochromini_A ANCESTRAL SPECIES 4 ENSGT00940000163293.c.a ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.a.a.a ENSGT00940000154284.b ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000159932.a.a.b ENSGT00940000168975 ENSGT00940000159932.a.a.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987.i ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000161542 Haplochromini_B ANCESTRAL SPECIES 2 ENSGT00940000163293.c.a ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.a.a.a ENSGT00940000154284.b ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000159932.a.a.b ENSGT00940000168975 ENSGT00940000159932.a.a.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987.i ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000161542 Zebra mbuna MODERN SPECIES 1094 kmt5ab (ENSMZEG00005000983) mtrfr (ENSMZEG00005000938) PITPNM2 (ENSMZEG00005000779) arl6ip4 (ENSMZEG00005000764) mthfd2 (ENSMZEG00005000711) mob1a (ENSMZEG00005000685) trafd1 (ENSMZEG00005000674) ENSMZEG00005000638 selenom (ENSMZEG00005000599) INPP5J (ENSMZEG00005000556) mat2ab (ENSMZEG00005000513) si:ch211-283h6.4 (ENSMZEG00005000502) usp39 (ENSMZEG00005000493) sftpbb (ENSMZEG00005000483) ENSMZEG00005000474 ebf2 (ENSMZEG00005000407) #22 ANK1 (ENSMZEG00005000212) ENSMZEG00005000185 ank1a (ENSMZEG00005000122) ENSMZEG00005017513 spaw (ENSMZEG00005017508) dguok (ENSMZEG00005017502) tcn2 (ENSMZEG00005017492) ccdc117 (ENSMZEG00005017489) osbp2b (ENSMZEG00005017484) rasl10a (ENSMZEG00005017480) ap1b1 (ENSMZEG00005017449) ENSMZEG00005017426 ewsr1b (ENSMZEG00005017417) rhbdd3 (ENSMZEG00005017411) EMID1 (ENSMZEG00005017404) Eastern happy MODERN SPECIES 3 kmt5ab (ENSACLG00000023880) mtrfr (ENSACLG00000023906) PITPNM2 (ENSACLG00000023923) arl6ip4 (ENSACLG00000024054) mthfd2 (ENSACLG00000024079) mob1a (ENSACLG00000024107) trafd1 (ENSACLG00000024115) ENSACLG00000024384 selenom (ENSACLG00000024527) INPP5J (ENSACLG00000024547) mat2ab (ENSACLG00000024577) si:ch211-283h6.4 (ENSACLG00000024610) usp39 (ENSACLG00000024626) sftpbb (ENSACLG00000024643) EPX (ENSACLG00000024666) ebf2 (ENSACLG00000024690) #22 ANK1 (ENSACLG00000024750) ENSACLG00000024871 ENSACLG00000024877 ENSACLG00000025025 spaw (ENSACLG00000025031) dguok (ENSACLG00000025037) tcn2 (ENSACLG00000025066) ccdc117 (ENSACLG00000025077) osbp2b (ENSACLG00000025120) rasl10a (ENSACLG00000025302) ap1b1 (ENSACLG00000025324) ENSACLG00000025467 ewsr1b (ENSACLG00000025479) rhbdd3 (ENSACLG00000025489) ENSACLG00000025512 P. nyererei MODERN SPECIES 301 kmt5ab (ENSPNYG00000014428) mtrfr (ENSPNYG00000014456) PITPNM2 (ENSPNYG00000014500) arl6ip4 (ENSPNYG00000014579) mthfd2 (ENSPNYG00000014596) mob1a (ENSPNYG00000014622) trafd1 (ENSPNYG00000014646) ENSPNYG00000014671 selenom (ENSPNYG00000014691) INPP5J (ENSPNYG00000014708) mat2ab (ENSPNYG00000014731) si:ch211-283h6.4 (ENSPNYG00000014754) usp39 (ENSPNYG00000014771) sftpbb (ENSPNYG00000014796) EPX (ENSPNYG00000014825) ebf2 (ENSPNYG00000014874) #22 ANK1 (ENSPNYG00000014921) ENSPNYG00000015028 ank1a (ENSPNYG00000015041) ENSPNYG00000015057 spaw (ENSPNYG00000015072) dguok (ENSPNYG00000015086) tcn2 (ENSPNYG00000015100) ccdc117 (ENSPNYG00000015132) osbp2b (ENSPNYG00000015141) rasl10a (ENSPNYG00000015164) ap1b1 (ENSPNYG00000015181) ENSPNYG00000015234 ewsr1b (ENSPNYG00000015252) rhbdd3 (ENSPNYG00000015271) DNAH10 (ENSPNYG00000015288) Burton s mouthbrooder MODERN SPECIES 283 PITPNM2 (ENSHBUG00000007246) arl6ip4 (ENSHBUG00000007166) mthfd2 (ENSHBUG00000007159) mob1a (ENSHBUG00000007149) trafd1 (ENSHBUG00000007131) ENSHBUG00000007110 selenom (ENSHBUG00000007053) ENSHBUG00000007040 ENSHBUG00000007022 mat2ab (ENSHBUG00000006986) si:ch211-283h6.4 (ENSHBUG00000006968) usp39 (ENSHBUG00000006958) sftpbb (ENSHBUG00000006951) ENSHBUG00000006940 EPX (ENSHBUG00000006922) ebf2 (ENSHBUG00000006879) #22 ANK1 (ENSHBUG00000006749) ENSHBUG00000006107 spaw (ENSHBUG00000006084) dguok (ENSHBUG00000006069) tcn2 (ENSHBUG00000006050) ccdc117 (ENSHBUG00000006040) osbp2b (ENSHBUG00000006005) rasl10a (ENSHBUG00000005695) ap1b1 (ENSHBUG00000005689) ENSHBUG00000005651 ewsr1b (ENSHBUG00000005646) rhbdd3 (ENSHBUG00000005613) ENSHBUG00000005632 DNAH10 (ENSHBUG00000005590) atp6v0a2b (ENSHBUG00000005437) Lyretail cichlid MODERN SPECIES 296 ENSNBRG00000010447 MMP19 (ENSNBRG00000010412) suox (ENSNBRG00000010397) mcrs1 (ENSNBRG00000010328) cyp27b1 (ENSNBRG00000010272) mettl1 (ENSNBRG00000010232) cdk4 (ENSNBRG00000010216) ENSNBRG00000010131 PIP4K2C (ENSNBRG00000010097) ENSNBRG00000010061 SPRYD3 (ENSNBRG00000010027) ENSNBRG00000010004 ENSNBRG00000009897 SMUG1 (ENSNBRG00000009836) EPX (ENSNBRG00000009796) ebf2 (ENSNBRG00000009759) #22 ANK1 (ENSNBRG00000009668) ENSNBRG00000009635 ank1a (ENSNBRG00000009617) ENSNBRG00000009600 dguok (ENSNBRG00000009586) tcn2 (ENSNBRG00000009574) ccdc117 (ENSNBRG00000009563) osbp2b (ENSNBRG00000009531) rasl10a (ENSNBRG00000009522) ap1b1 (ENSNBRG00000009458) ENSNBRG00000009427 ewsr1b (ENSNBRG00000009400) ENSNBRG00000009378 DNAH10 (ENSNBRG00000009180) ENSNBRG00000009117 Nile tilapia MODERN SPECIES 3 mtrfr (ENSONIG00000013298) PITPNM2 (ENSONIG00000013299) mthfd2 (ENSONIG00000013309) mob1a (ENSONIG00000013313) trafd1 (ENSONIG00000013316) ENSONIG00000039913 ENSONIG00000027517 selenom (ENSONIG00000035340) ENSONIG00000013324 mat2ab (ENSONIG00000003555) si:ch211-283h6.4 (ENSONIG00000013329) usp39 (ENSONIG00000013330) ENSONIG00000041154 ENSONIG00000034091 EPX (ENSONIG00000013339) ebf2 (ENSONIG00000013342) #22 ANK1 (ENSONIG00000013350) ENSONIG00000032534 spaw (ENSONIG00000013352) dguok (ENSONIG00000013353) tcn2 (ENSONIG00000013356) ccdc117 (ENSONIG00000030854) osbp2b (ENSONIG00000013361) rasl10a (ENSONIG00000013366) ap1b1 (ENSONIG00000013367) ENSONIG00000031046 ewsr1b (ENSONIG00000013378) ENSONIG00000038334 ENSONIG00000034830 EMID1 (ENSONIG00000013382) DNAH10 (ENSONIG00000013386) Midas cichlid MODERN SPECIES 355 ENSACIG00000010354 ENSACIG00000010366 ebf2 (ENSACIG00000010391) #22 ANK1 (ENSACIG00000010428) ENSACIG00000010539 ank1a (ENSACIG00000010550) EIF4EBP1 (ENSACIG00000010565) spaw (ENSACIG00000010618) dguok (ENSACIG00000010634) tcn2 (ENSACIG00000010678) osbp2b (ENSACIG00000010707) rasl10a (ENSACIG00000010764) ap1b1 (ENSACIG00000010776) ENSACIG00000010816 ewsr1b (ENSACIG00000010829) rhbdd3 (ENSACIG00000010864) ENSACIG00000010882 ENSACIG00000010924 Pomacentridae ANCESTRAL SPECIES ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000161655 ENSGT00940000154284.b ENSGT00940000177369 ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00730000112955 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000161716 ENSGT00940000154642.d Pomacentridae_A ANCESTRAL SPECIES 1 ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000161655 ENSGT00940000154284.b ENSGT00940000177369 ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000161716 ENSGT00940000154642.d ENSGT00950000182881.a.b.a.a.a Amphiprion ANCESTRAL SPECIES 10 ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000161655 ENSGT00940000154284.b ENSGT00940000177369 ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00940000164472.a.b.d ENSGT00390000013711 ENSGT00940000161716 ENSGT00940000154642.d Orange clownfish MODERN SPECIES 19 mtrfr (ENSAPEG00000024618) PITPNM2 (ENSAPEG00000024567) arl6ip4 (ENSAPEG00000024554) mthfd2 (ENSAPEG00000024550) mob1a (ENSAPEG00000024543) trafd1 (ENSAPEG00000024533) ENSAPEG00000024518 selenom (ENSAPEG00000024508) ENSAPEG00000024505 ENSAPEG00000024494 mat2ab (ENSAPEG00000024485) si:ch211-283h6.4 (ENSAPEG00000024480) usp39 (ENSAPEG00000024467) sftpbb (ENSAPEG00000024459) ENSAPEG00000024413 ebf2 (ENSAPEG00000024396) #22 ANK1 (ENSAPEG00000024367) ENSAPEG00000024358 spaw (ENSAPEG00000024350) dguok (ENSAPEG00000024342) tcn2 (ENSAPEG00000024337) ccdc117 (ENSAPEG00000024333) osbp2b (ENSAPEG00000024266) rasl10a (ENSAPEG00000024233) ap1b1 (ENSAPEG00000024167) ENSAPEG00000024158 ewsr1b (ENSAPEG00000024145) ENSAPEG00000024067 rhbdd3 (ENSAPEG00000024044) ENSAPEG00000024035 DNAH10 (ENSAPEG00000023968) Clown anemonefish MODERN SPECIES 319 ENSAOCG00000023451 ENSAOCG00000023483 mat2ab (ENSAOCG00000023509) si:ch211-283h6.4 (ENSAOCG00000023527) usp39 (ENSAOCG00000023553) sftpbb (ENSAOCG00000023565) ENSAOCG00000023662 ebf2 (ENSAOCG00000001716) #22 ANK1 (ENSAOCG00000023728) ENSAOCG00000023739 spaw (ENSAOCG00000023745) dguok (ENSAOCG00000023754) Spiny chromis MODERN SPECIES 1207 ebf2 (ENSAPOG00000009197) #22 ENSAPOG00000009106 ANK1 (ENSAPOG00000009002) ank1a (ENSAPOG00000008804) ENSAPOG00000008772 Bicolor damselfish MODERN SPECIES 2502 ENSSPAG00000015144 ebf2 (ENSSPAG00000015160) #22 ENSSPAG00000015249 ANK1 (ENSSPAG00000015341) ank1a (ENSSPAG00000015506) ENSSPAG00000015519 Percomorphaceae_C ANCESTRAL SPECIES 7 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.b.a ENSGT00940000161655 ENSGT00940000154284.b ENSGT00940000177369 ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000168975 ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000161716 ENSGT00940000154642.d Percomorphaceae_D ANCESTRAL SPECIES 7 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.b.a ENSGT00940000161655 ENSGT00940000154284.b ENSGT00940000177369 ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000168975 ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00940000168755 ENSGT00940000154642.d ENSGT00950000182881.a.b.a.a.a Anabantaria ANCESTRAL SPECIES 4 ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.a.a.a ENSGT00940000161655 ENSGT00940000154284.b ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000154642.d ENSGT00950000182881.a.b.a.a.a ENSGT00570000079101.b Anabantoidei ANCESTRAL SPECIES 4 ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.b.a ENSGT00940000161655 ENSGT00940000154284.b ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000154642.d ENSGT00950000182881.a.b.a.a.a ENSGT00570000079101.b Climbing perch MODERN SPECIES 22 kmt5ab (ENSATEG00000011675) mtrfr (ENSATEG00000011661) ENSATEG00000011506 arl6ip4 (ENSATEG00000027706) mthfd2 (ENSATEG00000011443) mob1a (ENSATEG00000011438) ENSATEG00000011426 SMTN (ENSATEG00000011362) selenom (ENSATEG00000011331) INPP5J (ENSATEG00000011290) mat2ab (ENSATEG00000011242) si:ch211-283h6.4 (ENSATEG00000011234) ENSATEG00000011205 sftpbb (ENSATEG00000027890) ENSATEG00000011186 ENSATEG00000011129 #22 ENSATEG00000011002 ENSATEG00000010916 ENSATEG00000010895 ENSATEG00000010885 ENSATEG00000010863 ENSATEG00000010839 osbp2b (ENSATEG00000010818) rasl10a (ENSATEG00000010796) ap1b1 (ENSATEG00000010714) ENSATEG00000010680 ewsr1b (ENSATEG00000010664) rhbdd3 (ENSATEG00000010654) ENSATEG00000026245 DNAH10 (ENSATEG00000029498) ENSATEG00000010175 Siamese fighting fish MODERN SPECIES 20 mob1a (ENSBSLG00000013917) trafd1 (ENSBSLG00000013897) ENSBSLG00000013849 selenom (ENSBSLG00000013840) INPP5J (ENSBSLG00000013669) mat2ab (ENSBSLG00000013576) si:ch211-283h6.4 (ENSBSLG00000013558) usp39 (ENSBSLG00000013016) sftpbb (ENSBSLG00000013013) ENSBSLG00000013001 ENSBSLG00000012997 ENSBSLG00000012947 ENSBSLG00000012813 ENSBSLG00000012795 ENSBSLG00000012719 ebf2 (ENSBSLG00000012704) #22 ANK1 (ENSBSLG00000008127) ENSBSLG00000007285 spaw (ENSBSLG00000007182) tcn2 (ENSBSLG00000007151) ccdc117 (ENSBSLG00000007142) osbp2b (ENSBSLG00000007051) rasl10a (ENSBSLG00000007033) ap1b1 (ENSBSLG00000006965) GAS2L1 (ENSBSLG00000006679) ewsr1b (ENSBSLG00000006515) rhbdd3 (ENSBSLG00000006469) ENSBSLG00000006369 atp6v0a2b (ENSBSLG00000004674) ENSBSLG00000004574 ENSBSLG00000004570 Zig-zag eel MODERN SPECIES 23 kmt5ab (ENSMAMG00000017368) C12orf65 (ENSMAMG00000024345) ENSMAMG00000017220 arl6ip4 (ENSMAMG00000017190) mthfd2 (ENSMAMG00000017168) mob1a (ENSMAMG00000017147) ENSMAMG00000017130 ENSMAMG00000017096 selenom (ENSMAMG00000025931) ENSMAMG00000016963 mat2ab (ENSMAMG00000016940) ENSMAMG00000016935 ENSMAMG00000027322 ENSMAMG00000024531 ENSMAMG00000016862 ENSMAMG00000016827 #22 ENSMAMG00000016735 ENSMAMG00000028711 ENSMAMG00000016707 ENSMAMG00000016698 ENSMAMG00000016694 ENSMAMG00000016676 osbp2b (ENSMAMG00000016657) ap1b1 (ENSMAMG00000016557) ENSMAMG00000016533 ewsr1b (ENSMAMG00000016510) rhbdd3 (ENSMAMG00000016504) ENSMAMG00000016493 DNAH10 (ENSMAMG00000016378) ENSMAMG00000016359 TCTN2 (ENSMAMG00000016337) Carangaria ANCESTRAL SPECIES 9 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.b.a ENSGT00940000161655 ENSGT00940000154284.b ENSGT00940000177369 ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000168975 ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00940000168755 ENSGT00950000182881.a.b.a.a.a ENSGT00570000079101.b Carangaria_A ANCESTRAL SPECIES 6 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.a.a.a ENSGT00940000161655 ENSGT00940000154284.b ENSGT00940000177369 ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000161716 ENSGT00940000154642.d ENSGT00950000182881.a.b.a.a.a Seriola ANCESTRAL SPECIES 35 ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.a.a.a ENSGT00940000154495.b.b.a ENSGT00940000154284.b ENSGT00940000177369 ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c.l ENSGT00940000156009.A.c.k ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000159932.a Yellowtail amberjack MODERN SPECIES 2853 mtrfr (ENSSLDG00000017638) PITPNM2 (ENSSLDG00000017588) arl6ip4 (ENSSLDG00000017507) mthfd2 (ENSSLDG00000017340) mob1a (ENSSLDG00000017235) trafd1 (ENSSLDG00000017208) ENSSLDG00000017156 selenom (ENSSLDG00000017101) INPP5J (ENSSLDG00000017063) mat2ab (ENSSLDG00000017044) si:ch211-283h6.4 (ENSSLDG00000017029) usp39 (ENSSLDG00000016937) ENSSLDG00000016877 ENSSLDG00000016860 EPX (ENSSLDG00000016838) ebf2 (ENSSLDG00000016812) #22 ANK1 (ENSSLDG00000016701) ENSSLDG00000016596 Greater amberjack MODERN SPECIES 98 mthfd2 (ENSSDUG00000020221) mob1a (ENSSDUG00000020206) trafd1 (ENSSDUG00000020193) ENSSDUG00000020068 selenom (ENSSDUG00000020048) ENSSDUG00000020041 ENSSDUG00000020027 mat2ab (ENSSDUG00000020008) si:ch211-283h6.4 (ENSSDUG00000019998) usp39 (ENSSDUG00000019931) sftpbb (ENSSDUG00000019891) ENSSDUG00000019856 ENSSDUG00000019782 ENSSDUG00000019767 EPX (ENSSDUG00000017578) ebf2 (ENSSDUG00000017394) #22 ANK1 (ENSSDUG00000017309) ENSSDUG00000017281 Barramundi perch MODERN SPECIES 95 kmt5ab (ENSLCAG00010028279) mtrfr (ENSLCAG00010028278) PITPNM2 (ENSLCAG00010028277) arl6ip4 (ENSLCAG00010028276) mthfd2 (ENSLCAG00010028275) mob1a (ENSLCAG00010028274) trafd1 (ENSLCAG00010028273) SMTN (ENSLCAG00010028272) selenom (ENSLCAG00010028271) INPP5J (ENSLCAG00010028270) mat2ab (ENSLCAG00010028269) si:ch211-283h6.4 (ENSLCAG00010028268) usp39 (ENSLCAG00010028267) sftpbb (ENSLCAG00010028266) ENSLCAG00010028265 ebf2 (ENSLCAG00010028264) #22 ANK1 (ENSLCAG00010028262) EIF4EBP1 (ENSLCAG00010028261) spaw (ENSLCAG00010028260) ENSLCAG00010028259 tcn2 (ENSLCAG00010028258) ccdc117 (ENSLCAG00010028257) osbp2b (ENSLCAG00010028256) ap1b1 (ENSLCAG00010028255) ENSLCAG00010028254 ewsr1b (ENSLCAG00010028253) rhbdd3 (ENSLCAG00010028252) ENSLCAG00010028251 DNAH10 (ENSLCAG00010028250) atp6v0a2b (ENSLCAG00010028249) TCTN2 (ENSLCAG00010028248) Pleuronectoidei ANCESTRAL SPECIES 8 ENSGT00940000160182 ENSGT00940000163293.c.a ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.b.a ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000168975 ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00940000168755 ENSGT00940000154642.d ENSGT00950000182881.a.b.a.a.a Tongue sole DUPLICATION Tongue sole MODERN SPECIES 31 ENSCSEG00000012719 ebf2 (ENSCSEG00000013272) #22 ANK1 (ENSCSEG00000013307) ENSCSEG00000013357 ENSCSEG00000013360 dguok (ENSCSEG00000013362) ENSCSEG00000013374 ENSCSEG00000013382 tcn2 (ENSCSEG00000013399) osbp2b (ENSCSEG00000013407) ENSCSEG00000013436 rasl10a (ENSCSEG00000013444) ap1b1 (ENSCSEG00000013466) ENSCSEG00000013603 Tongue sole MODERN SPECIES 397 ERLIN2 (ENSCSEG00000014144) znf703 (ENSCSEG00000014156) ENSCSEG00000014161 ENSCSEG00000014166 ENSCSEG00000014190 smad2 (ENSCSEG00000014228) ENSCSEG00000014409 ENSCSEG00000014410 smarcad1a (ENSCSEG00000014419) ENSCSEG00000014459 grid2 (ENSCSEG00000014466) ENSCSEG00000014483 ENSCSEG00000014489 ENSCSEG00000014501 ENSCSEG00000014508 ebf2 (ENSCSEG00000014512) #22 ANK1 (ENSCSEG00000014527) ENSCSEG00000014589 ENSCSEG00000014602 spaw (ENSCSEG00000014635) ENSCSEG00000014643 ENSCSEG00000014652 ENSCSEG00000014659 rasl10a (ENSCSEG00000015572) ap1b1 (ENSCSEG00000015590) ENSCSEG00000015966 ENSCSEG00000015972 atp6v0a2b (ENSCSEG00000015984) ENSCSEG00000016016 ENSCSEG00000016020 ENSCSEG00000016024 Turbot MODERN SPECIES 21 kmt5ab (ENSSMAG00000016787) mtrfr (ENSSMAG00000033634) ENSSMAG00000016662 arl6ip4 (ENSSMAG00000016606) mthfd2 (ENSSMAG00000016570) mob1a (ENSSMAG00000016560) ENSSMAG00000016533 ENSSMAG00000016422 ENSSMAG00000016360 ENSSMAG00000016324 si:ch211-283h6.4 (ENSSMAG00000022989) ENSSMAG00000016281 sftpbb (ENSSMAG00000016234) ENSSMAG00000016145 ENSSMAG00000016108 ENSSMAG00000016051 #22 ENSSMAG00000015797 ENSSMAG00000015759 ENSSMAG00000015754 ENSSMAG00000015729 ENSSMAG00000015710 osbp2b (ENSSMAG00000015603) rasl10a (ENSSMAG00000036011) ap1b1 (ENSSMAG00000015486) ENSSMAG00000015463 ewsr1b (ENSSMAG00000015449) ENSSMAG00000015440 ENSSMAG00000015394 ENSSMAG00000015195 ENSSMAG00000015116 ENSSMAG00000026057 Eupercaria ANCESTRAL SPECIES 5 ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.b.a ENSGT00940000161655 ENSGT00940000154284.b ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000161716 ENSGT00940000154642.d ENSGT00950000182881.a.b.a.a.a Tetraodontidae ANCESTRAL SPECIES 12 ENSGT00940000163293.c.a ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.b.a ENSGT00940000154284.b ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000161716 ENSGT00940000154642.d ENSGT00950000182881.a.b.a.a.a Fugu MODERN SPECIES 13 kmt5ab (ENSTRUG00000029390) mtrfr (ENSTRUG00000027946) PITPNM2 (ENSTRUG00000009641) arl6ip4 (ENSTRUG00000010106) mthfd2 (ENSTRUG00000010166) mob1a (ENSTRUG00000010297) trafd1 (ENSTRUG00000021902) ENSTRUG00000010473 selenom (ENSTRUG00000011053) INPP5J (ENSTRUG00000011059) mat2ab (ENSTRUG00000021803) si:ch211-283h6.4 (ENSTRUG00000011291) usp39 (ENSTRUG00000011317) sftpbb (ENSTRUG00000023363) ENSTRUG00000011376 ebf2 (ENSTRUG00000011528) #22 ANK1 (ENSTRUG00000011938) ENSTRUG00000024442 spaw (ENSTRUG00000012437) dguok (ENSTRUG00000012499) tcn2 (ENSTRUG00000012642) ccdc117 (ENSTRUG00000019657) osbp2b (ENSTRUG00000012868) rasl10a (ENSTRUG00000029269) ENSTRUG00000024711 ap1b1 (ENSTRUG00000013017) ENSTRUG00000013171 ewsr1b (ENSTRUG00000021926) rhbdd3 (ENSTRUG00000020217) ENSTRUG00000032865 atp6v0a2b (ENSTRUG00000013490) Tetraodon MODERN SPECIES 3 rilpl2 (ENSTNIG00000015830) kmt5ab (ENSTNIG00000015831) mtrfr (ENSTNIG00000015832) PITPNM2 (ENSTNIG00000015833) arl6ip4 (ENSTNIG00000015834) mthfd2 (ENSTNIG00000015835) mob1a (ENSTNIG00000015836) ENSTNIG00000015837 selenom (ENSTNIG00000015838) INPP5J (ENSTNIG00000015839) mat2ab (ENSTNIG00000015840) si:ch211-283h6.4 (ENSTNIG00000015841) usp39 (ENSTNIG00000015842) ENSTNIG00000015843 ENSTNIG00000015844 ebf2 (ENSTNIG00000015845) #22 ANK1 (ENSTNIG00000015846) spaw (ENSTNIG00000015847) dguok (ENSTNIG00000015848) tcn2 (ENSTNIG00000015849) osbp2b (ENSTNIG00000015850) rasl10a (ENSTNIG00000015851) ap1b1 (ENSTNIG00000015852) GAS2L1 (ENSTNIG00000015853) ewsr1b (ENSTNIG00000015854) ENSTNIG00000015855 ENSTNIG00000015856 DNAH10 (ENSTNIG00000015857) atp6v0a2b (ENSTNIG00000015858) TCTN2 (ENSTNIG00000015859) ENSTNIG00000015860 Eupecaria_A ANCESTRAL SPECIES 6 ENSGT00940000163293.c.a ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000161655 ENSGT00940000154284.b ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000161716 ENSGT00940000154642.d ENSGT00950000182881.a.b.a.a.a Ballan wrasse MODERN SPECIES 370 kmt5ab (ENSLBEG00000014052) ENSLBEG00000014033 PITPNM2 (ENSLBEG00000013976) mthfd2 (ENSLBEG00000013927) mob1a (ENSLBEG00000013834) ENSLBEG00000013786 ENSLBEG00000013750 selenom (ENSLBEG00000013729) INPP5J (ENSLBEG00000013694) mat2ab (ENSLBEG00000013663) si:ch211-283h6.4 (ENSLBEG00000013646) usp39 (ENSLBEG00000013591) sftpbb (ENSLBEG00000013559) ENSLBEG00000013385 EPX (ENSLBEG00000013277) ebf2 (ENSLBEG00000013215) #22 Eupecaria_B ANCESTRAL SPECIES 6 ENSGT00940000163293.c.a ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000161655 ENSGT00940000154284.b ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000161716 ENSGT00940000154642.d ENSGT00950000182881.a.b.a.a.a Perciformes ANCESTRAL SPECIES 6 ENSGT00940000163293.c.a ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000161655 ENSGT00940000154284.b ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000161716 ENSGT00940000154642.d ENSGT00950000182881.a.b.a.a.a Perciformes_a ANCESTRAL SPECIES 4 ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.a.a.a ENSGT00940000161655 ENSGT00940000154284.b ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000161716 ENSGT00940000154642.d ENSGT00950000182881.a.b.a.a.a Pike perch MODERN SPECIES 23 PITPNM2 (ENSSLUG00000008829) arl6ip4 (ENSSLUG00000008792) mthfd2 (ENSSLUG00000008763) mob1a (ENSSLUG00000008719) trafd1 (ENSSLUG00000008709) ENSSLUG00000008686 selenom (ENSSLUG00000008673) INPP5J (ENSSLUG00000008211) mat2ab (ENSSLUG00000008142) si:ch211-283h6.4 (ENSSLUG00000008133) usp39 (ENSSLUG00000008012) ENSSLUG00000007991 ENSSLUG00000007985 EPX (ENSSLUG00000007929) ENSSLUG00000007778 ebf2 (ENSSLUG00000007728) #22 ANK1 (ENSSLUG00000007180) ENSSLUG00000007082 spaw (ENSSLUG00000007069) dguok (ENSSLUG00000007057) tcn2 (ENSSLUG00000007022) ccdc117 (ENSSLUG00000007005) osbp2b (ENSSLUG00000006855) rasl10a (ENSSLUG00000006831) ap1b1 (ENSSLUG00000001883) ENSSLUG00000001336 ewsr1b (ENSSLUG00000001330) ENSSLUG00000001328 ENSSLUG00000001320 DNAH10 (ENSSLUG00000001270) atp6v0a2b (ENSSLUG00000001202) Channel bull blenny MODERN SPECIES 23 kmt5ab (ENSCGOG00000017747) mtrfr (ENSCGOG00000017744) PITPNM2 (ENSCGOG00000017006) arl6ip4 (ENSCGOG00000016967) mthfd2 (ENSCGOG00000016920) mob1a (ENSCGOG00000016865) trafd1 (ENSCGOG00000016854) SMTN (ENSCGOG00000016833) selenom (ENSCGOG00000016832) INPP5J (ENSCGOG00000016704) mat2ab (ENSCGOG00000016307) si:ch211-283h6.4 (ENSCGOG00000016295) usp39 (ENSCGOG00000016003) sftpbb (ENSCGOG00000015999) ENSCGOG00000015995 ebf2 (ENSCGOG00000015989) #22 ANK1 (ENSCGOG00000009984) ENSCGOG00000009821 spaw (ENSCGOG00000009777) dguok (ENSCGOG00000009766) tcn2 (ENSCGOG00000009755) ccdc117 (ENSCGOG00000009751) osbp2b (ENSCGOG00000009686) rasl10a (ENSCGOG00000009683) ap1b1 (ENSCGOG00000008937) ENSCGOG00000008892 ENSCGOG00000008885 ewsr1b (ENSCGOG00000008862) rhbdd3 (ENSCGOG00000008856) ENSCGOG00000008843 ENSCGOG00000008833 Cottioidei ANCESTRAL SPECIES 11 ENSGT00940000163293.c.a ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000161655 ENSGT00940000154284.b ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00940000168755 ENSGT00940000154642.d ENSGT00950000182881.a.b.a.a.a ENSGT00570000079101.b Lumpfish MODERN SPECIES 24 trafd1 (ENSCLMG00005009672) SMTN (ENSCLMG00005009674) selenom (ENSCLMG00005009680) ENSCLMG00005009681 INPP5J (ENSCLMG00005009682) mat2ab (ENSCLMG00005009683) si:ch211-283h6.4 (ENSCLMG00005009690) usp39 (ENSCLMG00005009698) sftpbb (ENSCLMG00005009739) ENSCLMG00005009741 ENSCLMG00005009742 EPX (ENSCLMG00005009771) ENSCLMG00005009785 ENSCLMG00005009807 EPX (ENSCLMG00005009914) ebf2 (ENSCLMG00005009920) #22 ANK1 (ENSCLMG00005009962) ENSCLMG00005016789 spaw (ENSCLMG00005016791) ENSCLMG00005016792 tcn2 (ENSCLMG00005016793) ccdc117 (ENSCLMG00005016796) osbp2b (ENSCLMG00005016803) rasl10a (ENSCLMG00005016836) ap1b1 (ENSCLMG00005016862) ENSCLMG00005019738 ewsr1b (ENSCLMG00005019739) rhbdd3 (ENSCLMG00005019740) ENSCLMG00005019741 ENSCLMG00005019743 ENSCLMG00005019744 Stickleback MODERN SPECIES 12 kmt5ab (ENSGACG00000008249) mtrfr (ENSGACG00000008255) PITPNM2 (ENSGACG00000008257) arl6ip4 (ENSGACG00000008271) mthfd2 (ENSGACG00000008274) mob1a (ENSGACG00000008308) ENSGACG00000008336 ENSGACG00000008350 selenom (ENSGACG00000008365) INPP5J (ENSGACG00000008367) mat2ab (ENSGACG00000008374) si:ch211-283h6.4 (ENSGACG00000008412) usp39 (ENSGACG00000008416) sftpbb (ENSGACG00000008426) EPX (ENSGACG00000008429) ebf2 (ENSGACG00000008451) #22 ANK1 (ENSGACG00000008464) spaw (ENSGACG00000008499) dguok (ENSGACG00000008502) tcn2 (ENSGACG00000008530) ccdc117 (ENSGACG00000008555) osbp2b (ENSGACG00000008560) rasl10a (ENSGACG00000008570) ap1b1 (ENSGACG00000008581) GAS2L1 (ENSGACG00000008598) ewsr1b (ENSGACG00000008603) ENSGACG00000008626 ENSGACG00000008631 DNAH10 (ENSGACG00000008633) atp6v0a2b (ENSGACG00000008660) ENSGACG00000008693 Eupecaria_C ANCESTRAL SPECIES 3 ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.a.a.a ENSGT00940000161655 ENSGT00940000154284.b ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000161716 ENSGT00940000154642.d ENSGT00950000182881.a.b.a.a.a Gilthead seabream MODERN SPECIES 19 kmt5ab (ENSSAUG00010008196) mtrfr (ENSSAUG00010008197) PITPNM2 (ENSSAUG00010008205) arl6ip4 (ENSSAUG00010008232) mthfd2 (ENSSAUG00010008234) mob1a (ENSSAUG00010008237) trafd1 (ENSSAUG00010008244) ENSSAUG00010008250 selenom (ENSSAUG00010008256) INPP5J (ENSSAUG00010008260) mat2ab (ENSSAUG00010008281) si:ch211-283h6.4 (ENSSAUG00010008346) usp39 (ENSSAUG00010008348) ENSSAUG00010008358 ENSSAUG00010008365 ebf2 (ENSSAUG00010009055) #22 ANK1 (ENSSAUG00010009127) ENSSAUG00010009205 spaw (ENSSAUG00010009208) dguok (ENSSAUG00010009210) tcn2 (ENSSAUG00010009213) ccdc117 (ENSSAUG00010009216) osbp2b (ENSSAUG00010009219) rasl10a (ENSSAUG00010009234) ap1b1 (ENSSAUG00010009237) ENSSAUG00010009244 ewsr1b (ENSSAUG00010009245) rhbdd3 (ENSSAUG00010009247) ENSSAUG00010009249 atp6v0a2b (ENSSAUG00010009329) ENSSAUG00010015357 Eupercaria_incertae_sedis ANCESTRAL SPECIES 9 ENSGT00390000012759 ENSGT00940000153849.a.a.a ENSGT00390000009670 ENSGT00940000164825 ENSGT01050000244898.b.a ENSGT00530000063869.B ENSGT00940000154495.b.a.a.a ENSGT00940000161655 ENSGT00940000154284.b ENSGT00940000156855.c ENSGT00950000183185.c.a.a.bb.a.b ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 ENSGT00940000155760.t.a ENSGT00940000159932.a ENSGT00940000163919.a ENSGT00940000159627 ENSGT00530000063370.b ENSGT00390000005772 ENSGT00940000157987 ENSGT00940000165465 ENSGT00940000155991 ENSGT00940000154849.b ENSGT00940000154191.k.a ENSGT00390000013711 ENSGT00940000161716 ENSGT00940000154642.d ENSGT00950000182881.a.b.a.a.a European seabass MODERN SPECIES 13 rilpl2 (ENSDLAG00005026936) kmt5ab (ENSDLAG00005027975) ENSDLAG00005001515 arl6ip4 (ENSDLAG00005027500) mthfd2 (ENSDLAG00005001301) mob1a (ENSDLAG00005033706) ENSDLAG00005001224 SMTN (ENSDLAG00005028720) selenom (ENSDLAG00005025123) INPP5J (ENSDLAG00005025038) mat2ab (ENSDLAG00005025002) si:ch211-283h6.4 (ENSDLAG00005024997) ENSDLAG00005024953 sftpbb (ENSDLAG00005024943) ENSDLAG00005024839 ENSDLAG00005024785 #22 ENSDLAG00005024539 ENSDLAG00005028009 ENSDLAG00005024507 ENSDLAG00005024487 ENSDLAG00005024480 ENSDLAG00005031037 osbp2b (ENSDLAG00005024477) rasl10a (ENSDLAG00005024476) ap1b1 (ENSDLAG00005023469) ENSDLAG00005029080 ewsr1b (ENSDLAG00005023400) rhbdd3 (ENSDLAG00005023399) ENSDLAG00005023395 DNAH10 (ENSDLAG00005023275) ENSDLAG00005022874 Large yellow croaker MODERN SPECIES 2 rilpl2 (ENSLCRG00005001304) kmt5ab (ENSLCRG00005001301) mtrfr (ENSLCRG00005001300) PITPNM2 (ENSLCRG00005000718) arl6ip4 (ENSLCRG00005000633) mthfd2 (ENSLCRG00005000624) mob1a (ENSLCRG00005000611) trafd1 (ENSLCRG00005000605) ENSLCRG00005000584 ENSLCRG00005000581 mat2ab (ENSLCRG00005000579) si:ch211-283h6.4 (ENSLCRG00005000578) usp39 (ENSLCRG00005000540) sftpbb (ENSLCRG00005000537) ENSLCRG00005000248 ebf2 (ENSLCRG00005000105) #22 ANK1 (ENSLCRG00005019273) ENSLCRG00005019268 spaw (ENSLCRG00005019267) dguok (ENSLCRG00005019266) tcn2 (ENSLCRG00005019265) ccdc117 (ENSLCRG00005019264) osbp2b (ENSLCRG00005019263) rasl10a (ENSLCRG00005019262) ap1b1 (ENSLCRG00005019099) ENSLCRG00005019095 ewsr1b (ENSLCRG00005019092) ENSLCRG00005019089 rhbdd3 (ENSLCRG00005019087) ENSLCRG00005019086 atp6v0a2b (ENSLCRG00005017450) Tiger tail seahorse MODERN SPECIES 89 med22 (ENSHCOG00000011324) zgc:103692 (ENSHCOG00000011312) nfu1 (ENSHCOG00000011290) gfpt1 (ENSHCOG00000011267) ANTXR1 (ENSHCOG00000011213) mob1a (ENSHCOG00000011169) trafd1 (ENSHCOG00000011162) ENSHCOG00000011145 selenom (ENSHCOG00000011125) INPP5J (ENSHCOG00000000342) mat2ab (ENSHCOG00000011076) si:ch211-283h6.4 (ENSHCOG00000011042) usp39 (ENSHCOG00000011034) sftpbb (ENSHCOG00000011021) ENSHCOG00000011008 ebf2 (ENSHCOG00000011002) #22 ANK1 (ENSHCOG00000010970) ENSHCOG00000010936 ank1a (ENSHCOG00000010924) ENSHCOG00000010913 spaw (ENSHCOG00000010909) dguok (ENSHCOG00000010891) tcn2 (ENSHCOG00000010885) ccdc117 (ENSHCOG00000010870) osbp2b (ENSHCOG00000010856) rasl10a (ENSHCOG00000010738) ap1b1 (ENSHCOG00000000717) GAS2L1 (ENSHCOG00000010610) ewsr1b (ENSHCOG00000010568) rhbdd3 (ENSHCOG00000010554) ENSHCOG00000010538 Pinecone sodierfish MODERN SPECIES 23 kmt5ab (ENSMMDG00005018431) mtrfr (ENSMMDG00005018425) PITPNM2 (ENSMMDG00005017796) arl6ip4 (ENSMMDG00005017666) mthfd2 (ENSMMDG00005017633) mob1a (ENSMMDG00005017567) trafd1 (ENSMMDG00005017508) ENSMMDG00005017475 selenom (ENSMMDG00005017463) ENSMMDG00005017446 mat2ab (ENSMMDG00005017383) si:ch211-283h6.4 (ENSMMDG00005017361) usp39 (ENSMMDG00005017241) sftpbb (ENSMMDG00005017119) ENSMMDG00005016571 ebf2 (ENSMMDG00005016341) #22 ANK1 (ENSMMDG00005014687) ank1a (ENSMMDG00005014268) ENSMMDG00005014235 spaw (ENSMMDG00005014169) dguok (ENSMMDG00005014110) tcn2 (ENSMMDG00005014074) ccdc117 (ENSMMDG00005014065) osbp2b (ENSMMDG00005013520) rasl10a (ENSMMDG00005013324) ap1b1 (ENSMMDG00005004197) GAS2L1 (ENSMMDG00005001149) ewsr1b (ENSMMDG00005001067) rhbdd3 (ENSMMDG00005001008) ENSMMDG00005021470 ENSMMDG00005021468 Osteoglossiformes ANCESTRAL SPECIES 47 ENSGT00940000155991 ENSGT00940000165465 ENSGT00940000157987 ENSGT00390000005772 ENSGT00530000063370.b ENSGT00530000063869.B ENSGT00940000154495.b.b.a ENSGT00940000161655 ENSGT00940000154284.b ENSGT00940000156855.c ENSGT00950000183185.c.a.a ENSGT00390000001901 ENSGT00390000007992 ENSGT00940000164890.b ENSGT00940000156009.A.c ENSGT00950000182859.A.a.a.b #22 Asian bonytongue MODERN SPECIES 10 GAS2L1 (ENSSFOG00015027655) ap1b1 (ENSSFOG00015001894) rasl10a (ENSSFOG00015001821) osbp2b (ENSSFOG00015025852) ccdc117 (ENSSFOG00015027233) tcn2 (ENSSFOG00015001813) trafd1 (ENSSFOG00015001804) SMTN (ENSSFOG00015001788) selenom (ENSSFOG00015028744) INPP5J (ENSSFOG00015001597) mat2ab (ENSSFOG00015027261) si:ch211-283h6.4 (ENSSFOG00015001551) usp39 (ENSSFOG00015001542) ENSSFOG00015032713 ENSSFOG00015001529 ebf2 (ENSSFOG00015001451) #22 zgc:162200 (ENSSFOG00015001424) nt5dc2 (ENSSFOG00015001364) ENSSFOG00015001344 tbc1d25 (ENSSFOG00015028889) ENSSFOG00015001226 tox2 (ENSSFOG00015001168) ENSSFOG00015001026 PREX1 (ENSSFOG00015000864) kcnq2a (ENSSFOG00015028801) CHRNA4 (ENSSFOG00015000746) zgpat (ENSSFOG00015000739) ENSSFOG00015000734 rtel1 (ENSSFOG00015000577) STMN3 (ENSSFOG00015000551) ##14 pdyn (ENSSFOG00015031763) P. kingsleyae MODERN SPECIES 523 ENSPKIG00000017315 trafd1 (ENSPKIG00000017365) ENSPKIG00000017489 selenom (ENSPKIG00000017624) INPP5J (ENSPKIG00000017651) mat2ab (ENSPKIG00000017674) si:ch211-283h6.4 (ENSPKIG00000017698) usp39 (ENSPKIG00000017728) sftpbb (ENSPKIG00000017785) ENSPKIG00000017822 ebf2 (ENSPKIG00000017875) #22 Spotted gar MODERN SPECIES 647 ykt6 (ENSLOCG00000015179) NPC1L1 (ENSLOCG00000015181) ddx56 (ENSLOCG00000015185) tmed4 (ENSLOCG00000015187) nt5c2l1 (ENSLOCG00000015189) slc20a1b (ENSLOCG00000015194) snrnp200 (ENSLOCG00000015198) ciao1 (ENSLOCG00000015205) tmem127 (ENSLOCG00000015207) STARD7 (ENSLOCG00000015208) GGCX (ENSLOCG00000015209) mat2ab (ENSLOCG00000015213) usp39 (ENSLOCG00000015215) ENSLOCG00000015217 mpx (ENSLOCG00000015220) ebf2 (ENSLOCG00000015225) #22 ank1a (ENSLOCG00000015227) CNNM3 (ENSLOCG00000015245) CNNM4 (ENSLOCG00000015250) lman2la (ENSLOCG00000015252) wbp1 (ENSLOCG00000015254) arl3b (ENSLOCG00000015256) PAX8 (ENSLOCG00000015261) ENSLOCG00000015264 ENSLOCG00000015267 ENSLOCG00000015271 purbb (ENSLOCG00000015273) h2az2b (ENSLOCG00000015274) polm (ENSLOCG00000015276) gnsb (ENSLOCG00000015279) ZMIZ2 (ENSLOCG00000015282) Reedfish MODERN SPECIES ash2l (ENSECRG00000000323) star (ENSECRG00000000322) ENSECRG00000000321 lsm1 (ENSECRG00000000320) bag4 (ENSECRG00000000319) DUSP26 (ENSECRG00000000318) ENSECRG00000000317 RNF122 (ENSECRG00000000316) ENSECRG00000000314 mat2ab (ENSECRG00000000313) si:ch211-283h6.4 (ENSECRG00000000312) usp39 (ENSECRG00000000311) ENSECRG00000000310 mpx (ENSECRG00000000309) mpx (ENSECRG00000000308) ebf2 (ENSECRG00000000307) #22 ank1a (ENSECRG00000000306) POLR3D (ENSECRG00000000305) ENSECRG00000000304 ppp1r3c2b (ENSECRG00000000303) gins4 (ENSECRG00000000302) gatd3l (ENSECRG00000000301) ENSECRG00000000300 chmp7 (ENSECRG00000000299) lgi3 (ENSECRG00000000298) fgfr1b (ENSECRG00000000297) ankrd39 (ENSECRG00000000296) ENSECRG00000000295 kctd9b (ENSECRG00000000294) #24 actr1b (ENSECRG00000000293) marchf5l (ENSECRG00000000292) Euteleostomi ANCESTRAL SPECIES 247 ENSGT00390000012630.A ENSGT00940000159140.c.b ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b ##22 ENSGT01030000234518.A.a.a ENSGT00940000165044 ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00950000182932.A.b.a.a.a ENSGT00950000182859.A.a.b.a.b ##22 ENSGT00940000155650 ENSGT00390000012944 ENSGT00390000011705 ENSGT00940000161042 ENSGT00940000159624 Actinopterygii ANCESTRAL SPECIES 103 ENSGT00940000156866 ENSGT00390000014165 ENSGT00940000160854 ENSGT00390000011206.b ENSGT00390000005589.a.b ENSGT00950000183067.a.b.a ENSGT00950000182850.a.b.a.b.b ENSGT00530000063812.B ENSGT00940000159538 ENSGT00940000156641 ENSGT00390000007501 ENSGT00390000012630.A ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b ##22 ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00950000182932.A.b.a.a.a ENSGT00950000182859.A.a.b.a.b ##22 ENSGT00940000155650 ENSGT00390000012944 ENSGT00390000011705 ENSGT00940000159624 Reedfish MODERN SPECIES 13 sfxn5b (ENSECRG00000004187) ENSECRG00000004223 cct7 (ENSECRG00000004242) ENSECRG00000004260 ENSECRG00000004271 ENSECRG00000004299 ENSECRG00000004322 ENSECRG00000004346 ENSECRG00000004356 dok1b (ENSECRG00000004363) ENSECRG00000004376 ENSECRG00000004385 ENSECRG00000004394 ENSECRG00000004397 ENSECRG00000004403 ENSECRG00000004457 ##22 ENSECRG00000004794 ENSECRG00000006073 ENSECRG00000006081 ENSECRG00000006089 ENSECRG00000006094 ENSECRG00000006102 ENSECRG00000006126 ENSECRG00000006138 ENSECRG00000006146 dctn1a (ENSECRG00000006170) PCED1A (ENSECRG00000006240) ENSECRG00000006421 ENSECRG00000007706 ENSECRG00000007725 ENSECRG00000007741 Neopterygii ANCESTRAL SPECIES 24 ENSGT00390000005589.a.b ENSGT00950000183067.a.b.a ENSGT00950000182850.a.b.a.b.b ENSGT00530000063812.B ENSGT00940000159538.g ENSGT00940000156641 ENSGT00390000007501 ENSGT00390000012630.A ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b ##22 ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00950000182932.A.b.a.b ENSGT00950000182859.A.a.b.a.b ##22 ENSGT00940000155650 ENSGT00390000012944 ENSGT00390000011705 ENSGT00940000159624 ENSGT00940000157770 ENSGT01030000234518.A.a.b ENSGT00950000182864.a.b.b.a.b.a.b ##21 ENSGT00390000011206.b ENSGT00940000160854 ENSGT00390000014165 ENSGT00940000156866 ENSGT00390000007125.b Spotted gar MODERN SPECIES 670 ENSLOCG00000001380 dok1b (ENSLOCG00000001428) m1ap (ENSLOCG00000001444) SEMA4F (ENSLOCG00000001476) ENSLOCG00000001508 ENSLOCG00000001521 ENSLOCG00000001537 SPEF1 (ENSLOCG00000001547) ENSLOCG00000001581 ADISSP (ENSLOCG00000001593) vax2 (ENSLOCG00000001602) ENSLOCG00000001621 tex261 (ENSLOCG00000001643) ENSLOCG00000001657 ENSLOCG00000001669 ENSLOCG00000001693 ##22 CPXM1 (ENSLOCG00000001718) ENSLOCG00000017470 dctn1a (ENSLOCG00000001745) fam113 (ENSLOCG00000001799) ADAM33 (ENSLOCG00000001814) ENSLOCG00000001832 ENSLOCG00000001848 ENSLOCG00000001861 nanos1 (ENSLOCG00000018172) lbx2 (ENSLOCG00000001890) pcgf1 (ENSLOCG00000001907) fgf24 (ENSLOCG00000001921) npm1b (ENSLOCG00000001942) tlx2 (ENSLOCG00000001968) kazald2 (ENSLOCG00000001985) Osteoglossocephalai ANCESTRAL SPECIES 681 ENSGT00940000153169.A.b.b.e.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.B Clupeocephala ANCESTRAL SPECIES 163 ENSGT00940000158625 ENSGT00940000153169.A.b.b.e.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.B ENSGT00530000063506.A ENSGT00530000063555.A.a.a ENSGT00950000183132.C ENSGT00390000001695 ENSGT00940000155341 ENSGT00940000155244.d ENSGT00940000153596.A ENSGT01030000234799 ENSGT00950000183018.b ENSGT00940000154658.b.i.a ENSGT00940000157174.d ENSGT00940000177365 ENSGT00940000159937 ENSGT00390000013344 Euteleosteomorpha ANCESTRAL SPECIES 125 ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000153169.A.b.b.e.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.B ENSGT00530000063506.A ENSGT00530000063555.A.a.a ENSGT00950000183132.C ENSGT00390000001695 ENSGT00940000155341 ENSGT00940000155244.d ENSGT00940000153596.A ENSGT01030000234799 ENSGT00950000183018.b ENSGT00940000154658.b.i.a ENSGT00940000157174.d ENSGT00940000177365 ENSGT00940000159937 ENSGT00390000013344 Acanthomorphata ANCESTRAL SPECIES 568 ENSGT00940000153169.A.b.b.e.b ENSGT00950000182859.A.a.a.a ##22 Euacanthomorphacea ANCESTRAL SPECIES 325 ENSGT00940000153169.A.b.b.e.b ENSGT00950000182859.A.a.a.a ##22 Pinecone sodierfish MODERN SPECIES 1 ENSMMDG00005016442 PCDH1 (ENSMMDG00005016445) ENSMMDG00005016446 ENSMMDG00005016448 ENSMMDG00005016450 ENSMMDG00005016454 PCDH12 (ENSMMDG00005016456) ENSMMDG00005016459 LTC4S (ENSMMDG00005016463) MAML1 (ENSMMDG00005016468) canx (ENSMMDG00005016543) mgat4b (ENSMMDG00005018678) DGKQ (ENSMMDG00005018688) NFKB1 (ENSMMDG00005018695) ENSMMDG00005018699 EBF4 (ENSMMDG00005018746) ##22 ELP1 (ENSMMDG00005018839) TBC1D2 (ENSMMDG00005019658) SLC44A1 (ENSMMDG00005019662) ABCA1 (ENSMMDG00005019834) nipsnap3a (ENSMMDG00005023991) noa1 (ENSMMDG00005023992) rest (ENSMMDG00005023996) b4galt1l (ENSMMDG00005023999) exosc3 (ENSMMDG00005024003) ENSMMDG00005024007 ENSMMDG00005024009 ENSMMDG00005024012 neurog1 (ENSMMDG00005024013) ENSMMDG00005024015 ARAP3 (ENSMMDG00005024029) Percomorphaceae ANCESTRAL SPECIES 78 ENSGT00390000017284.b ENSGT00940000153322.B.d.a ENSGT00940000169511 ENSGT00940000153899.a.a ENSGT00940000159747 ENSGT00940000157712 ENSGT00940000157425.A ENSGT00950000183026.A.a.b ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000156526.a ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000153169.A.b.b.e.b ENSGT00950000182859.A.a.a.a ##22 Tiger tail seahorse MODERN SPECIES 506 GAL3ST3 (ENSHCOG00000012476) ccs (ENSHCOG00000012499) rbm14b (ENSHCOG00000012571) actn3a (ENSHCOG00000012609) ENSHCOG00000012642 wdr55 (ENSHCOG00000012660) ENSHCOG00000012670 ENSHCOG00000012673 ENSHCOG00000012693 aimp1b (ENSHCOG00000000370) sgms2b (ENSHCOG00000012755) ENSHCOG00000012781 ENSHCOG00000012806 ENSHCOG00000012821 KCNJ10 (ENSHCOG00000012863) EBF4 (ENSHCOG00000013199) ##22 ENSHCOG00000013223 ENSHCOG00000000581 exosc3 (ENSHCOG00000013389) F2RL3 (ENSHCOG00000013396) rnf130 (ENSHCOG00000013401) ENSHCOG00000013405 ENSHCOG00000000845 ENSHCOG00000013454 sqstm1 (ENSHCOG00000013492) rnf4 (ENSHCOG00000013524) selenot2 (ENSHCOG00000013542) COX18 (ENSHCOG00000013555) igfbp7 (ENSHCOG00000013565) polr2b (ENSHCOG00000013588) ABCA1 (ENSHCOG00000017057) Percomorphaceae_B ANCESTRAL SPECIES 14 ENSGT00390000003288 ENSGT00940000160403 ENSGT00940000155521.a.a ENSGT00940000153899.a.a ENSGT00940000159747 ENSGT00940000157712 ENSGT00940000157425.A ENSGT00950000183026.A.a.b ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000156526.a ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000153169.A.b.b.e.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000169511 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 ENSGT00940000159937 ENSGT00940000177365 ENSGT00940000157174.d ENSGT00940000154658.b.i.a ENSGT00950000183018.b ENSGT00390000001695 ENSGT00940000155341 ENSGT00940000155244.d ENSGT00940000153596.A ENSGT00530000063860.a ENSGT00940000164810 Ovalentaria ANCESTRAL SPECIES 15 ENSGT00940000160403 ENSGT00940000155521.a.a ENSGT00940000153899.a.a ENSGT00940000159747 ENSGT00940000157712 ENSGT00940000157425.A ENSGT00950000183026.A.a.b ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000156526.a ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000153169.A.b.b.e.b ENSGT00940000155109.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000169511 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 ENSGT00940000159937 ENSGT00940000177365 ENSGT00940000157174.d ENSGT00940000154658.b.i.a ENSGT00950000183018.b ENSGT00390000001695 ENSGT00940000155341 ENSGT00940000155244.d ENSGT00940000153596.A ENSGT00530000063860.a ENSGT00940000164810 Atherinomorphae DUPLICATION Atherinomorphae ANCESTRAL SPECIES 9 ENSGT00940000155521.a.a ENSGT00940000153899.a.a ENSGT00940000159747 ENSGT00940000157712 ENSGT00940000157425.A ENSGT00950000183026.A.a.b ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000156526.a ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000153169.A.b.b.e.b ENSGT00950000182859.A.a.a.a.b ##22 ENSGT00940000155109.b ENSGT00950000182859.A.a.a.a.a ##22 ENSGT00940000169511 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 ENSGT00940000159937 ENSGT00940000157174.d ENSGT00940000154658.b.i.a ENSGT00950000183018.b ENSGT00390000001695 ENSGT00940000155341 ENSGT00940000155244.d ENSGT00940000153596.A ENSGT00530000063860.a ENSGT00940000164810 ENSGT00940000158869 Oryzias ANCESTRAL SPECIES 164 ENSGT00940000155109.b ENSGT00950000182859.A.a.a.a.a ##22 Oryzias_a ANCESTRAL SPECIES 222 ENSGT00940000155109.b ENSGT00950000182859.A.a.a.a.a ##22 Chinese medaka MODERN SPECIES 5312 mgat4b (ENSOSIG00000008613) canx (ENSOSIG00000008878) ENSOSIG00000010002 ENSOSIG00000010019 ##22 ENSOSIG00000010020 ##22 ENSOSIG00000010021 Cyprinodontiformes ANCESTRAL SPECIES ENSGT00950000182859.A.a.a.a.a ##22 Cyprinodontoidei ANCESTRAL SPECIES ENSGT00950000182859.A.a.a.a.a ##22 Poeciliinae ANCESTRAL SPECIES 11 ENSGT00950000182859.A.a.a.a.a ##22 ENSGT00940000169511 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 ENSGT00940000170262 ENSGT00940000172107 ENSGT00940000159937 ENSGT00940000157174.d ENSGT00940000154658.b.i.a ENSGT00950000183018.b ENSGT00390000001695 ENSGT00940000158869 ENSGT00940000164810 ENSGT00530000063860.a ENSGT00940000153596.A Poecilia ANCESTRAL SPECIES 43 ENSGT00940000172107 ENSGT00940000159937 ENSGT00950000182859.A.a.a.a.a ##22 ENSGT00940000169511 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 ENSGT00940000170262 ENSGT00940000157174.d ENSGT00940000154658.b.i.a ENSGT00950000183018.b ENSGT00390000001695 ENSGT00940000158869 ENSGT00940000164810 ENSGT00530000063860.a ENSGT00940000153596.A ENSGT00940000155244.d ENSGT00940000155341 Guppy MODERN SPECIES 440 ENSPREG00000011992 ENSPREG00000011913 ##22 ENSPREG00000011875 ENSPREG00000011852 ENSPREG00000011838 neurog1 (ENSPREG00000011823) ENSPREG00000011807 SLC44A1 (ENSPREG00000011738) ABCA1 (ENSPREG00000011618) nipsnap3a (ENSPREG00000011587) ENSPREG00000011577 noa1 (ENSPREG00000011564) ENSPREG00000011527 ENSPREG00000011509 tgfbi (ENSPREG00000011486) exosc3 (ENSPREG00000011472) b4galt1l (ENSPREG00000011461) NAME_6 ANCESTRAL SPECIES ENSGT00950000182859.A.a.a.a.a ##22 Sailfin molly MODERN SPECIES 2164 ENSPLAG00000012969 ##22 Amazon molly MODERN SPECIES 1034 ENSPFOG00000023105 ##22 Platyfish MODERN SPECIES 15 ENSXMAG00000029916 ENSXMAG00000010668 ##22 ENSXMAG00000022697 ENSXMAG00000022920 ENSXMAG00000014107 ENSXMAG00000014101 neurog1 (ENSXMAG00000028096) ENSXMAG00000025715 TBC1D2 (ENSXMAG00000026272) SLC44A1 (ENSXMAG00000014677) ENSXMAG00000026678 ENSXMAG00000022260 ABCA1 (ENSXMAG00000014714) nipsnap3a (ENSXMAG00000028197) noa1 (ENSXMAG00000014913) ENSXMAG00000027965 ENSXMAG00000014930 Aplocheiloidei ANCESTRAL SPECIES ENSGT00950000182859.A.a.a.a.a ##22 Mangrove rivulus MODERN SPECIES 471 ENSKMAG00000001820 ##22 ENSKMAG00000001871 SYDE1 (ENSKMAG00000001904) ENSKMAG00000001931 dpysl4 (ENSKMAG00000001989) ##18 ENSKMAG00000002084 Atherinomorphae ANCESTRAL SPECIES 9 ENSGT00390000003288 ENSGT00940000160403 ENSGT00940000155521.a.a ENSGT00940000153899.a.a ENSGT00940000159747 ENSGT00940000157712 ENSGT00940000157425.A ENSGT00950000183026.A.a.b ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000156526.a ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000153169.A.b.b.e.b ENSGT00950000182859.A.a.a.a.b ##22 ENSGT00940000155109.b ENSGT00950000182859.A.a.a.a.a ##22 ENSGT00940000169511 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 ENSGT00940000159937 ENSGT00940000157174.d ENSGT00940000154658.b.i.a ENSGT00950000183018.b ENSGT00390000001695 ENSGT00940000155341 ENSGT00940000155244.d ENSGT00940000153596.A ENSGT00530000063860.a Oryzias ANCESTRAL SPECIES 17 ENSGT00510000048167.b.b ENSGT00390000003288 ENSGT00940000160403 ENSGT00940000155521.a.a ENSGT00940000153899.a.a ENSGT00940000159747 ENSGT00940000157712 ENSGT00950000183026.A.a.b ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000156526.a ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000153169.A.b.b.e.b ENSGT00950000182859.A.a.a.a.b ##22 Oryzias_b ANCESTRAL SPECIES 47 ENSGT00390000003288 ENSGT00940000160403 ENSGT00940000155521.a.a ENSGT00940000153899.a.a ENSGT00940000159747 ENSGT00940000157712 ENSGT00950000183026.A.a.b ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000156526.a ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000153169.A.b.b.e.b ENSGT00940000155109.b ENSGT00950000182859.A.a.a.a.b ##22 Indian medaka MODERN SPECIES 37 ENSOMEG00000022135 tmem216 (ENSOMEG00000022141) tmed9 (ENSOMEG00000022161) b4galt7 (ENSOMEG00000022170) ENSOMEG00000022187 ENSOMEG00000022205 ENSOMEG00000022223 LTC4S (ENSOMEG00000022231) ENSOMEG00000022312 canx (ENSOMEG00000022389) mgat4b (ENSOMEG00000022443) DGKQ (ENSOMEG00000022467) NFKB1 (ENSOMEG00000022508) ENSOMEG00000022533 ENSOMEG00000022560 ENSOMEG00000022594 ##22 Javanese ricefish MODERN SPECIES 1 slc25a48 (ENSOJAG00000001835) ENSOJAG00000001821 cplx2 (ENSOJAG00000001813) ENSOJAG00000001798 ENSOJAG00000001769 gm2a (ENSOJAG00000001748) PCDH12 (ENSOJAG00000001726) PCDH1 (ENSOJAG00000001705) ENSOJAG00000001686 LTC4S (ENSOJAG00000001666) ENSOJAG00000001607 ENSOJAG00000001577 mgat4b (ENSOJAG00000022654) NFKB1 (ENSOJAG00000022598) ENSOJAG00000022588 ENSOJAG00000022489 ##22 ENSOJAG00000022465 ENSOJAG00000022445 ENSOJAG00000022438 tmed9 (ENSOJAG00000022428) tmem216 (ENSOJAG00000022424) ENSOJAG00000022412 ENSOJAG00000022404 Oryzias_a ANCESTRAL SPECIES 65 ENSGT00510000048167.b.b ENSGT00390000003288 ENSGT00940000160403 ENSGT00940000155521.a.a ENSGT00940000153899.a.a ENSGT00940000159747 ENSGT00940000157712 ENSGT00950000183026.A.a.b ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000156526.a ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000153169.A.b.b.e.b ENSGT00950000182859.A.a.a.a.b ##22 Chinese medaka MODERN SPECIES 5312 mgat4b (ENSOSIG00000008613) canx (ENSOSIG00000008878) ENSOSIG00000010002 ENSOSIG00000010019 ##22 ENSOSIG00000010020 ##22 ENSOSIG00000010021 Japanese Medaka HdrR MODERN SPECIES 1 b4galt7 (ENSORLG00000011570) ENSORLG00000025070 ENSORLG00000023242 ENSORLG00000025235 LTC4S (ENSORLG00000023609) MAML1 (ENSORLG00000024588) ENSORLG00000027469 canx (ENSORLG00000018595) mgat4b (ENSORLG00000018573) DGKQ (ENSORLG00000019496) NFKB1 (ENSORLG00000030524) ENSORLG00000021832 ENSORLG00000026271 ENSORLG00000025092 ENSORLG00000028427 ENSORLG00000020414 ##22 ENSORLG00000027596 ENSORLG00000022088 ENSORLG00000028816 Cyprinodontiformes ANCESTRAL SPECIES 8 ENSGT00940000160403 ENSGT00940000155521.a.a ENSGT00940000153899.a.a ENSGT00940000159747 ENSGT00940000157712 ENSGT00940000157425.A ENSGT00950000183026.A.a.b ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000156526.a ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000153169.A.b.b.e.b ENSGT00940000153169.A.b.b.f ENSGT00950000182859.A.a.a.a.b ##22 ENSGT00940000169511 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 ENSGT00940000159937 ENSGT00940000157174.d ENSGT00940000154658.b.i.a ENSGT00950000183018.b ENSGT00390000001695 ENSGT00940000158869 ENSGT00940000164810 ENSGT00530000063860.a ENSGT00940000153596.A ENSGT00940000155244.d ENSGT00940000155341 Cyprinodontoidei ANCESTRAL SPECIES 23 ENSGT00950000182859.A.a.a.a.b ##22 ENSGT00940000169511 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 ENSGT00940000159937 ENSGT00940000157174.d ENSGT00940000154658.b.i.a ENSGT00950000183018.b ENSGT00390000001695 ENSGT00940000158869 ENSGT00940000164810 ENSGT00530000063860.a ENSGT00940000153596.A ENSGT00940000155244.d ENSGT00940000155341 Poeciliinae ANCESTRAL SPECIES ENSGT00950000182859.A.a.a.a.b ##22 Poecilia ANCESTRAL SPECIES ENSGT00950000182859.A.a.a.a.b ##22 NAME_6 ANCESTRAL SPECIES ENSGT00950000182859.A.a.a.a.b ##22 Amazon molly MODERN SPECIES 1494 ENSPFOG00000021873 ##22 NAME_4 ANCESTRAL SPECIES 120 ENSGT00950000182859.A.a.a.a.b ##22 ENSGT00940000169511 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 ENSGT00940000159937 ENSGT00940000157174.d ENSGT00940000154658.b.i.a ENSGT00950000183018.b ENSGT00390000001695 ENSGT00940000158869 ENSGT00940000164810 ENSGT00530000063860.a ENSGT00940000153596.A ENSGT00940000155244.d ENSGT00940000155341 Sheepshead minnow MODERN SPECIES 171 glra1 (ENSCVAG00000006211) g3bp1 (ENSCVAG00000006194) sparc (ENSCVAG00000006179) atox1 (ENSCVAG00000006172) SLC36A1 (ENSCVAG00000000178) mtnr1al (ENSCVAG00000006149) FAT2 (ENSCVAG00000005460) lman2 (ENSCVAG00000005444) HTR4 (ENSCVAG00000005422) SLC26A2 (ENSCVAG00000005401) EBF4 (ENSCVAG00000005393) ##22 ENSCVAG00000005349 ENSCVAG00000005337 ENSCVAG00000005325 neurog1 (ENSCVAG00000005319) ENSCVAG00000005311 SLC44A1 (ENSCVAG00000005295) ABCA1 (ENSCVAG00000005271) nipsnap3a (ENSCVAG00000005118) noa1 (ENSCVAG00000005104) ENSCVAG00000005090 ENSCVAG00000005072 ENSCVAG00000005014 tgfbi (ENSCVAG00000004988) exosc3 (ENSCVAG00000004942) b4galt1l (ENSCVAG00000004938) Mummichog MODERN SPECIES 582 ENSFHEG00000013598 ##22 Aplocheiloidei ANCESTRAL SPECIES 13 ENSGT00940000158129 ENSGT00510000048167.b.b ENSGT00390000003288 ENSGT00940000160403 ENSGT00940000155521.a.a ENSGT00940000153899.a.a ENSGT00940000159747 ENSGT00940000157712 ENSGT00950000183026.A.a.b ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000156526.a ENSGT00940000158625 ENSGT00940000153169.A.b.b.f ENSGT00950000182859.A.a.a.a.b ##22 ENSGT00940000169511 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 ENSGT00940000159937 ENSGT00940000157174.d ENSGT00940000154658.b.i.a ENSGT00950000183018.b ENSGT00390000001695 ENSGT00940000158869 ENSGT00940000164810 ENSGT00530000063860.a ENSGT00940000153596.A ENSGT00940000155244.d Mangrove rivulus MODERN SPECIES 416 ENSKMAG00000007481 ##22 ENSKMAG00000007525 ENSKMAG00000007594 ENSKMAG00000007646 nmnat2 (ENSKMAG00000007723) Turquoise killifish MODERN SPECIES 1610 tmem216 (ENSNFUG00015000692) TMED9 (ENSNFUG00015000701) B4GALT7 (ENSNFUG00015000722) ENSNFUG00015000729 ENSNFUG00015000732 EMX3 (ENSNFUG00015000734) ENSNFUG00015000735 CABZ01005777.1 (ENSNFUG00015000737) LTC4S (ENSNFUG00015000740) ENSNFUG00015000742 ENSNFUG00015000745 CANX (ENSNFUG00015000772) mgat4b (ENSNFUG00015000853) NFKB1 (ENSNFUG00015000976) ENSNFUG00015001455 ENSNFUG00015001519 ##22 ENSNFUG00015001638 MATR3L1.1 (ENSNFUG00015001659) PAIP2 (ENSNFUG00015001676) NEUROG1 (ENSNFUG00015001682) ENSNFUG00015001686 TBC1D2 (ENSNFUG00015001697) SLC44A1 (ENSNFUG00015001707) ABCA1B (ENSNFUG00015001724) NIPSNAP3 (ENSNFUG00015001752) NOA1 (ENSNFUG00015001762) ARAP3 (ENSNFUG00015001792) cebp1 (ENSNFUG00015001871) OLA.7742 (ENSNFUG00015001876) TGFBI (ENSNFUG00015001906) b4galt1l (ENSNFUG00015001947) Ovalentaria_B ANCESTRAL SPECIES 13 ENSGT00940000160403 ENSGT00940000155521.a.a ENSGT00940000153899.a.a ENSGT00940000159747 ENSGT00940000157712 ENSGT00940000157425.A ENSGT00950000183026.A.a.b ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000156526.a ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000153169.A.b.b.e.b ENSGT00940000155109.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000169511 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 ENSGT00940000159937 ENSGT00940000177365 ENSGT00940000157174.d ENSGT00940000154658.b.i.a ENSGT00950000183018.b ENSGT00390000001695 ENSGT00940000155341 ENSGT00940000155244.d ENSGT00940000153596.A ENSGT00530000063860.a ENSGT00940000164810 Cichlidae ANCESTRAL SPECIES 8 ENSGT00390000003288 ENSGT00940000160403 ENSGT00940000155521.a.a ENSGT00940000153899.a.a ENSGT00940000159747 ENSGT00940000157712 ENSGT00940000157425.A ENSGT00950000183026.A.a.b ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000156526.a ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000155109.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000169511 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 ENSGT00940000159937 ENSGT00940000177365 ENSGT00940000157174.d ENSGT00940000154658.b.i.a ENSGT00950000183018.b ENSGT00390000001695 ENSGT00940000155341 ENSGT00940000155244.d ENSGT00940000153596.A ENSGT00530000063860.a ENSGT00390000013344 Pseudocrenilabrinae ANCESTRAL SPECIES 27 ENSGT00390000003288 ENSGT00940000160403 ENSGT00940000155521.a.a ENSGT00940000153899.a.a ENSGT00940000159747 ENSGT00940000157712 ENSGT00940000157425.A ENSGT00950000183026.A.a.b ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000156526.a ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000155109.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000169511 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 ENSGT00940000159937 ENSGT00940000177365 ENSGT00940000157174.d ENSGT00940000154658.b.i.a ENSGT00950000183018.b ENSGT00390000001695 ENSGT00940000155341 ENSGT00940000155244.d ENSGT00940000153596.A ENSGT00530000063860.a ENSGT00390000013344 Pseudocrenilabrinae_A ANCESTRAL SPECIES 31 ENSGT00940000181346 ENSGT00690000103768 ENSGT00940000155521.a.a ENSGT00940000153899.a.a ENSGT00940000159747 ENSGT00940000157712 ENSGT00940000157425.A ENSGT00950000183026.A.a.b ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000156526.a ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000155109.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000169511 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 ENSGT00940000159937 ENSGT00940000177365 ENSGT00940000157174.d ENSGT00940000154658.b.i.a ENSGT00950000183018.b ENSGT00390000001695 ENSGT00940000155341 ENSGT00940000155244.d ENSGT00940000153596.A ENSGT00530000063860.a ENSGT00390000013344 Haplochromini ANCESTRAL SPECIES 25 ENSGT00940000160403 ENSGT00940000155521.a.a ENSGT00940000179353 ENSGT00940000153899.a.a ENSGT00940000159747 ENSGT00940000157712 ENSGT00940000157425.A ENSGT00950000183026.A.a.b ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000156526.a ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000155109.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000169511 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 ENSGT00940000159937 ENSGT00940000177365 ENSGT00940000157174.d ENSGT00940000154658.b.i.a ENSGT00950000183018.b ENSGT00390000001695 ENSGT00940000155341 ENSGT00940000155244.d ENSGT00940000153596.A ENSGT00530000063860.a ENSGT00390000013344 Haplochromini_A ANCESTRAL SPECIES 28 ENSGT00940000160403 ENSGT00940000155521.a.a ENSGT00940000179353 ENSGT00940000153899.a.a ENSGT00940000159747 ENSGT00940000157712 ENSGT00940000157425.A ENSGT00950000183026.A.a.b ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000156526.a ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000155109.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000169511 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 ENSGT00940000159937 ENSGT00940000177365 ENSGT00940000157174.d ENSGT00940000154658.b.i.a ENSGT00950000183018.b ENSGT00390000001695 ENSGT00940000155341 ENSGT00940000155244.d ENSGT00940000153596.A ENSGT00530000063860.a ENSGT00390000013344 Haplochromini_B ANCESTRAL SPECIES 45 ENSGT00940000160403 ENSGT00940000155521.a.a ENSGT00940000179353 ENSGT00940000153899.a.a ENSGT00940000159747 ENSGT00940000157712 ENSGT00940000157425.A ENSGT00950000183026.A.a.b ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000156526.a ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000155109.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000169511 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 ENSGT00940000159937.e ENSGT00940000177365.a ENSGT00940000159937.f ENSGT00940000177365.b.b.a ENSGT00940000157174.d ENSGT00940000154658.b.i.a ENSGT00950000183018.b ENSGT00390000001695 ENSGT00940000155341 ENSGT00940000155244.d ENSGT00940000153596.A Eastern happy MODERN SPECIES 11 ENSACLG00000016967 PCDH1 (ENSACLG00000016940) ENSACLG00000016851 tmem216 (ENSACLG00000016820) tmed9 (ENSACLG00000016806) b4galt7 (ENSACLG00000016773) emx3 (ENSACLG00000016742) ENSACLG00000016715 LTC4S (ENSACLG00000016707) MAML1 (ENSACLG00000016672) canx (ENSACLG00000016610) mgat4b (ENSACLG00000016482) DGKQ (ENSACLG00000016414) NFKB1 (ENSACLG00000016324) ENSACLG00000016262 ENSACLG00000016208 ##22 ENSACLG00000016125 ENSACLG00000015903 ENSACLG00000015884 ENSACLG00000015874 neurog1 (ENSACLG00000015850) TBC1D2 (ENSACLG00000015741) ENSACLG00000015721 ENSACLG00000015708 ENSACLG00000015682 ENSACLG00000015662 ENSACLG00000015640 SLC44A1 (ENSACLG00000015591) ABCA1 (ENSACLG00000015417) nipsnap3a (ENSACLG00000015397) noa1 (ENSACLG00000015378) Zebra mbuna MODERN SPECIES 1102 ENSMZEG00005004284 PCDH1 (ENSMZEG00005004220) ENSMZEG00005004199 tmem216 (ENSMZEG00005004180) TMED9 (ENSMZEG00005004161) b4galt7 (ENSMZEG00005004139) emx3 (ENSMZEG00005004124) ENSMZEG00005004113 LTC4S (ENSMZEG00005004105) MAML1 (ENSMZEG00005004071) canx (ENSMZEG00005004048) mgat4b (ENSMZEG00005003994) DGKQ (ENSMZEG00005003967) NFKB1 (ENSMZEG00005003891) ENSMZEG00005003871 ENSMZEG00005003833 ##22 ENSMZEG00005003813 ENSMZEG00005003796 ENSMZEG00005003673 ENSMZEG00005003652 neurog1 (ENSMZEG00005003639) ENSMZEG00005003635 ENSMZEG00005003619 ENSMZEG00005003579 ENSMZEG00005003572 PCGF3 (ENSMZEG00005003535) SLC49A3 (ENSMZEG00005003526) NCBP1 (ENSMZEG00005003469) TSTD2 (ENSMZEG00005003462) hopx (ENSMZEG00005003454) arl9 (ENSMZEG00005003443) P. nyererei MODERN SPECIES 374 PCDH1 (ENSPNYG00000016296) ENSPNYG00000016274 ENSPNYG00000016260 tmem216 (ENSPNYG00000016231) tmed9 (ENSPNYG00000016215) b4galt7 (ENSPNYG00000016193) emx3 (ENSPNYG00000016181) ENSPNYG00000016169 LTC4S (ENSPNYG00000016155) MAML1 (ENSPNYG00000016125) canx (ENSPNYG00000016110) mgat4b (ENSPNYG00000016071) DGKQ (ENSPNYG00000016046) NFKB1 (ENSPNYG00000015980) ENSPNYG00000015942 ENSPNYG00000015899 ##22 ENSPNYG00000015889 ENSPNYG00000015855 ENSPNYG00000015843 ENSPNYG00000015792 neurog1 (ENSPNYG00000015779) ENSPNYG00000015766 ENSPNYG00000015756 Burton s mouthbrooder MODERN SPECIES 486 tmem216 (ENSHBUG00000004417) tmed9 (ENSHBUG00000004407) b4galt7 (ENSHBUG00000004386) emx3 (ENSHBUG00000004351) ENSHBUG00000004337 LTC4S (ENSHBUG00000004326) MAML1 (ENSHBUG00000004311) canx (ENSHBUG00000004272) mgat4b (ENSHBUG00000004245) DGKQ (ENSHBUG00000004203) NFKB1 (ENSHBUG00000004157) ENSHBUG00000004096 ENSHBUG00000004084 ##22 ENSHBUG00000004043 ENSHBUG00000000095 ENSHBUG00000003991 neurog1 (ENSHBUG00000003982) ENSHBUG00000003972 Lyretail cichlid MODERN SPECIES 341 ENSNBRG00000013827 PCDH1 (ENSNBRG00000013804) ENSNBRG00000013792 tmem216 (ENSNBRG00000013774) tmed9 (ENSNBRG00000013768) b4galt7 (ENSNBRG00000013752) ENSNBRG00000013698 ENSNBRG00000013670 LTC4S (ENSNBRG00000013645) MAML1 (ENSNBRG00000013633) canx (ENSNBRG00000013618) mgat4b (ENSNBRG00000013586) DGKQ (ENSNBRG00000013510) NFKB1 (ENSNBRG00000013462) ENSNBRG00000013447 ENSNBRG00000013414 ##22 ENSNBRG00000013399 ENSNBRG00000013335 ENSNBRG00000013323 neurog1 (ENSNBRG00000013315) TBC1D2 (ENSNBRG00000013288) SLC44A1 (ENSNBRG00000013177) ENSNBRG00000013157 Nile tilapia MODERN SPECIES 11 tmem216 (ENSONIG00000004303) tmed9 (ENSONIG00000004305) b4galt7 (ENSONIG00000004308) emx3 (ENSONIG00000029650) ENSONIG00000004314 ENSONIG00000034776 LTC4S (ENSONIG00000004315) MAML1 (ENSONIG00000004317) canx (ENSONIG00000004319) mgat4b (ENSONIG00000004334) DGKQ (ENSONIG00000004338) ENSONIG00000037579 NFKB1 (ENSONIG00000004349) UBE2D3 (ENSONIG00000004373) ENSONIG00000036649 ENSONIG00000004376 ##22 ENSONIG00000016539 ENSONIG00000004400 ENSONIG00000035796 ENSONIG00000004419 PAIP2 (ENSONIG00000039154) neurog1 (ENSONIG00000038395) TBC1D2 (ENSONIG00000004425) SLC44A1 (ENSONIG00000001631) ABCA1 (ENSONIG00000001599) nipsnap3a (ENSONIG00000001595) noa1 (ENSONIG00000001590) rest (ENSONIG00000001589) b4galt1l (ENSONIG00000001585) exosc3 (ENSONIG00000035455) tgfbi (ENSONIG00000001569) Midas cichlid MODERN SPECIES 453 ENSACIG00000023470 ENSACIG00000023456 NFKB1 (ENSACIG00000023434) ENSACIG00000023428 ENSACIG00000023407 ##22 ENSACIG00000023260 cox11 (ENSACIG00000023250) ENSACIG00000023248 CBX2 (ENSACIG00000023237) nog3 (ENSACIG00000023232) ENSACIG00000023223 ENSACIG00000023210 TMEM100 (ENSACIG00000023203) SMIM36 (ENSACIG00000023201) HLF (ENSACIG00000023195) STXBP4 (ENSACIG00000023157) OXER1 (ENSACIG00000023149) Pomacentridae ANCESTRAL SPECIES 163 ENSGT00940000155521.a.a ENSGT00940000153899.a.a ENSGT00940000159747.f ENSGT00940000157712 ENSGT00940000157425.A ENSGT00950000183026.A.a.b ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000156526.a ENSGT00940000159492 ENSGT00940000158625.h ENSGT00940000153169.A.b.b.e.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000169511 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 Pomacentridae_A ANCESTRAL SPECIES 182 ENSGT00940000155521.a.a ENSGT00940000153899.a.a ENSGT00940000159747.f ENSGT00940000157712 ENSGT00940000157425.A ENSGT00950000183026.A.a.b ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000156526.a ENSGT00940000159492 ENSGT00940000158625.h ENSGT00940000153169.A.b.b.e.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000169511 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 Amphiprion ANCESTRAL SPECIES 213 ENSGT00940000153899.a.a ENSGT00940000159747.f ENSGT00940000157712 ENSGT00940000157425.A ENSGT00950000183026.A.a.b ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000156526.a ENSGT00940000159492 ENSGT00940000158625.h ENSGT00940000153169.A.b.b.e.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000169511.b ENSGT00940000169511.a ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 Clown anemonefish MODERN SPECIES 2414 mgat4b (ENSAOCG00000005988) DGKQ (ENSAOCG00000006200) NFKB1 (ENSAOCG00000006283) ENSAOCG00000006314 ENSAOCG00000006350 ##22 Orange clownfish MODERN SPECIES 4 tmed9 (ENSAPEG00000004335) b4galt7 (ENSAPEG00000004311) emx3 (ENSAPEG00000004282) ENSAPEG00000004247 ENSAPEG00000004224 LTC4S (ENSAPEG00000004210) MAML1 (ENSAPEG00000004199) canx (ENSAPEG00000004186) ENSAPEG00000004157 mgat4b (ENSAPEG00000004111) ENSAPEG00000004095 ENSAPEG00000004063 ENSAPEG00000004032 NFKB1 (ENSAPEG00000004000) ENSAPEG00000003941 ENSAPEG00000003875 ##22 ENSAPEG00000003849 ENSAPEG00000003827 ENSAPEG00000003791 ENSAPEG00000003779 neurog1 (ENSAPEG00000003773) ENSAPEG00000003740 ldhd (ENSAPEG00000003712) ENSAPEG00000003686 mlsl (ENSAPEG00000003627) hars (ENSAPEG00000003586) dnd1 (ENSAPEG00000003554) gfra3 (ENSAPEG00000003517) hvcn1 (ENSAPEG00000003497) ENSAPEG00000003484 ENSAPEG00000003478 Spiny chromis MODERN SPECIES 1477 ENSAPOG00000004211 ENSAPOG00000004221 ENSAPOG00000004282 ##22 Bicolor damselfish MODERN SPECIES 1164 ENSSPAG00000011168 ##22 ENSSPAG00000011158 ENSSPAG00000011135 ENSSPAG00000011093 ENSSPAG00000011080 ENSSPAG00000011048 ENSSPAG00000011039 ENSSPAG00000011031 ENSSPAG00000011018 ENSSPAG00000011012 ENSSPAG00000011005 ENSSPAG00000010996 pcdh2ab8 (ENSSPAG00000010986) ENSSPAG00000010979 Percomorphaceae_C ANCESTRAL SPECIES 16 ENSGT00390000003288 ENSGT00940000160403 ENSGT00940000155521.a.a ENSGT00940000153899.a.a ENSGT00940000159747 ENSGT00940000157712 ENSGT00940000157425.A ENSGT00950000183026.A.a.b ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000156526.a ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000153169.A.b.b.e.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000169511 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 ENSGT00940000159937 ENSGT00940000157174.d ENSGT00940000154658.b.i.a ENSGT00950000183018.b ENSGT00390000001695 ENSGT00940000155341 ENSGT00940000155244.d ENSGT00940000153596.A ENSGT00530000063860.a ENSGT00940000164810 ENSGT00940000158869 Eupercaria ANCESTRAL SPECIES 12 ENSGT00390000003288 ENSGT00940000160403 ENSGT00940000155521.a.a ENSGT00940000153899.a.a ENSGT00940000159747 ENSGT00940000157712 ENSGT00940000157425.A ENSGT00950000183026.A.a.b ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000156526.a ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000155109.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000169511 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 ENSGT00940000158869 ENSGT00940000164810 ENSGT00530000063860.a ENSGT00940000153596.A ENSGT00940000155244.d ENSGT00940000155341 ENSGT00390000001695 ENSGT00950000183018.b ENSGT00940000154658.b.i.a ENSGT00940000157174.d ENSGT00940000159937 Eupecaria_A ANCESTRAL SPECIES 13 ENSGT00940000160403 ENSGT00940000155521.a.a ENSGT00940000153899.a.a ENSGT00940000159747 ENSGT00940000157712 ENSGT00940000157425.A ENSGT00950000183026.A.a.b ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000156526.a ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000153169.A.b.b.e.b ENSGT00940000155109.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000169511 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 ENSGT00940000158869 ENSGT00940000164810 ENSGT00530000063860.a ENSGT00940000153596.A ENSGT00940000155244.d ENSGT00940000155341 ENSGT00390000001695 ENSGT00950000183018.b ENSGT00940000154658.b.i.a ENSGT00940000157174.d ENSGT00940000159937 Ballan wrasse MODERN SPECIES 113 tmem216 (ENSLBEG00000019120) tmed9 (ENSLBEG00000019077) b4galt7 (ENSLBEG00000018940) emx3 (ENSLBEG00000018910) ENSLBEG00000018858 ENSLBEG00000018842 ENSLBEG00000018827 LTC4S (ENSLBEG00000018819) MAML1 (ENSLBEG00000018807) canx (ENSLBEG00000018739) mgat4b (ENSLBEG00000018661) DGKQ (ENSLBEG00000018579) NFKB1 (ENSLBEG00000018512) ENSLBEG00000018466 ENSLBEG00000018409 ##22 ENSLBEG00000018361 ENSLBEG00000018267 ENSLBEG00000018227 dnali1 (ENSLBEG00000018208) neurog1 (ENSLBEG00000018191) Eupecaria_B ANCESTRAL SPECIES 13 ENSGT00940000160403 ENSGT00940000155521.a.a ENSGT00940000153899.a.a ENSGT00940000159747 ENSGT00940000157712 ENSGT00940000157425.A ENSGT00950000183026.A.a.b ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000156526.a ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000153169.A.b.b.e.b ENSGT00940000155109.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000169511 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 ENSGT00940000158869 ENSGT00940000164810 ENSGT00530000063860.a ENSGT00940000153596.A ENSGT00940000155244.d ENSGT00940000155341 ENSGT00390000001695 ENSGT00950000183018.b ENSGT00940000154658.b.i.a ENSGT00940000157174.d ENSGT00940000159937 Perciformes ANCESTRAL SPECIES 13 ENSGT00390000003288 ENSGT00940000160403 ENSGT00940000155521.a.a ENSGT00940000153899.a.a ENSGT00940000159747 ENSGT00940000157712 ENSGT00940000157425.A ENSGT00950000183026.A.a.b ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000156526.a ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000155109.b ENSGT00950000182859.A.a.a.a ##22 Cottioidei ANCESTRAL SPECIES 83 ENSGT00390000003288 ENSGT00940000160403 ENSGT00940000155521.a.a ENSGT00940000153899.a.a ENSGT00940000159747 ENSGT00940000157712 ENSGT00940000157425.A ENSGT00950000183026.A.a.b ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000156526.a ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000155109.b ENSGT00950000182859.A.a.a.a ##22 Lumpfish MODERN SPECIES 1 tmed9 (ENSCLMG00005016976) b4galt7 (ENSCLMG00005016978) ENSCLMG00005016981 emx3 (ENSCLMG00005016982) ENSCLMG00005016984 ENSCLMG00005016986 LTC4S (ENSCLMG00005016988) MAML1 (ENSCLMG00005016991) canx (ENSCLMG00005016994) ENSCLMG00005017143 ENSCLMG00005017145 mgat4b (ENSCLMG00005017147) DGKQ (ENSCLMG00005017153) NFKB1 (ENSCLMG00005017167) ENSCLMG00005017760 ENSCLMG00005017769 ##22 Stickleback MODERN SPECIES 3 fermt3b (ENSGACG00000016924) FLRT1 (ENSGACG00000016923) macrod1 (ENSGACG00000016922) ENSGACG00000016919 ccdc88b (ENSGACG00000016915) rom1b (ENSGACG00000016903) ENSGACG00000016902 ENSGACG00000016901 LTC4S (ENSGACG00000016900) MAML1 (ENSGACG00000016896) canx (ENSGACG00000016892) mgat4b (ENSGACG00000016886) DGKQ (ENSGACG00000016877) NFKB1 (ENSGACG00000016876) ENSGACG00000016868 ENSGACG00000016862 ##22 ENSGACG00000016859 slc25a48 (ENSGACG00000016856) glra1 (ENSGACG00000016854) g3bp1 (ENSGACG00000016848) sparc (ENSGACG00000016847) SLC36A1 (ENSGACG00000016829) mtnr1al (ENSGACG00000016828) FAT2 (ENSGACG00000016824) lman2 (ENSGACG00000016821) HTR4 (ENSGACG00000016819) SLC26A2 (ENSGACG00000016814) pde6a (ENSGACG00000016811) ENSGACG00000016810 ENSGACG00000016808 ELP1 (ENSGACG00000016803) Perciformes_a ANCESTRAL SPECIES 11 ENSGT00390000003288 ENSGT00940000160403 ENSGT00940000155521.a.a ENSGT00940000153899.a.a ENSGT00940000159747 ENSGT00940000157712 ENSGT00940000157425.A ENSGT00950000183026.A.a.b ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000156526.a ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000153169.A.b.b.e.b ENSGT00950000182859.A.a.a.a ##22 Channel bull blenny MODERN SPECIES 202 ENSCGOG00000007194 exosc3 (ENSCGOG00000007192) DGKQ (ENSCGOG00000007184) ENSCGOG00000007180 ##22 ENSCGOG00000007179 ENSCGOG00000007178 ENSCGOG00000007177 ENSCGOG00000007114 ##22 Pike perch MODERN SPECIES 248 ENSSLUG00000014252 ENSSLUG00000014246 DGKQ (ENSSLUG00000014225) NFKB1 (ENSSLUG00000014200) ENSSLUG00000014049 ENSSLUG00000014030 ##22 Eupecaria_C ANCESTRAL SPECIES 12 ENSGT00940000160403 ENSGT00940000155521.a.a ENSGT00940000153899.a.a ENSGT00940000159747 ENSGT00940000157712 ENSGT00940000157425.A ENSGT00950000183026.A.a.b ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000156526.a ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000153169.A.b.b.e.b ENSGT00940000155109.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000169511 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 ENSGT01050000244840.A.b.a ENSGT00940000157465 ENSGT00940000158554 ENSGT00940000177214 ENSGT00390000002781 ENSGT00390000010318 ENSGT00390000011725.c ENSGT00530000063506.A ENSGT00530000063555.A.a.a ENSGT00950000183132.C ENSGT01030000234799 Gilthead seabream MODERN SPECIES 9 ENSSAUG00010005812 tmed9 (ENSSAUG00010005808) tmem216 (ENSSAUG00010005806) TMED9 (ENSSAUG00010005802) b4galt7 (ENSSAUG00010005797) emx3 (ENSSAUG00010005796) ENSSAUG00010005794 LTC4S (ENSSAUG00010005787) ENSSAUG00010005784 MAML1 (ENSSAUG00010005783) canx (ENSSAUG00010005713) mgat4b (ENSSAUG00010005508) DGKQ (ENSSAUG00010005502) NFKB1 (ENSSAUG00010005489) ENSSAUG00010004947 ENSSAUG00010004928 ##22 ENSSAUG00010004927 ENSSAUG00010004925 ENSSAUG00010004920 ENSSAUG00010004915 ENSSAUG00010004912 ENSSAUG00010004907 ENSSAUG00010004906 tgfbi (ENSSAUG00010004895) ENSSAUG00010004882 ENSSAUG00010004879 ENSSAUG00010003361 ENSSAUG00010003347 ENSSAUG00010003346 ENSSAUG00010003342 polr2b (ENSSAUG00010003334) Eupercaria_incertae_sedis ANCESTRAL SPECIES 14 ENSGT00390000003288 ENSGT00940000160403 ENSGT00940000155521.a.a ENSGT00940000153899.a.a ENSGT00940000159747 ENSGT00940000157712 ENSGT00940000157425.A ENSGT00950000183026.A.a.b ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000156526.a ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000155109.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000169511 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 ENSGT01050000244840.A.b.a ENSGT00940000157465 ENSGT00940000158554 ENSGT00940000177214 ENSGT00390000002781 ENSGT00390000010318 ENSGT00390000011725.c ENSGT00530000063506.A ENSGT00530000063555.A.a.a ENSGT00950000183132.C ENSGT01030000234799 Large yellow croaker MODERN SPECIES ENSLCRG00005000310 ENSLCRG00005000314 ENSLCRG00005000316 ENSLCRG00005000320 tmem216 (ENSLCRG00005000324) tmed9 (ENSLCRG00005000329) b4galt7 (ENSLCRG00005000335) emx3 (ENSLCRG00005000342) ENSLCRG00005000343 LTC4S (ENSLCRG00005000346) MAML1 (ENSLCRG00005000350) canx (ENSLCRG00005000360) mgat4b (ENSLCRG00005000407) NFKB1 (ENSLCRG00005000662) ENSLCRG00005000753 ENSLCRG00005000939 ##22 ENSLCRG00005000950 ENSLCRG00005000965 ENSLCRG00005000974 ENSLCRG00005000986 ENSLCRG00005000990 neurog1 (ENSLCRG00005000993) F2RL3 (ENSLCRG00005000994) ENSLCRG00005000998 ENSLCRG00005001000 ENSLCRG00005001005 ARAP3 (ENSLCRG00005001049) TBC1D2 (ENSLCRG00005001144) SLC44A1 (ENSLCRG00005001149) ABCA1 (ENSLCRG00005001237) nipsnap3a (ENSLCRG00005001453) European seabass MODERN SPECIES 12 ENSDLAG00005017516 ENSDLAG00005017536 ENSDLAG00005029692 ENSDLAG00005031216 ENSDLAG00005030962 b4galt7 (ENSDLAG00005027918) ENSDLAG00005032177 ENSDLAG00005028311 ENSDLAG00005018530 ENSDLAG00005018540 canx (ENSDLAG00005017668) mgat4b (ENSDLAG00005018580) ENSDLAG00005019443 ENSDLAG00005019478 ENSDLAG00005019558 ENSDLAG00005019614 ##22 ENSDLAG00005035059 ENSDLAG00005008472 ENSDLAG00005009993 tgfbi (ENSDLAG00005030215) ENSDLAG00005033633 ENSDLAG00005032833 ENSDLAG00005026990 ENSDLAG00005003163 ENSDLAG00005032287 SLC44A1 (ENSDLAG00005003400) ENSDLAG00005027122 NIPSNAP3B (ENSDLAG00005026799) noa1 (ENSDLAG00005011470) rest (ENSDLAG00005027077) b4galt1l (ENSDLAG00005002512) Percomorphaceae_D ANCESTRAL SPECIES 17 ENSGT00940000160403 ENSGT00940000155521.a.a ENSGT00940000175795 ENSGT00940000153899.a.a ENSGT00940000159747 ENSGT00940000157712 ENSGT00940000157425.A ENSGT00950000183026.A.a.b ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000156526.a ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000153169.A.b.b.e.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000169511 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 ENSGT00940000159937 ENSGT00940000157174.d ENSGT00940000154658.b.i.a ENSGT00950000183018.b ENSGT00390000001695 ENSGT00940000155341 ENSGT00940000155244.d ENSGT00940000153596.A ENSGT00530000063860.a ENSGT00940000164810 ENSGT00940000158869 Carangaria ANCESTRAL SPECIES 15 ENSGT00390000003288 ENSGT00940000160403 ENSGT00940000155521.a.a ENSGT00940000153899.a.a ENSGT00940000159747 ENSGT00940000157712 ENSGT00940000157425.A ENSGT00950000183026.A.a.b ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000156526.a ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000153169.A.b.b.e.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000169511 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 ENSGT00940000159937 ENSGT00940000157174.d ENSGT00940000154658.b.i.a.h ENSGT00950000183018.b ENSGT00390000001695 ENSGT00940000155341 ENSGT00940000155244.d ENSGT00940000153596.A ENSGT00530000063860.a ENSGT00940000164810 ENSGT00940000158869 Pleuronectoidei ANCESTRAL SPECIES ENSGT00950000182859.A.a.a.a ##22 Turbot MODERN SPECIES 4 ENSSMAG00000029343 RNF130 (ENSSMAG00000024891) ENSSMAG00000025438 ENSSMAG00000036047 ENSSMAG00000023085 ENSSMAG00000028608 nipsnap3a (ENSSMAG00000034958) noa1 (ENSSMAG00000037313) rest (ENSSMAG00000031492) b4galt1l (ENSSMAG00000032284) exosc3 (ENSSMAG00000023796) ENSSMAG00000029945 ENSSMAG00000028932 ENSSMAG00000006253 ENSSMAG00000031359 ENSSMAG00000006097 ##22 ENSSMAG00000006078 ENSSMAG00000032935 ENSSMAG00000036257 ENSSMAG00000006049 ENSSMAG00000006037 ENSSMAG00000028744 ENSSMAG00000006012 ENSSMAG00000005971 ENSSMAG00000005820 ENSSMAG00000005758 ENSSMAG00000005812 ENSSMAG00000035912 ENSSMAG00000026109 ENSSMAG00000006811 ENSSMAG00000006786 Tongue sole MODERN SPECIES 6 ENSCSEG00000005373 TBC1D9B (ENSCSEG00000005382) rnf130 (ENSCSEG00000005413) F2RL3 (ENSCSEG00000005425) TBC1D2 (ENSCSEG00000005428) SLC44A1 (ENSCSEG00000005435) ABCA1 (ENSCSEG00000005451) nipsnap3a (ENSCSEG00000005511) noa1 (ENSCSEG00000005517) rest (ENSCSEG00000005522) b4galt1l (ENSCSEG00000005529) exosc3 (ENSCSEG00000005539) tgfbi (ENSCSEG00000005542) ENSCSEG00000005554 ARAP3 (ENSCSEG00000005569) ENSCSEG00000005609 ##22 ENSCSEG00000005626 ubl3b (ENSCSEG00000005632) FOXO4 (ENSCSEG00000005641) ENSCSEG00000005645 zgc:92907 (ENSCSEG00000005652) rap2c (ENSCSEG00000005653) mbnl3 (ENSCSEG00000005665) hs6st2 (ENSCSEG00000005681) zgc:153018 (ENSCSEG00000005682) ENSCSEG00000005686 nudt22 (ENSCSEG00000005696) dnajc4 (ENSCSEG00000005701) ENSCSEG00000005705 stx5a (ENSCSEG00000005715) zgc:162144 (ENSCSEG00000005710) Carangaria_A ANCESTRAL SPECIES 17 ENSGT00390000003288 ENSGT00940000160403 ENSGT00940000155521.a.a ENSGT00940000153899.a.a ENSGT00940000159747 ENSGT00940000157712 ENSGT00940000157425.A ENSGT00950000183026.A.a.b ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000156526.a ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000153169.A.b.b.e.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000169511 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 ENSGT00940000159937 ENSGT00940000157174.d ENSGT00940000154658.b.i.a.h ENSGT00950000183018.b ENSGT00390000001695 ENSGT00940000155341 ENSGT00940000155244.d ENSGT00940000153596.A ENSGT00530000063860.a ENSGT00940000164810 ENSGT00940000158869 Seriola ANCESTRAL SPECIES 125 ENSGT00940000158554 ENSGT00940000157465 ENSGT01050000244840.A.b.a ENSGT00940000158869 ENSGT00940000164810 ENSGT00530000063860.a ENSGT00940000153596.A ENSGT00940000155244.d ENSGT00940000155341 ENSGT00390000001695 ENSGT00950000183018.b ENSGT00940000154658.b.i.a.h ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000153169.A.b.b.e.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000169511 ENSGT00940000153322.B.d.a Greater amberjack MODERN SPECIES 127 TBC1D9B (ENSSDUG00000016155) rnf130 (ENSSDUG00000016100) F2RL3 (ENSSDUG00000016088) ARAP3 (ENSSDUG00000015977) ENSSDUG00000015951 tgfbi (ENSSDUG00000015905) exosc3 (ENSSDUG00000015892) b4galt1l (ENSSDUG00000015879) rest (ENSSDUG00000015873) noa1 (ENSSDUG00000015865) nipsnap3a (ENSSDUG00000015845) ABCA1 (ENSSDUG00000015752) DGKQ (ENSSDUG00000015709) NFKB1 (ENSSDUG00000015678) ENSSDUG00000015666 ENSSDUG00000015593 ##22 ENSSDUG00000015514 ENSSDUG00000015369 ENSSDUG00000015318 Yellowtail amberjack MODERN SPECIES 3020 TBC1D9B (ENSSLDG00000017009) rnf130 (ENSSLDG00000017060) F2RL3 (ENSSLDG00000017115) ARAP3 (ENSSLDG00000017137) ENSSLDG00000017200 tgfbi (ENSSLDG00000017226) exosc3 (ENSSLDG00000017276) b4galt1l (ENSSLDG00000017304) rest (ENSSLDG00000017328) noa1 (ENSSLDG00000017344) nipsnap3a (ENSSLDG00000017361) ABCA1 (ENSSLDG00000017383) DGKQ (ENSSLDG00000017466) NFKB1 (ENSSLDG00000017521) ENSSLDG00000017574 ENSSLDG00000017613 ##22 ENSSLDG00000017641 Barramundi perch DUPLICATION Barramundi perch MODERN SPECIES 463 emx3 (ENSLCAG00010006916) ENSLCAG00010006914 LTC4S (ENSLCAG00010006911) MAML1 (ENSLCAG00010006910) canx (ENSLCAG00010006865) mgat4b (ENSLCAG00010006838) DGKQ (ENSLCAG00010006811) NFKB1 (ENSLCAG00010006790) ENSLCAG00010006633 ENSLCAG00010006588 ##22 Barramundi perch MODERN SPECIES 650 ENSLCAG00010012862 ##22 Anabantaria ANCESTRAL SPECIES 15 ENSGT00940000160403 ENSGT00940000155521.a.a ENSGT00940000175795 ENSGT00940000153899.a.a ENSGT00940000159747 ENSGT00940000157712 ENSGT00940000157425.A ENSGT00950000183026.A.a.b ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000156526.a ENSGT00940000168305 ENSGT00940000158625 ENSGT00940000153169.A.b.b.e.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000169511 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 ENSGT00940000159937 ENSGT00940000157174.d ENSGT00940000154658.b.i.a ENSGT00950000183018.b ENSGT00390000001695 ENSGT00940000155341 ENSGT00940000155244.d ENSGT00940000153596.A ENSGT00530000063860.a ENSGT00940000164810 ENSGT00940000158869 Zig-zag eel MODERN SPECIES 1 ENSMAMG00000013358 ENSMAMG00000013373 ENSMAMG00000013380 ENSMAMG00000013395 b4galt7 (ENSMAMG00000013415) ENSMAMG00000028293 ENSMAMG00000013449 LTC4S (ENSMAMG00000028039) ENSMAMG00000013493 canx (ENSMAMG00000013509) mgat4b (ENSMAMG00000013534) ENSMAMG00000013527 ENSMAMG00000013592 ENSMAMG00000013622 ENSMAMG00000013695 ENSMAMG00000013744 ##22 ENSMAMG00000013806 ENSMAMG00000013840 ENSMAMG00000013851 neurog1 (ENSMAMG00000013881) ENSMAMG00000025355 ENSMAMG00000013911 ENSMAMG00000014007 ENSMAMG00000027354 tgfbi (ENSMAMG00000014059) exosc3 (ENSMAMG00000014092) b4galt1l (ENSMAMG00000014115) rest (ENSMAMG00000014139) noa1 (ENSMAMG00000014148) nipsnap3a (ENSMAMG00000014165) ENSMAMG00000014202 Anabantoidei ANCESTRAL SPECIES 11 ENSGT00940000160403 ENSGT00940000155521.a.a ENSGT00940000175795 ENSGT00940000156526.a ENSGT00950000182915.a.a.a ENSGT00950000183201.b.b.b.a ENSGT00940000160738 ENSGT00950000183026.A.a.b ENSGT00940000157425.A ENSGT00940000157712 ENSGT00940000159747 ENSGT00940000153899.a.a ENSGT00940000168305 ENSGT00940000158625 ENSGT00940000153169.A.b.b.e.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000169511 ENSGT00940000153322.B.d.a ENSGT00390000017284.b ENSGT00940000167363 ENSGT00940000159937 ENSGT00940000157174.d ENSGT00940000154658.b.i.a ENSGT00950000183018.b ENSGT00390000001695 ENSGT00940000155341 ENSGT00940000155244.d ENSGT00940000153596.A ENSGT00940000164810 ENSGT00940000158869 ENSGT01050000244840.A.b.a Climbing perch MODERN SPECIES 22 ENSATEG00000029734 ENSATEG00000018020 ENSATEG00000018043 mgat4b (ENSATEG00000018078) canx (ENSATEG00000018130) ENSATEG00000018177 LTC4S (ENSATEG00000018191) ENSATEG00000029494 ENSATEG00000027104 b4galt7 (ENSATEG00000027061) ENSATEG00000018306 ENSATEG00000018323 ENSATEG00000018340 ENSATEG00000018380 ENSATEG00000018427 ENSATEG00000018447 ##22 ENSATEG00000018501 ENSATEG00000018516 ENSATEG00000018534 ENSATEG00000018598 ENSATEG00000018604 ENSATEG00000018620 ENSATEG00000018648 ENSATEG00000018673 ENSATEG00000018789 ENSATEG00000027072 noa1 (ENSATEG00000018828) rest (ENSATEG00000018878) b4galt1l (ENSATEG00000018933) exosc3 (ENSATEG00000018952) ENSATEG00000019047 Siamese fighting fish MODERN SPECIES 1 PCDH1 (ENSBSLG00000018852) ENSBSLG00000018865 mgat4b (ENSBSLG00000018940) ENSBSLG00000002337 canx (ENSBSLG00000002477) MAML1 (ENSBSLG00000002949) LTC4S (ENSBSLG00000002956) ENSBSLG00000002966 emx3 (ENSBSLG00000002975) b4galt7 (ENSBSLG00000003670) tmed9 (ENSBSLG00000003739) tmem216 (ENSBSLG00000003780) DGKQ (ENSBSLG00000003829) NFKB1 (ENSBSLG00000003947) ENSBSLG00000004095 ENSBSLG00000004170 ##22 ENSBSLG00000004753 ENSBSLG00000004827 ENSBSLG00000004900 neurog1 (ENSBSLG00000005027) TBC1D2 (ENSBSLG00000005095) SLC44A1 (ENSBSLG00000005715) nipsnap3a (ENSBSLG00000005938) noa1 (ENSBSLG00000006496) ENSBSLG00000006817 rest (ENSBSLG00000006825) b4galt1l (ENSBSLG00000006844) exosc3 (ENSBSLG00000006929) b4galt1l (ENSBSLG00000006955) ENSBSLG00000007716 ENSBSLG00000007944 Protacanthopterygii ANCESTRAL SPECIES 58 ENSGT00940000156001.d ENSGT00940000153668.B ENSGT00940000163832 ENSGT00940000158505.n.a ENSGT00940000157622.b ENSGT00940000154495.b.a.a.b ENSGT01100000263491.a.b.a.b.a.a ENSGT00940000156045.a ENSGT00940000165124.c ENSGT00940000164963.c.a.d ENSGT00940000164685.b ENSGT00940000178786 ENSGT00940000164374.B.c.b ENSGT01030000234592.A.b.b.b.b ENSGT00940000165332.A.c ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.B ENSGT00530000063506.A ENSGT00530000063555.A.a.a ENSGT00950000183132.C ENSGT00390000001695 ENSGT00940000155341 ENSGT00940000155244.d.f ENSGT00940000153596.A ENSGT01030000234799 ENSGT00950000183018.b ENSGT00940000154658.b.i.a ENSGT00940000157174.d ENSGT00940000159937.h ENSGT00390000013344 ENSGT00940000162158 Northern pike MODERN SPECIES 3 ENSELUG00000024043 rtn4rl2b (ENSELUG00000024026) ENSELUG00000024007 ENSELUG00000026730 slc43a3b (ENSELUG00000023978) ENSELUG00000033803 ENSELUG00000023967 CTNND1 (ENSELUG00000023944) ENSELUG00000023752 ENSELUG00000023713 ENSELUG00000023694 ENSELUG00000023627 ENSELUG00000024647 ENSELUG00000023621 ENSELUG00000023616 ENSELUG00000023593 ##22 CPXM1 (ENSELUG00000023459) ENSELUG00000024850 COX18 (ENSELUG00000023392) igfbp7 (ENSELUG00000023380) polr2b (ENSELUG00000023372) noa1 (ENSELUG00000023295) rest (ENSELUG00000023289) b4galt1l (ENSELUG00000023279) exosc3 (ENSELUG00000023260) ENSELUG00000023239 nipsnap3a (ENSELUG00000023231) ABCA1 (ENSELUG00000023201) SLC44A1 (ENSELUG00000023094) TBC1D2 (ENSELUG00000023015) ELP1 (ENSELUG00000022902) Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 584 ENSGT00940000157061.b.k.b.b ENSGT00530000063371.C.a.d ENSGT00940000164705.e ENSGT00940000156835.l.b.a ENSGT00940000164576.b.a.b.d ENSGT00550000074939.b ENSGT00390000005589.a.b.r ENSGT00950000183067.a.b.a.c.e.a ENSGT00950000182850.a.b.a.b.b.p ENSGT00940000159538.g.b.a ENSGT00940000156641.m.a ENSGT00390000012630.A.a.a ENSGT00390000010107.u ENSGT00940000157281.u ENSGT00950000182859.A.a.b.b.d.c.a.b.a.b ##22 ENSGT00950000182859.A.a.a.a.e ##22 Salmoninae_a ANCESTRAL SPECIES 4 ENSGT00940000157061.b.k.b.b ENSGT00530000063371.C.a.d ENSGT00940000164705.e ENSGT00940000156835.l.b.a ENSGT00940000164576.b.a.b.d ENSGT00550000074939.b ENSGT00390000005589.a.b.r ENSGT00950000183067.a.b.a.c.e.a ENSGT00950000182850.a.b.a.b.b.p ENSGT00940000159538.g.b.a ENSGT00940000156641.m.a ENSGT00390000012630.A.a.a ENSGT00390000010107.u ENSGT00940000157281.u ENSGT00950000182859.A.a.b.b.d.c.a.b.a.b ##22 ENSGT00950000182859.A.a.a.a.e ##22 ENSGT00950000182859.A.a.b.b.c.a.a ##22 ENSGT00940000155650.a.b.c.a ENSGT00940000161042 ENSGT00940000157770.a.a ENSGT00950000182864.a.b.b.a.b.a.b.a.a ##21 ENSGT00390000011206.b ENSGT00990000214210 ENSGT00390000007125.b.b ENSGT00390000014412.k.b ENSGT00390000005989.a.b.a.b.b ##32 ENSGT00940000156198.c.b.c ENSGT00940000154998.a.a.x ENSGT00390000000483.a.a.c ENSGT00940000164716.B.b ENSGT00940000155857.f.b.d Salmo ANCESTRAL SPECIES 44 ENSGT00940000157061.b.k.b.b ENSGT00530000063371.C.a.d ENSGT00940000164705.e ENSGT00940000156835.l.b.a ENSGT00940000164576.b.a.b.d ENSGT00550000074939.b ENSGT00390000005589.a.b.r ENSGT00950000183067.a.b.a.c.e.a ENSGT00950000182850.a.b.a.b.b.p ENSGT00940000159538.g.b.a ENSGT00940000156641.m.a ENSGT00390000012630.A.a.a ENSGT00390000010107.u ENSGT00940000157281.u ENSGT00950000182859.A.a.b.b.d.c.a.b.a.b ##22 ENSGT00950000182859.A.a.a.a.e ##22 ENSGT00950000182859.A.a.b.b.c.a.a ##22 ENSGT00940000155650.a.b.c.a ENSGT00940000161042 ENSGT00940000157770.a.a ENSGT00950000182864.a.b.b.a.b.a.b.a.a ##21 ENSGT00390000011206.b ENSGT00990000214210 ENSGT00390000007125.b.b ENSGT00390000014412.k.b ENSGT00390000005989.a.b.a.b.b ##32 ENSGT00940000156198.c.b.c ENSGT00940000154998.a.a.x ENSGT00390000000483.a.a.c ENSGT00940000164716.B.b ENSGT00940000155857.f.b.d River trout MODERN SPECIES 6 fam53c (ENSSTUG00000011224) slbp2 (ENSSTUG00000011232) ENSSTUG00000011244 foxi3a (ENSSTUG00000011289) nhp2 (ENSSTUG00000011301) grpel2 (ENSSTUG00000011320) afap1l1b (ENSSTUG00000011335) ablim3 (ENSSTUG00000011402) adrb2b (ENSSTUG00000011494) ubtd2 (ENSSTUG00000011499) ENSSTUG00000011515 IL12B (ENSSTUG00000011518) UBLCP1 (ENSSTUG00000011536) RNF145 (ENSSTUG00000011631) EBF1 (ENSSTUG00000011739) ##22 ENSSTUG00000011744 ##22 CLINT1 (ENSSTUG00000011752) ENSSTUG00000011800 TCERG1 (ENSSTUG00000011818) ENSSTUG00000012111 ##21 PCYOX1L (ENSSTUG00000012245) ENSSTUG00000012264 CREBRF (ENSSTUG00000012271) BNIP1 (ENSSTUG00000012299) STC2 (ENSSTUG00000012322) ##32 bod1 (ENSSTUG00000012340) CPEB4 (ENSSTUG00000012363) nsg2 (ENSSTUG00000012611) msx2b (ENSSTUG00000012621) drd1b (ENSSTUG00000012628) RAD50 (ENSSTUG00000012660) Oncorhynchus ANCESTRAL SPECIES 41 ENSGT00940000164705.f ENSGT00390000010712 ENSGT00940000156835.l.b.b ENSGT00940000164576.b.a.b.c ENSGT00550000074939.a ENSGT00390000005589.a.b.q ENSGT00950000183067.a.b.a.c.e.b ENSGT00950000182850.a.b.a.b.b.o ENSGT00940000159538.g.b.b ENSGT00940000156641.m.b ENSGT00390000012630.A.a.b ENSGT00390000010107.v ENSGT00940000157281.v ENSGT00950000182859.A.a.b.b.c.a.b ##22 ENSGT00950000182859.A.a.b.b.c.b ##22 ENSGT00950000182859.A.a.a.a.e ##22 ENSGT00940000155650.a.b.c.b ENSGT00940000161042.c ENSGT00940000157770.a.b ENSGT00950000182864.a.b.b.a.b.a.b.a.b ##21 ENSGT00940000156866.b ENSGT00390000007125.b.a ENSGT00390000014412.k.a ENSGT00390000005989.a.b.a.b.a ##32 ENSGT00940000156198.c.b.d ENSGT00940000154998.a.a.w ENSGT00390000000483.a.a.d ENSGT00940000164716.B.a ENSGT00940000155857.f.b.c ENSGT00940000160880.g ENSGT00510000046929.b.c Oncorhynchus_a ANCESTRAL SPECIES 43 ENSGT00390000010712 ENSGT00940000156835.l.b.b ENSGT00940000164576.b.a.b.c ENSGT00550000074939.a ENSGT00390000005589.a.b.q ENSGT00950000183067.a.b.a.c.e.b ENSGT00950000182850.a.b.a.b.a.b.g.b.b ENSGT00950000182850.a.b.a.b.b.o ENSGT00940000159538.g.b.b ENSGT00940000156641.m.b ENSGT00390000012630.A.a.b ENSGT00390000010107.v ENSGT00940000157281.v ENSGT00950000182859.A.a.b.b.d.c.a.b.a.a ##22 ENSGT00950000182859.A.a.b.b.c.b ##22 ENSGT00950000182859.A.a.a.a.e ##22 ENSGT00940000155650.a.b.c.b ENSGT00940000161042.c ENSGT00940000157770.a.b ENSGT00950000182864.a.b.b.a.b.a.b.a.b ##21 ENSGT00940000156866.b ENSGT00390000007125.b.a ENSGT00390000014412.k.a ENSGT00390000005989.a.b.a.b.a ##32 ENSGT00940000156198.c.b.d ENSGT00940000154998.a.a.w ENSGT00390000000483.a.a.d ENSGT00940000164716.B.a ENSGT00940000155857.f.b.c ENSGT00940000160880.g ENSGT00510000046929.b.c Coho salmon MODERN SPECIES 20 foxi3a (ENSOKIG00005037555) nhp2 (ENSOKIG00005037534) grpel2 (ENSOKIG00005037510) afap1l1b (ENSOKIG00005037475) ENSOKIG00005037461 ABLIM3 (ENSOKIG00005037308) adrb2b (ENSOKIG00005037279) ubtd2 (ENSOKIG00005037269) ENSOKIG00005037259 ENSOKIG00005037227 UBLCP1 (ENSOKIG00005037194) RNF145 (ENSOKIG00005037114) ENSOKIG00005037103 EBF1 (ENSOKIG00005037089) ##22 EBF1 (ENSOKIG00005037083) ##22 ENSOKIG00005037071 ##22 CLINT1 (ENSOKIG00005037005) TCERG1 (ENSOKIG00005036688) DLX6 (ENSOKIG00005036642) ENSOKIG00005036438 ##21 ATP6V0E1 (ENSOKIG00005036389) CREBRF (ENSOKIG00005036368) BNIP1 (ENSOKIG00005036339) STC2 (ENSOKIG00005036318) ##32 bod1 (ENSOKIG00005036294) CPEB4 (ENSOKIG00005035997) nsg2 (ENSOKIG00005035972) msx2b (ENSOKIG00005035967) drd1b (ENSOKIG00005035960) POU4F3 (ENSOKIG00005035942) RBM27 (ENSOKIG00005035894) Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 34 ENSGT00940000163832 ENSGT00940000158505.n.a.c ENSGT00940000164807.G.a.b.e.a.a.b.b ENSGT00940000157622.b.h ENSGT00940000154495.b.a.a.b.b ENSGT01100000263491.a.b.a.b.a.a.b.b ENSGT00940000156045.a.d ENSGT00940000165124.c.g.a ENSGT00940000164963.c.a.d.a ENSGT00940000164685.b.h ENSGT00940000178786 ENSGT00940000164374.B.c.b.d.a.b ENSGT00940000164374.B.c.b.d.b.b ENSGT01030000234592.A.b.b.b.b.d ENSGT00940000165332.A.c.a ENSGT00950000182859.A.a.a.a.f.a ##22 ENSGT00940000156141.B ENSGT00530000063506.A ENSGT00530000063555.A.a.a.i ENSGT00950000183132.C.bb ENSGT00390000001695.f ENSGT00940000155341.d ENSGT00940000155244.d.f.b ENSGT01030000234799.c ENSGT00950000183018.b.g ENSGT00940000154658.b.i.a.c ENSGT00940000157174.d.i ENSGT00940000159937.h.b ENSGT00390000013344.c ENSGT00940000155007.n.a.a ENSGT00950000182938.b.b.b.a.b.b.f Huchen DUPLICATION Huchen MODERN SPECIES 189 zdhhc5b (ENSHHUG00000029160) clp1 (ENSHHUG00000029174) ENSHHUG00000029175 rtn4rl2b (ENSHHUG00000029183) ENSHHUG00000029187 ENSHHUG00000029192 ENSHHUG00000029193 CTNND1 (ENSHHUG00000029195) ENSHHUG00000029354 ENSHHUG00000029358 ENSHHUG00000029391 ENSHHUG00000029395 ENSHHUG00000029399 ENSHHUG00000029402 ENSHHUG00000029407 ENSHHUG00000029412 ##22 ENSHHUG00000029416 ##22 CPXM1 (ENSHHUG00000029425) COX18 (ENSHHUG00000029426) igfbp7 (ENSHHUG00000029427) POLR2B (ENSHHUG00000029432) noa1 (ENSHHUG00000029536) rest (ENSHHUG00000029544) b4galt1l (ENSHHUG00000029547) ENSHHUG00000029550 nipsnap3a (ENSHHUG00000029554) ABCA1 (ENSHHUG00000029601) SLC44A1 (ENSHHUG00000030940) TBC1D2 (ENSHHUG00000031002) ELP1 (ENSHHUG00000031028) ENSHHUG00000031463 Huchen MODERN SPECIES 189 clp1 (ENSHHUG00000029174) ENSHHUG00000029175 rtn4rl2b (ENSHHUG00000029183) ENSHHUG00000029187 ENSHHUG00000029192 ENSHHUG00000029193 CTNND1 (ENSHHUG00000029195) ENSHHUG00000029354 ENSHHUG00000029358 ENSHHUG00000029391 ENSHHUG00000029395 ENSHHUG00000029399 ENSHHUG00000029402 ENSHHUG00000029407 ENSHHUG00000029412 ##22 ENSHHUG00000029416 ##22 CPXM1 (ENSHHUG00000029425) COX18 (ENSHHUG00000029426) igfbp7 (ENSHHUG00000029427) POLR2B (ENSHHUG00000029432) noa1 (ENSHHUG00000029536) rest (ENSHHUG00000029544) b4galt1l (ENSHHUG00000029547) ENSHHUG00000029550 nipsnap3a (ENSHHUG00000029554) ABCA1 (ENSHHUG00000029601) SLC44A1 (ENSHHUG00000030940) TBC1D2 (ENSHHUG00000031002) ELP1 (ENSHHUG00000031028) ENSHHUG00000031463 ENSHHUG00000031478 Salmoninae_a ANCESTRAL SPECIES 40 ENSGT00940000163832 ENSGT00940000158505.n.a.c ENSGT00940000164807.G.a.b.e.a.a.b.b ENSGT00940000157622.b.h ENSGT00940000154495.b.a.a.b.b ENSGT01100000263491.a.b.a.b.a.a.b.b ENSGT00940000156045.a.d ENSGT00940000165124.c.g.a ENSGT00940000164963.c.a.d.a ENSGT00940000164685.b.h ENSGT00940000164374.B.c.b.d.b.b ENSGT00940000178786 ENSGT00940000164374.B.c.b.d.a.b ENSGT01030000234592.A.b.b.b.b.d ENSGT00940000165332.A.c.a ENSGT00950000182859.A.a.a.a.f.a ##22 ENSGT00940000156141.B ENSGT00530000063506.A ENSGT00530000063555.A.a.a.i ENSGT00950000183132.C.bb ENSGT00390000001695.f ENSGT00940000155341.d ENSGT00940000155244.d.f.b ENSGT01030000234799.c ENSGT00950000183018.b.g ENSGT00940000154658.b.i.a.c ENSGT00940000157174.d.i ENSGT00940000159937.h.b ENSGT00390000013344.c ENSGT00940000155007.n.a.a ENSGT00950000182938.b.b.b.a.b.b.f Oncorhynchus ANCESTRAL SPECIES 39 ENSGT00940000156001.d.c ENSGT00940000153668.B.g ENSGT00940000163832 ENSGT00940000158505.n.a.c ENSGT01100000263491.a.b.a.b.a.a.b.b ENSGT00940000157622.b.h ENSGT00940000154495.b.a.a.b.b ENSGT00940000156045.a.d ENSGT00940000165124.c.g.a ENSGT00940000164963.c.a.d.a ENSGT00940000164685.b.h ENSGT00940000178786 ENSGT00940000164374.B.c.b.d.a.b ENSGT00940000164374.B.c.b.d.b.b ENSGT00940000165332.A.c.a ENSGT00950000182859.A.a.a.a.f.a ##22 ENSGT00940000156141.B ENSGT00530000063506.A ENSGT00530000063555.A.a.a.i ENSGT00950000183132.C.bb ENSGT00390000001695.f ENSGT00940000155341.d ENSGT00940000155244.d.f.b ENSGT01030000234799.c ENSGT00950000183018.b.g ENSGT00940000154658.b.i.a.c ENSGT00940000157174.d.i ENSGT00940000159937.h.b ENSGT00390000013344.c ENSGT00940000155007.n.a.a ENSGT00950000182938.b.b.b.a.b.b.f Rainbow trout MODERN SPECIES 23 ENSOMYG00000022202 ENSOMYG00000022220 ENSOMYG00000022231 rtn4rl2b (ENSOMYG00000053672) ENSOMYG00000022242 ENSOMYG00000022274 ENSOMYG00000022310 ENSOMYG00000022322 ENSOMYG00000022357 ENSOMYG00000069378 ENSOMYG00000037629 ENSOMYG00000075536 ENSOMYG00000037666 ENSOMYG00000022430 ENSOMYG00000022447 ENSOMYG00000022509 ##22 ENSOMYG00000056323 ENSOMYG00000051104 ENSOMYG00000022653 ENSOMYG00000022719 igfbp7 (ENSOMYG00000022732) POLR2B (ENSOMYG00000022919) noa1 (ENSOMYG00000023221) rest (ENSOMYG00000058641) b4galt1l (ENSOMYG00000076799) ENSOMYG00000023275 nipsnap3a (ENSOMYG00000023294) ENSOMYG00000026618 SLC44A1 (ENSOMYG00000041543) ENSOMYG00000041666 ENSOMYG00000041838 Oncorhynchus_a ANCESTRAL SPECIES 40 ENSGT00940000156001.d.c ENSGT00940000153668.B.g ENSGT00940000163832 ENSGT00940000158505.n.a.c ENSGT00940000157622.b.h ENSGT00940000154495.b.a.a.b.b ENSGT01100000263491.a.b.a.b.a.a.b.b ENSGT00940000156045.a.d ENSGT00940000165124.c.g.a ENSGT00940000164963.c.a.d.a ENSGT00940000164685.b.h ENSGT00940000164374.B.c.b.d.b.b ENSGT00940000178786 ENSGT00940000164374.B.c.b.c ENSGT00940000165332.A.c.a ENSGT00950000182859.A.a.a.a.f.a ##22 ENSGT00940000156141.B ENSGT00530000063506.A ENSGT00530000063555.A.a.a.i ENSGT00950000183132.C.bb ENSGT00390000001695.f ENSGT00940000155341.d ENSGT00940000155244.d.f.b ENSGT01030000234799.c ENSGT00950000183018.b.g ENSGT00940000154658.b.i.a.c ENSGT00940000157174.d.i ENSGT00940000159937.h.b ENSGT00390000013344.c ENSGT00940000155007.n.a.a ENSGT00950000182938.b.b.b.a.b.b.f Chinook salmon MODERN SPECIES 32 tmx2a (ENSOTSG00005021833) zdhhc5b (ENSOTSG00005021834) clp1 (ENSOTSG00005021835) ENSOTSG00005021836 ENSOTSG00005021837 ENSOTSG00005021838 SLC43A3 (ENSOTSG00005021854) ENSOTSG00005022209 CTNND1 (ENSOTSG00005022211) ENSOTSG00005022222 ENSOTSG00005022230 ENSOTSG00005022233 ENSOTSG00005022238 ENSOTSG00005022239 ENSOTSG00005022240 ENSOTSG00005022244 ##22 CPXM1 (ENSOTSG00005022711) COX18 (ENSOTSG00005022746) igfbp7 (ENSOTSG00005022748) POLR2B (ENSOTSG00005022750) noa1 (ENSOTSG00005022766) rest (ENSOTSG00005022767) b4galt1l (ENSOTSG00005016595) ENSOTSG00005016598 nipsnap3a (ENSOTSG00005016599) ABCA1 (ENSOTSG00005016622) SLC44A1 (ENSOTSG00005033287) TBC1D2 (ENSOTSG00005033426) ELP1 (ENSOTSG00005033435) ENSOTSG00005038490 CPLX1 (ENSOTSG00005038491) Coho salmon MODERN SPECIES 6 med19a (ENSOKIG00005011196) tmx2a (ENSOKIG00005011240) zdhhc5b (ENSOKIG00005011267) clp1 (ENSOKIG00005011285) ENSOKIG00005011303 rtn4rl2b (ENSOKIG00005011324) ENSOKIG00005011330 SLC43A3 (ENSOKIG00005011343) smtnl1 (ENSOKIG00005011352) CTNND1 (ENSOKIG00005011392) ENSOKIG00005011502 ENSOKIG00005011525 ENSOKIG00005011561 ENSOKIG00005011577 ENSOKIG00005011622 ENSOKIG00005011712 ##22 CPXM1 (ENSOKIG00005012175) COX18 (ENSOKIG00005012328) igfbp7 (ENSOKIG00005012342) POLR2B (ENSOKIG00005012387) noa1 (ENSOKIG00005012664) rest (ENSOKIG00005012673) b4galt1l (ENSOKIG00005012681) ENSOKIG00005012691 nipsnap3a (ENSOKIG00005012715) ABCA1 (ENSOKIG00005013160) SLC44A1 (ENSOKIG00005022012) TBC1D2 (ENSOKIG00005022157) ELP1 (ENSOKIG00005022302) ENSOKIG00005025224 CPLX1 (ENSOKIG00005025293) Salmo ANCESTRAL SPECIES 43 ENSGT00940000156001.d.c ENSGT00940000153668.B.g ENSGT00940000163832 ENSGT00940000158505.n.a.c ENSGT00940000164807.G.a.b.e.a.a.b.b ENSGT00940000157622.b.h ENSGT00940000154495.b.a.a.b.b ENSGT01100000263491.a.b.a.b.a.a.b.b ENSGT00940000156045.a.d ENSGT00940000165124.c.g.a ENSGT00940000164963.c.a.d.a ENSGT00940000164685.b.h ENSGT00940000164374.B.c.b.d.a.b ENSGT01030000234592.A.b.b.b.b.d ENSGT00940000165332.A.c.a ENSGT00950000182859.A.a.a.a.f.a ##22 ENSGT00940000156141.B ENSGT00530000063506.A.a ENSGT00530000063555.A.a.a.i ENSGT00950000183132.C.bb ENSGT00390000001695.f ENSGT00940000155341.d ENSGT00940000155244.d.f.b ENSGT01030000234799.c ENSGT00950000183018.b.g ENSGT00940000154658.b.i.a.c ENSGT00940000157174.d.i ENSGT00940000159937.h.b ENSGT00390000013344.c ENSGT00940000155007.n.a.a ENSGT00950000182938.b.b.b.a.b.b.f River trout MODERN SPECIES 4 zdhhc5b (ENSSTUG00000030055) clp1 (ENSSTUG00000030023) ENSSTUG00000030014 rtn4rl2b (ENSSTUG00000030004) ENSSTUG00000029997 SLC43A3 (ENSSTUG00000029987) smtnl1 (ENSSTUG00000029975) ENSSTUG00000029964 CTNND1 (ENSSTUG00000029841) ENSSTUG00000029825 ENSSTUG00000029811 ENSSTUG00000029771 ENSSTUG00000029764 ENSSTUG00000029751 ENSSTUG00000029736 ENSSTUG00000029029 ##22 CPXM1 (ENSSTUG00000028640) COX18 (ENSSTUG00000028604) igfbp7 (ENSSTUG00000028591) POLR2B (ENSSTUG00000028472) noa1 (ENSSTUG00000028463) rest (ENSSTUG00000028453) b4galt1l (ENSSTUG00000028445) ENSSTUG00000028438 nipsnap3a (ENSSTUG00000028426) ABCA1 (ENSSTUG00000017159) SLC44A1 (ENSSTUG00000016866) TBC1D2 (ENSSTUG00000016854) ELP1 (ENSSTUG00000016174) ENSSTUG00000016145 ENSSTUG00000016122 Atlantic salmon MODERN SPECIES 28 ENSSSAG00000074348 tmx2a (ENSSSAG00000121791) ENSSSAG00000074337 ENSSSAG00000074329 ENSSSAG00000074328 rtn4rl2b (ENSSSAG00000092745) ENSSSAG00000114025 slc43a3b (ENSSSAG00000074322) smtnl1 (ENSSSAG00000082847) ENSSSAG00000087239 ENSSSAG00000074144 ENSSSAG00000074126 ENSSSAG00000074120 ENSSSAG00000109426 ENSSSAG00000073919 ENSSSAG00000072129 ##22 ENSSSAG00000072026 ENSSSAG00000072021 igfbp7 (ENSSSAG00000045171) rpb2 (ENSSSAG00000071973) noa1 (ENSSSAG00000071956) rest (ENSSSAG00000099469) ENSSSAG00000116895 nipsnap3a (ENSSSAG00000071926) ENSSSAG00000053066 SLC44A1 (ENSSSAG00000050722) ENSSSAG00000050660 ENSSSAG00000048788 SMU1 (ENSSSAG00000048740) CPLX1 (ENSSSAG00000087659) ENSSSAG00000048732 Salmoninae ANCESTRAL SPECIES 168 ENSGT00940000156001.d.d ENSGT00940000153668.B.h ENSGT00940000175691 ENSGT00940000158505.n.a.d ENSGT00940000157622.b.g ENSGT00940000154495.b.a.a.b.a ENSGT01100000263491.a.b.a.b.a.a.b.a ENSGT00940000156045.a.c ENSGT00940000165124.c.g.b ENSGT00940000164963.c.a.d.b ENSGT00940000164685.b.g ENSGT00940000164374.B.c.b.d.a.a ENSGT00940000164374.B.c.b.d.b.a ENSGT01030000234592.A.b.b.b.b.c ENSGT00940000165332.A.c.b ENSGT00950000182859.A.a.a.a.f.b ##22 ENSGT00940000173239 ENSGT00530000063555.A.a.a.j ENSGT00950000183132.C.cb ENSGT00390000001695.e ENSGT00940000155341.c ENSGT00940000155244.d.f.a ENSGT00940000153596.A ENSGT01030000234799.d ENSGT00950000183018.b.h ENSGT00940000154658.b.i.a.d ENSGT00940000157174.d.j ENSGT00940000159937.h.a ENSGT00390000013344.d ENSGT00940000162158 ENSGT00940000155007.n.a.b Huchen MODERN SPECIES 191 ENSHHUG00000036849 ENSHHUG00000036857 ENSHHUG00000036845 ENSHHUG00000036837 ENSHHUG00000036833 ENSHHUG00000036831 ENSHHUG00000036829 ENSHHUG00000036827 ENSHHUG00000036797 ENSHHUG00000036764 ##22 ENSHHUG00000036756 ENSHHUG00000036751 ENSHHUG00000036746 igfbp7 (ENSHHUG00000036744) POLR2B (ENSHHUG00000036725) ENSHHUG00000036719 rest (ENSHHUG00000036715) b4galt1l (ENSHHUG00000036708) exosc3 (ENSHHUG00000036701) ENSHHUG00000036696 nipsnap3a (ENSHHUG00000036676) ABCA1 (ENSHHUG00000034358) SLC44A1 (ENSHHUG00000034302) TBC1D2 (ENSHHUG00000034292) ELP1 (ENSHHUG00000034171) Salmoninae_a ANCESTRAL SPECIES 18 ENSGT00940000153668.B.h ENSGT00940000175691.d ENSGT00940000175691.c ENSGT00940000158505.n.a.d ENSGT00940000164807.G.a.b.e.a.a.b.a ENSGT00940000157622.b.g ENSGT00940000154495.b.a.a.b.a ENSGT01100000263491.a.b.a.b.a.a.b.a ENSGT00940000156045.a.c ENSGT00940000165124.c.g.b ENSGT00940000164963.c.a.d.b ENSGT00940000164685.b.g ENSGT00940000164374.B.c.b.d.a.a ENSGT01030000234592.A.b.b.b.b.c ENSGT00940000165332.A.c.b ENSGT00950000182859.A.a.a.a.f.b ##22 ENSGT00940000165798.c.b.a.a ENSGT00940000173239 ENSGT00530000063555.A.a.a.j ENSGT00950000183132.C.cb ENSGT00390000001695.e ENSGT00940000155341.c ENSGT00940000155244.d.f.a ENSGT00940000153596.A ENSGT01030000234799.d ENSGT00950000183018.b.h ENSGT00940000154658.b.i.a.d ENSGT00940000157174.d.j ENSGT00940000159937.h.a ENSGT00390000013344.d ENSGT00940000162158 Oncorhynchus ANCESTRAL SPECIES 4 ENSGT00940000156001.d.d ENSGT00940000153668.B.h ENSGT00940000175691.d ENSGT00940000158505.n.a.d ENSGT00940000164807.G.a.b.e.a.a.b.a ENSGT00940000157622.b.g ENSGT00940000154495.b.a.a.b.a ENSGT01100000263491.a.b.a.b.a.a.b.a ENSGT00940000156045.a.c ENSGT00940000165124.c.g.b ENSGT00940000164963.c.a.d.b ENSGT00940000164685.b.g ENSGT00940000164374.B.c.b.d.a.a ENSGT01030000234592.A.b.b.b.b.c ENSGT00940000165332.A.c.b ENSGT00950000182859.A.a.a.a.f.b ##22 ENSGT00940000165798.c.b.a.a ENSGT00940000173239 ENSGT00530000063555.A.a.a.j ENSGT00950000183132.C.cb ENSGT00390000001695.e ENSGT00940000155341.c ENSGT00940000155244.d.f.a ENSGT00940000153596.A ENSGT01030000234799.d ENSGT00950000183018.b.h ENSGT00940000154658.b.i.a.d ENSGT00940000157174.d.j ENSGT00940000159937.h.a ENSGT00390000013344.d ENSGT00940000162158 Oncorhynchus_a ANCESTRAL SPECIES 2 ENSGT00940000162656 ENSGT00390000003751.b.a.b ENSGT00940000156001.d.d ENSGT00940000153668.B.h ENSGT00940000175691.d ENSGT00940000158505.n.a.d ENSGT00940000157622.b.g ENSGT00940000154495.b.a.a.b.a ENSGT00940000156045.a.c ENSGT00940000165124.c.g.b ENSGT00940000164963.c.a.d.b ENSGT00940000164685.b.g ENSGT00940000164374.B.c.b.d.a.a ENSGT01030000234592.A.b.b.b.b.c ENSGT00940000165332.A.c.b ENSGT00950000182859.A.a.a.a.f.b ##22 ENSGT00940000165798.c.b.a.a ENSGT00940000173239 ENSGT00530000063555.A.a.a.j ENSGT00950000183132.C.cb ENSGT00940000155341.c ENSGT00940000155244.d.f.a ENSGT00940000153596.A ENSGT01030000234799.d ENSGT00950000183018.b.h ENSGT00940000154658.b.i.a.d ENSGT00940000157174.d.j ENSGT00940000159937.h.a ENSGT00390000013344.d ENSGT00940000162158 ENSGT00940000155007.n.a.b Coho salmon MODERN SPECIES 10 ZDHHC5 (ENSOKIG00005024738) CLP1 (ENSOKIG00005024793) ENSOKIG00005024808 rtn4rl2b (ENSOKIG00005024813) ENSOKIG00005024820 SLC43A3 (ENSOKIG00005024863) smtnl1 (ENSOKIG00005024902) CTNND1 (ENSOKIG00005025059) ENSOKIG00005027323 ENSOKIG00005027350 ENSOKIG00005027376 ENSOKIG00005027468 ENSOKIG00005027490 ENSOKIG00005027499 ENSOKIG00005027506 ENSOKIG00005027556 ##22 ENSOKIG00005027944 ENSOKIG00005028023 igfbp7 (ENSOKIG00005028041) POLR2B (ENSOKIG00005028080) rest (ENSOKIG00005028207) b4galt1l (ENSOKIG00005028217) exosc3 (ENSOKIG00005028223) nipsnap3a (ENSOKIG00005028274) ABCA1 (ENSOKIG00005028349) SLC44A1 (ENSOKIG00005029329) TBC1D2 (ENSOKIG00005029414) ELP1 (ENSOKIG00005029583) ACTL7A (ENSOKIG00005031641) SMU1 (ENSOKIG00005031652) ENSOKIG00005031690 Chinook salmon MODERN SPECIES 13 tmx2a (ENSOTSG00005011971) ZDHHC5 (ENSOTSG00005011980) clp1 (ENSOTSG00005011983) ENSOTSG00005011984 rtn4rl2b (ENSOTSG00005011985) ENSOTSG00005011989 slc43a3b (ENSOTSG00005011992) smtnl1 (ENSOTSG00005011996) CTNND1 (ENSOTSG00005012015) ENSOTSG00005012185 ENSOTSG00005012187 ENSOTSG00005012189 ENSOTSG00005012190 ENSOTSG00005012191 ENSOTSG00005012192 ENSOTSG00005012197 ##22 ENSOTSG00005032014 igfbp7 (ENSOTSG00005032047) POLR2B (ENSOTSG00005032048) rest (ENSOTSG00005032228) b4galt1l (ENSOTSG00005032229) exosc3 (ENSOTSG00005032230) ENSOTSG00005032231 nipsnap3a (ENSOTSG00005032232) ABCA1 (ENSOTSG00005032273) ENSOTSG00005042254 SLC44A1 (ENSOTSG00005042255) TBC1D2 (ENSOTSG00005042277) ELP1 (ENSOTSG00005042287) ACTL7A (ENSOTSG00005042863) SMU1 (ENSOTSG00005042865) Rainbow trout MODERN SPECIES 5 ENSOMYG00000037464 ENSOMYG00000037473 ENSOMYG00000037481 rtn4rl2b (ENSOMYG00000037487) ENSOMYG00000037495 ENSOMYG00000037500 ENSOMYG00000058740 ENSOMYG00000037505 ENSOMYG00000037550 ENSOMYG00000037592 ENSOMYG00000037607 ENSOMYG00000066244 ENSOMYG00000065703 ENSOMYG00000056312 ENSOMYG00000037676 ENSOMYG00000037804 ##22 ENSOMYG00000067230 ENSOMYG00000076444 POLR2B (ENSOMYG00000037972) ENSOMYG00000066901 igfbp7 (ENSOMYG00000038012) noa1 (ENSOMYG00000074670) rest (ENSOMYG00000038024) b4galt1l (ENSOMYG00000038034) exosc3 (ENSOMYG00000038044) ENSOMYG00000038050 nipsnap3a (ENSOMYG00000038055) ENSOMYG00000039123 SLC44A1 (ENSOMYG00000043363) ENSOMYG00000043430 ENSOMYG00000043556 Salmo ANCESTRAL SPECIES 24 ENSGT00940000156001.d.d ENSGT00940000153668.B.h ENSGT00940000175691.c ENSGT00940000158505.n.a.d ENSGT00940000164807.G.a.b.e.a.a.b.a ENSGT00940000157622.b.g ENSGT00940000154495.b.a.a.b.a ENSGT01100000263491.a.b.a.b.a.a.b.a ENSGT00940000156045.a.c ENSGT00940000165124.c.g.b ENSGT00940000164963.c.a.d.b ENSGT00940000164685.b.g ENSGT00940000164374.B.c.b.d.a.a ENSGT01030000234592.A.b.b.b.b.c ENSGT00940000165332.A.c.b ENSGT00950000182859.A.a.a.a.f.b ##22 ENSGT00940000165798.c.b.a.a ENSGT00530000063506.A.b ENSGT00530000063555.A.a.a.j ENSGT00950000183132.C.cb ENSGT00940000155341.c ENSGT00940000155244.d.f.a ENSGT00940000153596.A ENSGT01030000234799.d ENSGT00950000183018.b.h ENSGT00940000154658.b.i.a.d ENSGT00940000157174.d.j ENSGT00940000159937.h.a ENSGT00390000013344.d ENSGT00940000162158 ENSGT00940000155007.n.a.b River trout MODERN SPECIES 22 ENSSTUG00000016426 clp1 (ENSSTUG00000016411) ENSSTUG00000016390 rtn4rl2b (ENSSTUG00000016386) ENSSTUG00000016382 SLC43A3 (ENSSTUG00000016352) smtnl1 (ENSSTUG00000016344) CTNND1 (ENSSTUG00000015997) ENSSTUG00000015978 ENSSTUG00000015953 ENSSTUG00000015930 ENSSTUG00000015923 ENSSTUG00000015918 ENSSTUG00000015914 ENSSTUG00000015909 ENSSTUG00000015066 ##22 ENSSTUG00000014855 COX18 (ENSSTUG00000014807) igfbp7 (ENSSTUG00000014797) POLR2B (ENSSTUG00000014626) rest (ENSSTUG00000014611) b4galt1l (ENSSTUG00000014605) exosc3 (ENSSTUG00000014593) ENSSTUG00000014582 nipsnap3a (ENSSTUG00000014572) ABCA1 (ENSSTUG00000005428) SLC44A1 (ENSSTUG00000004990) TBC1D2 (ENSSTUG00000004924) ELP1 (ENSSTUG00000002917) ACTL7A (ENSSTUG00000002814) ENSSTUG00000002805 Atlantic salmon MODERN SPECIES 24 ENSSSAG00000055209 ENSSSAG00000055201 ENSSSAG00000055193 rtn4rl2b (ENSSSAG00000055190) ENSSSAG00000055165 smtnl1 (ENSSSAG00000102088) ENSSSAG00000040560 ENSSSAG00000055005 ENSSSAG00000054982 ENSSSAG00000083129 ENSSSAG00000054954 ENSSSAG00000054939 ENSSSAG00000054934 ENSSSAG00000054926 ENSSSAG00000054922 ENSSSAG00000045462 ##22 ENSSSAG00000045264 ENSSSAG00000094371 ENSSSAG00000084281 ENSSSAG00000045199 igfbp7 (ENSSSAG00000103603) POLR2B (ENSSSAG00000044638) rest (ENSSSAG00000044606) b4galt1l (ENSSSAG00000108736) exosc3 (ENSSSAG00000044542) nipsnap3a (ENSSSAG00000044517) ENSSSAG00000018923 SLC44A1 (ENSSSAG00000015855) ENSSSAG00000015765 ENSSSAG00000007938 ENSSSAG00000007820 Otomorpha ANCESTRAL SPECIES 95 ENSGT00940000165724 ENSGT00940000161036.A.f ENSGT00940000170259 ENSGT00390000004945 ENSGT00390000012666 ENSGT00940000156141.A ENSGT00940000165044 ENSGT00940000153169.A.b.b.e.a ENSGT00390000001670 ENSGT00940000158926 ENSGT00950000182932.A.b.a.b ENSGT00940000155378.c.a ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000153169.A.b.b.e.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.B ENSGT00530000063506.A ENSGT00530000063555.A.a.a ENSGT00950000183132.C ENSGT00390000001695 ENSGT00940000155341 ENSGT00940000155244.d ENSGT00940000153596.A ENSGT01100000265280 ENSGT01030000234799 ENSGT00950000183018.b ENSGT00940000154658.b.i.a ENSGT00940000157174.d ENSGT00940000177365 ENSGT00940000159937 Clupeiformes ANCESTRAL SPECIES 23 ENSGT00940000159651.c ENSGT00940000161036.A.f ENSGT00940000170259 ENSGT00940000153168.C.a.b ENSGT00390000004945 ENSGT00390000012666 ENSGT00940000156141.A ENSGT00940000165044 ENSGT00390000001670 ENSGT00940000158926 ENSGT00950000182932.A.b.a.b ENSGT00940000155378.c.a ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000153169.A.b.b.e.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.B ENSGT00390000003477 ENSGT00390000012901 ENSGT00940000159350 ENSGT00940000157037.a.c.a ENSGT00940000159192 ENSGT00390000009416 ENSGT00940000160595.b ENSGT00940000156835.l.a.b ENSGT00940000160449 ENSGT00940000164241 ENSGT00940000161843 ENSGT00940000162201.p ENSGT00390000010950 ENSGT00940000164838.f Denticle herring MODERN SPECIES 9 BTK (ENSDCDG00000019556) RPL36A (ENSDCDG00000019565) gla (ENSDCDG00000019568) glra4a (ENSDCDG00000019588) DIAPH2 (ENSDCDG00000019845) pcdh19 (ENSDCDG00000021116) ENSDCDG00000021118 ENSDCDG00000021120 tnmd (ENSDCDG00000021121) elf1 (ENSDCDG00000021122) gsr (ENSDCDG00000021139) ENSDCDG00000021218 DGKQ (ENSDCDG00000021230) NFKB1 (ENSDCDG00000021339) UBE2D3 (ENSDCDG00000023284) ENSDCDG00000023411 ##22 CPXM1 (ENSDCDG00000023602) lyar (ENSDCDG00000023927) TMEM128 (ENSDCDG00000023930) OTOP1 (ENSDCDG00000023933) DRD5 (ENSDCDG00000023936) SLC2A9 (ENSDCDG00000023972) WDR1 (ENSDCDG00000025046) ENSDCDG00000025050 ENSDCDG00000025051 HS3ST1 (ENSDCDG00000025054) ENSDCDG00000025061 nkx3-2 (ENSDCDG00000025066) ENSDCDG00000025068 ENSDCDG00000025075 tlr1 (ENSDCDG00000025094) Atlantic herring MODERN SPECIES 12 slc25a43 (ENSCHAG00000019183) BTK (ENSCHAG00000019204) rpl36a (ENSCHAG00000019377) gla (ENSCHAG00000019452) glra4a (ENSCHAG00000000774) DIAPH2 (ENSCHAG00000001390) ENSCHAG00000003668 pcdh19 (ENSCHAG00000003710) tnmd (ENSCHAG00000003718) elf1 (ENSCHAG00000003756) gsr (ENSCHAG00000003807) SLC39A8 (ENSCHAG00000004818) DGKQ (ENSCHAG00000004892) NFKB1 (ENSCHAG00000005322) UBE2D3 (ENSCHAG00000005527) ENSCHAG00000006390 ##22 CPXM1 (ENSCHAG00000009802) lyar (ENSCHAG00000009905) TMEM128 (ENSCHAG00000009912) OTOP1 (ENSCHAG00000009931) DRD5 (ENSCHAG00000009936) SLC2A9 (ENSCHAG00000009941) ENSCHAG00000009972 ENSCHAG00000009995 SLC25A53 (ENSCHAG00000010151) ENSCHAG00000010181 ENSCHAG00000010373 ENSCHAG00000010394 ENSCHAG00000010434 rnf20 (ENSCHAG00000010471) ENSCHAG00000011572 Otophysi ANCESTRAL SPECIES 29 ENSGT00950000183137.a.k ENSGT00390000007726.a.a ENSGT00940000158796 ENSGT00940000157919.a.a ENSGT00390000009747 ENSGT00940000165044 ENSGT00940000153169.A.b.b.e.a ENSGT00390000001670 ENSGT00940000158926 ENSGT00950000182932.A.b.a.b ENSGT00940000155378.c.a ENSGT00940000164014.a.a ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000153169.A.b.b.f ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.B ENSGT00530000063506.A ENSGT00530000063555.A.a.a ENSGT00950000183132.C ENSGT00390000001695 ENSGT00940000155341 ENSGT00940000155244.d ENSGT00940000153596.A ENSGT00390000013264 ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00940000162696.c.a ENSGT00940000159450 Cyprinoidei ANCESTRAL SPECIES 31 ENSGT00940000165849 ENSGT00940000161160 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00910000144291 ENSGT00940000160186 ENSGT00940000159626 ENSGT00950000182815.a.a.a.a.b ENSGT00940000160064.a.b ENSGT00940000159868.a ENSGT00390000000973.a.a ENSGT00390000014635 ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000153169.A.b.b.f ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.B ENSGT00530000063506.A ENSGT00530000063555.A.a.a ENSGT00950000183132.C ENSGT00390000001695 ENSGT00940000155341 ENSGT00940000155244.d ENSGT00940000153596.A ENSGT00950000182859.A.a.b.b.d.a ##22 ENSGT00940000155650.a.b ENSGT00940000161042 ENSGT00940000157770 ENSGT01030000234518.A.a.b ENSGT00950000182864.a.b.b.a.b.a.b ##21 ENSGT00390000011206.b.b Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 179 ENSGT00940000157197.d ENSGT00910000144291 ENSGT00940000160186.c.a.a ENSGT00940000159626.j ENSGT00940000160186.c.a.b ENSGT00940000159626.i.a ENSGT00950000182815.a.a.a.a.b.b ENSGT00940000160064.a.b.c ENSGT00940000155980.C.e ENSGT00940000156333.b ENSGT00390000000973.a.a.h ENSGT00390000014635.a ENSGT00940000158926.m.a ENSGT00940000159492.d ENSGT00940000158625.c.b ENSGT00950000182859.A.a.a.a.g ##22 ENSGT00940000156141.B.b Cyprininae_a ANCESTRAL SPECIES 179 ENSGT00940000157197.d ENSGT00910000144291 ENSGT00940000160186.c.a.a ENSGT00940000159626.j ENSGT00940000160186.c.a.b ENSGT00940000159626.i.a ENSGT00950000182815.a.a.a.a.b.b ENSGT00940000160064.a.b.c ENSGT00940000155980.C.e ENSGT00940000156333.b ENSGT00390000000973.a.a.h ENSGT00390000014635.a ENSGT00940000158926.m.a ENSGT00940000159492.d ENSGT00940000158625.c.b ENSGT00950000182859.A.a.a.a.g ##22 ENSGT00940000156141.B.b Common carp reference MODERN SPECIES 20 rnf44 (ENSCCRG00000057971) faf2 (ENSCCRG00000015650) pdlim7 (ENSCCRG00000015678) ENSCCRG00000069758 ENSCCRG00000002735 ENSCCRG00000065547 ENSCCRG00000075332 atoh1b (ENSCCRG00000072856) ENSCCRG00000041123 ENSCCRG00000041117 ENSCCRG00000064903 ENSCCRG00000041105 ENSCCRG00000041099 ENSCCRG00000000186 ENSCCRG00000015021 ENSCCRG00000079109 ##22 ENSCCRG00000009564 POLR2B (ENSCCRG00000009571) noa1 (ENSCCRG00000067936) rest (ENSCCRG00000007987) b4galt1l (ENSCCRG00000007980) ENSCCRG00000009649 tcerg1a (ENSCCRG00000056364) ENSCCRG00000068047 PPP2R2B (ENSCCRG00000009203) ##21 ENSCCRG00000001899 rpl26 (ENSCCRG00000059195) ENSCCRG00000074127 SLC49A3 (ENSCCRG00000001444) ENSCCRG00000072300 CPLX1 (ENSCCRG00000068863) Golden-line barbel MODERN SPECIES 207 faf2 (ENSSGRG00000030601) higd2a (ENSSGRG00000030594) CLTB (ENSSGRG00000030592) pdlim7 (ENSSGRG00000030577) unc5a (ENSSGRG00000030573) atoh1b (ENSSGRG00000030572) ENSSGRG00000030570 DDX41 (ENSSGRG00000030543) ENSSGRG00000030542 abhd18 (ENSSGRG00000030537) ENSSGRG00000030536 DGKQ (ENSSGRG00000030474) NFKB1 (ENSSGRG00000030100) ube2d2l (ENSSGRG00000029990) ENSSGRG00000029987 ENSSGRG00000029986 ##22 Goldfish MODERN SPECIES 32 ENSCARG00000066601 rnf44 (ENSCARG00000066616) faf2 (ENSCARG00000066649) higd2a (ENSCARG00000066684) CLTB (ENSCARG00000066692) pdlim7 (ENSCARG00000066709) unc5a (ENSCARG00000066769) atoh1b (ENSCARG00000066964) ENSCARG00000066977 DDX41 (ENSCARG00000067014) FAM193B (ENSCARG00000067131) abhd18 (ENSCARG00000067145) SLC39A8 (ENSCARG00000067239) DGKQ (ENSCARG00000067269) ENSCARG00000067505 ENSCARG00000068746 ##22 ENSCARG00000068760 b4galt1l (ENSCARG00000068775) ENSCARG00000068782 COX18 (ENSCARG00000068789) igfbp7 (ENSCARG00000068800) POLR2B (ENSCARG00000068826) rest (ENSCARG00000068952) b4galt1l (ENSCARG00000068995) tcerg1a (ENSCARG00000069053) GPR151 (ENSCARG00000069301) PPP2R2B (ENSCARG00000069310) ##21 ENSCARG00000069338 IL17B (ENSCARG00000069341) rpl26 (ENSCARG00000069348) atp6v0e1 (ENSCARG00000069354) Cyprininae ANCESTRAL SPECIES 39 ENSGT00990000211559 ENSGT00940000160186.c.b ENSGT00940000159626.i.b ENSGT00950000182815.a.a.a.a.b.a ENSGT00940000160064.a.b.d ENSGT00940000155980.C.f ENSGT00940000156333.a ENSGT00390000000973.a.a.g ENSGT00390000014635.b ENSGT00940000158926.m.b ENSGT00940000159492.c ENSGT00940000158625.d ENSGT00940000153169.A.b.b.f.b ENSGT00940000158625.c.a ENSGT00940000153169.A.b.b.f.a ENSGT00950000182859.A.a.a.a.h ##22 ENSGT00940000156141.B.a ENSGT00530000063506.A ENSGT00530000063555.A.a.a.l ENSGT00530000063555.A.a.a.k ENSGT00950000183132.C.r ENSGT00390000001695.h ENSGT00940000155341.e ENSGT00940000155244.d.n.a ENSGT00940000153596.A.d ENSGT00940000157770.i.a ENSGT01030000234518.A.a.b.b ENSGT00950000182864.a.b.b.a.b.a.b.e.a ##21 ENSGT00940000160854.a ENSGT00390000014165.e.b ENSGT00940000156866 Goldfish MODERN SPECIES 5 rpl26 (ENSCARG00000022708) IL17B (ENSCARG00000022715) PPP2R2B (ENSCARG00000022730) ##21 GPR151 (ENSCARG00000022802) tcerg1a (ENSCARG00000022823) ENSCARG00000022982 EXOSC3 (ENSCARG00000022985) b4galt1l (ENSCARG00000022993) rest (ENSCARG00000049908) noa1 (ENSCARG00000049915) POLR2B (ENSCARG00000049962) igfbp7 (ENSCARG00000050160) CPXM1 (ENSCARG00000050286) NFKB1 (ENSCARG00000050845) ube2d2l (ENSCARG00000052084) ENSCARG00000052159 ##22 SLC35F1 (ENSCARG00000053341) si:dkeyp-114g9.1 (ENSCARG00000053348) CEP85L (ENSCARG00000053378) PLN (ENSCARG00000053386) FAM184A (ENSCARG00000053412) ENSCARG00000053735 ENSCARG00000053770 ENSCARG00000053782 sncb (ENSCARG00000053812) ENSCARG00000053833 ctnna1 (ENSCARG00000053916) LRRTM2 (ENSCARG00000054595) ENSCARG00000054606 tspan17 (ENSCARG00000054628) SYNPO (ENSCARG00000054702) Cyprininae_a ANCESTRAL SPECIES 72 ENSGT00940000158553.b.b.b ENSGT00940000157197.c ENSGT00990000211559 ENSGT00940000159626.i.b ENSGT00950000182815.a.a.a.a.b.a ENSGT00940000160064.a.b.d ENSGT00940000155980.C.f ENSGT00940000159868.a ENSGT00940000156333.a ENSGT00390000000973.a.a.g ENSGT00390000014635.b ENSGT00940000158926.m.b ENSGT00940000159492.c ENSGT00940000158625.d ENSGT00940000153169.A.b.b.f.a ENSGT00950000182859.A.a.a.a.h ##22 ENSGT00940000156141.B.a ENSGT00530000063506.A ENSGT00530000063555.A.a.a.l ENSGT00530000063555.A.a.a.k ENSGT00950000183132.C.r ENSGT00390000001695.h ENSGT00940000155341.e ENSGT00940000155244.d.n.a ENSGT00940000153596.A.d ENSGT00940000157770.i.a ENSGT01030000234518.A.a.b.b ENSGT00950000182864.a.b.b.a.b.a.b.e.a ##21 ENSGT00940000160854.a ENSGT00390000014165.e.b ENSGT00940000156866 Common carp reference MODERN SPECIES 35 ENSCCRG00000059181 rnf44 (ENSCCRG00000015646) faf2 (ENSCCRG00000034845) ENSCCRG00000062001 ENSCCRG00000015663 pdlim7 (ENSCCRG00000054933) unc5a (ENSCCRG00000015755) ENSCCRG00000064347 ENSCCRG00000080870 ENSCCRG00000067164 ENSCCRG00000002139 ENSCCRG00000002152 ENSCCRG00000028287 ENSCCRG00000081355 ENSCCRG00000007116 ENSCCRG00000017912 ##22 ENSCCRG00000009494 ENSCCRG00000009500 igfbp7 (ENSCCRG00000009505) POLR2B (ENSCCRG00000009512) noa1 (ENSCCRG00000009546) rest (ENSCCRG00000060851) b4galt1l (ENSCCRG00000056290) ENSCCRG00000005389 tcerg1a (ENSCCRG00000005291) ENSCCRG00000080723 PPP2R2B (ENSCCRG00000001952) ##21 ENSCCRG00000069401 rpl26 (ENSCCRG00000079973) atp6v0e1 (ENSCCRG00000001909) ENSCCRG00000001903 Golden-line barbel MODERN SPECIES 88 atoh1b (ENSSGRG00000035483) ENSSGRG00000035484 DDX41 (ENSSGRG00000035487) ENSSGRG00000035502 abhd18 (ENSSGRG00000035503) ENSSGRG00000035505 DGKQ (ENSSGRG00000035506) NFKB1 (ENSSGRG00000035540) ube2d2l (ENSSGRG00000036800) ENSSGRG00000037428 ##22 CPXM1 (ENSSGRG00000037436) igfbp7 (ENSSGRG00000037480) POLR2B (ENSSGRG00000037481) noa1 (ENSSGRG00000037520) rest (ENSSGRG00000037521) b4galt1l (ENSSGRG00000037522) EXOSC3 (ENSSGRG00000037524) tcerg1a (ENSSGRG00000037528) GPR151 (ENSSGRG00000037926) PPP2R2B (ENSSGRG00000037929) ##21 IL17B (ENSSGRG00000038900) ENSSGRG00000038901 rpl26 (ENSSGRG00000038902) ENSSGRG00000038911 TSTD2 (ENSSGRG00000038915) Characiphysae ANCESTRAL SPECIES 13 ENSGT00940000160193 ENSGT00940000157266.a ENSGT01100000263497.C ENSGT00950000183137.a.k ENSGT00390000007726.a.a ENSGT00940000158796 ENSGT00390000009747 ENSGT00940000165044 ENSGT00940000153169.A.b.b.e.a ENSGT00390000001670 ENSGT00940000158926 ENSGT00950000182932.A.b.a.b ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000153169.A.b.b.f ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.B ENSGT00530000063506.A ENSGT00530000063555.A.a.a ENSGT00950000183132.C ENSGT00390000001695 Channel catfish MODERN SPECIES 11 Higd2a (ENSIPUG00000016523) cltb (ENSIPUG00000016487) pdlim7 (ENSIPUG00000016370) unc5a (ENSIPUG00000016301) ENSIPUG00000016266 atoh1b (ENSIPUG00000016247) Dok3 (ENSIPUG00000016236) ddx41 (ENSIPUG00000016171) fam193b (ENSIPUG00000016156) abhd18 (ENSIPUG00000016126) slc39a8 (ENSIPUG00000016111) dgkq (ENSIPUG00000016054) NFKB1 (ENSIPUG00000016031) ube2d2 (ENSIPUG00000015982) ENSIPUG00000015964 ENSIPUG00000015903 ##22 CPXM1 (ENSIPUG00000015727) COX18 (ENSIPUG00000015703) Igfbp7 (ENSIPUG00000015686) POLR2B (ENSIPUG00000015595) noa1 (ENSIPUG00000015583) eef2kmt (ENSIPUG00000015572) Alg1 (ENSIPUG00000015526) c2h16orf89 (ENSIPUG00000015508) flr (ENSIPUG00000015452) ENSIPUG00000015442 gsg1l (ENSIPUG00000015429) fbxl16 (ENSIPUG00000015414) sept12 (ENSIPUG00000015361) ENSIPUG00000015334 ENSIPUG00000015325 Characiphysae_b ANCESTRAL SPECIES 10 ENSGT00940000160193 ENSGT00940000157266.a ENSGT01100000263497.C ENSGT00950000183137.a.k ENSGT00390000007726.a.a ENSGT00940000158796 ENSGT00390000009747 ENSGT00940000165044 ENSGT00940000153169.A.b.b.e.a ENSGT00390000001670 ENSGT00940000158926 ENSGT00950000182932.A.b.a.b ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000153169.A.b.b.f ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.B ENSGT00530000063506.A ENSGT00530000063555.A.a.a ENSGT00950000183132.C ENSGT00390000001695 ENSGT00940000155341 ENSGT00390000013264 ENSGT00940000159397 ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00940000162696.c.a ENSGT00940000159450 ENSGT00940000157994 ENSGT00390000010950 ENSGT00940000162201.p Electric eel MODERN SPECIES 606 ENSEEEG00000015958 ##22 CPXM1 (ENSEEEG00000015949) COX18 (ENSEEEG00000015947) igfbp7 (ENSEEEG00000015944) polr2b (ENSEEEG00000015928) noa1 (ENSEEEG00000015923) rest (ENSEEEG00000015922) b4galt1l (ENSEEEG00000015921) Characoidei ANCESTRAL SPECIES 5 ENSGT00940000160193 ENSGT00940000157266.a ENSGT01100000263497.C ENSGT00950000183137.a.k ENSGT00390000007726.a.a ENSGT00940000158796 ENSGT00390000009747 ENSGT00940000165044 ENSGT00940000153169.A.b.b.e.a ENSGT00390000001670 ENSGT00940000158926 ENSGT00950000182932.A.b.a.b ENSGT00940000159492 ENSGT00940000158625 ENSGT00940000153169.A.b.b.f ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.B ENSGT00530000063506.A ENSGT00530000063555.A.a.a ENSGT00950000183132.C ENSGT00390000001695 ENSGT00940000155341 ENSGT00390000013264 ENSGT00940000159397 ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00940000162696.c.a ENSGT00940000159450 ENSGT00940000157994 ENSGT00390000010950 ENSGT00940000162201.p Red-bellied piranha MODERN SPECIES 118 rnf44 (ENSPNAG00000012696) faf2 (ENSPNAG00000012685) higd2a (ENSPNAG00000002340) CLTB (ENSPNAG00000002332) pdlim7 (ENSPNAG00000012610) unc5a (ENSPNAG00000002292) atoh1b (ENSPNAG00000002261) ENSPNAG00000005483 DDX41 (ENSPNAG00000002248) FAM193B (ENSPNAG00000012380) abhd18 (ENSPNAG00000012361) SLC39A8 (ENSPNAG00000012306) DGKQ (ENSPNAG00000002185) NFKB1 (ENSPNAG00000002169) ENSPNAG00000012197 ENSPNAG00000002121 ##22 CPXM1 (ENSPNAG00000002105) COX18 (ENSPNAG00000002093) igfbp7 (ENSPNAG00000012081) polr2b (ENSPNAG00000012064) noa1 (ENSPNAG00000012000) rest (ENSPNAG00000011987) b4galt1l (ENSPNAG00000011957) Mexicana tetra MODERN SPECIES 11 atoh1b (ENSAMXG00000037490) ENSAMXG00000043080 unc5a (ENSAMXG00000003028) pdlim7 (ENSAMXG00000003081) CLTB (ENSAMXG00000039610) higd2a (ENSAMXG00000003114) faf2 (ENSAMXG00000003126) rnf44 (ENSAMXG00000003157) ENSAMXG00000003182 smim13 (ENSAMXG00000044025) abhd18 (ENSAMXG00000003231) SLC39A8 (ENSAMXG00000003260) DGKQ (ENSAMXG00000003289) ENSAMXG00000003341 ube2d2l (ENSAMXG00000042000) EBF4 (ENSAMXG00000003402) ##22 ENSAMXG00000032159 CPXM1 (ENSAMXG00000031678) COX18 (ENSAMXG00000004071) igfbp7 (ENSAMXG00000032537) POLR2B (ENSAMXG00000004040) noa1 (ENSAMXG00000004024) rest (ENSAMXG00000034467) b4galt1l (ENSAMXG00000040507) SRP72 (ENSAMXG00000004011) arl9 (ENSAMXG00000036996) hopx (ENSAMXG00000035297) SEC24B (ENSAMXG00000003992) ENSAMXG00000025565 SLC16A2 (ENSAMXG00000003977) ENSAMXG00000003967 Osteoglossiformes ANCESTRAL SPECIES 432 ENSGT00940000158625.a.b ENSGT00940000153169.A.b.b.e.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.B ENSGT00950000182932.A.b.a.b.qb ENSGT00940000155378.c.b ENSGT00390000002231 ENSGT00940000158971.`b.a ENSGT00940000161036.A.e Asian bonytongue MODERN SPECIES 20 ENSSFOG00015004434 ENSSFOG00015030317 ENSSFOG00015027908 atp8a1 (ENSSFOG00015006132) shisa3 (ENSSFOG00015006116) BEND4 (ENSSFOG00015029374) slc30a9 (ENSSFOG00015006091) gsr (ENSSFOG00015005713) wdr32 (ENSSFOG00015005643) DGKQ (ENSSFOG00015005508) SLC39A8 (ENSSFOG00015005498) ENSSFOG00015030210 ENSSFOG00015008358 si:ch211-165i18.2 (ENSSFOG00015005448) ENSSFOG00015005427 ENSSFOG00015005383 ##22 CPXM1 (ENSSFOG00015005306) ENSSFOG00015028984 dctn1a (ENSSFOG00015005234) ADAM33 (ENSSFOG00015005203) ENSSFOG00015005186 nanos1 (ENSSFOG00015031529) ENSSFOG00015005135 pcgf1 (ENSSFOG00015005089) fgf24 (ENSSFOG00015005073) npm1b (ENSSFOG00015005064) tlx2 (ENSSFOG00015005040) kazald2 (ENSSFOG00015024509) mrps26 (ENSSFOG00015025476) aup1 (ENSSFOG00015004967) ENSSFOG00015028723 P. kingsleyae DUPLICATION P. kingsleyae MODERN SPECIES 264 ENSPKIG00000010969 ATP8A1 (ENSPKIG00000011029) shisa3 (ENSPKIG00000011175) BEND4 (ENSPKIG00000011193) slc30a9 (ENSPKIG00000011211) DGKQ (ENSPKIG00000011257) SLC39A8 (ENSPKIG00000011365) ENSPKIG00000011417 UBE2D3 (ENSPKIG00000011458) ENSPKIG00000011510 ##22 CPXM1 (ENSPKIG00000011606) ENSPKIG00000011635 dctn1a (ENSPKIG00000011686) fam113 (ENSPKIG00000011761) ADAM33 (ENSPKIG00000011778) ENSPKIG00000011819 P. kingsleyae MODERN SPECIES 149 nat14 (ENSPKIG00000001489) ENSPKIG00000001476 ENSPKIG00000001446 rasip1 (ENSPKIG00000001398) cox6b2 (ENSPKIG00000001372) GBP1 (ENSPKIG00000001343) ENSPKIG00000001311 has1 (ENSPKIG00000001273) ENSPKIG00000001253 ENSPKIG00000001231 ENSPKIG00000001218 TENM3 (ENSPKIG00000001176) ENSPKIG00000001157 vegfc (ENSPKIG00000001136) spcs3 (ENSPKIG00000001115) ENSPKIG00000001073 ##22 ENSPKIG00000001058 DCTN1 (ENSPKIG00000000855) ENSPKIG00000000767 ENSPKIG00000000758 CPXM1 (ENSPKIG00000000727) si:dkey-33c12.12 (ENSPKIG00000000701) si:dkey-33c12.3 (ENSPKIG00000000695) ENSPKIG00000000681 fgf24 (ENSPKIG00000000666) PCGF1 (ENSPKIG00000000641) lbx2 (ENSPKIG00000000628) nanos1 (ENSPKIG00000000617) Sarcopterygii ANCESTRAL SPECIES 404 ENSGT01030000234518.A.a.a ENSGT00940000165044 ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00950000182932.A.b.a.a.a ENSGT00390000002231 ENSGT00940000158971 ENSGT00940000153123.B ENSGT00940000179269 Tetrapoda ANCESTRAL SPECIES 3 ENSGT00940000159032 ENSGT00390000008711 ENSGT00910000144159.A.a ENSGT00940000158524 ENSGT00390000013178 ENSGT01030000234518.A.a.a ENSGT00940000165044 ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00950000182932.A.b.a.b ENSGT00940000160491 ENSGT00940000157346 ENSGT00390000003692 ENSGT00940000165596 ENSGT00940000154894 ENSGT01010000222287.B.a.a.b ENSGT00730000112302 ENSGT00390000017193 ENSGT00940000154078.b ENSGT01030000234607.A.a.b.b ENSGT00510000049555 ENSGT00390000004511.c.a ENSGT00390000004511.d Anura ANCESTRAL SPECIES 259 ENSGT01030000234518.A.a.a ENSGT00940000165044 ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00950000182932.A.b.a.a.a ENSGT00950000182932.A.b.a.b.rb.a ENSGT00950000182932.A.b.a.b.rb.b ENSGT00950000182932.A.b.a.a.b.k ENSGT00950000182932.A.b.a.a.b.l ENSGT00390000002231 ENSGT00940000158971 Frog MODERN SPECIES exoc6b (ENSXETG00000021542) ENSXETG00000048433 cyp26b1 (ENSXETG00000046186) ENSXETG00000048922 DYSF (ENSXETG00000015757) ENSXETG00000045245 znf638 (ENSXETG00000015780) cdc25b (ENSXETG00000012740) ENSXETG00000012742 spef1 (ENSXETG00000032089) c20orf27 (ENSXETG00000047185) hspa12b (ENSXETG00000012748) lyrm2 (ENSXETG00000012750) XB22166511 [provisional:gpr151] (ENSXETG00000012752) rnf145l (ENSXETG00000012753) coe3l (ENSXETG00000030294) ##22 cpxm1 (ENSXETG00000012756) nat8.1 (ENSXETG00000012759) nat8.2 (ENSXETG00000026706) nat8.6 (ENSXETG00000036460) ENSXETG00000031469 nat8.5 (ENSXETG00000047719) nat8.7 (ENSXETG00000026704) pced1a (ENSXETG00000012763) adam33 (ENSXETG00000011758) art5 (ENSXETG00000011761) ENSXETG00000043141 ENSXETG00000033287 mid1l2 (ENSXETG00000011762) smyd5 (ENSXETG00000043500) ENSXETG00000042875 Leishan spiny toad MODERN SPECIES ENSLLEG00000000964 ENSLLEG00000000958 ENSLLEG00000000939 ENSLLEG00000000921 ENSLLEG00000000909 ENSLLEG00000000895 ENSLLEG00000000861 ENSLLEG00000000850 DCTN1 (ENSLLEG00000000576) ENSLLEG00000000515 ENSLLEG00000000497 ENSLLEG00000000478 ENSLLEG00000000469 EBF4 (ENSLLEG00000000245) ##22 ENSLLEG00000000191 ENSLLEG00000000185 CPXM1 (ENSLLEG00000000152) ENSLLEG00000000139 ENSLLEG00000000126 ENSLLEG00000000123 ENSLLEG00000000113 ENSLLEG00000000106 ENSLLEG00000000099 ENSLLEG00000000094 ENSLLEG00000017130 ENSLLEG00000017102 ENSLLEG00000017065 ENSLLEG00000017037 ENSLLEG00000016962 Amniota ANCESTRAL SPECIES 2 ENSGT00940000156187 ENSGT00940000153322.A ENSGT00390000017284.a.b ENSGT00510000047418 ENSGT00390000010888 ENSGT00390000005650 ENSGT00940000161413 ENSGT00940000161043 ENSGT01100000263535.a.a ENSGT00940000159032 ENSGT00390000008711 ENSGT00910000144159.A.a ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000165044 ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00950000182932.A.b.a.a.a ENSGT00940000179269 ENSGT00940000153123.B ENSGT00940000158971 ENSGT00940000160491 ENSGT00940000157346 ENSGT00390000003692 ENSGT00940000165596 ENSGT00940000154894 ENSGT01010000222287.B.a.a.b ENSGT00940000169304 ENSGT00940000154078.b ENSGT01030000234607.A.a.b.b ENSGT00510000049555 Mammalia ANCESTRAL SPECIES 79 ENSGT00940000159651 ENSGT00940000162295 ENSGT00940000161036.A ENSGT00390000009871 ENSGT00390000001440 ENSGT00390000017452 ENSGT00950000183109.d ENSGT00390000001754 ENSGT00940000158491 ENSGT00390000014530 ENSGT00390000014979 ENSGT00940000163763 ENSGT00940000155378.d ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00950000182932.A.b.a.b ENSGT00940000158971 ENSGT00940000160491 ENSGT00940000157346 ENSGT00390000003692 ENSGT00940000165600 ENSGT00940000168737 ENSGT00940000154894 ENSGT00390000017193 ENSGT00940000154078.b ENSGT01030000234607.A.a.b.b ENSGT00510000049555 ENSGT00390000004511.d ENSGT00390000008453 Theria ANCESTRAL SPECIES 49 ENSGT00940000159651 ENSGT00940000162295 ENSGT00940000161036.A ENSGT00390000009871 ENSGT00390000001440 ENSGT00390000017452 ENSGT00950000183109.d ENSGT00390000001754 ENSGT00940000158491 ENSGT00390000014530 ENSGT00390000014979 ENSGT00940000163763 ENSGT00940000155378.d ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000004511.d.a.b ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 ENSGT00940000154894 Marsupialia ANCESTRAL SPECIES 7 ENSGT00940000162295 ENSGT00940000161036.A ENSGT00390000009871 ENSGT00390000001440 ENSGT00390000017452 ENSGT00950000183109.d ENSGT00390000001754 ENSGT00940000158491 ENSGT00390000014530 ENSGT00390000014979 ENSGT00940000163763 ENSGT00940000155378.d ENSGT00940000153534.B ENSGT00950000182989.D.a.b.i.a ENSGT00950000182989.D.a.b.i.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.b ENSGT00390000004511.d.a.b.a ENSGT00390000004511.d.a.b.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Marsupialia_b ANCESTRAL SPECIES 8 ENSGT00940000159651 ENSGT00940000162295 ENSGT00940000161036.A ENSGT00390000009871 ENSGT00390000001440 ENSGT00390000017452 ENSGT00950000183109.d ENSGT00390000001754 ENSGT00940000158491 ENSGT00390000014530 ENSGT00390000014979 ENSGT00940000163763 ENSGT00940000155378.d ENSGT00940000153534.B ENSGT00950000182989.D.a.b.i.a ENSGT00950000182859.A.a.a.a ##22 ENSGT00950000182932.A.b.a.b.ub ENSGT00940000156141.C ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.b ENSGT00390000004511.d.a.b.a ENSGT00390000004511.d.a.b.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 Diprotodontia ANCESTRAL SPECIES 10 ENSGT00940000159651 ENSGT00940000162295 ENSGT00940000161036.A ENSGT00390000009871 ENSGT00390000001440 ENSGT00390000017452 ENSGT00950000183109.d ENSGT00390000001754 ENSGT00940000158491 ENSGT00390000014530 ENSGT00390000014979 ENSGT00940000163763 ENSGT00940000155378.d ENSGT00940000153534.B ENSGT00950000182989.D.a.b.i.a ENSGT00950000182859.A.a.a.a ##22 ENSGT00950000182932.A.b.a.b.ub ENSGT00940000156141.C ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.b ENSGT00390000004511.d.a.b.a ENSGT00390000004511.d.a.b.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 Diprotodontia_a ANCESTRAL SPECIES 12 ENSGT00940000159651 ENSGT00940000162295 ENSGT00940000161036.A ENSGT00390000009871 ENSGT00390000001440 ENSGT00390000017452 ENSGT00950000183109.d ENSGT00390000001754 ENSGT00940000158491 ENSGT00390000014530 ENSGT00390000014979 ENSGT00940000163763 ENSGT00940000155378.d ENSGT00940000153534.B ENSGT00950000182989.D.a.b.i.a ENSGT00950000182859.A.a.a.a ##22 ENSGT00950000182932.A.b.a.b.ub ENSGT00940000156141.C ENSGT00390000005090 ENSGT00390000002231.c.d ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.b.a ENSGT00390000004511.d.a.b.a ENSGT00390000004511.d.a.b.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 Common wonbat MODERN SPECIES 1054 PCGF1 (ENSVURG00010020226) LBX2 (ENSVURG00010020221) ENSVURG00010020212 CCDC142 (ENSVURG00010020202) MRPL53 (ENSVURG00010020194) MOGS (ENSVURG00010020190) WBP1 (ENSVURG00010020185) INO80B (ENSVURG00010020179) RTKN (ENSVURG00010020167) WDR54 (ENSVURG00010020158) ENSVURG00010020141 ENSVURG00010020131 DCTN1 (ENSVURG00010020041) NOP56 (ENSVURG00010020029) ENSVURG00010020027 EBF4 (ENSVURG00010020014) ##22 ENSVURG00010020009 CPXM1 (ENSVURG00010019996) TMEM239 (ENSVURG00010019985) ENSVURG00010019980 VPS16 (ENSVURG00010019951) PTPRA (ENSVURG00010019910) ENSVURG00010019894 MRPS26 (ENSVURG00010019885) ENSVURG00010019871 ENSVURG00010019865 ENSVURG00010019858 ENSVURG00010019843 UBOX5 (ENSVURG00010019831) LZTS3 (ENSVURG00010019825) DDRGK1 (ENSVURG00010019812) koala MODERN SPECIES 108 PCGF1 (ENSPCIG00000006054) LBX2 (ENSPCIG00000036023) ENSPCIG00000006050 ENSPCIG00000006049 MRPL53 (ENSPCIG00000036051) MOGS (ENSPCIG00000006047) WBP1 (ENSPCIG00000006046) INO80B (ENSPCIG00000035598) RTKN (ENSPCIG00000006038) WDR54 (ENSPCIG00000006035) ENSPCIG00000034734 ENSPCIG00000002976 DCTN1 (ENSPCIG00000006012) NOP56 (ENSPCIG00000005997) ENSPCIG00000005985 EBF4 (ENSPCIG00000000836) ##22 ENSPCIG00000000694 CPXM1 (ENSPCIG00000000683) TMEM239 (ENSPCIG00000000664) ENSPCIG00000000648 VPS16 (ENSPCIG00000000611) PTPRA (ENSPCIG00000000563) ENSPCIG00000000532 MRPS26 (ENSPCIG00000000516) ENSPCIG00000036942 ENSPCIG00000000490 ENSPCIG00000033226 ENSPCIG00000000402 ENSPCIG00000000333 UBOX5 (ENSPCIG00000000303) FASTKD5 (ENSPCIG00000000271) Wallaby MODERN SPECIES 586 EBF4 (ENSMEUG00000015344) ##22 Tasmanian devil MODERN SPECIES 5 HTRA2 (ENSSHAG00000027709) AUP1 (ENSSHAG00000016825) DQX1 (ENSSHAG00000016833) PCGF1 (ENSSHAG00000022147) TLX2 (ENSSHAG00000021321) LBX2 (ENSSHAG00000023088) ENSSHAG00000020486 MOGS (ENSSHAG00000027948) RTKN (ENSSHAG00000016985) WDR54 (ENSSHAG00000017008) ENSSHAG00000017016 ENSSHAG00000000494 ENSSHAG00000017096 ENSSHAG00000017162 ENSSHAG00000017173 EBF4 (ENSSHAG00000017239) ##22 ENSSHAG00000025855 CPXM1 (ENSSHAG00000017413) TMEM239 (ENSSHAG00000016739) PCED1A (ENSSHAG00000004542) VPS16 (ENSSHAG00000003874) PTPRA (ENSSHAG00000002546) ENSSHAG00000001708 ENSSHAG00000029981 FASTKD5 (ENSSHAG00000002856) LZTS3 (ENSSHAG00000003393) DDRGK1 (ENSSHAG00000003893) ITPA (ENSSHAG00000022102) SLC4A11 (ENSSHAG00000004464) ENSSHAG00000005305 ENSSHAG00000031585 Opossum MODERN SPECIES 4 PCGF1 (ENSMODG00000004920) LBX2 (ENSMODG00000004927) CCDC142 (ENSMODG00000004951) MOGS (ENSMODG00000004961) ENSMODG00000036790 WBP1 (ENSMODG00000004968) INO80B (ENSMODG00000004975) RTKN (ENSMODG00000004982) WDR54 (ENSMODG00000004993) ENSMODG00000004997 ENSMODG00000005013 DCTN1 (ENSMODG00000005141) ENSMODG00000023604 NOP56 (ENSMODG00000005184) IDH3B (ENSMODG00000005208) EBF4 (ENSMODG00000005256) ##22 CPXM1 (ENSMODG00000005298) TMEM239 (ENSMODG00000024670) VPS16 (ENSMODG00000005349) PTPRA (ENSMODG00000005400) MRPS26 (ENSMODG00000005409) ENSMODG00000005441 ENSMODG00000005416 UBOX5 (ENSMODG00000005454) FASTKD5 (ENSMODG00000042277) LZTS3 (ENSMODG00000005461) DDRGK1 (ENSMODG00000036979) ITPA (ENSMODG00000005474) SLC4A11 (ENSMODG00000029249) ENSMODG00000005523 TMEM175 (ENSMODG00000005555) Eutheria ANCESTRAL SPECIES 11 ENSGT00940000153311.a.b.a ENSGT00520000055567.a.a.a ENSGT00960000186656.a.b ENSGT00960000186656.a.a.a.b ENSGT00960000186656.a.a.b ENSGT00960000186656.a.a.a.a.b ENSGT00940000171162 ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00940000165014 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000004511.d.a.b ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Boreoeutheria ANCESTRAL SPECIES 17 ENSGT00960000186656.a.b ENSGT00960000186656.a.a.b ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b ENSGT00960000186656.a.a.a.b ENSGT00960000186656.a.a.a.a.a.a.a ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Laurasiatheria ANCESTRAL SPECIES 17 ENSGT00520000055567.a.a.a ENSGT00960000186656.a.b ENSGT00960000186656.a.a.b ENSGT00960000186656.a.a.a.a.a.b ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.a.a ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Eulipotyphla ANCESTRAL SPECIES ENSGT00950000182859.A.a.a.a ##22 Hedgehog MODERN SPECIES 115 EBF4 (ENSEEUG00000006485) ##22 Laurasiatheria_a ANCESTRAL SPECIES 18 ENSGT00520000055567.a.a.a ENSGT00960000186656.a.b ENSGT00960000186656.a.a.b ENSGT00960000186656.a.a.a.a.a.b ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.a.a ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Artiodactyla ANCESTRAL SPECIES 18 ENSGT00960000186656.a.b ENSGT00960000186656.a.a.a.b ENSGT00960000186656.a.a.b ENSGT00960000186656.a.a.a.a.a.b ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.a.a ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Suina ANCESTRAL SPECIES 9 ENSGT00490000044517 ENSGT00940000161638 ENSGT00520000055634.b ENSGT00940000161179 ENSGT00940000153311.a.b.a ENSGT00520000055567.a.a.a ENSGT00960000186656.a.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Chacoan peccary MODERN SPECIES 801 SDCBP2 (ENSCWAG00000010111) ENSCWAG00000010156 NSFL1C (ENSCWAG00000010255) SIRPB2 (ENSCWAG00000010375) ENSCWAG00000010401 ENSCWAG00000010418 ENSCWAG00000010452 PDYN (ENSCWAG00000010609) STK35 (ENSCWAG00000010634) TGM3 (ENSCWAG00000010664) TGM6 (ENSCWAG00000010767) SNRPB (ENSCWAG00000010961) TMC2 (ENSCWAG00000011005) NOP56 (ENSCWAG00000011165) IDH3B (ENSCWAG00000011352) EBF4 (ENSCWAG00000011507) ##22 CPXM1 (ENSCWAG00000011935) C20orf141 (ENSCWAG00000011970) TMEM239 (ENSCWAG00000012015) PCED1A (ENSCWAG00000012131) VPS16 (ENSCWAG00000012219) PTPRA (ENSCWAG00000012764) GNRH2 (ENSCWAG00000012966) MRPS26 (ENSCWAG00000013106) ENSCWAG00000013142 AVP (ENSCWAG00000013171) UBOX5 (ENSCWAG00000013211) LZTS3 (ENSCWAG00000013258) DDRGK1 (ENSCWAG00000013305) ITPA (ENSCWAG00000013354) SLC4A11 (ENSCWAG00000013525) Pig MODERN SPECIES 8 NSFL1C (ENSSSCG00000007187) SIRPB2 (ENSSSCG00000007185) ENSSSCG00000063284 ENSSSCG00000007186 ENSSSCG00000007181 ENSSSCG00000027665 ENSSSCG00000028461 PDYN (ENSSSCG00000037684) STK35 (ENSSSCG00000007179) TGM3 (ENSSSCG00000026043) TGM6 (ENSSSCG00000034528) SNRPB (ENSSSCG00000040857) TMC2 (ENSSSCG00000007172) NOP56 (ENSSSCG00000027676) IDH3B (ENSSSCG00000007173) EBF4 (ENSSSCG00000007171) ##22 CPXM1 (ENSSSCG00000007170) C20orf141 (ENSSSCG00000040428) TMEM239 (ENSSSCG00000007169) PCED1A (ENSSSCG00000007168) VPS16 (ENSSSCG00000007167) PTPRA (ENSSSCG00000007166) GNRH2 (ENSSSCG00000043185) MRPS26 (ENSSSCG00000007165) OXT (ENSSSCG00000007164) AVP (ENSSSCG00000007163) UBOX5 (ENSSSCG00000007162) FASTKD5 (ENSSSCG00000045134) LZTS3 (ENSSSCG00000007161) DDRGK1 (ENSSSCG00000007160) ITPA (ENSSSCG00000035995) Artiodactyla_a ANCESTRAL SPECIES 16 ENSGT00960000186656.a.b ENSGT00960000186656.a.a.a.b ENSGT00960000186656.a.a.b ENSGT00960000186656.a.a.a.a.a.b ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.a.a ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Camelidae ANCESTRAL SPECIES 49 ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00510000049555 ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 ENSGT00940000154894 ENSGT00390000003692 ENSGT00940000157346 Arabian camel MODERN SPECIES 10 NSFL1C (ENSCDRG00005012951) SIRPB2 (ENSCDRG00005012904) ENSCDRG00005012176 ENSCDRG00005012140 ENSCDRG00005011991 ENSCDRG00005011841 ENSCDRG00005011793 PDYN (ENSCDRG00005011753) STK35 (ENSCDRG00005011709) TGM3 (ENSCDRG00005011590) TGM6 (ENSCDRG00005011349) SNRPB (ENSCDRG00005011238) TMC2 (ENSCDRG00005011052) NOP56 (ENSCDRG00005010859) IDH3B (ENSCDRG00005010680) EBF4 (ENSCDRG00005010379) ##22 CPXM1 (ENSCDRG00005010145) C20orf141 (ENSCDRG00005010114) TMEM239 (ENSCDRG00005010100) PCED1A (ENSCDRG00005010022) VPS16 (ENSCDRG00005009793) PTPRA (ENSCDRG00005009357) ENSCDRG00005009183 MRPS26 (ENSCDRG00005009132) UBOX5 (ENSCDRG00005008999) LZTS3 (ENSCDRG00005008882) DDRGK1 (ENSCDRG00005008807) ITPA (ENSCDRG00005012985) SLC4A11 (ENSCDRG00005012388) DNAAF9 (ENSCDRG00005012051) ATRN (ENSCDRG00005011671) Artiodactyla_b ANCESTRAL SPECIES 17 ENSGT00940000161179 ENSGT00940000153311.a.b.a.i.b ENSGT00520000055567.a.a.a ENSGT00960000186656.a.b ENSGT00960000186656.a.a.b ENSGT00960000186656.a.a.a.a.a.a.a ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Cetacea ANCESTRAL SPECIES 3 ENSGT00520000055634.b ENSGT00940000161179 ENSGT00940000153311.a.b.a.i.b ENSGT00520000055567.a.a.a ENSGT00960000186656.a.b ENSGT00960000186656.a.a.a.a.a.a.a ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Odontoceti ANCESTRAL SPECIES 3 ENSGT00520000055634.b ENSGT00940000161179 ENSGT00940000153311.a.b.a.i.b ENSGT00520000055567.a.a.a ENSGT00960000186656.a.b ENSGT00960000186656.a.a.a.a.a.a.a ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Odontoceti_a ANCESTRAL SPECIES 3 ENSGT00520000055634.b ENSGT00940000161179 ENSGT00940000153311.a.b.a.i.b ENSGT00520000055567.a.a.a ENSGT00960000186656.a.b ENSGT00960000186656.a.a.a.a.a.a.a.c ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a.d ENSGT00940000155052.e.a ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Odontoceti_b ANCESTRAL SPECIES 3 ENSGT00940000161179 ENSGT00940000153311.a.b.a.i.b ENSGT00520000055567.a.a.a ENSGT00960000186656.a.b ENSGT00960000186656.a.a.a.a.a.a.a.d ENSGT00960000186656.a.a.a.a.a.a.a.c ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a.d ENSGT00940000155052.e.a ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Monodontidae ANCESTRAL SPECIES 1 ENSGT00520000055634.b ENSGT00940000161179 ENSGT00940000153311.a.b.a.i.b ENSGT00520000055567.a.a.a ENSGT00960000186656.a.b ENSGT00960000186656.a.a.a.a.a.a.a.d ENSGT00960000186656.a.a.a.a.a.a.a.c ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a.d ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Narwhal MODERN SPECIES 299 SDCBP2 (ENSMMNG00015001232) ENSMMNG00015001271 NSFL1C (ENSMMNG00015001330) SIRPB2 (ENSMMNG00015001376) ENSMMNG00015001420 ENSMMNG00015001480 PDYN (ENSMMNG00015001508) STK35 (ENSMMNG00015001525) TGM3 (ENSMMNG00015001551) ENSMMNG00015001588 SNRPB (ENSMMNG00015001632) TMC2 (ENSMMNG00015001663) NOP56 (ENSMMNG00015001705) IDH3B (ENSMMNG00015001770) ENSMMNG00015001801 EBF4 (ENSMMNG00015001864) ##22 CPXM1 (ENSMMNG00015001922) C20orf141 (ENSMMNG00015001961) TMEM239 (ENSMMNG00015001983) PCED1A (ENSMMNG00015001996) VPS16 (ENSMMNG00015002058) PTPRA (ENSMMNG00015002181) GNRH2 (ENSMMNG00015002258) MRPS26 (ENSMMNG00015002286) ENSMMNG00015002307 AVP (ENSMMNG00015002327) UBOX5 (ENSMMNG00015002354) LZTS3 (ENSMMNG00015002379) DDRGK1 (ENSMMNG00015002411) ITPA (ENSMMNG00015002442) SLC4A11 (ENSMMNG00015002544) Beluga whale MODERN SPECIES 36 SDCBP2 (ENSDLEG00000013824) FKBP1A (ENSDLEG00000013838) NSFL1C (ENSDLEG00000013852) SIRPB2 (ENSDLEG00000013872) ENSDLEG00000013913 SIRPA (ENSDLEG00000014076) PDYN (ENSDLEG00000014109) STK35 (ENSDLEG00000014120) TGM3 (ENSDLEG00000014134) ENSDLEG00000014182 SNRPB (ENSDLEG00000014208) TMC2 (ENSDLEG00000014230) NOP56 (ENSDLEG00000014282) IDH3B (ENSDLEG00000014335) ENSDLEG00000014376 EBF4 (ENSDLEG00000014409) ##22 CPXM1 (ENSDLEG00000014437) TMEM239 (ENSDLEG00000014458) PCED1A (ENSDLEG00000014467) VPS16 (ENSDLEG00000014501) PTPRA (ENSDLEG00000014710) GNRH2 (ENSDLEG00000014803) MRPS26 (ENSDLEG00000014812) OXT (ENSDLEG00000014822) AVP (ENSDLEG00000014830) UBOX5 (ENSDLEG00000014837) FASTKD5 (ENSDLEG00000014849) LZTS3 (ENSDLEG00000014855) DDRGK1 (ENSDLEG00000014873) ENSDLEG00000014890 ENSDLEG00000014901 Vaquita MODERN SPECIES 6 SDCBP2 (ENSPSNG00000008976) ENSPSNG00000009021 NSFL1C (ENSPSNG00000009290) SIRPB2 (ENSPSNG00000009368) ENSPSNG00000009400 ENSPSNG00000009437 PDYN (ENSPSNG00000009476) STK35 (ENSPSNG00000009511) TGM3 (ENSPSNG00000009557) TGM6 (ENSPSNG00000009698) SNRPB (ENSPSNG00000009920) ENSPSNG00000010018 TMC2 (ENSPSNG00000010067) NOP56 (ENSPSNG00000010297) IDH3B (ENSPSNG00000010397) EBF4 (ENSPSNG00000010517) ##22 CPXM1 (ENSPSNG00000010775) C20orf141 (ENSPSNG00000010931) TMEM239 (ENSPSNG00000010997) PCED1A (ENSPSNG00000011017) VPS16 (ENSPSNG00000011145) PTPRA (ENSPSNG00000011277) GNRH2 (ENSPSNG00000011366) MRPS26 (ENSPSNG00000011474) ENSPSNG00000011530 AVP (ENSPSNG00000011588) UBOX5 (ENSPSNG00000011645) FASTKD5 (ENSPSNG00000011702) LZTS3 (ENSPSNG00000011749) DDRGK1 (ENSPSNG00000011849) ITPA (ENSPSNG00000012001) Dolphin MODERN SPECIES 3131 NOP56 (ENSTTRG00000003451) IDH3B (ENSTTRG00000003456) EBF4 (ENSTTRG00000003459) ##22 CPXM1 (ENSTTRG00000003461) ENSTTRG00000003463 PCED1A (ENSTTRG00000003464) VPS16 (ENSTTRG00000003465) Sperm whale MODERN SPECIES 5 RAD21L1 (ENSPCTG00005004743) FKBP1A (ENSPCTG00005004776) SNPH (ENSPCTG00005004784) ENSPCTG00005004812 NSFL1C (ENSPCTG00005004856) ENSPCTG00005004902 SIRPA (ENSPCTG00005004981) PDYN (ENSPCTG00005005036) ENSPCTG00005005063 TGM3 (ENSPCTG00005005080) SNRPB (ENSPCTG00005005146) TMC2 (ENSPCTG00005005177) NOP56 (ENSPCTG00005005235) IDH3B (ENSPCTG00005005317) ENSPCTG00005005363 EBF4 (ENSPCTG00005005419) ##22 CPXM1 (ENSPCTG00005005508) C20orf141 (ENSPCTG00005005563) TMEM239 (ENSPCTG00005005596) PCED1A (ENSPCTG00005005610) VPS16 (ENSPCTG00005005686) PTPRA (ENSPCTG00005006237) GNRH2 (ENSPCTG00005006488) MRPS26 (ENSPCTG00005006499) OXT (ENSPCTG00005006517) AVP (ENSPCTG00005006538) UBOX5 (ENSPCTG00005006561) FASTKD5 (ENSPCTG00005006610) LZTS3 (ENSPCTG00005006628) ENSPCTG00005006690 ENSPCTG00005006755 Blue whale MODERN SPECIES 6 ENSBMSG00010012953 NSFL1C (ENSBMSG00010012968) SIRPB2 (ENSBMSG00010012984) ENSBMSG00010012990 ENSBMSG00010013000 ENSBMSG00010013011 ENSBMSG00010013028 ENSBMSG00010013070 PDYN (ENSBMSG00010013088) STK35 (ENSBMSG00010013095) TGM3 (ENSBMSG00010013123) SNRPB (ENSBMSG00010013187) TMC2 (ENSBMSG00010013208) NOP56 (ENSBMSG00010013233) IDH3B (ENSBMSG00010013275) EBF4 (ENSBMSG00010013317) ##22 CPXM1 (ENSBMSG00010013401) C20orf141 (ENSBMSG00010013410) TMEM239 (ENSBMSG00010013415) PCED1A (ENSBMSG00010013426) VPS16 (ENSBMSG00010013463) PTPRA (ENSBMSG00010013508) GNRH2 (ENSBMSG00010013554) MRPS26 (ENSBMSG00010013566) ENSBMSG00010013571 AVP (ENSBMSG00010013576) UBOX5 (ENSBMSG00010013585) FASTKD5 (ENSBMSG00010013597) LZTS3 (ENSBMSG00010013607) DDRGK1 (ENSBMSG00010013620) ITPA (ENSBMSG00010013636) Pecora ANCESTRAL SPECIES 9 ENSGT00940000160661 ENSGT00940000163127 ENSGT00940000156364 ENSGT00950000183032.A.b.b.b ENSGT00960000186656.a.a.a.a.a.a.a.h ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.a.a.g ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Yarkand deer MODERN SPECIES 15 PCMTD2 (ENSCHYG00000017351) ENSCHYG00000017221 ENSCHYG00000017151 ENSCHYG00000017131 ENSCHYG00000016987 PDYN (ENSCHYG00000016917) STK35 (ENSCHYG00000016840) TGM3 (ENSCHYG00000016615) ENSCHYG00000016577 TGM6 (ENSCHYG00000016358) SNRPB (ENSCHYG00000016280) ENSCHYG00000016253 TMC2 (ENSCHYG00000015951) NOP56 (ENSCHYG00000015519) IDH3B (ENSCHYG00000015279) EBF4 (ENSCHYG00000014974) ##22 CPXM1 (ENSCHYG00000014740) C20orf141 (ENSCHYG00000014683) TMEM239 (ENSCHYG00000014665) PCED1A (ENSCHYG00000014552) VPS16 (ENSCHYG00000014323) ENSCHYG00000014257 PTPRA (ENSCHYG00000013796) ENSCHYG00000013723 MRPS26 (ENSCHYG00000013692) ENSCHYG00000025665 AVP (ENSCHYG00000025643) UBOX5 (ENSCHYG00000025607) LZTS3 (ENSCHYG00000025572) DDRGK1 (ENSCHYG00000025512) ENSCHYG00000025430 Percora_a ANCESTRAL SPECIES 10 ENSGT00940000163127 ENSGT00940000156364 ENSGT00950000183032.A.b.b.b ENSGT00390000013968 ENSGT00960000186656.a.a.a.a.a.a.a.h ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.a.a.g ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT01100000265926 ENSGT01080000258042 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b Siberian musk deer MODERN SPECIES 1193 PCMTD2 (ENSMMSG00000023634) GINS1 (ENSMMSG00000023646) ENSMMSG00000023657 ENSMMSG00000023669 ENSMMSG00000023681 ENSMMSG00000023694 PDYN (ENSMMSG00000023701) STK35 (ENSMMSG00000023704) TGM3 (ENSMMSG00000023710) TGM6 (ENSMMSG00000023719) SNRPB (ENSMMSG00000023733) TMC2 (ENSMMSG00000023743) NOP56 (ENSMMSG00000023757) IDH3B (ENSMMSG00000004870) ENSMMSG00000005067 EBF4 (ENSMMSG00000005104) ##22 CPXM1 (ENSMMSG00000005272) C20orf141 (ENSMMSG00000005330) TMEM239 (ENSMMSG00000005353) PCED1A (ENSMMSG00000005382) VPS16 (ENSMMSG00000005445) PTPRA (ENSMMSG00000005576) ENSMMSG00000005854 ENSMMSG00000005863 MRPS26 (ENSMMSG00000005887) ENSMMSG00000005907 AVP (ENSMMSG00000005924) UBOX5 (ENSMMSG00000005944) LZTS3 (ENSMMSG00000005981) DDRGK1 (ENSMMSG00000006058) ITPA (ENSMMSG00000006082) Bovidae ANCESTRAL SPECIES 10 ENSGT00940000156364 ENSGT00950000183032.A.b.b.b ENSGT00390000013968 ENSGT00960000186656.a.a.a.a.a.a.a.g.b ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.a.a.h ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT01100000265926 ENSGT01080000258042 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b Caprinae ANCESTRAL SPECIES 23 ENSGT00960000186656.a.a.a.a.a.a.a.g.b.e ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000008453.g ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 ENSGT00940000154894 Rambouillet Sheep MODERN SPECIES 4 PCMTD2 (ENSOARG00020009092) GINS1 (ENSOARG00020009057) ENSOARG00020008971 ENSOARG00020008910 ENSOARG00020008858 ENSOARG00020008834 PDYN (ENSOARG00020008816) STK35 (ENSOARG00020008766) TGM3 (ENSOARG00020008614) TGM6 (ENSOARG00020008462) SNRPB (ENSOARG00020008421) TMC2 (ENSOARG00020008221) ENSOARG00020008123 IDH3B (ENSOARG00020008044) ENSOARG00020008013 EBF4 (ENSOARG00020007658) ##22 CPXM1 (ENSOARG00020007610) C20orf141 (ENSOARG00020007585) TMEM239 (ENSOARG00020007567) ENSOARG00020007480 ENSOARG00020007460 ENSOARG00020007094 ENSOARG00020007012 ENSOARG00020006897 VPS16 (ENSOARG00020006312) PTPRA (ENSOARG00020006169) MRPS26 (ENSOARG00020006087) OXT (ENSOARG00020006060) AVP (ENSOARG00020006038) UBOX5 (ENSOARG00020006014) FASTKD5 (ENSOARG00020005990) Goat MODERN SPECIES 4 ENSCHIG00000014141 ENSCHIG00000001274 ENSCHIG00000024563 ENSCHIG00000012593 PDYN (ENSCHIG00000016252) STK35 (ENSCHIG00000012450) TGM3 (ENSCHIG00000027237) TGM6 (ENSCHIG00000021722) ENSCHIG00000023142 ENSCHIG00000013875 SNRPB (ENSCHIG00000025449) TMC2 (ENSCHIG00000020430) NOP56 (ENSCHIG00000023450) IDH3B (ENSCHIG00000011555) ENSCHIG00000022751 EBF4 (ENSCHIG00000010850) ##22 CPXM1 (ENSCHIG00000021212) C20orf141 (ENSCHIG00000010060) TMEM239 (ENSCHIG00000011946) PCED1A (ENSCHIG00000010435) VPS16 (ENSCHIG00000011213) PTPRA (ENSCHIG00000017604) ENSCHIG00000001147 ENSCHIG00000017609 AVP (ENSCHIG00000010500) UBOX5 (ENSCHIG00000011900) FASTKD5 (ENSCHIG00000011596) LZTS3 (ENSCHIG00000015799) DDRGK1 (ENSCHIG00000009311) ITPA (ENSCHIG00000014634) SLC4A11 (ENSCHIG00000016611) Bovinae ANCESTRAL SPECIES 20 ENSGT00940000156364 ENSGT00950000183032.A.b.b.b ENSGT00390000013968 ENSGT00960000186656.a.a.a.a.a.a.a.h ENSGT00960000186656.a.a.a.a.a.a.b ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.a.a.g.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT01100000265926 ENSGT01080000258042 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b American bison MODERN SPECIES 2997 ENSBBBG00000009069 ENSBBBG00000018748 ENSBBBG00000018760 ENSBBBG00000018771 ENSBBBG00000018780 PDYN (ENSBBBG00000004720) STK35 (ENSBBBG00000018792) ENSBBBG00000018799 TGM3 (ENSBBBG00000018830) TGM6 (ENSBBBG00000018883) SNRPB (ENSBBBG00000018900) TMC2 (ENSBBBG00000004790) NOP56 (ENSBBBG00000018939) IDH3B (ENSBBBG00000008165) ENSBBBG00000004829 ENSBBBG00000018986 ##22 CPXM1 (ENSBBBG00000019000) C20orf141 (ENSBBBG00000019008) TMEM239 (ENSBBBG00000004850) PCED1A (ENSBBBG00000019029) VPS16 (ENSBBBG00000019093) PTPRA (ENSBBBG00000019230) GNRH2 (ENSBBBG00000019247) MRPS26 (ENSBBBG00000019255) ENSBBBG00000019257 UBOX5 (ENSBBBG00000004987) FASTKD5 (ENSBBBG00000019270) LZTS3 (ENSBBBG00000019286) DDRGK1 (ENSBBBG00000005001) ITPA (ENSBBBG00000008358) SLC4A11 (ENSBBBG00000019388) Bos ANCESTRAL SPECIES 22 ENSGT00940000156364 ENSGT00950000183032.A.b.b.b ENSGT00390000013968.e ENSGT00960000186656.a.a.a.a.a.a.a.h.a ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.a.a.g.b.d ENSGT00960000186656.a.a.a.a.a.a.a.g.b.c.a ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT01100000265926 ENSGT01080000258042 ENSGT00390000008453 ENSGT01100000263481.n.a.b.a.b.b.a.b.a.a.b.a.b.a ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b Bos_b ANCESTRAL SPECIES 4 ENSGT00390000013968.e ENSGT00440000033805.g ENSGT00940000159424.n.a ENSGT00960000186656.a.a.a.a.a.a.a.h.a ENSGT00960000186656.a.a.a.a.a.a.a.h.b ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.a.a.g.b.d ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT01100000265926 ENSGT01080000258042 ENSGT00390000008453 ENSGT01100000263481.n.a.b.a.b.b.a.b.a.a.b.a.b.a ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b Hybrid Bos Indicus MODERN SPECIES 4 ENSBIXG00005017583 ENSBIXG00005017565 ENSBIXG00005005849 ENSBIXG00005017530 ENSBIXG00005017502 ENSBIXG00005017455 PDYN (ENSBIXG00005017405) STK35 (ENSBIXG00005017349) TGM3 (ENSBIXG00005017324) TGM6 (ENSBIXG00005017267) SNRPB (ENSBIXG00005017162) TMC2 (ENSBIXG00005017128) NOP56 (ENSBIXG00005005732) IDH3B (ENSBIXG00005017044) ENSBIXG00005016971 EBF4 (ENSBIXG00005002747) ##22 CPXM1 (ENSBIXG00005016591) C20orf141 (ENSBIXG00005016567) TMEM239 (ENSBIXG00005016548) PCED1A (ENSBIXG00005007034) VPS16 (ENSBIXG00005016496) PTPRA (ENSBIXG00005016390) ENSBIXG00005016349 ENSBIXG00005016326 MRPS26 (ENSBIXG00005016270) ENSBIXG00005006570 ENSBIXG00005016246 AVP (ENSBIXG00005016214) UBOX5 (ENSBIXG00005016186) FASTKD5 (ENSBIXG00005016144) LZTS3 (ENSBIXG00005016113) Cow MODERN SPECIES 4 ENSBTAG00000011638 ENSBTAG00000054594 SIRPB1 (ENSBTAG00000039520) ENSBTAG00000051981 ENSBTAG00000048087 SIRPA (ENSBTAG00000007213) PDYN (ENSBTAG00000045520) STK35 (ENSBTAG00000003561) TGM3 (ENSBTAG00000001785) TGM6 (ENSBTAG00000037464) SNRPB (ENSBTAG00000001038) TMC2 (ENSBTAG00000018811) NOP56 (ENSBTAG00000018812) IDH3B (ENSBTAG00000018813) ENSBTAG00000052166 EBF4 (ENSBTAG00000037757) ##22 ENSBTAG00000050499 CPXM1 (ENSBTAG00000011458) C13H20orf141 (ENSBTAG00000021817) TMEM239 (ENSBTAG00000021816) PCED1A (ENSBTAG00000003863) VPS16 (ENSBTAG00000001320) ENSBTAG00000048414 PTPRA (ENSBTAG00000011425) GNRH2 (ENSBTAG00000049511) MRPS26 (ENSBTAG00000000825) OXT (ENSBTAG00000008026) AVP (ENSBTAG00000008027) FASTKD5 (ENSBTAG00000051021) UBOX5 (ENSBTAG00000015379) LZTS3 (ENSBTAG00000020454) Bos_a ANCESTRAL SPECIES 7 ENSGT00940000163127 ENSGT00940000156364 ENSGT00950000183032.A.b.b.b ENSGT00390000013968.e ENSGT00960000186656.a.a.a.a.a.a.a.h.a ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.a.a.g.b.c.a ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT01080000258042 ENSGT00390000005119 ENSGT00390000008453 ENSGT01100000263481.n.a.b.a.b.b.a.b.a.a.b.a.b.a ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT01030000234607.A.a.b.b ENSGT00510000049555 ENSGT00940000154078.b Domestic yak MODERN SPECIES 3 PCMTD2 (ENSBGRG00000011787) ENSBGRG00000011646 ENSBGRG00000011162 ENSBGRG00000011070 ENSBGRG00000011028 ENSBGRG00000010717 PDYN (ENSBGRG00000010593) STK35 (ENSBGRG00000016079) TGM3 (ENSBGRG00000015833) TGM6 (ENSBGRG00000015301) SNRPB (ENSBGRG00000014997) TMC2 (ENSBGRG00000014696) NOP56 (ENSBGRG00000014581) IDH3B (ENSBGRG00000014361) ENSBGRG00000014313 EBF4 (ENSBGRG00000013966) ##22 CPXM1 (ENSBGRG00000013785) C20orf141 (ENSBGRG00000013721) TMEM239 (ENSBGRG00000013692) PCED1A (ENSBGRG00000013633) VPS16 (ENSBGRG00000013110) PTPRA (ENSBGRG00000012527) ENSBGRG00000012443 GNRH2 (ENSBGRG00000012403) MRPS26 (ENSBGRG00000012344) ENSBGRG00000012319 ENSBGRG00000012264 AVP (ENSBGRG00000012208) FASTKD5 (ENSBGRG00000012156) UBOX5 (ENSBGRG00000012095) LZTS3 (ENSBGRG00000011995) Wild yak DUPLICATION Wild yak MODERN SPECIES 619 ENSBMUG00000019812 NOP56 (ENSBMUG00000019823) IDH3B (ENSBMUG00000019865) ENSBMUG00000019875 EBF4 (ENSBMUG00000019908) ##22 ENSBMUG00000019937 ##22 CPXM1 (ENSBMUG00000019952) C20orf141 (ENSBMUG00000019955) TMEM239 (ENSBMUG00000019961) PCED1A (ENSBMUG00000019999) VPS16 (ENSBMUG00000020060) PTPRA (ENSBMUG00000020156) ENSBMUG00000020206 MRPS26 (ENSBMUG00000020209) UBOX5 (ENSBMUG00000020233) LZTS3 (ENSBMUG00000020278) DDRGK1 (ENSBMUG00000020325) ITPA (ENSBMUG00000020353) SLC4A11 (ENSBMUG00000020486) DNAAF9 (ENSBMUG00000020518) Wild yak MODERN SPECIES 619 ENSBMUG00000019812 NOP56 (ENSBMUG00000019823) IDH3B (ENSBMUG00000019865) ENSBMUG00000019875 EBF4 (ENSBMUG00000019908) ##22 ENSBMUG00000019937 ##22 CPXM1 (ENSBMUG00000019952) C20orf141 (ENSBMUG00000019955) TMEM239 (ENSBMUG00000019961) PCED1A (ENSBMUG00000019999) VPS16 (ENSBMUG00000020060) PTPRA (ENSBMUG00000020156) ENSBMUG00000020206 MRPS26 (ENSBMUG00000020209) UBOX5 (ENSBMUG00000020233) LZTS3 (ENSBMUG00000020278) DDRGK1 (ENSBMUG00000020325) ITPA (ENSBMUG00000020353) SLC4A11 (ENSBMUG00000020486) DNAAF9 (ENSBMUG00000020518) ATRN (ENSBMUG00000020552) Laurasiatheria_b ANCESTRAL SPECIES 19 ENSGT00960000186656.a.b ENSGT00960000186656.a.a.a.b ENSGT00960000186656.a.a.b ENSGT00960000186656.a.a.a.a.a.b.h ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.g.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Laurasiatheria_c ANCESTRAL SPECIES 17 ENSGT00940000153311.a.b.a ENSGT00520000055567.a.a.a ENSGT00960000186656.a.b ENSGT00960000186656.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.g.a ENSGT00960000186656.a.a.a.a.a.b.g.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Equus ANCESTRAL SPECIES 8 ENSGT00960000186656.a.b ENSGT00960000186656.a.a.a.b.b ENSGT00960000186656.a.a.a.a.a.b.g.a.b ENSGT00960000186656.a.a.a.a.a.b.g.a.a.a ENSGT00960000186656.a.a.a.b.a ENSGT00960000186656.a.a.a.a.a.b.g.a.a.b ENSGT00960000186656.a.a.a.a.a.b.g.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 ENSGT00940000154894 ENSGT00390000003692 Donkey MODERN SPECIES 6 ENSEASG00005012972 ENSEASG00005024464 ENSEASG00005003520 ENSEASG00005027707 ENSEASG00005037192 ENSEASG00005028952 ENSEASG00005025587 PDYN (ENSEASG00005012975) STK35 (ENSEASG00005012978) TGM3 (ENSEASG00005012987) TGM6 (ENSEASG00005012990) SNRPB (ENSEASG00005012991) TMC2 (ENSEASG00005012994) NOP56 (ENSEASG00005012996) IDH3B (ENSEASG00005013006) EBF4 (ENSEASG00005013009) ##22 CPXM1 (ENSEASG00005013012) ENSEASG00005024670 PCED1A (ENSEASG00005013018) VPS16 (ENSEASG00005013020) PTPRA (ENSEASG00005013026) GNRH2 (ENSEASG00005013029) MRPS26 (ENSEASG00005013030) ENSEASG00005031053 AVP (ENSEASG00005013032) UBOX5 (ENSEASG00005013034) FASTKD5 (ENSEASG00005033287) LZTS3 (ENSEASG00005013035) DDRGK1 (ENSEASG00005013036) ITPA (ENSEASG00005000029) SLC4A11 (ENSEASG00005000065) Horse MODERN SPECIES 14 SIRPB2 (ENSECAG00000002438) ENSECAG00000055343 ENSECAG00000056164 ENSECAG00000030891 ENSECAG00000048281 ENSECAG00000010990 ENSECAG00000035431 PDYN (ENSECAG00000007241) STK35 (ENSECAG00000057233) TGM3 (ENSECAG00000023860) TGM6 (ENSECAG00000019808) SNRPB (ENSECAG00000011944) TMC2 (ENSECAG00000010161) NOP56 (ENSECAG00000021299) IDH3B (ENSECAG00000000261) EBF4 (ENSECAG00000010003) ##22 CPXM1 (ENSECAG00000021019) TMEM239 (ENSECAG00000021010) PCED1A (ENSECAG00000016497) VPS16 (ENSECAG00000013499) PTPRA (ENSECAG00000010855) GNRH2 (ENSECAG00000039220) MRPS26 (ENSECAG00000008620) OXT (ENSECAG00000034091) AVP (ENSECAG00000024857) UBOX5 (ENSECAG00000024708) FASTKD5 (ENSECAG00000005271) LZTS3 (ENSECAG00000024058) DDRGK1 (ENSECAG00000020284) SLC4A11 (ENSECAG00000020277) ITPA (ENSECAG00000014049) Chiroptera ANCESTRAL SPECIES 7 ENSGT00940000153311.a.b.a ENSGT00520000055567.a.a.a ENSGT00960000186656.a.b ENSGT00960000186656.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.h ENSGT00960000186656.a.a.a.a.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 ENSGT00940000154894 Megabat MODERN SPECIES 3538 EBF4 (ENSPVAG00000006830) ##22 CPXM1 (ENSPVAG00000006831) ENSPVAG00000006832 PCED1A (ENSPVAG00000006834) VPS16 (ENSPVAG00000006835) PTPRA (ENSPVAG00000006836) MRPS26 (ENSPVAG00000006837) Microchiroptera ANCESTRAL SPECIES 6 ENSGT00940000153311.a.b.a ENSGT00520000055567.a.a.a ENSGT00960000186656.a.b ENSGT00960000186656.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.h ENSGT00960000186656.a.a.a.a.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 ENSGT00940000154894 Greater horseshoe bat MODERN SPECIES 15 ENSRFEG00010012485 ENSRFEG00010012547 ENSRFEG00010012747 ENSRFEG00010012792 ENSRFEG00010012879 PDYN (ENSRFEG00010012936) STK35 (ENSRFEG00010012984) ENSRFEG00010013050 TGM3 (ENSRFEG00010013066) TGM6 (ENSRFEG00010013296) SNRPB (ENSRFEG00010013715) ZNF343 (ENSRFEG00010013775) TMC2 (ENSRFEG00010014001) NOP56 (ENSRFEG00010014305) IDH3B (ENSRFEG00010014373) EBF4 (ENSRFEG00010014520) ##22 ENSRFEG00010014940 CPXM1 (ENSRFEG00010014994) C20orf141 (ENSRFEG00010015227) TMEM239 (ENSRFEG00010015315) PCED1A (ENSRFEG00010015334) VPS16 (ENSRFEG00010015404) PTPRA (ENSRFEG00010015537) MRPS26 (ENSRFEG00010015697) ENSRFEG00010015751 AVP (ENSRFEG00010015809) UBOX5 (ENSRFEG00010015870) FASTKD5 (ENSRFEG00010015928) LZTS3 (ENSRFEG00010015945) DDRGK1 (ENSRFEG00010016047) ITPA (ENSRFEG00010016192) Microbat MODERN SPECIES 1115 ENSMLUG00000030507 TGM6 (ENSMLUG00000016945) SNRPB (ENSMLUG00000016951) ENSMLUG00000027258 TMC2 (ENSMLUG00000023589) NOP56 (ENSMLUG00000027085) IDH3B (ENSMLUG00000008193) EBF4 (ENSMLUG00000023832) ##22 CPXM1 (ENSMLUG00000002715) TMEM239 (ENSMLUG00000002712) PCED1A (ENSMLUG00000028662) VPS16 (ENSMLUG00000016651) PTPRA (ENSMLUG00000029093) UBOX5 (ENSMLUG00000025497) FASTKD5 (ENSMLUG00000000343) LZTS3 (ENSMLUG00000000347) DDRGK1 (ENSMLUG00000000352) ITPA (ENSMLUG00000000358) SLC4A11 (ENSMLUG00000000362) DNAAF9 (ENSMLUG00000000381) ATRN (ENSMLUG00000007943) ENSMLUG00000024610 ADAM33 (ENSMLUG00000008010) Carnivora ANCESTRAL SPECIES 20 ENSGT00520000055567.a.a.a ENSGT00960000186656.a.b ENSGT00960000186656.a.a.b ENSGT00960000186656.a.a.a.a.a.b.h ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.g.b ENSGT00960000186656.a.a.a.a.a.a.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Felidae ANCESTRAL SPECIES 3 ENSGT00940000153311.a.b.a ENSGT00520000055567.a.a.a ENSGT00960000186656.a.b ENSGT00960000186656.a.a.b ENSGT00960000186656.a.a.a.a.a.b.h.a.b ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.h.a.a ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 ENSGT00940000154894 Cat MODERN SPECIES 2 ENSFCAG00000044954 ENSFCAG00000049245 ENSFCAG00000040585 ENSFCAG00000047787 ENSFCAG00000003555 PDYN (ENSFCAG00000032187) STK35 (ENSFCAG00000007974) ENSFCAG00000046430 TGM3 (ENSFCAG00000014443) TGM6 (ENSFCAG00000014445) SNRPB (ENSFCAG00000034090) ENSFCAG00000047871 TMC2 (ENSFCAG00000014449) NOP56 (ENSFCAG00000014450) IDH3B (ENSFCAG00000014452) EBF4 (ENSFCAG00000014453) ##22 PCED1A (ENSFCAG00000002886) CPXM1 (ENSFCAG00000014454) CA3H20orf141 (ENSFCAG00000035021) TMEM239 (ENSFCAG00000034447) VPS16 (ENSFCAG00000001825) PTPRA (ENSFCAG00000019232) ENSFCAG00000034109 MRPS26 (ENSFCAG00000028185) OXT (ENSFCAG00000026996) AVP (ENSFCAG00000046132) UBOX5 (ENSFCAG00000018148) LZTS3 (ENSFCAG00000013412) DDRGK1 (ENSFCAG00000031864) ITPA (ENSFCAG00000040485) SLC4A11 (ENSFCAG00000013416) Panthera ANCESTRAL SPECIES 2 ENSGT00940000153311.a.b.a ENSGT00520000055567.a.a.a ENSGT00960000186656.a.b ENSGT00960000186656.a.a.b ENSGT00960000186656.a.a.a.a.a.b.h.a.b.b ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.h.a.a ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 ENSGT00940000154894 Panthera_a ANCESTRAL SPECIES 1 ENSGT00940000153311.a.b.a ENSGT00520000055567.a.a.a ENSGT00960000186656.a.b ENSGT00960000186656.a.a.b ENSGT00960000186656.a.a.a.a.a.b.h.a.b.b ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.h.a.a ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 ENSGT00940000154894 lion MODERN SPECIES 3 ENSPLOG00000003810 NSFL1C (ENSPLOG00000003733) SIRPB2 (ENSPLOG00000003678) ENSPLOG00000003668 ENSPLOG00000003632 ENSPLOG00000003584 ENSPLOG00000003564 PDYN (ENSPLOG00000003536) STK35 (ENSPLOG00000003522) TGM3 (ENSPLOG00000003495) TGM6 (ENSPLOG00000003443) SNRPB (ENSPLOG00000003398) TMC2 (ENSPLOG00000003363) NOP56 (ENSPLOG00000003299) IDH3B (ENSPLOG00000003273) EBF4 (ENSPLOG00000003192) ##22 CPXM1 (ENSPLOG00000003115) C20orf141 (ENSPLOG00000003091) TMEM239 (ENSPLOG00000003079) PCED1A (ENSPLOG00000003066) VPS16 (ENSPLOG00000002976) PTPRA (ENSPLOG00000002856) ENSPLOG00000002808 MRPS26 (ENSPLOG00000002782) ENSPLOG00000002759 AVP (ENSPLOG00000002739) UBOX5 (ENSPLOG00000002712) LZTS3 (ENSPLOG00000002688) DDRGK1 (ENSPLOG00000002659) ITPA (ENSPLOG00000002614) SLC4A11 (ENSPLOG00000002284) Tiger DUPLICATION Tiger MODERN SPECIES 16 ENSPTIG00000017214 ENSPTIG00000017945 ENSPTIG00000018547 PDYN (ENSPTIG00000021174) STK35 (ENSPTIG00000021726) TGM3 (ENSPTIG00000021860) TGM6 (ENSPTIG00000001417) SNRPB (ENSPTIG00000007468) ENSPTIG00000009343 TMC2 (ENSPTIG00000010266) NOP56 (ENSPTIG00000012828) IDH3B (ENSPTIG00000013758) ENSPTIG00000017740 ##22 ENSPTIG00000018378 ##22 CPXM1 (ENSPTIG00000018562) C20orf141 (ENSPTIG00000019566) TMEM239 (ENSPTIG00000000563) PCED1A (ENSPTIG00000002362) VPS16 (ENSPTIG00000008228) PTPRA (ENSPTIG00000016170) GNRH2 (ENSPTIG00000020224) UBOX5 (ENSPTIG00000021693) LZTS3 (ENSPTIG00000002751) DDRGK1 (ENSPTIG00000006358) ITPA (ENSPTIG00000007338) SLC4A11 (ENSPTIG00000010185) DNAAF9 (ENSPTIG00000015899) ATRN (ENSPTIG00000018935) Tiger MODERN SPECIES 16 ENSPTIG00000017214 ENSPTIG00000017945 ENSPTIG00000018547 PDYN (ENSPTIG00000021174) STK35 (ENSPTIG00000021726) TGM3 (ENSPTIG00000021860) TGM6 (ENSPTIG00000001417) SNRPB (ENSPTIG00000007468) ENSPTIG00000009343 TMC2 (ENSPTIG00000010266) NOP56 (ENSPTIG00000012828) IDH3B (ENSPTIG00000013758) ENSPTIG00000017740 ##22 ENSPTIG00000018378 ##22 CPXM1 (ENSPTIG00000018562) C20orf141 (ENSPTIG00000019566) TMEM239 (ENSPTIG00000000563) PCED1A (ENSPTIG00000002362) VPS16 (ENSPTIG00000008228) PTPRA (ENSPTIG00000016170) GNRH2 (ENSPTIG00000020224) UBOX5 (ENSPTIG00000021693) LZTS3 (ENSPTIG00000002751) DDRGK1 (ENSPTIG00000006358) ITPA (ENSPTIG00000007338) SLC4A11 (ENSPTIG00000010185) DNAAF9 (ENSPTIG00000015899) ATRN (ENSPTIG00000018935) ENSPTIG00000007825 Caniformia ANCESTRAL SPECIES ENSGT00960000186656.a.a.b ENSGT00960000186656.a.a.a.a.a.b.h.c.b ENSGT00960000186656.a.a.a.a.a.b.h.c.a ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.g.b ENSGT00960000186656.a.a.a.a.a.a.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT00950000186116 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Caniformia_b ANCESTRAL SPECIES ENSGT00960000186656.a.b ENSGT00960000186656.a.a.a.b ENSGT00960000186656.a.a.b.d ENSGT00960000186656.a.a.a.a.a.b.h.c.b ENSGT00960000186656.a.a.a.a.a.b.h.c.a ENSGT00960000186656.a.a.a.a.b.a ENSGT00950000183149.B ENSGT00940000158197 ENSGT00950000186116 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Mustelinae ANCESTRAL SPECIES 43 ENSGT00960000186656.a.a.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.g.b ENSGT00960000186656.a.a.a.a.b.b ENSGT00960000186656.a.a.a.a.a.b.h.c.a.b ENSGT00960000186656.a.a.a.a.b.a ENSGT00960000186656.a.a.a.a.a.b.h.c.a.a ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00940000165014 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 American mink MODERN SPECIES 28 ENSNVIG00000000026 ENSNVIG00000020716 ENSNVIG00000020707 ENSNVIG00000020563 ENSNVIG00000020542 ENSNVIG00000020512 PDYN (ENSNVIG00000020504) STK35 (ENSNVIG00000020501) TGM3 (ENSNVIG00000020470) TGM6 (ENSNVIG00000020430) SNRPB (ENSNVIG00000020410) ENSNVIG00000020401 TMC2 (ENSNVIG00000020370) NOP56 (ENSNVIG00000020275) IDH3B (ENSNVIG00000020233) EBF4 (ENSNVIG00000020146) ##22 CPXM1 (ENSNVIG00000020136) ENSNVIG00000020124 TMEM239 (ENSNVIG00000020119) F113A (ENSNVIG00000020089) VPS16 (ENSNVIG00000020048) PTPRA (ENSNVIG00000019955) GNRH2 (ENSNVIG00000019917) MRPS26 (ENSNVIG00000019909) ENSNVIG00000019896 RNF37 (ENSNVIG00000019886) FASTKD5 (ENSNVIG00000019883) LZTS3 (ENSNVIG00000019842) DDRGK1 (ENSNVIG00000019833) ITPA (ENSNVIG00000019784) SLC4A11 (ENSNVIG00000019720) Ferret MODERN SPECIES 337 ENSMPUG00000009591 ENSMPUG00000009580 ENSMPUG00000009575 ENSMPUG00000009561 PDYN (ENSMPUG00000009541) ENSMPUG00000009532 STK35 (ENSMPUG00000009523) TGM3 (ENSMPUG00000009511) TGM6 (ENSMPUG00000009294) SNRPB (ENSMPUG00000009283) ENSMPUG00000019147 TMC2 (ENSMPUG00000009125) NOP56 (ENSMPUG00000009118) ENSMPUG00000009107 EBF4 (ENSMPUG00000009093) ##22 CPXM1 (ENSMPUG00000009076) TMEM239 (ENSMPUG00000009071) PCED1A (ENSMPUG00000009061) VPS16 (ENSMPUG00000009037) PTPRA (ENSMPUG00000009021) MRPS26 (ENSMPUG00000009018) ENSMPUG00000009014 ENSMPUG00000008974 AVP (ENSMPUG00000008942) UBOX5 (ENSMPUG00000008899) FASTKD5 (ENSMPUG00000019143) LZTS3 (ENSMPUG00000008889) DDRGK1 (ENSMPUG00000008881) ITPA (ENSMPUG00000008868) SLC4A11 (ENSMPUG00000008860) Ursidae ANCESTRAL SPECIES 14 ENSGT00960000186656.a.a.a.b ENSGT00960000186656.a.a.b.d ENSGT00960000186656.a.a.b.c ENSGT00960000186656.a.a.a.a.a.b.h.c.b ENSGT00960000186656.a.a.a.a.a.b.h.c.a ENSGT00960000186656.a.a.a.a.b.a ENSGT00950000183149.B ENSGT00940000158197 ENSGT00950000186116 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 ENSGT00940000154894 Giant Panda DUPLICATION Giant Panda MODERN SPECIES 4 ENSAMEG00000027402 ENSAMEG00000024682 ENSAMEG00000003676 ENSAMEG00000030677 ENSAMEG00000011475 PDYN (ENSAMEG00000026821) STK35 (ENSAMEG00000011461) ENSAMEG00000026776 TGM3 (ENSAMEG00000011440) TGM6 (ENSAMEG00000011376) SNRPB (ENSAMEG00000011353) TMC2 (ENSAMEG00000011324) NOP56 (ENSAMEG00000011299) IDH3B (ENSAMEG00000011240) ENSAMEG00000011229 ##22 ENSAMEG00000011228 ##22 CPXM1 (ENSAMEG00000011199) C20orf141 (ENSAMEG00000027335) TMEM239 (ENSAMEG00000011193) VPS16 (ENSAMEG00000011129) PTPRA (ENSAMEG00000011086) GNRH2 (ENSAMEG00000028228) MRPS26 (ENSAMEG00000011078) AVP (ENSAMEG00000024796) UBOX5 (ENSAMEG00000011065) LZTS3 (ENSAMEG00000028727) DDRGK1 (ENSAMEG00000011041) ITPA (ENSAMEG00000011021) DNAAF9 (ENSAMEG00000010967) ATRN (ENSAMEG00000010900) ENSAMEG00000010895 Giant Panda MODERN SPECIES 4 NSFL1C (ENSAMEG00000000340) ENSAMEG00000027402 ENSAMEG00000024682 ENSAMEG00000003676 ENSAMEG00000030677 ENSAMEG00000011475 PDYN (ENSAMEG00000026821) STK35 (ENSAMEG00000011461) ENSAMEG00000026776 TGM3 (ENSAMEG00000011440) TGM6 (ENSAMEG00000011376) SNRPB (ENSAMEG00000011353) TMC2 (ENSAMEG00000011324) NOP56 (ENSAMEG00000011299) IDH3B (ENSAMEG00000011240) ENSAMEG00000011229 ##22 ENSAMEG00000011228 ##22 CPXM1 (ENSAMEG00000011199) C20orf141 (ENSAMEG00000027335) TMEM239 (ENSAMEG00000011193) VPS16 (ENSAMEG00000011129) PTPRA (ENSAMEG00000011086) GNRH2 (ENSAMEG00000028228) MRPS26 (ENSAMEG00000011078) AVP (ENSAMEG00000024796) UBOX5 (ENSAMEG00000011065) LZTS3 (ENSAMEG00000028727) DDRGK1 (ENSAMEG00000011041) ITPA (ENSAMEG00000011021) DNAAF9 (ENSAMEG00000010967) ATRN (ENSAMEG00000010900) Ursus ANCESTRAL SPECIES 1 ENSGT00960000186656.a.a.b.d ENSGT00960000186656.a.a.b.c ENSGT00960000186656.a.a.a.a.a.b.h.c.b ENSGT00960000186656.a.a.a.a.a.b.h.c.a.f.a ENSGT00960000186656.a.a.a.a.a.b.h.c.a.e ENSGT00950000183149.B ENSGT00940000158197 ENSGT00950000186116 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.b.b.d ENSGT01050000244942.b.a.b ENSGT01090000261283 ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000008453 ENSGT00390000005119 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Polar bear MODERN SPECIES 253 ENSUMAG00000001498 ENSUMAG00000001528 ENSUMAG00000001553 ENSUMAG00000001733 ENSUMAG00000001755 PDYN (ENSUMAG00000001872) STK35 (ENSUMAG00000001890) ENSUMAG00000001909 TGM3 (ENSUMAG00000001931) TGM6 (ENSUMAG00000002015) ENSUMAG00000002123 TMC2 (ENSUMAG00000002135) ENSUMAG00000002153 NOP56 (ENSUMAG00000002172) IDH3B (ENSUMAG00000002379) ENSUMAG00000002395 ##22 CPXM1 (ENSUMAG00000002402) C20orf141 (ENSUMAG00000002405) PCED1A (ENSUMAG00000002408) VPS16 (ENSUMAG00000002471) PTPRA (ENSUMAG00000002744) MRPS26 (ENSUMAG00000002754) GNRH2 (ENSUMAG00000002757) UBOX5 (ENSUMAG00000002762) FASTKD5 (ENSUMAG00000002765) DDRGK1 (ENSUMAG00000002775) ITPA (ENSUMAG00000002783) DNAAF9 (ENSUMAG00000002804) ATRN (ENSUMAG00000003024) ADAM33 (ENSUMAG00000003732) SIGLEC1 (ENSUMAG00000003800) American black bear DUPLICATION American black bear MODERN SPECIES 1118 TGM6 (ENSUAMG00000005979) ENSUAMG00000005984 TMC2 (ENSUAMG00000005992) ENSUAMG00000006007 NOP56 (ENSUAMG00000006010) IDH3B (ENSUAMG00000006031) ENSUAMG00000006041 ##22 ENSUAMG00000006047 ##22 CPXM1 (ENSUAMG00000006052) C20orf141 (ENSUAMG00000006058) TMEM239 (ENSUAMG00000006060) PCED1A (ENSUAMG00000006062) VPS16 (ENSUAMG00000006066) American black bear MODERN SPECIES 1118 TGM6 (ENSUAMG00000005979) ENSUAMG00000005984 TMC2 (ENSUAMG00000005992) ENSUAMG00000006007 NOP56 (ENSUAMG00000006010) IDH3B (ENSUAMG00000006031) ENSUAMG00000006041 ##22 ENSUAMG00000006047 ##22 CPXM1 (ENSUAMG00000006052) C20orf141 (ENSUAMG00000006058) TMEM239 (ENSUAMG00000006060) PCED1A (ENSUAMG00000006062) VPS16 (ENSUAMG00000006066) Canidae ANCESTRAL SPECIES 19 ENSGT00960000186656.a.a.a.b ENSGT00960000186656.a.a.b ENSGT00960000186656.a.a.a.a.a.b.h.c.b ENSGT00960000186656.a.a.a.a.a.b.h.c.a.h ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.h.c.a.g ENSGT00950000183149.B ENSGT00940000158197 ENSGT00950000186116 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b.o ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Red fox DUPLICATION Red fox MODERN SPECIES 91 ENSVVUG00000025730 ENSVVUG00000025721 ENSVVUG00000025706 PDYN (ENSVVUG00000025702) STK35 (ENSVVUG00000025697) ENSVVUG00000025696 TGM3 (ENSVVUG00000025669) TGM6 (ENSVVUG00000025656) SNRPB (ENSVVUG00000025654) TMC2 (ENSVVUG00000025649) NOP56 (ENSVVUG00000025634) IDH3B (ENSVVUG00000025632) ENSVVUG00000025627 ##22 ENSVVUG00000025619 ##22 CPXM1 (ENSVVUG00000025457) CUNH20orf141 (ENSVVUG00000025444) TMEM239 (ENSVVUG00000025442) PCED1A (ENSVVUG00000025441) VPS16 (ENSVVUG00000025438) PTPRA (ENSVVUG00000025437) GNRH2 (ENSVVUG00000025436) MRPS26 (ENSVVUG00000025435) ENSVVUG00000025434 UBOX5 (ENSVVUG00000025433) FASTKD5 (ENSVVUG00000025432) LZTS3 (ENSVVUG00000025431) ENSVVUG00000025428 ITPA (ENSVVUG00000025426) SLC4A11 (ENSVVUG00000025179) Red fox MODERN SPECIES 91 ENSVVUG00000025730 ENSVVUG00000025721 ENSVVUG00000025706 PDYN (ENSVVUG00000025702) STK35 (ENSVVUG00000025697) ENSVVUG00000025696 TGM3 (ENSVVUG00000025669) TGM6 (ENSVVUG00000025656) SNRPB (ENSVVUG00000025654) TMC2 (ENSVVUG00000025649) NOP56 (ENSVVUG00000025634) IDH3B (ENSVVUG00000025632) ENSVVUG00000025627 ##22 ENSVVUG00000025619 ##22 CPXM1 (ENSVVUG00000025457) CUNH20orf141 (ENSVVUG00000025444) TMEM239 (ENSVVUG00000025442) PCED1A (ENSVVUG00000025441) VPS16 (ENSVVUG00000025438) PTPRA (ENSVVUG00000025437) GNRH2 (ENSVVUG00000025436) MRPS26 (ENSVVUG00000025435) ENSVVUG00000025434 UBOX5 (ENSVVUG00000025433) FASTKD5 (ENSVVUG00000025432) LZTS3 (ENSVVUG00000025431) ENSVVUG00000025428 ITPA (ENSVVUG00000025426) Canis_lupus ANCESTRAL SPECIES 13 ENSGT00960000186656.a.a.a.a.a.b.h.c.b ENSGT00960000186656.a.a.a.a.a.b.g.b ENSGT00960000186656.a.a.a.a.a.b.h.c.a.h.a ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.h.c.a.g ENSGT00950000183149.B ENSGT00940000158197 ENSGT00950000186116 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.b.b.d ENSGT01090000261283 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b.o ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 ENSGT00940000154894 ENSGT00390000003692 Dog MODERN SPECIES 16 ENSCAFG00845018616 ENSCAFG00845018514 ENSCAFG00845018352 ENSCAFG00845017978 ENSCAFG00845017650 ENSCAFG00845017411 PDYN (ENSCAFG00845017332) ENSCAFG00845017308 TGM3 (ENSCAFG00845017154) TGM6 (ENSCAFG00845016987) SNRPB (ENSCAFG00845016780) ENSCAFG00845016737 TMC2 (ENSCAFG00845016638) NOP56 (ENSCAFG00845016469) IDH3B (ENSCAFG00845016410) EBF4 (ENSCAFG00845015997) ##22 CPXM1 (ENSCAFG00845015888) C20orf141 (ENSCAFG00845015857) TMEM239 (ENSCAFG00845015828) PCED1A (ENSCAFG00845015805) VPS16 (ENSCAFG00845015734) ENSCAFG00845015669 PTPRA (ENSCAFG00845015505) MRPS26 (ENSCAFG00845015407) OXT (ENSCAFG00845015382) AVP (ENSCAFG00845015347) UBOX5 (ENSCAFG00845015301) LZTS3 (ENSCAFG00845015258) DDRGK1 (ENSCAFG00845015196) ITPA (ENSCAFG00845015147) SLC4A11 (ENSCAFG00845015025) Dingo DUPLICATION Dingo MODERN SPECIES 343 ENSCAFG00020003795 ENSCAFG00020003700 ENSCAFG00020003695 ENSCAFG00020003682 PDYN (ENSCAFG00020003677) STK35 (ENSCAFG00020003672) ENSCAFG00020003667 TGM3 (ENSCAFG00020003662) TGM6 (ENSCAFG00020003643) ENSCAFG00020003638 ENSCAFG00020003620 TMC2 (ENSCAFG00020003606) NOP56 (ENSCAFG00020003577) IDH3B (ENSCAFG00020003553) ENSCAFG00020003549 ##22 ENSCAFG00020003540 ##22 CPXM1 (ENSCAFG00020003259) C20orf141 (ENSCAFG00020003242) TMEM239 (ENSCAFG00020003241) PCED1A (ENSCAFG00020003234) VPS16 (ENSCAFG00020003216) PTPRA (ENSCAFG00020003204) MRPS26 (ENSCAFG00020003198) ENSCAFG00020003193 AVP (ENSCAFG00020003184) UBOX5 (ENSCAFG00020003178) LZTS3 (ENSCAFG00020003176) DDRGK1 (ENSCAFG00020003173) ENSCAFG00020003168 SLC4A11 (ENSCAFG00020003100) DNAAF9 (ENSCAFG00020002711) Dingo MODERN SPECIES 343 ENSCAFG00020003841 ENSCAFG00020003795 ENSCAFG00020003700 ENSCAFG00020003695 ENSCAFG00020003682 PDYN (ENSCAFG00020003677) STK35 (ENSCAFG00020003672) ENSCAFG00020003667 TGM3 (ENSCAFG00020003662) TGM6 (ENSCAFG00020003643) ENSCAFG00020003638 ENSCAFG00020003620 TMC2 (ENSCAFG00020003606) NOP56 (ENSCAFG00020003577) IDH3B (ENSCAFG00020003553) ENSCAFG00020003549 ##22 ENSCAFG00020003540 ##22 CPXM1 (ENSCAFG00020003259) C20orf141 (ENSCAFG00020003242) TMEM239 (ENSCAFG00020003241) PCED1A (ENSCAFG00020003234) VPS16 (ENSCAFG00020003216) PTPRA (ENSCAFG00020003204) MRPS26 (ENSCAFG00020003198) ENSCAFG00020003193 AVP (ENSCAFG00020003184) UBOX5 (ENSCAFG00020003178) LZTS3 (ENSCAFG00020003176) DDRGK1 (ENSCAFG00020003173) ENSCAFG00020003168 SLC4A11 (ENSCAFG00020003100) Euarchontoglires ANCESTRAL SPECIES 17 ENSGT00520000055567.a.a.a ENSGT00960000186656.a.b ENSGT00960000186656.a.a.b ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b ENSGT00960000186656.a.a.a.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Euarchontoglires_A ANCESTRAL SPECIES 16 ENSGT00530000063880.a ENSGT00490000044517 ENSGT00940000161638 ENSGT00520000055634.b ENSGT00940000161179 ENSGT00940000164901 ENSGT00940000171162 ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Glires ANCESTRAL SPECIES 17 ENSGT00940000161179 ENSGT00940000153311.a.b.a ENSGT00520000055567.a.a.a ENSGT00960000186656.a.b ENSGT00960000186656.a.a.a.b ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Rodentia ANCESTRAL SPECIES 18 ENSGT00940000153311.a.b.a ENSGT00520000055567.a.a.a ENSGT00960000186656.a.b ENSGT00960000186656.a.a.a.b ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b ENSGT00940000171162 ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Rodentia_B ANCESTRAL SPECIES 13 ENSGT00940000161638 ENSGT00520000055634.b ENSGT00940000161179 ENSGT00940000153311.a.b.a ENSGT00520000055567.a.a.a ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00940000165014 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Kangaroo rat MODERN SPECIES 332 Snph (ENSDORG00000013024) Sdcbp2 (ENSDORG00000013027) ENSDORG00000026774 Nsfl1c (ENSDORG00000013031) ENSDORG00000006225 ENSDORG00000006937 Pdyn (ENSDORG00000027024) Stk35 (ENSDORG00000006763) Tgm3 (ENSDORG00000027920) Tgm6 (ENSDORG00000006504) Snrpb (ENSDORG00000029558) Tmc2 (ENSDORG00000013570) ENSDORG00000013918 ENSDORG00000024850 Idh3b (ENSDORG00000013913) Ebf4 (ENSDORG00000004139) ##22 Cpxm1 (ENSDORG00000003235) 1700020A23Rik (ENSDORG00000027106) Tmem239 (ENSDORG00000001749) Pced1a (ENSDORG00000027465) Vps16 (ENSDORG00000023158) Ptpra (ENSDORG00000012895) Mrps26 (ENSDORG00000012900) Oxt (ENSDORG00000024438) Avp (ENSDORG00000026916) Fastkd5 (ENSDORG00000029181) Ubox5 (ENSDORG00000023223) Lzts3 (ENSDORG00000023886) Ddrgk1 (ENSDORG00000025128) Itpa (ENSDORG00000016219) Slc4a11 (ENSDORG00000016220) Myomorpha ANCESTRAL SPECIES 9 ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00940000165014 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Muroidea ANCESTRAL SPECIES 7 ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00940000165014 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Muroidea_A ANCESTRAL SPECIES 2 ENSGT00390000007919 ENSGT00390000014879.c.a ENSGT00530000063691.a ENSGT00390000013353 ENSGT00950000182943.jb ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.eb ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00940000165014 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Cricetidae ANCESTRAL SPECIES 5 ENSGT00390000007919 ENSGT00390000014879.c.a ENSGT00530000063691.a ENSGT00390000013353 ENSGT00950000182943.jb ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.eb ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00940000165014 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Cricetinae ANCESTRAL SPECIES 1 ENSGT00390000014879.c.a ENSGT00530000063691.a ENSGT00390000013353 ENSGT00950000182943.jb ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.eb ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT00940000155052.e.b.b ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00940000165014 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000008453 ENSGT00390000004511.d.b ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Chinese hamster chok1gshd MODERN SPECIES 188 Ckap2l (ENSCGRG00001010583) Il1a (ENSCGRG00001005306) IL1B (ENSCGRG00001019948) ENSCGRG00001015397 #37 F830045P16Rik (ENSCGRG00001019806) ENSCGRG00001018326 Pdyn (ENSCGRG00001006255) Stk35 (ENSCGRG00001009561) Tgm3 (ENSCGRG00001017883) Tgm6 (ENSCGRG00001013741) Snrpb (ENSCGRG00001023046) ENSCGRG00001019697 Tmc2 (ENSCGRG00001012157) Nop56 (ENSCGRG00001019528) Idh3b (ENSCGRG00001012059) Ebf4 (ENSCGRG00001017309) ##22 Cpxm1 (ENSCGRG00001014283) 1700020A23Rik (ENSCGRG00001021320) Tmem239 (ENSCGRG00001001392) Pced1a (ENSCGRG00001019937) Vps16 (ENSCGRG00001017458) Ptpra (ENSCGRG00001014995) Mrps26 (ENSCGRG00001018911) ENSCGRG00001009214 ENSCGRG00001008948 Avp (ENSCGRG00001009090) Ubox5 (ENSCGRG00001022453) Fastkd5 (ENSCGRG00001021453) Lzts3 (ENSCGRG00001007812) Ddrgk1 (ENSCGRG00001010910) ITPA (ENSCGRG00001009380) Golden Hamster MODERN SPECIES 631 Polr1b (ENSMAUG00000010593) Chchd5 (ENSMAUG00000022068) Slc20a1 (ENSMAUG00000017860) Ckap2l (ENSMAUG00000022127) Il1a (ENSMAUG00000018533) Il1b (ENSMAUG00000017477) ENSMAUG00000018632 Pdyn (ENSMAUG00000011076) Tgm3 (ENSMAUG00000018002) Tgm6 (ENSMAUG00000021585) ENSMAUG00000007538 ENSMAUG00000020656 Tmc2 (ENSMAUG00000006671) Nop56 (ENSMAUG00000021793) Idh3b (ENSMAUG00000020105) Ebf4 (ENSMAUG00000006779) ##22 Cpxm1 (ENSMAUG00000020338) ENSMAUG00000022047 ENSMAUG00000021075 Vps16 (ENSMAUG00000010001) Ptpra (ENSMAUG00000022109) Mrps26 (ENSMAUG00000019571) ENSMAUG00000021401 Ubox5 (ENSMAUG00000019757) Fastkd5 (ENSMAUG00000020637) Lzts3 (ENSMAUG00000021395) Ddrgk1 (ENSMAUG00000022014) Itpa (ENSMAUG00000021384) Slc4a11 (ENSMAUG00000021645) ENSMAUG00000014651 ENSMAUG00000008516 Cricetidae_B ANCESTRAL SPECIES 4 ENSGT00390000007919 ENSGT00390000014879.c.a ENSGT00530000063691.a ENSGT00390000013353 ENSGT00950000182943.jb ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.eb ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00940000165014 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 ENSGT00940000154894 Northern American deer mouse MODERN SPECIES 17 Slc20a1 (ENSPEMG00000010382) Ckap2l (ENSPEMG00000010844) Il1a (ENSPEMG00000011300) Il1b (ENSPEMG00000011618) ENSPEMG00000028968 ENSPEMG00000030059 Sirpa (ENSPEMG00000017880) Pdyn (ENSPEMG00000013267) Stk35 (ENSPEMG00000031207) Tgm3 (ENSPEMG00000017306) Tgm6 (ENSPEMG00000014968) Snrpb (ENSPEMG00000007948) Tmc2 (ENSPEMG00000014826) ENSPEMG00000030460 Idh3b (ENSPEMG00000016045) Ebf4 (ENSPEMG00000007345) ##22 Cpxm1 (ENSPEMG00000001942) 1700020A23Rik (ENSPEMG00000025056) Tmem239 (ENSPEMG00000010668) Pced1a (ENSPEMG00000014207) Vps16 (ENSPEMG00000013167) ENSPEMG00000026020 Ptpra (ENSPEMG00000001508) Mrps26 (ENSPEMG00000010334) Oxt (ENSPEMG00000009490) Avp (ENSPEMG00000003752) Ubox5 (ENSPEMG00000018299) Fastkd5 (ENSPEMG00000017742) Lzts3 (ENSPEMG00000013505) Ddrgk1 (ENSPEMG00000009063) ENSPEMG00000014788 Prairie vole MODERN SPECIES 86 Slc20a1 (ENSMOCG00000000704) Ckap2l (ENSMOCG00000021817) Il1a (ENSMOCG00000021509) Il1b (ENSMOCG00000019969) F830045P16Rik (ENSMOCG00000018895) ENSMOCG00000001396 Pdyn (ENSMOCG00000022680) Stk35 (ENSMOCG00000005935) Tgm3 (ENSMOCG00000002913) Tgm6 (ENSMOCG00000020858) ENSMOCG00000002892 Tmc2 (ENSMOCG00000015150) ENSMOCG00000004225 ENSMOCG00000018981 Idh3b (ENSMOCG00000009379) Ebf4 (ENSMOCG00000011784) ##22 Cpxm1 (ENSMOCG00000005470) 1700020A23Rik (ENSMOCG00000002438) Tmem239 (ENSMOCG00000000098) ENSMOCG00000011698 Vps16 (ENSMOCG00000010998) Ptpra (ENSMOCG00000013827) MRPS26 (ENSMOCG00000016053) Oxt (ENSMOCG00000017703) Avp (ENSMOCG00000014821) Ubox5 (ENSMOCG00000021078) Fastkd5 (ENSMOCG00000018299) Lzts3 (ENSMOCG00000019922) Ddrgk1 (ENSMOCG00000017173) ENSMOCG00000011173 Slc4a11 (ENSMOCG00000016721) Murinae ANCESTRAL SPECIES 1 ENSGT00390000007919 ENSGT00390000014879.c.a ENSGT00530000063691.a ENSGT00390000013353 ENSGT00950000182943.jb ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.eb ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00940000165014 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Mus ANCESTRAL SPECIES 1 ENSGT00390000007919 ENSGT00390000014879.c.a ENSGT00530000063691.a ENSGT00390000013353 ENSGT00950000182943.jb ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.eb ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00940000165014 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Mus_A ANCESTRAL SPECIES ENSGT00390000007919.i ENSGT00390000014879.c.a ENSGT00530000063691.a ENSGT00390000013353 ENSGT00950000182943.jb ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.eb ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00940000165014 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Mus_B ANCESTRAL SPECIES 1 ENSGT00390000007919.i ENSGT00390000014879.c.a ENSGT00530000063691.a ENSGT00390000013353 ENSGT00950000182943.jb ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.eb ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00940000165014 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Mus_C ANCESTRAL SPECIES ENSGT00390000007919.i ENSGT00390000014879.c.a ENSGT00530000063691.a ENSGT00390000013353 ENSGT00950000182943.jb ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.eb ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00940000165014 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Steppe mouse MODERN SPECIES 3100 Il1b (ENSMSIG00000011938) ENSMSIG00000011966 ENSMSIG00000011970 F830045P16Rik (ENSMSIG00000011980) Sirpa (ENSMSIG00000012006) Pdyn (ENSMSIG00000012464) Stk35 (ENSMSIG00000012494) Tgm3 (ENSMSIG00000012513) ENSMSIG00000012594 Tgm6 (ENSMSIG00000012611) Snrpb (ENSMSIG00000012633) Tmc2 (ENSMSIG00000012652) Nop56 (ENSMSIG00000012714) Idh3b (ENSMSIG00000012771) ENSMSIG00000012850 Ebf4 (ENSMSIG00000012856) ##22 Cpxm1 (ENSMSIG00000012969) 1700020A23Rik (ENSMSIG00000013042) Tmem239 (ENSMSIG00000013056) Vps16 (ENSMSIG00000013066) Ptpra (ENSMSIG00000013175) ENSMSIG00000013369 Mrps26 (ENSMSIG00000013383) Oxt (ENSMSIG00000013416) Avp (ENSMSIG00000013423) Ubox5 (ENSMSIG00000013436) ENSMSIG00000013450 Lzts3 (ENSMSIG00000013473) Ddrgk1 (ENSMSIG00000013480) ENSMSIG00000013514 Slc4a11 (ENSMSIG00000013565) spretus MODERN SPECIES 11 Chchd5 (MGP_SPRETEiJ_G0025202) Slc20a1 (MGP_SPRETEiJ_G0025203) Ckap2l (MGP_SPRETEiJ_G0025204) Il1a (MGP_SPRETEiJ_G0025205) F830045P16Rik (MGP_SPRETEiJ_G0025206) Il1b (MGP_SPRETEiJ_G0025207) Sirpa (MGP_SPRETEiJ_G0025208) Pdyn (MGP_SPRETEiJ_G0025209) Stk35 (MGP_SPRETEiJ_G0025210) Tgm3 (MGP_SPRETEiJ_G0025211) Tgm6 (MGP_SPRETEiJ_G0025212) Snrpb (MGP_SPRETEiJ_G0025213) Tmc2 (MGP_SPRETEiJ_G0025214) Nop56 (MGP_SPRETEiJ_G0025215) Idh3b (MGP_SPRETEiJ_G0025216) Ebf4 (MGP_SPRETEiJ_G0025217) ##22 Cpxm1 (MGP_SPRETEiJ_G0025218) MGP_SPRETEiJ_G0025219 1700020A23Rik (MGP_SPRETEiJ_G0025220) Tmem239 (MGP_SPRETEiJ_G0025221) Pced1a (MGP_SPRETEiJ_G0025222) Vps16 (MGP_SPRETEiJ_G0025223) Ptpra (MGP_SPRETEiJ_G0025224) Mrps26 (MGP_SPRETEiJ_G0025225) Oxt (MGP_SPRETEiJ_G0025226) Avp (MGP_SPRETEiJ_G0025227) Ubox5 (MGP_SPRETEiJ_G0025228) Fastkd5 (MGP_SPRETEiJ_G0025229) Lzts3 (MGP_SPRETEiJ_G0025230) Ddrgk1 (MGP_SPRETEiJ_G0025231) Itpa (MGP_SPRETEiJ_G0025232) Mouse MODERN SPECIES 11 Chchd5 (ENSMUSG00000037938) Slc20a1 (ENSMUSG00000027397) Ckap2l (ENSMUSG00000048327) Il1a (ENSMUSG00000027399) Il1b (ENSMUSG00000027398) F830045P16Rik (ENSMUSG00000043727) Sirpa (ENSMUSG00000037902) Pdyn (ENSMUSG00000027400) Stk35 (ENSMUSG00000037885) Tgm3 (ENSMUSG00000027401) Tgm6 (ENSMUSG00000027403) Snrpb (ENSMUSG00000027404) Tmc2 (ENSMUSG00000060332) Nop56 (ENSMUSG00000027405) Idh3b (ENSMUSG00000027406) Ebf4 (ENSMUSG00000053552) ##22 Cpxm1 (ENSMUSG00000027408) 1700020A23Rik (ENSMUSG00000027409) Tmem239 (ENSMUSG00000049692) Pced1a (ENSMUSG00000037773) Vps16 (ENSMUSG00000027411) Ptpra (ENSMUSG00000027303) Mrps26 (ENSMUSG00000037740) Oxt (ENSMUSG00000027301) Avp (ENSMUSG00000037727) Ubox5 (ENSMUSG00000027300) Fastkd5 (ENSMUSG00000079043) Lzts3 (ENSMUSG00000037703) Ddrgk1 (ENSMUSG00000068290) Itpa (ENSMUSG00000074797) Slc4a11 (ENSMUSG00000074796) Ryukyu mouse MODERN SPECIES 11 Chchd5 (MGP_CAROLIEiJ_G0024282) Slc20a1 (MGP_CAROLIEiJ_G0024283) Ckap2l (MGP_CAROLIEiJ_G0024284) Il1a (MGP_CAROLIEiJ_G0024285) Il1b (MGP_CAROLIEiJ_G0024286) F830045P16Rik (MGP_CAROLIEiJ_G0024287) Sirpa (MGP_CAROLIEiJ_G0024288) Pdyn (MGP_CAROLIEiJ_G0024289) Stk35 (MGP_CAROLIEiJ_G0024290) Tgm3 (MGP_CAROLIEiJ_G0024291) Tgm6 (MGP_CAROLIEiJ_G0024292) Snrpb (MGP_CAROLIEiJ_G0024293) Tmc2 (MGP_CAROLIEiJ_G0024294) Nop56 (MGP_CAROLIEiJ_G0024295) Idh3b (MGP_CAROLIEiJ_G0024296) Ebf4 (MGP_CAROLIEiJ_G0024297) ##22 Cpxm1 (MGP_CAROLIEiJ_G0024298) MGP_CAROLIEiJ_G0024299 1700020A23Rik (MGP_CAROLIEiJ_G0024300) Tmem239 (MGP_CAROLIEiJ_G0024301) Pced1a (MGP_CAROLIEiJ_G0024302) Vps16 (MGP_CAROLIEiJ_G0024303) Ptpra (MGP_CAROLIEiJ_G0024304) Mrps26 (MGP_CAROLIEiJ_G0024305) Oxt (MGP_CAROLIEiJ_G0024306) Avp (MGP_CAROLIEiJ_G0024307) Ubox5 (MGP_CAROLIEiJ_G0024308) Fastkd5 (MGP_CAROLIEiJ_G0024309) Lzts3 (MGP_CAROLIEiJ_G0024310) Ddrgk1 (MGP_CAROLIEiJ_G0024311) Itpa (MGP_CAROLIEiJ_G0024312) Shrew mouse MODERN SPECIES 16 Chchd5 (MGP_PahariEiJ_G0025727) Slc20a1 (MGP_PahariEiJ_G0025728) Ckap2l (MGP_PahariEiJ_G0025729) Il1a (MGP_PahariEiJ_G0025730) Il1b (MGP_PahariEiJ_G0025731) F830045P16Rik (MGP_PahariEiJ_G0025732) Sirpa (MGP_PahariEiJ_G0025733) Pdyn (MGP_PahariEiJ_G0025734) Stk35 (MGP_PahariEiJ_G0025735) Tgm3 (MGP_PahariEiJ_G0025736) Tgm6 (MGP_PahariEiJ_G0025737) Snrpb (MGP_PahariEiJ_G0025738) Tmc2 (MGP_PahariEiJ_G0025739) Nop56 (MGP_PahariEiJ_G0025740) Idh3b (MGP_PahariEiJ_G0025741) Ebf4 (MGP_PahariEiJ_G0025742) ##22 Cpxm1 (MGP_PahariEiJ_G0025743) MGP_PahariEiJ_G0025744 1700020A23Rik (MGP_PahariEiJ_G0025745) Tmem239 (MGP_PahariEiJ_G0025746) Pced1a (MGP_PahariEiJ_G0025747) Vps16 (MGP_PahariEiJ_G0025748) Ptpra (MGP_PahariEiJ_G0025749) Mrps26 (MGP_PahariEiJ_G0025750) Oxt (MGP_PahariEiJ_G0025751) Avp (MGP_PahariEiJ_G0025752) MGP_PahariEiJ_G0025753 MGP_PahariEiJ_G0025754 Lzts3 (MGP_PahariEiJ_G0025755) Ddrgk1 (MGP_PahariEiJ_G0025756) Itpa (MGP_PahariEiJ_G0025757) Rat MODERN SPECIES 13 Il1a (ENSRNOG00000004575) Il1b (ENSRNOG00000004649) Sirpb3 (ENSRNOG00000026061) Sirpa (ENSRNOG00000004763) Pdyn (ENSRNOG00000026036) AABR07053716.1 (ENSRNOG00000029173) Stk35 (ENSRNOG00000006002) Tgm3 (ENSRNOG00000006753) Tgm6 (ENSRNOG00000006830) Snrpb (ENSRNOG00000006961) Tmc2 (ENSRNOG00000007017) Nop56 (ENSRNOG00000007128) Idh3b (ENSRNOG00000007316) AABR07053734.1 (ENSRNOG00000031034) Rps12l3 (ENSRNOG00000033913) Ebf4 (ENSRNOG00000007408) ##22 Cpxm1 (ENSRNOG00000021220) Tmem239 (ENSRNOG00000047004) Pced1a (ENSRNOG00000021221) Vps16 (ENSRNOG00000021222) Ptpra (ENSRNOG00000021223) Mrps26 (ENSRNOG00000021224) Oxt (ENSRNOG00000021225) Avp (ENSRNOG00000021229) Ubox5 (ENSRNOG00000021230) Fastkd5 (ENSRNOG00000053270) Lzts3 (ENSRNOG00000021231) Ddrgk1 (ENSRNOG00000021232) Itpa (ENSRNOG00000021233) Slc4a11 (ENSRNOG00000021234) Dnaaf9 (ENSRNOG00000021237) Upper Galilee mountains blind mole rat MODERN SPECIES 1686 Stk35 (ENSNGAG00000018787) Tgm3 (ENSNGAG00000009705) Tgm6 (ENSNGAG00000008804) Snrpb (ENSNGAG00000012051) ENSNGAG00000015321 ENSNGAG00000014327 Tmc2 (ENSNGAG00000020836) ENSNGAG00000020493 ENSNGAG00000019819 Idh3b (ENSNGAG00000016651) Ebf4 (ENSNGAG00000010179) ##22 Cpxm1 (ENSNGAG00000020071) Tmem239 (ENSNGAG00000014119) Pced1a (ENSNGAG00000001267) Vps16 (ENSNGAG00000019525) Ptpra (ENSNGAG00000015467) Mrps26 (ENSNGAG00000013778) Oxt (ENSNGAG00000010896) Avp (ENSNGAG00000007700) Ubox5 (ENSNGAG00000020965) Lzts3 (ENSNGAG00000018130) Ddrgk1 (ENSNGAG00000000119) Itpa (ENSNGAG00000016121) Slc4a11 (ENSNGAG00000018270) Dnaaf9 (ENSNGAG00000005585) ENSNGAG00000015989 Lesser Egyptian jerboa MODERN SPECIES 84 ENSJJAG00000004224 Tgm3 (ENSJJAG00000018372) Tgm6 (ENSJJAG00000012854) Snrpb (ENSJJAG00000024170) Tmc2 (ENSJJAG00000009946) Ebf4 (ENSJJAG00000022459) ##22 Cpxm1 (ENSJJAG00000003720) Tmem239 (ENSJJAG00000020111) Ptpra (ENSJJAG00000015717) Mrps26 (ENSJJAG00000021092) Oxt (ENSJJAG00000023461) Avp (ENSJJAG00000024270) Ubox5 (ENSJJAG00000005580) ENSJJAG00000016818 Fastkd5 (ENSJJAG00000018838) Itpa (ENSJJAG00000019256) Slc4a11 (ENSJJAG00000023904) Dnaaf9 (ENSJJAG00000010931) Atrn (ENSJJAG00000013554) Gfra4 (ENSJJAG00000023836) Adam33 (ENSJJAG00000018028) Rodentia_A ANCESTRAL SPECIES 17 ENSGT00940000153311.a.b.a ENSGT00520000055567.a.a.a ENSGT00960000186656.a.b ENSGT00960000186656.a.a.a.b ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b ENSGT00940000171162 ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Hystricomorpha ANCESTRAL SPECIES 10 ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b ENSGT00940000171162 ENSGT00960000186656.a.a.a.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00940000165014 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Hystricomorpha_a ANCESTRAL SPECIES 8 ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00940000165014 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 ENSGT00940000154894 Hystricomorpha_b ANCESTRAL SPECIES 31 ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00940000165014 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 ENSGT00940000154894 Long-tailed chinchilla MODERN SPECIES 122 ENSCLAG00000016105 PCDHB7 (ENSCLAG00000011655) ENSCLAG00000012211 PCDHB4 (ENSCLAG00000012265) PCDHB2 (ENSCLAG00000012148) ENSCLAG00000013436 ENSCLAG00000013550 PDYN (ENSCLAG00000010082) STK35 (ENSCLAG00000010739) TGM3 (ENSCLAG00000010817) TGM6 (ENSCLAG00000012346) SNRPB (ENSCLAG00000012442) TMC2 (ENSCLAG00000013446) NOP56 (ENSCLAG00000013816) IDH3B (ENSCLAG00000012613) EBF4 (ENSCLAG00000016129) ##22 CPXM1 (ENSCLAG00000010049) ENSCLAG00000009947 TMEM239 (ENSCLAG00000010005) PCED1A (ENSCLAG00000010239) VPS16 (ENSCLAG00000010899) PTPRA (ENSCLAG00000014599) MRPS26 (ENSCLAG00000011719) UBOX5 (ENSCLAG00000012136) FASTKD5 (ENSCLAG00000017812) LZTS3 (ENSCLAG00000010167) DDRGK1 (ENSCLAG00000012959) ITPA (ENSCLAG00000012396) SLC4A11 (ENSCLAG00000012612) DNAAF9 (ENSCLAG00000013491) ENSCLAG00000012573 Degu MODERN SPECIES 101 ENSODEG00000006224 ENSODEG00000004634 PDYN (ENSODEG00000004508) STK35 (ENSODEG00000004809) TGM3 (ENSODEG00000007471) TGM6 (ENSODEG00000008085) ENSODEG00000004305 TMC2 (ENSODEG00000004874) ENSODEG00000005500 ENSODEG00000005708 IDH3B (ENSODEG00000006040) EBF4 (ENSODEG00000005079) ##22 CPXM1 (ENSODEG00000005511) ENSODEG00000004687 PCED1A (ENSODEG00000005153) VPS16 (ENSODEG00000004474) PTPRA (ENSODEG00000005651) MRPS26 (ENSODEG00000004501) ENSODEG00000004605 AVP (ENSODEG00000006589) UBOX5 (ENSODEG00000006821) FASTKD5 (ENSODEG00000005773) ENSODEG00000019287 LZTS3 (ENSODEG00000006348) DDRGK1 (ENSODEG00000005502) ITPA (ENSODEG00000005202) SLC4A11 (ENSODEG00000006000) Guinea pig MODERN SPECIES 8 PLXNB1 (ENSCPOG00000011366) ENSCPOG00000038486 ENSCPOG00000022121 ENSCPOG00000021429 ENSCPOG00000025142 ENSCPOG00000019652 ENSCPOG00000033569 PDYN (ENSCPOG00000024291) STK35 (ENSCPOG00000002242) TGM3 (ENSCPOG00000015307) TGM6 (ENSCPOG00000015309) SNRPB (ENSCPOG00000039408) TMC2 (ENSCPOG00000015312) NOP56 (ENSCPOG00000015315) IDH3B (ENSCPOG00000015319) EBF4 (ENSCPOG00000004862) ##22 CPXM1 (ENSCPOG00000011936) PCED1A (ENSCPOG00000025475) VPS16 (ENSCPOG00000003602) PTPRA (ENSCPOG00000020873) MRPS26 (ENSCPOG00000037912) ENSCPOG00000001717 AVP (ENSCPOG00000023592) FASTKD5 (ENSCPOG00000023356) UBOX5 (ENSCPOG00000020493) LZTS3 (ENSCPOG00000034395) DDRGK1 (ENSCPOG00000001272) ITPA (ENSCPOG00000039557) SLC4A11 (ENSCPOG00000001277) DNAAF9 (ENSCPOG00000038300) ATRN (ENSCPOG00000007193) Naked mole-rat female MODERN SPECIES 6 ENSHGLG00000036341 ENSHGLG00000041115 ENSHGLG00000006371 ENSHGLG00000036503 ENSHGLG00000037296 ENSHGLG00000008095 ENSHGLG00000034900 STK35 (ENSHGLG00000049056) TGM3 (ENSHGLG00000012294) ENSHGLG00000044597 TGM6 (ENSHGLG00000012751) ENSHGLG00000036511 TMC2 (ENSHGLG00000017324) NOP56 (ENSHGLG00000015992) IDH3B (ENSHGLG00000015582) EBF4 (ENSHGLG00000015872) ##22 ENSHGLG00000005535 CPXM1 (ENSHGLG00000009390) TMEM239 (ENSHGLG00000006404) PCED1A (ENSHGLG00000007166) VPS16 (ENSHGLG00000009537) ENSHGLG00000015648 PTPRA (ENSHGLG00000013139) GNRH2 (ENSHGLG00000048134) MRPS26 (ENSHGLG00000041915) ENSHGLG00000036143 ENSHGLG00000049775 ENSHGLG00000042720 ENSHGLG00000039750 ITPA (ENSHGLG00000035385) ENSHGLG00000033820 Sciuridae ANCESTRAL SPECIES 13 ENSGT00940000161179 ENSGT00940000153311.a.b.a ENSGT00520000055567.a.a.a ENSGT00960000186656.a.b ENSGT00960000186656.a.a.a.b ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.a.a.a.a ENSGT00390000004511.d.a.a.b ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 Marmotini ANCESTRAL SPECIES 5 ENSGT00940000153311.a.b.a ENSGT00520000055567.a.a.a ENSGT00960000186656.a.b ENSGT00960000186656.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.x.b.a.a ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.x.a ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.a.a.a.a.a ENSGT00390000004511.d.a.a.b ENSGT00390000004511.d.a.a.a.a.a.b ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b Marmotini_b ANCESTRAL SPECIES 18 ENSGT00520000055567.a.a.a ENSGT00960000186656.a.a.a.a.a.b.x.b.b ENSGT00960000186656.a.a.a.a.a.b.w ENSGT00960000186656.a.a.a.a.b ENSGT00940000171162 ENSGT00960000186656.a.a.a.a.a.b.x.b.a.a ENSGT00960000186656.a.a.a.a.a.b.x.a ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.b.b ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.a.a.a.a.a ENSGT00390000004511.d.a.a.b ENSGT00390000004511.d.a.a.a.a.a.b ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b Squirrel MODERN SPECIES 85 SDCBP2 (ENSSTOG00000009872) ENSSTOG00000012646 NSFL1C (ENSSTOG00000010569) ENSSTOG00000028271 ENSSTOG00000026462 ENSSTOG00000023767 ENSSTOG00000020979 PDYN (ENSSTOG00000022694) STK35 (ENSSTOG00000024262) TGM3 (ENSSTOG00000005367) TGM6 (ENSSTOG00000008836) ENSSTOG00000027821 TMC2 (ENSSTOG00000012485) NOP56 (ENSSTOG00000012503) IDH3B (ENSSTOG00000012515) EBF4 (ENSSTOG00000016352) ##22 CPXM1 (ENSSTOG00000016354) ENSSTOG00000023115 TMEM239 (ENSSTOG00000024083) PCED1A (ENSSTOG00000016356) VPS16 (ENSSTOG00000016357) PTPRA (ENSSTOG00000023551) MRPS26 (ENSSTOG00000026786) ENSSTOG00000030242 ENSSTOG00000015044 ENSSTOG00000026916 ENSSTOG00000023996 AVP (ENSSTOG00000023202) UBOX5 (ENSSTOG00000019785) LZTS3 (ENSSTOG00000006427) DDRGK1 (ENSSTOG00000006435) Arctic ground squirrel MODERN SPECIES 435 PDYN (ENSUPAG00010023368) STK35 (ENSUPAG00010023369) TGM3 (ENSUPAG00010023370) TGM6 (ENSUPAG00010023371) ENSUPAG00010023373 TMC2 (ENSUPAG00010023374) NOP56 (ENSUPAG00010023375) IDH3B (ENSUPAG00010023381) EBF4 (ENSUPAG00010023382) ##22 CPXM1 (ENSUPAG00010023383) C20orf141 (ENSUPAG00010023384) TMEM239 (ENSUPAG00010023385) PCED1A (ENSUPAG00010023386) VPS16 (ENSUPAG00010023387) PTPRA (ENSUPAG00010023388) GNRH2 (ENSUPAG00010023389) MRPS26 (ENSUPAG00010023390) ENSUPAG00010023391 ENSUPAG00010023392 ENSUPAG00010023393 ENSUPAG00010023394 AVP (ENSUPAG00010023395) UBOX5 (ENSUPAG00010023396) FASTKD5 (ENSUPAG00010023397) Alpin marmot MODERN SPECIES ENSMMMG00000023868 ENSMMMG00000023876 ENSMMMG00000023877 ENSMMMG00000023880 ENSMMMG00000023881 ENSMMMG00000023882 PDYN (ENSMMMG00000023883) STK35 (ENSMMMG00000023884) TGM3 (ENSMMMG00000023885) TGM6 (ENSMMMG00000023886) SNRPB (ENSMMMG00000023887) TMC2 (ENSMMMG00000023888) ENSMMMG00000023889 ENSMMMG00000023895 IDH3B (ENSMMMG00000023896) EBF4 (ENSMMMG00000023897) ##22 CPXM1 (ENSMMMG00000023898) C20orf141 (ENSMMMG00000023899) TMEM239 (ENSMMMG00000023900) PCED1A (ENSMMMG00000023901) VPS16 (ENSMMMG00000023902) ENSMMMG00000023903 PTPRA (ENSMMMG00000023904) GNRH2 (ENSMMMG00000023905) MRPS26 (ENSMMMG00000023906) ENSMMMG00000023908 ENSMMMG00000023911 AVP (ENSMMMG00000023912) ENSMMMG00000023913 UBOX5 (ENSMMMG00000023914) FASTKD5 (ENSMMMG00000023915) Eurasian red squirrel MODERN SPECIES 11 SIRPB2 (ENSSVLG00005011887) ENSSVLG00005011822 ENSSVLG00005011724 ENSSVLG00005011661 ENSSVLG00005010948 ENSSVLG00005010828 ENSSVLG00005010761 PDYN (ENSSVLG00005010701) STK35 (ENSSVLG00005010658) TGM3 (ENSSVLG00005010540) TGM6 (ENSSVLG00005010351) ENSSVLG00005010216 TMC2 (ENSSVLG00005010104) NOP56 (ENSSVLG00005010016) IDH3B (ENSSVLG00005009944) EBF4 (ENSSVLG00005009723) ##22 CPXM1 (ENSSVLG00005009609) C20orf141 (ENSSVLG00005009574) TMEM239 (ENSSVLG00005009555) PCED1A (ENSSVLG00005009512) VPS16 (ENSSVLG00005009245) PTPRA (ENSSVLG00005009119) GNRH2 (ENSSVLG00005009052) MRPS26 (ENSSVLG00005009025) ENSSVLG00005008985 ENSSVLG00005008922 ENSSVLG00005008884 ENSSVLG00005008834 ENSSVLG00005008791 AVP (ENSSVLG00005008767) UBOX5 (ENSSVLG00005008732) Lagomorpha ANCESTRAL SPECIES 67 ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000004511.d.a.b ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00510000049555 ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 ENSGT00940000154894 ENSGT00390000003692 Rabbit MODERN SPECIES 15 NSFL1C (ENSOCUG00000012745) SIRPB2 (ENSOCUG00000012752) ENSOCUG00000029656 ENSOCUG00000025546 ENSOCUG00000026745 ENSOCUG00000023941 PDYN (ENSOCUG00000005246) STK35 (ENSOCUG00000000907) TGM3 (ENSOCUG00000001114) TGM6 (ENSOCUG00000014031) ENSOCUG00000014042 ENSOCUG00000006902 TMC2 (ENSOCUG00000014078) NOP56 (ENSOCUG00000014960) IDH3B (ENSOCUG00000024051) EBF4 (ENSOCUG00000023917) ##22 CPXM1 (ENSOCUG00000006186) ENSOCUG00000007314 PCED1A (ENSOCUG00000014939) VPS16 (ENSOCUG00000012371) PTPRA (ENSOCUG00000021376) ENSOCUG00000001769 ENSOCUG00000032897 MRPS26 (ENSOCUG00000012218) ENSOCUG00000008352 UBOX5 (ENSOCUG00000026346) LZTS3 (ENSOCUG00000004066) DDRGK1 (ENSOCUG00000012618) ITPA (ENSOCUG00000004070) SLC4A11 (ENSOCUG00000004077) DNAAF9 (ENSOCUG00000025410) Pika MODERN SPECIES 5098 EBF4 (ENSOPRG00000013703) ##22 Tree shrew MODERN SPECIES 5015 ENSTBEG00000016671 PDYN (ENSTBEG00000017220) ENSTBEG00000017296 TGM3 (ENSTBEG00000017304) TGM6 (ENSTBEG00000009836) SNRPB (ENSTBEG00000010040) TMC2 (ENSTBEG00000010623) NOP56 (ENSTBEG00000011249) IDH3B (ENSTBEG00000011579) ENSTBEG00000011866 ##22 CPXM1 (ENSTBEG00000012173) PCED1A (ENSTBEG00000012804) VPS16 (ENSTBEG00000012867) Primates ANCESTRAL SPECIES 17 ENSGT00940000153311.a.b.a ENSGT00520000055567.a.a.a ENSGT00960000186656.a.b ENSGT00960000186656.a.a.b ENSGT00960000186656.a.a.a.a.a.b ENSGT00960000186656.a.a.a.a.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Haplorrhini ANCESTRAL SPECIES 13 ENSGT00940000153311.a.b.a ENSGT00520000055567.a.a.a ENSGT00960000186656.a.b ENSGT00960000186656.a.a.b ENSGT00960000186656.a.a.a.a.a.b ENSGT00960000186656.a.a.a.a.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.b ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Tarsier DUPLICATION Tarsier MODERN SPECIES 1794 ENSTSYG00000030931 ##22 ENSTSYG00000031417 ##22 ENSTSYG00000032743 CPXM1 (ENSTSYG00000014344) Tarsier MODERN SPECIES 1794 ENSTSYG00000030931 ##22 ENSTSYG00000031417 ##22 ENSTSYG00000032743 CPXM1 (ENSTSYG00000014344) Simiiformes ANCESTRAL SPECIES 18 ENSGT00960000186656.a.b ENSGT00960000186656.a.a.b ENSGT00960000186656.a.a.a.a.a.b.k ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.l ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT00940000164774 ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.b ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Platyrrhini ANCESTRAL SPECIES 11 ENSGT00520000055567.a.a.a.e.a ENSGT00960000186656.a.b ENSGT00960000186656.a.a.b ENSGT00960000186656.a.a.a.a.a.b.k ENSGT00960000186656.a.a.a.a.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a.l ENSGT00940000164774 ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896.g ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453.j ENSGT01050000247620 ENSGT00390000008453.i ENSGT00390000004511.d.b ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT00940000154078.b ENSGT00390000017193 Cebidae ANCESTRAL SPECIES 13 ENSGT00520000055567.a.a.a.e.a ENSGT00960000186656.a.b ENSGT00960000186656.a.a.b ENSGT00960000186656.a.a.a.a.a.b.k ENSGT00960000186656.a.a.a.a.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a.l ENSGT00940000164774 ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896.g ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453.j ENSGT00390000004511.d.b ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 ENSGT00940000154894 Marmoset MODERN SPECIES 17 ENSCJAG00000020908 ENSCJAG00000020931 SIRPD (ENSCJAG00000064285) ENSCJAG00000043683 ENSCJAG00000078130 ENSCJAG00000074428 ENSCJAG00000046439 ENSCJAG00000020939 PDYN (ENSCJAG00000073299) STK35 (ENSCJAG00000020949) TGM6 (ENSCJAG00000020950) ENSCJAG00000020971 TMC2 (ENSCJAG00000020990) NOP56 (ENSCJAG00000020999) IDH3B (ENSCJAG00000021002) EBF4 (ENSCJAG00000021027) ##22 CPXM1 (ENSCJAG00000021048) ENSCJAG00000074099 TMEM239 (ENSCJAG00000021046) PCED1A (ENSCJAG00000021056) VPS16 (ENSCJAG00000021065) PTPRA (ENSCJAG00000021075) ENSCJAG00000082070 GNRH2 (ENSCJAG00000021086) MRPS26 (ENSCJAG00000021090) OXT (ENSCJAG00000074925) AVP (ENSCJAG00000021094) UBOX5 (ENSCJAG00000021095) LZTS3 (ENSCJAG00000047589) DDRGK1 (ENSCJAG00000021106) ITPA (ENSCJAG00000021114) Cebidae_a ANCESTRAL SPECIES 2 ENSGT00520000055567.a.a.a.e.a ENSGT00960000186656.a.b ENSGT00960000186656.a.a.b ENSGT00960000186656.a.a.a.a.a.b.k ENSGT00960000186656.a.a.a.a.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a.l ENSGT00940000164774 ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896.g ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453.j ENSGT00390000004511.d.b ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 ENSGT00940000154894 Capuchin MODERN SPECIES 328 STK35 (ENSCCAG00000022994) TGM3 (ENSCCAG00000032460) TGM6 (ENSCCAG00000025799) SNRPB (ENSCCAG00000026002) ENSCCAG00000030974 ZNF343 (ENSCCAG00000028537) TMC2 (ENSCCAG00000008196) NOP56 (ENSCCAG00000023832) IDH3B (ENSCCAG00000036317) EBF4 (ENSCCAG00000032903) ##22 ENSCCAG00000027539 CPXM1 (ENSCCAG00000035733) C20orf141 (ENSCCAG00000034249) TMEM239 (ENSCCAG00000019930) PCED1A (ENSCCAG00000027769) VPS16 (ENSCCAG00000028163) PTPRA (ENSCCAG00000023189) GNRH2 (ENSCCAG00000000051) ENSCCAG00000028201 OXT (ENSCCAG00000032860) AVP (ENSCCAG00000024006) UBOX5 (ENSCCAG00000020530) LZTS3 (ENSCCAG00000035824) DDRGK1 (ENSCCAG00000021115) ITPA (ENSCCAG00000022878) Bolivian squirrel monkey MODERN SPECIES 182 SIRPB2 (ENSSBOG00000021604) SIRPD (ENSSBOG00000031734) ENSSBOG00000034746 ENSSBOG00000022308 ENSSBOG00000034147 PDYN (ENSSBOG00000030137) STK35 (ENSSBOG00000027022) TGM3 (ENSSBOG00000020728) TGM6 (ENSSBOG00000028017) SNRPB (ENSSBOG00000027310) ENSSBOG00000024454 ENSSBOG00000029706 TMC2 (ENSSBOG00000027555) NOP56 (ENSSBOG00000023623) IDH3B (ENSSBOG00000033226) EBF4 (ENSSBOG00000028938) ##22 CPXM1 (ENSSBOG00000027100) ENSSBOG00000011662 C20orf141 (ENSSBOG00000017171) TMEM239 (ENSSBOG00000020753) PCED1A (ENSSBOG00000028006) ENSSBOG00000012725 PTPRA (ENSSBOG00000016941) GNRH2 (ENSSBOG00000020288) MRPS26 (ENSSBOG00000020407) OXT (ENSSBOG00000012867) UBOX5 (ENSSBOG00000031934) LZTS3 (ENSSBOG00000021876) DDRGK1 (ENSSBOG00000020146) ITPA (ENSSBOG00000033221) SLC4A11 (ENSSBOG00000033057) Mas night monkey MODERN SPECIES 1017 NSFL1C (ENSANAG00000036134) SIRPB2 (ENSANAG00000035716) SIRPD (ENSANAG00000034065) ENSANAG00000029441 ENSANAG00000035617 ENSANAG00000036610 PDYN (ENSANAG00000009836) ENSANAG00000027630 TGM3 (ENSANAG00000038512) TGM6 (ENSANAG00000027021) ENSANAG00000024443 ZNF343 (ENSANAG00000009075) TMC2 (ENSANAG00000030091) NOP56 (ENSANAG00000033253) IDH3B (ENSANAG00000032058) EBF4 (ENSANAG00000022950) ##22 CPXM1 (ENSANAG00000024176) C20orf141 (ENSANAG00000035344) TMEM239 (ENSANAG00000035366) PCED1A (ENSANAG00000032335) VPS16 (ENSANAG00000021734) PTPRA (ENSANAG00000037685) ENSANAG00000027324 ENSANAG00000033577 OXT (ENSANAG00000037836) AVP (ENSANAG00000037057) UBOX5 (ENSANAG00000025059) LZTS3 (ENSANAG00000036389) DDRGK1 (ENSANAG00000026902) ITPA (ENSANAG00000027150) SLC4A11 (ENSANAG00000026117) Catarrhini ANCESTRAL SPECIES 19 ENSGT00960000186656.a.b ENSGT00960000186656.a.a.b ENSGT00960000186656.a.a.a.a.a.b.k ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.l ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT00940000164774 ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00910000147235 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.b ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 Cercopithecidae ANCESTRAL SPECIES 16 ENSGT00960000186656.a.a.a.a.a.b.l.a ENSGT00960000186656.a.a.a.a.a.b.k ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.l.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT00940000164774 ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00910000147235 ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.b ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Rhinopithecus ANCESTRAL SPECIES 58 ENSGT00960000186656.a.a.a.a.a.b.l.b.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT00940000164774 ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00910000147235 ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.b ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 ENSGT00940000154894 Black snub-nosed monkey MODERN SPECIES 419 SIRPG (ENSRBIG00000029813) ENSRBIG00000029667 ENSRBIG00000035518 PDYN (ENSRBIG00000033945) STK35 (ENSRBIG00000042621) TGM3 (ENSRBIG00000033078) TGM6 (ENSRBIG00000027342) SNRPB (ENSRBIG00000040505) ENSRBIG00000038098 ZNF343 (ENSRBIG00000042785) TMC2 (ENSRBIG00000043354) NOP56 (ENSRBIG00000030689) IDH3B (ENSRBIG00000024462) EBF4 (ENSRBIG00000041117) ##22 ENSRBIG00000037696 CPXM1 (ENSRBIG00000043940) C20orf141 (ENSRBIG00000035456) TMEM239 (ENSRBIG00000044922) PCED1A (ENSRBIG00000044930) VPS16 (ENSRBIG00000040595) PTPRA (ENSRBIG00000025787) GNRH2 (ENSRBIG00000032214) MRPS26 (ENSRBIG00000031683) OXT (ENSRBIG00000032307) AVP (ENSRBIG00000042065) UBOX5 (ENSRBIG00000030169) LZTS3 (ENSRBIG00000040324) DDRGK1 (ENSRBIG00000037650) ITPA (ENSRBIG00000031680) Golden snub-nosed monkey MODERN SPECIES 2118 ENSRROG00000035911 ENSRROG00000038191 PDYN (ENSRROG00000042871) STK35 (ENSRROG00000029460) TGM3 (ENSRROG00000045750) TGM6 (ENSRROG00000007440) ENSRROG00000001980 SNRPB (ENSRROG00000036094) ZNF343 (ENSRROG00000029443) TMC2 (ENSRROG00000013022) NOP56 (ENSRROG00000020071) IDH3B (ENSRROG00000025649) ENSRROG00000030818 EBF4 (ENSRROG00000042792) ##22 CPXM1 (ENSRROG00000031677) C20orf141 (ENSRROG00000045663) TMEM239 (ENSRROG00000040372) PCED1A (ENSRROG00000033585) VPS16 (ENSRROG00000042349) PTPRA (ENSRROG00000038365) GNRH2 (ENSRROG00000038418) MRPS26 (ENSRROG00000039447) OXT (ENSRROG00000031112) AVP (ENSRROG00000031119) UBOX5 (ENSRROG00000000087) LZTS3 (ENSRROG00000032673) DDRGK1 (ENSRROG00000032165) ITPA (ENSRROG00000034456) SLC4A11 (ENSRROG00000040510) Cercopithecinae ANCESTRAL SPECIES 19 ENSGT00960000186656.a.a.a.a.a.b.l.a ENSGT00960000186656.a.a.a.a.a.b.k ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.l.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT00940000164774 ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00910000147235 ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.b ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Vervet Monkey MODERN SPECIES 11 SIRPD (ENSCSAG00000010673) ENSCSAG00000010682 ENSCSAG00000010716 SIRPG (ENSCSAG00000010729) ENSCSAG00000010732 ENSCSAG00000010742 PDYN (ENSCSAG00000010750) STK35 (ENSCSAG00000010755) TGM3 (ENSCSAG00000010799) TGM6 (ENSCSAG00000010830) SNRPB (ENSCSAG00000010840) ENSCSAG00000010844 TMC2 (ENSCSAG00000010896) NOP56 (ENSCSAG00000010955) IDH3B (ENSCSAG00000010969) EBF4 (ENSCSAG00000010974) ##22 CPXM1 (ENSCSAG00000010982) SYNDIG1 (ENSCSAG00000010985) CST5 (ENSCSAG00000010994) ENSCSAG00000011001 ENSCSAG00000011012 CST9L (ENSCSAG00000011017) ENSCSAG00000011022 ENSCSAG00000011025 CST3 (ENSCSAG00000011027) ENSCSAG00000011032 ENSCSAG00000011037 GZF1 (ENSCSAG00000011054) NXT1 (ENSCSAG00000018678) CD93 (ENSCSAG00000011058) THBD (ENSCSAG00000018677) Cercopithecinae_a ANCESTRAL SPECIES 18 ENSGT00960000186656.a.a.a.a.a.b.l.a ENSGT00960000186656.a.a.a.a.a.b.k ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.l.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT00940000164774 ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00910000147235 ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.b ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Cercopithecinae_b ANCESTRAL SPECIES 12 ENSGT00960000186656.a.a.a.a.a.b.l.a ENSGT00960000186656.a.a.a.a.a.b.k ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.l.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT00940000164774 ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00910000147235 ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.b ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Olive baboon MODERN SPECIES 7 NSFL1C (ENSPANG00000013448) SIRPB2 (ENSPANG00000000407) ENSPANG00000029852 ENSPANG00000042302 ENSPANG00000045053 PDYN (ENSPANG00000045629) STK35 (ENSPANG00000004322) TGM3 (ENSPANG00000021244) ENSPANG00000013447 TGM6 (ENSPANG00000003905) SNRPB (ENSPANG00000020362) ZNF343 (ENSPANG00000013446) TMC2 (ENSPANG00000016040) NOP56 (ENSPANG00000023584) IDH3B (ENSPANG00000023587) EBF4 (ENSPANG00000007524) ##22 CPXM1 (ENSPANG00000003904) C20orf141 (ENSPANG00000021243) TMEM239 (ENSPANG00000024848) PCED1A (ENSPANG00000018664) VPS16 (ENSPANG00000018665) PTPRA (ENSPANG00000018667) ENSPANG00000004889 OXT (ENSPANG00000018780) AVP (ENSPANG00000024265) UBOX5 (ENSPANG00000023848) FASTKD5 (ENSPANG00000048763) LZTS3 (ENSPANG00000045050) DDRGK1 (ENSPANG00000018779) ITPA (ENSPANG00000037644) SLC4A11 (ENSPANG00000006862) Cercopithecinae_d ANCESTRAL SPECIES 2 ENSGT00960000186656.a.a.a.a.a.b.l.a ENSGT00960000186656.a.a.a.a.a.b.k ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.l.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT00940000164774 ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00910000147235 ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.b ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 ENSGT00940000154894 Sooty mangabey MODERN SPECIES 602 SIRPG (ENSCATG00000040190) ENSCATG00000040461 ENSCATG00000044290 PDYN (ENSCATG00000034072) STK35 (ENSCATG00000029759) ENSCATG00000031993 TGM3 (ENSCATG00000040841) TGM6 (ENSCATG00000032666) ENSCATG00000030342 SNRPB (ENSCATG00000030230) ZNF343 (ENSCATG00000035883) TMC2 (ENSCATG00000040490) NOP56 (ENSCATG00000031167) IDH3B (ENSCATG00000044692) ENSCATG00000044630 EBF4 (ENSCATG00000024368) ##22 CPXM1 (ENSCATG00000031898) C20orf141 (ENSCATG00000030817) TMEM239 (ENSCATG00000044765) PCED1A (ENSCATG00000033865) VPS16 (ENSCATG00000038232) PTPRA (ENSCATG00000013660) GNRH2 (ENSCATG00000021226) MRPS26 (ENSCATG00000042895) OXT (ENSCATG00000039403) AVP (ENSCATG00000039090) UBOX5 (ENSCATG00000021521) LZTS3 (ENSCATG00000044716) DDRGK1 (ENSCATG00000041602) ITPA (ENSCATG00000041788) SLC4A11 (ENSCATG00000030554) Drill MODERN SPECIES 77 ENSMLEG00000039704 SIRPG (ENSMLEG00000030528) ENSMLEG00000036013 ENSMLEG00000032890 PDYN (ENSMLEG00000028747) STK35 (ENSMLEG00000027916) TGM3 (ENSMLEG00000030273) TGM6 (ENSMLEG00000031147) SNRPB (ENSMLEG00000022346) ENSMLEG00000042288 ZNF343 (ENSMLEG00000037595) TMC2 (ENSMLEG00000043451) NOP56 (ENSMLEG00000020816) IDH3B (ENSMLEG00000040492) ENSMLEG00000031773 ENSMLEG00000043603 ##22 CPXM1 (ENSMLEG00000032091) C20orf141 (ENSMLEG00000028498) TMEM239 (ENSMLEG00000035749) PCED1A (ENSMLEG00000026689) VPS16 (ENSMLEG00000008392) PTPRA (ENSMLEG00000033229) GNRH2 (ENSMLEG00000031186) OXT (ENSMLEG00000037934) UBOX5 (ENSMLEG00000043043) LZTS3 (ENSMLEG00000040437) DDRGK1 (ENSMLEG00000041186) ITPA (ENSMLEG00000040606) SLC4A11 (ENSMLEG00000026373) DNAAF9 (ENSMLEG00000029600) ENSMLEG00000026517 Macaca ANCESTRAL SPECIES 16 ENSGT00960000186656.a.a.a.a.a.b.l.a ENSGT00960000186656.a.a.a.a.a.b.k ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.l.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000164774 ENSGT00940000155052.e.a ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00910000147235 ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.b ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 ENSGT00940000154894 Pig-tailed macaque MODERN SPECIES 574 SIRPG (ENSMNEG00000028495) ENSMNEG00000028514 ENSMNEG00000018475 PDYN (ENSMNEG00000039135) STK35 (ENSMNEG00000038623) TGM3 (ENSMNEG00000018311) TGM6 (ENSMNEG00000037273) ENSMNEG00000041027 SNRPB (ENSMNEG00000027954) ZNF343 (ENSMNEG00000044885) TMC2 (ENSMNEG00000036362) NOP56 (ENSMNEG00000033186) IDH3B (ENSMNEG00000039596) ENSMNEG00000011376 EBF4 (ENSMNEG00000042057) ##22 CPXM1 (ENSMNEG00000034070) C20orf141 (ENSMNEG00000030475) TMEM239 (ENSMNEG00000045200) PCED1A (ENSMNEG00000044351) VPS16 (ENSMNEG00000037347) PTPRA (ENSMNEG00000030257) GNRH2 (ENSMNEG00000032312) MRPS26 (ENSMNEG00000033521) OXT (ENSMNEG00000040501) AVP (ENSMNEG00000037006) UBOX5 (ENSMNEG00000042470) LZTS3 (ENSMNEG00000022192) DDRGK1 (ENSMNEG00000029867) ITPA (ENSMNEG00000032055) SLC4A11 (ENSMNEG00000000904) Macaca_a ANCESTRAL SPECIES 18 ENSGT00960000186656.a.b ENSGT00960000186656.a.a.b ENSGT00960000186656.a.a.a.a.a.b.l.a ENSGT00960000186656.a.a.a.a.a.b.k ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.l.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.b ENSGT00390000004511.d.a.b ENSGT01100000263493.a.a.a.b.b.a.b.a.b ENSGT01030000234607.A.a.b.b ENSGT00510000049555 ENSGT00940000154078.b ENSGT00390000017193 Rhesus MODERN SPECIES 1 SIRPB2 (ENSMMUG00000015993) ENSMMUG00000061976 ENSMMUG00000037684 SIRPG (ENSMMUG00000018473) ENSMMUG00000062541 ENSMMUG00000018474 PDYN (ENSMMUG00000009984) STK35 (ENSMMUG00000004305) TGM3 (ENSMMUG00000007819) TGM6 (ENSMMUG00000063469) SNRPB (ENSMMUG00000010050) ZNF343 (ENSMMUG00000010054) TMC2 (ENSMMUG00000013889) NOP56 (ENSMMUG00000013888) IDH3B (ENSMMUG00000021328) EBF4 (ENSMMUG00000021331) ##22 CPXM1 (ENSMMUG00000021332) C10H20orf141 (ENSMMUG00000009331) PCED1A (ENSMMUG00000005200) VPS16 (ENSMMUG00000005204) PTPRA (ENSMMUG00000005878) GNRH2 (ENSMMUG00000005890) MRPS26 (ENSMMUG00000063622) OXT (ENSMMUG00000010678) AVP (ENSMMUG00000051923) ENSMMUG00000063464 FASTKD5 (ENSMMUG00000002982) UBOX5 (ENSMMUG00000043281) LZTS3 (ENSMMUG00000010028) DDRGK1 (ENSMMUG00000063520) ITPA (ENSMMUG00000061481) Crab-eating macaque MODERN SPECIES 1 ENSMFAG00000041667 ENSMFAG00000040668 RPL29 (ENSMFAG00000065377) ENSMFAG00000000677 SIRPA (ENSMFAG00000042179) PDYN (ENSMFAG00000059850) STK35 (ENSMFAG00000017416) TGM3 (ENSMFAG00000001294) TGM6 (ENSMFAG00000028501) SNRPB (ENSMFAG00000042411) ZNF343 (ENSMFAG00000033379) TMC2 (ENSMFAG00000044034) NOP56 (ENSMFAG00000041293) IDH3B (ENSMFAG00000031070) ENSMFAG00000056579 EBF4 (ENSMFAG00000032117) ##22 CPXM1 (ENSMFAG00000003356) C20orf141 (ENSMFAG00000003999) TMEM239 (ENSMFAG00000034564) PCED1A (ENSMFAG00000032941) VPS16 (ENSMFAG00000033888) PTPRA (ENSMFAG00000033743) GNRH2 (ENSMFAG00000065333) MRPS26 (ENSMFAG00000029490) OXT (ENSMFAG00000039947) AVP (ENSMFAG00000038251) ENSMFAG00000048486 FASTKD5 (ENSMFAG00000059621) UBOX5 (ENSMFAG00000041627) LZTS3 (ENSMFAG00000041543) DDRGK1 (ENSMFAG00000037803) Hominoidea ANCESTRAL SPECIES 17 ENSGT00960000186656.a.a.b ENSGT00960000186656.a.a.a.a.a.b.l.d ENSGT00960000186656.a.a.a.a.a.b.k ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.l.c ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT00940000164774 ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00910000147235 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.b ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 Gibbon MODERN SPECIES 3 SIRPD (ENSNLEG00000009332) ENSNLEG00000030706 SIRPG (ENSNLEG00000009322) ENSNLEG00000027626 ENSNLEG00000009297 PDYN (ENSNLEG00000009288) STK35 (ENSNLEG00000009281) TGM3 (ENSNLEG00000009248) TGM6 (ENSNLEG00000009234) SNRPB (ENSNLEG00000029067) ENSNLEG00000034418 ZNF343 (ENSNLEG00000009203) TMC2 (ENSNLEG00000009192) NOP56 (ENSNLEG00000009178) IDH3B (ENSNLEG00000009124) EBF4 (ENSNLEG00000009110) ##22 CPXM1 (ENSNLEG00000009078) C20orf141 (ENSNLEG00000009075) ENSNLEG00000035344 ENSNLEG00000009073 ENSNLEG00000009065 PTPRA (ENSNLEG00000007558) GNRH2 (ENSNLEG00000007569) MRPS26 (ENSNLEG00000027041) OXT (ENSNLEG00000007574) AVP (ENSNLEG00000007575) ENSNLEG00000031559 FASTKD5 (ENSNLEG00000007580) LZTS3 (ENSNLEG00000007581) DDRGK1 (ENSNLEG00000027534) ITPA (ENSNLEG00000007585) Hominidae ANCESTRAL SPECIES 18 ENSGT00960000186656.a.a.b ENSGT00960000186656.a.a.a.a.a.b.l.d ENSGT00960000186656.a.a.a.a.a.b.k ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.l.c ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT00940000164774 ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00910000147235 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.b ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 Orangutan MODERN SPECIES 11 SIRPB2 (ENSPPYG00000010850) ENSPPYG00000010849 ENSPPYG00000010848 SIRPG (ENSPPYG00000010847) ENSPPYG00000035480 ENSPPYG00000029662 PDYN (ENSPPYG00000041266) STK35 (ENSPPYG00000010844) TGM3 (ENSPPYG00000010843) TGM6 (ENSPPYG00000010842) SNRPB (ENSPPYG00000010841) ZNF343 (ENSPPYG00000010840) TMC2 (ENSPPYG00000010839) NOP56 (ENSPPYG00000010838) IDH3B (ENSPPYG00000010837) EBF4 (ENSPPYG00000010836) ##22 CPXM1 (ENSPPYG00000010835) ENSPPYG00000010834 PCED1A (ENSPPYG00000010833) VPS16 (ENSPPYG00000010832) PTPRA (ENSPPYG00000010831) GNRH2 (ENSPPYG00000010830) MRPS26 (ENSPPYG00000010829) OXT (ENSPPYG00000010828) AVP (ENSPPYG00000010827) UBOX5 (ENSPPYG00000010825) FASTKD5 (ENSPPYG00000037409) LZTS3 (ENSPPYG00000010824) DDRGK1 (ENSPPYG00000010823) ITPA (ENSPPYG00000010822) SLC4A11 (ENSPPYG00000010821) Homo/Pan/Gorilla group ANCESTRAL SPECIES 16 ENSGT00960000186656.a.a.b ENSGT00960000186656.a.a.a.a.a.b.l.c.d ENSGT00960000186656.a.a.a.a.a.b.k ENSGT00960000186656.a.a.a.a.b ENSGT00960000186656.a.a.a.a.a.b.l.c.c ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT00940000164774 ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00910000147235 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.b ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 Gorilla MODERN SPECIES 11 SIRPD (ENSGGOG00000011798) ENSGGOG00000040262 ENSGGOG00000043770 SIRPG (ENSGGOG00000037655) ENSGGOG00000040241 SIRPA (ENSGGOG00000022094) PDYN (ENSGGOG00000004354) STK35 (ENSGGOG00000004854) TGM6 (ENSGGOG00000016126) SNRPB (ENSGGOG00000016138) ENSGGOG00000040402 ZNF343 (ENSGGOG00000005326) TMC2 (ENSGGOG00000007013) NOP56 (ENSGGOG00000002886) IDH3B (ENSGGOG00000010029) EBF4 (ENSGGOG00000015503) ##22 ENSGGOG00000038341 CPXM1 (ENSGGOG00000007734) C20orf141 (ENSGGOG00000044039) ENSGGOG00000041500 PCED1A (ENSGGOG00000016118) VPS16 (ENSGGOG00000016124) PTPRA (ENSGGOG00000005074) MRPS26 (ENSGGOG00000005088) ENSGGOG00000011857 AVP (ENSGGOG00000027655) UBOX5 (ENSGGOG00000008641) LZTS3 (ENSGGOG00000008647) DDRGK1 (ENSGGOG00000008733) ITPA (ENSGGOG00000008741) SLC4A11 (ENSGGOG00000011941) Homo/Pan group ANCESTRAL SPECIES 17 ENSGT00960000186656.a.b ENSGT00960000186656.a.a.b ENSGT00960000186656.a.a.a.a.a.b.l.c.d ENSGT00960000186656.a.a.a.a.a.b.k ENSGT00960000186656.a.a.a.a.a.b.l.c.c ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT00940000164774 ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00910000147235 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.b ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 Human MODERN SPECIES 12 SIRPD (ENSG00000125900) ENSG00000260861 SIRPB1 (ENSG00000101307) SIRPG (ENSG00000089012) SIRPA (ENSG00000198053) PDYN (ENSG00000101327) STK35 (ENSG00000125834) ENSG00000286022 TGM3 (ENSG00000125780) TGM6 (ENSG00000166948) SNRPB (ENSG00000125835) ZNF343 (ENSG00000088876) TMC2 (ENSG00000149488) NOP56 (ENSG00000101361) IDH3B (ENSG00000101365) EBF4 (ENSG00000088881) ##22 CPXM1 (ENSG00000088882) ENSG00000241690 C20orf141 (ENSG00000258713) TMEM239 (ENSG00000198326) PCED1A (ENSG00000132635) VPS16 (ENSG00000215305) PTPRA (ENSG00000132670) GNRH2 (ENSG00000125787) MRPS26 (ENSG00000125901) OXT (ENSG00000101405) AVP (ENSG00000101200) UBOX5 (ENSG00000185019) FASTKD5 (ENSG00000215251) LZTS3 (ENSG00000088899) DDRGK1 (ENSG00000198171) Pan ANCESTRAL SPECIES 15 ENSGT00960000186656.a.b ENSGT00960000186656.a.a.b ENSGT00960000186656.a.a.a.a.a.b.l.c.d ENSGT00960000186656.a.a.a.a.a.b.k ENSGT00960000186656.a.a.a.a.a.b.l.c.c ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT00940000164774 ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00910000147235 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.b ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Chimpanzee MODERN SPECIES 11 SIRPB2 (ENSPTRG00000013165) SIRPD (ENSPTRG00000013166) ENSPTRG00000044253 SIRPG (ENSPTRG00000047284) SIRPA (ENSPTRG00000013171) PDYN (ENSPTRG00000013172) STK35 (ENSPTRG00000013173) TGM3 (ENSPTRG00000013174) TGM6 (ENSPTRG00000013175) SNRPB (ENSPTRG00000013176) ENSPTRG00000044503 ZNF343 (ENSPTRG00000013177) TMC2 (ENSPTRG00000013178) NOP56 (ENSPTRG00000013179) IDH3B (ENSPTRG00000013180) EBF4 (ENSPTRG00000039291) ##22 ENSPTRG00000043018 CPXM1 (ENSPTRG00000013182) C20H20orf141 (ENSPTRG00000013183) TMEM239 (ENSPTRG00000045802) PCED1A (ENSPTRG00000013185) VPS16 (ENSPTRG00000013186) PTPRA (ENSPTRG00000033879) GNRH2P (ENSPTRG00000013187) MRPS26 (ENSPTRG00000013188) OXT (ENSPTRG00000013189) AVP (ENSPTRG00000013190) UBOX5 (ENSPTRG00000013191) LZTS3 (ENSPTRG00000013192) DDRGK1 (ENSPTRG00000022696) ITPA (ENSPTRG00000013194) Bonobo DUPLICATION Bonobo MODERN SPECIES 11 ENSPPAG00000029190 SIRPG (ENSPPAG00000029659) SIRPA (ENSPPAG00000030631) PDYN (ENSPPAG00000031221) STK35 (ENSPPAG00000031479) TGM3 (ENSPPAG00000031787) TGM6 (ENSPPAG00000033831) SNRPB (ENSPPAG00000036314) ENSPPAG00000042022 ZNF343 (ENSPPAG00000017593) TMC2 (ENSPPAG00000027274) NOP56 (ENSPPAG00000027513) IDH3B (ENSPPAG00000028742) ENSPPAG00000028388 ##22 ENSPPAG00000031408 ENSPPAG00000033649 ##22 CPXM1 (ENSPPAG00000036363) C20orf141 (ENSPPAG00000032615) ENSPPAG00000033975 PCED1A (ENSPPAG00000035453) VPS16 (ENSPPAG00000036219) PTPRA (ENSPPAG00000027097) ENSPPAG00000028687 ENSPPAG00000028910 UBOX5 (ENSPPAG00000029443) LZTS3 (ENSPPAG00000031124) DDRGK1 (ENSPPAG00000033842) ITPA (ENSPPAG00000035696) SLC4A11 (ENSPPAG00000037992) DNAAF9 (ENSPPAG00000029181) ENSPPAG00000039267 Bonobo MODERN SPECIES 11 SIRPD (ENSPPAG00000028803) SIRPB1 (ENSPPAG00000028995) ENSPPAG00000029190 SIRPG (ENSPPAG00000029659) SIRPA (ENSPPAG00000030631) PDYN (ENSPPAG00000031221) STK35 (ENSPPAG00000031479) TGM3 (ENSPPAG00000031787) TGM6 (ENSPPAG00000033831) SNRPB (ENSPPAG00000036314) ENSPPAG00000042022 ZNF343 (ENSPPAG00000017593) TMC2 (ENSPPAG00000027274) NOP56 (ENSPPAG00000027513) IDH3B (ENSPPAG00000028742) ENSPPAG00000028388 ##22 ENSPPAG00000031408 ENSPPAG00000033649 ##22 CPXM1 (ENSPPAG00000036363) C20orf141 (ENSPPAG00000032615) ENSPPAG00000033975 PCED1A (ENSPPAG00000035453) VPS16 (ENSPPAG00000036219) PTPRA (ENSPPAG00000027097) ENSPPAG00000028687 ENSPPAG00000028910 UBOX5 (ENSPPAG00000029443) LZTS3 (ENSPPAG00000031124) DDRGK1 (ENSPPAG00000033842) ITPA (ENSPPAG00000035696) SLC4A11 (ENSPPAG00000037992) Strepsirrhini ANCESTRAL SPECIES 12 ENSGT00520000055634.b ENSGT00940000161179 ENSGT00940000153311.a.b.a ENSGT00520000055567.a.a.a ENSGT00960000186656.a.b ENSGT00960000186656.a.a.a.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT01080000258042 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Lemuriformes ANCESTRAL SPECIES 10 ENSGT00940000161638 ENSGT00940000161179 ENSGT00940000153311.a.b.a.bb.a ENSGT00520000055567.a.a.a ENSGT00960000186656.a.b ENSGT00960000186656.a.a.a.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT01080000258042 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 Lemuriformes_a ANCESTRAL SPECIES 26 ENSGT00940000161638 ENSGT00940000161179 ENSGT00940000153311.a.b.a.bb.a ENSGT00520000055567.a.a.a ENSGT00960000186656.a.b ENSGT00960000186656.a.a.a.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052.e.a ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00910000144368 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT01080000258042 ENSGT00390000008453 ENSGT00390000004511.d.a.a ENSGT00390000004511.d.a.b Greater bamboo lemur MODERN SPECIES 96 ENSPSMG00000017205 ENSPSMG00000017231 PDYN (ENSPSMG00000017243) STK35 (ENSPSMG00000017254) TGM3 (ENSPSMG00000017266) TGM6 (ENSPSMG00000017309) ENSPSMG00000017334 ZNF343 (ENSPSMG00000017340) TMC2 (ENSPSMG00000017350) NOP56 (ENSPSMG00000017382) IDH3B (ENSPSMG00000017432) EBF4 (ENSPSMG00000017514) ##22 CPXM1 (ENSPSMG00000017523) C20orf141 (ENSPSMG00000017528) TMEM239 (ENSPSMG00000017537) PCED1A (ENSPSMG00000017549) VPS16 (ENSPSMG00000017621) PTPRA (ENSPSMG00000017772) ENSPSMG00000017828 MRPS26 (ENSPSMG00000017831) Coquerels sifaka MODERN SPECIES 126 ENSPCOG00000016961 NSFL1C (ENSPCOG00000017539) SIRPB2 (ENSPCOG00000021097) SIRPD (ENSPCOG00000005070) ENSPCOG00000021831 ENSPCOG00000015731 PDYN (ENSPCOG00000014429) STK35 (ENSPCOG00000025368) TGM3 (ENSPCOG00000014223) TGM6 (ENSPCOG00000015730) SNRPB (ENSPCOG00000013686) ZNF343 (ENSPCOG00000028005) TMC2 (ENSPCOG00000021212) NOP56 (ENSPCOG00000024681) IDH3B (ENSPCOG00000027224) EBF4 (ENSPCOG00000024579) ##22 CPXM1 (ENSPCOG00000018297) C20orf141 (ENSPCOG00000015244) TMEM239 (ENSPCOG00000027957) PCED1A (ENSPCOG00000028602) VPS16 (ENSPCOG00000027991) PTPRA (ENSPCOG00000026502) ENSPCOG00000019699 MRPS26 (ENSPCOG00000021945) ENSPCOG00000014878 AVP (ENSPCOG00000021593) Mouse lemur MODERN SPECIES 9 SIRPB2 (ENSMICG00000002528) ENSMICG00000033053 ENSMICG00000014412 ENSMICG00000041445 PDYN (ENSMICG00000031304) STK35 (ENSMICG00000036350) ENSMICG00000035984 TGM3 (ENSMICG00000003703) TGM6 (ENSMICG00000016494) ENSMICG00000016519 ENSMICG00000044209 ZNF343 (ENSMICG00000016529) TMC2 (ENSMICG00000016538) NOP56 (ENSMICG00000016553) ENSMICG00000016560 EBF4 (ENSMICG00000016566) ##22 CPXM1 (ENSMICG00000016572) C20orf141 (ENSMICG00000043953) TMEM239 (ENSMICG00000016576) PCED1A (ENSMICG00000016578) VPS16 (ENSMICG00000016588) PTPRA (ENSMICG00000029145) ENSMICG00000013781 MRPS26 (ENSMICG00000013793) ENSMICG00000035095 AVP (ENSMICG00000026411) UBOX5 (ENSMICG00000028718) LZTS3 (ENSMICG00000013812) DDRGK1 (ENSMICG00000013816) ITPA (ENSMICG00000013833) SLC4A11 (ENSMICG00000013842) Bushbaby MODERN SPECIES 140 BCL2L1 (ENSOGAG00000012419) ENSOGAG00000029303 ENSOGAG00000024851 ENSOGAG00000014581 ENSOGAG00000027552 ENSOGAG00000029222 ENSOGAG00000017054 PDYN (ENSOGAG00000033058) STK35 (ENSOGAG00000017059) TGM6 (ENSOGAG00000004674) SNRPB (ENSOGAG00000016149) ZNF343 (ENSOGAG00000033365) TMC2 (ENSOGAG00000004678) NOP56 (ENSOGAG00000004681) IDH3B (ENSOGAG00000004684) EBF4 (ENSOGAG00000004688) ##22 CPXM1 (ENSOGAG00000004692) TMEM239 (ENSOGAG00000004697) PCED1A (ENSOGAG00000004701) VPS16 (ENSOGAG00000004705) PTPRA (ENSOGAG00000031085) MRPS26 (ENSOGAG00000025385) ENSOGAG00000001617 AVP (ENSOGAG00000001892) UBOX5 (ENSOGAG00000032968) FASTKD5 (ENSOGAG00000031350) LZTS3 (ENSOGAG00000001893) DDRGK1 (ENSOGAG00000001895) ITPA (ENSOGAG00000001900) SLC4A11 (ENSOGAG00000034582) DNAAF9 (ENSOGAG00000001901) Atlantogenata ANCESTRAL SPECIES 6 ENSGT00940000153311.a.b.a ENSGT00520000055567.a.a.a ENSGT00960000186656.a.b ENSGT00960000186656.a.a.a.b ENSGT00960000186656.a.a.b ENSGT00960000186656.a.a.a.a.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052 ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00940000165014 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 ENSGT00940000154894 Xenarthra ANCESTRAL SPECIES 139 ENSGT01050000244942.b.a.b ENSGT00950000182989.D.a.b ENSGT00940000153534.B ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000008453 ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 ENSGT00940000154894 ENSGT00390000003692 ENSGT00940000157346 Armadillo DUPLICATION Armadillo MODERN SPECIES 2615 ENSDNOG00000033366 IDH3B (ENSDNOG00000013719) NOP56 (ENSDNOG00000042962) EBF4 (ENSDNOG00000049548) ##22 CPXM1 (ENSDNOG00000031264) ENSDNOG00000035811 PCED1A (ENSDNOG00000036389) VPS16 (ENSDNOG00000015591) PTPRA (ENSDNOG00000025457) MRPS26 (ENSDNOG00000024910) ENSDNOG00000041696 Armadillo MODERN SPECIES 1477 ENSDNOG00000042184 ##22 Afrotheria ANCESTRAL SPECIES 3 ENSGT00520000055634.b ENSGT00940000161179 ENSGT00940000153311.a.b.a ENSGT00520000055567.a.a.a ENSGT00960000186656.a.b ENSGT00960000186656.a.a.a.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052 ENSGT00940000163290 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00940000165014 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 ENSGT00940000154894 ENSGT00940000168737 Tenrec MODERN SPECIES 8926 NOP56 (ENSETEG00000015951) ENSETEG00000015956 ##22 CPXM1 (ENSETEG00000015962) PCED1A (ENSETEG00000015965) VPS16 (ENSETEG00000015972) Afrotheria_a ANCESTRAL SPECIES 3 ENSGT00940000161638 ENSGT00520000055634.b ENSGT00940000161179 ENSGT00940000153311.a.b.a ENSGT00520000055567.a.a.a ENSGT00960000186656.a.b ENSGT00960000186656.a.a.a.b ENSGT00950000183149.B ENSGT00940000158197 ENSGT01050000244866.A.a.a.a.b ENSGT01050000244866.A.a.a.a.a ENSGT00940000155052 ENSGT01050000244942.b.a.b ENSGT00940000153534.B ENSGT00950000182989.D.a.b ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00940000165014 ENSGT00390000005090 ENSGT00390000002231.c ENSGT00390000003896 ENSGT00940000159585 ENSGT00390000005119 ENSGT00390000008453 ENSGT00390000004511.d.a.b ENSGT00510000049555 ENSGT00940000154078.b ENSGT00390000017193 ENSGT00390000015399 ENSGT00940000154894 ENSGT00940000168737 Elephant MODERN SPECIES 180 NSFL1C (ENSLAFG00000001678) SIRPB2 (ENSLAFG00000010283) ENSLAFG00000025598 ENSLAFG00000029135 ENSLAFG00000013244 ENSLAFG00000027376 ENSLAFG00000011047 PDYN (ENSLAFG00000012785) STK35 (ENSLAFG00000003808) TGM3 (ENSLAFG00000012764) TGM6 (ENSLAFG00000025825) SNRPB (ENSLAFG00000017588) TMC2 (ENSLAFG00000011689) NOP56 (ENSLAFG00000001406) IDH3B (ENSLAFG00000001405) EBF4 (ENSLAFG00000006892) ##22 CPXM1 (ENSLAFG00000006896) ENSLAFG00000030276 TMEM239 (ENSLAFG00000021744) PCED1A (ENSLAFG00000006903) VPS16 (ENSLAFG00000006906) PTPRA (ENSLAFG00000020650) GNRH2 (ENSLAFG00000028526) MRPS26 (ENSLAFG00000007936) AVP (ENSLAFG00000007073) UBOX5 (ENSLAFG00000020804) LZTS3 (ENSLAFG00000008808) DDRGK1 (ENSLAFG00000007847) ITPA (ENSLAFG00000002995) SLC4A11 (ENSLAFG00000030582) ENSLAFG00000025878 Hyrax MODERN SPECIES 7693 EBF4 (ENSPCAG00000011947) ##22 CPXM1 (ENSPCAG00000012075) Platypus MODERN SPECIES 15 PCGF1 (ENSOANG00000036465) ENSOANG00000045381 LBX2 (ENSOANG00000049763) ENSOANG00000037928 ENSOANG00000044725 ENSOANG00000041149 ENSOANG00000050731 INO80B (ENSOANG00000021297) RTKN (ENSOANG00000036121) WDR54 (ENSOANG00000032117) ENSOANG00000043880 ENSOANG00000010769 DCTN1 (ENSOANG00000043915) NOP56 (ENSOANG00000000505) IDH3B (ENSOANG00000040580) EBF4 (ENSOANG00000039383) ##22 ENSOANG00000015728 ENSOANG00000015729 ENSOANG00000046567 ENSOANG00000008753 ENSOANG00000047233 ENSOANG00000035907 ENSOANG00000008827 ENSOANG00000038007 ATRN (ENSOANG00000000438) DNAAF9 (ENSOANG00000048814) ENSOANG00000009320 DDRGK1 (ENSOANG00000048367) LZTS3 (ENSOANG00000020000) ENSOANG00000051112 UBOX5 (ENSOANG00000013034) Sauria ANCESTRAL SPECIES 6 ENSGT00390000017284.a.b ENSGT00510000047418 ENSGT00390000010888 ENSGT00390000005650 ENSGT00510000048167.b.a ENSGT00940000161413 ENSGT00940000161043 ENSGT00960000189762 ENSGT01100000263535.a.a ENSGT00940000159032 ENSGT00390000008711 ENSGT00910000144159.A.a ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000165044 ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00950000182932.A.b.a.a.a ENSGT00950000182932.A.b.a.a.b ENSGT00390000002231.e ENSGT00390000003896 Archelosauria ANCESTRAL SPECIES 4 ENSGT00390000017284.a.b ENSGT00510000047418 ENSGT00390000010888 ENSGT00390000005650 ENSGT00980000198740 ENSGT00940000161413 ENSGT00940000161043 ENSGT00960000189762 ENSGT01100000263535.a.a ENSGT00940000159032 ENSGT00390000008711 ENSGT00910000144159.A.a ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000165044 ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00950000182932.A.b.a.a.a ENSGT00950000182932.A.b.a.a.b ENSGT00390000002231.e ENSGT00390000003896 ENSGT00950000182989.D.a.b ENSGT00940000153534.B ENSGT00940000155378.d ENSGT01030000235337 ENSGT00940000163763 ENSGT00390000014979 ENSGT00390000014530 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000158491 Cryptodira ANCESTRAL SPECIES 2 ENSGT00940000156187 ENSGT00940000153322.A ENSGT00390000017284.a.b ENSGT00510000047418 ENSGT00390000010888 ENSGT00390000005650 ENSGT00940000161413 ENSGT00940000161043 ENSGT01100000263535.a.a ENSGT00940000159032 ENSGT00390000008711 ENSGT00910000144159.A.a ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000165044 ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00950000182932.A.b.a.a.a ENSGT00950000182932.A.b.a.a.b ENSGT00390000002231.e ENSGT00390000003896 ENSGT00950000182989.D.a.b ENSGT00940000153534.B ENSGT00940000155378.d ENSGT01030000235337 ENSGT00940000163763 ENSGT00390000014979 ENSGT00390000014530 ENSGT00940000164944 ENSGT00940000158491 ENSGT00390000001754 Testudinoidea ANCESTRAL SPECIES 37 ENSGT00940000156187 ENSGT00940000153322.A ENSGT00390000017284.a.b ENSGT00510000047418 ENSGT00390000010888 ENSGT00390000005650 ENSGT00940000161413 ENSGT00940000161043 ENSGT01100000263535.a.a ENSGT00940000159032 ENSGT00390000008711 ENSGT00910000144159.A.a ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000165044 ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00950000182932.A.b.a.a.a ENSGT00950000182932.A.b.a.a.b ENSGT00390000002231.e ENSGT00390000003896 ENSGT00950000182989.D.a.b ENSGT00940000153534.B ENSGT00940000155378.d ENSGT01030000235337 ENSGT00940000163763 ENSGT00390000014979 ENSGT00390000014530 ENSGT00940000164944.b ENSGT00940000158491 ENSGT00390000001754 Testudinidae ANCESTRAL SPECIES 56 ENSGT00390000017284.a.b ENSGT00510000047418 ENSGT00390000010888 ENSGT00390000005650 ENSGT00940000161043 ENSGT01100000263535.a.a ENSGT00940000159032 ENSGT00390000008711 ENSGT00910000144159.A.a ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000165044 ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00950000182932.A.b.a.a.a ENSGT00950000182932.A.b.a.a.b.d ENSGT00950000182932.A.b.a.a.b.c ENSGT00390000002231.e ENSGT00390000003896 ENSGT00950000182989.D.a.b ENSGT00940000153534.B ENSGT00940000155378.d ENSGT01030000235337 ENSGT00940000163763 ENSGT00390000014979 ENSGT00390000014530 ENSGT00940000164944.b ENSGT00940000158491 Abingdon island giant tortoise DUPLICATION Abingdon island giant tortoise MODERN SPECIES 2470 ENSCABG00000009640 ENSCABG00000009639 ##22 ENSCABG00000009637 ##22 Abingdon island giant tortoise MODERN SPECIES 2470 ENSCABG00000009640 ENSCABG00000009639 ##22 ENSCABG00000009637 ##22 Goode s thornscrub tortoise MODERN SPECIES 19 ENSGEVG00005014275 ENSGEVG00005014198 TEX261 (ENSGEVG00005014128) ENSGEVG00005013866 VAX2 (ENSGEVG00005013800) SIGLEC1 (ENSGEVG00005012651) HSPA12B (ENSGEVG00005012123) ADISSP (ENSGEVG00005012030) SPEF1 (ENSGEVG00005011959) CDC25B (ENSGEVG00005011877) ENSGEVG00005011828 AP5S1 (ENSGEVG00005011806) ENSGEVG00005011781 ENSGEVG00005011725 ENSGEVG00005011677 EBF4 (ENSGEVG00005011197) ##22 CPXM1 (ENSGEVG00005010062) ENSGEVG00005009899 ENSGEVG00005009718 ENSGEVG00005009684 ENSGEVG00005009629 VPS16 (ENSGEVG00005009585) IDH3B (ENSGEVG00005009547) NOP56 (ENSGEVG00005009468) DCTN1 (ENSGEVG00005009398) ENSGEVG00005009335 ENSGEVG00005009297 C2orf81 (ENSGEVG00005009250) WDR54 (ENSGEVG00005009226) ENSGEVG00005009189 ENSGEVG00005009154 Emydidae ANCESTRAL SPECIES 181 ENSGT00940000163615.B.a.d.b ENSGT00940000165044 ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00950000182932.A.b.a.a.a painted turtle MODERN SPECIES 902 ENSCPBG00000024253 ENSCPBG00000024254 EBF4 (ENSCPBG00000024276) ##22 VPS16 (ENSCPBG00000024419) NOP56 (ENSCPBG00000024420) DCTN1 (ENSCPBG00000024423) ENSCPBG00000024427 ENSCPBG00000024429 ENSCPBG00000024430 ENSCPBG00000024433 WDR54 (ENSCPBG00000024434) ENSCPBG00000024437 RTKN (ENSCPBG00000024442) INO80B (ENSCPBG00000024445) WBP1 (ENSCPBG00000024447) MOGS (ENSCPBG00000024448) ENSCPBG00000024450 ENSCPBG00000024452 Three-toed box turtle MODERN SPECIES 185 ENSTMTG00000014103 ENSTMTG00000014095 EBF4 (ENSTMTG00000013928) ##22 CPXM1 (ENSTMTG00000013910) ENSTMTG00000013900 Archosauria ANCESTRAL SPECIES 1 ENSGT00940000153322.A ENSGT00390000017284.a.b ENSGT00510000047418 ENSGT00390000010888 ENSGT00980000198740 ENSGT00940000161413 ENSGT00940000161043 ENSGT00960000189762 ENSGT01100000263535.a.a ENSGT00940000159032 ENSGT00390000008711 ENSGT00910000144159.A.a ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000165044 ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00950000182932.A.b.a.b ENSGT00390000003896 ENSGT00950000182989.D.a.b ENSGT00940000153534.B ENSGT00940000155378.d ENSGT01030000235337 ENSGT00940000163763 ENSGT00940000167385 ENSGT00390000014530 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000158491 ENSGT00390000001754 ENSGT00950000183109.d Aves ANCESTRAL SPECIES 3 ENSGT00940000153322.A ENSGT00390000017284.a.b ENSGT00510000047418 ENSGT00390000010888 ENSGT00980000198740 ENSGT00940000161413 ENSGT00940000161043 ENSGT00960000189762 ENSGT01100000263535.a.a ENSGT00940000159032 ENSGT00390000008711 ENSGT00910000144159.A.a ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000165044 ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00950000182932.A.b.a.b ENSGT00390000003896 ENSGT00950000182989.D.a.b ENSGT00940000153534.B ENSGT00940000155378.d ENSGT01030000235337 ENSGT00940000163763 ENSGT00940000167385 ENSGT00390000014530 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000158491 ENSGT00390000001754 ENSGT00950000183109.d Neognathae ANCESTRAL SPECIES 5 ENSGT00940000153322.A.ab ENSGT00390000017284.a.b ENSGT00510000047418 ENSGT00390000010888 ENSGT00980000198740 ENSGT00940000161413 ENSGT00940000161043 ENSGT00960000189762.a ENSGT01100000263535.a.a ENSGT00940000159032 ENSGT00390000008711 ENSGT00910000144159.A.a ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000165044 ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00950000182932.A.b.a.b ENSGT00390000003896 ENSGT00950000182989.D.a.b ENSGT00940000153534.B ENSGT00940000155378.d ENSGT01030000235337 ENSGT00940000163763 ENSGT00940000167385 ENSGT00390000014530 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000158491 ENSGT00390000001754 ENSGT00950000183109.d Galloanserae ANCESTRAL SPECIES 5 ENSGT00940000156187 ENSGT00940000153322.A.`b.a ENSGT00510000047418 ENSGT00390000010888 ENSGT00980000198740 ENSGT00940000161413 ENSGT00940000161043 ENSGT01100000263535.a.a ENSGT00940000159032 ENSGT00390000008711 ENSGT00910000144159.A.a ENSGT00940000171460 ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000165044 ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00950000182932.A.b.a.b ENSGT00390000003896 ENSGT00950000182989.D.a.b ENSGT00940000153534.B ENSGT00940000155378.d ENSGT01030000235337 ENSGT00940000163763 ENSGT00940000167385 ENSGT00390000014530 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000158491 ENSGT00390000001754 ENSGT00940000167728 Anatidae ANCESTRAL SPECIES 93 ENSGT00390000017284.a.b ENSGT00390000010888 ENSGT00980000198740 ENSGT00940000161413 ENSGT00940000161043 ENSGT01100000263535.a.a ENSGT00940000159032 ENSGT00390000008711 ENSGT00940000171460 ENSGT00940000158524 ENSGT00940000165044 ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00950000182932.A.b.a.b ENSGT00390000003896 ENSGT00950000182989.D.a.b ENSGT00940000153534.B ENSGT00940000155378.d ENSGT01030000235337 ENSGT00940000163763 Pink-footed goose MODERN SPECIES 380 PAIP2B (ENSABRG00000012155) ENSABRG00000012157 TEX261 (ENSABRG00000012160) ENSABRG00000012170 ATP6V1B1 (ENSABRG00000012191) VAX2 (ENSABRG00000012216) SIGLEC1 (ENSABRG00000012222) HSPA12B (ENSABRG00000012248) ADISSP (ENSABRG00000012280) ENSABRG00000012287 CDC25B (ENSABRG00000012309) ENSABRG00000012340 EBF4 (ENSABRG00000012429) ##22 ENSABRG00000013114 ENSABRG00000013117 VPS16 (ENSABRG00000013124) IDH3B (ENSABRG00000013135) NOP56 (ENSABRG00000013144) DCTN1 (ENSABRG00000013242) ENSABRG00000013296 ENSABRG00000013300 WDR54 (ENSABRG00000013308) ENSABRG00000013309 ENSABRG00000013325 Duck MODERN SPECIES 2274 EBF4 (ENSAPLG00000018245) ##22 Phasianidae ANCESTRAL SPECIES 35 ENSGT00390000010888 ENSGT00510000047418 ENSGT00940000153322.A.`b.a ENSGT00940000165044 ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00950000182932.A.b.a.b ENSGT00390000003896 ENSGT00950000182989.D.a.b ENSGT00940000153534.B ENSGT00940000155378.d ENSGT01030000235337 ENSGT00940000163763 ENSGT00940000167385 ENSGT00390000014530 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000158491 ENSGT00940000167728 ENSGT00950000183109.d Phasianidae_b ANCESTRAL SPECIES 41 ENSGT00510000047418 ENSGT00940000153322.A.`b.a ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00950000182932.A.b.a.b ENSGT00390000003896 ENSGT00950000182989.D.a.b ENSGT00940000153534.B ENSGT00940000155378.d ENSGT01030000235337 ENSGT00940000163763 ENSGT00940000167385 ENSGT00390000014530 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000158491 ENSGT00940000167728 ENSGT00950000183109.d Chicken MODERN SPECIES 33 GNOT2 (ENSGALG00010018266) RAB11FIP5 (ENSGALG00010018302) SFXN5 (ENSGALG00010018344) EMX1 (ENSGALG00010018362) SPR (ENSGALG00010018385) EXOC6B (ENSGALG00010018410) CYP26B1 (ENSGALG00010018425) DYSF (ENSGALG00010018466) ENSGALG00010018495 ENSGALG00010018500 ENSGALG00010018545 ENSGALG00010018506 ENSGALG00010018521 ENSGALG00010018536 ENSGALG00010015915 EBF4 (ENSGALG00010016322) ##22 ENSGALG00010018538 CPXM1 (ENSGALG00010017399) ENSGALG00010017422 ENSGALG00010017414 NAT8B (ENSGALG00010017502) VPS16 (ENSGALG00010005978) IDH3B (ENSGALG00010005984) NOP56 (ENSGALG00010006001) DCTN1 (ENSGALG00010005337) ENSGALG00010006021 ENSGALG00010006038 ENSGALG00010006055 ENSGALG00010006060 WDR54 (ENSGALG00010006065) ENSGALG00010006072 Japanese quail MODERN SPECIES 34 ENSCJPG00005006719 ENSCJPG00005006723 NAGK (ENSCJPG00005006725) ENSCJPG00005006728 ENSCJPG00005006738 ADISSP (ENSCJPG00005006808) CDC25B (ENSCJPG00005006810) ENSCJPG00005006812 EBF4 (ENSCJPG00005006815) ##22 CPXM1 (ENSCJPG00005006816) ENSCJPG00005006817 ENSCJPG00005006818 VPS16 (ENSCJPG00005006819) IDH3B (ENSCJPG00005006821) NOP56 (ENSCJPG00005006827) DCTN1 (ENSCJPG00005006847) ENSCJPG00005006853 ENSCJPG00005006854 WDR54 (ENSCJPG00005006855) ENSCJPG00005006856 ENSCJPG00005006858 RTKN (ENSCJPG00005006867) ENSCJPG00005006871 WBP1 (ENSCJPG00005006874) Neognathae_b ANCESTRAL SPECIES 4 ENSGT00940000153322.A.ab ENSGT00390000017284.a.b ENSGT00510000047418 ENSGT00390000010888 ENSGT00980000198740 ENSGT00510000048167.b.a ENSGT00940000161413 ENSGT00940000161043 ENSGT00960000189762.a ENSGT01100000263535.a.a ENSGT00940000159032 ENSGT00390000008711 ENSGT00910000144159.A.a ENSGT00940000158524 ENSGT00390000013178 ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00950000182932.A.b.a.b ENSGT00390000003896 ENSGT00950000182989.D.a.b ENSGT00940000153534.B ENSGT00940000155378.d ENSGT01030000235337 ENSGT00940000163763 ENSGT00940000167385 ENSGT00390000014530 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000158491 ENSGT00940000167728 ENSGT00390000001754 Passeriformes ANCESTRAL SPECIES 4 ENSGT00950000182989.D.a.b ENSGT00390000003896 ENSGT00950000182932.A.b.a.b ENSGT00940000156141.C ENSGT00940000153322.A.`b.a ENSGT00390000017284.a.b ENSGT00510000047418 ENSGT00390000010888 ENSGT00940000161413 ENSGT00940000161043 ENSGT00960000189762.a ENSGT01100000263535.a.a ENSGT00940000159032 ENSGT00390000008711 ENSGT00910000144159.A.a ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156187 ENSGT00800000124060.A.a ENSGT00390000005739.a.a ENSGT00440000033609 ENSGT00940000161476 ENSGT01030000234641.a.a ENSGT00940000158783.j ENSGT00940000158783.i.a ENSGT00940000154361.B ENSGT00510000047420 ENSGT00390000009837 ENSGT00550000074832 ENSGT00530000063713.b.a.g ENSGT00530000063713.b.a.h ENSGT00940000162199 Great tit MODERN SPECIES 23 SPR (ENSPMJG00000000078) EMX1 (ENSPMJG00000019542) SFXN5 (ENSPMJG00000019541) VAX2 (ENSPMJG00000019538) ENSPMJG00000019537 ENSPMJG00000019536 HSPA12B (ENSPMJG00000019534) ADISSP (ENSPMJG00000019533) SPEF1 (ENSPMJG00000019532) ENSPMJG00000019531 ENSPMJG00000019530 ##22 ENSPMJG00000019529 ##22 DYSF (ENSPMJG00000018671) CYP26B1 (ENSPMJG00000018667) ENSPMJG00000018664 EXOC6B (ENSPMJG00000018663) ENSPMJG00000018662 INO80B (ENSPMJG00000018661) WBP1 (ENSPMJG00000018660) MOGS (ENSPMJG00000018659) CCDC142 (ENSPMJG00000018658) ENSPMJG00000018657 LBX2 (ENSPMJG00000018656) PCGF1 (ENSPMJG00000018655) ENSPMJG00000018654 ENSPMJG00000018653 DQX1 (ENSPMJG00000018652) Passeriformes_d ANCESTRAL SPECIES 4 ENSGT00950000182989.D.a.b ENSGT00390000003896 ENSGT00950000182932.A.b.a.b ENSGT00940000156141.C ENSGT00940000153322.A.`b.b ENSGT00940000153322.A.`b.a ENSGT00390000017284.a.b ENSGT00510000047418 ENSGT00390000010888 ENSGT00940000161413 ENSGT00940000161043 ENSGT01100000263535.a.a ENSGT00940000159032 ENSGT00390000008711 ENSGT00910000144159.A.a ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156187 ENSGT00800000124060.A.a ENSGT00390000005739.a.a ENSGT00440000033609 ENSGT00940000161476 ENSGT01030000234641.a.a ENSGT00940000158783.j ENSGT00940000158783.i.a ENSGT00940000154361.B ENSGT00510000047420 ENSGT00390000009837 ENSGT00550000074832 ENSGT00530000063713.b.a.g ENSGT00530000063713.b.a.h ENSGT00940000162199 Flycatcher MODERN SPECIES 268 ENSFALG00000023442 ##22 ENSFALG00000010935 ENSFALG00000010878 ENSFALG00000010867 Passeriformes_g ANCESTRAL SPECIES 5 ENSGT00390000003896 ENSGT00950000182932.A.b.a.b ENSGT00940000156141.C ENSGT00940000153322.A.`b.b ENSGT00940000153322.A.`b.a ENSGT00390000017284.a.b ENSGT00510000047418 ENSGT00390000010888 ENSGT00940000161413 ENSGT00940000161043 ENSGT00960000189762.a ENSGT01100000263535.a.a ENSGT00940000159032 ENSGT00390000008711 ENSGT00910000144159.A.a ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156187 ENSGT00800000124060.A.a ENSGT00390000005739.a.a ENSGT00440000033609 ENSGT00940000161476 ENSGT01030000234641.a.a ENSGT00940000158783.i.b ENSGT00510000047420 ENSGT00390000009837 ENSGT00550000074832 ENSGT00530000063713.b.a.g ENSGT00530000063713.b.a.h ENSGT00940000162199 ENSGT00940000158971 ENSGT00940000160491 Passeroidea ANCESTRAL SPECIES 4 ENSGT00950000182989.D.a.b ENSGT00950000182932.A.b.a.b ENSGT00940000156141.C ENSGT00940000153322.A.`b.b ENSGT00940000153322.A.`b.a ENSGT00390000017284.a.b ENSGT00510000047418 ENSGT00390000010888 ENSGT00940000161413 ENSGT00940000161043 ENSGT00960000189762.a ENSGT01100000263535.a.a ENSGT00940000159032 ENSGT00390000008711 ENSGT00910000144159.A.a ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156187 ENSGT00800000124060.A.a ENSGT00390000005739.a.a ENSGT00440000033609 ENSGT00940000161476 ENSGT01030000234641.a.a ENSGT00940000158783.i.b ENSGT00510000047420 ENSGT00390000009837 ENSGT00550000074832 ENSGT00530000063713.b.a.g ENSGT00530000063713.b.a.h ENSGT00940000162199 ENSGT00940000158971 ENSGT00940000160491 Zebra finch MODERN SPECIES 25 ENSTGUG00000027254 CPXM1 (ENSTGUG00000020261) ENSTGUG00000019911 ENSTGUG00000014566 ENSTGUG00000022611 ENSTGUG00000024296 NAGK (ENSTGUG00000020972) TEX261 (ENSTGUG00000026476) ATP6V1B1 (ENSTGUG00000017296) VAX2 (ENSTGUG00000014757) SIGLEC1 (ENSTGUG00000016383) ENSTGUG00000028681 HSPA12B (ENSTGUG00000029036) C4H20orf27 (ENSTGUG00000029136) SPEF1 (ENSTGUG00000021168) EBF4 (ENSTGUG00000023041) ##22 DYSF (ENSTGUG00000015557) CYP26B1 (ENSTGUG00000029374) ENSTGUG00000028265 ENSTGUG00000029577 ENSTGUG00000026873 ENSTGUG00000025867 ENSTGUG00000019090 ENSTGUG00000021645 ENSTGUG00000025586 ENSTGUG00000025354 ENSTGUG00000019785 ENSTGUG00000015491 ENSTGUG00000022247 ENSTGUG00000024799 ENSTGUG00000015459 Medium ground finch MODERN SPECIES 379 ENSGFOG00000012687 ##22 DYSF (ENSGFOG00000012073) Neognathae_c ANCESTRAL SPECIES 3 ENSGT00940000153322.A.ab ENSGT00390000017284.a.b ENSGT00510000047418 ENSGT00390000010888 ENSGT00980000198740 ENSGT00510000048167.b.a ENSGT00940000161413 ENSGT00940000161043 ENSGT01100000263535.a.a ENSGT00940000159032 ENSGT00390000008711 ENSGT00910000144159.A.a ENSGT00940000158524 ENSGT00390000013178 ENSGT00990000210209 ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C.n ENSGT00950000182932.A.b.a.b ENSGT00390000003896 ENSGT00950000182989.D.a.b ENSGT00940000153534.B ENSGT00940000155378.d ENSGT01030000235337 ENSGT00940000163763 ENSGT00940000167385 ENSGT00390000014530 ENSGT00940000164944 Kakapo MODERN SPECIES 24 PAIP2B (ENSSHBG00005012094) NAGK (ENSSHBG00005012077) TEX261 (ENSSHBG00005012047) ENSSHBG00005012016 ENSSHBG00005011990 VAX2 (ENSSHBG00005011973) SIGLEC1 (ENSSHBG00005011760) HSPA12B (ENSSHBG00005011630) ADISSP (ENSSHBG00005011603) SPEF1 (ENSSHBG00005011589) CDC25B (ENSSHBG00005011569) ENSSHBG00005011538 ENSSHBG00005011523 ENSSHBG00005011509 ENSSHBG00005011473 EBF4 (ENSSHBG00005011424) ##22 ENSSHBG00005011334 ENSSHBG00005011292 ENSSHBG00005011275 ENSSHBG00005011256 ENSSHBG00005011227 VPS16 (ENSSHBG00005010338) IDH3B (ENSSHBG00005010147) NOP56 (ENSSHBG00005004944) DCTN1 (ENSSHBG00005004907) ENSSHBG00005004891 ENSSHBG00005004886 ENSSHBG00005004884 WDR54 (ENSSHBG00005004879) ENSSHBG00005004876 Golden eagle MODERN SPECIES ENSACCG00020000002 ENSACCG00020000003 ENSACCG00020000004 EBF4 (ENSACCG00020000005) ##22 ENSACCG00020000006 ENSACCG00020000007 AP5S1 (ENSACCG00020000008) CDC25B (ENSACCG00020000009) SPEF1 (ENSACCG00020000010) ADISSP (ENSACCG00020000011) HSPA12B (ENSACCG00020000012) SIGLEC1 (ENSACCG00020000013) VAX2 (ENSACCG00020000014) ENSACCG00020000015 ATP6V1B1 (ENSACCG00020000016) ENSACCG00020000017 TEX261 (ENSACCG00020000018) NAGK (ENSACCG00020000019) PAIP2B (ENSACCG00020000020) Lepidosauria ANCESTRAL SPECIES 25 ENSGT00390000017284.a.b ENSGT00510000047418 ENSGT00390000010888 ENSGT00390000005650 ENSGT00510000048167.b.a ENSGT00940000161413 ENSGT00940000161043 ENSGT00960000189762 ENSGT01100000263535.a.a ENSGT00940000159032 ENSGT00390000008711 ENSGT00910000144159.A.a ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000165044 ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00950000182932.A.b.a.a.a ENSGT00950000182932.A.b.a.a.b ENSGT00390000002231.e ENSGT00390000002231.f ENSGT00390000003896 ENSGT00510000047420 ENSGT00390000009837 ENSGT00550000074832 ENSGT00530000063713.b.a ENSGT00940000162199 ENSGT00940000179269 ENSGT00940000153123.B ENSGT00940000158971 ENSGT00940000160491 tuatara MODERN SPECIES 436 ENSSPUG00000006690 ENSSPUG00000006698 ##22 Episquamata ANCESTRAL SPECIES 3 ENSGT00390000017284.a.b ENSGT00510000047418 ENSGT00390000010888 ENSGT00390000005650 ENSGT00510000048167.b.a ENSGT00940000161413 ENSGT00940000161043 ENSGT00960000189762 ENSGT01100000263535.a.a ENSGT00940000159032 ENSGT00390000008711 ENSGT00910000144159.A.a ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000165044 ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00950000182932.A.b.a.a.a ENSGT00950000182932.A.b.a.a.b ENSGT00390000002231.e ENSGT00390000002231.f ENSGT00390000003896 ENSGT00510000047420 ENSGT00390000009837 ENSGT00550000074832 ENSGT00530000063713.b.a ENSGT00940000162199 ENSGT00940000153123.B ENSGT00940000158971 ENSGT00940000160491 ENSGT00940000157346 Laterata ANCESTRAL SPECIES 9 ENSGT00390000017284.a.b ENSGT00510000047418 ENSGT00390000010888 ENSGT00390000005650 ENSGT00510000048167.b.a ENSGT00940000161413 ENSGT00940000161043 ENSGT00960000189762 ENSGT01100000263535.a.a ENSGT00940000159032 ENSGT00390000008711 ENSGT00910000144159.A.a ENSGT00940000158524 ENSGT00390000013178 ENSGT00940000165044 ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00950000182932.A.b.a.a.a ENSGT00950000182932.A.b.a.a.b ENSGT00390000002231.e ENSGT00390000003896 ENSGT00510000047420 ENSGT00390000009837 ENSGT00550000074832.db.b ENSGT00530000063713.b.a ENSGT00940000162199 ENSGT00940000153123.B ENSGT00940000158971 ENSGT00940000160491 ENSGT00940000157346 ENSGT00390000003692 Argentine black and white tegu MODERN SPECIES 71 ENSSMRG00000000415 ENSSMRG00000000392 ENSSMRG00000000364 EBF4 (ENSSMRG00000000310) ##22 CPXM1 (ENSSMRG00000000237) ENSSMRG00000000233 ENSSMRG00000000221 ENSSMRG00000000209 ENSSMRG00000000183 ENSSMRG00000000181 VPS16 (ENSSMRG00000000098) SMYD5 (ENSSMRG00000000050) PRADC1 (ENSSMRG00000000043) CCT7 (ENSSMRG00000018128) FBXO41 (ENSSMRG00000018125) EGR4 (ENSSMRG00000018124) ENSSMRG00000018119 ADAM33 (ENSSMRG00000018115) GFRA4 (ENSSMRG00000018110) Common wall lizard MODERN SPECIES 17 HSPA12B (ENSPMRG00000010720) ADISSP (ENSPMRG00000010712) SPEF1 (ENSPMRG00000010699) CDC25B (ENSPMRG00000010656) AP5S1 (ENSPMRG00000010640) ENSPMRG00000010632 ENSPMRG00000010630 ENSPMRG00000010626 ENSPMRG00000010620 ENSPMRG00000010616 ENSPMRG00000010612 ENSPMRG00000010606 ENSPMRG00000010599 ENSPMRG00000010595 ENSPMRG00000010575 EBF4 (ENSPMRG00000010529) ##22 CPXM1 (ENSPMRG00000010506) ENSPMRG00000010498 ENSPMRG00000010494 ENSPMRG00000010452 ENSPMRG00000010428 VPS16 (ENSPMRG00000010405) SMYD5 (ENSPMRG00000010384) PRADC1 (ENSPMRG00000010372) ENSPMRG00000010354 ENSPMRG00000010474 EGR4 (ENSPMRG00000010467) ENSPMRG00000010461 ADAM33 (ENSPMRG00000010438) ENSPMRG00000010422 GFRA4 (ENSPMRG00000010413) Toxicofera ANCESTRAL SPECIES 12 ENSGT00940000165044 ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00950000182932.A.b.a.a.a ENSGT00390000002231.f ENSGT00390000003896 ENSGT00510000047420 ENSGT00390000009837 ENSGT00550000074832 ENSGT00530000063713.b.a ENSGT00940000162199 ENSGT00940000160491 ENSGT00940000157346 ENSGT00390000003692 ENSGT00940000165596 ENSGT00940000154894 ENSGT01010000222287.B.a.a.b Lizard MODERN SPECIES 1303 ENSACAG00000038665 ##22 ENSACAG00000000222 ENSACAG00000044164 ENSACAG00000016550 ENSACAG00000000213 Elapidae ANCESTRAL SPECIES 61 ENSGT00940000165044 ENSGT00950000182859.A.a.a.a ##22 ENSGT00940000156141.C ENSGT00950000182932.A.b.a.a.a ENSGT00390000002231.f ENSGT00390000003896 ENSGT00510000047420 ENSGT00390000009837 ENSGT00550000074832 ENSGT00530000063713.b.a ENSGT00940000162199 ENSGT00940000160491 ENSGT00940000157346 ENSGT00390000003692 ENSGT00940000165600 ENSGT00940000168737 Indian cobra MODERN SPECIES 3 ENSNNAG00000011624 ENSNNAG00000011738 EBF4 (ENSNNAG00000011811) ##22 ENSNNAG00000011950 ENSNNAG00000013351 VPS16 (ENSNNAG00000013429) SMYD5 (ENSNNAG00000013589) PRADC1 (ENSNNAG00000013603) CCT7 (ENSNNAG00000013625) FBXO41 (ENSNNAG00000013678) EGR4 (ENSNNAG00000013718) ATRN (ENSNNAG00000013763) DNAAF9 (ENSNNAG00000013829) ENSNNAG00000014064 HSPA12B (ENSNNAG00000014085) ENSNNAG00000014094 ENSNNAG00000014157 ENSNNAG00000014318 Elapidae_a DUPLICATION Elapidae_a DUPLICATION Elapidae_a ANCESTRAL SPECIES ENSGT00950000182859.A.a.a.a.db.a ##22 Acanthophiinae ANCESTRAL SPECIES ENSGT00950000182859.A.a.a.a.db.a ##22 Mainland tiger snake MODERN SPECIES 1152 ENSNSUG00000007409 ##22 Blue-lipped sea krait MODERN SPECIES 9904 ENSLLTG00000013310 ##22 Elapidae_a ANCESTRAL SPECIES ENSGT00950000182859.A.a.a.a.db.b ##22 Acanthophiinae ANCESTRAL SPECIES ENSGT00950000182859.A.a.a.a.db.b ##22 Mainland tiger snake MODERN SPECIES 1186 ENSNSUG00000009148 ##22 Elapidae_a ANCESTRAL SPECIES 171 ENSGT00940000165044 ENSGT00950000182859.A.a.a.a.eb ##22 ENSGT00390000003896 ENSGT00510000047420 ENSGT00390000009837 ENSGT00550000074832 ENSGT00530000063713.b.a ENSGT00940000162199 Acanthophiinae ANCESTRAL SPECIES 171 ENSGT00940000165044 ENSGT00950000182859.A.a.a.a.eb ##22 ENSGT00390000003896 ENSGT00390000009837 ENSGT00550000074832 ENSGT00530000063713.b.a ENSGT00940000162199 Mainland tiger snake MODERN SPECIES 2745 ENSNSUG00000004100 ##22 Eastern brown snake DUPLICATION Eastern brown snake MODERN SPECIES 203 ENSPTXG00000016235 ENSPTXG00000016247 ##22 VPS16 (ENSPTXG00000016256) PRADC1 (ENSPTXG00000016274) CCT7 (ENSPTXG00000016275) FBXO41 (ENSPTXG00000016276) EGR4 (ENSPTXG00000016278) Eastern brown snake MODERN SPECIES 1152 ENSPTXG00000015982 ##22