Laurasiatheria	ANCESTRAL SPECIES	24	ENSGT00950000185082	ENSGT00390000004380	ENSGT00940000158238 #7	ENSGT00530000063668.B #8	ENSGT00510000049722 #9	ENSGT00940000158614 #10	ENSGT00940000158299 #12	ENSGT00940000157269.a.a #13	ENSGT00940000160868 #14	ENSGT01030000234597.a.b.a #15	ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT01030000234522.C.b.e.a.a.b #18	ENSGT00390000013415.a.b #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #27	ENSGT00940000161685.A.a #28	ENSGT00940000154418.a.b	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930	ENSGT00940000158607 #35	ENSGT01100000263540.B.d
Laurasiatheria_a	ANCESTRAL SPECIES	8	ENSGT00950000185082	ENSGT00390000004380	ENSGT00940000158238 #7	ENSGT00530000063668.B #8	ENSGT00510000049722 #9	ENSGT00940000158614 #10	ENSGT00940000158299 #12	ENSGT00940000157269.a.a #13	ENSGT00940000160868 #14	ENSGT01030000234597.a.b.a #15	ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT01030000234522.C.b.e.a.a.b #18	ENSGT00390000013415.a.b #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00990000214190	ENSGT00940000156208 #27	ENSGT00940000161685.A.a #28	ENSGT00940000154418.a.b	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930	ENSGT00940000158607 #35
Artiodactyla	ANCESTRAL SPECIES	7	ENSGT00950000185082	ENSGT00390000004380	ENSGT00940000158238 #7	ENSGT00530000063668.B #8	ENSGT00510000049722 #9	ENSGT00940000158614 #10	ENSGT00940000158299 #12	ENSGT00940000157269.a.a #13	ENSGT00940000160868 #14	ENSGT01030000234597.a.b.a #15	ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT01030000234522.C.b.e.a.a.b #18	ENSGT00390000013415.a.b #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00990000214190	ENSGT00940000156208 #27	ENSGT00940000161685.A.a #28	ENSGT00940000154418.a.b	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930	ENSGT00940000158607 #35
Artiodactyla_a	ANCESTRAL SPECIES	6	ENSGT00940000158598	ENSGT00390000004380	ENSGT00940000158238 #7	ENSGT00530000063668.B #8	ENSGT00510000049722 #9	ENSGT00940000158614 #10	ENSGT00940000158299 #12	ENSGT00940000157269.a.a #13	ENSGT00940000160868 #14	ENSGT01030000234597.a.b.a #15	ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT01030000234522.C.b.e.a.a.b #18	ENSGT00390000013415.a.b #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00990000214190	ENSGT00940000156208 #27	ENSGT00940000161685.A.a #28	ENSGT00940000154418.a.b	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930	ENSGT00940000158607 #35
Artiodactyla_b	ANCESTRAL SPECIES	7	ENSGT00940000158598	ENSGT00390000004380	ENSGT00940000158238 #7	ENSGT00530000063668.B #8	ENSGT00510000049722 #9	ENSGT00940000158614 #10	ENSGT00940000158299 #12	ENSGT00940000157269.a.a #13	ENSGT00940000160868 #14	ENSGT01030000234597.a.b.a #15	ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT01030000234522.C.b.e.a.a.b #18	ENSGT00390000013415.a.b #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00990000214190	ENSGT00940000156208 #27	ENSGT00940000161685.A.a #28	ENSGT00940000154418.a.b	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930	ENSGT00940000158607 #35
Cetacea	ANCESTRAL SPECIES	9	ENSGT00390000004380	ENSGT00940000158238 #7	ENSGT00530000063668.B #8	ENSGT00510000049722 #9	ENSGT00940000158614 #10	ENSGT00390000006350.m.a.c.b.a.b #11	ENSGT00940000158299 #12	ENSGT00940000157269.a.a #13	ENSGT00940000160868 #14	ENSGT01030000234597.a.b.a #15	ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT01030000234522.C.b.e.a.a.b #18	ENSGT00390000013415.a.b #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #27	ENSGT00940000161685.A.a #28	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930	ENSGT00940000158607 #35	ENSGT01100000263540.B.d	ENSGT00940000155874
Odontoceti	ANCESTRAL SPECIES	8	ENSGT00390000004380	ENSGT00940000158238 #7	ENSGT00530000063668.B #8	ENSGT00510000049722 #9	ENSGT00940000158614 #10	ENSGT00390000006350.m.a.c.b.a.b #11	ENSGT00940000158299 #12	ENSGT00940000157269.a.a #13	ENSGT00940000160868 #14	ENSGT01030000234597.a.b.a #15	ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT01030000234522.C.b.e.a.a.b #18	ENSGT00390000013415.a.b #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #27	ENSGT00940000161685.A.a #28	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930	ENSGT00940000158607 #35	ENSGT01100000263540.B.d	ENSGT00940000155874
Odontoceti_a	ANCESTRAL SPECIES	15	ENSGT00390000004380	ENSGT00940000158238 #7	ENSGT00530000063668.B #8	ENSGT00510000049722 #9	ENSGT00940000158614 #10	ENSGT00390000006350.m.a.c.b.a.b #11	ENSGT00940000158299 #12	ENSGT00940000157269.a.a #13	ENSGT00940000160868 #14	ENSGT01030000234597.a.b.a #15	ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT01030000234522.C.b.e.a.a.b #18	ENSGT00390000013415.a.b #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #27	ENSGT00940000161685.A.a #28	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930	ENSGT00940000158607 #35	ENSGT01100000263540.B.d	ENSGT00940000155874
Odontoceti_b	ANCESTRAL SPECIES	8	ENSGT00940000158238 #7	ENSGT00530000063668.B #8	ENSGT00510000049722 #9	ENSGT00940000158614 #10	ENSGT00390000006350.m.a.c.b.a.b #11	ENSGT00940000158299 #12	ENSGT00940000157269.a.a #13	ENSGT00940000160868 #14	ENSGT01030000234597.a.b.a #15	ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT01030000234522.C.b.e.a.a.b #18	ENSGT00390000013415.a.b #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000183010.a.b.a.a.a.a.a.b.b.d #21	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #27	ENSGT00940000161685.A.a #28	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930	ENSGT00940000158607 #35	ENSGT01100000263540.B.d	ENSGT00940000155874
Monodontidae	ANCESTRAL SPECIES	5	ENSGT00940000158238 #7	ENSGT00530000063668.B #8	ENSGT00510000049722 #9	ENSGT00940000158614 #10	ENSGT00390000006350.m.a.c.b.a.b #11	ENSGT00940000158299 #12	ENSGT00940000157269.a.a #13	ENSGT00940000160868 #14	ENSGT01030000234597.a.b.a #15	ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT01030000234522.C.b.e.a.a.b #18	ENSGT00390000013415.a.b #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000183010.a.b.a.a.a.a.a.b.b.d #21	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #27	ENSGT00940000161685.A.a #28	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930	ENSGT00940000158607 #35	ENSGT01010000228881 #36	ENSGT01100000263540.B.d
Narwhal	MODERN SPECIES	312	SCARA3 (ENSMMNG00015017508) #7	CLU (ENSMMNG00015017554) #8	ENSMMNG00015017581 #9	EPHX2 (ENSMMNG00015017668) #10	ENSMMNG00015017835 #11	CHRNA2 (ENSMMNG00015017861) #12	PTK2B (ENSMMNG00015017976) #13	TRIM35 (ENSMMNG00015018089) #14	STMN4 (ENSMMNG00015018331) #15	ADRA1A (ENSMMNG00015018492) #16	DPYSL2 (ENSMMNG00015018544) #17	PNMA2 (ENSMMNG00015018639) #18	BNIP3L (ENSMMNG00015018649) #19	PPP2R2A (ENSMMNG00015018714) #20	ENSMMNG00015018827 #21	EBF2 (ENSMMNG00015018863) #22	CDCA2 (ENSMMNG00015018900) #23	KCTD9 (ENSMMNG00015019003) #24	GNRH1 (ENSMMNG00015019060) #25	DOCK5 (ENSMMNG00015019103) #26	NEFL (ENSMMNG00015019153) #27	ENSMMNG00015019196 #28	ENSMMNG00015019249 #29	ADAMDEC1 (ENSMMNG00015019319) #30	ADAM28 (ENSMMNG00015019400) #31	STC1 (ENSMMNG00015019502) #32	NKX2-6 (ENSMMNG00015019533) #33	ENSMMNG00015019551 #34	SLC25A37 (ENSMMNG00015019590) #35	ENSMMNG00015019603 #36	ENSMMNG00015019619 #37
Beluga whale	MODERN SPECIES	4	SCARA3 (ENSDLEG00000000924) #7	CLU (ENSDLEG00000000957) #8	ENSDLEG00000000969 #9	EPHX2 (ENSDLEG00000001005) #10	ENSDLEG00000001060 #11	CHRNA2 (ENSDLEG00000001068) #12	PTK2B (ENSDLEG00000001086) #13	TRIM35 (ENSDLEG00000001119) #14	STMN4 (ENSDLEG00000001142) #15	ADRA1A (ENSDLEG00000001167) #16	DPYSL2 (ENSDLEG00000001186) #17	PNMA2 (ENSDLEG00000001239) #18	BNIP3L (ENSDLEG00000001250) #19	PPP2R2A (ENSDLEG00000001272) #20	ENSDLEG00000001289 #21	EBF2 (ENSDLEG00000001316) #22	ENSDLEG00000001380	CDCA2 (ENSDLEG00000001385) #23	KCTD9 (ENSDLEG00000001415) #24	GNRH1 (ENSDLEG00000001435) #25	DOCK5 (ENSDLEG00000002343) #26	ENSDLEG00000006462	NEFL (ENSDLEG00000006467) #27	NEFM (ENSDLEG00000006476)	ADAM28 (ENSDLEG00000006489) #31	STC1 (ENSDLEG00000006517) #32	ENSDLEG00000006522 #33	NKX3-1 (ENSDLEG00000006531)	SLC25A37 (ENSDLEG00000006540) #35	ENSDLEG00000006543 #36	ENTPD4 (ENSDLEG00000006555)
Vaquita	MODERN SPECIES	17	ESCO2 (ENSPSNG00000012224)	CCDC25 (ENSPSNG00000012132)	SCARA3 (ENSPSNG00000011999) #7	CLU (ENSPSNG00000011914) #8	ENSPSNG00000011878 #9	CHRNA2 (ENSPSNG00000011813) #12	PTK2B (ENSPSNG00000011703) #13	TRIM35 (ENSPSNG00000011632) #14	STMN4 (ENSPSNG00000011305) #15	ADRA1A (ENSPSNG00000011198) #16	DPYSL2 (ENSPSNG00000010930) #17	PNMA2 (ENSPSNG00000010857) #18	BNIP3L (ENSPSNG00000010778) #19	PPP2R2A (ENSPSNG00000010594) #20	ENSPSNG00000010536 #21	EBF2 (ENSPSNG00000010256) #22	ENSPSNG00000010228	ENSPSNG00000010183	CDCA2 (ENSPSNG00000009875) #23	KCTD9 (ENSPSNG00000009803) #24	GNRH1 (ENSPSNG00000004028) #25	ENSPSNG00000003996	ENSPSNG00000003965	NEFL (ENSPSNG00000003946) #27	ENSPSNG00000003914 #28	ADAMDEC1 (ENSPSNG00000003873) #30	ADAM28 (ENSPSNG00000003790) #31	STC1 (ENSPSNG00000003726) #32	NKX2-6 (ENSPSNG00000003713) #33	NKX3-1 (ENSPSNG00000003693)	ENSPSNG00000003682
Dolphin	MODERN SPECIES	2887																EBF2 (ENSTTRG00000021467) #22
Sperm whale	MODERN SPECIES	20	PBK (ENSPCTG00005002003)	ESCO2 (ENSPCTG00005001985)	CCDC25 (ENSPCTG00005001956)	ENSPCTG00005001945 #11	EPHX2 (ENSPCTG00005001921) #10	CHRNA2 (ENSPCTG00005001881) #12	PTK2B (ENSPCTG00005001853) #13	TRIM35 (ENSPCTG00005001833) #14	STMN4 (ENSPCTG00005001782) #15	ENSPCTG00005001739	ADRA1A (ENSPCTG00005001727) #16	DPYSL2 (ENSPCTG00005001664) #17	PNMA2 (ENSPCTG00005001626) #18	BNIP3L (ENSPCTG00005001600) #19	PPP2R2A (ENSPCTG00005001540) #20	EBF2 (ENSPCTG00005001486) #22	ENSPCTG00005001468	CDCA2 (ENSPCTG00005001413) #23	KCTD9 (ENSPCTG00005001337) #24	GNRH1 (ENSPCTG00005001298) #25	DOCK5 (ENSPCTG00005001083) #26	NEFL (ENSPCTG00005001011) #27	NEFM (ENSPCTG00005000983)	ENSPCTG00005000957	ADAM7 (ENSPCTG00005000905) #29	ADAMDEC1 (ENSPCTG00005000843) #30	ADAM28 (ENSPCTG00005000741) #31	STC1 (ENSPCTG00005000557) #32	NKX2-6 (ENSPCTG00005000444) #33	NKX3-1 (ENSPCTG00005015538)	ENSPCTG00005015478
Blue whale	MODERN SPECIES	17	CCDC25 (ENSBMSG00010000771)	SCARA3 (ENSBMSG00010000815) #7	CLU (ENSBMSG00010000855) #8	ENSBMSG00010000884 #9	EPHX2 (ENSBMSG00010000918) #10	ENSBMSG00010000956 #11	CHRNA2 (ENSBMSG00010000975) #12	PTK2B (ENSBMSG00010001018) #13	TRIM35 (ENSBMSG00010001057) #14	STMN4 (ENSBMSG00010001170) #15	ADRA1A (ENSBMSG00010001276) #16	DPYSL2 (ENSBMSG00010001313) #17	PNMA2 (ENSBMSG00010001359) #18	ENSBMSG00010001374 #19	PPP2R2A (ENSBMSG00010001403) #20	EBF2 (ENSBMSG00010001470) #22	CDCA2 (ENSBMSG00010001504) #23	KCTD9 (ENSBMSG00010001525) #24	GNRH1 (ENSBMSG00010001589) #25	DOCK5 (ENSBMSG00010001626) #26	NEFL (ENSBMSG00010001677) #27	NEFM (ENSBMSG00010001692)	ENSBMSG00010001706	ENSBMSG00010001750 #29	ADAMDEC1 (ENSBMSG00010001768) #30	ENSBMSG00010001817 #31	STC1 (ENSBMSG00010001852) #32	NKX2-6 (ENSBMSG00010001859) #33	NKX3-1 (ENSBMSG00010001867)	SLC25A37 (ENSBMSG00010001881) #35	ENSBMSG00010001888 #36
Pecora	ANCESTRAL SPECIES	36	ENSGT00940000158598	ENSGT00390000004380	ENSGT00940000158238 #7	ENSGT00530000063668.B #8	ENSGT00510000049722 #9	ENSGT00940000158614 #10	ENSGT00940000158299 #12	ENSGT00940000157269.a.a #13	ENSGT00940000160868 #14	ENSGT01030000234597.a.b.a #15	ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT01030000234522.C.b.e.a.a.b #18	ENSGT00390000013415.a.b #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00990000214190	ENSGT00940000156208 #27	ENSGT00940000154418.a.b	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00940000154172.`b	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930	ENSGT00940000158607 #35
Percora_a	ANCESTRAL SPECIES	24	ENSGT00940000158598	ENSGT00390000004380	ENSGT00940000158238 #7	ENSGT00530000063668.B #8	ENSGT00510000049722 #9	ENSGT00940000158614 #10	ENSGT00940000158299 #12	ENSGT00940000157269.a.a #13	ENSGT00940000160868 #14	ENSGT01030000234597.a.b.a #15	ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT01030000234522.C.b.e.a.a.b #18	ENSGT00390000013415.a.b #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00990000214190	ENSGT00940000156208 #27	ENSGT00940000154418.a.b	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00940000154172.`b	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930	ENSGT00940000158607 #35
Bovidae	ANCESTRAL SPECIES	14	ENSGT00940000156806	ENSGT00530000063668.B.b #8	ENSGT00530000065109.h	ENSGT00510000048121.j	ENSGT00510000049722 #9	ENSGT00940000158614 #10	ENSGT00940000158299 #12	ENSGT00940000157269.a.a #13	ENSGT00940000160868 #14	ENSGT01030000234597.a.b.a #15	ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT01030000234522.C.b.e.a.a.b #18	ENSGT00390000013415.a.b #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00990000214190	ENSGT00940000156208 #27	ENSGT00940000154418.a.b	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00940000154172.`b	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930	ENSGT00940000158607 #35
Caprinae	ANCESTRAL SPECIES	14	ENSGT00940000153558.b.i.b.a.a.h	ENSGT00940000156806	ENSGT00530000063668.B.b #8	ENSGT00530000065109.h	ENSGT00510000049722 #9	ENSGT00940000158614 #10	ENSGT00940000158299 #12	ENSGT00940000157269.a.a #13	ENSGT00940000160868 #14	ENSGT01030000234597.a.b.a #15	ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT01030000234522.C.b.e.a.a.b #18	ENSGT00390000013415.a.b #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #27	ENSGT00940000154418.a.b	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930	ENSGT00940000158607 #35	ENSGT01100000263540.B.d	ENSGT00940000155874
Goat	MODERN SPECIES	27	APTX (ENSCHIG00000012896)	ENSCHIG00000020043 #8	ENSCHIG00000026235	ENSCHIG00000015473	ENSCHIG00000008405 #9	EPHX2 (ENSCHIG00000007111) #10	CHRNA2 (ENSCHIG00000018927) #12	PTK2B (ENSCHIG00000026234) #13	TRIM35 (ENSCHIG00000009723) #14	STMN4 (ENSCHIG00000020412) #15	ADRA1A (ENSCHIG00000021001) #16	DPYSL2 (ENSCHIG00000026845) #17	PNMA2 (ENSCHIG00000002000) #18	ENSCHIG00000024818 #19	PPP2R2A (ENSCHIG00000007473) #20	EBF2 (ENSCHIG00000023729) #22	CDCA2 (ENSCHIG00000018580) #23	KCTD9 (ENSCHIG00000015791) #24	GNRH1 (ENSCHIG00000016406) #25	DOCK5 (ENSCHIG00000001085) #26	NEFL (ENSCHIG00000011951) #27	NEFM (ENSCHIG00000019945)	ADAM7 (ENSCHIG00000015652) #29	ADAMDEC1 (ENSCHIG00000015701) #30	ADAM28 (ENSCHIG00000024308) #31	ENSCHIG00000012581	STC1 (ENSCHIG00000010708) #32	NKX2-6 (ENSCHIG00000023290) #33	NKX3-1 (ENSCHIG00000010463)	ENSCHIG00000009620	ENSCHIG00000010457
Rambouillet Sheep	MODERN SPECIES	11	APTX (ENSOARG00020011077)	ENSOARG00020011544 #8	ENSOARG00020011616	ENSOARG00020011644 #9	EPHX2 (ENSOARG00020011756) #10	CHRNA2 (ENSOARG00020011996) #12	PTK2B (ENSOARG00020012073) #13	TRIM35 (ENSOARG00020012904) #14	STMN4 (ENSOARG00020013017) #15	ADRA1A (ENSOARG00020013199) #16	ENSOARG00020013277	DPYSL2 (ENSOARG00020013413) #17	PNMA2 (ENSOARG00020013810) #18	ENSOARG00020013834 #19	PPP2R2A (ENSOARG00020013913) #20	EBF2 (ENSOARG00020014139) #22	CDCA2 (ENSOARG00020014388) #23	KCTD9 (ENSOARG00020014450) #24	DOCK5 (ENSOARG00020014672) #26	GNRH1 (ENSOARG00020017575) #25	NEFL (ENSOARG00020017673) #27	NEFM (ENSOARG00020017740)	ADAM7 (ENSOARG00020017810) #29	STC1 (ENSOARG00020019387) #32	NKX2-6 (ENSOARG00020019459) #33	NKX3-1 (ENSOARG00020019488)	SLC25A37 (ENSOARG00020019551) #35	ENTPD4 (ENSOARG00020019615)	ENSOARG00020019697	ENSOARG00020019730	RHOBTB2 (ENSOARG00020019759)
Bovinae	ANCESTRAL SPECIES	14	ENSGT00940000156806	ENSGT00530000063668.B.b #8	ENSGT00530000065109.h	ENSGT00510000048121.j	ENSGT00510000049722 #9	ENSGT00940000158614 #10	ENSGT00940000158299 #12	ENSGT00940000157269.a.a #13	ENSGT00940000160868 #14	ENSGT01030000234597.a.b.a #15	ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT01030000234522.C.b.e.a.a.b #18	ENSGT00390000013415.a.b #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00990000214190	ENSGT00940000156208 #27	ENSGT00940000154418.a.b	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00940000154172.`b	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930	ENSGT00940000158607 #35
Bos	ANCESTRAL SPECIES	10	ENSGT00940000156806	ENSGT00530000063668.B.b #8	ENSGT00530000065109.h	ENSGT00510000048121.j	ENSGT00510000049722 #9	ENSGT00940000158614 #10	ENSGT00940000158299 #12	ENSGT00940000157269.a.a #13	ENSGT00940000160868 #14	ENSGT01030000234597.a.b.a #15	ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT01030000234522.C.b.e.a.a.b #18	ENSGT00390000013415.a.b #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00990000214190	ENSGT00940000156208 #27	ENSGT00940000154418.a.b	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00940000154172.`b	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930	ENSGT00940000158607 #35
Bos_a	ANCESTRAL SPECIES	20	ENSGT00940000156806	ENSGT00530000063668.B.b #8	ENSGT00530000065109.h	ENSGT00510000048121.j	ENSGT00510000049722 #9	ENSGT00940000158614 #10	ENSGT00940000158299 #12	ENSGT00940000157269.a.a #13	ENSGT00940000160868 #14	ENSGT01030000234597.a.b.a #15	ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT01030000234522.C.b.e.a.a.b #18	ENSGT00390000013415.a.b #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00990000214190	ENSGT00940000156208 #27	ENSGT00940000154418.a.b	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00940000154172.`b	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930	ENSGT00940000158607 #35
Wild yak	MODERN SPECIES	1486	ENSBMUG00000017193	APTX (ENSBMUG00000017120)	ENSBMUG00000016995 #8	ENSBMUG00000016981	ENSBMUG00000016973 #9	EPHX2 (ENSBMUG00000016915) #10	CHRNA2 (ENSBMUG00000016831) #12	PTK2B (ENSBMUG00000016777) #13	TRIM35 (ENSBMUG00000016700) #14	STMN4 (ENSBMUG00000016672) #15	ADRA1A (ENSBMUG00000016609) #16	DPYSL2 (ENSBMUG00000016569) #17	PNMA2 (ENSBMUG00000016534) #18	BNIP3L (ENSBMUG00000016521) #19	PPP2R2A (ENSBMUG00000016501) #20	EBF2 (ENSBMUG00000016447) #22	CDCA2 (ENSBMUG00000016433) #23	KCTD9 (ENSBMUG00000016419) #24	GNRH1 (ENSBMUG00000016371) #25	DOCK5 (ENSBMUG00000016356) #26	NEFL (ENSBMUG00000016301) #27	NEFM (ENSBMUG00000016293)
Domestic yak	MODERN SPECIES	26	ENSBGRG00000001185 #8	ENSBGRG00000001154	ENSBGRG00000001133	ENSBGRG00000001069 #9	EPHX2 (ENSBGRG00000000999) #10	CHRNA2 (ENSBGRG00000000968) #12	PTK2B (ENSBGRG00000000804) #13	TRIM35 (ENSBGRG00000000766) #14	STMN4 (ENSBGRG00000000736) #15	ADRA1A (ENSBGRG00000000703) #16	DPYSL2 (ENSBGRG00000000520) #17	PNMA2 (ENSBGRG00000000490) #18	ENSBGRG00000000482	ENSBGRG00000000444 #19	PPP2R2A (ENSBGRG00000000395) #20	EBF2 (ENSBGRG00000017109) #22	CDCA2 (ENSBGRG00000016906) #23	KCTD9 (ENSBGRG00000016782) #24	GNRH1 (ENSBGRG00000016731) #25	DOCK5 (ENSBGRG00000015972) #26	ENSBGRG00000015920	NEFL (ENSBGRG00000015850) #27	NEFM (ENSBGRG00000015744)	ENSBGRG00000015724	ADAM7 (ENSBGRG00000014923) #29	ENSBGRG00000014430 #30	ENSBGRG00000014380	STC1 (ENSBGRG00000014320) #32	NKX2-6 (ENSBGRG00000014251) #33	NKX3-1 (ENSBGRG00000014189)	SLC25A37 (ENSBGRG00000014111) #35
Bos_b	ANCESTRAL SPECIES	3	ENSGT00940000155007	ENSGT00940000153558.b.i.b.a.a.h	ENSGT00940000156806	ENSGT00530000063668.B.b #8	ENSGT00510000049722 #9	ENSGT00940000158614 #10	ENSGT00940000158299 #12	ENSGT00940000157269.a.a #13	ENSGT00940000160868 #14	ENSGT01030000234597.a.b.a #15	ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT01030000234522.C.b.e.a.a.b #18	ENSGT00390000013415.a.b #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #27	ENSGT00940000161685.A.a #28	ENSGT00940000154418.a.b	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00950000183031.B.e.b.a.a.a	ENSGT00940000154172.`b	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930
Hybrid Bos Indicus	MODERN SPECIES	27	ENSBIXG00005022648	APTX (ENSBIXG00005022727)	ENSBIXG00005022965 #8	ENSBIXG00005023012	ENSBIXG00005007577 #9	EPHX2 (ENSBIXG00005023266) #10	ENSBIXG00005023343 #12	PTK2B (ENSBIXG00005023549) #13	TRIM35 (ENSBIXG00005023617) #14	STMN4 (ENSBIXG00005023682) #15	ADRA1A (ENSBIXG00005023744) #16	DPYSL2 (ENSBIXG00005004091) #17	PNMA2 (ENSBIXG00005023950) #18	ENSBIXG00005023958	PPP2R2A (ENSBIXG00005024066) #20	EBF2 (ENSBIXG00005024188) #22	CDCA2 (ENSBIXG00005024231) #23	KCTD9 (ENSBIXG00005004143) #24	GNRH1 (ENSBIXG00005024264) #25	DOCK5 (ENSBIXG00005024516) #26	NEFL (ENSBIXG00005024596) #27	NEFM (ENSBIXG00005002572)	ADAM7 (ENSBIXG00005024699) #29	ENSBIXG00005025151 #31	ENSBIXG00005025234	ENSBIXG00005004295	STC1 (ENSBIXG00005025303) #32	NKX2-6 (ENSBIXG00005025314) #33	NKX3-1 (ENSBIXG00005025337)	SLC25A37 (ENSBIXG00005025367) #35	LOXL2 (ENSBIXG00005025479)
Cow	MODERN SPECIES	27	SMU1 (ENSBTAG00000019564)	DNAJA1 (ENSBTAG00000016265)	APTX (ENSBTAG00000013947)	ENSBTAG00000015027 #8	GULO (ENSBTAG00000026748) #9	EPHX2 (ENSBTAG00000015241) #10	CHRNA2 (ENSBTAG00000002252) #12	PTK2B (ENSBTAG00000005958) #13	TRIM35 (ENSBTAG00000009958) #14	STMN4 (ENSBTAG00000017627) #15	ADRA1A (ENSBTAG00000031632) #16	DPYSL2 (ENSBTAG00000018373) #17	PNMA2 (ENSBTAG00000037986) #18	BNIP3L (ENSBTAG00000021307) #19	PPP2R2A (ENSBTAG00000018317) #20	EBF2 (ENSBTAG00000040390) #22	CDCA2 (ENSBTAG00000002756) #23	KCTD9 (ENSBTAG00000012382) #24	GNRH1 (ENSBTAG00000000164) #25	DOCK5 (ENSBTAG00000015513) #26	NEFL (ENSBTAG00000021949) #27	NEFM (ENSBTAG00000039530) #28	ADAM7 (ENSBTAG00000039171) #29	ADAMDEC1 (ENSBTAG00000001125) #30	ADAM28 (ENSBTAG00000037929) #31	ENSBTAG00000038064	ENSBTAG00000048755	STC1 (ENSBTAG00000001687) #32	ENSBTAG00000051369	NKX2-6 (ENSBTAG00000014008) #33	NKX3-1 (ENSBTAG00000001221)
American bison	MODERN SPECIES	3064	ENSBBBG00000011395	APTX (ENSBBBG00000011383)	ENSBBBG00000011270 #8	ENSBBBG00000007068 #9	EPHX2 (ENSBBBG00000011228) #10	CHRNA2 (ENSBBBG00000011130) #12	PTK2B (ENSBBBG00000002002) #13	ENSBBBG00000011020 #14	STMN4 (ENSBBBG00000011014) #15	ADRA1A (ENSBBBG00000001967) #16	DPYSL2 (ENSBBBG00000010977) #17	PNMA2 (ENSBBBG00000001944) #18	BNIP3L (ENSBBBG00000001943) #19	PPP2R2A (ENSBBBG00000010922) #20	ENSBBBG00000001938	EBF2 (ENSBBBG00000010900) #22	CDCA2 (ENSBBBG00000010883) #23	KCTD9 (ENSBBBG00000001907) #24	GNRH1 (ENSBBBG00000010860) #25	DOCK5 (ENSBBBG00000010849) #26	NEFM (ENSBBBG00000010802)	NEFL (ENSBBBG00000010785) #27
Siberian musk deer	MODERN SPECIES	327	ENSMMSG00000007188	ENSMMSG00000007169 #9	EPHX2 (ENSMMSG00000006938) #10	CHRNA2 (ENSMMSG00000006874) #12	PTK2B (ENSMMSG00000006593) #13	TRIM35 (ENSMMSG00000006491) #14	STMN4 (ENSMMSG00000006293) #15	ENSMMSG00000006276	ENSMMSG00000006269	ENSMMSG00000006250	ADRA1A (ENSMMSG00000006243) #16	ENSMMSG00000006237	DPYSL2 (ENSMMSG00000006136) #17	BNIP3L (ENSMMSG00000006092) #19	ENSMMSG00000005972 #20	EBF2 (ENSMMSG00000005908) #22	CDCA2 (ENSMMSG00000005842) #23	KCTD9 (ENSMMSG00000005761) #24	GNRH1 (ENSMMSG00000005726) #25	DOCK5 (ENSMMSG00000005425) #26	NEFL (ENSMMSG00000005342) #27	NEFM (ENSMMSG00000005289)	ADAM7 (ENSMMSG00000004688) #29	ADAMDEC1 (ENSMMSG00000004507) #30	ADAM28 (ENSMMSG00000004400) #31	ENSMMSG00000004334	ENSMMSG00000004320	STC1 (ENSMMSG00000013160) #32	NKX2-6 (ENSMMSG00000013148) #33	NKX3-1 (ENSMMSG00000013132)	SLC25A37 (ENSMMSG00000013114) #35
Yarkand deer	MODERN SPECIES	7	SPINK4 (ENSCHYG00000006676)	B4GALT1 (ENSCHYG00000006601)	SMU1 (ENSCHYG00000006551)	ENSCHYG00000006506	APTX (ENSCHYG00000006316)	ENSCHYG00000006124 #9	EPHX2 (ENSCHYG00000005702) #10	CHRNA2 (ENSCHYG00000005610) #12	PTK2B (ENSCHYG00000005281) #13	TRIM35 (ENSCHYG00000005184) #14	STMN4 (ENSCHYG00000005084) #15	ADRA1A (ENSCHYG00000004551) #16	DPYSL2 (ENSCHYG00000026867) #17	ENSCHYG00000026854 #19	ENSCHYG00000026841 #20	EBF2 (ENSCHYG00000026813) #22	CDCA2 (ENSCHYG00000026788) #23	KCTD9 (ENSCHYG00000026770) #24	GNRH1 (ENSCHYG00000026755) #25	DOCK5 (ENSCHYG00000026683) #26	NEFL (ENSCHYG00000026647) #27	NEFM (ENSCHYG00000026636)	ADAM7 (ENSCHYG00000026508) #29	ADAMDEC1 (ENSCHYG00000026439) #30	ADAM28 (ENSCHYG00000025837) #31	ENSCHYG00000025762	STC1 (ENSCHYG00000025743) #32	NKX2-6 (ENSCHYG00000025734) #33	NKX3-1 (ENSCHYG00000025709)	SLC25A37 (ENSCHYG00000025677) #35	ENTPD4 (ENSCHYG00000025626)
Camelidae	ANCESTRAL SPECIES	47	ENSGT00940000158598	ENSGT00390000004380	ENSGT00940000158238 #7	ENSGT00530000063668.B #8	ENSGT00510000049722 #9	ENSGT00940000158614 #10	ENSGT00940000158299 #12	ENSGT00940000157269.a.a #13	ENSGT00940000160868 #14	ENSGT01030000234597.a.b.a #15	ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT01030000234522.C.b.e.a.a.b #18	ENSGT00390000013415.a.b #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #27	ENSGT00940000161685.A.a #28	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930	ENSGT00940000158607 #35	ENSGT01100000263540.B.d	ENSGT00940000155874	ENSGT00530000063711.a	ENSGT00720000108860
Alpaca	MODERN SPECIES	2917														BNIP3L (ENSVPAG00000000509) #19	PPP2R2A (ENSVPAG00000015429) #20	EBF2 (ENSVPAG00000015422) #22
Arabian camel	MODERN SPECIES	24	SCARA3 (ENSCDRG00005019603) #7	CLU (ENSCDRG00005019585) #8	ENSCDRG00005019569 #9	EPHX2 (ENSCDRG00005019465) #10	CHRNA2 (ENSCDRG00005019402) #12	PTK2B (ENSCDRG00005019294) #13	TRIM35 (ENSCDRG00005019253) #14	STMN4 (ENSCDRG00005019200) #15	ENSCDRG00005019174	ADRA1A (ENSCDRG00005019146) #16	DPYSL2 (ENSCDRG00005018995) #17	PNMA2 (ENSCDRG00005018959) #18	BNIP3L (ENSCDRG00005018890) #19	PPP2R2A (ENSCDRG00005018721) #20	ENSCDRG00005018693	EBF2 (ENSCDRG00005018634) #22	CDCA2 (ENSCDRG00005018503) #23	KCTD9 (ENSCDRG00005018455) #24	GNRH1 (ENSCDRG00005018431) #25	DOCK5 (ENSCDRG00005018165) #26	NEFL (ENSCDRG00005018138) #27	ENSCDRG00005018075 #28	ADAM7 (ENSCDRG00005017257) #29	ADAM28 (ENSCDRG00005016471) #31	STC1 (ENSCDRG00005016415) #32	ENSCDRG00005016389 #33	NKX3-1 (ENSCDRG00005016364)	SLC25A37 (ENSCDRG00005016317) #35	ENTPD4 (ENSCDRG00005016214)	LOXL2 (ENSCDRG00005016177)	R3HCC1 (ENSCDRG00005016059)
Suina	ANCESTRAL SPECIES	42	ENSGT00950000185082	ENSGT00390000004380	ENSGT00940000158238 #7	ENSGT00530000063668.B #8	ENSGT00510000049722 #9	ENSGT00940000158614 #10	ENSGT00940000158299 #12	ENSGT00940000157269.a.a #13	ENSGT00940000160868 #14	ENSGT01030000234597.a.b.a #15	ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT01030000234522.C.b.e.a.a.b #18	ENSGT00390000013415.a.b #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #27	ENSGT00940000161685.A.a #28	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930	ENSGT00940000158607 #35	ENSGT01100000263540.B.d	ENSGT00940000155874
Chacoan peccary	MODERN SPECIES	813	ESCO2 (ENSCWAG00000009108)	CCDC25 (ENSCWAG00000009241)	SCARA3 (ENSCWAG00000009341) #7	CLU (ENSCWAG00000009499) #8	ENSCWAG00000009543 #9	EPHX2 (ENSCWAG00000009691) #10	CHRNA2 (ENSCWAG00000010830) #12	PTK2B (ENSCWAG00000011805) #13	TRIM35 (ENSCWAG00000011889) #14	STMN4 (ENSCWAG00000011950) #15	ADRA1A (ENSCWAG00000012091) #16	DPYSL2 (ENSCWAG00000012142) #17	PNMA2 (ENSCWAG00000012323) #18	BNIP3L (ENSCWAG00000012345) #19	PPP2R2A (ENSCWAG00000012404) #20	EBF2 (ENSCWAG00000012599) #22	CDCA2 (ENSCWAG00000012969) #23	KCTD9 (ENSCWAG00000013249) #24	GNRH1 (ENSCWAG00000013307) #25	DOCK5 (ENSCWAG00000013368) #26	NEFL (ENSCWAG00000013873) #27	ENSCWAG00000013920 #28	ADAM7 (ENSCWAG00000013998) #29	ADAMDEC1 (ENSCWAG00000014486) #30	ADAM28 (ENSCWAG00000014725) #31	STC1 (ENSCWAG00000014909) #32	NKX2-6 (ENSCWAG00000014986) #33	NKX3-1 (ENSCWAG00000015012)	SLC25A37 (ENSCWAG00000015044) #35	ENTPD4 (ENSCWAG00000015072)	LOXL2 (ENSCWAG00000015127)
Pig	MODERN SPECIES	5	ENSSSCG00000050594	CCDC25 (ENSSSCG00000024972)	SCARA3 (ENSSSCG00000020846) #7	CLU (ENSSSCG00000009668) #8	ENSSSCG00000009667 #9	EPHX2 (ENSSSCG00000009666) #10	CHRNA2 (ENSSSCG00000009665) #12	PTK2B (ENSSSCG00000009664) #13	TRIM35 (ENSSSCG00000033325) #14	STMN4 (ENSSSCG00000009662) #15	ADRA1A (ENSSSCG00000009661) #16	DPYSL2 (ENSSSCG00000030130) #17	PNMA2 (ENSSSCG00000009659) #18	BNIP3L (ENSSSCG00000009658) #19	PPP2R2A (ENSSSCG00000009657) #20	EBF2 (ENSSSCG00000009655) #22	ENSSSCG00000042774	CDCA2 (ENSSSCG00000009653) #23	KCTD9 (ENSSSCG00000009652) #24	GNRH1 (ENSSSCG00000009651) #25	DOCK5 (ENSSSCG00000009650) #26	NEFL (ENSSSCG00000009649) #27	ENSSSCG00000009648 #28	ENSSSCG00000060373	ENSSSCG00000057307	ADAM7 (ENSSSCG00000009646) #29	ADAMDEC1 (ENSSSCG00000009645) #30	ADAM28 (ENSSSCG00000009644) #31	STC1 (ENSSSCG00000009642) #32	NKX2-6 (ENSSSCG00000028064) #33	NKX3-1 (ENSSSCG00000031924)
Laurasiatheria_b	ANCESTRAL SPECIES	8	ENSGT00940000158598	ENSGT00390000004380	ENSGT00940000158238 #7	ENSGT00530000063668.B #8	ENSGT00510000049722 #9	ENSGT00940000158614 #10	ENSGT00940000158299 #12	ENSGT00940000157269.a.a #13	ENSGT00940000160868 #14	ENSGT01030000234597.a.b.a #15	ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT01030000234522.C.b.e.a.a.b #18	ENSGT00390000013415.a.b #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00990000214190	ENSGT00940000156208 #27	ENSGT00940000161685.A.a #28	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930	ENSGT00940000158607 #35	ENSGT01100000263540.B.d
Carnivora	ANCESTRAL SPECIES	5	ENSGT00940000158598	ENSGT00390000004380	ENSGT00940000158238 #7	ENSGT00530000063668.B #8	ENSGT00510000049722 #9	ENSGT00940000158614 #10	ENSGT00940000158299 #12	ENSGT00940000157269.a.a #13	ENSGT00940000160868 #14	ENSGT01030000234597.a.b.a #15	ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT01030000234522.C.b.e.a.a.b #18	ENSGT00390000013415.a.b.q.a #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #27	ENSGT00940000161685.A.a #28	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930	ENSGT00940000158607 #35	ENSGT01100000263540.B.d	ENSGT00940000155874
Caniformia	ANCESTRAL SPECIES	7	ENSGT00390000004380	ENSGT00940000158238 #7	ENSGT00530000063668.B #8	ENSGT00510000049722 #9	ENSGT00940000158614 #10	ENSGT00940000158299 #12	ENSGT00940000157269.a.a #13	ENSGT00940000160868 #14	ENSGT01030000234597.a.b.a #15	ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT00390000013415.a.b.q.b #19	ENSGT01030000234522.C.b.e.a.a.b #18	ENSGT00390000013415.a.b.q.a #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #27	ENSGT00940000161685.A.a #28	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930	ENSGT00940000158607 #35	ENSGT01100000263540.B.d	ENSGT00940000155874
Caniformia_b	ANCESTRAL SPECIES	5	ENSGT00940000158238 #7	ENSGT00530000063668.B #8	ENSGT00510000049722 #9	ENSGT00940000158614 #10	ENSGT00940000158299 #12	ENSGT00940000157269.a.a #13	ENSGT00940000160868 #14	ENSGT01030000234597.a.b.a #15	ENSGT00390000000378.d.b.db.b	ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT00390000013415.a.b.q.b #19	ENSGT01030000234522.C.b.e.a.a.b #18	ENSGT00390000013415.a.b.q.a.b #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #27	ENSGT00940000161685.A.a #28	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930	ENSGT00940000158607 #35	ENSGT01100000263540.B.d	ENSGT00940000155874
Ursidae	ANCESTRAL SPECIES	50										ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT00390000013415.a.b.q.b #19	ENSGT01030000234522.C.b.e.a.a.b #18	ENSGT00390000013415.a.b.q.a.b #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #27	ENSGT00940000161685.A.a #28	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930	ENSGT00940000158607 #35	ENSGT01100000263540.B.d	ENSGT00940000155874
Ursus	ANCESTRAL SPECIES	126												ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT00390000013415.a.b.q.b #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #27	ENSGT00940000161685.A.a #28	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000158607 #35	ENSGT01100000263540.B.d	ENSGT00940000155874	ENSGT00530000063711.a	ENSGT00720000108860
American black bear	MODERN SPECIES	941															PPP2R2A (ENSUAMG00000020589) #20	EBF2 (ENSUAMG00000020544) #22
Polar bear	MODERN SPECIES	242												ADRA1A (ENSUMAG00000003460) #16	DPYSL2 (ENSUMAG00000003466) #17	BNIP3L (ENSUMAG00000003506) #19	PPP2R2A (ENSUMAG00000003521) #20	EBF2 (ENSUMAG00000003592) #22	ENSUMAG00000004389 #23	ENSUMAG00000004393 #23	KCTD9 (ENSUMAG00000004405) #24	GNRH1 (ENSUMAG00000004411) #25	ENSUMAG00000004417 #26	ENSUMAG00000004442 #26	ENSUMAG00000004621	NEFL (ENSUMAG00000004623) #27	ENSUMAG00000004628 #28	ADAM7 (ENSUMAG00000004656) #29	ADAMDEC1 (ENSUMAG00000004698) #30	ADAM28 (ENSUMAG00000004702) #31	STC1 (ENSUMAG00000004720) #32	SLC25A37 (ENSUMAG00000004734) #35	ENTPD4 (ENSUMAG00000004742)
Giant Panda	MODERN SPECIES	15	NOP10 (ENSAMEG00000026587)	ENSAMEG00000024734	NUTM1 (ENSAMEG00000004098)	ENSAMEG00000004112	ENSAMEG00000020043	ENSAMEG00000029055	ENSAMEG00000028761	ENSAMEG00000024521	ENSAMEG00000025486	ENSAMEG00000023985	ENSAMEG00000000220 #16	DPYSL2 (ENSAMEG00000000223) #17	PNMA2 (ENSAMEG00000023900) #18	BNIP3L (ENSAMEG00000000287) #19	PPP2R2A (ENSAMEG00000000302) #20	EBF2 (ENSAMEG00000000326) #22	CDCA2 (ENSAMEG00000000346) #23	KCTD9 (ENSAMEG00000000365) #24	GNRH1 (ENSAMEG00000000386) #25	DOCK5 (ENSAMEG00000000393) #26	NEFL (ENSAMEG00000000584) #27	ENSAMEG00000000596 #28	ADAM7 (ENSAMEG00000001607) #29	ADAMDEC1 (ENSAMEG00000001578) #30	ADAM28 (ENSAMEG00000001508) #31	STC1 (ENSAMEG00000024356) #32	NKX2-6 (ENSAMEG00000002863) #33	NKX3-1 (ENSAMEG00000026096)	SLC25A37 (ENSAMEG00000002868) #35	ENTPD4 (ENSAMEG00000002873)	LOXL2 (ENSAMEG00000002911)
Mustelinae	ANCESTRAL SPECIES	104															ENSGT00950000182864.a.b.a #20	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #27	ENSGT00940000161685.A.a #28	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930	ENSGT00940000158607 #35	ENSGT01100000263540.B.d	ENSGT00940000155874
Ferret	MODERN SPECIES	256												ENSMPUG00000003166	AADAT (ENSMPUG00000003172)	ENSMPUG00000003181	PPP2R2A (ENSMPUG00000003186) #20	EBF2 (ENSMPUG00000003195) #22	ENSMPUG00000003203	CDCA2 (ENSMPUG00000003208) #23	KCTD9 (ENSMPUG00000003214) #24	GNRH1 (ENSMPUG00000003219) #25	DOCK5 (ENSMPUG00000003228) #26	NEFL (ENSMPUG00000003244) #27	ENSMPUG00000003249 #28	ADAM7 (ENSMPUG00000003252) #29	ENSMPUG00000018762	ADAMDEC1 (ENSMPUG00000003330) #30	ADAM28 (ENSMPUG00000003381) #31	STC1 (ENSMPUG00000003399) #32	NKX2-6 (ENSMPUG00000003409) #33	NKX3-1 (ENSMPUG00000003418)	SLC25A37 (ENSMPUG00000003422) #35
American mink	MODERN SPECIES	363															PPP2R2A (ENSNVIG00000019771) #20	EBF2 (ENSNVIG00000019723) #22	CDCA2 (ENSNVIG00000019695) #23	KCTD9 (ENSNVIG00000019678) #24	GNRH1 (ENSNVIG00000019664) #25	DOCK5 (ENSNVIG00000019592) #26	ENSNVIG00000019578 #27	NEFM (ENSNVIG00000019575)
Canidae	ANCESTRAL SPECIES	31	ENSGT00940000158598	ENSGT00390000004380.f	ENSGT00940000158238 #7	ENSGT00530000063668.B #8	ENSGT00510000049722 #9	ENSGT00940000158614 #10	ENSGT00940000158299 #12	ENSGT00940000157269.a.a #13	ENSGT00940000160868 #14	ENSGT01030000234597.a.b.a #15	ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT01030000234522.C.b.e.a.a.b #18	ENSGT00390000013415.a.b.q.a #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734.h #26	ENSGT00940000156208 #27	ENSGT00940000161685.A.a #28	ENSGT00940000154418.a.b	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930	ENSGT00940000158607 #35	ENSGT01100000263540.B.d
Canis_lupus	ANCESTRAL SPECIES	18	ENSGT00390000004380.f	ENSGT00940000158238 #7	ENSGT00530000063668.B #8	ENSGT00510000049722 #9	ENSGT00940000158614 #10	ENSGT00940000158299 #12	ENSGT00940000157269.a.a #13	ENSGT00940000160868 #14	ENSGT00980000202976	ENSGT01030000234597.a.b.a #15	ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT01030000234522.C.b.e.a.a.b #18	ENSGT00390000013415.a.b.q.a #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734.h #26	ENSGT00940000156208 #27	ENSGT00940000161685.A.a #28	ENSGT00940000154418.a.b	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930	ENSGT00940000158607 #35	ENSGT01100000263540.B.d
Dingo	MODERN SPECIES	304	SCARA3 (ENSCAFG00020012469) #7	CLU (ENSCAFG00020012476) #8	ENSCAFG00020012482 #9	EPHX2 (ENSCAFG00020012494) #10	CHRNA2 (ENSCAFG00020012510) #12	PTK2B (ENSCAFG00020012533) #13	TRIM35 (ENSCAFG00020012559) #14	ENSCAFG00020012574	STMN4 (ENSCAFG00020012576) #15	ADRA1A (ENSCAFG00020012587) #16	DPYSL2 (ENSCAFG00020012592) #17	ENSCAFG00020012600	PNMA2 (ENSCAFG00020012608) #18	ENSCAFG00020012611 #19	PPP2R2A (ENSCAFG00020012619) #20	EBF2 (ENSCAFG00020012629) #22	CDCA2 (ENSCAFG00020012668) #23	KCTD9 (ENSCAFG00020012683) #24	GNRH1 (ENSCAFG00020012686) #25	DOCK5 (ENSCAFG00020012698) #26	NEFM (ENSCAFG00020012742)	NEFL (ENSCAFG00020012757) #27	ADAM7 (ENSCAFG00020012781) #29	ADAM28 (ENSCAFG00020012819) #31	STC1 (ENSCAFG00020012841) #32	ENSCAFG00020012845 #33	NKX3-1 (ENSCAFG00020012847)	SLC25A37 (ENSCAFG00020012855) #35	ENSCAFG00020012856	LOXL2 (ENSCAFG00020012866)	R3HCC1 (ENSCAFG00020012870)
Dog	MODERN SPECIES	17	SCARA3 (ENSCAFG00845010317) #7	CLU (ENSCAFG00845010565) #8	ENSCAFG00845010841 #9	EPHX2 (ENSCAFG00845011024) #10	CHRNA2 (ENSCAFG00845011451) #12	PTK2B (ENSCAFG00845011700) #13	TRIM35 (ENSCAFG00845012423) #14	ENSCAFG00845012522	STMN4 (ENSCAFG00845012672) #15	ADRA1A (ENSCAFG00845012931) #16	DPYSL2 (ENSCAFG00845013099) #17	ENSCAFG00845013305	PNMA2 (ENSCAFG00845013366) #18	PPP2R2A (ENSCAFG00845013440) #19	PPP2R2A (ENSCAFG00845013645) #20	EBF2 (ENSCAFG00845013887) #22	ENSCAFG00845013986	ENSCAFG00845014017	CDCA2 (ENSCAFG00845014066) #23	KCTD9 (ENSCAFG00845014154) #24	GNRH1 (ENSCAFG00845014221) #25	DOCK5 (ENSCAFG00845014289) #26	NEFL (ENSCAFG00845014438) #27	NEFM (ENSCAFG00845014497) #28	ADAM7 (ENSCAFG00845014694) #29	ADAMDEC1 (ENSCAFG00845014873) #30	ADAM28 (ENSCAFG00845015078) #31	STC1 (ENSCAFG00845015608) #32	NKX2-6 (ENSCAFG00845015839) #33	NKX3-1 (ENSCAFG00845015954)	SLC25A37 (ENSCAFG00845016130) #35
Red fox	MODERN SPECIES	67	SCARA3 (ENSVVUG00000003490) #7	CLU (ENSVVUG00000003495) #8	ENSVVUG00000003499 #9	EPHX2 (ENSVVUG00000003509) #10	CHRNA2 (ENSVVUG00000003529) #12	PTK2B (ENSVVUG00000003546) #13	TRIM35 (ENSVVUG00000003575) #14	STMN4 (ENSVVUG00000003585) #15	ADRA1A (ENSVVUG00000003602) #16	ENSVVUG00000003623	DPYSL2 (ENSVVUG00000003636) #17	ENSVVUG00000003679	PNMA2 (ENSVVUG00000003687) #18	ENSVVUG00000003696 #19	PPP2R2A (ENSVVUG00000003745) #20	EBF2 (ENSVVUG00000003772) #22	ENSVVUG00000004033 #23	ENSVVUG00000004038	KCTD9 (ENSVVUG00000004063) #24	GNRH1 (ENSVVUG00000004172) #25	ENSVVUG00000004182 #26	ENSVVUG00000004272 #26	ENSVVUG00000004850	NEFL (ENSVVUG00000004852) #27	NEFM (ENSVVUG00000004862)	ADAM7 (ENSVVUG00000004873) #29	ADAMDEC1 (ENSVVUG00000004882) #30	ADAM28 (ENSVVUG00000004891) #31	STC1 (ENSVVUG00000004921) #32	NKX2-6 (ENSVVUG00000004929) #33	ENSVVUG00000004932
Felidae	ANCESTRAL SPECIES	4	ENSGT00940000156986	ENSGT00390000018326	ENSGT00550000074618.a.b	ENSGT00390000006260	ENSGT00950000183162.b	ENSGT00940000159168	ENSGT00940000157326.h	ENSGT00940000160287	ENSGT00390000012859	ENSGT00390000003878	ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT01030000234522.C.b.e.a.a.b #18	ENSGT00390000013415.a.b.q.a #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #27	ENSGT00940000161685.A.a #28	ENSGT00940000154418.a.b	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930	ENSGT00940000158607 #35	ENSGT01100000263540.B.d
Panthera	ANCESTRAL SPECIES	5	ENSGT00940000156986	ENSGT00390000018326	ENSGT00550000074618.a.b	ENSGT00390000006260	ENSGT00950000183162.b	ENSGT00940000159168	ENSGT00940000157326.h	ENSGT00940000160287	ENSGT00390000012859	ENSGT00390000003878	ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT01030000234522.C.b.e.a.a.b #18	ENSGT00390000013415.a.b.q.a #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #27	ENSGT00940000161685.A.a #28	ENSGT00940000154418.a.b	ENSGT00940000161406.b #29	ENSGT00940000161406.a #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930	ENSGT00940000158607 #35
Panthera_a	ANCESTRAL SPECIES	2	ENSGT00940000156986	ENSGT00390000018326.c	ENSGT00550000074618.a.b	ENSGT00390000006260	ENSGT00950000183162.b	ENSGT00940000159168	ENSGT00940000157326.h	ENSGT00940000160287	ENSGT00390000012859	ENSGT00390000003878	ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT01030000234522.C.b.e.a.a.b #18	ENSGT00390000013415.a.b.q.a #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #27	ENSGT00940000154418.a.b	ENSGT00940000161406.b #29	ENSGT00940000161685.A.a #28	ENSGT00940000161406.a #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930	ENSGT00940000158607 #35
lion	MODERN SPECIES	4	ENSPLOG00000001604	PPP2CB (ENSPLOG00000001655)	TEX15 (ENSPLOG00000001699)	PURG (ENSPLOG00000001734)	WRN (ENSPLOG00000001754)	NRG1 (ENSPLOG00000002181)	ENSPLOG00000002510	FUT10 (ENSPLOG00000002522)	MAK16 (ENSPLOG00000002547)	TTI2 (ENSPLOG00000002576)	ADRA1A (ENSPLOG00000002621) #16	DPYSL2 (ENSPLOG00000002681) #17	PNMA2 (ENSPLOG00000002750) #18	BNIP3L (ENSPLOG00000002778) #19	PPP2R2A (ENSPLOG00000002836) #20	EBF2 (ENSPLOG00000002904) #22	CDCA2 (ENSPLOG00000002958) #23	KCTD9 (ENSPLOG00000003006) #24	GNRH1 (ENSPLOG00000003031) #25	DOCK5 (ENSPLOG00000003063) #26	ENSPLOG00000003197 #28	NEFL (ENSPLOG00000003220) #27	ADAM7 (ENSPLOG00000003308) #29	ADAMDEC1 (ENSPLOG00000003417) #30	ADAM28 (ENSPLOG00000003535) #31	STC1 (ENSPLOG00000003716) #32	NKX2-6 (ENSPLOG00000003735) #33	NKX3-1 (ENSPLOG00000003755)	SLC25A37 (ENSPLOG00000003786) #35	ENTPD4 (ENSPLOG00000003831)	LOXL2 (ENSPLOG00000003867)
leopard	MODERN SPECIES	49	PURG (ENSPPRG00000011836)	WRN (ENSPPRG00000010928)	ENSPPRG00000009523	ENSPPRG00000009398	ENSPPRG00000009260	NRG1 (ENSPPRG00000008036)	FUT10 (ENSPPRG00000002861)	MAK16 (ENSPPRG00000002317)	TTI2 (ENSPPRG00000002077)	ENSPPRG00000001728	ADRA1A (ENSPPRG00000000941) #16	DPYSL2 (ENSPPRG00000000390) #17	PNMA2 (ENSPPRG00000017614) #18	ENSPPRG00000023377 #19	PPP2R2A (ENSPPRG00000023725) #20	EBF2 (ENSPPRG00000024264) #22	CDCA2 (ENSPPRG00000017681) #23	KCTD9 (ENSPPRG00000013953) #24	GNRH1 (ENSPPRG00000013600) #25	DOCK5 (ENSPPRG00000013437) #26	ENSPPRG00000011381 #27	NEFL (ENSPPRG00000010879) #27	NEFM (ENSPPRG00000009800)	ENSPPRG00000008890 #29	ENSPPRG00000007410 #29	ADAMDEC1 (ENSPPRG00000006694) #30	ADAM28 (ENSPPRG00000005754) #31	STC1 (ENSPPRG00000004675) #32	NKX2-6 (ENSPPRG00000004345) #33	NKX3-1 (ENSPPRG00000004152)	SLC25A37 (ENSPPRG00000003800) #35
Tiger	MODERN SPECIES	446	GTF2E2 (ENSPTIG00000015001)	GSR (ENSPTIG00000010109)	UBXN8 (ENSPTIG00000008126)	PPP2CB (ENSPTIG00000006186)	PURG (ENSPTIG00000000641)	WRN (ENSPTIG00000020609)	NRG1 (ENSPTIG00000015564)	FUT10 (ENSPTIG00000014430)	MAK16 (ENSPTIG00000014223)	TTI2 (ENSPTIG00000013872)	ADRA1A (ENSPTIG00000012913) #16	DPYSL2 (ENSPTIG00000009643) #17	PNMA2 (ENSPTIG00000004671) #18	BNIP3L (ENSPTIG00000007550) #19	PPP2R2A (ENSPTIG00000004184) #20	EBF2 (ENSPTIG00000021987) #22	CDCA2 (ENSPTIG00000020815) #23	KCTD9 (ENSPTIG00000020189) #24	GNRH1 (ENSPTIG00000019710) #25	DOCK5 (ENSPTIG00000015263) #26	NEFL (ENSPTIG00000013748) #27	ENSPTIG00000013410 #28	ENSPTIG00000010903 #29	ENSPTIG00000008882 #29	ADAMDEC1 (ENSPTIG00000007220) #30	ADAM28 (ENSPTIG00000020425) #31	STC1 (ENSPTIG00000020203) #32	NKX3-1 (ENSPTIG00000019365)	SLC25A37 (ENSPTIG00000018510) #35	ENTPD4 (ENSPTIG00000014881)	LOXL2 (ENSPTIG00000013484)
Cat	MODERN SPECIES	235	GSR (ENSFCAG00000001476)	UBXN8 (ENSFCAG00000026418)	PPP2CB (ENSFCAG00000025139)	TEX15 (ENSFCAG00000041903)	PURG (ENSFCAG00000014218)	WRN (ENSFCAG00000024759)	NRG1 (ENSFCAG00000024086)	FUT10 (ENSFCAG00000003845)	MAK16 (ENSFCAG00000033972)	TTI2 (ENSFCAG00000015300)	ADRA1A (ENSFCAG00000023739) #16	DPYSL2 (ENSFCAG00000005338) #17	PNMA2 (ENSFCAG00000032107) #18	BNIP3L (ENSFCAG00000030159) #19	PPP2R2A (ENSFCAG00000029721) #20	EBF2 (ENSFCAG00000003607) #22	ENSFCAG00000023720	CDCA2 (ENSFCAG00000011887) #23	KCTD9 (ENSFCAG00000011885) #24	GNRH1 (ENSFCAG00000029305) #25	DOCK5 (ENSFCAG00000011883) #26	NEFL (ENSFCAG00000013441) #27	NEFM (ENSFCAG00000029288)	ADAM7 (ENSFCAG00000013087) #29	ADAMDEC1 (ENSFCAG00000003531) #30	ADAM28 (ENSFCAG00000008957) #31	STC1 (ENSFCAG00000026611) #32	NKX2-6 (ENSFCAG00000038582) #33	NKX3-1 (ENSFCAG00000039688)	SLC25A37 (ENSFCAG00000005418) #35	ENTPD4 (ENSFCAG00000005417)
Laurasiatheria_c	ANCESTRAL SPECIES	8	ENSGT00940000158598	ENSGT00390000004380	ENSGT00940000158238 #7	ENSGT00530000063668.B #8	ENSGT00510000049722 #9	ENSGT00940000158614 #10	ENSGT00940000158299 #12	ENSGT00940000157269.a.a #13	ENSGT00940000160868 #14	ENSGT01030000234597.a.b.a #15	ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT01030000234522.C.b.e.a.a.b #18	ENSGT00390000013415.a.b #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00990000214190	ENSGT00940000156208 #27	ENSGT00940000161685.A.a #28	ENSGT00940000154418.a.b	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930	ENSGT00940000158607 #35
Equus	ANCESTRAL SPECIES	24	ENSGT00940000158598	ENSGT00390000004380	ENSGT00940000158238 #7	ENSGT00530000063668.B #8	ENSGT00510000049722 #9	ENSGT00940000158614 #10	ENSGT00940000158299 #12	ENSGT00940000157269.a.a #13	ENSGT00940000160868 #14	ENSGT01030000234597.a.b.a #15	ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT01030000234522.C.b.e.a.a.b #18	ENSGT00390000013415.a.b #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00990000214190	ENSGT00940000156208 #27	ENSGT00940000154418.a.b	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930	ENSGT00940000158607 #35	ENSGT01100000263540.B.d
Donkey	MODERN SPECIES	22	ESCO2 (ENSEASG00005016302)	CCDC25 (ENSEASG00005037176)	SCARA3 (ENSEASG00005016295) #7	CLU (ENSEASG00005016294) #8	ENSEASG00005016285 #9	EPHX2 (ENSEASG00005016280) #10	CHRNA2 (ENSEASG00005016279) #12	PTK2B (ENSEASG00005015727) #13	TRIM35 (ENSEASG00005015643) #14	STMN4 (ENSEASG00005015641) #15	ADRA1A (ENSEASG00005015639) #16	DPYSL2 (ENSEASG00005015636) #17	BNIP3L (ENSEASG00005015633) #19	ENSEASG00005015629 #20	PNMA2 (ENSEASG00005035920) #18	EBF2 (ENSEASG00005015624) #22	CDCA2 (ENSEASG00005015623) #23	KCTD9 (ENSEASG00005015621) #24	GNRH1 (ENSEASG00005015619) #25	DOCK5 (ENSEASG00005015240) #26	ENSEASG00005032794	NEFL (ENSEASG00005015035) #27	NEFM (ENSEASG00005015031)	ENSEASG00005018749 #29	ENSEASG00005025876 #29	ADAMDEC1 (ENSEASG00005018757) #30	ADAM28 (ENSEASG00005018766) #31	STC1 (ENSEASG00005025792) #32	NKX2-6 (ENSEASG00005018774) #33	NKX3-1 (ENSEASG00005018775)	SLC25A37 (ENSEASG00005026222) #35
Horse	MODERN SPECIES	11	ESCO2 (ENSECAG00000012899)	CCDC25 (ENSECAG00000011924)	SCARA3 (ENSECAG00000011350) #7	CLU (ENSECAG00000007010) #8	GULO (ENSECAG00000003068) #9	EPHX2 (ENSECAG00000023444) #10	CHRNA2 (ENSECAG00000022609) #12	PTK2B (ENSECAG00000018924) #13	TRIM35 (ENSECAG00000018548) #14	STMN4 (ENSECAG00000044039) #15	ADRA1A (ENSECAG00000015917) #16	DPYSL2 (ENSECAG00000008662) #17	PNMA2 (ENSECAG00000008517) #18	BNIP3L (ENSECAG00000005770) #19	PPP2R2A (ENSECAG00000019205) #20	EBF2 (ENSECAG00000014179) #22	ENSECAG00000051786	ENSECAG00000032941	ENSECAG00000048777	CDCA2 (ENSECAG00000013188) #23	KCTD9 (ENSECAG00000011535) #24	GNRH1 (ENSECAG00000010664) #25	DOCK5 (ENSECAG00000023607) #26	NEFL (ENSECAG00000022890) #27	NEFM (ENSECAG00000022370)	ADAM7 (ENSECAG00000020537) #29	ADAMDEC1 (ENSECAG00000019922) #30	ADAM28 (ENSECAG00000014577) #31	ENSECAG00000053236	STC1 (ENSECAG00000013731) #32	NKX2-6 (ENSECAG00000028673) #33
Chiroptera	ANCESTRAL SPECIES	64											ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT01030000234522.C.b.e.a.a.b #18	ENSGT00390000013415.a.b #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #27	ENSGT00940000161685.A.a #28	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930	ENSGT00940000158607 #35	ENSGT01100000263540.B.d	ENSGT00940000155874
Megabat	MODERN SPECIES	3400														BNIP3L (ENSPVAG00000008294) #19	PPP2R2A (ENSPVAG00000024136) #20	EBF2 (ENSPVAG00000024254) #22
Microchiroptera	ANCESTRAL SPECIES	57											ENSGT00940000159105 #16	ENSGT01030000234527.A.a.b.a.a #17	ENSGT01030000234522.C.b.e.a.a.b #18	ENSGT00390000013415.a.b #19	ENSGT00950000182864.a.b.a #20	ENSGT00950000182859.A.a.a.b #22	ENSGT00940000154352.A #23	ENSGT00940000154314 #24	ENSGT00390000008225 #25	ENSGT00940000157734 #26	ENSGT00940000156208 #27	ENSGT00940000161685.A.a #28	ENSGT00940000161406 #29	ENSGT00900000141143 #30	ENSGT00940000156716 #31	ENSGT00390000005989.b #32	ENSGT00940000162737 #33	ENSGT00940000160930	ENSGT00940000158607 #35	ENSGT01100000263540.B.d	ENSGT00940000155874
Microbat	MODERN SPECIES	1085										ADRA1A (ENSMLUG00000027812) #16	ENSMLUG00000023958	ENSMLUG00000025762	DPYSL2 (ENSMLUG00000000271) #17	BNIP3L (ENSMLUG00000014949) #19	PPP2R2A (ENSMLUG00000030355) #20	EBF2 (ENSMLUG00000011509) #22	CDCA2 (ENSMLUG00000006321) #23	KCTD9 (ENSMLUG00000006310) #24	GNRH1 (ENSMLUG00000006306) #25	DOCK5 (ENSMLUG00000006278) #26	ENSMLUG00000029940 #28	ADAM7 (ENSMLUG00000009580) #29	ADAMDEC1 (ENSMLUG00000009552) #30	ADAM28 (ENSMLUG00000009526) #31	ENSMLUG00000027935	ENSMLUG00000023520	STC1 (ENSMLUG00000010663) #32	NKX3-1 (ENSMLUG00000006118)
Greater horseshoe bat	MODERN SPECIES	9	FBXL12 (ENSRFEG00010005897)	ENSRFEG00010005931	ENSRFEG00010005962	ZNF699 (ENSRFEG00010005993)	ENSRFEG00010006027	ENSRFEG00010006057	ENSRFEG00010006089	ENSRFEG00010006149	OR7D4 (ENSRFEG00010006172)	OR7D2 (ENSRFEG00010006200)	ADRA1A (ENSRFEG00010006218) #16	DPYSL2 (ENSRFEG00010006268) #17	PNMA2 (ENSRFEG00010006352) #18	BNIP3L (ENSRFEG00010006372) #19	PPP2R2A (ENSRFEG00010006444) #20	EBF2 (ENSRFEG00010006593) #22	CDCA2 (ENSRFEG00010006703) #23	KCTD9 (ENSRFEG00010006936) #24	GNRH1 (ENSRFEG00010006984) #25	DOCK5 (ENSRFEG00010007027) #26	NEFL (ENSRFEG00010007163) #27	ENSRFEG00010007201 #28	ADAM7 (ENSRFEG00010007316) #29	ADAMDEC1 (ENSRFEG00010007930) #30	ADAM28 (ENSRFEG00010007990) #31	STC1 (ENSRFEG00010008368) #32	ENSRFEG00010008447	ENSRFEG00010008464	NKX2-6 (ENSRFEG00010008490) #33	NKX3-1 (ENSRFEG00010008525)	SLC25A37 (ENSRFEG00010008583) #35
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00950000182859.A.a.a.b #22
Common shrew	MODERN SPECIES	2280																EBF2 (ENSSARG00000012320) #22