Euteleostomi	ANCESTRAL SPECIES	5	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00720000108846.b	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.a.b ##21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000165654	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00940000179241	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794
Sarcopterygii	ANCESTRAL SPECIES	20	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00720000108846.b	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000165654	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Tetrapoda	ANCESTRAL SPECIES	15	ENSGT00940000156376 #8	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00720000108846.b	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00730000111187.a.b ##21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000165654	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00940000179241	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910
Amniota	ANCESTRAL SPECIES	12	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00720000108846.b	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000165654	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00940000174613	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000179241	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359
Mammalia	ANCESTRAL SPECIES	2	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00960000188973	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000165654	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00940000174613	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910
Theria	ANCESTRAL SPECIES	12	ENSGT00390000017528	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000165654	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00940000174613	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910
Eutheria	ANCESTRAL SPECIES		ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000165654	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00940000174613	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910
Boreoeutheria	ANCESTRAL SPECIES		ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00940000174613	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794
Euarchontoglires	ANCESTRAL SPECIES		ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Primates	ANCESTRAL SPECIES	7	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e	ENSGT00390000004585
Strepsirrhini	DUPLICATION
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c.m #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560.a #22	ENSGT00940000156560.b ##22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Lemuriformes	ANCESTRAL SPECIES																	ENSGT00940000156560.a #22
Lemuriformes_a	ANCESTRAL SPECIES	12	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c.m #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560.a #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00940000179241	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Coquerels sifaka	MODERN SPECIES	136	ENSPCOG00000025541 #7	ATF3 (ENSPCOG00000014411) #8	GARIN4 (ENSPCOG00000023922) #9	BATF3 (ENSPCOG00000020309) #10	NSL1 (ENSPCOG00000023360) #11	ENSPCOG00000013500 #12	SPATA45 (ENSPCOG00000011584) #13	FLVCR1 (ENSPCOG00000023146) #14	VASH2 (ENSPCOG00000018323) #15	ANGEL2 (ENSPCOG00000024621) #16	RPS6KC1 (ENSPCOG00000023248) #17	PROX1 (ENSPCOG00000018563) #18	SMYD2 (ENSPCOG00000028523) #19	PTPN14 (ENSPCOG00000006004) #20	CENPF (ENSPCOG00000013597) #21	KCNK2 (ENSPCOG00000001877) #22	KCTD3 (ENSPCOG00000008460) #23
Bushbaby	MODERN SPECIES	344								RPS6KC1 (ENSOGAG00000013193) #17	ENSOGAG00000024451	ENSOGAG00000000449	PROX1 (ENSOGAG00000017025) #18	SMYD2 (ENSOGAG00000017028) #19	ENSOGAG00000033159	PTPN14 (ENSOGAG00000017030) #20	CENPF (ENSOGAG00000001123) #21	ENSOGAG00000033696 #22
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c.m #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560.a #22	ENSGT00940000156560.b ##22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e	ENSGT00390000004585
Lemuriformes	ANCESTRAL SPECIES	26	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c.m #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560.b ##22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e	ENSGT00390000004585
Lemuriformes_a	ANCESTRAL SPECIES																	ENSGT00940000156560.b ##22
Greater bamboo lemur	MODERN SPECIES	542	NENF (ENSPSMG00000024628) #7	ATF3 (ENSPSMG00000024632) #8	ENSPSMG00000024639 #9	BATF3 (ENSPSMG00000024644) #10	NSL1 (ENSPSMG00000024661) #11	TATDN3 (ENSPSMG00000024676)	SPATA45 (ENSPSMG00000024684) #13	FLVCR1 (ENSPSMG00000024687) #14	VASH2 (ENSPSMG00000024701) #15	ANGEL2 (ENSPSMG00000024726) #16	RPS6KC1 (ENSPSMG00000024765) #17	PROX1 (ENSPSMG00000024779) #18	SMYD2 (ENSPSMG00000024785) #19	PTPN14 (ENSPSMG00000024802) #20	CENPF (ENSPSMG00000024824) #21	KCNK2 (ENSPSMG00000000095) ##22
Mouse lemur	MODERN SPECIES	19													SMYD2 (ENSMICG00000011606) #19	PTPN14 (ENSMICG00000011628) #20	CENPF (ENSMICG00000011643) #21	KCNK2 (ENSMICG00000004889) ##22	KCTD3 (ENSMICG00000033484) #23	USH2A (ENSMICG00000005002)	ESRRG (ENSMICG00000005051)	GPATCH2 (ENSMICG00000037090)	SPATA17 (ENSMICG00000012115)	RRP15 (ENSMICG00000001591)	TGFB2 (ENSMICG00000001597)	LYPLAL1 (ENSMICG00000041495)	SLC30A10 (ENSMICG00000037352)	EPRS1 (ENSMICG00000038220)	BPNT1 (ENSMICG00000017745)	IARS2 (ENSMICG00000017746)	RAB3GAP2 (ENSMICG00000017747)	MARK1 (ENSMICG00000005893)	C1orf115 (ENSMICG00000038121)
Bushbaby	MODERN SPECIES	283																ENSOGAG00000008190 ##22	KCTD3 (ENSOGAG00000014778) #23	USH2A (ENSOGAG00000014786)	ESRRG (ENSOGAG00000014802)	GPATCH2 (ENSOGAG00000004485)	ENSOGAG00000024461	RRP15 (ENSOGAG00000010180)	TGFB2 (ENSOGAG00000010182)	ENSOGAG00000028259
Haplorrhini	ANCESTRAL SPECIES	7	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e	ENSGT00390000004585
Tarsier	MODERN SPECIES	5714																KCNK2 (ENSTSYG00000000993) #22	ENSTSYG00000031156
Simiiformes	ANCESTRAL SPECIES	8	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00390000017839.o.b.b.a.b	ENSGT00950000182810.A.a.a.mb.b.a
Catarrhini	ANCESTRAL SPECIES	10	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00390000017839.o.b.b.a.b	ENSGT00950000182810.A.a.a.mb.b.a
Hominoidea	ANCESTRAL SPECIES	7	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00390000017839.o.b.b.a.b	ENSGT00940000157560.e
Hominidae	ANCESTRAL SPECIES	6	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00390000017839.o.b.b.a.b	ENSGT00940000157560.e
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	6	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT01010000222851.c	ENSGT00920000149095.a.h	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794
Homo/Pan group	ANCESTRAL SPECIES	7	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00920000149095.a.h	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Pan	ANCESTRAL SPECIES		ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00910000147483	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000154900.f
Chimpanzee	MODERN SPECIES		ATF3 (ENSPTRG00000001962) #8	GARIN4 (ENSPTRG00000001964) #9	BATF3 (ENSPTRG00000001965) #10	NSL1 (ENSPTRG00000001966) #11	TATDN3 (ENSPTRG00000030168)	ENSPTRG00000001967 #13	FLVCR1 (ENSPTRG00000001968) #14	VASH2 (ENSPTRG00000001969) #15	ANGEL2 (ENSPTRG00000001970) #16	RPS6KC1 (ENSPTRG00000001972) #17	PROX1 (ENSPTRG00000001974) #18	SMYD2 (ENSPTRG00000001975) #19	PTPN14 (ENSPTRG00000001976) #20	CENPF (ENSPTRG00000001977) #21	ENSPTRG00000042737	KCNK2 (ENSPTRG00000001978) #22	ENSPTRG00000046254	KCTD3 (ENSPTRG00000001979) #23	USH2A (ENSPTRG00000001984)	ESRRG (ENSPTRG00000023622)	GPATCH2 (ENSPTRG00000001986)	SPATA17 (ENSPTRG00000001988)	RRP15 (ENSPTRG00000039779)	TGFB2 (ENSPTRG00000001992)	LYPLAL1 (ENSPTRG00000001993)	SLC30A10 (ENSPTRG00000001994)	EPRS1 (ENSPTRG00000001995)	BPNT1 (ENSPTRG00000001996)	IARS2 (ENSPTRG00000001997)	RAB3GAP2 (ENSPTRG00000001999)	ENSPTRG00000052357
Bonobo	MODERN SPECIES		ENSPPAG00000040317	ATF3 (ENSPPAG00000029919) #8	GARIN4 (ENSPPAG00000013681) #9	BATF3 (ENSPPAG00000028294) #10	NSL1 (ENSPPAG00000002209) #11	TATDN3 (ENSPPAG00000036534)	SPATA45 (ENSPPAG00000034742) #13	FLVCR1 (ENSPPAG00000037631) #14	VASH2 (ENSPPAG00000033209) #15	ANGEL2 (ENSPPAG00000031266) #16	RPS6KC1 (ENSPPAG00000004085) #17	PROX1 (ENSPPAG00000035353) #18	SMYD2 (ENSPPAG00000031724) #19	PTPN14 (ENSPPAG00000030914) #20	CENPF (ENSPPAG00000030416) #21	KCNK2 (ENSPPAG00000030707) #22	ENSPPAG00000034142	KCTD3 (ENSPPAG00000041980) #23	USH2A (ENSPPAG00000030873)	ESRRG (ENSPPAG00000035120)	GPATCH2 (ENSPPAG00000038887)	SPATA17 (ENSPPAG00000031018)	ENSPPAG00000018811	RRP15 (ENSPPAG00000042109)	TGFB2 (ENSPPAG00000030603)	LYPLAL1 (ENSPPAG00000038656)	SLC30A10 (ENSPPAG00000041238)	EPRS1 (ENSPPAG00000036757)	BPNT1 (ENSPPAG00000030575)	IARS2 (ENSPPAG00000029870)	RAB3GAP2 (ENSPPAG00000041652)
Human	MODERN SPECIES		NENF (ENSG00000117691) #7	ATF3 (ENSG00000162772) #8	GARIN4 (ENSG00000162771) #9	BATF3 (ENSG00000123685) #10	NSL1 (ENSG00000117697) #11	TATDN3 (ENSG00000203705)	SPATA45 (ENSG00000185523) #13	FLVCR1 (ENSG00000162769) #14	VASH2 (ENSG00000143494) #15	ANGEL2 (ENSG00000174606) #16	RPS6KC1 (ENSG00000136643) #17	PROX1 (ENSG00000117707) #18	SMYD2 (ENSG00000143499) #19	PTPN14 (ENSG00000152104) #20	CENPF (ENSG00000117724) #21	KCNK2 (ENSG00000082482) #22	KCTD3 (ENSG00000136636) #23	USH2A (ENSG00000042781)	ESRRG (ENSG00000196482)	GPATCH2 (ENSG00000092978)	SPATA17 (ENSG00000162814)	RRP15 (ENSG00000067533)	TGFB2 (ENSG00000092969)	LYPLAL1 (ENSG00000143353)	ZC3H11B (ENSG00000215817)	SLC30A10 (ENSG00000196660)	EPRS1 (ENSG00000136628)	BPNT1 (ENSG00000162813)	IARS2 (ENSG00000067704)	RAB3GAP2 (ENSG00000118873)	MARK1 (ENSG00000116141)
Gorilla	MODERN SPECIES		ATF3 (ENSGGOG00000014206) #8	GARIN4 (ENSGGOG00000002765) #9	BATF3 (ENSGGOG00000042619) #10	NSL1 (ENSGGOG00000003473) #11	TATDN3 (ENSGGOG00000027473)	SPATA45 (ENSGGOG00000037749) #13	FLVCR1 (ENSGGOG00000001738) #14	VASH2 (ENSGGOG00000004494) #15	ANGEL2 (ENSGGOG00000009560) #16	RPS6KC1 (ENSGGOG00000002154) #17	PROX1 (ENSGGOG00000015130) #18	SMYD2 (ENSGGOG00000005698) #19	PTPN14 (ENSGGOG00000000957) #20	ENSGGOG00000036819	CENPF (ENSGGOG00000002373) #21	KCNK2 (ENSGGOG00000022229) #22	ENSGGOG00000040219	USH2A (ENSGGOG00000009561)	ESRRG (ENSGGOG00000010263)	GPATCH2 (ENSGGOG00000009440)	SPATA17 (ENSGGOG00000009448)	KCTD3 (ENSGGOG00000001811) #23	RRP15 (ENSGGOG00000016603)	TGFB2 (ENSGGOG00000004593)	LYPLAL1 (ENSGGOG00000001773)	ENSGGOG00000008911	SLC30A10 (ENSGGOG00000009511)	EPRS1 (ENSGGOG00000012404)	BPNT1 (ENSGGOG00000022921)	IARS2 (ENSGGOG00000007340)	RAB3GAP2 (ENSGGOG00000013163)
Orangutan	MODERN SPECIES		NENF (ENSPPYG00000000236) #7	ATF3 (ENSPPYG00000000235) #8	GARIN4 (ENSPPYG00000040057) #9	BATF3 (ENSPPYG00000000234) #10	NSL1 (ENSPPYG00000000233) #11	TATDN3 (ENSPPYG00000000232)	SPATA45 (ENSPPYG00000000231) #13	FLVCR1 (ENSPPYG00000000229) #14	VASH2 (ENSPPYG00000000228) #15	ANGEL2 (ENSPPYG00000000227) #16	RPS6KC1 (ENSPPYG00000000226) #17	PROX1 (ENSPPYG00000000224) #18	SMYD2 (ENSPPYG00000000223) #19	PTPN14 (ENSPPYG00000000222) #20	CENPF (ENSPPYG00000000221) #21	KCNK2 (ENSPPYG00000000220) #22	KCTD3 (ENSPPYG00000000219) #23	USH2A (ENSPPYG00000000218)	ESRRG (ENSPPYG00000000217)	GPATCH2 (ENSPPYG00000000216)	SPATA17 (ENSPPYG00000000215)	RRP15 (ENSPPYG00000000214)	TGFB2 (ENSPPYG00000000213)	LYPLAL1 (ENSPPYG00000000212)	SLC30A10 (ENSPPYG00000000211)	EPRS1 (ENSPPYG00000000210)	BPNT1 (ENSPPYG00000000209)	ENSPPYG00000037208	IARS2 (ENSPPYG00000000208)	RAB3GAP2 (ENSPPYG00000000207)	MARK1 (ENSPPYG00000000206)
Gibbon	MODERN SPECIES	20	PCSK9 (ENSNLEG00000014590)	ENSNLEG00000014589	TMEM61 (ENSNLEG00000014586)	DHCR24 (ENSNLEG00000014578)	LEXM (ENSNLEG00000014568)	TTC22 (ENSNLEG00000014562)	FLVCR1 (ENSNLEG00000014539) #14	ENSNLEG00000014519 #15	ANGEL2 (ENSNLEG00000014500) #16	RPS6KC1 (ENSNLEG00000014441) #17	PROX1 (ENSNLEG00000014435) #18	SMYD2 (ENSNLEG00000014428) #19	PTPN14 (ENSNLEG00000014407) #20	CENPF (ENSNLEG00000014381) #21	ENSNLEG00000033042	KCNK2 (ENSNLEG00000014361) #22	KCTD3 (ENSNLEG00000014312) #23	USH2A (ENSNLEG00000014249)	ESRRG (ENSNLEG00000014216)	GPATCH2 (ENSNLEG00000014201)	ENSNLEG00000028800	SPATA17 (ENSNLEG00000014182)	RRP15 (ENSNLEG00000031373)	TGFB2 (ENSNLEG00000014141)	LYPLAL1 (ENSNLEG00000032025)	SLC30A10 (ENSNLEG00000014114)	EPRS1 (ENSNLEG00000013988)	BPNT1 (ENSNLEG00000013965)	ENSNLEG00000031718	IARS2 (ENSNLEG00000013853)	RAB3GAP2 (ENSNLEG00000013829)
Cercopithecidae	ANCESTRAL SPECIES	20	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374.f #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e	ENSGT00390000004585
Cercopithecinae	ANCESTRAL SPECIES	18	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374.f #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e	ENSGT00390000004585
Vervet Monkey	MODERN SPECIES	17	NENF (ENSCSAG00000015395) #7	ATF3 (ENSCSAG00000015405) #8	GARIN4 (ENSCSAG00000000263) #9	BATF3 (ENSCSAG00000015412) #10	NSL1 (ENSCSAG00000015419) #11	TATDN3 (ENSCSAG00000015424)	ENSCSAG00000015430	FLVCR1 (ENSCSAG00000015440) #14	VASH2 (ENSCSAG00000015494) #15	ANGEL2 (ENSCSAG00000015513) #16	RPS6KC1 (ENSCSAG00000015524) #17	PROX1 (ENSCSAG00000015530) #18	SMYD2 (ENSCSAG00000015537) #19	PTPN14 (ENSCSAG00000015544) #20	CENPF (ENSCSAG00000015553) #21	KCNK2 (ENSCSAG00000015559) #22	ENSCSAG00000000264	ENSCSAG00000015567	KCTD3 (ENSCSAG00000015574) #23	USH2A (ENSCSAG00000015644)	ESRRG (ENSCSAG00000015679)	ENSCSAG00000015701	ENSCSAG00000015704	SPATA17 (ENSCSAG00000015709)	RRP15 (ENSCSAG00000015713)	TGFB2 (ENSCSAG00000015715)	ENSCSAG00000015738	LYPLAL1 (ENSCSAG00000015750)	SLC30A10 (ENSCSAG00000015760)	EPRS1 (ENSCSAG00000015776)	BPNT1 (ENSCSAG00000015787)
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374.f #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000154879.lb.a.a	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Cercopithecinae_b	ANCESTRAL SPECIES	3	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374.f #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00950000183080.a.b.a.b.b.ab	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000154879.lb.a.a	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794
Cercopithecinae_d	ANCESTRAL SPECIES	67	ENSGT00390000017528	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000161120 #10	ENSGT00390000001374.f #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00950000183080.a.b.a.b.b.ab	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00910000146866
Sooty mangabey	MODERN SPECIES	513	PACC1 (ENSCATG00000012633)	NENF (ENSCATG00000044551) #7	ATF3 (ENSCATG00000037360) #8	BATF3 (ENSCATG00000037195) #10	NSL1 (ENSCATG00000045286) #11	TATDN3 (ENSCATG00000045213)	SPATA45 (ENSCATG00000015825) #13	FLVCR1 (ENSCATG00000040192) #14	VASH2 (ENSCATG00000042912) #15	ANGEL2 (ENSCATG00000031702) #16	RPS6KC1 (ENSCATG00000013042) #17	PROX1 (ENSCATG00000038887) #18	SMYD2 (ENSCATG00000043581) #19	PTPN14 (ENSCATG00000038177) #20	CENPF (ENSCATG00000040315) #21	KCNK2 (ENSCATG00000015955) #22	KCTD3 (ENSCATG00000040895) #23	ENSCATG00000034336	USH2A (ENSCATG00000029777)	ESRRG (ENSCATG00000044398)	GPATCH2 (ENSCATG00000038238)	SPATA17 (ENSCATG00000025059)	RRP15 (ENSCATG00000021235)	TGFB2 (ENSCATG00000030306)	LYPLAL1 (ENSCATG00000043110)	SLC30A10 (ENSCATG00000033354)	EPRS1 (ENSCATG00000045050)	BPNT1 (ENSCATG00000015453)	IARS2 (ENSCATG00000043392)	RAB3GAP2 (ENSCATG00000012118)	ENSCATG00000040603
Drill	MODERN SPECIES	1196				NSL1 (ENSMLEG00000028636) #11	ENSMLEG00000035745	TATDN3 (ENSMLEG00000039404)	SPATA45 (ENSMLEG00000040911) #13	FLVCR1 (ENSMLEG00000033007) #14	VASH2 (ENSMLEG00000029869) #15	ANGEL2 (ENSMLEG00000031699) #16	RPS6KC1 (ENSMLEG00000029917) #17	PROX1 (ENSMLEG00000036413) #18	SMYD2 (ENSMLEG00000034225) #19	PTPN14 (ENSMLEG00000033075) #20	CENPF (ENSMLEG00000037072) #21	KCNK2 (ENSMLEG00000042490) #22
Olive baboon	MODERN SPECIES		ENSPANG00000044876	ENSPANG00000037410	NSL1 (ENSPANG00000021442) #11	TATDN3 (ENSPANG00000026097)	SPATA45 (ENSPANG00000003460) #13	FLVCR1 (ENSPANG00000015223) #14	ENSPANG00000040581	VASH2 (ENSPANG00000008486) #15	ANGEL2 (ENSPANG00000024020) #16	RPS6KC1 (ENSPANG00000017815) #17	PROX1 (ENSPANG00000017714) #18	SMYD2 (ENSPANG00000013753) #19	PTPN14 (ENSPANG00000003305) #20	CENPF (ENSPANG00000002386) #21	ENSPANG00000007591	KCNK2 (ENSPANG00000010636) #22	ENSPANG00000039006	KCTD3 (ENSPANG00000016718) #23	ENSPANG00000020677	USH2A (ENSPANG00000010480)	ESRRG (ENSPANG00000014193)	ENSPANG00000040866	GPATCH2 (ENSPANG00000020943)	SPATA17 (ENSPANG00000012134)	ENSPANG00000045253	RRP15 (ENSPANG00000016573)	TGFB2 (ENSPANG00000017620)	LYPLAL1 (ENSPANG00000014635)	ENSPANG00000042545	SLC30A10 (ENSPANG00000019211)	EPRS1 (ENSPANG00000004476)
Macaca	ANCESTRAL SPECIES		ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374.f #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000154879.lb.a.a	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Pig-tailed macaque	MODERN SPECIES	204	ATF3 (ENSMNEG00000044528) #8	BATF3 (ENSMNEG00000012965) #10	ENSMNEG00000021942	NSL1 (ENSMNEG00000034616) #11	TATDN3 (ENSMNEG00000033507)	FLVCR1 (ENSMNEG00000029472) #14	VASH2 (ENSMNEG00000020215) #15	ANGEL2 (ENSMNEG00000027131) #16	RPS6KC1 (ENSMNEG00000029897) #17	PROX1 (ENSMNEG00000031336) #18	SMYD2 (ENSMNEG00000037770) #19	PTPN14 (ENSMNEG00000029573) #20	CENPF (ENSMNEG00000040232) #21	ENSMNEG00000001691	ENSMNEG00000000754	KCNK2 (ENSMNEG00000035782) #22	KCTD3 (ENSMNEG00000029482) #23	USH2A (ENSMNEG00000030217)	ESRRG (ENSMNEG00000042999)	GPATCH2 (ENSMNEG00000034969)	SPATA17 (ENSMNEG00000039678)	RRP15 (ENSMNEG00000044170)	TGFB2 (ENSMNEG00000043377)	LYPLAL1 (ENSMNEG00000028805)	ENSMNEG00000012078	SLC30A10 (ENSMNEG00000032165)	EPRS1 (ENSMNEG00000023887)	BPNT1 (ENSMNEG00000038467)	IARS2 (ENSMNEG00000038908)	RAB3GAP2 (ENSMNEG00000030474)	ENSMNEG00000035849
Macaca_a	ANCESTRAL SPECIES		ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374.f #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000154879.lb.a.a	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Rhesus	MODERN SPECIES		GARIN4 (ENSMMUG00000052576) #9	BATF3 (ENSMMUG00000015056) #10	NSL1 (ENSMMUG00000019287) #11	TATDN3 (ENSMMUG00000031430)	ENSMMUG00000051591	SPATA45 (ENSMMUG00000059169) #13	FLVCR1 (ENSMMUG00000011732) #14	VASH2 (ENSMMUG00000011733) #15	ANGEL2 (ENSMMUG00000011735) #16	RPS6KC1 (ENSMMUG00000005210) #17	PROX1 (ENSMMUG00000011914) #18	SMYD2 (ENSMMUG00000015631) #19	PTPN14 (ENSMMUG00000015632) #20	CENPF (ENSMMUG00000015634) #21	ENSMMUG00000031435	KCNK2 (ENSMMUG00000016931) #22	KCTD3 (ENSMMUG00000022639) #23	USH2A (ENSMMUG00000022640)	ENSMMUG00000056375	ESRRG (ENSMMUG00000014167)	GPATCH2 (ENSMMUG00000014946)	SPATA17 (ENSMMUG00000007213)	RRP15 (ENSMMUG00000004070)	TGFB2 (ENSMMUG00000004071)	ENSMMUG00000052461	ENSMMUG00000057626	LYPLAL1 (ENSMMUG00000007806)	SLC30A10 (ENSMMUG00000061301)	EPRS1 (ENSMMUG00000008722)	BPNT1 (ENSMMUG00000017396)	IARS2 (ENSMMUG00000007783)
Crab-eating macaque	MODERN SPECIES		NENF (ENSMFAG00000061910) #7	ENSMFAG00000058853	ENSMFAG00000033392 #8	GARIN4 (ENSMFAG00000001230) #9	ENSMFAG00000031859 #10	NSL1 (ENSMFAG00000042309) #11	TATDN3 (ENSMFAG00000041006)	FLVCR1 (ENSMFAG00000032026) #14	VASH2 (ENSMFAG00000041909) #15	ANGEL2 (ENSMFAG00000039813) #16	RPS6KC1 (ENSMFAG00000034322) #17	PROX1 (ENSMFAG00000042228) #18	SMYD2 (ENSMFAG00000022994) #19	PTPN14 (ENSMFAG00000001580) #20	CENPF (ENSMFAG00000038702) #21	KCNK2 (ENSMFAG00000037275) #22	KCTD3 (ENSMFAG00000042976) #23	USH2A (ENSMFAG00000043973)	ENSMFAG00000016818	ESRRG (ENSMFAG00000004706)	ENSMFAG00000055622	GPATCH2 (ENSMFAG00000000617)	SPATA17 (ENSMFAG00000030832)	RRP15 (ENSMFAG00000046095)	TGFB2 (ENSMFAG00000054210)	LYPLAL1 (ENSMFAG00000003062)	ENSMFAG00000030239	SLC30A10 (ENSMFAG00000051013)	EPRS1 (ENSMFAG00000041902)	BPNT1 (ENSMFAG00000003970)	IARS2 (ENSMFAG00000000345)
Rhinopithecus	ANCESTRAL SPECIES	189																ENSGT00940000156560 #22	ENSGT00910000147483	ENSGT00940000170416	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794
Golden snub-nosed monkey	MODERN SPECIES	805																KCNK2 (ENSRROG00000037498) #22	ENSRROG00000044823	ENSRROG00000044929	KCTD3 (ENSRROG00000012326) #23	ENSRROG00000034880
Black snub-nosed monkey	MODERN SPECIES	305																KCNK2 (ENSRBIG00000041890) #22	ENSRBIG00000036717	KCTD3 (ENSRBIG00000042097) #23	USH2A (ENSRBIG00000044398)	ESRRG (ENSRBIG00000028583)	GPATCH2 (ENSRBIG00000028371)	SPATA17 (ENSRBIG00000037273)	RRP15 (ENSRBIG00000033496)	TGFB2 (ENSRBIG00000013890)	LYPLAL1 (ENSRBIG00000026721)	SLC30A10 (ENSRBIG00000028231)	EPRS1 (ENSRBIG00000034767)	BPNT1 (ENSRBIG00000043345)	IARS2 (ENSRBIG00000002958)	ENSRBIG00000033068	RAB3GAP2 (ENSRBIG00000027351)
Platyrrhini	ANCESTRAL SPECIES	24	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960.e.a	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00390000017839.o.b.b.a.b	ENSGT00950000182810.A.a.a.mb.b.a
Cebidae	ANCESTRAL SPECIES	23	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960.e.a	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e	ENSGT00390000004585
Marmoset	MODERN SPECIES	10	TATDN3 (ENSCJAG00000015712)	SPATA45 (ENSCJAG00000015706) #13	FLVCR1 (ENSCJAG00000015690) #14	VASH2 (ENSCJAG00000042796) #15	ANGEL2 (ENSCJAG00000015618) #16	ENSCJAG00000080375	RPS6KC1 (ENSCJAG00000015526) #17	ENSCJAG00000075052	PROX1 (ENSCJAG00000015514) #18	ENSCJAG00000085826	ENSCJAG00000083995	ENSCJAG00000081067	SMYD2 (ENSCJAG00000015441) #19	PTPN14 (ENSCJAG00000015389) #20	ENSCJAG00000074620	KCNK2 (ENSCJAG00000015327) #22	KCTD3 (ENSCJAG00000046030) #23	ENSCJAG00000074427	ENSCJAG00000071156	USH2A (ENSCJAG00000015184)	ESRRG (ENSCJAG00000015141)	ENSCJAG00000038362	GPATCH2 (ENSCJAG00000047537)	ENSCJAG00000078398	ENSCJAG00000073545	ENSCJAG00000074072	ENSCJAG00000023052	RRP15 (ENSCJAG00000012916)	TGFB2 (ENSCJAG00000012931)	ENSCJAG00000040858	ENSCJAG00000072272
Cebidae_a	ANCESTRAL SPECIES	11	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391.a #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960.e.a	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00950000182810.A.a.a.mb.b.a	ENSGT00940000157560.e
Capuchin	MODERN SPECIES	411													ENSCCAG00000016071 #20	CENPF (ENSCCAG00000026111) #21	ENSCCAG00000022687	KCNK2 (ENSCCAG00000023209) #22	KCTD3 (ENSCCAG00000021071) #23	USH2A (ENSCCAG00000022774)
Bolivian squirrel monkey	MODERN SPECIES	79	ATF3 (ENSSBOG00000030879) #8	BATF3 (ENSSBOG00000028690) #10	NSL1 (ENSSBOG00000018022) #11	SPATA45 (ENSSBOG00000031495) #13	TATDN3 (ENSSBOG00000026391)	FLVCR1 (ENSSBOG00000034630) #14	VASH2 (ENSSBOG00000003716) #15	ANGEL2 (ENSSBOG00000023625) #16	ENSSBOG00000024418	RPS6KC1 (ENSSBOG00000018202) #17	PROX1 (ENSSBOG00000032750) #18	SMYD2 (ENSSBOG00000029207) #19	PTPN14 (ENSSBOG00000007166) #20	CENPF (ENSSBOG00000024619) #21	ENSSBOG00000027013	KCNK2 (ENSSBOG00000024888) #22	KCTD3 (ENSSBOG00000027335) #23	USH2A (ENSSBOG00000022136)	ESRRG (ENSSBOG00000029289)	GPATCH2 (ENSSBOG00000028891)	SPATA17 (ENSSBOG00000035908)	ENSSBOG00000020746	ENSSBOG00000011565	TGFB2 (ENSSBOG00000031148)	LYPLAL1 (ENSSBOG00000022915)	SLC30A10 (ENSSBOG00000019263)	EPRS1 (ENSSBOG00000029926)	BPNT1 (ENSSBOG00000032496)	IARS2 (ENSSBOG00000020069)	RAB3GAP2 (ENSSBOG00000029227)	ENSSBOG00000026338
Mas night monkey	MODERN SPECIES	958	NENF (ENSANAG00000028745) #7	ATF3 (ENSANAG00000037037) #8	BATF3 (ENSANAG00000036250) #10	NSL1 (ENSANAG00000034470) #11	TATDN3 (ENSANAG00000034556)	ENSANAG00000036696	FLVCR1 (ENSANAG00000029598) #14	VASH2 (ENSANAG00000032216) #15	ANGEL2 (ENSANAG00000029357) #16	ENSANAG00000017378	RPS6KC1 (ENSANAG00000036580) #17	PROX1 (ENSANAG00000028544) #18	SMYD2 (ENSANAG00000028402) #19	PTPN14 (ENSANAG00000024204) #20	CENPF (ENSANAG00000023683) #21	KCNK2 (ENSANAG00000027145) #22	KCTD3 (ENSANAG00000028292) #23	USH2A (ENSANAG00000024118)	ESRRG (ENSANAG00000021556)	GPATCH2 (ENSANAG00000032851)	SPATA17 (ENSANAG00000017809)	ENSANAG00000019880	TGFB2 (ENSANAG00000032505)	ENSANAG00000024112	LYPLAL1 (ENSANAG00000025763)	SLC30A10 (ENSANAG00000021852)	EPRS1 (ENSANAG00000022208)	BPNT1 (ENSANAG00000022540)	IARS2 (ENSANAG00000013146)	RAB3GAP2 (ENSANAG00000037148)	ENSANAG00000021939
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Tree shrew	MODERN SPECIES	5456																KCNK2 (ENSTBEG00000001144) #22
Glires	ANCESTRAL SPECIES		ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Lagomorpha	ANCESTRAL SPECIES	15	ENSGT01030000234620.a.b.b.b	ENSGT00390000017528	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00940000179241	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Rabbit	MODERN SPECIES	7	PACC1 (ENSOCUG00000009061)	ATF3 (ENSOCUG00000017424) #8	GARIN4 (ENSOCUG00000017415) #9	NSL1 (ENSOCUG00000004789) #11	ENSOCUG00000004792	SPATA45 (ENSOCUG00000004799) #13	FLVCR1 (ENSOCUG00000004804) #14	VASH2 (ENSOCUG00000008579) #15	ANGEL2 (ENSOCUG00000008585) #16	ENSOCUG00000035779	ENSOCUG00000013968	RPS6KC1 (ENSOCUG00000013953) #17	PROX1 (ENSOCUG00000008274) #18	SMYD2 (ENSOCUG00000015379) #19	PTPN14 (ENSOCUG00000015400) #20	KCNK2 (ENSOCUG00000008629) #22	KCTD3 (ENSOCUG00000001943) #23	ENSOCUG00000014710	ESRRG (ENSOCUG00000000984)	ENSOCUG00000033147	GPATCH2 (ENSOCUG00000014512)	SPATA17 (ENSOCUG00000014523)	RRP15 (ENSOCUG00000017863)	TGFB2 (ENSOCUG00000005279)	LYPLAL1 (ENSOCUG00000000388)	ENSOCUG00000007393	ENSOCUG00000038407	ENSOCUG00000022661	SLC30A10 (ENSOCUG00000003407)	ENSOCUG00000038973	EPRS1 (ENSOCUG00000012039)
Pika	MODERN SPECIES	4700																KCNK2 (ENSOPRG00000010018) #22
Rodentia	ANCESTRAL SPECIES		ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Rodentia_B	ANCESTRAL SPECIES		ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Kangaroo rat	MODERN SPECIES	345	Batf3 (ENSDORG00000025907) #10	Nsl1 (ENSDORG00000028451) #11	Tatdn3 (ENSDORG00000014148)	Spata45 (ENSDORG00000014481) #13	Flvcr1 (ENSDORG00000002942) #14	Vash2 (ENSDORG00000000751) #15	Angel2 (ENSDORG00000000752) #16	Rps6kc1 (ENSDORG00000000754) #17	Prox1 (ENSDORG00000007622) #18	ENSDORG00000026445	Smyd2 (ENSDORG00000016521) #19	ENSDORG00000016522 #20	ENSDORG00000029041 #20	Cenpf (ENSDORG00000025961) #21	ENSDORG00000024360	Kcnk2 (ENSDORG00000005481) #22	Kctd3 (ENSDORG00000014846) #23	Ush2a (ENSDORG00000014848)	Esrrg (ENSDORG00000005752)	Gpatch2 (ENSDORG00000030155)	Spata17 (ENSDORG00000013451)	Rrp15 (ENSDORG00000004058)	Tgfb2 (ENSDORG00000004061)	Lyplal1 (ENSDORG00000013506)	Slc30a10 (ENSDORG00000005519)	Eprs (ENSDORG00000004335)	Bpnt1 (ENSDORG00000009974)	Iars2 (ENSDORG00000009975)	Rab3gap2 (ENSDORG00000009979)	Mark1 (ENSDORG00000007847)	C130074G19Rik (ENSDORG00000028858)
Myomorpha	ANCESTRAL SPECIES	48	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Muroidea	ANCESTRAL SPECIES	9	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Muroidea_A	ANCESTRAL SPECIES	12	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Cricetidae	ANCESTRAL SPECIES	13	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Cricetidae_B	ANCESTRAL SPECIES	8	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Northern American deer mouse	MODERN SPECIES	2	Nsl1 (ENSPEMG00000001946) #11	Tatdn3 (ENSPEMG00000016778)	Spata45 (ENSPEMG00000015887) #13	Flvcr1 (ENSPEMG00000014742) #14	Vash2 (ENSPEMG00000009643) #15	Angel2 (ENSPEMG00000009630) #16	Rps6kc1 (ENSPEMG00000008234) #17	ENSPEMG00000006434	ENSPEMG00000025216 ##18	Prox1 (ENSPEMG00000005585) #18	ENSPEMG00000029028	Smyd2 (ENSPEMG00000016202) #19	Ptpn14 (ENSPEMG00000012598) #20	Cenpf (ENSPEMG00000008292) #21	ENSPEMG00000030532	Kcnk2 (ENSPEMG00000003700) #22	Kctd3 (ENSPEMG00000010370) #23	Ush2a (ENSPEMG00000011465)	Esrrg (ENSPEMG00000024753)	Gpatch2 (ENSPEMG00000018364)	Spata17 (ENSPEMG00000012857)	D1Pas1 (ENSPEMG00000010847)	Rrp15 (ENSPEMG00000009408)	Tgfb2 (ENSPEMG00000014434)	Lyplal1 (ENSPEMG00000012126)	Slc30a10 (ENSPEMG00000011831)	Eprs (ENSPEMG00000017287)	Bpnt1 (ENSPEMG00000009846)	Iars2 (ENSPEMG00000000136)	Rab3gap2 (ENSPEMG00000009957)	Mark1 (ENSPEMG00000023503)
Prairie vole	MODERN SPECIES	14	Atf3 (ENSMOCG00000019538) #8	Garin4 (ENSMOCG00000017084) #9	Batf3 (ENSMOCG00000020540) #10	Nsl1 (ENSMOCG00000020317) #11	Tatdn3 (ENSMOCG00000019831)	Spata45 (ENSMOCG00000017094) #13	Flvcr1 (ENSMOCG00000013229) #14	Vash2 (ENSMOCG00000002399) #15	Angel2 (ENSMOCG00000022027) #16	Rps6kc1 (ENSMOCG00000021401) #17	ENSMOCG00000014377	Prox1 (ENSMOCG00000003310) #18	Smyd2 (ENSMOCG00000000847) #19	Ptpn14 (ENSMOCG00000010851) #20	Cenpf (ENSMOCG00000012377) #21	Kcnk2 (ENSMOCG00000018400) #22	Kctd3 (ENSMOCG00000021391) #23	Esrrg (ENSMOCG00000013956)	ENSMOCG00000008935	Gpatch2 (ENSMOCG00000020821)	Spata17 (ENSMOCG00000006657)	D1Pas1 (ENSMOCG00000002596)	Rrp15 (ENSMOCG00000019339)	Tgfb2 (ENSMOCG00000022415)	Lyplal1 (ENSMOCG00000019697)	Slc30a10 (ENSMOCG00000018487)	ENSMOCG00000016971	Eprs (ENSMOCG00000012748)	Bpnt1 (ENSMOCG00000011708)	Iars2 (ENSMOCG00000017822)	Rab3gap2 (ENSMOCG00000022853)
Cricetinae	ANCESTRAL SPECIES	4	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00940000154443.b.a	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794
Chinese hamster chok1gshd	MODERN SPECIES	2	Atf3 (ENSCGRG00001013063) #8	Garin4 (ENSCGRG00001010554) #9	Batf3 (ENSCGRG00001017448) #10	Nsl1 (ENSCGRG00001017667) #11	Tatdn3 (ENSCGRG00001019330)	Spata45 (ENSCGRG00001020534) #13	Flvcr1 (ENSCGRG00001021256) #14	Vash2 (ENSCGRG00001022829) #15	Angel2 (ENSCGRG00001024663) #16	Rps6kc1 (ENSCGRG00001018952) #17	ENSCGRG00001012264	Prox1 (ENSCGRG00001000943) #18	Smyd2 (ENSCGRG00001013013) #19	Ptpn14 (ENSCGRG00001017884) #20	Cenpf (ENSCGRG00001016593) #21	Kcnk2 (ENSCGRG00001013573) #22	Kctd3 (ENSCGRG00001016634) #23	Ush2a (ENSCGRG00001010994)	Esrrg (ENSCGRG00001012185)	ENSCGRG00001012111	Gpatch2 (ENSCGRG00001024577)	Spata17 (ENSCGRG00001019652)	D1Pas1 (ENSCGRG00001002373)	Rrp15 (ENSCGRG00001023815)	Tgfb2 (ENSCGRG00001021969)	ENSCGRG00001012226	Lyplal1 (ENSCGRG00001016783)	ENSCGRG00001010835	Slc30a10 (ENSCGRG00001004526)	EPRS (ENSCGRG00001009885)	Bpnt1 (ENSCGRG00001023609)
Golden Hamster	MODERN SPECIES	744															Cenpf (ENSMAUG00000017524) #21	Kcnk2 (ENSMAUG00000004359) #22	Kctd3 (ENSMAUG00000016425) #23	ENSMAUG00000002879	ENSMAUG00000009220	Gpatch2 (ENSMAUG00000004851)	Spata17 (ENSMAUG00000008429)	D1Pas1 (ENSMAUG00000000329)	Rrp15 (ENSMAUG00000020012)	Tgfb2 (ENSMAUG00000010097)	Lyplal1 (ENSMAUG00000017031)	ENSMAUG00000020698	Slc30a10 (ENSMAUG00000007513)	ENSMAUG00000001832	Eprs (ENSMAUG00000012512)	Bpnt1 (ENSMAUG00000020057)	Iars2 (ENSMAUG00000012822)
Murinae	ANCESTRAL SPECIES	11	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Mus	ANCESTRAL SPECIES	5	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Mus_B	ANCESTRAL SPECIES	7	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Mouse	MODERN SPECIES		Nenf (ENSMUSG00000037499) #7	Atf3 (ENSMUSG00000026628) #8	Garin4 (ENSMUSG00000091017) #9	Batf3 (ENSMUSG00000026630) #10	Nsl1 (ENSMUSG00000062510) #11	Tatdn3 (ENSMUSG00000026632)	Spata45 (ENSMUSG00000057072) #13	Flvcr1 (ENSMUSG00000066595) #14	Vash2 (ENSMUSG00000037568) #15	Angel2 (ENSMUSG00000026634) #16	Rps6kc1 (ENSMUSG00000089872) #17	Prox1 (ENSMUSG00000010175) #18	Smyd2 (ENSMUSG00000026603) #19	Ptpn14 (ENSMUSG00000026604) #20	Cenpf (ENSMUSG00000026605) #21	Kcnk2 (ENSMUSG00000037624) #22	Kctd3 (ENSMUSG00000026608) #23	Ush2a (ENSMUSG00000026609)	Esrrg (ENSMUSG00000026610)	Gpatch2 (ENSMUSG00000039210)	Spata17 (ENSMUSG00000026611)	D1Pas1 (ENSMUSG00000039224)	Rrp15 (ENSMUSG00000001305)	Tgfb2 (ENSMUSG00000039239)	Lyplal1 (ENSMUSG00000039246)	Slc30a10 (ENSMUSG00000026614)	Eprs (ENSMUSG00000026615)	Bpnt1 (ENSMUSG00000026617)	Iars2 (ENSMUSG00000026618)	Rab3gap2 (ENSMUSG00000039318)	Mark1 (ENSMUSG00000026620)
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00940000154443.b.a	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794
spretus	MODERN SPECIES		Atf3 (MGP_SPRETEiJ_G0015848) #8	Garin4 (MGP_SPRETEiJ_G0015847) #9	Batf3 (MGP_SPRETEiJ_G0015846) #10	Nsl1 (MGP_SPRETEiJ_G0015845) #11	Tatdn3 (MGP_SPRETEiJ_G0015844)	Spata45 (MGP_SPRETEiJ_G0015843) #13	Flvcr1 (MGP_SPRETEiJ_G0015842) #14	Vash2 (MGP_SPRETEiJ_G0015841) #15	Angel2 (MGP_SPRETEiJ_G0015840) #16	Rps6kc1 (MGP_SPRETEiJ_G0015839) #17	Prox1 (MGP_SPRETEiJ_G0015838) #18	Ighv2-7 (MGP_SPRETEiJ_G0000034)	Smyd2 (MGP_SPRETEiJ_G0015837) #19	Ptpn14 (MGP_SPRETEiJ_G0015836) #20	Cenpf (MGP_SPRETEiJ_G0015835) #21	Kcnk2 (MGP_SPRETEiJ_G0015834) #22	Kctd3 (MGP_SPRETEiJ_G0015833) #23	MGP_SPRETEiJ_G0015832	Esrrg (MGP_SPRETEiJ_G0015831)	Gpatch2 (MGP_SPRETEiJ_G0015830)	Spata17 (MGP_SPRETEiJ_G0015829)	D1Pas1 (MGP_SPRETEiJ_G0015828)	Rrp15 (MGP_SPRETEiJ_G0015827)	Tgfb2 (MGP_SPRETEiJ_G0015826)	Lyplal1 (MGP_SPRETEiJ_G0015825)	Slc30a10 (MGP_SPRETEiJ_G0015824)	Eprs (MGP_SPRETEiJ_G0015823)	Bpnt1 (MGP_SPRETEiJ_G0015822)	Iars2 (MGP_SPRETEiJ_G0015821)	Rab3gap2 (MGP_SPRETEiJ_G0015820)	Mark1 (MGP_SPRETEiJ_G0015819)
Steppe mouse	MODERN SPECIES	3418	ENSMSIG00000029314	ENSMSIG00000029315	Atf3 (ENSMSIG00000029326) #8	Garin4 (ENSMSIG00000029331) #9	ENSMSIG00000029332 #11	ENSMSIG00000029353	Spata45 (ENSMSIG00000029382) #13	Flvcr1 (ENSMSIG00000029386) #14	Vash2 (ENSMSIG00000029392) #15	Angel2 (ENSMSIG00000029399) #16	Rps6kc1 (ENSMSIG00000029410) #17	Prox1 (ENSMSIG00000029428) #18	Smyd2 (ENSMSIG00000029433) #19	Ptpn14 (ENSMSIG00000029436) #20	Cenpf (ENSMSIG00000029453) #21	Kcnk2 (ENSMSIG00000029469) #22	Kctd3 (ENSMSIG00000029533) #23	Ush2a (ENSMSIG00000029542)	Esrrg (ENSMSIG00000029593)	ENSMSIG00000029619	Gpatch2 (ENSMSIG00000029622)	Spata17 (ENSMSIG00000029638)
Ryukyu mouse	MODERN SPECIES		Nenf (MGP_CAROLIEiJ_G0015049) #7	Atf3 (MGP_CAROLIEiJ_G0015048) #8	Garin4 (MGP_CAROLIEiJ_G0015047) #9	Batf3 (MGP_CAROLIEiJ_G0015046) #10	Nsl1 (MGP_CAROLIEiJ_G0015045) #11	Tatdn3 (MGP_CAROLIEiJ_G0015044)	Spata45 (MGP_CAROLIEiJ_G0015043) #13	Flvcr1 (MGP_CAROLIEiJ_G0015042) #14	Vash2 (MGP_CAROLIEiJ_G0015041) #15	Angel2 (MGP_CAROLIEiJ_G0015040) #16	Rps6kc1 (MGP_CAROLIEiJ_G0015039) #17	Prox1 (MGP_CAROLIEiJ_G0015038) #18	Smyd2 (MGP_CAROLIEiJ_G0015037) #19	Ptpn14 (MGP_CAROLIEiJ_G0015036) #20	Cenpf (MGP_CAROLIEiJ_G0015035) #21	Kcnk2 (MGP_CAROLIEiJ_G0015034) #22	Kctd3 (MGP_CAROLIEiJ_G0015033) #23	MGP_CAROLIEiJ_G0015032	Esrrg (MGP_CAROLIEiJ_G0015031)	Gpatch2 (MGP_CAROLIEiJ_G0015030)	Spata17 (MGP_CAROLIEiJ_G0015029)	D1Pas1 (MGP_CAROLIEiJ_G0015028)	Rrp15 (MGP_CAROLIEiJ_G0015027)	Tgfb2 (MGP_CAROLIEiJ_G0015026)	Lyplal1 (MGP_CAROLIEiJ_G0015025)	Slc30a10 (MGP_CAROLIEiJ_G0015024)	Eprs (MGP_CAROLIEiJ_G0015023)	Bpnt1 (MGP_CAROLIEiJ_G0015022)	Iars2 (MGP_CAROLIEiJ_G0015021)	Rab3gap2 (MGP_CAROLIEiJ_G0015020)	Mark1 (MGP_CAROLIEiJ_G0015019)
Shrew mouse	MODERN SPECIES	18	Nenf (MGP_PahariEiJ_G0028281) #7	Atf3 (MGP_PahariEiJ_G0028280) #8	Garin4 (MGP_PahariEiJ_G0028279) #9	Batf3 (MGP_PahariEiJ_G0028278) #10	Nsl1 (MGP_PahariEiJ_G0028277) #11	MGP_PahariEiJ_G0028276	Spata45 (MGP_PahariEiJ_G0028275) #13	Flvcr1 (MGP_PahariEiJ_G0028274) #14	Vash2 (MGP_PahariEiJ_G0028273) #15	Angel2 (MGP_PahariEiJ_G0028272) #16	Rps6kc1 (MGP_PahariEiJ_G0028271) #17	Prox1 (MGP_PahariEiJ_G0028270) #18	MGP_PahariEiJ_G0028269 #19	MGP_PahariEiJ_G0028268 #20	Cenpf (MGP_PahariEiJ_G0028267) #21	Kcnk2 (MGP_PahariEiJ_G0028266) #22	Kctd3 (MGP_PahariEiJ_G0028265) #23	Ush2a (MGP_PahariEiJ_G0028264)	Esrrg (MGP_PahariEiJ_G0028263)	Gpatch2 (MGP_PahariEiJ_G0028262)	Spata17 (MGP_PahariEiJ_G0028261)	D1Pas1 (MGP_PahariEiJ_G0028260)	Rrp15 (MGP_PahariEiJ_G0028259)	Tgfb2 (MGP_PahariEiJ_G0028258)	Lyplal1 (MGP_PahariEiJ_G0028257)	Slc30a10 (MGP_PahariEiJ_G0028256)	Eprs (MGP_PahariEiJ_G0028255)	Bpnt1 (MGP_PahariEiJ_G0028254)	Iars2 (MGP_PahariEiJ_G0028253)	Rab3gap2 (MGP_PahariEiJ_G0028252)	Mark1 (MGP_PahariEiJ_G0028251)
Rat	MODERN SPECIES	4	Garin4 (ENSRNOG00000029371) #9	Batf3 (ENSRNOG00000003716) #10	Nsl1 (ENSRNOG00000042286) #11	Tatdn3 (ENSRNOG00000046460)	SPATA45 (ENSRNOG00000048659) #13	Flvcr1 (ENSRNOG00000049633) #14	Vash2 (ENSRNOG00000003832) #15	Angel2 (ENSRNOG00000003795) #16	LOC678708 (ENSRNOG00000071166)	Rps6kc1 (ENSRNOG00000003767) #17	Prox1 (ENSRNOG00000003694) #18	LOC498308 (ENSRNOG00000032812)	Smyd2 (ENSRNOG00000003583) #19	Ptpn14 (ENSRNOG00000003407) #20	Cenpf (ENSRNOG00000003388) #21	Kcnk2 (ENSRNOG00000002653) #22	LOC100361993 (ENSRNOG00000022144)	Kctd3 (ENSRNOG00000002627) #23	Ush2a (ENSRNOG00000003738)	Esrrg (ENSRNOG00000002593)	Gpatch2 (ENSRNOG00000002512)	Spata17 (ENSRNOG00000002504)	Ddx3y (ENSRNOG00000002501)	Rrp15 (ENSRNOG00000002450)	Tgfb2 (ENSRNOG00000002418)	Lyplal1 (ENSRNOG00000023130)	Slc30a10 (ENSRNOG00000002397)	Eprs1 (ENSRNOG00000002393)	Bpnt1 (ENSRNOG00000002378)	Iars2 (ENSRNOG00000002368)	Rab3gap2 (ENSRNOG00000002353)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1872	Pacc1 (ENSNGAG00000001036)	Nenf (ENSNGAG00000015999) #7	Atf3 (ENSNGAG00000017384) #8	Batf3 (ENSNGAG00000012341) #10	Nsl1 (ENSNGAG00000021030) #11	Tatdn3 (ENSNGAG00000015819)	Spata45 (ENSNGAG00000001409) #13	Flvcr1 (ENSNGAG00000009986) #14	Vash2 (ENSNGAG00000000617) #15	Angel2 (ENSNGAG00000009708) #16	Rps6kc1 (ENSNGAG00000007216) #17	Prox1 (ENSNGAG00000003426) #18	Smyd2 (ENSNGAG00000017594) #19	Ptpn14 (ENSNGAG00000000903) #20	Cenpf (ENSNGAG00000017286) #21	Kcnk2 (ENSNGAG00000015617) #22
Lesser Egyptian jerboa	MODERN SPECIES	221																Kcnk2 (ENSJJAG00000014395) #22	Kctd3 (ENSJJAG00000012952) #23	Esrrg (ENSJJAG00000012656)	ENSJJAG00000012242
Rodentia_A	ANCESTRAL SPECIES		ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e	ENSGT00390000004585
Sciuridae	ANCESTRAL SPECIES		ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00940000154268.e.a	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Marmotini	ANCESTRAL SPECIES	21	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00900000143015.b	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00940000154268.e.a	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Marmotini_b	ANCESTRAL SPECIES	160											ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00900000143015.b	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e	ENSGT00390000004585
Arctic ground squirrel	MODERN SPECIES	54													ENSUPAG00010008295 #20	CENPF (ENSUPAG00010009384) #21	ENSUPAG00010009433	KCNK2 (ENSUPAG00010009442) #22	KCTD3 (ENSUPAG00010009493) #23	USH2A (ENSUPAG00010009520)	ESRRG (ENSUPAG00010009597)	GPATCH2 (ENSUPAG00010009619)	SPATA17 (ENSUPAG00010009658)	RRP15 (ENSUPAG00010009681)	TGFB2 (ENSUPAG00010009688)	LYPLAL1 (ENSUPAG00010009729)	SLC30A10 (ENSUPAG00010009741)	EPRS1 (ENSUPAG00010009749)	BPNT1 (ENSUPAG00010009777)	IARS2 (ENSUPAG00010009798)	RAB3GAP2 (ENSUPAG00010009831)	MARK1 (ENSUPAG00010009891)	C1orf115 (ENSUPAG00010009923)
Squirrel	MODERN SPECIES	228												PROX1 (ENSSTOG00000026238) #18	SMYD2 (ENSSTOG00000008142) #19	PTPN14 (ENSSTOG00000024270) #20	CENPF (ENSSTOG00000034538) #21	KCNK2 (ENSSTOG00000010156) #22	KCTD3 (ENSSTOG00000005730) #23	USH2A (ENSSTOG00000008983)	ESRRG (ENSSTOG00000009493)	GPATCH2 (ENSSTOG00000024959)	ENSSTOG00000001331	RRP15 (ENSSTOG00000001244)	TGFB2 (ENSSTOG00000001250)
Alpin marmot	MODERN SPECIES	12	ENSMMMG00000000435 #9	BATF3 (ENSMMMG00000000419) #10	NSL1 (ENSMMMG00000000394) #11	TATDN3 (ENSMMMG00000000340)	ENSMMMG00000000314 #13	FLVCR1 (ENSMMMG00000000275) #14	VASH2 (ENSMMMG00000000245) #15	ANGEL2 (ENSMMMG00000000181) #16	ENSMMMG00000000164	RPS6KC1 (ENSMMMG00000000125) #17	PROX1 (ENSMMMG00000024214) #18	ENSMMMG00000024213 #19	PTPN14 (ENSMMMG00000024212) #20	CENPF (ENSMMMG00000024211) #21	ENSMMMG00000024210	KCNK2 (ENSMMMG00000024209) #22	KCTD3 (ENSMMMG00000024208) #23	USH2A (ENSMMMG00000024206)	ESRRG (ENSMMMG00000024205)	ENSMMMG00000024203	GPATCH2 (ENSMMMG00000024202)	SPATA17 (ENSMMMG00000024201)	RRP15 (ENSMMMG00000024199)	TGFB2 (ENSMMMG00000024197)	LYPLAL1 (ENSMMMG00000024196)	SLC30A10 (ENSMMMG00000024195)	EPRS1 (ENSMMMG00000024193)	BPNT1 (ENSMMMG00000024192)	ENSMMMG00000024191	IARS2 (ENSMMMG00000024190)	RAB3GAP2 (ENSMMMG00000024188)
Eurasian red squirrel	MODERN SPECIES	3	BATF3 (ENSSVLG00005016663) #10	NSL1 (ENSSVLG00005016609) #11	ENSSVLG00005016573	TATDN3 (ENSSVLG00005016168)	SPATA45 (ENSSVLG00005016084) #13	ENSSVLG00005016057	FLVCR1 (ENSSVLG00005015972) #14	VASH2 (ENSSVLG00005015835) #15	ANGEL2 (ENSSVLG00005015787) #16	RPS6KC1 (ENSSVLG00005015251) #17	PROX1 (ENSSVLG00005015139) #18	SMYD2 (ENSSVLG00005014781) #19	PTPN14 (ENSSVLG00005014690) #20	CENPF (ENSSVLG00005014494) #21	ENSSVLG00005014446	KCNK2 (ENSSVLG00005014267) #22	KCTD3 (ENSSVLG00005014023) #23	ENSSVLG00005021878	USH2A (ENSSVLG00005020592)	ESRRG (ENSSVLG00005020291)	ENSSVLG00005020247	GPATCH2 (ENSSVLG00005020165)	SPATA17 (ENSSVLG00005020029)	ENSSVLG00005019966	RRP15 (ENSSVLG00005019888)	TGFB2 (ENSSVLG00005019711)	LYPLAL1 (ENSSVLG00005019579)	ENSSVLG00005019505	SLC30A10 (ENSSVLG00005019457)	EPRS1 (ENSSVLG00005019363)	BPNT1 (ENSSVLG00005019226)
Hystricomorpha	ANCESTRAL SPECIES	49	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374.d #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e	ENSGT00940000159665
Hystricomorpha_a	ANCESTRAL SPECIES	13	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374.d #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e	ENSGT00940000159665
Guinea pig	MODERN SPECIES	13	ENSCPOG00000033847	ATF3 (ENSCPOG00000034947) #8	BATF3 (ENSCPOG00000032323) #10	NSL1 (ENSCPOG00000002451) #11	TATDN3 (ENSCPOG00000002454)	SPATA45 (ENSCPOG00000002457) #13	FLVCR1 (ENSCPOG00000011300) #14	ENSCPOG00000023888	VASH2 (ENSCPOG00000003871) #15	ANGEL2 (ENSCPOG00000003875) #16	RPS6KC1 (ENSCPOG00000009490) #17	PROX1 (ENSCPOG00000011987) #18	SMYD2 (ENSCPOG00000024400) #19	PTPN14 (ENSCPOG00000013729) #20	CENPF (ENSCPOG00000014374) #21	KCNK2 (ENSCPOG00000014507) #22	KCTD3 (ENSCPOG00000007778) #23	USH2A (ENSCPOG00000007786)	ESRRG (ENSCPOG00000036099)	GPATCH2 (ENSCPOG00000003966)	SPATA17 (ENSCPOG00000003975)	RRP15 (ENSCPOG00000007644)	TGFB2 (ENSCPOG00000007647)	LYPLAL1 (ENSCPOG00000010837)	SLC30A10 (ENSCPOG00000003584)	EPRS1 (ENSCPOG00000003586)	BPNT1 (ENSCPOG00000037184)	IARS2 (ENSCPOG00000012942)	RAB3GAP2 (ENSCPOG00000008416)	MARK1 (ENSCPOG00000002730)	MTARC2 (ENSCPOG00000027303)
Hystricomorpha_b	ANCESTRAL SPECIES	4	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374.d #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e	ENSGT00940000159665
Degu	MODERN SPECIES	58	ATF3 (ENSODEG00000013598) #8	GARIN4 (ENSODEG00000013574) #9	ENSODEG00000013720 #10	NSL1 (ENSODEG00000014696) #11	TATDN3 (ENSODEG00000013799)	SPATA45 (ENSODEG00000014271) #13	FLVCR1 (ENSODEG00000013456) #14	VASH2 (ENSODEG00000014165) #15	ANGEL2 (ENSODEG00000014913) #16	ENSODEG00000013498	RPS6KC1 (ENSODEG00000014689) #17	PROX1 (ENSODEG00000014117) #18	SMYD2 (ENSODEG00000014303) #19	PTPN14 (ENSODEG00000015282) #20	CENPF (ENSODEG00000013904) #21	KCNK2 (ENSODEG00000015231) #22	KCTD3 (ENSODEG00000014449) #23	USH2A (ENSODEG00000014824)	ESRRG (ENSODEG00000013965)	GPATCH2 (ENSODEG00000014927)	SPATA17 (ENSODEG00000016248)	RRP15 (ENSODEG00000013879)	TGFB2 (ENSODEG00000015102)	ENSODEG00000013760	ENSODEG00000015201	LYPLAL1 (ENSODEG00000014681)	SLC30A10 (ENSODEG00000014204)	ENSODEG00000014600	EPRS1 (ENSODEG00000014961)	BPNT1 (ENSODEG00000015018)	IARS2 (ENSODEG00000014882)
Long-tailed chinchilla	MODERN SPECIES	113	PPP2R5A (ENSCLAG00000012816)	PACC1 (ENSCLAG00000009570)	ENSCLAG00000007912	ATF3 (ENSCLAG00000013767) #8	NSL1 (ENSCLAG00000015217) #11	TATDN3 (ENSCLAG00000008909)	SPATA45 (ENSCLAG00000008856) #13	FLVCR1 (ENSCLAG00000012241) #14	VASH2 (ENSCLAG00000008864) #15	ANGEL2 (ENSCLAG00000007133) #16	RPS6KC1 (ENSCLAG00000008718) #17	PROX1 (ENSCLAG00000009881) #18	SMYD2 (ENSCLAG00000010831) #19	PTPN14 (ENSCLAG00000007231) #20	CENPF (ENSCLAG00000010635) #21	KCNK2 (ENSCLAG00000015253) #22	KCTD3 (ENSCLAG00000008084) #23	USH2A (ENSCLAG00000009662)	ESRRG (ENSCLAG00000006694)	GPATCH2 (ENSCLAG00000009274)	SPATA17 (ENSCLAG00000006629)	RRP15 (ENSCLAG00000008564)	TGFB2 (ENSCLAG00000007436)
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	16	INTS7 (ENSHGLG00000005372)	DTL (ENSHGLG00000006063)	ENSHGLG00000003379	PACC1 (ENSHGLG00000004632)	NENF (ENSHGLG00000005390) #7	ENSHGLG00000006406 #8	ENSHGLG00000007863 #15	ANGEL2 (ENSHGLG00000009577) #16	ENSHGLG00000011298 #17	PROX1 (ENSHGLG00000004005) #18	SMYD2 (ENSHGLG00000005014) #19	PTPN14 (ENSHGLG00000006819) #20	CENPF (ENSHGLG00000012286) #21	ENSHGLG00000043491	ENSHGLG00000050259	KCNK2 (ENSHGLG00000014892) #22	KCTD3 (ENSHGLG00000003630) #23	ESRRG (ENSHGLG00000009345)	GPATCH2 (ENSHGLG00000019513)	SPATA17 (ENSHGLG00000037088)	RRP15 (ENSHGLG00000002183)	TGFB2 (ENSHGLG00000002933)	LYPLAL1 (ENSHGLG00000035753)	ENSHGLG00000046215	EPRS1 (ENSHGLG00000001974)	BPNT1 (ENSHGLG00000002666)	IARS2 (ENSHGLG00000002201)	RAB3GAP2 (ENSHGLG00000002870)	MARK1 (ENSHGLG00000013879)	MTARC2 (ENSHGLG00000018981)	MTARC1 (ENSHGLG00000019512)
Naked mole-rat female	MODERN SPECIES	31	ENSHGLG00000000206	ENSHGLG00000032973	CD99L2 (ENSHGLG00000000568)	MTMR1 (ENSHGLG00000000382)	ENSHGLG00000044631	MTM1 (ENSHGLG00000000507)	ENSHGLG00000000314	MAMLD1 (ENSHGLG00000048250)	ENSHGLG00000036941	ENSHGLG00000049272	ENSHGLG00000049037	ENSHGLG00000047966	ENSHGLG00000037462	ENSHGLG00000049790	ENSHGLG00000044671	ENSHGLG00000033617 #22	ENSHGLG00000045983	ENSHGLG00000047243	ENSHGLG00000045027	ENSHGLG00000000219	ENSHGLG00000035866	ENSHGLG00000032270	ENSHGLG00000046068	ENSHGLG00000045727	ENSHGLG00000035589	TREX2 (ENSHGLG00000008010)	HAUS7 (ENSHGLG00000002908)	BGN (ENSHGLG00000004010)	ATP2B3 (ENSHGLG00000000642)	CCNQ (ENSHGLG00000003517)	DUSP9 (ENSHGLG00000004236)
Laurasiatheria	ANCESTRAL SPECIES	25	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000156560 #22
Common shrew	MODERN SPECIES	7109																KCNK2 (ENSSARG00000014238) #22
Hedgehog	MODERN SPECIES	8998																KCNK2 (ENSEEUG00000010811) #22
Laurasiatheria_a	ANCESTRAL SPECIES		ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT01030000234606.b	ENSGT00390000010743.a	ENSGT00940000156236	ENSGT00390000012568	ENSGT00730000111014	ENSGT00990000204652	ENSGT00530000063751.a	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00530000063646.a	ENSGT00940000154499	ENSGT00940000154149.b.a	ENSGT00940000159391	ENSGT00390000014594
Artiodactyla	ANCESTRAL SPECIES		ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT01030000234606.b	ENSGT00390000010743.a	ENSGT00940000156236	ENSGT00390000012568	ENSGT00730000111014	ENSGT00990000204652	ENSGT00530000063751.a	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00530000063646.a	ENSGT00940000154499	ENSGT00940000154149.b.a	ENSGT00940000159391	ENSGT00390000014594
Suina	ANCESTRAL SPECIES	15	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT01030000234606.b	ENSGT00390000010743.a	ENSGT00940000156236	ENSGT00390000012568	ENSGT00730000111014	ENSGT00530000063751.a	ENSGT00940000154614	ENSGT00950000185732	ENSGT00940000155635	ENSGT00390000001254	ENSGT00530000063646.a	ENSGT00940000154499	ENSGT00940000154149.b.a	ENSGT00940000159391	ENSGT00390000014594
Chacoan peccary	MODERN SPECIES	102	NENF (ENSCWAG00000007956) #7	ATF3 (ENSCWAG00000007808) #8	ENSCWAG00000007772 #9	BATF3 (ENSCWAG00000007743) #10	NSL1 (ENSCWAG00000021373) #11	TATDN3 (ENSCWAG00000021346)	SPATA45 (ENSCWAG00000021330) #13	FLVCR1 (ENSCWAG00000021319) #14	VASH2 (ENSCWAG00000021305) #15	ANGEL2 (ENSCWAG00000021291) #16	RPS6KC1 (ENSCWAG00000021246) #17	PROX1 (ENSCWAG00000021228) #18	SMYD2 (ENSCWAG00000021219) #19	PTPN14 (ENSCWAG00000021202) #20	CENPF (ENSCWAG00000021183) #21	KCNK2 (ENSCWAG00000021158) #22	PLA2G4A (ENSCWAG00000021126)	PTGS2 (ENSCWAG00000021110)	PDC (ENSCWAG00000021098)	ODR4 (ENSCWAG00000021064)	TPR (ENSCWAG00000021028)	ENSCWAG00000021006	HMCN1 (ENSCWAG00000020583)	ENSCWAG00000020542	IVNS1ABP (ENSCWAG00000020529)	SWT1 (ENSCWAG00000020520)	TRMT1L (ENSCWAG00000020507)	RNF2 (ENSCWAG00000020489)	NIBAN1 (ENSCWAG00000020469)	EDEM3 (ENSCWAG00000020403)	C1orf21 (ENSCWAG00000020381)
Pig	MODERN SPECIES	17	PACC1 (ENSSSCG00000015598)	ATF3 (ENSSSCG00000015595) #8	ENSSSCG00000059329 #9	BATF3 (ENSSSCG00000026587) #10	NSL1 (ENSSSCG00000015593) #11	TATDN3 (ENSSSCG00000015592)	SPATA45 (ENSSSCG00000015591) #13	FLVCR1 (ENSSSCG00000015590) #14	VASH2 (ENSSSCG00000015589) #15	ANGEL2 (ENSSSCG00000015588) #16	RPS6KC1 (ENSSSCG00000015586) #17	PROX1 (ENSSSCG00000015584) #18	SMYD2 (ENSSSCG00000015583) #19	PTPN14 (ENSSSCG00000015582) #20	CENPF (ENSSSCG00000015581) #21	KCNK2 (ENSSSCG00000023451) #22	PLA2G4A (ENSSSCG00000023351)	PTGS2 (ENSSSCG00000015579)	ENSSSCG00000039898	PDC (ENSSSCG00000015578)	ODR4 (ENSSSCG00000015577)	TPR (ENSSSCG00000015576)	ENSSSCG00000029449	ENSSSCG00000045604	ENSSSCG00000050098	HMCN1 (ENSSSCG00000035595)	ENSSSCG00000028670	ENSSSCG00000056307	ENSSSCG00000050946	IVNS1ABP (ENSSSCG00000015570)	SWT1 (ENSSSCG00000015569)
Artiodactyla_a	ANCESTRAL SPECIES		ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT01030000234606.b	ENSGT00390000010743.a	ENSGT00940000156236	ENSGT00390000012568	ENSGT00730000111014	ENSGT00990000204652	ENSGT00530000063751.a	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00530000063646.a	ENSGT00940000154499	ENSGT00940000154149.b.a	ENSGT00940000159391	ENSGT00390000014594
Artiodactyla_b	ANCESTRAL SPECIES		ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT01030000234606.b	ENSGT00390000010743.a	ENSGT00940000156236	ENSGT00390000012568	ENSGT00730000111014	ENSGT00990000204652	ENSGT00530000063751.a	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00530000063646.a	ENSGT00940000154499	ENSGT00940000154149.b.a	ENSGT00940000159391	ENSGT00390000014594
Cetacea	ANCESTRAL SPECIES		ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374.b #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT01030000234606.b	ENSGT00390000010743.a	ENSGT00940000156236	ENSGT00390000012568	ENSGT00730000111014	ENSGT00530000063751.a	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00530000063646.a	ENSGT00940000154499	ENSGT00940000165878	ENSGT00940000154149.b.a	ENSGT00940000159391	ENSGT00390000014594
Odontoceti	ANCESTRAL SPECIES		ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374.b #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT01030000234606.b	ENSGT00390000010743.a	ENSGT00940000156236	ENSGT00390000012568	ENSGT00730000111014	ENSGT00530000063751.a	ENSGT00390000011010.b.r	ENSGT00940000165095	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00530000063646.a	ENSGT00940000154499	ENSGT00940000165878	ENSGT00940000154149.b.a
Odontoceti_a	ANCESTRAL SPECIES		ENSGT00390000017528	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374.b #11	ENSGT00720000108846.a	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT01030000234606.b	ENSGT00390000010743.a	ENSGT00940000156236	ENSGT00390000012568	ENSGT00730000111014	ENSGT00530000063751.a	ENSGT00390000011010.b.r	ENSGT00940000165095	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00530000063646.a	ENSGT00940000154499	ENSGT00940000165878	ENSGT00940000154149.b.a
Odontoceti_b	ANCESTRAL SPECIES		ENSGT00940000156376 #8	ENSGT00940000162770.d.a.b.a #9	ENSGT00940000161120 #10	ENSGT00390000001374.b #11	ENSGT00720000108846.a	ENSGT01030000234625.B.c #14	ENSGT00940000164345.b	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT01010000228810	ENSGT00940000156560 #22	ENSGT01030000234606.b	ENSGT00390000010743.a	ENSGT00940000156236	ENSGT00390000012568	ENSGT00730000111014	ENSGT00530000063751.a	ENSGT00390000011010.b.r	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00530000063646.a	ENSGT00940000154499	ENSGT00940000165878	ENSGT00940000154149.b.a	ENSGT00940000159391
Monodontidae	ANCESTRAL SPECIES		ENSGT00940000156376 #8	ENSGT00940000161120 #10	ENSGT00390000001374.b #11	ENSGT00720000108846.a	ENSGT01030000234625.B.c #14	ENSGT00940000164345.b	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000162770.d.a.b.a #9	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT01010000228810	ENSGT00940000156560 #22	ENSGT01030000234606.b	ENSGT00390000010743.a	ENSGT00940000156236	ENSGT00390000012568	ENSGT00730000111014	ENSGT00530000063751.a	ENSGT00940000154614	ENSGT00390000011010.b.r	ENSGT00940000155635	ENSGT00390000001254	ENSGT00530000063646.a	ENSGT00940000154499	ENSGT00940000165878	ENSGT00940000154149.b.a	ENSGT00940000159391
Beluga whale	MODERN SPECIES	27	ATF3 (ENSDLEG00000005236) #8	BATF3 (ENSDLEG00000005232) #10	NSL1 (ENSDLEG00000005221) #11	TATDN3 (ENSDLEG00000005209)	FLVCR1 (ENSDLEG00000005195) #14	ENSDLEG00000005192	VASH2 (ENSDLEG00000005184) #15	ANGEL2 (ENSDLEG00000005172) #16	RPS6KC1 (ENSDLEG00000005167) #17	ENSDLEG00000005159 #9	PROX1 (ENSDLEG00000005155) #18	SMYD2 (ENSDLEG00000005142) #19	PTPN14 (ENSDLEG00000005130) #20	CENPF (ENSDLEG00000005094) #21	ENSDLEG00000005084	KCNK2 (ENSDLEG00000005077) #22	PLA2G4A (ENSDLEG00000005068)	PTGS2 (ENSDLEG00000005058)	ENSDLEG00000005053	PDC (ENSDLEG00000005043)	CUNH1orf27 (ENSDLEG00000005037)	TPR (ENSDLEG00000004878)	ENSDLEG00000004856	ENSDLEG00000004839	ENSDLEG00000020965	HMCN1 (ENSDLEG00000020934)	IVNS1ABP (ENSDLEG00000020893)	SWT1 (ENSDLEG00000020845)	TRMT1L (ENSDLEG00000020807)	RNF2 (ENSDLEG00000020798)	ENSDLEG00000020793
Narwhal	MODERN SPECIES	304	NENF (ENSMMNG00015019225) #7	ATF3 (ENSMMNG00015019269) #8	BATF3 (ENSMMNG00015019336) #10	NSL1 (ENSMMNG00015019362) #11	TATDN3 (ENSMMNG00015019427)	FLVCR1 (ENSMMNG00015019473) #14	VASH2 (ENSMMNG00015019521) #15	ANGEL2 (ENSMMNG00015019589) #16	RPS6KC1 (ENSMMNG00015019616) #17	ENSMMNG00015019666 #9	PROX1 (ENSMMNG00015019673) #18	SMYD2 (ENSMMNG00015019693) #19	PTPN14 (ENSMMNG00015019713) #20	CENPF (ENSMMNG00015019788) #21	ENSMMNG00015019879	KCNK2 (ENSMMNG00015019914) #22	ENSMMNG00015019957	ENSMMNG00015019980	PLA2G4A (ENSMMNG00015019995)	PTGS2 (ENSMMNG00015020023)	PDC (ENSMMNG00015020042)	ODR4 (ENSMMNG00015009258)	TPR (ENSMMNG00015009293)	PRG4 (ENSMMNG00015009329)	HMCN1 (ENSMMNG00015009447)	ENSMMNG00015009512	IVNS1ABP (ENSMMNG00015009537)	SWT1 (ENSMMNG00015009595)	TRMT1L (ENSMMNG00015009609)	RNF2 (ENSMMNG00015009663)	ENSMMNG00015009680
Vaquita	MODERN SPECIES		BATF3 (ENSPSNG00000005108) #10	NSL1 (ENSPSNG00000005089) #11	TATDN3 (ENSPSNG00000005047)	FLVCR1 (ENSPSNG00000004997) #14	ENSPSNG00000004972	VASH2 (ENSPSNG00000004908) #15	ANGEL2 (ENSPSNG00000004864) #16	RPS6KC1 (ENSPSNG00000004780) #17	ENSPSNG00000004733 #9	PROX1 (ENSPSNG00000004714) #18	SMYD2 (ENSPSNG00000004685) #19	ENSPSNG00000004642 #20	ENSPSNG00000004626 #20	CENPF (ENSPSNG00000004592) #21	ENSPSNG00000004575	KCNK2 (ENSPSNG00000004556) #22	ENSPSNG00000004538	PLA2G4A (ENSPSNG00000004509)	PTGS2 (ENSPSNG00000004466)	ENSPSNG00000004446	ODR4 (ENSPSNG00000004359)	TPR (ENSPSNG00000004223)	ENSPSNG00000004150	ENSPSNG00000004130	HMCN1 (ENSPSNG00000004051)	ENSPSNG00000003997	ENSPSNG00000003994	IVNS1ABP (ENSPSNG00000003960)	SWT1 (ENSPSNG00000003932)	TRMT1L (ENSPSNG00000003791)	RNF2 (ENSPSNG00000003687)
Dolphin	MODERN SPECIES	2890																KCNK2 (ENSTTRG00000009098) #22
Sperm whale	MODERN SPECIES	15	PPP2R5A (ENSPCTG00005003839)	TMEM206 (ENSPCTG00005003816)	ATF3 (ENSPCTG00005003791) #8	BATF3 (ENSPCTG00005003779) #10	NSL1 (ENSPCTG00005003768) #11	TATDN3 (ENSPCTG00005003740)	SPATA45 (ENSPCTG00005003721) #13	FLVCR1 (ENSPCTG00005003708) #14	VASH2 (ENSPCTG00005003680) #15	ANGEL2 (ENSPCTG00005003641) #16	RPS6KC1 (ENSPCTG00005003591) #17	PROX1 (ENSPCTG00005003580) #18	SMYD2 (ENSPCTG00005003567) #19	PTPN14 (ENSPCTG00005003527) #20	CENPF (ENSPCTG00005003467) #21	KCNK2 (ENSPCTG00005003432) #22	PLA2G4A (ENSPCTG00005003343)	PTGS2 (ENSPCTG00005003319)	PDC (ENSPCTG00005003309)	ODR4 (ENSPCTG00005003254)	TPR (ENSPCTG00005003205)	ENSPCTG00005003189	ENSPCTG00005003178	HMCN1 (ENSPCTG00005003155)	IVNS1ABP (ENSPCTG00005003106)	SWT1 (ENSPCTG00005003065)	TRMT1L (ENSPCTG00005003038)	RNF2 (ENSPCTG00005003021)	FAM129A (ENSPCTG00005002999)	EDEM3 (ENSPCTG00005002974)	C4H1orf21 (ENSPCTG00005002961)
Blue whale	MODERN SPECIES		NENF (ENSBMSG00010002661) #7	ATF3 (ENSBMSG00010002626) #8	BATF3 (ENSBMSG00010002581) #10	ENSBMSG00010002561 #11	TATDN3 (ENSBMSG00010002497)	SPATA45 (ENSBMSG00010002443) #13	FLVCR1 (ENSBMSG00010002424) #14	ENSBMSG00010002385	VASH2 (ENSBMSG00010002235) #15	ANGEL2 (ENSBMSG00010002179) #16	RPS6KC1 (ENSBMSG00010002148) #17	PROX1 (ENSBMSG00010002126) #18	SMYD2 (ENSBMSG00010002033) #19	PTPN14 (ENSBMSG00010002010) #20	CENPF (ENSBMSG00010001984) #21	KCNK2 (ENSBMSG00010001955) #22	PLA2G4A (ENSBMSG00010001939)	ENSBMSG00010001919	PTGS2 (ENSBMSG00010001902)	PDC (ENSBMSG00010001886)	ENSBMSG00010001875	ODR4 (ENSBMSG00010001834)	TPR (ENSBMSG00010001604)	PRG4 (ENSBMSG00010001505)	ENSBMSG00010001487	ENSBMSG00010001467	HMCN1 (ENSBMSG00010001306)	ENSBMSG00010001208	IVNS1ABP (ENSBMSG00010001150)	ENSBMSG00010001106	TRMT1L (ENSBMSG00010001076)
Pecora	ANCESTRAL SPECIES	33	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT01030000234606.b	ENSGT00390000010743.a	ENSGT00940000156236	ENSGT00390000012568	ENSGT00730000111014	ENSGT00990000204652	ENSGT00530000063751.a	ENSGT00970000194703	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00530000063646.a	ENSGT00940000154499	ENSGT00940000154149.b.a	ENSGT00940000159391
Percora_a	ANCESTRAL SPECIES	15	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT01030000234606.b	ENSGT00390000010743.a	ENSGT01000000216183.a	ENSGT00940000156236	ENSGT00390000012568	ENSGT00730000111014	ENSGT00990000204652	ENSGT00530000063751.a	ENSGT00970000194703	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00530000063646.a	ENSGT00940000154499	ENSGT00940000154149.b.a
Bovidae	ANCESTRAL SPECIES	15	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT01030000234606.b	ENSGT00390000010743.a	ENSGT01000000216183.a	ENSGT00940000156236	ENSGT00390000012568	ENSGT00730000111014	ENSGT00990000204652	ENSGT00530000063751.a	ENSGT00970000194703	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00530000063646.a	ENSGT00940000154499	ENSGT00940000154149.b.a
Caprinae	ANCESTRAL SPECIES	12	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT01030000234606.b	ENSGT00390000010743.a	ENSGT01000000216183.a	ENSGT00940000156236	ENSGT00390000012568	ENSGT00730000111014	ENSGT00530000063751.a	ENSGT00970000194703	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00530000063646.a	ENSGT00940000154499	ENSGT00940000154149.b.a	ENSGT00940000159391
Goat	MODERN SPECIES	7	NENF (ENSCHIG00000025026) #7	ATF3 (ENSCHIG00000015367) #8	GARIN4 (ENSCHIG00000011288) #9	BATF3 (ENSCHIG00000019379) #10	NSL1 (ENSCHIG00000015806) #11	TATDN3 (ENSCHIG00000012673)	SPATA45 (ENSCHIG00000012564) #13	FLVCR1 (ENSCHIG00000024444) #14	VASH2 (ENSCHIG00000011863) #15	ANGEL2 (ENSCHIG00000015562) #16	RPS6KC1 (ENSCHIG00000014648) #17	PROX1 (ENSCHIG00000021581) #18	SMYD2 (ENSCHIG00000018913) #19	PTPN14 (ENSCHIG00000013844) #20	CENPF (ENSCHIG00000012476) #21	KCNK2 (ENSCHIG00000021436) #22	PLA2G4A (ENSCHIG00000026282)	PTGS2 (ENSCHIG00000023277)	PDC (ENSCHIG00000009984)	ODR4 (ENSCHIG00000014516)	TPR (ENSCHIG00000014240)	PRG4 (ENSCHIG00000010860)	ENSCHIG00000016570	HMCN1 (ENSCHIG00000023131)	IVNS1ABP (ENSCHIG00000025228)	SWT1 (ENSCHIG00000023511)	TRMT1L (ENSCHIG00000016522)	ENSCHIG00000011390	NIBAN1 (ENSCHIG00000015391)	EDEM3 (ENSCHIG00000014241)	ENSCHIG00000000866
Rambouillet Sheep	MODERN SPECIES	3	C1orf74 (ENSOARG00020019909)	ENSOARG00020019761	UTP25 (ENSOARG00020019628)	SYT14 (ENSOARG00020019477)	SERTAD4 (ENSOARG00020019447)	KCNH1 (ENSOARG00020018286)	ENSOARG00020018204	RCOR3 (ENSOARG00020017402)	TRAF5 (ENSOARG00020017026)	RD3 (ENSOARG00020016974)	SLC30A1 (ENSOARG00020016940)	PROX1 (ENSOARG00020016871) #18	SMYD2 (ENSOARG00020016785) #19	PTPN14 (ENSOARG00020016706) #20	CSNK1A1 (ENSOARG00020016517)	KCNK2 (ENSOARG00020016271) #22	PLA2G4A (ENSOARG00020016112)	PTGS2 (ENSOARG00020015961)	ENSOARG00020015900	PDC (ENSOARG00020015837)	ODR4 (ENSOARG00020015548)	TPR (ENSOARG00020015200)	ENSOARG00020015135	HMCN1 (ENSOARG00020007150)	IVNS1ABP (ENSOARG00020006631)	TRMT1L (ENSOARG00020006285)	RNF2 (ENSOARG00020006226)	NIBAN1 (ENSOARG00020006182)	EDEM3 (ENSOARG00020005876)	C1orf21 (ENSOARG00020005833)	TSEN15 (ENSOARG00020005591)
Bovinae	ANCESTRAL SPECIES	12	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT01030000234606.b	ENSGT00390000010743.a	ENSGT00940000156236	ENSGT00390000012568	ENSGT00730000111014	ENSGT00990000204652	ENSGT00530000063751.a	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00530000063646.a	ENSGT00940000154499	ENSGT00940000154149.b.a	ENSGT00940000159391	ENSGT00390000014594
Bos	ANCESTRAL SPECIES	12	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT01100000263481.n.b.a.a.b	ENSGT00940000157082 #19	ENSGT01100000263480.a.a.b.a.a.a.b.b.b.a.a.a.a	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT01030000234606.b	ENSGT00390000010743.a	ENSGT00940000156236	ENSGT00390000012568	ENSGT00730000111014	ENSGT00990000204652	ENSGT00530000063751.a	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00530000063646.a	ENSGT00940000154499	ENSGT00940000154149.b.a	ENSGT00940000159391	ENSGT00390000014594
Bos_a	ANCESTRAL SPECIES	8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT01100000263481.n.b.a.a.b	ENSGT00940000157082 #19	ENSGT01100000263480.a.a.b.a.a.a.b.b.b.a.a.a.a	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT01030000234606.b	ENSGT00390000010743.a	ENSGT00940000156236	ENSGT00390000012568	ENSGT00730000111014	ENSGT00990000204652	ENSGT00530000063751.a	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00530000063646.a	ENSGT00940000154499	ENSGT00940000154149.b.a	ENSGT00940000159391	ENSGT00390000014594
Domestic yak	MODERN SPECIES	5	GARIN4 (ENSBGRG00000021184) #9	ENSBGRG00000021111 #10	NSL1 (ENSBGRG00000021044) #11	TATDN3 (ENSBGRG00000020764)	SPATA45 (ENSBGRG00000020720) #13	FLVCR1 (ENSBGRG00000020614) #14	VASH2 (ENSBGRG00000020510) #15	ANGEL2 (ENSBGRG00000020402) #16	RPS6KC1 (ENSBGRG00000020152) #17	PROX1 (ENSBGRG00000020065) #18	ENSBGRG00000020049	SMYD2 (ENSBGRG00000019833) #19	ENSBGRG00000019804	PTPN14 (ENSBGRG00000019676) #20	CENPF (ENSBGRG00000019358) #21	KCNK2 (ENSBGRG00000019112) #22	PLA2G4A (ENSBGRG00000018857)	PTGS2 (ENSBGRG00000018786)	PDC (ENSBGRG00000018729)	ODR4 (ENSBGRG00000018391)	TPR (ENSBGRG00000018185)	ENSBGRG00000018146	ENSBGRG00000018032	HMCN1 (ENSBGRG00000016713)	IVNS1ABP (ENSBGRG00000016348)	SWT1 (ENSBGRG00000016059)	TRMT1L (ENSBGRG00000015686)	RNF2 (ENSBGRG00000015546)	NIBAN1 (ENSBGRG00000015406)	ENSBGRG00000015374	EDEM3 (ENSBGRG00000015064)
Wild yak	MODERN SPECIES	1265											ENSBMUG00000022539	PROX1 (ENSBMUG00000022529) #18	SMYD2 (ENSBMUG00000022509) #19	PTPN14 (ENSBMUG00000022468) #20	CENPF (ENSBMUG00000022412) #21	KCNK2 (ENSBMUG00000022388) #22	PLA2G4A (ENSBMUG00000022346)	ENSBMUG00000022310	PTGS2 (ENSBMUG00000022305)
Bos_b	ANCESTRAL SPECIES	27	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT01100000263481.n.b.a.a.b	ENSGT00940000157082 #19	ENSGT01100000263480.a.a.b.a.a.a.b.b.b.a.a.a.a	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT01030000234606.b	ENSGT00390000010743.a	ENSGT00940000156236	ENSGT00390000012568	ENSGT01100000263506.a.e.a.a.b.b.c.a	ENSGT00730000111014	ENSGT00530000063751.a	ENSGT00940000154614	ENSGT00390000002398.f.b.a	ENSGT00940000155635	ENSGT00390000001254	ENSGT00530000063646.a	ENSGT00940000154499	ENSGT00940000154149.b.a	ENSGT00940000159391
Hybrid Bos Indicus	MODERN SPECIES	7	GARIN4 (ENSBIXG00005024742) #9	BATF3 (ENSBIXG00005024775) #10	NSL1 (ENSBIXG00005007082) #11	TATDN3 (ENSBIXG00005024928)	SPATA45 (ENSBIXG00005024959) #13	FLVCR1 (ENSBIXG00005004258) #14	VASH2 (ENSBIXG00005025071) #15	ANGEL2 (ENSBIXG00005025180) #16	RPS6KC1 (ENSBIXG00005025469) #17	PROX1 (ENSBIXG00005004362) #18	ENSBIXG00005025653	SMYD2 (ENSBIXG00005025677) #19	ENSBIXG00005025689	PTPN14 (ENSBIXG00005025759) #20	CENPF (ENSBIXG00005007633) #21	KCNK2 (ENSBIXG00005026006) #22	PLA2G4A (ENSBIXG00005026089)	PTGS2 (ENSBIXG00005026136)	PDC (ENSBIXG00005026156)	ODR4 (ENSBIXG00005026230)	ENSBIXG00005007200	TPR (ENSBIXG00005026389)	ENSBIXG00005026453	HMCN1 (ENSBIXG00005026493)	ENSBIXG00005026571	IVNS1ABP (ENSBIXG00005026619)	SWT1 (ENSBIXG00005004559)	TRMT1L (ENSBIXG00005004576)	RNF2 (ENSBIXG00005026823)	NIBAN1 (ENSBIXG00005026863)	EDEM3 (ENSBIXG00005004611)
Cow	MODERN SPECIES	7	PACC1 (ENSBTAG00000000758)	NENF (ENSBTAG00000000759) #7	ATF3 (ENSBTAG00000008545) #8	BATF3 (ENSBTAG00000011982) #10	NSL1 (ENSBTAG00000011340) #11	TATDN3 (ENSBTAG00000024443)	SPATA45 (ENSBTAG00000010016) #13	FLVCR1 (ENSBTAG00000015974) #14	VASH2 (ENSBTAG00000003701) #15	ANGEL2 (ENSBTAG00000003702) #16	RPS6KC1 (ENSBTAG00000001181) #17	PROX1 (ENSBTAG00000010978) #18	SMYD2 (ENSBTAG00000013166) #19	PTPN14 (ENSBTAG00000021553) #20	CENPF (ENSBTAG00000024449) #21	KCNK2 (ENSBTAG00000004407) #22	PLA2G4A (ENSBTAG00000013298)	PTGS2 (ENSBTAG00000014127)	PDC (ENSBTAG00000004176)	ODR4 (ENSBTAG00000011946)	ENSBTAG00000047559	PRG4 (ENSBTAG00000011932)	ENSBTAG00000054031	HMCN1 (ENSBTAG00000015235)	ENSBTAG00000045729	IVNS1ABP (ENSBTAG00000014249)	SWT1 (ENSBTAG00000004492)	TRMT1L (ENSBTAG00000011285)	RNF2 (ENSBTAG00000000023)	NIBAN1 (ENSBTAG00000014548)	EDEM3 (ENSBTAG00000019264)
American bison	MODERN SPECIES	3236	GARIN4 (ENSBBBG00000006342) #9	BATF3 (ENSBBBG00000008830) #10	NSL1 (ENSBBBG00000024348) #11	TATDN3 (ENSBBBG00000008996)	SPATA45 (ENSBBBG00000006263) #13	FLVCR1 (ENSBBBG00000024087) #14	VASH2 (ENSBBBG00000024010) #15	ANGEL2 (ENSBBBG00000006232) #16	RPS6KC1 (ENSBBBG00000023896) #17	PROX1 (ENSBBBG00000006190) #18	SMYD2 (ENSBBBG00000023759) #19	ENSBBBG00000023741 #20	ENSBBBG00000023733 #20	ENSBBBG00000023727 #20	CENPF (ENSBBBG00000023713) #21	KCNK2 (ENSBBBG00000023686) #22	PLA2G4A (ENSBBBG00000023675)	PTGS2 (ENSBBBG00000023652)	PDC (ENSBBBG00000023637)	ODR4 (ENSBBBG00000023626)	TPR (ENSBBBG00000023530)	ENSBBBG00000023417	ENSBBBG00000023414	HMCN1 (ENSBBBG00000023377)	IVNS1ABP (ENSBBBG00000023274)	SWT1 (ENSBBBG00000023244)	TRMT1L (ENSBBBG00000023207)	RNF2 (ENSBBBG00000023182)	NIBAN1 (ENSBBBG00000000356)	ENSBBBG00000000412	EDEM3 (ENSBBBG00000000431)
Siberian musk deer	MODERN SPECIES	387												PROX1 (ENSMMSG00000012390) #18	SMYD2 (ENSMMSG00000012419) #19	PTPN14 (ENSMMSG00000012483) #20	CENPF (ENSMMSG00000012586) #21	KCNK2 (ENSMMSG00000012676) #22
Yarkand deer	MODERN SPECIES	5	ATF3 (ENSCHYG00000014511) #8	GARIN4 (ENSCHYG00000014489) #9	BATF3 (ENSCHYG00000014453) #10	NSL1 (ENSCHYG00000014242) #11	TATDN3 (ENSCHYG00000013409)	SPATA45 (ENSCHYG00000013280) #13	FLVCR1 (ENSCHYG00000013138) #14	ENSCHYG00000013113	VASH2 (ENSCHYG00000012969) #15	ANGEL2 (ENSCHYG00000012880) #16	RPS6KC1 (ENSCHYG00000012272) #17	PROX1 (ENSCHYG00000012173) #18	SMYD2 (ENSCHYG00000012013) #19	PTPN14 (ENSCHYG00000011756) #20	CENPF (ENSCHYG00000011625) #21	KCNK2 (ENSCHYG00000011476) #22	PLA2G4A (ENSCHYG00000011189)	PTGS2 (ENSCHYG00000011084)	PDC (ENSCHYG00000011029)	ODR4 (ENSCHYG00000010804)	TPR (ENSCHYG00000010259)	ENSCHYG00000010138	ENSCHYG00000010100	HMCN1 (ENSCHYG00000009811)	ENSCHYG00000009772	IVNS1ABP (ENSCHYG00000009539)	SWT1 (ENSCHYG00000009022)	TRMT1L (ENSCHYG00000008696)	RNF2 (ENSCHYG00000008667)	NIBAN1 (ENSCHYG00000023042)	EDEM3 (ENSCHYG00000022794)
Camelidae	ANCESTRAL SPECIES	52	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT01030000234606.b	ENSGT00390000010743.a	ENSGT00940000156236	ENSGT00390000012568	ENSGT00730000111014	ENSGT00530000063751.a	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00530000063646.a	ENSGT00940000154499
Arabian camel	MODERN SPECIES	15	ATF3 (ENSCDRG00005018313) #8	GARIN4 (ENSCDRG00005018296) #9	BATF3 (ENSCDRG00005018273) #10	NSL1 (ENSCDRG00005018177) #11	TATDN3 (ENSCDRG00005018011)	SPATA45 (ENSCDRG00005017983) #13	FLVCR1 (ENSCDRG00005017954) #14	VASH2 (ENSCDRG00005017896) #15	ANGEL2 (ENSCDRG00005017790) #16	RPS6KC1 (ENSCDRG00005017537) #17	ENSCDRG00005017471	PROX1 (ENSCDRG00005017410) #18	SMYD2 (ENSCDRG00005017161) #19	PTPN14 (ENSCDRG00005017064) #20	CENPF (ENSCDRG00005016956) #21	KCNK2 (ENSCDRG00005016790) #22	ENSCDRG00005016749	PLA2G4A (ENSCDRG00005016646)	PTGS2 (ENSCDRG00005016525)	PDC (ENSCDRG00005016460)	ODR4 (ENSCDRG00005016274)	TPR (ENSCDRG00005016006)	ENSCDRG00005015924	ENSCDRG00005015910	HMCN1 (ENSCDRG00005015717)	IVNS1ABP (ENSCDRG00005015575)	SWT1 (ENSCDRG00005015345)	TRMT1L (ENSCDRG00005015223)	RNF2 (ENSCDRG00005015182)	GREM2 (ENSCDRG00005015158)	RGS7 (ENSCDRG00005014699)
Alpaca	MODERN SPECIES	34														PROX1 (ENSVPAG00000010381) #18	CENPF (ENSVPAG00000010384) #21	KCNK2 (ENSVPAG00000010387) #22
Laurasiatheria_b	ANCESTRAL SPECIES		ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT01030000234606.b	ENSGT00390000010743.a	ENSGT00940000156236	ENSGT00390000012568	ENSGT00730000111014	ENSGT00990000204652	ENSGT00530000063751.a	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00530000063646.a	ENSGT00940000154499	ENSGT00940000154149.b.a	ENSGT00940000159391	ENSGT00390000014594
Laurasiatheria_c	ANCESTRAL SPECIES		ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT01030000234606.b	ENSGT00390000010743.a	ENSGT00940000156236	ENSGT00390000012568	ENSGT00730000111014	ENSGT00530000063751.a	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00530000063646.a	ENSGT00940000154499	ENSGT00940000154149.b.a	ENSGT00940000159391	ENSGT00390000014594	ENSGT00390000014781
Equus	ANCESTRAL SPECIES	33	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT00950000183198.c.b.a.u.a	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT01030000234606.b	ENSGT00390000010743.a	ENSGT00940000156236	ENSGT00390000012568	ENSGT00730000111014	ENSGT00530000063751.a.h	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00530000063646.a	ENSGT00940000154499	ENSGT00940000154149.b.a	ENSGT00940000159391	ENSGT00390000014594	ENSGT00390000014781
Donkey	MODERN SPECIES	17	ATF3 (ENSEASG00005002809) #8	GARIN4 (ENSEASG00005002812) #9	BATF3 (ENSEASG00005038008) #10	NSL1 (ENSEASG00005002819) #11	TATDN3 (ENSEASG00005002825)	SPATA45 (ENSEASG00005024302) #13	ENSEASG00005002833	FLVCR1 (ENSEASG00005002836) #14	VASH2 (ENSEASG00005002846) #15	ANGEL2 (ENSEASG00005002856) #16	RPS6KC1 (ENSEASG00005002866) #17	PROX1 (ENSEASG00005030708) #18	SMYD2 (ENSEASG00005002894) #19	PTPN14 (ENSEASG00005003087) #20	CENPF (ENSEASG00005003253) #21	ENSEASG00005003260 #22	ENSEASG00005003268	ENSEASG00005003470	PTGS2 (ENSEASG00005005459)	PDC (ENSEASG00005005464)	ODR4 (ENSEASG00005005469)	TPR (ENSEASG00005005475)	ENSEASG00005005489	ENSEASG00005024699	HMCN1 (ENSEASG00005027535)	IVNS1ABP (ENSEASG00005005527)	SWT1 (ENSEASG00005005530)	TRMT1L (ENSEASG00005005551)	RNF2 (ENSEASG00005005698)	NIBAN1 (ENSEASG00005005707)	EDEM3 (ENSEASG00005005781)
Horse	MODERN SPECIES	26	ATF3 (ENSECAG00000011486) #8	GARIN4 (ENSECAG00000011089) #9	BATF3 (ENSECAG00000011042) #10	NSL1 (ENSECAG00000009355) #11	TATDN3 (ENSECAG00000008513)	SPATA45 (ENSECAG00000038528) #13	ENSECAG00000033183	FLVCR1 (ENSECAG00000017787) #14	ANGEL2 (ENSECAG00000010723) #16	VASH2 (ENSECAG00000015846) #15	RPS6KC1 (ENSECAG00000021706) #17	PROX1 (ENSECAG00000019220) #18	SMYD2 (ENSECAG00000022049) #19	PTPN14 (ENSECAG00000007687) #20	CENPF (ENSECAG00000024127) #21	KCNK2 (ENSECAG00000023472) #22	ENSECAG00000031761	PLA2G4A (ENSECAG00000024810)	PTGS2 (ENSECAG00000017181)	PDC (ENSECAG00000015729)	ODR4 (ENSECAG00000008289)	TPR (ENSECAG00000020724)	ENSECAG00000020648	ENSECAG00000044821	HMCN1 (ENSECAG00000007173)	IVNS1ABP (ENSECAG00000018870)	SWT1 (ENSECAG00000012085)	TRMT1L (ENSECAG00000020999)	RNF2 (ENSECAG00000014782)	NIBAN1 (ENSECAG00000007385)	EDEM3 (ENSECAG00000018383)
Chiroptera	ANCESTRAL SPECIES	22	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT01030000234606.b	ENSGT00390000010743.a	ENSGT00940000156236	ENSGT00390000012568	ENSGT00730000111014	ENSGT00530000063751.a	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00530000063646.a	ENSGT00940000154499	ENSGT00940000154149.b.a	ENSGT00940000159391	ENSGT00390000014594	ENSGT00390000014781
Microchiroptera	ANCESTRAL SPECIES	22	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT01030000234606.b	ENSGT00390000010743.a	ENSGT00940000156236	ENSGT00390000012568	ENSGT00730000111014	ENSGT00530000063751.a	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00530000063646.a	ENSGT00940000154499	ENSGT00940000154149.b.a	ENSGT00940000159391	ENSGT00390000014594	ENSGT00390000014781
Greater horseshoe bat	MODERN SPECIES	14	ATF3 (ENSRFEG00010015691) #8	ENSRFEG00010015625 #9	BATF3 (ENSRFEG00010015564) #10	NSL1 (ENSRFEG00010015474) #11	ENSRFEG00010015432	TATDN3 (ENSRFEG00010015243)	SPATA45 (ENSRFEG00010015162) #13	FLVCR1 (ENSRFEG00010015101) #14	VASH2 (ENSRFEG00010014636) #15	ANGEL2 (ENSRFEG00010014572) #16	RPS6KC1 (ENSRFEG00010014099) #17	PROX1 (ENSRFEG00010013970) #18	SMYD2 (ENSRFEG00010013761) #19	PTPN14 (ENSRFEG00010013663) #20	CENPF (ENSRFEG00010013471) #21	KCNK2 (ENSRFEG00010013369) #22	PLA2G4A (ENSRFEG00010013298)	PTGS2 (ENSRFEG00010013243)	PDC (ENSRFEG00010013111)	ODR4 (ENSRFEG00010012882)	TPR (ENSRFEG00010011972)	PRG4 (ENSRFEG00010011855)	HMCN1 (ENSRFEG00010011748)	IVNS1ABP (ENSRFEG00010011670)	SWT1 (ENSRFEG00010011617)	TRMT1L (ENSRFEG00010011478)	RNF2 (ENSRFEG00010011316)	NIBAN1 (ENSRFEG00010011245)	EDEM3 (ENSRFEG00010011160)	C1orf21 (ENSRFEG00010011116)	ENSRFEG00010010725
Microbat	MODERN SPECIES	1002	ENSMLUG00000009603	ATF3 (ENSMLUG00000015048) #8	GARIN4 (ENSMLUG00000015054) #9	BATF3 (ENSMLUG00000025827) #10	NSL1 (ENSMLUG00000009680) #11	TATDN3 (ENSMLUG00000009692)	SPATA45 (ENSMLUG00000009716) #13	FLVCR1 (ENSMLUG00000009724) #14	ENSMLUG00000002386 #15	ANGEL2 (ENSMLUG00000002393) #16	RPS6KC1 (ENSMLUG00000002406) #17	PROX1 (ENSMLUG00000006993) #18	SMYD2 (ENSMLUG00000017025) #19	PTPN14 (ENSMLUG00000017033) #20	CENPF (ENSMLUG00000017038) #21	KCNK2 (ENSMLUG00000007701) #22	PLA2G4A (ENSMLUG00000007650)	PTGS2 (ENSMLUG00000008204)	PDC (ENSMLUG00000013147)	ODR4 (ENSMLUG00000013135)	TPR (ENSMLUG00000016913)	ENSMLUG00000016901	HMCN1 (ENSMLUG00000016911)	IVNS1ABP (ENSMLUG00000014652)	SWT1 (ENSMLUG00000001142)	TRMT1L (ENSMLUG00000001136)	RNF2 (ENSMLUG00000001129)	NIBAN1 (ENSMLUG00000009348)	EDEM3 (ENSMLUG00000013699)	C1orf21 (ENSMLUG00000013690)	TSEN15 (ENSMLUG00000005573)
Megabat	MODERN SPECIES	7721																KCNK2 (ENSPVAG00000010314) #22
Carnivora	ANCESTRAL SPECIES	14	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00390000012166.o	ENSGT00430000032886	ENSGT00390000012166.p	ENSGT00940000155130	ENSGT00940000159504	ENSGT00940000157906	ENSGT00940000157458	ENSGT00500000044895	ENSGT00390000013003	ENSGT00940000157639	ENSGT00900000141021.a	ENSGT00940000155601	ENSGT00940000163676	ENSGT00390000010047.b	ENSGT00940000161715
Felidae	ANCESTRAL SPECIES	11	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00390000012166.o	ENSGT00430000032886	ENSGT00390000012166.p	ENSGT00940000155130	ENSGT00940000159504	ENSGT00940000157906	ENSGT00940000157458	ENSGT00500000044895	ENSGT00390000013003	ENSGT00940000157639	ENSGT00900000141021.a	ENSGT00940000155601	ENSGT00940000163676	ENSGT00390000010047.b.s	ENSGT00940000161715
Panthera	ANCESTRAL SPECIES	19	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00390000012166.o	ENSGT00430000032886	ENSGT00390000012166.p	ENSGT00940000155130	ENSGT00940000159504	ENSGT00940000157906	ENSGT00940000157458	ENSGT00500000044895	ENSGT00390000013003	ENSGT00940000157639	ENSGT00900000141021.a	ENSGT00940000155601	ENSGT00940000163676	ENSGT00390000010047.b.s	ENSGT00940000161715
Tiger	MODERN SPECIES	521	NENF (ENSPTIG00000019040) #7	ATF3 (ENSPTIG00000019609) #8	ENSPTIG00000004611 #9	BATF3 (ENSPTIG00000005700) #10	NSL1 (ENSPTIG00000006400) #11	TATDN3 (ENSPTIG00000008310)	SPATA45 (ENSPTIG00000010479) #13	FLVCR1 (ENSPTIG00000010910) #14	VASH2 (ENSPTIG00000012122) #15	ANGEL2 (ENSPTIG00000013210) #16	RPS6KC1 (ENSPTIG00000015231) #17	PROX1 (ENSPTIG00000020637) #18	SMYD2 (ENSPTIG00000001732) #19	PTPN14 (ENSPTIG00000007134) #20	CENPF (ENSPTIG00000011051) #21	KCNK2 (ENSPTIG00000013664) #22	TOR1AIP2 (ENSPTIG00000015394)	ENSPTIG00000004327	TOR1AIP1 (ENSPTIG00000016393)	CEP350 (ENSPTIG00000017678)	QSOX1 (ENSPTIG00000018972)	LHX4 (ENSPTIG00000020936)	ACBD6 (ENSPTIG00000021140)	XPR1 (ENSPTIG00000021336)	KIAA1614 (ENSPTIG00000021831)	STX6 (ENSPTIG00000001345)	ENSPTIG00000003503	CACNA1E (ENSPTIG00000005747)	ZNF648 (ENSPTIG00000005301)	GLUL (ENSPTIG00000011772)	TEDDM1 (ENSPTIG00000005307)
Panthera_a	ANCESTRAL SPECIES	19	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00390000012166.o	ENSGT00430000032886	ENSGT00390000012166.p	ENSGT00940000155130	ENSGT00940000159504	ENSGT00940000157906	ENSGT00940000157458	ENSGT00500000044895	ENSGT00390000013003	ENSGT00940000157639	ENSGT00900000141021.a	ENSGT00940000155601	ENSGT00940000163676	ENSGT00390000010047.b.s	ENSGT00940000161715
lion	MODERN SPECIES	17	NENF (ENSPLOG00000018345) #7	ATF3 (ENSPLOG00000018263) #8	ENSPLOG00000018205 #9	BATF3 (ENSPLOG00000018177) #10	NSL1 (ENSPLOG00000018060) #11	TATDN3 (ENSPLOG00000017946)	SPATA45 (ENSPLOG00000017903) #13	FLVCR1 (ENSPLOG00000017866) #14	VASH2 (ENSPLOG00000017598) #15	ANGEL2 (ENSPLOG00000017554) #16	RPS6KC1 (ENSPLOG00000017403) #17	PROX1 (ENSPLOG00000017338) #18	SMYD2 (ENSPLOG00000017235) #19	PTPN14 (ENSPLOG00000017061) #20	CENPF (ENSPLOG00000017000) #21	KCNK2 (ENSPLOG00000016856) #22	TOR1AIP2 (ENSPLOG00000016786)	ENSPLOG00000016766	TOR1AIP1 (ENSPLOG00000016658)	CEP350 (ENSPLOG00000016365)	QSOX1 (ENSPLOG00000016291)	LHX4 (ENSPLOG00000016206)	ENSPLOG00000016177	ACBD6 (ENSPLOG00000016143)	XPR1 (ENSPLOG00000016050)	KIAA1614 (ENSPLOG00000015895)	STX6 (ENSPLOG00000015854)	ENSPLOG00000015683	CACNA1E (ENSPLOG00000012994)	ZNF648 (ENSPLOG00000012807)	GLUL (ENSPLOG00000012648)
leopard	MODERN SPECIES	4	ATF3 (ENSPPRG00000002289) #8	BATF3 (ENSPPRG00000002718) #10	NSL1 (ENSPPRG00000002797) #11	TATDN3 (ENSPPRG00000004462)	SPATA45 (ENSPPRG00000005103) #13	FLVCR1 (ENSPPRG00000005353) #14	VASH2 (ENSPPRG00000005999) #15	ANGEL2 (ENSPPRG00000006421) #16	RPS6KC1 (ENSPPRG00000007642) #17	ENSPPRG00000008943	PROX1 (ENSPPRG00000009669) #18	SMYD2 (ENSPPRG00000009916) #19	PTPN14 (ENSPPRG00000010114) #20	ENSPPRG00000010575 #21	ENSPPRG00000010674 #21	KCNK2 (ENSPPRG00000011471) #22	TOR1AIP2 (ENSPPRG00000011986)	ENSPPRG00000022134	ENSPPRG00000012704	CEP350 (ENSPPRG00000013007)	QSOX1 (ENSPPRG00000013585)	LHX4 (ENSPPRG00000013805)	ACBD6 (ENSPPRG00000014588)	XPR1 (ENSPPRG00000017244)	KIAA1614 (ENSPPRG00000019158)	STX6 (ENSPPRG00000019648)	IER5 (ENSPPRG00000014406)	ENSPPRG00000020609	CACNA1E (ENSPPRG00000000086)	ZNF648 (ENSPPRG00000014537)	ENSPPRG00000002144
Cat	MODERN SPECIES	248	PACC1 (ENSFCAG00000014609)	ATF3 (ENSFCAG00000029636) #8	GARIN4 (ENSFCAG00000029432) #9	BATF3 (ENSFCAG00000040785) #10	NSL1 (ENSFCAG00000026230) #11	TATDN3 (ENSFCAG00000015401)	ENSFCAG00000044441 #13	FLVCR1 (ENSFCAG00000000207) #14	VASH2 (ENSFCAG00000019311) #15	ANGEL2 (ENSFCAG00000000208) #16	RPS6KC1 (ENSFCAG00000011825) #17	PROX1 (ENSFCAG00000029702) #18	SMYD2 (ENSFCAG00000018917) #19	PTPN14 (ENSFCAG00000023866) #20	CENPF (ENSFCAG00000051534) #21	KCNK2 (ENSFCAG00000031853) #22	TOR1AIP2 (ENSFCAG00000042164)	TOR1AIP1 (ENSFCAG00000018463)	CEP350 (ENSFCAG00000014835)	QSOX1 (ENSFCAG00000031957)	LHX4 (ENSFCAG00000036053)	ACBD6 (ENSFCAG00000030568)	XPR1 (ENSFCAG00000011866)	KIAA1614 (ENSFCAG00000011867)	STX6 (ENSFCAG00000011869)	IER5 (ENSFCAG00000042819)	ENSFCAG00000037987	CACNA1E (ENSFCAG00000015444)	ZNF648 (ENSFCAG00000001334)	GLUL (ENSFCAG00000010551)	ENSFCAG00000044446
Caniformia	ANCESTRAL SPECIES	10	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00390000012166.o	ENSGT00430000032886	ENSGT00390000012166.p	ENSGT00940000155130	ENSGT00940000159504	ENSGT00940000157906	ENSGT00940000157458	ENSGT00500000044895	ENSGT00390000013003	ENSGT00940000157639	ENSGT00900000141021.a	ENSGT00940000155601	ENSGT00940000163676	ENSGT00390000010047.b	ENSGT00940000161715
Canidae	ANCESTRAL SPECIES	1	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00390000012166.o	ENSGT00430000032886	ENSGT00390000012166.p	ENSGT00940000155130	ENSGT00940000159504	ENSGT00940000157906	ENSGT00940000157458	ENSGT00500000044895	ENSGT00390000013003	ENSGT00940000157639	ENSGT00950000183198.c.b.a.u	ENSGT00900000141021.a	ENSGT00940000155601	ENSGT00940000163676	ENSGT00390000010047.b
Red fox	MODERN SPECIES	35	ENSVVUG00000007899	ATF3 (ENSVVUG00000007910) #8	ENSVVUG00000007913 #9	BATF3 (ENSVVUG00000007918) #10	ENSVVUG00000007921 #11	TATDN3 (ENSVVUG00000007930)	SPATA45 (ENSVVUG00000007935) #13	FLVCR1 (ENSVVUG00000007944) #14	VASH2 (ENSVVUG00000007952) #15	ANGEL2 (ENSVVUG00000007956) #16	RPS6KC1 (ENSVVUG00000007970) #17	PROX1 (ENSVVUG00000008030) #18	SMYD2 (ENSVVUG00000008062) #19	PTPN14 (ENSVVUG00000008306) #20	CENPF (ENSVVUG00000008374) #21	KCNK2 (ENSVVUG00000008394) #22	ENSVVUG00000008463	TOR1AIP2 (ENSVVUG00000008469)	TOR1AIP1 (ENSVVUG00000008478)	CEP350 (ENSVVUG00000008522)	QSOX1 (ENSVVUG00000008583)	ENSVVUG00000008656	LHX4 (ENSVVUG00000008659)	ACBD6 (ENSVVUG00000008692)	XPR1 (ENSVVUG00000008743)	KIAA1614 (ENSVVUG00000008762)	STX6 (ENSVVUG00000008773)	ENSVVUG00000008779	ENSVVUG00000008786	CACNA1E (ENSVVUG00000008817)	ZNF648 (ENSVVUG00000008839)
Canis_lupus	ANCESTRAL SPECIES	4	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00390000012166.o	ENSGT00430000032886	ENSGT00390000012166.p	ENSGT00940000155130	ENSGT00940000159504	ENSGT00940000157906	ENSGT00940000157458	ENSGT00500000044895	ENSGT00390000013003	ENSGT00940000157639	ENSGT00900000141021.a	ENSGT00940000155601	ENSGT00940000163676	ENSGT00390000010047.b	ENSGT00940000161715
Dingo	MODERN SPECIES	271	ENSCAFG00020013926 #9	BATF3 (ENSCAFG00020013939) #10	ENSCAFG00020013943 #11	TATDN3 (ENSCAFG00020013945)	SPATA45 (ENSCAFG00020013949) #13	FLVCR1 (ENSCAFG00020013952) #14	VASH2 (ENSCAFG00020013980) #15	ANGEL2 (ENSCAFG00020013985) #16	RPS6KC1 (ENSCAFG00020014029) #17	ENSCAFG00020014356 #18	ENSCAFG00020014358 #18	SMYD2 (ENSCAFG00020014364) #19	PTPN14 (ENSCAFG00020014374) #20	ENSCAFG00020014420 #21	ENSCAFG00020014427	KCNK2 (ENSCAFG00020014440) #22	ENSCAFG00020014457	TOR1AIP2 (ENSCAFG00020014460)	ENSCAFG00020014461	TOR1AIP1 (ENSCAFG00020014463)	ENSCAFG00020014465	CEP350 (ENSCAFG00020014473)	QSOX1 (ENSCAFG00020014546)	LHX4 (ENSCAFG00020014557)	ACBD6 (ENSCAFG00020014559)	ENSCAFG00020014563	XPR1 (ENSCAFG00020014566)	KIAA1614 (ENSCAFG00020014576)	ENSCAFG00020014582	ENSCAFG00020014585	IER5 (ENSCAFG00020014586)
Dog	MODERN SPECIES	35	BATF3 (ENSCAFG00845003785) #10	NSL1 (ENSCAFG00845003808) #11	ENSCAFG00845003831	TATDN3 (ENSCAFG00845003857)	ENSCAFG00845001121 #13	FLVCR1 (ENSCAFG00845001151) #14	ENSCAFG00845001182	VASH2 (ENSCAFG00845001231) #15	ANGEL2 (ENSCAFG00845001293) #16	RPS6KC1 (ENSCAFG00845001399) #17	PROX1 (ENSCAFG00845001606) #18	SMYD2 (ENSCAFG00845001630) #19	ENSCAFG00845001638	PTPN14 (ENSCAFG00845001665) #20	CENPF (ENSCAFG00845001752) #21	ENSCAFG00845001892 #22	ENSCAFG00845001932	ENSCAFG00845001949	ENSCAFG00845001973	ENSCAFG00845001988	ENSCAFG00845002008	TOR1AIP1 (ENSCAFG00845002082)	CEP350 (ENSCAFG00845002165)	ENSCAFG00845002252	QSOX1 (ENSCAFG00845002288)	LHX4 (ENSCAFG00845002410)	ACBD6 (ENSCAFG00845002431)	ENSCAFG00845002447	XPR1 (ENSCAFG00845002485)	KIAA1614 (ENSCAFG00845002551)	STX6 (ENSCAFG00845002602)
Caniformia_b	ANCESTRAL SPECIES	8	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00390000012166.o	ENSGT00430000032886	ENSGT00390000012166.p	ENSGT00940000155130	ENSGT00940000159504	ENSGT00940000157906	ENSGT00940000157458	ENSGT00500000044895	ENSGT00390000013003	ENSGT00940000157639	ENSGT00900000141021.a	ENSGT00940000155601	ENSGT00940000163676	ENSGT00390000010047.b	ENSGT00940000161715
Mustelinae	ANCESTRAL SPECIES	88	ENSGT00390000017528	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22
Ferret	MODERN SPECIES	518														CENPF (ENSMPUG00000003030) #21	ENSMPUG00000018754	KCNK2 (ENSMPUG00000003078) #22
American mink	MODERN SPECIES	43	TM206 (ENSNVIG00000004730)	NENF (ENSNVIG00000004737) #7	ATF3 (ENSNVIG00000004753) #8	BATF3 (ENSNVIG00000004806) #10	NSL1 (ENSNVIG00000004815) #11	TATDN3 (ENSNVIG00000004850)	CA227 (ENSNVIG00000005023) #13	FLVCR1 (ENSNVIG00000005037) #14	VASH2 (ENSNVIG00000005082) #15	ANGEL2 (ENSNVIG00000005114) #16	RPS6KC1 (ENSNVIG00000005128) #17	PROX1 (ENSNVIG00000005310) #18	SMYD2 (ENSNVIG00000005342) #19	PTPN14 (ENSNVIG00000005367) #20	CENPF (ENSNVIG00000005412) #21	KCNK2 (ENSNVIG00000005447) #22
Ursidae	ANCESTRAL SPECIES	4	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00390000012166.o	ENSGT00390000012166.p	ENSGT00940000155130	ENSGT00940000159504	ENSGT00940000157906	ENSGT00940000157458	ENSGT00500000044895	ENSGT00390000013003	ENSGT00940000157639	ENSGT00900000141021.a	ENSGT00940000155601	ENSGT00940000163676	ENSGT00390000010047.b	ENSGT00940000161715	ENSGT00940000164414
Ursus	ANCESTRAL SPECIES	77	ENSGT00940000163755	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00390000012166.o	ENSGT00390000012166.p	ENSGT00940000155130	ENSGT00940000159504	ENSGT00940000157906	ENSGT00940000157458	ENSGT00500000044895	ENSGT00390000013003	ENSGT00940000157639	ENSGT00900000141021.a	ENSGT00940000155601	ENSGT00940000163676	ENSGT00390000010047.b	ENSGT00940000161715	ENSGT00940000164414
Polar bear	MODERN SPECIES	230	ENSUMAG00000018069	ATF3 (ENSUMAG00000018064) #8	ENSUMAG00000018059 #9	BATF3 (ENSUMAG00000018055) #10	NSL1 (ENSUMAG00000018042) #11	TATDN3 (ENSUMAG00000018034)	SPATA45 (ENSUMAG00000018025) #13	FLVCR1 (ENSUMAG00000018014) #14	VASH2 (ENSUMAG00000018002) #15	ANGEL2 (ENSUMAG00000017991) #16	RPS6KC1 (ENSUMAG00000017947) #17	PROX1 (ENSUMAG00000017920) #18	SMYD2 (ENSUMAG00000017891) #19	PTPN14 (ENSUMAG00000017744) #20	CENPF (ENSUMAG00000017628) #21	KCNK2 (ENSUMAG00000017613) #22	ENSUMAG00000017601	TOR1AIP2 (ENSUMAG00000017599)	TOR1AIP1 (ENSUMAG00000017588)	CEP350 (ENSUMAG00000017462)	QSOX1 (ENSUMAG00000017423)	LHX4 (ENSUMAG00000017412)	ACBD6 (ENSUMAG00000017394)	XPR1 (ENSUMAG00000017076)	KIAA1614 (ENSUMAG00000017039)	ENSUMAG00000017033	STX6 (ENSUMAG00000017027)	CACNA1E (ENSUMAG00000016658)	ZNF648 (ENSUMAG00000016564)	GLUL (ENSUMAG00000016547)	ENSUMAG00000016541
American black bear	MODERN SPECIES	5202																KCNK2 (ENSUAMG00000018378) #22
Giant Panda	MODERN SPECIES	18	NENF (ENSAMEG00000031283) #7	ATF3 (ENSAMEG00000001342) #8	GARIN4 (ENSAMEG00000020024) #9	BATF3 (ENSAMEG00000001350) #10	NSL1 (ENSAMEG00000023537) #11	TATDN3 (ENSAMEG00000001364)	SPATA45 (ENSAMEG00000001391) #13	FLVCR1 (ENSAMEG00000001394) #14	VASH2 (ENSAMEG00000001425) #15	ANGEL2 (ENSAMEG00000001436) #16	RPS6KC1 (ENSAMEG00000015771) #17	PROX1 (ENSAMEG00000015776) #18	SMYD2 (ENSAMEG00000015788) #19	PTPN14 (ENSAMEG00000015814) #20	CENPF (ENSAMEG00000015869) #21	ENSAMEG00000015760 #22	ENSAMEG00000030026	TOR1AIP1 (ENSAMEG00000002996)	CEP350 (ENSAMEG00000002966)	QSOX1 (ENSAMEG00000002935)	LHX4 (ENSAMEG00000002919)	ACBD6 (ENSAMEG00000002908)	XPR1 (ENSAMEG00000002871)	KIAA1614 (ENSAMEG00000002864)	STX6 (ENSAMEG00000002848)	ENSAMEG00000002844	CACNA1E (ENSAMEG00000007637)	ZNF648 (ENSAMEG00000020151)	GLUL (ENSAMEG00000007695)	ENSAMEG00000029372	ENSAMEG00000024414
Atlantogenata	ANCESTRAL SPECIES	18	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000162770 #9	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000165654	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Xenarthra	ANCESTRAL SPECIES	241					ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b
Armadillo	MODERN SPECIES	2797		ENSDNOG00000041907 #9	ENSDNOG00000003462 #11	TATDN3 (ENSDNOG00000031553)	SPATA45 (ENSDNOG00000003477) #13	FLVCR1 (ENSDNOG00000031484) #14	ENSDNOG00000038786	VASH2 (ENSDNOG00000008969) #15	ANGEL2 (ENSDNOG00000008978) #16	ENSDNOG00000013631 #17	ENSDNOG00000042638	PROX1 (ENSDNOG00000001297) #18	SMYD2 (ENSDNOG00000014059) #19	PTPN14 (ENSDNOG00000014080) #20	CENPF (ENSDNOG00000010010) #21	KCNK2 (ENSDNOG00000008257) #22	KCTD3 (ENSDNOG00000002406) #23	USH2A (ENSDNOG00000002408)	ESRRG (ENSDNOG00000037798)	ENSDNOG00000037766
Sloth	MODERN SPECIES	8026																KCNK2 (ENSCHOG00000003083) #22
Afrotheria	ANCESTRAL SPECIES	140								ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000165654	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Tenrec	MODERN SPECIES	5807																KCNK2 (ENSETEG00000015049) #22
Afrotheria_a	ANCESTRAL SPECIES	141								ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000165654	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Elephant	MODERN SPECIES	548							FLVCR1 (ENSLAFG00000011716) #14	VASH2 (ENSLAFG00000013919) #15	ANGEL2 (ENSLAFG00000013925) #16	RPS6KC1 (ENSLAFG00000021839) #17	PROX1 (ENSLAFG00000006344) #18	SMYD2 (ENSLAFG00000014142) #19	PTPN14 (ENSLAFG00000008102) #20	CENPF (ENSLAFG00000027249) #21	ENSLAFG00000031601	KCNK2 (ENSLAFG00000012174) #22	KCTD3 (ENSLAFG00000001745) #23	ENSLAFG00000027136	ENSLAFG00000026141	ENSLAFG00000001746	ESRRG (ENSLAFG00000007032)	ENSLAFG00000025672	GPATCH2 (ENSLAFG00000003787)	SPATA17 (ENSLAFG00000003789)	ENSLAFG00000014869	TGFB2 (ENSLAFG00000002358)	LYPLAL1 (ENSLAFG00000013086)	SLC30A10 (ENSLAFG00000003957)	EPRS1 (ENSLAFG00000004981)	BPNT1 (ENSLAFG00000011085)	IARS2 (ENSLAFG00000011090)
Hyrax	MODERN SPECIES	7561																KCNK2 (ENSPCAG00000001436) #22
Marsupialia	ANCESTRAL SPECIES	3	ENSGT00390000017528	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e	ENSGT00390000004585
Marsupialia_b	ANCESTRAL SPECIES	6	ENSGT00390000017528	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00390000013770	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Diprotodontia	ANCESTRAL SPECIES	7	ENSGT00390000017528	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00390000013770	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Wallaby	MODERN SPECIES	421																KCNK2 (ENSMEUG00000012191) #22
Diprotodontia_a	ANCESTRAL SPECIES	3	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154859.d	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00390000013770	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Common wonbat	MODERN SPECIES	1035	PACC1 (ENSVURG00010011432)	NENF (ENSVURG00010011416) #7	ATF3 (ENSVURG00010011382) #8	BATF3 (ENSVURG00010011366) #10	NSL1 (ENSVURG00010011350) #11	TATDN3 (ENSVURG00010011308)	FLVCR1 (ENSVURG00010011238) #14	VASH2 (ENSVURG00010011158) #15	ANGEL2 (ENSVURG00010011143) #16	RPS6KC1 (ENSVURG00010010979) #17	ENSVURG00010010926	PROX1 (ENSVURG00010010899) #18	SMYD2 (ENSVURG00010010816) #19	PTPN14 (ENSVURG00010010786) #20	ENSVURG00010010704 #21	KCNK2 (ENSVURG00010010625) #22	ENSVURG00010010581	KCTD3 (ENSVURG00010010541) #23	ENSVURG00010010467	ESRRG (ENSVURG00010010394)	GPATCH2 (ENSVURG00010010365)	ENSVURG00010010341	SPATA17 (ENSVURG00010010330)	ENSVURG00010010307	ENSVURG00010010286	ENSVURG00010010277	LYPLAL1 (ENSVURG00010010262)	ENSVURG00010010247	ENSVURG00010010207	ENSVURG00010010191	ENSVURG00010010139
koala	MODERN SPECIES	125	NENF (ENSPCIG00000013369) #7	ATF3 (ENSPCIG00000013371) #8	BATF3 (ENSPCIG00000030036) #10	NSL1 (ENSPCIG00000030035) #11	TATDN3 (ENSPCIG00000030033)	ENSPCIG00000030031 #13	FLVCR1 (ENSPCIG00000030030) #14	VASH2 (ENSPCIG00000030028) #15	ANGEL2 (ENSPCIG00000030021) #16	RPS6KC1 (ENSPCIG00000030020) #17	ENSPCIG00000030016	PROX1 (ENSPCIG00000030015) #18	SMYD2 (ENSPCIG00000030013) #19	PTPN14 (ENSPCIG00000030011) #20	CENPF (ENSPCIG00000028486) #21	KCNK2 (ENSPCIG00000033427) #22
Tasmanian devil	MODERN SPECIES	3	DTL (ENSSHAG00000004304)	PPP2R5A (ENSSHAG00000007280)	PACC1 (ENSSHAG00000007950)	ENSSHAG00000030030 #8	ENSSHAG00000021860 #10	NSL1 (ENSSHAG00000031501) #11	TATDN3 (ENSSHAG00000029907)	FLVCR1 (ENSSHAG00000030976) #14	VASH2 (ENSSHAG00000012677) #15	ANGEL2 (ENSSHAG00000012912) #16	RPS6KC1 (ENSSHAG00000013922) #17	PROX1 (ENSSHAG00000030877) #18	SMYD2 (ENSSHAG00000017288) #19	PTPN14 (ENSSHAG00000017396) #20	ENSSHAG00000017822 #21	KCNK2 (ENSSHAG00000018337) #22	KCTD3 (ENSSHAG00000018757) #23	ENSSHAG00000028582	ESRRG (ENSSHAG00000010535)	GPATCH2 (ENSSHAG00000015123)	ENSSHAG00000015894	RRP15 (ENSSHAG00000017509)	TGFB2 (ENSSHAG00000017613)	ENSSHAG00000018298	ENSSHAG00000022431	ENSSHAG00000026841	ENSSHAG00000029940	ENSSHAG00000023075	ENSSHAG00000021668	ENSSHAG00000002391	ENSSHAG00000021786
Opossum	MODERN SPECIES	1	BATF3 (ENSMODG00000044517) #10	NSL1 (ENSMODG00000003069) #11	TATDN3 (ENSMODG00000003075)	ENSMODG00000048923 #13	FLVCR1 (ENSMODG00000039454) #14	VASH2 (ENSMODG00000003103) #15	ANGEL2 (ENSMODG00000003145) #16	RPS6KC1 (ENSMODG00000003186) #17	ENSMODG00000047673	PROX1 (ENSMODG00000003211) #18	SMYD2 (ENSMODG00000003237) #19	PTPN14 (ENSMODG00000003269) #20	ENSMODG00000036470	ENSMODG00000003291 #21	ENSMODG00000041266	KCNK2 (ENSMODG00000003329) #22	KCTD3 (ENSMODG00000003356) #23	ENSMODG00000004113	ENSMODG00000042624	ESRRG (ENSMODG00000004163)	GPATCH2 (ENSMODG00000004195)	SPATA17 (ENSMODG00000004247)	RRP15 (ENSMODG00000004288)	TGFB2 (ENSMODG00000004307)	LYPLAL1 (ENSMODG00000036911)	SLC30A10 (ENSMODG00000004329)	EPRS1 (ENSMODG00000004398)	BPNT1 (ENSMODG00000004414)	IARS2 (ENSMODG00000004467)	RAB3GAP2 (ENSMODG00000004508)	ENSMODG00000045599
Platypus	MODERN SPECIES	10	ATF3 (ENSOANG00000040285) #8	PACC1 (ENSOANG00000037820)	BATF3 (ENSOANG00000045778) #10	NSL1 (ENSOANG00000049937) #11	TATDN3 (ENSOANG00000008509)	ENSOANG00000043660	FLVCR1 (ENSOANG00000008510) #14	VASH2 (ENSOANG00000008512) #15	ANGEL2 (ENSOANG00000008513) #16	RPS6KC1 (ENSOANG00000008515) #17	PROX1 (ENSOANG00000008518) #18	SMYD2 (ENSOANG00000008519) #19	PTPN14 (ENSOANG00000008522) #20	ENSOANG00000008524 #21	ENSOANG00000037449	KCNK2 (ENSOANG00000008527) #22	KCTD3 (ENSOANG00000008530) #23	ENSOANG00000008536	ESRRG (ENSOANG00000037936)	GPATCH2 (ENSOANG00000045673)	SPATA17 (ENSOANG00000008551)	RRP15 (ENSOANG00000008552)	TGFB2 (ENSOANG00000003782)	ENSOANG00000037826	EPRS1 (ENSOANG00000001424)	BPNT1 (ENSOANG00000001425)	IARS2 (ENSOANG00000001426)	RAB3GAP2 (ENSOANG00000001428)	MARK1 (ENSOANG00000001429)	MTARC2 (ENSOANG00000001433)	MTARC1 (ENSOANG00000001434)
Sauria	ANCESTRAL SPECIES	1	ENSGT00940000156376 #8	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00960000188973	ENSGT00720000108846.b	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00940000174613	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000179241	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910
Archelosauria	ANCESTRAL SPECIES	1	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00960000188973	ENSGT00720000108846.b	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.a.b ##21	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00940000174613	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794
Archosauria	ANCESTRAL SPECIES	3	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00960000188973	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.a.b ##21	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Aves	ANCESTRAL SPECIES	12	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00960000188973	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.a.b ##21	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Neognathae	ANCESTRAL SPECIES	2	ENSGT00390000017528	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.a.b ##21	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Galloanserae	ANCESTRAL SPECIES	2	ENSGT00390000017528	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.a.b ##21	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Anatidae	ANCESTRAL SPECIES	11	ENSGT00390000010056	ENSGT00940000159576	ENSGT00940000156376 #8	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.a.b ##21	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Pink-footed goose	MODERN SPECIES	3	ENSABRG00000016026	ENSABRG00000016021	ATF3 (ENSABRG00000016011) #8	BATF3 (ENSABRG00000016001) #10	NSL1 (ENSABRG00000015997) #11	TATDN3 (ENSABRG00000015988)	FLVCR1 (ENSABRG00000015963) #14	VASH2 (ENSABRG00000015959) #15	ANGEL2 (ENSABRG00000015955) #16	RPS6KC1 (ENSABRG00000015926) #17	PROX1 (ENSABRG00000015908) #18	SMYD2 (ENSABRG00000015892) #19	PTPN14 (ENSABRG00000015879) #20	CENPF (ENSABRG00000015855) #21	ENSABRG00000015844	KCNK2 (ENSABRG00000015838) #22	KCTD3 (ENSABRG00000015832) #23	USH2A (ENSABRG00000015743)	ESRRG (ENSABRG00000015726)	GPATCH2 (ENSABRG00000015714)	SPATA17 (ENSABRG00000015701)	RRP15 (ENSABRG00000015696)	TGFB2 (ENSABRG00000015692)	LYPLAL1 (ENSABRG00000015684)	SLC30A10 (ENSABRG00000015682)	ENSABRG00000015674	EPRS1 (ENSABRG00000015664)	BPNT1 (ENSABRG00000015658)	IARS2 (ENSABRG00000015646)	RAB3GAP2 (ENSABRG00000015637)	MARK1 (ENSABRG00000015627)
Duck	MODERN SPECIES	21	ENSAPLG00000012312	ATF3 (ENSAPLG00000012304) #8	BATF3 (ENSAPLG00000025402) #10	NSL1 (ENSAPLG00000024285) #11	TATDN3 (ENSAPLG00000011801)	FLVCR1 (ENSAPLG00000011448) #14	VASH2 (ENSAPLG00000011439) #15	ANGEL2 (ENSAPLG00000011269) #16	RPS6KC1 (ENSAPLG00000011098) #17	PROX1 (ENSAPLG00000028813) #18	SMYD2 (ENSAPLG00000010622) #19	PTPN14 (ENSAPLG00000010016) #20	CENPF (ENSAPLG00000009924) #21	ENSAPLG00000023638 ##21	ENSAPLG00000026344	KCNK2 (ENSAPLG00000009845) #22	KCTD3 (ENSAPLG00000009311) #23	USH2A (ENSAPLG00000008642)	ESRRG (ENSAPLG00000005309)	GPATCH2 (ENSAPLG00000005559)	SPATA17 (ENSAPLG00000005733)	RRP15 (ENSAPLG00000005787)	TGFB2 (ENSAPLG00000011679)	ENSAPLG00000028755	LYPLAL1 (ENSAPLG00000019149)	SLC30A10 (ENSAPLG00000022144)	EPRS1 (ENSAPLG00000003240)	BPNT1 (ENSAPLG00000003825)	IARS2 (ENSAPLG00000004136)	RAB3GAP2 (ENSAPLG00000004958)	MARK1 (ENSAPLG00000005705)
Phasianidae	ANCESTRAL SPECIES	3	ENSGT00940000163755	ENSGT00390000017528	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e	ENSGT00390000004585
Japanese quail	MODERN SPECIES	21	PACC1 (ENSCJPG00005007471)	NENF (ENSCJPG00005007470) #7	ATF3 (ENSCJPG00005007468) #8	BATF3 (ENSCJPG00005007466) #10	NSL1 (ENSCJPG00005007465) #11	TATDN3 (ENSCJPG00005007464)	FLVCR1 (ENSCJPG00005007463) #14	VASH2 (ENSCJPG00005007462) #15	ANGEL2 (ENSCJPG00005007461) #16	RPS6KC1 (ENSCJPG00005007460) #17	PROX1 (ENSCJPG00005007447) #18	SMYD2 (ENSCJPG00005007445) #19	PTPN14 (ENSCJPG00005007433) #20	CENPF (ENSCJPG00005007431) #21	ENSCJPG00005007429	KCNK2 (ENSCJPG00005007426) #22	KCTD3 (ENSCJPG00005007409) #23	USH2A (ENSCJPG00005007395)	ESRRG (ENSCJPG00005007364)	GPATCH2 (ENSCJPG00005007322)	SPATA17 (ENSCJPG00005007288)	RRP15 (ENSCJPG00005007256)	TGFB2 (ENSCJPG00005007255)	LYPLAL1 (ENSCJPG00005007209)	SLC30A10 (ENSCJPG00005007191)	EPRS1 (ENSCJPG00005007189)	BPNT1 (ENSCJPG00005007188)	IARS2 (ENSCJPG00005007186)	RAB3GAP2 (ENSCJPG00005007185)	MARK1 (ENSCJPG00005007180)	C1orf115 (ENSCJPG00005007176)
Phasianidae_b	ANCESTRAL SPECIES	2	ENSGT01030000234620.a.b.b.b	ENSGT00390000017528	ENSGT00940000163755	ENSGT00940000156376 #8	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e	ENSGT00390000004585
Chicken	MODERN SPECIES	22	PPP2R5A (ENSGALG00010019534)	NENF (ENSGALG00010019515)	TMEM206 (ENSGALG00010019403)	ATF3 (ENSGALG00010019307) #8	BATF3 (ENSGALG00010019285) #10	NSL1 (ENSGALG00010019268) #11	TATDN3 (ENSGALG00010019252)	FLVCR1 (ENSGALG00010021615) #14	VASH2 (ENSGALG00010019221) #15	ANGEL2 (ENSGALG00010019183) #16	RPS6KC1 (ENSGALG00010019130) #17	PROX1 (ENSGALG00010020704) #18	SMYD2 (ENSGALG00010020675) #19	PTPN14 (ENSGALG00010020640) #20	CENPF (ENSGALG00010019029) #21	KCNK2 (ENSGALG00010019020) #22	SHKBP1 (ENSGALG00010016422) #23	USH2A (ENSGALG00010016328)	ESRRG (ENSGALG00010016404)	GPATCH2 (ENSGALG00010016236)	SPATA17 (ENSGALG00010016215)	RRP15 (ENSGALG00010016141)	TGFB2 (ENSGALG00010019470)	LYPLAL1 (ENSGALG00010017580)	ENSGALG00010017573	SLC30A10 (ENSGALG00010017562)	EPRS (ENSGALG00010016118)	BPNT1 (ENSGALG00010016103)	IARS2 (ENSGALG00010016087)	RAB3GAP2 (ENSGALG00010016076)	MARK1 (ENSGALG00010016060)
Turkey	MODERN SPECIES	11	DTL (ENSMGAG00000009764)	PPP2R5A (ENSMGAG00000009729)	ENSMGAG00000009712	PACC1 (ENSMGAG00000009719)	ATF3 (ENSMGAG00000009708) #8	BATF3 (ENSMGAG00000020333) #10	NSL1 (ENSMGAG00000016643) #11	FLVCR1 (ENSMGAG00000009696) #14	VASH2 (ENSMGAG00000009679) #15	ANGEL2 (ENSMGAG00000009662) #16	ENSMGAG00000022837 #17	PROX1 (ENSMGAG00000009635) #18	SMYD2 (ENSMGAG00000009603) #19	PTPN14 (ENSMGAG00000009571) #20	CENPF (ENSMGAG00000009530) #21	ENSMGAG00000022333 #22	KCTD3 (ENSMGAG00000009514) #23	ENSMGAG00000019221	ESRRG (ENSMGAG00000009436)	GPATCH2 (ENSMGAG00000009428)	SPATA17 (ENSMGAG00000009410)	RRP15 (ENSMGAG00000009399)	TGFB2 (ENSMGAG00000009386)	LYPLAL1 (ENSMGAG00000009278)	SLC30A10 (ENSMGAG00000009270)	EPRS1 (ENSMGAG00000009215)	BPNT1 (ENSMGAG00000009194)	IARS2 (ENSMGAG00000009158)	RAB3GAP2 (ENSMGAG00000009099)	MARK1 (ENSMGAG00000009020)	ENSMGAG00000018792
Neognathae_b	ANCESTRAL SPECIES	1	ENSGT00390000017528	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.a.b ##21	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Neognathae_c	ANCESTRAL SPECIES	5	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b.b #21	ENSGT00730000111187.a.b ##21	ENSGT00730000111187.b.a #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00960000191956	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Golden eagle	MODERN SPECIES	4	NENF (ENSACCG00020008643) #7	PACC1 (ENSACCG00020008621)	ATF3 (ENSACCG00020008599) #8	BATF3 (ENSACCG00020015065) #10	NSL1 (ENSACCG00020015051) #11	TATDN3 (ENSACCG00020015033)	FLVCR1 (ENSACCG00020014999) #14	VASH2 (ENSACCG00020014981) #15	ANGEL2 (ENSACCG00020014925) #16	RPS6KC1 (ENSACCG00020014884) #17	PROX1 (ENSACCG00020014825) #18	SMYD2 (ENSACCG00020014807) #19	PTPN14 (ENSACCG00020014781) #20	ENSACCG00020014753 ##21	ENSACCG00020014735 #21	KCNK2 (ENSACCG00020014721) #22	KCTD3 (ENSACCG00020014697) #23	USH2A (ENSACCG00020014624)	ENSACCG00020014577	ESRRG (ENSACCG00020014557)	GPATCH2 (ENSACCG00020014537)	SPATA17 (ENSACCG00020014481)	RRP15 (ENSACCG00020014447)	TGFB2 (ENSACCG00020014434)	LYPLAL1 (ENSACCG00020014412)	ENSACCG00020014375	ENSACCG00020014366	ENSACCG00020014352	ENSACCG00020014339	EPRS1 (ENSACCG00020014259)	BPNT1 (ENSACCG00020014174)
Kakapo	MODERN SPECIES	2	PACC1 (ENSSHBG00005005980)	NENF (ENSSHBG00005005957) #7	ATF3 (ENSSHBG00005005920) #8	BATF3 (ENSSHBG00005005898) #10	ENSSHBG00005005869	TATDN3 (ENSSHBG00005005845)	FLVCR1 (ENSSHBG00005005819) #14	VASH2 (ENSSHBG00005005806) #15	ANGEL2 (ENSSHBG00005005783) #16	RPS6KC1 (ENSSHBG00005005756) #17	PROX1 (ENSSHBG00005005712) #18	SMYD2 (ENSSHBG00005005681) #19	PTPN14 (ENSSHBG00005005642) #20	ENSSHBG00005005611 #21	ENSSHBG00005005590 #21	KCNK2 (ENSSHBG00005005569) #22	COX7A2L (ENSSHBG00005005543)	KCNG3 (ENSSHBG00005000624)	MTA3 (ENSSHBG00005000620)	ENSSHBG00005020720	ZFP36L2 (ENSSHBG00005020717)	KCTD3 (ENSSHBG00005020715) #23	USH2A (ENSSHBG00005020696)	ESRRG (ENSSHBG00005020679)	GPATCH2 (ENSSHBG00005020675)	ENSSHBG00005020670	RRP15 (ENSSHBG00005020667)	TGFB2 (ENSSHBG00005020663)	LYPLAL1 (ENSSHBG00005020655)	ENSSHBG00005020650	ENSSHBG00005020647
Passeriformes	ANCESTRAL SPECIES	2	ENSGT00940000163755	ENSGT00390000017528	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000162430.d.a.a	ENSGT00960000189403	ENSGT00940000162430.d.a.b	ENSGT00940000162777.a.a.b.a.a	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815
Passeriformes_d	ANCESTRAL SPECIES	2	ENSGT00940000163755	ENSGT00390000017528	ENSGT00940000162504 #7	ENSGT00940000156376.d #8	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000162430.d.a.a	ENSGT00960000189403	ENSGT00940000162430.d.a.b	ENSGT00940000162777.a.a.b.a.a	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815
Passeriformes_g	ANCESTRAL SPECIES	1	ENSGT00940000163755	ENSGT00390000017528	ENSGT00940000162504 #7	ENSGT00940000156376.d #8	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000162430.d.a.a	ENSGT00940000162777.a.a.b.a.a.b	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910
Medium ground finch	MODERN SPECIES	2	PPP2R5A (ENSGFOG00000010353)	ENSGFOG00000010339	PACC1 (ENSGFOG00000010330)	ATF3 (ENSGFOG00000010326) #8	BATF3 (ENSGFOG00000010323) #10	NSL1 (ENSGFOG00000010313) #11	TATDN3 (ENSGFOG00000010297)	FLVCR1 (ENSGFOG00000010235) #14	VASH2 (ENSGFOG00000010213) #15	ANGEL2 (ENSGFOG00000010208) #16	RPS6KC1 (ENSGFOG00000010195) #17	PROX1 (ENSGFOG00000010181) #18	SMYD2 (ENSGFOG00000010171) #19	PTPN14 (ENSGFOG00000010150) #20	CENPF (ENSGFOG00000010125) #21	KCNK2 (ENSGFOG00000010115) #22	KCTD3 (ENSGFOG00000010102) #23	USH2A (ENSGFOG00000009976)	ESRRG (ENSGFOG00000009952)	GPATCH2 (ENSGFOG00000009945)	SPATA17 (ENSGFOG00000009932)	RRP15 (ENSGFOG00000009921)	TGFB2 (ENSGFOG00000009915)	LYPLAL1 (ENSGFOG00000009887)	ENSGFOG00000009873	ENSGFOG00000009858	SLC30A10 (ENSGFOG00000009856)	EPRS1 (ENSGFOG00000009760)	BPNT1 (ENSGFOG00000009744)	IARS2 (ENSGFOG00000009648)	RAB3GAP2 (ENSGFOG00000009624)
Passeroidea	ANCESTRAL SPECIES		ENSGT00390000017528	ENSGT00940000162504 #7	ENSGT00940000156376.d #8	ENSGT00940000156376.c #8	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000162430.d.a.a	ENSGT00940000162777.a.a.b.a.a.b	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910
Zebra finch	MODERN SPECIES	23	DTL (ENSTGUG00000003109)	PPP2R5A (ENSTGUG00000003063)	PACC1 (ENSTGUG00000003056)	NENF (ENSTGUG00000022854) #7	ATF3 (ENSTGUG00000003050) #8	NSL1 (ENSTGUG00000003044) #11	TATDN3 (ENSTGUG00000003025)	FLVCR1 (ENSTGUG00000003013) #14	VASH2 (ENSTGUG00000003006) #15	ANGEL2 (ENSTGUG00000002995) #16	RPS6KC1 (ENSTGUG00000002977) #17	PROX1 (ENSTGUG00000002974) #18	SMYD2 (ENSTGUG00000002951) #19	PTPN14 (ENSTGUG00000002916) #20	CENPF (ENSTGUG00000002912) #21	KCNK2 (ENSTGUG00000002899) #22	KCTD3 (ENSTGUG00000002895) #23	USH2A (ENSTGUG00000002871)	ESRRG (ENSTGUG00000002862)	GPATCH2 (ENSTGUG00000002852)	SPATA17 (ENSTGUG00000002843)	RRP15 (ENSTGUG00000023322)	TGFB2 (ENSTGUG00000002825)	LYPLAL1 (ENSTGUG00000002820)	ENSTGUG00000002815	ENSTGUG00000027878	SLC30A10 (ENSTGUG00000026929)	ENSTGUG00000028126	EPRS1 (ENSTGUG00000002796)	BPNT1 (ENSTGUG00000002789)	IARS2 (ENSTGUG00000002764)
Common canary	MODERN SPECIES	41	ENSSCAG00000005944	ENSSCAG00000005940 #8	ENSSCAG00000005938 #8	BATF3 (ENSSCAG00000005934) #10	NSL1 (ENSSCAG00000005931) #11	TATDN3 (ENSSCAG00000005926)	FLVCR1 (ENSSCAG00000005885) #14	VASH2 (ENSSCAG00000005868) #15	ANGEL2 (ENSSCAG00000005862) #16	RPS6KC1 (ENSSCAG00000005853) #17	PROX1 (ENSSCAG00000005837) #18	SMYD2 (ENSSCAG00000005830) #19	PTPN14 (ENSSCAG00000005823) #20	ENSSCAG00000005821	CENPF (ENSSCAG00000005817) #21	KCNK2 (ENSSCAG00000005813) #22	KCTD3 (ENSSCAG00000005803) #23	USH2A (ENSSCAG00000005780)	ESRRG (ENSSCAG00000005760)	GPATCH2 (ENSSCAG00000005750)	SPATA17 (ENSSCAG00000005721)	RRP15 (ENSSCAG00000005706)	TGFB2 (ENSSCAG00000005703)	LYPLAL1 (ENSSCAG00000005700)	ENSSCAG00000005697	ENSSCAG00000005695	SLC30A10 (ENSSCAG00000005691)	ENSSCAG00000005689	EPRS1 (ENSSCAG00000005655)	BPNT1 (ENSSCAG00000005647)	IARS2 (ENSSCAG00000005636)
Flycatcher	MODERN SPECIES	21	PPP2R5A (ENSFALG00000012423)	PACC1 (ENSFALG00000012420)	NENF (ENSFALG00000024990) #7	ATF3 (ENSFALG00000012408) #8	BATF3 (ENSFALG00000012404) #10	NSL1 (ENSFALG00000012399) #11	TATDN3 (ENSFALG00000012386)	FLVCR1 (ENSFALG00000012381) #14	VASH2 (ENSFALG00000012378) #15	ANGEL2 (ENSFALG00000012373) #16	RPS6KC1 (ENSFALG00000012366) #17	PROX1 (ENSFALG00000012357) #18	SMYD2 (ENSFALG00000012334) #19	PTPN14 (ENSFALG00000012316) #20	CENPF (ENSFALG00000012295) #21	KCNK2 (ENSFALG00000012286) #22	KCTD3 (ENSFALG00000012280) #23	USH2A (ENSFALG00000012264)	ESRRG (ENSFALG00000028650)	GPATCH2 (ENSFALG00000012223)	SPATA17 (ENSFALG00000012221)	RRP15 (ENSFALG00000012213)	TGFB2 (ENSFALG00000012209)	LYPLAL1 (ENSFALG00000012206)	ENSFALG00000012203	ENSFALG00000025614	ENSFALG00000026781	EPRS1 (ENSFALG00000012160)	BPNT1 (ENSFALG00000025132)	IARS2 (ENSFALG00000012124)	RAB3GAP2 (ENSFALG00000012112)
Great tit	MODERN SPECIES	22	PPP2R5A (ENSPMJG00000013574)	PACC1 (ENSPMJG00000013573)	NENF (ENSPMJG00000013572) #7	ATF3 (ENSPMJG00000013569) #8	BATF3 (ENSPMJG00000013565) #10	NSL1 (ENSPMJG00000013564) #11	TATDN3 (ENSPMJG00000013563)	FLVCR1 (ENSPMJG00000013562) #14	VASH2 (ENSPMJG00000013561) #15	ANGEL2 (ENSPMJG00000013560) #16	RPS6KC1 (ENSPMJG00000013553) #17	PROX1 (ENSPMJG00000013542) #18	SMYD2 (ENSPMJG00000013517) #19	PTPN14 (ENSPMJG00000013509) #20	CENPF (ENSPMJG00000013507) #21	KCNK2 (ENSPMJG00000013506) #22	KCTD3 (ENSPMJG00000013505) #23	USH2A (ENSPMJG00000013499)	ESRRG (ENSPMJG00000013493)	GPATCH2 (ENSPMJG00000013460)	SPATA17 (ENSPMJG00000013459)	RRP15 (ENSPMJG00000013443)	TGFB2 (ENSPMJG00000013438)	LYPLAL1 (ENSPMJG00000013434)	ENSPMJG00000013419	ENSPMJG00000013415	ENSPMJG00000013413	ENSPMJG00000013412	EPRS1 (ENSPMJG00000013293)	BPNT1 (ENSPMJG00000013292)	IARS2 (ENSPMJG00000013258)
African ostrich	MODERN SPECIES	401	ENSSCUG00000006808	ATF3 (ENSSCUG00000006812) #8	BATF3 (ENSSCUG00000006815) #10	NSL1 (ENSSCUG00000006816) #11	TATDN3 (ENSSCUG00000006817)	ENSSCUG00000006819	FLVCR1 (ENSSCUG00000006821) #14	VASH2 (ENSSCUG00000006823) #15	ANGEL2 (ENSSCUG00000006827) #16	RPS6KC1 (ENSSCUG00000006832) #17	PROX1 (ENSSCUG00000006855) #18	SMYD2 (ENSSCUG00000006860) #19	PTPN14 (ENSSCUG00000006871) #20	CENPF (ENSSCUG00000006877) #21	ENSSCUG00000006881	KCNK2 (ENSSCUG00000006885) #22	KCTD3 (ENSSCUG00000006892) #23	USH2A (ENSSCUG00000006901)	ESRRG (ENSSCUG00000006908)	GPATCH2 (ENSSCUG00000006916)	SPATA17 (ENSSCUG00000006922)	RRP15 (ENSSCUG00000006928)	TGFB2 (ENSSCUG00000006936)	LYPLAL1 (ENSSCUG00000006942)	ENSSCUG00000006947	ENSSCUG00000006949	EPRS1 (ENSSCUG00000006960)	BPNT1 (ENSSCUG00000006979)	IARS2 (ENSSCUG00000006984)	RAB3GAP2 (ENSSCUG00000006989)	MARK1 (ENSSCUG00000007001)
Australian saltwater crocodile	MODERN SPECIES	60	NENF (ENSCPRG00005000447) #7	ATF3 (ENSCPRG00005000494) #8	BATF3 (ENSCPRG00005000509) #10	NSL1 (ENSCPRG00005000512) #11	TATDN3 (ENSCPRG00005000521)	ENSCPRG00005000527	FLVCR1 (ENSCPRG00005000556) #14	VASH2 (ENSCPRG00005000563) #15	ANGEL2 (ENSCPRG00005000574) #16	ENSCPRG00005000581 #17	ENSCPRG00005000600 #17	PROX1 (ENSCPRG00005000635) #18	SMYD2 (ENSCPRG00005000681) #19	PTPN14 (ENSCPRG00005000689) #20	CENPF (ENSCPRG00005000744) #21	KCNK2 (ENSCPRG00005000811) #22	KCTD3 (ENSCPRG00005000843) #23	USH2A (ENSCPRG00005000968)	ESRRG (ENSCPRG00005001047)	GPATCH2 (ENSCPRG00005001126)	SPATA17 (ENSCPRG00005001133)	RRP15 (ENSCPRG00005001178)	TGFB2 (ENSCPRG00005001180)	LYPLAL1 (ENSCPRG00005001252)	SLC30A10 (ENSCPRG00005001300)	EPRS1 (ENSCPRG00005001357)	BPNT1 (ENSCPRG00005001695)	IARS2 (ENSCPRG00005001817)	RAB3GAP2 (ENSCPRG00005001992)	MARK1 (ENSCPRG00005002595)	PFN3 (ENSCPRG00005002628)
Cryptodira	ANCESTRAL SPECIES	1	ENSGT00940000156376 #8	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00720000108846.b	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.a.b ##21	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00940000174613	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Testudinoidea	ANCESTRAL SPECIES		ENSGT00390000018321.h	ENSGT00390000011270	ENSGT00940000174613	ENSGT00410000025698.a	ENSGT00940000153433.B.a.b	ENSGT00940000158456	ENSGT00940000153881.a #23	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082.gb #19	ENSGT00940000156874 #20	ENSGT00730000111187.a.b ##21	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT01030000234625.B.c #14	ENSGT00390000018676 #13	ENSGT00720000108846.b	ENSGT00720000108846.a	ENSGT00390000001374 #11	ENSGT00940000161120 #10	ENSGT00940000156376 #8	ENSGT00940000162504 #7	ENSGT00390000017528	ENSGT01030000234620.a.b.b.b	ENSGT00530000064210	ENSGT00390000011724	ENSGT00950000182836.b.a.b	ENSGT00940000156989	ENSGT01030000235236
Testudinidae	ANCESTRAL SPECIES	6	ENSGT00390000018321.h	ENSGT00390000011270	ENSGT00940000174613	ENSGT00410000025698.a	ENSGT00940000153433.B.a.b	ENSGT00940000158456	ENSGT00940000153881.a #23	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082.gb #19	ENSGT00940000156874 #20	ENSGT00730000111187.a.b ##21	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT01030000234625.B.c #14	ENSGT00960000188973	ENSGT00720000108846.b	ENSGT00720000108846.a	ENSGT00390000001374 #11	ENSGT00940000161120 #10	ENSGT00940000156376 #8	ENSGT00940000162504 #7	ENSGT00390000017528	ENSGT01030000234620.a.b.b.b	ENSGT00530000064210	ENSGT00390000011724	ENSGT00950000182836.b.a.b	ENSGT00940000156989	ENSGT01030000235236
Goode s thornscrub tortoise	MODERN SPECIES	17	RRP15 (ENSGEVG00005002868)	ENSGEVG00005002876	SPATA17 (ENSGEVG00005002887)	GPATCH2 (ENSGEVG00005002901)	ESRRG (ENSGEVG00005002932)	ENSGEVG00005002969	KCTD3 (ENSGEVG00005002993) #23	VASH2 (ENSGEVG00005003035) #15	ANGEL2 (ENSGEVG00005003057) #16	RPS6KC1 (ENSGEVG00005003072) #17	PROX1 (ENSGEVG00005003094) #18	ENSGEVG00005003108 #19	SMYD2 (ENSGEVG00005003117) #19	PTPN14 (ENSGEVG00005003136) #20	CENPF (ENSGEVG00005003163) #21	KCNK2 (ENSGEVG00005003188) #22	FLVCR1 (ENSGEVG00005003222) #14	ENSGEVG00005003271	ENSGEVG00005003282	TATDN3 (ENSGEVG00005003294)	NSL1 (ENSGEVG00005003308) #11	BATF3 (ENSGEVG00005003315) #10	ATF3 (ENSGEVG00005003323) #8	NENF (ENSGEVG00005003335) #7	PACC1 (ENSGEVG00005003344)	PPP2R5A (ENSGEVG00005003359)	DTL (ENSGEVG00005003388)	INTS7 (ENSGEVG00005003412)	LPGAT1 (ENSGEVG00005003430)	NEK2 (ENSGEVG00005003443)	ENSGEVG00005003451
Abingdon island giant tortoise	MODERN SPECIES	608																KCNK2 (ENSCABG00000009742) #22	ENSCABG00000009740
Emydidae	ANCESTRAL SPECIES	9	ENSGT00940000159171	ENSGT00940000157390	ENSGT00390000001960	ENSGT00390000018321.h	ENSGT00390000011270	ENSGT00410000025698.a	ENSGT00940000153433.B.a.b	ENSGT00940000158456	ENSGT00940000153881.a #23	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082.gb #19	ENSGT00940000156874 #20	ENSGT00940000156560 #22	ENSGT01030000234625.B.c #14	ENSGT00390000018676 #13	ENSGT00720000108846.b	ENSGT00720000108846.a	ENSGT00390000001374 #11	ENSGT00940000161120 #10	ENSGT00940000156376 #8	ENSGT00940000162504 #7	ENSGT00390000017528	ENSGT01030000234620.a.b.b.b	ENSGT00530000064210	ENSGT00390000011724	ENSGT00950000182836.b.a.b	ENSGT00940000156989	ENSGT01030000235236
painted turtle	DUPLICATION
painted turtle	MODERN SPECIES	2377	RRP15 (ENSCPBG00000012947)	ENSCPBG00000012949	SPATA17 (ENSCPBG00000012953)	GPATCH2 (ENSCPBG00000013037)	ENSCPBG00000013038	ESRRG (ENSCPBG00000013041)	ENSCPBG00000013050	ENSCPBG00000013070	KCTD3 (ENSCPBG00000013082) #23	VASH2 (ENSCPBG00000013087) #15	ANGEL2 (ENSCPBG00000013091) #16	RPS6KC1 (ENSCPBG00000013097) #17	PROX1 (ENSCPBG00000013115) #18	SMYD2 (ENSCPBG00000013122) #19	PTPN14 (ENSCPBG00000013127) #20	ENSCPBG00000013138 #22
painted turtle	MODERN SPECIES	2113																ENSCPBG00000005319 #22	ENSCPBG00000005322
Three-toed box turtle	MODERN SPECIES	55																KCNK2 (ENSTMTG00000000625) #22	FLVCR1 (ENSTMTG00000000689) #14	ENSTMTG00000000706	ENSTMTG00000000718	TATDN3 (ENSTMTG00000000733)	NSL1 (ENSTMTG00000000746) #11	BATF3 (ENSTMTG00000000752) #10	ATF3 (ENSTMTG00000000758) #8	NENF (ENSTMTG00000000774) #7	PACC1 (ENSTMTG00000000815)	PPP2R5A (ENSTMTG00000000847)	DTL (ENSTMTG00000000901)	INTS7 (ENSTMTG00000000974)	LPGAT1 (ENSTMTG00000001005)	NEK2 (ENSTMTG00000001021)	ENSTMTG00000001038
Chinese turtle	MODERN SPECIES	2207														ENSPSIG00000004612 #20	ENSPSIG00000000840	KCNK2 (ENSPSIG00000004504) #22	KCTD3 (ENSPSIG00000004254) #23	USH2A (ENSPSIG00000005976)	ESRRG (ENSPSIG00000005595)	ENSPSIG00000000830	GPATCH2 (ENSPSIG00000005373)	SPATA17 (ENSPSIG00000005123)	ENSPSIG00000000823
Lepidosauria	ANCESTRAL SPECIES		ENSGT00390000017528	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00960000188973	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00940000174613	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000179241	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910
Episquamata	ANCESTRAL SPECIES		ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00960000188973	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00390000002443	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00940000174613	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000179241	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910
Toxicofera	ANCESTRAL SPECIES		ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00960000188973	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00390000002443	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00940000174613	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000179241	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910
Elapidae	ANCESTRAL SPECIES		ENSGT00940000156376 #8	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00960000188973	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00390000002443	ENSGT00940000155656.d #17	ENSGT00940000155656.c #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00940000174613	ENSGT00390000011270	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000179241	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794
Indian cobra	MODERN SPECIES		ENSNNAG00000004411	ATF3 (ENSNNAG00000004429) #8	BATF3 (ENSNNAG00000004447) #10	NSL1 (ENSNNAG00000004462) #11	TATDN3 (ENSNNAG00000004506)	ENSNNAG00000004540	FLVCR1 (ENSNNAG00000004570) #14	VASH2 (ENSNNAG00000004597) #15	ANGEL2 (ENSNNAG00000004624) #16	KTI12 (ENSNNAG00000004647)	RPS6KC1 (ENSNNAG00000004678) #17	PROX1 (ENSNNAG00000004851) #18	SMYD2 (ENSNNAG00000004887) #19	PTPN14 (ENSNNAG00000005319) #20	ENSNNAG00000005358 #21	KCNK2 (ENSNNAG00000005417) #22	KCTD3 (ENSNNAG00000005447) #23	USH2A (ENSNNAG00000005549)	ESRRG (ENSNNAG00000006202)	GPATCH2 (ENSNNAG00000006224)	ENSNNAG00000006251	SPATA17 (ENSNNAG00000006261)	TGFB2 (ENSNNAG00000006272)	LYPLAL1 (ENSNNAG00000006296)	ENSNNAG00000006306	ENSNNAG00000006319	EPRS1 (ENSNNAG00000006657)	BPNT1 (ENSNNAG00000013914)	IARS2 (ENSNNAG00000013935)	RAB3GAP2 (ENSNNAG00000014086)	MARK1 (ENSNNAG00000016023)
Elapidae_a	ANCESTRAL SPECIES	2	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00960000188973	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT01000000221346	ENSGT00390000002443	ENSGT00940000155656.d #17	ENSGT00940000155656.c #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.a.b ##21	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00940000174613	ENSGT00390000011270	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000179241	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794
Acanthophiinae	ANCESTRAL SPECIES	3	ENSGT00720000108846.a	ENSGT00960000188973	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT01000000221346	ENSGT00390000002443	ENSGT00940000155656.d #17	ENSGT00940000155656.c #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874.s #20	ENSGT00940000156874.t #20	ENSGT00730000111187.a.b ##21	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00940000174613	ENSGT00390000011270	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000179241	ENSGT00940000159967	ENSGT00900000143215	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794
Mainland tiger snake	MODERN SPECIES	3	ENSNSUG00000012821 #14	ENSNSUG00000012819 #14	ENSNSUG00000012818 #14	VASH2 (ENSNSUG00000012817) #15	ANGEL2 (ENSNSUG00000012816) #16	KTI12 (ENSNSUG00000012815)	ENSNSUG00000012814 #17	ENSNSUG00000012792 #17	PROX1 (ENSNSUG00000012790) #18	SMYD2 (ENSNSUG00000012788) #19	ENSNSUG00000012786 #20	ENSNSUG00000012785 #20	ENSNSUG00000012784 #20	ENSNSUG00000012783 #20	CENPF (ENSNSUG00000012781) #21	KCNK2 (ENSNSUG00000012780) #22	KCTD3 (ENSNSUG00000012775) #23	USH2A (ENSNSUG00000012773)	ESRRG (ENSNSUG00000012772)	GPATCH2 (ENSNSUG00000012771)	SPATA17 (ENSNSUG00000012770)	TGFB2 (ENSNSUG00000012769)	LYPLAL1 (ENSNSUG00000012768)	ENSNSUG00000012767	SLC30A10 (ENSNSUG00000012766)	ENSNSUG00000012765	EPRS1 (ENSNSUG00000011613)	BPNT1 (ENSNSUG00000011604)	IARS2 (ENSNSUG00000011325)	RAB3GAP2 (ENSNSUG00000009988)	MARK1 (ENSNSUG00000009987)
Eastern brown snake	MODERN SPECIES	5	ENSPTXG00000013178 #12	TATDN3 (ENSPTXG00000013177)	ENSPTXG00000013176	FLVCR1 (ENSPTXG00000013174) #14	VASH2 (ENSPTXG00000013171) #15	ANGEL2 (ENSPTXG00000013167) #16	ENSPTXG00000013166	KTI12 (ENSPTXG00000013165)	RPS6KC1 (ENSPTXG00000013082) #17	PROX1 (ENSPTXG00000013080) #18	SMYD2 (ENSPTXG00000013077) #19	ENSPTXG00000013075 #20	ENSPTXG00000013073 #20	ENSPTXG00000013072 #20	ENSPTXG00000013069 ##21	KCNK2 (ENSPTXG00000013067) #22	KCTD3 (ENSPTXG00000013065) #23	USH2A (ENSPTXG00000013057)	ESRRG (ENSPTXG00000013048)	GPATCH2 (ENSPTXG00000013043)	ENSPTXG00000013040	SPATA17 (ENSPTXG00000013036)	TGFB2 (ENSPTXG00000013032)	LYPLAL1 (ENSPTXG00000013029)	ENSPTXG00000013027	ENSPTXG00000013025	ENSPTXG00000013023	EPRS1 (ENSPTXG00000013016)	BPNT1 (ENSPTXG00000013012)	IARS2 (ENSPTXG00000013009)	RAB3GAP2 (ENSPTXG00000013008)
Blue-lipped sea krait	MODERN SPECIES	1222																KCNK2 (ENSLLTG00000018250) #22
Lizard	MODERN SPECIES		ENSACAG00000037416	PACC1 (ENSACAG00000006381)	ENSACAG00000006366	ATF3 (ENSACAG00000006353) #8	BATF3 (ENSACAG00000006345) #10	NSL1 (ENSACAG00000038951) #11	TATDN3 (ENSACAG00000006315)	ENSACAG00000042552	VASH2 (ENSACAG00000006244) #15	ANGEL2 (ENSACAG00000006224) #16	RPS6KC1 (ENSACAG00000006181) #17	PROX1 (ENSACAG00000006174) #18	SMYD2 (ENSACAG00000006117) #19	PTPN14 (ENSACAG00000005904) #20	CENPF (ENSACAG00000005901) #21	KCNK2 (ENSACAG00000005812) #22	KCTD3 (ENSACAG00000017622) #23	USH2A (ENSACAG00000005658)	ESRRG (ENSACAG00000005586)	ENSACAG00000042984	GPATCH2 (ENSACAG00000014945)	ENSACAG00000045103	SPATA17 (ENSACAG00000014917)	ENSACAG00000043955	RRP15 (ENSACAG00000014906)	TGFB2 (ENSACAG00000001183)	ENSACAG00000044546	LYPLAL1 (ENSACAG00000041127)	ENSACAG00000001203	ENSACAG00000042338	ENSACAG00000037572
Laterata	ANCESTRAL SPECIES	4	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00960000188973	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00390000002443	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967	ENSGT00940000179241	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Common wall lizard	MODERN SPECIES	11	BATF3 (ENSPMRG00000004483) #10	NSL1 (ENSPMRG00000004477) #11	TATDN3 (ENSPMRG00000004468)	ENSPMRG00000004462	ENSPMRG00000004454	FLVCR1 (ENSPMRG00000004448) #14	VASH2 (ENSPMRG00000004436) #15	ANGEL2 (ENSPMRG00000004428) #16	KTI12 (ENSPMRG00000004423)	RPS6KC1 (ENSPMRG00000004404) #17	PROX1 (ENSPMRG00000004397) #18	SMYD2 (ENSPMRG00000004335) #19	PTPN14 (ENSPMRG00000004299) #20	CENPF (ENSPMRG00000004279) #21	ENSPMRG00000004258	KCNK2 (ENSPMRG00000004251) #22	KCTD3 (ENSPMRG00000004190) #23	ENSPMRG00000004169	USH2A (ENSPMRG00000004117)	ENSPMRG00000004095	ENSPMRG00000004090	ESRRG (ENSPMRG00000004060)	GPATCH2 (ENSPMRG00000004038)	SPATA17 (ENSPMRG00000004026)	ENSPMRG00000004022	RRP15 (ENSPMRG00000004017)	TGFB2 (ENSPMRG00000004011)	LYPLAL1 (ENSPMRG00000003992)	ENSPMRG00000003948	SLC30A10 (ENSPMRG00000003944)	ENSPMRG00000002972
Argentine black and white tegu	MODERN SPECIES	7	ATF3 (ENSSMRG00000018601) #8	BATF3 (ENSSMRG00000018602) #10	NSL1 (ENSSMRG00000018603) #11	TATDN3 (ENSSMRG00000018604)	ENSSMRG00000018605	FLVCR1 (ENSSMRG00000018606) #14	VASH2 (ENSSMRG00000018607) #15	ANGEL2 (ENSSMRG00000018609) #16	KTI12 (ENSSMRG00000018610)	RPS6KC1 (ENSSMRG00000018611) #17	PROX1 (ENSSMRG00000018612) #18	SMYD2 (ENSSMRG00000018613) #19	PTPN14 (ENSSMRG00000018703) #20	CENPF (ENSSMRG00000018705) #21	ENSSMRG00000018708	KCNK2 (ENSSMRG00000018709) #22	KCTD3 (ENSSMRG00000018712) #23	USH2A (ENSSMRG00000018713)	ESRRG (ENSSMRG00000018719)	GPATCH2 (ENSSMRG00000018722)	SPATA17 (ENSSMRG00000018724)	RRP15 (ENSSMRG00000018725)	TGFB2 (ENSSMRG00000018726)	LYPLAL1 (ENSSMRG00000018727)	ENSSMRG00000018728	ENSSMRG00000018729	ENSSMRG00000018730	EPRS1 (ENSSMRG00000018731)	BPNT1 (ENSSMRG00000018732)	IARS2 (ENSSMRG00000018733)	RAB3GAP2 (ENSSMRG00000018734)
tuatara	MODERN SPECIES	792												PROX1 (ENSSPUG00000010541) #18	SMYD2 (ENSSPUG00000010580) #19	PTPN14 (ENSSPUG00000010602) #20	ENSSPUG00000010632 #21	KCNK2 (ENSSPUG00000010639) #22
Anura	ANCESTRAL SPECIES	21	ENSGT00390000017528	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00720000108846.b	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.b #21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000158456	ENSGT00940000170735	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00940000159967.l	ENSGT00550000074815	ENSGT00940000157359	ENSGT00550000074910	ENSGT00390000005794	ENSGT00940000157560.e
Leishan spiny toad	MODERN SPECIES	7	ENSLLEG00000008631	ENSLLEG00000008543	FLVCR1 (ENSLLEG00000008403) #14	VASH2 (ENSLLEG00000008330) #15	ANGEL2 (ENSLLEG00000008242) #16	ENSLLEG00000008211	RPS6KC1 (ENSLLEG00000007837) #17	ENSLLEG00000007772	PROX1 (ENSLLEG00000007671) #18	ENSLLEG00000007647	SMYD2 (ENSLLEG00000007615) #19	ENSLLEG00000007591	PTPN14 (ENSLLEG00000007513) #20	ENSLLEG00000007470 #21	ENSLLEG00000007428	KCNK2 (ENSLLEG00000007336) #22	ENSLLEG00000007313	KCTD3 (ENSLLEG00000006919) #23	ENSLLEG00000006860	ENSLLEG00000006848	ESRRG (ENSLLEG00000006417)	ENSLLEG00000006319	GPATCH2 (ENSLLEG00000006257)	SPATA17 (ENSLLEG00000006091)	ENSLLEG00000006020	RRP15 (ENSLLEG00000005988)	TGFB2 (ENSLLEG00000005909)	ENSLLEG00000005872	LYPLAL1 (ENSLLEG00000005801)	ENSLLEG00000005751	ENSLLEG00000005728
Frog	MODERN SPECIES	5	atf3 (ENSXETG00000044220) #8	BATF3 (ENSXETG00000043512) #10	nsl1 (ENSXETG00000030886) #11	tatdn3 (ENSXETG00000042429)	ENSXETG00000031526	flvcr1 (ENSXETG00000014366) #14	vash2 (ENSXETG00000014363) #15	angel2 (ENSXETG00000014357) #16	rps6kc1 (ENSXETG00000014360) #17	prox1 (ENSXETG00000023176) #18	smyd2 (ENSXETG00000036934) #19	ptpn14 (ENSXETG00000023157) #20	ENSXETG00000048873	cenpf (ENSXETG00000023124) #21	ENSXETG00000036776	kcnk2 (ENSXETG00000023120) #22	ENSXETG00000042695	kctd3 (ENSXETG00000020907) #23	USH2A (ENSXETG00000020925)	ENSXETG00000044447	ENSXETG00000034424	esrrg (ENSXETG00000020932)	gpatch2 (ENSXETG00000021194)	spata17 (ENSXETG00000037992)	ENSXETG00000038118	rrp15 (ENSXETG00000048498)	tgfb2 (ENSXETG00000015347)	lyplal1 (ENSXETG00000041479)	ENSXETG00000037590	ENSXETG00000042748	slc30a10 (ENSXETG00000045268)
Coelacanth	MODERN SPECIES	682										ENSLACG00000014890	ENSLACG00000014838	PROX1 (ENSLACG00000013691) #18	SMYD2 (ENSLACG00000012213) #19	PTPN14 (ENSLACG00000011263) #20	CENPF (ENSLACG00000007875) #21	KCNK2 (ENSLACG00000001371) #22
Actinopterygii	ANCESTRAL SPECIES	68	ENSGT00940000162504 #7	ENSGT00940000156376 #8	ENSGT00940000161120 #10	ENSGT00390000001374 #11	ENSGT00720000108846.a	ENSGT00720000108846.b	ENSGT00390000018676 #13	ENSGT01030000234625.B.c #14	ENSGT00390000012703.a #15	ENSGT00940000157391 #16	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.a.b ##21	ENSGT00940000156560 #22	ENSGT00940000153881.a #23	ENSGT00940000165654	ENSGT00940000158456	ENSGT00940000153433.B.a.b	ENSGT00410000025698.a	ENSGT00390000011270
Neopterygii	ANCESTRAL SPECIES	165					ENSGT00940000166718	ENSGT00940000157133	ENSGT00390000002143.b.a	ENSGT00390000016811	ENSGT00940000164041	ENSGT00940000156557	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00730000111187.a.b ##21	ENSGT00940000156560 #22	ENSGT00940000166224	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000158680	ENSGT00390000016034	ENSGT00940000158349	ENSGT01070000253766.A.a.a.b	ENSGT00510000046470.a.b	ENSGT00530000063528.A.a	ENSGT00940000180091	ENSGT00940000163305.b	ENSGT00390000009415	ENSGT00390000000455.b	ENSGT00940000155936.b	ENSGT00390000017067
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	ANCESTRAL SPECIES	170	ENSGT00390000016811.h	ENSGT00390000002143.b.b	ENSGT00390000016811.g	ENSGT00940000164041	ENSGT00940000156557.h	ENSGT00530000063085.A.a	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000165866	ENSGT00730000111187.a.b ##21	ENSGT00940000156560.g #22	ENSGT00940000166224	ENSGT00940000158680	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00390000016034	ENSGT00940000158349	ENSGT01070000253766.A.a.a.b.a.b	ENSGT00510000046470.a.b	ENSGT00530000063528.A.a	ENSGT00940000180091	ENSGT00940000154096.b.b.a	ENSGT00390000009415	ENSGT00940000171406	ENSGT00520000055570.B.l	ENSGT00940000157219.e
Clupeocephala	ANCESTRAL SPECIES	471															ENSGT00730000111187.a.b ##21	ENSGT00940000156560.g #22	ENSGT00940000166224	ENSGT00940000158680	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00390000000455.b	ENSGT00940000155936.a.a
Otomorpha	ANCESTRAL SPECIES	560															ENSGT00730000111187.a.b ##21	ENSGT00940000156560.g #22	ENSGT00940000166224	ENSGT00940000158680	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00390000000455.b
Clupeiformes	ANCESTRAL SPECIES	330					ENSGT01030000234555.a.b.f.b	ENSGT00950000183114.a.a	ENSGT00940000166718	ENSGT00940000157133	ENSGT00390000002143.b.a	ENSGT00390000016811.g	ENSGT00940000164041.a	ENSGT00940000156557.g	ENSGT00940000154790.a.a.b.h #18	ENSGT00940000157082 #19	ENSGT00730000111187.a.b ##21	ENSGT00940000156560.g #22	ENSGT00940000166224	ENSGT00940000158680	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00390000000455.b
Denticle herring	DUPLICATION
Denticle herring	DUPLICATION
Denticle herring	MODERN SPECIES		srp14 (ENSDCDG00000000869)	xgb (ENSDCDG00000000872)	ENSDCDG00000000877	spint1a (ENSDCDG00000000881)	ppp1r14d (ENSDCDG00000000886)	zfyve19 (ENSDCDG00000000892)	ENSDCDG00000000899	ENSDCDG00000000912	PAK6 (ENSDCDG00000000916)	ENSDCDG00000000921	PLCB2 (ENSDCDG00000000945)	INAFM2 (ENSDCDG00000000980)	ENSDCDG00000000984	smyd2a (ENSDCDG00000000996) #19	ENSDCDG00000001039	KCNK2 (ENSDCDG00000001057) #22	ENSDCDG00000001068	ctsba (ENSDCDG00000001077)	XKR5 (ENSDCDG00000001083)	eva1a (ENSDCDG00000001085)	gcfc2 (ENSDCDG00000001089)	ENSDCDG00000001103	ENSDCDG00000001107	KCNK2 (ENSDCDG00000001113) #22	ctsba (ENSDCDG00000001119)	XKR5 (ENSDCDG00000001122)	ENSDCDG00000001125	GDF7 (ENSDCDG00000001128)	ldah (ENSDCDG00000001132)	ENSDCDG00000001142	ENSDCDG00000001154
Denticle herring	MODERN SPECIES	31												PLCB2 (ENSDCDG00000022386)	INAFM2 (ENSDCDG00000022376)	ENSDCDG00000022370	smyd2a (ENSDCDG00000022068) #19	KCNK2 (ENSDCDG00000021988) #22
Denticle herring	MODERN SPECIES		PAK6 (ENSDCDG00000000916)	ENSDCDG00000000921	PLCB2 (ENSDCDG00000000945)	INAFM2 (ENSDCDG00000000980)	ENSDCDG00000000984	smyd2a (ENSDCDG00000000996) #19	ENSDCDG00000001039	KCNK2 (ENSDCDG00000001057) #22	ENSDCDG00000001068	ctsba (ENSDCDG00000001077)	XKR5 (ENSDCDG00000001083)	eva1a (ENSDCDG00000001085)	gcfc2 (ENSDCDG00000001089)	ENSDCDG00000001103	ENSDCDG00000001107	KCNK2 (ENSDCDG00000001113) #22	ctsba (ENSDCDG00000001119)	XKR5 (ENSDCDG00000001122)	ENSDCDG00000001125	GDF7 (ENSDCDG00000001128)	ldah (ENSDCDG00000001132)	ENSDCDG00000001142	ENSDCDG00000001154	alkal2b (ENSDCDG00000001158)	SH3YL1 (ENSDCDG00000001161)	prox1a (ENSDCDG00000001164) #18	snx9a (ENSDCDG00000001172)	ENSDCDG00000001329	pomca (ENSDCDG00000001333)	EFR3B (ENSDCDG00000001346)	dnajc27 (ENSDCDG00000001390)
Atlantic herring	MODERN SPECIES	5	ENSCHAG00000020618	zgc:162964 (ENSCHAG00000020612)	LIN9 (ENSCHAG00000020338)	ENSCHAG00000020307	XDH (ENSCHAG00000006100)	ENSCHAG00000003752	dnajc27 (ENSCHAG00000003658)	EFR3B (ENSCHAG00000002516)	pomca (ENSCHAG00000002368)	pomca (ENSCHAG00000002347)	ENSCHAG00000023593	snx9a (ENSCHAG00000023578)	prox1a (ENSCHAG00000023560) #18	smyd2a (ENSCHAG00000023508) #19	CENPF (ENSCHAG00000023466) ##21	KCNK2 (ENSCHAG00000023446) #22	eva1a (ENSCHAG00000023442)	ENSCHAG00000023333	ldah (ENSCHAG00000023320)	APOB (ENSCHAG00000023273)	ENSCHAG00000023264	alkal2b (ENSCHAG00000023252)	SH3YL1 (ENSCHAG00000023242)	ENSCHAG00000023233	NHSL1 (ENSCHAG00000023180)	ENSCHAG00000023170	slc8a3 (ENSCHAG00000023168)	MAP3K9 (ENSCHAG00000023050)	TTC9 (ENSCHAG00000023039)	mrpl9 (ENSCHAG00000023029)	med6 (ENSCHAG00000023014)
Otophysi	ANCESTRAL SPECIES	80	ENSGT00940000162166	ENSGT00940000160412.a	ENSGT00950000182963.a.a	ENSGT00530000063651.a	ENSGT01030000234667.b.f.a	ENSGT00950000183114.a.a	ENSGT00940000166718	ENSGT00940000157133	ENSGT00390000002143.b.a	ENSGT00390000016811.g	ENSGT00940000164041.a	ENSGT00940000156557.g	ENSGT00940000154790.a.a.b.h #18	ENSGT00940000157082 #19	ENSGT00730000111187.a.b ##21	ENSGT00940000156560.g #22	ENSGT00940000166224	ENSGT00940000158680	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000154096.b.b.a	ENSGT00390000000455.b	ENSGT01090000260040.b.b.b.a.m.a.a	ENSGT00940000157612	ENSGT00940000155982.e.a	ENSGT00940000157227.h	ENSGT00940000160878.e	ENSGT00940000155495.C.a.b	ENSGT00940000153123.C	ENSGT00530000063787.B.d.b	ENSGT00390000013399	ENSGT00530000063424.a
Cyprinoidei	ANCESTRAL SPECIES	72	ENSGT00950000182843.a.a.a.a.tb	ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00530000063651.a	ENSGT01030000234667.b.f.a	ENSGT00950000183114.a.a	ENSGT00940000166718	ENSGT00940000157133	ENSGT00390000002143.b.a	ENSGT00390000016811.g	ENSGT00940000164041.a	ENSGT00940000156557.g	ENSGT00940000154790.a.a.b.h #18	ENSGT00940000157082 #19	ENSGT00730000111187.a.b.b ##21	ENSGT00940000156560.g #22	ENSGT00940000166224	ENSGT00940000158680	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00390000000455.b	ENSGT01090000260040.b.b.b.a.m.a.a	ENSGT00940000157612	ENSGT00940000155982.e.a	ENSGT01060000253490	ENSGT00940000157227.h	ENSGT00940000160878.e	ENSGT00940000155495.C.a.b	ENSGT00940000153123.C	ENSGT00530000063787.B.d.b	ENSGT00390000013399	ENSGT00530000063424.a
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	200	ENSGT00940000158622.e	ENSGT00950000182843.a.a.a.a.ub.a.a	ENSGT00950000182843.a.a.a.a.tb.b	ENSGT00500000044870.a.i	ENSGT00940000158839	ENSGT00530000063651.a.p.b	ENSGT00950000183114.a.a.h	ENSGT00940000166718.b	ENSGT00940000157133.a	ENSGT00390000002143.b.a.g.a	ENSGT00390000016811.g.c	ENSGT00940000156557.g.b	ENSGT00940000154790.a.a.b.h.a #18	ENSGT00940000157082.o #19	ENSGT00730000111187.a.b.b.a ##21	ENSGT00940000156560.g.c #22	ENSGT00940000166224.b	ENSGT00940000158680.b	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000154096.b.b.a.h.a.b	ENSGT00390000000455.b.g	ENSGT01090000260040.b.b.b.a.m.a.a.a	ENSGT00940000157612.h	ENSGT00940000155982.e.a.b	ENSGT01060000253490
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	8	pcmtl (ENSCARG00000069384)	rpusd2 (ENSCARG00000069391)	disp2 (ENSCARG00000069394)	ENSCARG00000069399	FANK1 (ENSCARG00000069407)	DHX32 (ENSCARG00000069424)	klf11b (ENSCARG00000069447)	grhl1 (ENSCARG00000069455)	ENSCARG00000069465	gcfc2 (ENSCARG00000069467)	eva1a (ENSCARG00000069488)	ENSCARG00000069489	gcfc2 (ENSCARG00000069500)	ywhaqb (ENSCARG00000069514)	grhl1 (ENSCARG00000069517)	KCNK2 (ENSCARG00000069519) #22	ENSCARG00000069523	ctsba (ENSCARG00000069527)	ARHGAP5 (ENSCARG00000069542)	nubpl (ENSCARG00000050449)	ENSCARG00000050585	pomt2 (ENSCARG00000050626)	ENSCARG00000050744	DYNLT1 (ENSCARG00000050782)	zmpste24 (ENSCARG00000050800)	ENSCARG00000051074	atp5if1b (ENSCARG00000051081)	rpl13a (ENSCARG00000051111)	commd9 (ENSCARG00000051147)	ENSCARG00000051172	itsn2b (ENSCARG00000051607)
Goldfish	MODERN SPECIES	8	snap23.2 (ENSCARG00000031642)	snap23.1 (ENSCARG00000031628)	ccdc28a (ENSCARG00000031622)	ECT2L (ENSCARG00000031614)	zgc:162964 (ENSCARG00000031594)	XDH (ENSCARG00000021943)	ENSCARG00000021659	ENSCARG00000021654	dnajc27 (ENSCARG00000021643)	EFR3B (ENSCARG00000021526)	pomca (ENSCARG00000021498)	snx9a (ENSCARG00000021439)	prox1a (ENSCARG00000021416) #18	smyd2a (ENSCARG00000021401) #19	CENPF (ENSCARG00000021252) ##21	KCNK2 (ENSCARG00000021240) #22	ENSCARG00000021238	ctsba (ENSCARG00000020956)	ENSCARG00000020915	eva1a (ENSCARG00000020908)	ENSCARG00000020893	cln8 (ENSCARG00000020886)	DLGAP2 (ENSCARG00000020869)	ENSCARG00000020858	zgc:193593 (ENSCARG00000020853)	gale (ENSCARG00000020788)	zbtb8a (ENSCARG00000020778)	hmgcl (ENSCARG00000020743)	gjb3 (ENSCARG00000020738)	gjb10 (ENSCARG00000020721)	wdr43 (ENSCARG00000020673)
Cyprininae_a	ANCESTRAL SPECIES	186	ENSGT00940000158622.e	ENSGT00950000182843.a.a.a.a.ub.a.a	ENSGT00950000182843.a.a.a.a.tb.b	ENSGT00500000044870.a.i	ENSGT00940000158839	ENSGT00530000063651.a.p.b	ENSGT00950000183114.a.a.h	ENSGT00940000166718.b	ENSGT00940000157133.a	ENSGT00390000002143.b.a.g.a	ENSGT00390000016811.g.c	ENSGT00940000156557.g.b	ENSGT00940000154790.a.a.b.h.a #18	ENSGT00940000157082.o #19	ENSGT00730000111187.a.b.b.a ##21	ENSGT00940000156560.g.c #22	ENSGT00940000166224.b	ENSGT00940000158680.b	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000154096.b.b.a.h.a.b	ENSGT00390000000455.b.g	ENSGT01090000260040.b.b.b.a.m.a.a.a	ENSGT00940000157612.h	ENSGT00940000155982.e.a.b	ENSGT01060000253490	ENSGT00940000155982.e.a.a	ENSGT00940000157227.h	ENSGT00940000160878.e.a	ENSGT00940000155495.C.a.b.i	ENSGT00940000153123.C.d
Common carp reference	MODERN SPECIES	30	snap23.2 (ENSCCRG00000047736)	snap23.1 (ENSCCRG00000066190)	ccdc28a (ENSCCRG00000047722)	ENSCCRG00000047720	zgc:162964 (ENSCCRG00000047711)	ENSCCRG00000029439	ENSCCRG00000013319	ENSCCRG00000067536	dnajc27 (ENSCCRG00000058575)	ENSCCRG00000015411	snx9a (ENSCCRG00000041673)	prox1a (ENSCCRG00000061297) #18	smyd2a (ENSCCRG00000033331) #19	CENPF (ENSCCRG00000039055) ##21	ENSCCRG00000024315	KCNK2 (ENSCCRG00000043815) #22	ENSCCRG00000064348	ENSCCRG00000024360	eva1a (ENSCCRG00000024363)	grhl1 (ENSCCRG00000004918)	gcfc2 (ENSCCRG00000037792)	ywhaqb (ENSCCRG00000027933)	klf11b (ENSCCRG00000006609)	ENSCCRG00000065724	DHX32 (ENSCCRG00000029108)	FANK1 (ENSCCRG00000029066)	ADAM12 (ENSCCRG00000028317)	ENSCCRG00000051911	ENSCCRG00000025702	INSYN2A (ENSCCRG00000082175)	ENSCCRG00000069418
Golden-line barbel	MODERN SPECIES	157	snap23.2 (ENSSGRG00000021852)	snap23.1 (ENSSGRG00000021849)	ccdc28a (ENSSGRG00000021845)	ENSSGRG00000021841	zgc:162964 (ENSSGRG00000021833)	XDH (ENSSGRG00000010165)	ENSSGRG00000009944	dnajc27 (ENSSGRG00000009943)	EFR3B (ENSSGRG00000008221)	pomca (ENSSGRG00000008174)	ENSSGRG00000008172	snx9a (ENSSGRG00000008164)	prox1a (ENSSGRG00000008163) #18	smyd2a (ENSSGRG00000008035) #19	CENPF (ENSSGRG00000008011) ##21	KCNK2 (ENSSGRG00000008010) #22	ENSSGRG00000008009	ctsba (ENSSGRG00000006701)	ENSSGRG00000006647	eva1a (ENSSGRG00000006639)	gcfc2 (ENSSGRG00000006635)	ywhaqb (ENSSGRG00000006616)	grhl1 (ENSSGRG00000006530)	klf11b (ENSSGRG00000006527)	DHX32 (ENSSGRG00000006524)	FANK1 (ENSSGRG00000006523)	ADAM12 (ENSSGRG00000006480)	traf4a (ENSSGRG00000006404)	nek8 (ENSSGRG00000006194)	rab34a (ENSSGRG00000006186)	ENSSGRG00000006185
Cyprininae	ANCESTRAL SPECIES	158	ENSGT00940000158622.f	ENSGT00950000182843.a.a.a.a.ub.a.b	ENSGT00950000182843.a.a.a.a.tb.a	ENSGT00500000044870.a.j.a.a	ENSGT00530000063651.a.p.a	ENSGT00950000183114.a.a.g	ENSGT00940000166718.a	ENSGT00940000157133.b	ENSGT00390000002143.b.a.g.b	ENSGT00390000016811.g.d	ENSGT00940000164041.a	ENSGT00940000156557.g.a	ENSGT00940000154790.a.a.b.h.b #18	ENSGT00940000157082.p #19	ENSGT00730000111187.a.b.b.b ##21	ENSGT00940000156560.g.d #22	ENSGT00940000166224.a	ENSGT00940000158680.a	ENSGT00940000154096.b.b.a.h.a.a	ENSGT00390000000455.b.h	ENSGT01090000260040.b.b.b.a.m.a.a.b	ENSGT00940000157612.g	ENSGT00940000155982.e.a.a	ENSGT00940000157227.h	ENSGT00940000160878.e.a	ENSGT00940000155495.C.a.b.i	ENSGT00940000153123.C.d	ENSGT00940000160878.e.b	ENSGT00940000155495.C.a.b.j	ENSGT00940000153123.C.c	ENSGT00530000063787.B.d.b.f
Goldfish	MODERN SPECIES	36	TMEM121 (ENSCARG00000067855)	pth2 (ENSCARG00000067850)	RIN3 (ENSCARG00000067819)	snap23.1 (ENSCARG00000067794)	ccdc28a (ENSCARG00000067784)	zgc:162964 (ENSCARG00000067770)	XDH (ENSCARG00000026293)	ENSCARG00000025049	eif2s1a (ENSCARG00000025029)	EFR3B (ENSCARG00000024897)	pomca (ENSCARG00000024875)	ENSCARG00000024866	snx9a (ENSCARG00000024699)	prox1a (ENSCARG00000024670) #18	smyd2a (ENSCARG00000024597) #19	KCNK2 (ENSCARG00000024588) #22	ENSCARG00000024579	ctsba (ENSCARG00000024534)	eva1a (ENSCARG00000024515)	ywhaqb (ENSCARG00000024494)	grhl1 (ENSCARG00000024405)	klf11b (ENSCARG00000024374)	ENSCARG00000024363	ADAM12 (ENSCARG00000022871)	ENSCARG00000022818	INSYN2A (ENSCARG00000022815)	abraxas2 (ENSCARG00000022807)	ARHGAP5 (ENSCARG00000022795)	nubpl (ENSCARG00000022718)	dtd2 (ENSCARG00000022704)	lin52 (ENSCARG00000022670)
Cyprininae_a	ANCESTRAL SPECIES	160	ENSGT00940000158622.f	ENSGT00950000182843.a.a.a.a.ub.a.b	ENSGT00950000182843.a.a.a.a.tb.a	ENSGT00500000044870.a.j.a.a	ENSGT00530000063651.a.p.a	ENSGT00950000183114.a.a.g	ENSGT00940000166718.a	ENSGT00940000157133.b	ENSGT00390000002143.b.a.g.b	ENSGT00390000016811.g.d	ENSGT00940000164041.a	ENSGT00940000156557.g.a	ENSGT00940000154790.a.a.b.h.b #18	ENSGT00940000157082.p #19	ENSGT00730000111187.a.b.b.b ##21	ENSGT00940000156560.g.d #22	ENSGT00940000166224.a	ENSGT00940000158680.a	ENSGT00940000154096.b.b.a.h.a.a	ENSGT00390000000455.b.h	ENSGT01090000260040.b.b.b.a.m.a.a.b	ENSGT00940000157612.g	ENSGT00940000160878.e.b	ENSGT00940000155495.C.a.b.j	ENSGT00940000153123.C.c	ENSGT00530000063787.B.d.b.f	ENSGT00390000013399.r	ENSGT00530000063424.a.m	ENSGT00940000154553.a.b.o	ENSGT00950000183193.B.d	ENSGT00940000153431.a.v.a
Common carp reference	MODERN SPECIES	4	snap23.2 (ENSCCRG00000066564)	snap23.1 (ENSCCRG00000047726)	ccdc28a (ENSCCRG00000046167)	zgc:162964 (ENSCCRG00000046158)	ENSCCRG00000045851	ENSCCRG00000008596	dnajc27 (ENSCCRG00000008603)	ENSCCRG00000022454	pomca (ENSCCRG00000008745)	ENSCCRG00000057267	ENSCCRG00000008753	snx9a (ENSCCRG00000008760)	prox1a (ENSCCRG00000061921) #18	smyd2a (ENSCCRG00000026022) #19	CENPF (ENSCCRG00000027044) ##21	KCNK2 (ENSCCRG00000027064) #22	ENSCCRG00000024298	ctsba (ENSCCRG00000027069)	eva1a (ENSCCRG00000027099)	gcfc2 (ENSCCRG00000031037)	grhl1 (ENSCCRG00000052831)	klf11b (ENSCCRG00000029179)	DHX32 (ENSCCRG00000020766)	ENSCCRG00000020768	ADAM12 (ENSCCRG00000020796)	ENSCCRG00000021291	INSYN2A (ENSCCRG00000034423)	ENSCCRG00000075160	eef1akmt2 (ENSCCRG00000034417)	abraxas2 (ENSCCRG00000043883)	ARHGAP5 (ENSCCRG00000076940)
Golden-line barbel	MODERN SPECIES	190	snap23.2 (ENSSGRG00000042367)	snap23.1 (ENSSGRG00000042368)	ccdc28a (ENSSGRG00000042369)	ENSSGRG00000042370	zgc:162964 (ENSSGRG00000042371)	XDH (ENSSGRG00000042373)	ENSSGRG00000042379	dnajc27 (ENSSGRG00000042406)	EFR3B (ENSSGRG00000042418)	pomca (ENSSGRG00000042419)	snx9a (ENSSGRG00000042431)	prox1a (ENSSGRG00000043063) #18	smyd2a (ENSSGRG00000043065) #19	ENSSGRG00000043085 ##21	ENSSGRG00000043086 ##21	KCNK2 (ENSSGRG00000043090) #22	ENSSGRG00000043092	ENSSGRG00000043095	eva1a (ENSSGRG00000043096)	gcfc2 (ENSSGRG00000043099)	ywhaqb (ENSSGRG00000043103)	grhl1 (ENSSGRG00000043113)	klf11b (ENSSGRG00000043202)	DHX32 (ENSSGRG00000043205)	FANK1 (ENSSGRG00000043208)	ADAM12 (ENSSGRG00000043213)	INSYN2A (ENSSGRG00000043214)	eef1akmt2 (ENSSGRG00000043215)	abraxas2 (ENSSGRG00000043218)	ARHGAP5 (ENSSGRG00000043219)	pomt2 (ENSSGRG00000043228)
Zebrafish	MODERN SPECIES	8	ENSDARG00000077618	snap23.2 (ENSDARG00000055252)	snap23.1 (ENSDARG00000012874)	ccdc28a (ENSDARG00000022983)	ECT2L (ENSDARG00000091471)	zgc:162964 (ENSDARG00000024602)	XDH (ENSDARG00000055240)	ENSDARG00000043141	dnajc27 (ENSDARG00000070916)	EFR3B (ENSDARG00000033516)	pomca (ENSDARG00000043135)	snx9a (ENSDARG00000000837)	prox1a (ENSDARG00000055158) #18	smyd2a (ENSDARG00000055151) #19	CENPF (ENSDARG00000055133) ##21	KCNK2 (ENSDARG00000055123) #22	ENSDARG00000075444	ctsba (ENSDARG00000055120)	ENSDARG00000097530	eva1a (ENSDARG00000061405)	gcfc2 (ENSDARG00000079020)	grhl1 (ENSDARG00000061391)	ywhaqb (ENSDARG00000023323)	klf11b (ENSDARG00000013794)	ENSDARG00000097372	DHX32 (ENSDARG00000079029)	ADAM12 (ENSDARG00000079068)	INSYN2A (ENSDARG00000107576)	eef1akmt2 (ENSDARG00000102144)	abraxas2 (ENSDARG00000098907)	ARHGAP5 (ENSDARG00000061294)
Euteleosteomorpha	ANCESTRAL SPECIES	357										ENSGT00940000155936.a.a.b	ENSGT00390000000455.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21
Protacanthopterygii	ANCESTRAL SPECIES	111	ENSGT00940000158221	ENSGT00940000154618	ENSGT00940000154482.b.b.b	ENSGT00940000156510.h	ENSGT00940000159392	ENSGT00940000166774	ENSGT00390000004917	ENSGT00390000002211	ENSGT00940000157960.k.a	ENSGT00940000155936.a.a.b	ENSGT00390000000455.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000155959	ENSGT00940000155517	ENSGT01100000263497.C	ENSGT00940000161329	ENSGT00990000203619.A.b.b.a.j	ENSGT00530000063927.a.a	ENSGT00990000203619.A.b.b.a.i	ENSGT00940000155208.b	ENSGT00940000155089	ENSGT00940000157418.b	ENSGT00940000156512.b.a	ENSGT00440000035378.d	ENSGT00720000108846.a	ENSGT00940000156072.a.b
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	972												ENSGT00940000154096.a.b	ENSGT01070000253766.A.a.a.b.a.a.f	ENSGT00940000158680.g	ENSGT00940000166224.c	ENSGT00940000156560.g.e #22	ENSGT00940000155959.`b.a
Salmoninae_a	ANCESTRAL SPECIES	64	ENSGT00940000155786.k.a.b.a	ENSGT00390000008624.r	ENSGT00940000158221	ENSGT00940000154618.ne.a.a	ENSGT00940000154482.b.b.b.z	ENSGT00940000159392	ENSGT00940000166774.e.b	ENSGT00390000004917	ENSGT00390000002211	ENSGT00940000157960.k.a.c	ENSGT00940000155936.a.a.b.a	ENSGT00940000154096.a.b	ENSGT01070000253766.A.a.a.b.a.a.f	ENSGT00940000158680.g	ENSGT00940000166224.c	ENSGT00940000156560.g.e #22	ENSGT00940000155959.`b.a	ENSGT00940000155517.jc.a	ENSGT01100000263497.C.j	ENSGT00990000213460	ENSGT00940000155237.ib	ENSGT00600000085656.b	ENSGT00940000157418.b.c	ENSGT00940000156512.b.a.e	ENSGT00440000035378.d.k	ENSGT00720000108846.a	ENSGT00940000164252.a.b.b	ENSGT00940000155731.b.e	ENSGT00940000156513.a.a.i	ENSGT00940000157463.a.c.a	ENSGT00390000013227.a.a
Oncorhynchus	ANCESTRAL SPECIES	6	ENSGT00940000155786.k.a.b.a	ENSGT00390000008624.r	ENSGT00940000158221.d	ENSGT00940000154618.ne.a.a	ENSGT00940000154482.b.b.b.z	ENSGT00940000159392	ENSGT00940000166774.e.b	ENSGT00390000004917	ENSGT00390000002211	ENSGT00940000157960.k.a.c	ENSGT00940000155936.a.a.b.a	ENSGT00940000154096.a.b	ENSGT01070000253766.A.a.a.b.a.a.f	ENSGT00940000158680.g	ENSGT00940000166224.c	ENSGT00940000156560.g.e #22	ENSGT00940000155959.`b.a	ENSGT00940000155517.jc.a	ENSGT01100000263497.C.i.b	ENSGT01100000263497.C.j	ENSGT00990000213460	ENSGT00600000085656.b	ENSGT00940000157418.b.c	ENSGT00940000156512.b.a.e	ENSGT00440000035378.d.k	ENSGT00720000108846.a	ENSGT00940000164252.a.b.b	ENSGT00940000155731.b.e	ENSGT00940000156513.a.a.i	ENSGT00940000157463.a.c.a	ENSGT00390000013227.a.a
Oncorhynchus_a	ANCESTRAL SPECIES	10	ENSGT00940000155786.k.a.b.a	ENSGT00390000008624.r	ENSGT00940000158221.d	ENSGT00940000154618.ne.a.a	ENSGT00940000154482.b.b.b.z	ENSGT00940000159392	ENSGT00940000166774.e.b	ENSGT00390000004917	ENSGT00390000002211	ENSGT00940000157960.k.a.c	ENSGT00940000155936.a.a.b.a	ENSGT00940000154096.a.b	ENSGT01070000253766.A.a.a.b.a.a.f.a	ENSGT00940000158680.g	ENSGT00940000166224.c	ENSGT00940000156560.g.e #22	ENSGT00940000155959.`b.a	ENSGT00940000155517.jc.a	ENSGT01100000263497.C.i.b	ENSGT00990000213460	ENSGT00600000085656.b	ENSGT00940000157418.b.c	ENSGT00940000156512.b.a.e	ENSGT00440000035378.d.k	ENSGT00720000108846.a	ENSGT00940000164252.a.b.b	ENSGT00940000155731.b.e	ENSGT00940000156513.a.a.i	ENSGT00940000157463.a.c.a	ENSGT00390000013227.a.a	ENSGT00940000161401.n.a
Coho salmon	MODERN SPECIES	27	ENSOKIG00005044679	dio2 (ENSOKIG00005044688)	STON2 (ENSOKIG00005044696)	foxn3 (ENSOKIG00005044712)	ENSOKIG00005044733	efcab11 (ENSOKIG00005044739)	ENSOKIG00005044776	kcnk13a (ENSOKIG00005045339)	itsn2b (ENSOKIG00005045374)	ENSOKIG00005045767	ENSOKIG00005045772	ENSOKIG00005045789	ENSOKIG00005045799	ctsba (ENSOKIG00005045815)	ENSOKIG00005045857	KCNK2 (ENSOKIG00005045869) #22	tmx1 (ENSOKIG00005045894)	FRMD6 (ENSOKIG00005045898)	gng2 (ENSOKIG00005045907)	ENSOKIG00005045913	ENSOKIG00005045931	txlnbb (ENSOKIG00005045937)	ENSOKIG00005045945	fuca2 (ENSOKIG00005045949)	TATDN3 (ENSOKIG00005045971)	dnajc5gb (ENSOKIG00005045976)	slc5a6b (ENSOKIG00005045992)	vsnl1b (ENSOKIG00005001727)	ENSOKIG00005001731	SCML4 (ENSOKIG00005001734)	afg1la (ENSOKIG00005001748)
Chinook salmon	MODERN SPECIES	2	SPTLC2 (ENSOTSG00005011017)	slirp (ENSOTSG00005011076)	adck1 (ENSOTSG00005011085)	nrxn3a (ENSOTSG00005011107)	mafba (ENSOTSG00005019319)	dio2 (ENSOTSG00005019320)	STON2 (ENSOTSG00005019321)	foxn3 (ENSOTSG00005019323)	efcab11 (ENSOTSG00005019324)	ENSOTSG00005019328	kcnk13a (ENSOTSG00005020261)	itsn2b (ENSOTSG00005020274)	ENSOTSG00005020289	ENSOTSG00005020291	ctsba (ENSOTSG00005020292)	KCNK2 (ENSOTSG00005020293) #22	tmx1 (ENSOTSG00005020294)	frmd6 (ENSOTSG00005020295)	gng2 (ENSOTSG00005020299)	ENSOTSG00005020300	ENSOTSG00005020302	txlnbb (ENSOTSG00005020303)	ENSOTSG00005020381	fuca2 (ENSOTSG00005020384)	TATDN3 (ENSOTSG00005020392)	dnajc5gb (ENSOTSG00005020395)	slc5a6b (ENSOTSG00005020410)	ENSOTSG00005020583	ENSOTSG00005020584	SCML4 (ENSOTSG00005020585)	afg1la (ENSOTSG00005020586)
Rainbow trout	MODERN SPECIES	10	dio2 (ENSOMYG00000022980)	ENSOMYG00000055778	ENSOMYG00000022984	ENSOMYG00000023034	foxn3 (ENSOMYG00000023068)	ENSOMYG00000060875	ENSOMYG00000069922	efcab11 (ENSOMYG00000023097)	ENSOMYG00000023413	ENSOMYG00000024967	ENSOMYG00000060532	ENSOMYG00000026212	ENSOMYG00000026267	ENSOMYG00000065947	ENSOMYG00000065549	ENSOMYG00000026413 #22	TMX1 (ENSOMYG00000026428)	ENSOMYG00000026449	ENSOMYG00000077337	gbg2 (ENSOMYG00000026471)	ENSOMYG00000026490	ENSOMYG00000026582	txlnbb (ENSOMYG00000026608)	ENSOMYG00000026653	fuca2 (ENSOMYG00000026672)	ENSOMYG00000026692	dnajc5gb (ENSOMYG00000026705)	ENSOMYG00000026904	ENSOMYG00000066408	vsnl1b (ENSOMYG00000027346)	ENSOMYG00000027356
Salmo	ANCESTRAL SPECIES	8	ENSGT00390000008624.r	ENSGT00940000158221	ENSGT00940000154618.ne.a.a	ENSGT00940000154482.b.b.b.z	ENSGT00940000159392	ENSGT00940000166774.e.a.b	ENSGT00940000166774.e.a.a	ENSGT00390000004917	ENSGT00390000002211	ENSGT00940000157960.k.a.c	ENSGT00940000155936.a.a.b.a	ENSGT00940000154096.a.b	ENSGT01070000253766.A.a.a.b.a.a.f	ENSGT00940000158680.g	ENSGT00940000166224.c	ENSGT00940000156560.g.e #22	ENSGT00940000155959.`b.a	ENSGT00940000155517.jc.a	ENSGT01100000263497.C.j	ENSGT00990000213460	ENSGT00940000155237.ib	ENSGT00600000085656.b	ENSGT00940000157418.b.c	ENSGT00940000156512.b.a.e	ENSGT00440000035378.d.k	ENSGT00720000108846.a	ENSGT00940000164252.a.b.b	ENSGT00940000155731.b.e	ENSGT00940000156513.a.a.i	ENSGT00940000157463.a.c.a	ENSGT00390000013227.a.a
Atlantic salmon	MODERN SPECIES		nrxn3a (ENSSSAG00000064816)	ENSSSAG00000097300	dio2 (ENSSSAG00000064521)	ston2 (ENSSSAG00000064510)	ENSSSAG00000121017	foxn3 (ENSSSAG00000094520)	efcab11 (ENSSSAG00000086716)	ENSSSAG00000110418	ENSSSAG00000061759	kcnk13a (ENSSSAG00000061530)	ENSSSAG00000059323	ENSSSAG00000059165	ENSSSAG00000059153	ctsba (ENSSSAG00000057365)	ENSSSAG00000108128	ENSSSAG00000057335 #22	tmx1 (ENSSSAG00000057327)	ENSSSAG00000057190	ENSSSAG00000093799	ENSSSAG00000057154	ENSSSAG00000057142	txlnbb (ENSSSAG00000056944)	ENSSSAG00000056912	fuca2 (ENSSSAG00000056880)	ENSSSAG00000056855	dnajc5gb (ENSSSAG00000056843)	ENSSSAG00000103891	ENSSSAG00000056753	ENSSSAG00000088209	ENSSSAG00000056628	ENSSSAG00000108606
River trout	MODERN SPECIES	26	adck1 (ENSSTUG00000021306)	nrxn3a (ENSSTUG00000021529)	ENSSTUG00000029977	dio2 (ENSSTUG00000029981)	ENSSTUG00000029992	STON2 (ENSSTUG00000030000)	foxn3 (ENSSTUG00000030038)	ENSSTUG00000030050	TDP1 (ENSSTUG00000030102)	kcnk13a (ENSSTUG00000030392)	itsn2b (ENSSTUG00000030433)	ENSSTUG00000031418	ENSSTUG00000031427	ctsba (ENSSTUG00000031445)	ENSSTUG00000031675	KCNK2 (ENSSTUG00000031690) #22	tmx1 (ENSSTUG00000031709)	frmd6 (ENSSTUG00000031745)	ENSSTUG00000031773	gng2 (ENSSTUG00000031780)	ENSSTUG00000031786	ENSSTUG00000031797	txlnbb (ENSSTUG00000031810)	ENSSTUG00000031823	fuca2 (ENSSTUG00000031866)	TATDN3 (ENSSTUG00000031902)	dnajc5gb (ENSSTUG00000031936)	slc5a6b (ENSSTUG00000031943)	vsnl1b (ENSSTUG00000031981)	SCML4 (ENSSTUG00000031993)	afg1la (ENSSTUG00000032037)
Huchen	MODERN SPECIES	2363												ENSHHUG00000052356	ENSHHUG00000052355	ENSHHUG00000052354	ctsba (ENSHHUG00000052332)	KCNK2 (ENSHHUG00000052331) #22	tmx1 (ENSHHUG00000052329)
Salmoninae	ANCESTRAL SPECIES	309															ENSGT00940000166224.d	ENSGT00940000156560.g.f #22	ENSGT00730000111187.a.b ##21	ENSGT00940000155959.`b.b	ENSGT00940000155517.jc.b	ENSGT01100000263497.C.i	ENSGT00940000161329	ENSGT00940000155089.o	ENSGT00940000157418.b.d	ENSGT00940000156512.b.a.f	ENSGT00940000156072.a.b	ENSGT00940000164252.a.b.a	ENSGT00940000161217	ENSGT00390000016702.d	ENSGT00940000155731.b.f	ENSGT00940000165101	ENSGT00390000000412
Salmoninae_a	ANCESTRAL SPECIES	8	ENSGT00390000004599	ENSGT00390000008624.q	ENSGT00940000163749.d	ENSGT00940000154482.b.b.b.y	ENSGT00940000156510.h	ENSGT00940000166774.f	ENSGT00970000193390.c.a.b.a.a.b.b	ENSGT00940000157960.k.a.d	ENSGT00940000155936.a.a.b.b	ENSGT00390000000455.b	ENSGT00390000017067	ENSGT00940000154096.a.a	ENSGT01070000253766.A.a.a.b.a.a.e	ENSGT00940000158680.h	ENSGT00940000166224.d	ENSGT00940000156560.g.f #22	ENSGT00730000111187.a.b ##21	ENSGT00940000155959.`b.b	ENSGT00940000155517.jc.b	ENSGT01100000263497.C.i	ENSGT00940000161329	ENSGT00940000155089.o	ENSGT00940000157418.b.d	ENSGT00940000156512.b.a.f	ENSGT00940000156072.a.b	ENSGT00940000164252.a.b.a	ENSGT00940000161217	ENSGT00390000016702.d	ENSGT00940000155731.b.f	ENSGT00940000165101	ENSGT00390000000412
Salmo	ANCESTRAL SPECIES	11	ENSGT00390000008624.q	ENSGT00940000154618.ne.a.b	ENSGT00940000154618.me	ENSGT00940000154482.b.b.b.y	ENSGT00940000156510.h	ENSGT00940000166774.f	ENSGT00970000193390.c.a.b.a.a.b.b	ENSGT00940000157960.k.a.d	ENSGT00940000155936.a.a.b.b	ENSGT00390000000455.b	ENSGT00390000017067	ENSGT00940000154096.a.a	ENSGT01070000253766.A.a.a.b.a.a.e	ENSGT00940000158680.h	ENSGT00940000166224.d	ENSGT00940000156560.g.f #22	ENSGT00730000111187.a.b ##21	ENSGT00940000155959.`b.b	ENSGT00940000155517.jc.b	ENSGT01100000263497.C.i	ENSGT00940000161329	ENSGT00940000155089.o	ENSGT00940000157418.b.d	ENSGT00940000156512.b.a.f	ENSGT00940000156072.a.b	ENSGT00940000164252.a.b.a	ENSGT00940000161217	ENSGT00390000016702.c.a	ENSGT00940000155731.b.f	ENSGT00940000165101	ENSGT00390000000412
Atlantic salmon	MODERN SPECIES	28	nrxn3a (ENSSSAG00000112883)	ENSSSAG00000102989	ENSSSAG00000092541	dio2 (ENSSSAG00000003055)	TSHR (ENSSSAG00000117601)	ENSSSAG00000083750	foxn3 (ENSSSAG00000003050)	ENSSSAG00000099584	ENSSSAG00000003044	ENSSSAG00000002623	ENSSSAG00000002522	ENSSSAG00000081972	ENSSSAG00000112948	ENSSSAG00000002454	ENSSSAG00000083117	ENSSSAG00000002424 #22	ENSSSAG00000002402 ##21	ENSSSAG00000002389	ENSSSAG00000002264	dusp23b (ENSSSAG00000073789)	slc22a3 (ENSSSAG00000073774)	ENSSSAG00000073766	ENSSSAG00000073761	ENSSSAG00000110982	dnajc5gb (ENSSSAG00000073757)	ENSSSAG00000073754	cenpo (ENSSSAG00000073749)	slc5a6b (ENSSSAG00000073743)	ENSSSAG00000073717	ENSSSAG00000106438	ENSSSAG00000073712
River trout	MODERN SPECIES	17	ENSSTUG00000022669	ENSSTUG00000022688	dio2 (ENSSTUG00000022692)	TSHR (ENSSTUG00000022701)	foxn3 (ENSSTUG00000022717)	ENSSTUG00000022731	ENSSTUG00000022804	kcnk13a (ENSSTUG00000022816)	ENSSTUG00000022835	gcfc2 (ENSSTUG00000022859)	pfn4 (ENSSTUG00000022967)	ENSSTUG00000022992	ENSSTUG00000023001	ctsba (ENSSTUG00000023014)	ENSSTUG00000023031	KCNK2 (ENSSTUG00000023036) #22	ENSSTUG00000023098 ##21	tmx1 (ENSSTUG00000023120)	frmd6 (ENSSTUG00000023132)	gng2 (ENSSTUG00000023160)	dusp23a (ENSSTUG00000023170)	slc22a3 (ENSSTUG00000023186)	txlnbb (ENSSTUG00000023227)	ENSSTUG00000023273	dnajc5gb (ENSSTUG00000023302)	TP53I3 (ENSSTUG00000023323)	cenpo (ENSSTUG00000023346)	slc5a6b (ENSSTUG00000023355)	ENSSTUG00000023387	ENSSTUG00000023407	ENSSTUG00000023437
Oncorhynchus	ANCESTRAL SPECIES	54	ENSGT00390000004599	ENSGT00390000008624.q	ENSGT00940000163749.d	ENSGT00940000154482.b.b.b.y	ENSGT00940000156510.h	ENSGT00940000166774.f	ENSGT00970000193390.c.a.b.a.a.b.b	ENSGT00940000157960.k.a.d	ENSGT00940000155936.a.a.b.b	ENSGT00390000000455.b	ENSGT00390000017067	ENSGT00940000154096.a.a	ENSGT01070000253766.A.a.a.b.a.a.e	ENSGT00940000158680.h	ENSGT00940000166224.d	ENSGT00940000156560.g.f #22	ENSGT00730000111187.a.b ##21	ENSGT00940000155959.`b.b	ENSGT00940000155517.jc.b	ENSGT01100000263497.C.i.a	ENSGT00940000161329	ENSGT00940000155089.o	ENSGT00940000157418.b.d	ENSGT00940000156512.b.a.f	ENSGT00940000156072.a.b	ENSGT00940000164252.a.b.a	ENSGT00940000161217	ENSGT00390000016702.d	ENSGT00940000155731.b.f	ENSGT00940000165101	ENSGT00940000154603.A.f.a
Rainbow trout	MODERN SPECIES	17	dio2 (ENSOMYG00000029603)	TSHR (ENSOMYG00000029592)	foxn3 (ENSOMYG00000029575)	ENSOMYG00000060393	ENSOMYG00000025825	ENSOMYG00000049671	ENSOMYG00000029502	ENSOMYG00000061057	ENSOMYG00000045727	ENSOMYG00000029551	ENSOMYG00000052306	ENSOMYG00000048140	ENSOMYG00000073402	ctsba (ENSOMYG00000045713)	ENSOMYG00000073092	ENSOMYG00000067208 #22	ENSOMYG00000045682 ##21	TMX1 (ENSOMYG00000045668)	ENSOMYG00000045659	GNG2 (ENSOMYG00000075053)	dusp23b (ENSOMYG00000045656)	ENSOMYG00000057289	ENSOMYG00000071476	ENSOMYG00000075855	ENSOMYG00000045646	ENSOMYG00000060975	ENSOMYG00000045636	dnajc5gb (ENSOMYG00000045629)	ENSOMYG00000045624	cenpo (ENSOMYG00000045611)	slc5a6b (ENSOMYG00000045615)
Oncorhynchus_a	ANCESTRAL SPECIES	60	ENSGT00390000008624.q	ENSGT00940000161131.a.a.l	ENSGT00940000163749.d	ENSGT00940000154482.b.b.b.y	ENSGT00940000156510.h	ENSGT00940000166774.f	ENSGT00970000193390.c.a.b.a.a.b.b	ENSGT00940000157960.k.a.d	ENSGT00940000155936.a.a.b.b	ENSGT00390000000455.b	ENSGT00390000017067	ENSGT00940000154096.a.a	ENSGT01070000253766.A.a.a.b.a.a.e	ENSGT00940000158680.h	ENSGT00940000166224.d	ENSGT00940000156560.g.f #22	ENSGT00730000111187.a.b ##21	ENSGT00940000155959.`b.b	ENSGT00940000155517.jc.b	ENSGT01100000263497.C.i.a	ENSGT00940000161329	ENSGT00940000155089.o	ENSGT00940000157418.b.d	ENSGT00940000156512.b.a.f	ENSGT00940000180392	ENSGT00940000156072.a.b	ENSGT00940000164252.a.b.a	ENSGT00940000161217	ENSGT00390000016702.d	ENSGT00940000155731.b.f	ENSGT00940000165101
Chinook salmon	MODERN SPECIES	32	ENSOTSG00005025783	ephx2 (ENSOTSG00005025777)	plaat1l (ENSOTSG00005025773)	ENSOTSG00005025768	ENSOTSG00005025763	sntg2 (ENSOTSG00005025756)	TPO (ENSOTSG00005025751)	ENSOTSG00005025745	ENSOTSG00005025741	ENSOTSG00005025739	ENSOTSG00005025738	ENSOTSG00005025737	SNAP25 (ENSOTSG00005025735)	EMILIN1 (ENSOTSG00005025732)	ENSOTSG00005025727	KCNK2 (ENSOTSG00005025725) #22	ENSOTSG00005025723 ##21	tmx1 (ENSOTSG00005025719)	frmd6 (ENSOTSG00005025700)	gng2 (ENSOTSG00005025698)	dusp23a (ENSOTSG00005025697)	slc22a3 (ENSOTSG00005025696)	ENSOTSG00005025693	txlnbb (ENSOTSG00005025692)	ENSOTSG00005025690	ENSOTSG00005025688	SLC30A2 (ENSOTSG00005025687)	TP53I3 (ENSOTSG00005025686)	cenpo (ENSOTSG00005025683)	slc5a6b (ENSOTSG00005025681)	ENSOTSG00005025679
Coho salmon	MODERN SPECIES	5	ENSOKIG00005009491	ENSOKIG00005009509	dio2 (ENSOKIG00005009513)	TSHR (ENSOKIG00005009530)	foxn3 (ENSOKIG00005009594)	ENSOKIG00005009601	ENSOKIG00005009609	KCNK13 (ENSOKIG00005009614)	ITSN2 (ENSOKIG00005009721)	gcfc2 (ENSOKIG00005011689)	pfn4 (ENSOKIG00005011766)	ENSOKIG00005011772	ENSOKIG00005011780	ctsba (ENSOKIG00005011804)	ENSOKIG00005011862	KCNK2 (ENSOKIG00005011869) #22	ENSOKIG00005011884 ##21	TMX1 (ENSOKIG00005011912)	frmd6 (ENSOKIG00005011936)	ENSOKIG00005011955	GNG2 (ENSOKIG00005011961)	dusp23a (ENSOKIG00005011975)	slc22a3 (ENSOKIG00005012010)	ENSOKIG00005012467	ENSOKIG00005012506	ENSOKIG00005012514	SLC30A2 (ENSOKIG00005012523)	dnajc5gb (ENSOKIG00005012544)	TP53I3 (ENSOKIG00005012550)	cenpo (ENSOKIG00005012566)	slc5a6b (ENSOKIG00005012593)
Huchen	MODERN SPECIES	3706																KCNK2 (ENSHHUG00000028119) #22
Northern pike	MODERN SPECIES	14	STON2 (ENSELUG00000017202)	foxn3 (ENSELUG00000017269)	ENSELUG00000017218	ENSELUG00000017714	ENSELUG00000017875	efcab11 (ENSELUG00000017916)	TDP1 (ENSELUG00000017964)	kcnk13a (ENSELUG00000017986)	itsn2b (ENSELUG00000018065)	gcfc2 (ENSELUG00000018138)	ENSELUG00000032868	ENSELUG00000018169	ENSELUG00000018172	ctsba (ENSELUG00000018201)	ENSELUG00000018216	KCNK2 (ENSELUG00000018257) #22	ENSELUG00000018317 ##21	tmx1 (ENSELUG00000000771)	frmd6 (ENSELUG00000018391)	ENSELUG00000018360	gng2 (ENSELUG00000033197)	ENSELUG00000018446	dusp23 (ENSELUG00000018427)	slc22a3 (ENSELUG00000018465)	txlnbb (ENSELUG00000018506)	ENSELUG00000018533	fuca2 (ENSELUG00000018560)	TATDN3 (ENSELUG00000018600)	SLC30A2 (ENSELUG00000018669)	dnajc5gb (ENSELUG00000018687)	TP53I3 (ENSELUG00000018718)
Acanthomorphata	ANCESTRAL SPECIES	18	ENSGT00390000018900	ENSGT00940000165019	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
Euacanthomorphacea	ANCESTRAL SPECIES	23	ENSGT00390000018900	ENSGT00390000001700.b	ENSGT00940000165019	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
Percomorphaceae	ANCESTRAL SPECIES	15	ENSGT00390000018900	ENSGT00390000001700.b	ENSGT00940000165019	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
Tiger tail seahorse	MODERN SPECIES	71	ENSHCOG00000018751	lpin1a (ENSHCOG00000018810)	ENSHCOG00000018830	ENSHCOG00000018840	ENSHCOG00000018845	tfb2m (ENSHCOG00000018851)	sccpdha.1 (ENSHCOG00000018891)	gcfc2 (ENSHCOG00000019255)	ENSHCOG00000019293	ENSHCOG00000019323	ENSHCOG00000019339	ENSHCOG00000019362	ctsba (ENSHCOG00000019390)	ENSHCOG00000019409	ENSHCOG00000019426	ENSHCOG00000019453 #22
Percomorphaceae_B	ANCESTRAL SPECIES	12	ENSGT00940000156766	ENSGT01030000235230	ENSGT00980000199001	ENSGT00940000155397.a.a.c.b.a	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
Ovalentaria	ANCESTRAL SPECIES	17	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT01030000235230	ENSGT00940000155397.a.a.c.b.a	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
Atherinomorphae	ANCESTRAL SPECIES	8	ENSGT00940000165019	ENSGT00940000174980	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
Cyprinodontiformes	ANCESTRAL SPECIES	9	ENSGT00940000165019	ENSGT00940000174980	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
Aplocheiloidei	ANCESTRAL SPECIES	16	ENSGT00940000156766	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799	ENSGT00390000000455.b	ENSGT00940000155936.a.a.a.a	ENSGT00940000155936.a.b	ENSGT00940000164632.b.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000160590	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
Mangrove rivulus	MODERN SPECIES	44	ENSKMAG00000019688	ENSKMAG00000019724	tfb2m (ENSKMAG00000019736)	sccpdha.1 (ENSKMAG00000019761)	gcfc2 (ENSKMAG00000019824)	ENSKMAG00000019847	ENSKMAG00000019862	ENSKMAG00000019885	ENSKMAG00000019902	ENSKMAG00000019912	ENSKMAG00000019921	ctsba (ENSKMAG00000019947)	ENSKMAG00000019981	EFCAB2 (ENSKMAG00000019990)	ENSKMAG00000020007	KCNK2 (ENSKMAG00000020019) #22	ENSKMAG00000020043 ##21	smyd2a (ENSKMAG00000020074) #19	galnt2 (ENSKMAG00000020099)	urb2 (ENSKMAG00000020129)	ABCB10 (ENSKMAG00000020156)	ACTA1 (ENSKMAG00000020199)	ccsapb (ENSKMAG00000020230)	rab4a (ENSKMAG00000020250)	phf10 (ENSKMAG00000020279)	psmb1 (ENSKMAG00000020306)	psmc3 (ENSKMAG00000020322)	tbp (ENSKMAG00000020335)	pdcd2 (ENSKMAG00000020350)	ENSKMAG00000020368	ppm1g (ENSKMAG00000020379)
Turquoise killifish	MODERN SPECIES	1616	TRAPPC2L (ENSNFUG00015005855)	PABPN1L (ENSNFUG00015005864)	ENSNFUG00015005868	ENSNFUG00015005873	ENSNFUG00015005876	ENSNFUG00015005882	ACSF3 (ENSNFUG00015005889)	ENSNFUG00015005896	TBP (ENSNFUG00015005903)	PSMC3 (ENSNFUG00015005911)	CTSBA (ENSNFUG00015005914)	ADPGK2 (ENSNFUG00015005922)	efcab2 (ENSNFUG00015005932)	ENSNFUG00015005936	CGREF1 (ENSNFUG00015005939)	KCNK2 (ENSNFUG00015005948) #22	CENPF (ENSNFUG00015005957) ##21	SMYD2A (ENSNFUG00015005985) #19	galnt2 (ENSNFUG00015006153)	URB2 (ENSNFUG00015006908)	ABCB10 (ENSNFUG00015006936)	ACTA1 (ENSNFUG00015007012)	ccsapb (ENSNFUG00015007024)	rab4a (ENSNFUG00015007036)	phf10 (ENSNFUG00015007051)	PSMB1 (ENSNFUG00015007077)	ENSNFUG00015007086	FAM176A (ENSNFUG00015007088)	GCFC2 (ENSNFUG00015007115)	sccpdha.1 (ENSNFUG00015007125)	tfb2m (ENSNFUG00015007154)
Cyprinodontoidei	ANCESTRAL SPECIES	6	ENSGT00940000165019	ENSGT00940000174980	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
NAME_4	ANCESTRAL SPECIES	53												ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
Mummichog	MODERN SPECIES	2457																KCNK2 (ENSFHEG00000010197) #22	ENSFHEG00000010221 ##21	smyd2a (ENSFHEG00000000838) #19	galnt2 (ENSFHEG00000010338)	urb2 (ENSFHEG00000010357)	ABCB10 (ENSFHEG00000010434)	ACTA1 (ENSFHEG00000010463)	ccsapb (ENSFHEG00000010470)	rab4a (ENSFHEG00000010509)	phf10 (ENSFHEG00000010563)	psmb1 (ENSFHEG00000010586)	psmc3 (ENSFHEG00000010599)	tbp (ENSFHEG00000000592)	pdcd2 (ENSFHEG00000010612)	ENSFHEG00000010629	ppm1g (ENSFHEG00000010645)
Sheepshead minnow	MODERN SPECIES	481	ENSCVAG00000010514	dld (ENSCVAG00000010557)	mis12 (ENSCVAG00000010564)	ppm1g (ENSCVAG00000010572)	ENSCVAG00000000294	pdcd2 (ENSCVAG00000010600)	tbp (ENSCVAG00000010629)	psmc3 (ENSCVAG00000010638)	psmb1 (ENSCVAG00000010663)	phf10 (ENSCVAG00000010696)	rab4a (ENSCVAG00000010727)	ctsba (ENSCVAG00000010783)	ENSCVAG00000010796	efcab2 (ENSCVAG00000010822)	ENSCVAG00000010831	KCNK2 (ENSCVAG00000010855) #22	ENSCVAG00000010864 ##21	smyd2a (ENSCVAG00000010909) #19	galnt2 (ENSCVAG00000010990)	urb2 (ENSCVAG00000011011)	ABCB10 (ENSCVAG00000011056)	ACTA1 (ENSCVAG00000011081)	ccsapb (ENSCVAG00000011087)	ENSCVAG00000011100
Poeciliinae	ANCESTRAL SPECIES	13	ENSGT00940000165019	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00390000009571.a.b.a.b.g.a.a.b.b.b	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
Poecilia	ANCESTRAL SPECIES	4	ENSGT00940000156766	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b	ENSGT00940000154096.a	ENSGT00950000183007.b.f.b.b.b	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00390000009571.a.b.a.b.g.a.a.b.b.b	ENSGT00390000009571.a.b.a.b.g.a.a.b.b.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
NAME_6	ANCESTRAL SPECIES	5												ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000175771	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
Amazon molly	MODERN SPECIES	285													ctsba (ENSPFOG00000013851)	ENSPFOG00000013944	ENSPFOG00000013967	KCNK2 (ENSPFOG00000013983) #22	ENSPFOG00000014027 ##21	smyd2a (ENSPFOG00000014139) #19	galnt2 (ENSPFOG00000014202)	urb2 (ENSPFOG00000014330)	ABCB10 (ENSPFOG00000014469)	ACTA1 (ENSPFOG00000014575)	ENSPFOG00000014611	ccsapb (ENSPFOG00000014614)	rab4a (ENSPFOG00000014630)	phf10 (ENSPFOG00000014670)	psmb1 (ENSPFOG00000014742)	psmc3 (ENSPFOG00000014767)	tbp (ENSPFOG00000014770)	pdcd2 (ENSPFOG00000014811)	ENSPFOG00000014852
Sailfin molly	MODERN SPECIES	1022																KCNK2 (ENSPLAG00000014775) #22	ENSPLAG00000014753 ##21	smyd2a (ENSPLAG00000014742) #19	galnt2 (ENSPLAG00000014717)	urb2 (ENSPLAG00000014654)	ABCB10 (ENSPLAG00000014644)	ACTA1 (ENSPLAG00000014597)	ccsapb (ENSPLAG00000014575)	rab4a (ENSPLAG00000014563)	phf10 (ENSPLAG00000014547)	psmb1 (ENSPLAG00000014528)	psmc3 (ENSPLAG00000014516)	tbp (ENSPLAG00000014504)	pdcd2 (ENSPLAG00000014493)	ENSPLAG00000014474	ppm1g (ENSPLAG00000014466)
Guppy	MODERN SPECIES	455	ENSPREG00000010738	itsn2b (ENSPREG00000010708)	ENSPREG00000010647	ENSPREG00000010632	ENSPREG00000010622	ENSPREG00000010607	ENSPREG00000010592	ENSPREG00000010580	ENSPREG00000010565	ENSPREG00000010548	ENSPREG00000010523	ctsba (ENSPREG00000010479)	ENSPREG00000010463	efcab2 (ENSPREG00000010453)	ENSPREG00000010438	ENSPREG00000010423 #22	ENSPREG00000010397 ##21	smyd2a (ENSPREG00000010363) #19	galnt2 (ENSPREG00000010296)	urb2 (ENSPREG00000010268)	ABCB10 (ENSPREG00000010230)	ENSPREG00000010191	ccsapb (ENSPREG00000010171)	rab4a (ENSPREG00000010154)	phf10 (ENSPREG00000010123)	psmb1 (ENSPREG00000010108)	psmc3 (ENSPREG00000010098)	tbp (ENSPREG00000010061)	pdcd2 (ENSPREG00000010037)	ppm1g (ENSPREG00000010024)	mis12 (ENSPREG00000010020)
Platyfish	MODERN SPECIES	18	ENSXMAG00000024979	ENSXMAG00000026642	ENSXMAG00000028738	ENSXMAG00000023367	ENSXMAG00000030087	ENSXMAG00000029715	ENSXMAG00000024631	ENSXMAG00000028972	ENSXMAG00000025985	ENSXMAG00000029489	ENSXMAG00000025005	ctsba (ENSXMAG00000015152)	ENSXMAG00000015149	efcab2 (ENSXMAG00000028544)	ENSXMAG00000015144	KCNK2 (ENSXMAG00000015131) #22	ENSXMAG00000015125 ##21	smyd2a (ENSXMAG00000028526) #19	galnt2 (ENSXMAG00000015073)	urb2 (ENSXMAG00000015059)	ABCB10 (ENSXMAG00000015039)	ACTA1 (ENSXMAG00000015025)	ccsapb (ENSXMAG00000015021)	rab4a (ENSXMAG00000026193)	phf10 (ENSXMAG00000014974)	psmb1 (ENSXMAG00000014952)	psmc3 (ENSXMAG00000014950)	tbp (ENSXMAG00000014937)	pdcd2 (ENSXMAG00000014929)	ENSXMAG00000014920	ppm1g (ENSXMAG00000014897)
Oryzias	ANCESTRAL SPECIES	13	ENSGT00390000001700.b	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000166224	ENSGT00940000154664.h.n.d	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000164361	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f
Oryzias_b	ANCESTRAL SPECIES	5	ENSGT00390000001700.b	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000166224	ENSGT00940000154664.h.n.d	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
Indian medaka	MODERN SPECIES	26	KIF26B (ENSOMEG00000010961)	ENSOMEG00000010891	ENSOMEG00000010857	tfb2m (ENSOMEG00000010814)	sccpdha.1 (ENSOMEG00000010773)	gcfc2 (ENSOMEG00000010681)	ENSOMEG00000010632	ENSOMEG00000010591	ENSOMEG00000010587	ENSOMEG00000010544	ENSOMEG00000010518	ctsba (ENSOMEG00000010474)	ENSOMEG00000010414	ENSOMEG00000010358	KLHL10 (ENSOMEG00000010293)	KCNK2 (ENSOMEG00000010267) #22	ENSOMEG00000010242 ##21	smyd2a (ENSOMEG00000010169) #19	galnt2 (ENSOMEG00000010132)	urb2 (ENSOMEG00000010076)	ABCB10 (ENSOMEG00000010041)	ENSOMEG00000009052	ccsapb (ENSOMEG00000005536)	rab4a (ENSOMEG00000005520)	phf10 (ENSOMEG00000005488)	psmb1 (ENSOMEG00000005450)	psmc3 (ENSOMEG00000005432)	tbp (ENSOMEG00000005395)	pdcd2 (ENSOMEG00000005291)	ENSOMEG00000005270	ppm1g (ENSOMEG00000000114)
Javanese ricefish	MODERN SPECIES	17	ENSOJAG00000023439	ENSOJAG00000023424	KIF26B (ENSOJAG00000023422)	SMYD3 (ENSOJAG00000023415)	ENSOJAG00000023407	tfb2m (ENSOJAG00000023405)	sccpdha.1 (ENSOJAG00000023374)	gcfc2 (ENSOJAG00000023353)	itsn2b (ENSOJAG00000023055)	ENSOJAG00000023013	ENSOJAG00000023008	ctsba (ENSOJAG00000022953)	ENSOJAG00000022939	efcab2 (ENSOJAG00000022934)	ENSOJAG00000022930	KCNK2 (ENSOJAG00000022904) #22	ENSOJAG00000022898 ##21	smyd2a (ENSOJAG00000022875) #19	galnt2 (ENSOJAG00000022667)	urb2 (ENSOJAG00000022624)	ABCB10 (ENSOJAG00000022619)	ENSOJAG00000022600	ccsapb (ENSOJAG00000022595)	rab4a (ENSOJAG00000022575)	phf10 (ENSOJAG00000022562)	psmb1 (ENSOJAG00000022544)	psmc3 (ENSOJAG00000022536)	tbp (ENSOJAG00000022509)	pdcd2 (ENSOJAG00000022503)	ENSOJAG00000022501	ppm1g (ENSOJAG00000022476)
Oryzias_a	ANCESTRAL SPECIES	6	ENSGT00940000156766	ENSGT01030000235230	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b	ENSGT00940000155936.a.a.a.a	ENSGT00940000164632.b.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000166224	ENSGT00940000154664.h.n.d	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000164361	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
Chinese medaka	MODERN SPECIES	92	ENSOSIG00000011211	KIF26B (ENSOSIG00000000091)	SMYD3 (ENSOSIG00000000137)	ENSOSIG00000000263	tfb2m (ENSOSIG00000000268)	sccpdha.1 (ENSOSIG00000000287)	gcfc2 (ENSOSIG00000000331)	itsn2b (ENSOSIG00000000432)	ENSOSIG00000006229	ENSOSIG00000006230	ctsba (ENSOSIG00000006231)	ENSOSIG00000006233	ENSOSIG00000006235	ENSOSIG00000006237	KLHL10 (ENSOSIG00000006240)	KCNK2 (ENSOSIG00000006289) #22	ENSOSIG00000006290 ##21	smyd2a (ENSOSIG00000006291) #19	galnt2 (ENSOSIG00000006308)	urb2 (ENSOSIG00000010537)	ENSOSIG00000010538	ABCB10 (ENSOSIG00000010541)	ENSOSIG00000010557	ccsapb (ENSOSIG00000010645)	rab4a (ENSOSIG00000010646)	phf10 (ENSOSIG00000010648)	psmb1 (ENSOSIG00000010706)	psmc3 (ENSOSIG00000010710)	tbp (ENSOSIG00000010720)	pdcd2 (ENSOSIG00000010726)	ENSOSIG00000010728
Japanese Medaka HdrR	MODERN SPECIES	17	ENSORLG00000025042	tfb2m (ENSORLG00000011263)	sccpdha.1 (ENSORLG00000011246)	gcfc2 (ENSORLG00000011210)	ENSORLG00000025929	ENSORLG00000030304	ENSORLG00000024227	ENSORLG00000011188	ENSORLG00000011096	ENSORLG00000011092	ctsba (ENSORLG00000011080)	ENSORLG00000011067	ENSORLG00000011061	ENSORLG00000011055	ENSORLG00000011047	ENSORLG00000011020 #22	ENSORLG00000010987 ##21	smyd2a (ENSORLG00000010975) #19	galnt2 (ENSORLG00000010960)	urb2 (ENSORLG00000010915)	ABCB10 (ENSORLG00000010893)	acta1b (ENSORLG00000010881)	ccsapb (ENSORLG00000010863)	rab4a (ENSORLG00000010850)	phf10 (ENSORLG00000010822)	psmb1 (ENSORLG00000010803)	psmc3 (ENSORLG00000010768)	tbp (ENSORLG00000010757)	pdcd2 (ENSORLG00000010717)	ENSORLG00000010688	ppm1g (ENSORLG00000010662)
Ovalentaria_B	ANCESTRAL SPECIES	10	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT01030000235230	ENSGT00940000155397.a.a.c.b.a	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
Cichlidae	ANCESTRAL SPECIES	11	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT01030000235230	ENSGT00940000155397.a.a.c.b.a	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258.f	ENSGT00390000009258.e	ENSGT00940000157680	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f
Pseudocrenilabrinae	ANCESTRAL SPECIES	13	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT01030000235230	ENSGT00940000155397.a.a.c.b.a	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258.f	ENSGT00390000009258.e	ENSGT00940000157680	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	13	ENSGT00390000001700.b	ENSGT00940000165019	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799	ENSGT00390000000455.b.k	ENSGT00940000155936.a.a.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258.f	ENSGT00940000157680	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
Haplochromini	ANCESTRAL SPECIES	11	ENSGT00390000001700.b	ENSGT00940000165019	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799	ENSGT00390000000455.b.k	ENSGT00940000155936.a.a.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258.f	ENSGT00390000009258.e	ENSGT00940000157680	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f
Burton s mouthbrooder	MODERN SPECIES	278	ENSHBUG00000019357	ENSHBUG00000019335	KIF26B (ENSHBUG00000019313)	ENSHBUG00000019231	ENSHBUG00000000900	tfb2m (ENSHBUG00000000565)	sccpdha.1 (ENSHBUG00000019110)	gcfc2 (ENSHBUG00000019070)	itsn2b (ENSHBUG00000018884)	ENSHBUG00000018790	ENSHBUG00000018784	ctsba (ENSHBUG00000018776)	ENSHBUG00000018739	efcab2 (ENSHBUG00000018735)	ENSHBUG00000018720	ENSHBUG00000018714 #22	ENSHBUG00000018682 ##21	smyd2a (ENSHBUG00000018594) #19	galnt2 (ENSHBUG00000018559)	urb2 (ENSHBUG00000018469)	ABCB10 (ENSHBUG00000018447)	ACTA1 (ENSHBUG00000018387)	ccsapb (ENSHBUG00000018372)	rab4a (ENSHBUG00000000543)	phf10 (ENSHBUG00000018322)	psmb1 (ENSHBUG00000018287)	psmc3 (ENSHBUG00000018263)	tbp (ENSHBUG00000018252)	pdcd2 (ENSHBUG00000018191)	ENSHBUG00000018173	ppm1g (ENSHBUG00000018156)
Haplochromini_A	ANCESTRAL SPECIES	10	ENSGT00390000001700.b	ENSGT00940000165019	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799	ENSGT00390000000455.b.k	ENSGT00940000155936.a.a.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258.f	ENSGT00390000009258.e	ENSGT00940000157680	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f
Haplochromini_B	ANCESTRAL SPECIES	3	ENSGT00390000001700.b	ENSGT00940000165019	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799	ENSGT00390000000455.b.k	ENSGT00940000155936.a.a.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258.f	ENSGT00390000009258.e	ENSGT00940000157680	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f
Eastern happy	MODERN SPECIES		ENSACLG00000010859	KIF26B (ENSACLG00000010707)	SMYD3 (ENSACLG00000010070)	ENSACLG00000009823	tfb2m (ENSACLG00000009801)	sccpdha.1 (ENSACLG00000009771)	gcfc2 (ENSACLG00000009688)	itsn2b (ENSACLG00000009646)	ENSACLG00000009639	ENSACLG00000009632	ctsba (ENSACLG00000009618)	ENSACLG00000009614	ENSACLG00000009599	efcab2 (ENSACLG00000009568)	ENSACLG00000009536	ENSACLG00000009525 #22	ENSACLG00000009476 ##21	smyd2a (ENSACLG00000009457) #19	galnt2 (ENSACLG00000009395)	urb2 (ENSACLG00000009254)	ENSACLG00000009252	ABCB10 (ENSACLG00000009233)	ACTA1 (ENSACLG00000009203)	ccsapb (ENSACLG00000009191)	rab4a (ENSACLG00000009163)	phf10 (ENSACLG00000009106)	psmc3 (ENSACLG00000009092)	psmb1 (ENSACLG00000009055)	tbp (ENSACLG00000009034)	pdcd2 (ENSACLG00000009018)	ENSACLG00000009012
Zebra mbuna	MODERN SPECIES	1091	KIF26B (ENSMZEG00005010419)	ENSMZEG00005010463	ENSMZEG00005010477	tfb2m (ENSMZEG00005010491)	sccpdha.1 (ENSMZEG00005010506)	gcfc2 (ENSMZEG00005010550)	itsn2b (ENSMZEG00005010681)	ENSMZEG00005010726	ENSMZEG00005010735	ENSMZEG00005010781	ENSMZEG00005010842	ctsba (ENSMZEG00005010856)	ENSMZEG00005010872	efcab2 (ENSMZEG00005010882)	ENSMZEG00005010893	ENSMZEG00005010897 #22	ENSMZEG00005010919 ##21	smyd2a (ENSMZEG00005010949) #19	galnt2 (ENSMZEG00005010990)	urb2 (ENSMZEG00005011027)	ABCB10 (ENSMZEG00005011043)	ACTA1 (ENSMZEG00005011058)	ccsapb (ENSMZEG00005011077)	rab4a (ENSMZEG00005011086)	phf10 (ENSMZEG00005011110)	psmb1 (ENSMZEG00005011140)	psmc3 (ENSMZEG00005011149)	tbp (ENSMZEG00005011155)	pdcd2 (ENSMZEG00005011164)	ENSMZEG00005011180	ppm1g (ENSMZEG00005011190)
P. nyererei	MODERN SPECIES	346	ENSPNYG00000017754	ENSPNYG00000017742	KIF26B (ENSPNYG00000017644)	SMYD3 (ENSPNYG00000017587)	ENSPNYG00000017573	tfb2m (ENSPNYG00000017560)	sccpdha.1 (ENSPNYG00000017523)	gcfc2 (ENSPNYG00000017391)	itsn2b (ENSPNYG00000017243)	ENSPNYG00000017198	ENSPNYG00000017180	ENSPNYG00000017133	ctsba (ENSPNYG00000017100)	ENSPNYG00000017083	efcab2 (ENSPNYG00000017054)	ENSPNYG00000017023 #22	ENSPNYG00000016939 ##21	smyd2a (ENSPNYG00000016893) #19	galnt2 (ENSPNYG00000016855)	urb2 (ENSPNYG00000016840)	ENSPNYG00000016832	ABCB10 (ENSPNYG00000016807)	ACTA1 (ENSPNYG00000016784)	ccsapb (ENSPNYG00000016779)	rab4a (ENSPNYG00000016761)	phf10 (ENSPNYG00000016730)	psmb1 (ENSPNYG00000016702)	psmc3 (ENSPNYG00000016691)	tbp (ENSPNYG00000016659)	pdcd2 (ENSPNYG00000016621)	ENSPNYG00000016599
Lyretail cichlid	MODERN SPECIES	290	ENSNBRG00000002754	ENSNBRG00000002792	ENSNBRG00000002818	ENSNBRG00000002840	KIF26B (ENSNBRG00000002899)	SMYD3 (ENSNBRG00000002991)	ENSNBRG00000003102	TFB2M (ENSNBRG00000003110)	sccpdha.1 (ENSNBRG00000003153)	gcfc2 (ENSNBRG00000003218)	itsn2b (ENSNBRG00000003332)	ENSNBRG00000003447	ctsba (ENSNBRG00000003455)	ENSNBRG00000003493	efcab2 (ENSNBRG00000003520)	KCNK2 (ENSNBRG00000003546) #22	ENSNBRG00000003597 ##21	smyd2a (ENSNBRG00000003789) #19	galnt2 (ENSNBRG00000003841)	urb2 (ENSNBRG00000003902)	ABCB10 (ENSNBRG00000003917)	ACTA1 (ENSNBRG00000004030)	ccsapb (ENSNBRG00000004051)	rab4a (ENSNBRG00000004077)	phf10 (ENSNBRG00000004101)	psmb1 (ENSNBRG00000004136)	psmc3 (ENSNBRG00000004143)	tbp (ENSNBRG00000004154)	pdcd2 (ENSNBRG00000004176)	ENSNBRG00000004181	ppm1g (ENSNBRG00000004191)
Nile tilapia	MODERN SPECIES		ENSONIG00000017137	KIF26B (ENSONIG00000017136)	NRBP1 (ENSONIG00000017144)	ENSONIG00000017133	ENSONIG00000017123	ENSONIG00000017121	tfb2m (ENSONIG00000017120)	sccpdha.1 (ENSONIG00000017117)	gcfc2 (ENSONIG00000017116)	itsn2b (ENSONIG00000017109)	ENSONIG00000017107	ENSONIG00000017106	ctsba (ENSONIG00000017101)	ENSONIG00000028124	efcab2 (ENSONIG00000017098)	KCNK2 (ENSONIG00000042745) #22	ENSONIG00000017088 ##21	smyd2a (ENSONIG00000017085) #19	galnt2 (ENSONIG00000017082)	ENSONIG00000034405	ABCB10 (ENSONIG00000017076)	ACTA1 (ENSONIG00000001389)	ccsapb (ENSONIG00000017071)	rab4a (ENSONIG00000017068)	phf10 (ENSONIG00000017066)	psmb1 (ENSONIG00000017065)	psmc3 (ENSONIG00000017062)	tbp (ENSONIG00000017061)	pdcd2 (ENSONIG00000017059)	ENSONIG00000017057	ENSONIG00000017054
Midas cichlid	MODERN SPECIES	313							tfb2m (ENSACIG00000008758)	sccpdha.1 (ENSACIG00000008722)	gcfc2 (ENSACIG00000008594)	itsn2b (ENSACIG00000008481)	ENSACIG00000008465	ENSACIG00000008442	ctsba (ENSACIG00000008379)	ENSACIG00000008355	ENSACIG00000008343	KCNK2 (ENSACIG00000008322) #22	ENSACIG00000008187 ##21	smyd2a (ENSACIG00000008136) #19	galnt2 (ENSACIG00000008096)	ENSACIG00000008078	ABCB10 (ENSACIG00000008013)	ACTA1 (ENSACIG00000007991)	ccsapb (ENSACIG00000007973)	rab4a (ENSACIG00000007959)	phf10 (ENSACIG00000007933)	psmb1 (ENSACIG00000007670)	psmc3 (ENSACIG00000007653)	tbp (ENSACIG00000007577)	pdcd2 (ENSACIG00000007488)	ENSACIG00000007468	ppm1g (ENSACIG00000007440)
Pomacentridae	ANCESTRAL SPECIES	49	ENSGT00940000165019	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT00390000005861.b	ENSGT00980000199001	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
Pomacentridae_A	ANCESTRAL SPECIES	47	ENSGT00390000001700.b	ENSGT00940000165019	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
Amphiprion	ANCESTRAL SPECIES	39	ENSGT00390000001700.b	ENSGT00940000165019	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000175771	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
Orange clownfish	MODERN SPECIES		ENSAPEG00000004019	ENSAPEG00000004036	KIF26B (ENSAPEG00000004089)	ENSAPEG00000004188	ENSAPEG00000004244	tfb2m (ENSAPEG00000004298)	sccpdha.1 (ENSAPEG00000004316)	gcfc2 (ENSAPEG00000004403)	itsn2b (ENSAPEG00000004493)	ENSAPEG00000004668	ENSAPEG00000004676	ctsba (ENSAPEG00000004705)	ENSAPEG00000004791	ENSAPEG00000004852	ENSAPEG00000004871	KCNK2 (ENSAPEG00000004877) #22	ENSAPEG00000004920 ##21	smyd2a (ENSAPEG00000005120) #19	galnt2 (ENSAPEG00000005162)	urb2 (ENSAPEG00000005263)	ABCB10 (ENSAPEG00000005290)	ACTA1 (ENSAPEG00000005368)	ccsapb (ENSAPEG00000005394)	rab4a (ENSAPEG00000005413)	phf10 (ENSAPEG00000005441)	psmb1 (ENSAPEG00000005490)	ENSAPEG00000005519	psmc3 (ENSAPEG00000005528)	tbp (ENSAPEG00000005538)	pdcd2 (ENSAPEG00000005581)	ENSAPEG00000005629
Clown anemonefish	MODERN SPECIES	1053													ENSAOCG00000019700	fam8a1b (ENSAOCG00000001432)	ATXN1 (ENSAOCG00000019715)	KCNK2 (ENSAOCG00000019738) #22	ENSAOCG00000001445 ##21	smyd2a (ENSAOCG00000019851) #19	galnt2 (ENSAOCG00000019935)	urb2 (ENSAOCG00000019961)	ABCB10 (ENSAOCG00000020052)	ACTA1 (ENSAOCG00000020084)	ccsapb (ENSAOCG00000020094)	rab4a (ENSAOCG00000020128)	phf10 (ENSAOCG00000020168)	psmb1 (ENSAOCG00000020197)	psmc3 (ENSAOCG00000020227)	tbp (ENSAOCG00000020274)	pdcd2 (ENSAOCG00000020305)	ENSAOCG00000020320	ppm1g (ENSAOCG00000020370)
Spiny chromis	MODERN SPECIES	160			KIF26B (ENSAPOG00000020818)	SMYD3 (ENSAPOG00000020829)	ENSAPOG00000020836	tfb2m (ENSAPOG00000020846)	sccpdha.1 (ENSAPOG00000020899)	gcfc2 (ENSAPOG00000020910)	itsn2b (ENSAPOG00000020927)	ENSAPOG00000020934	ENSAPOG00000020948	ctsba (ENSAPOG00000020999)	ENSAPOG00000000605	efcab2 (ENSAPOG00000021064)	ENSAPOG00000021074	KCNK2 (ENSAPOG00000021113) #22	ENSAPOG00000021131 ##21	smyd2a (ENSAPOG00000021187) #19	galnt2 (ENSAPOG00000021270)	urb2 (ENSAPOG00000000608)	ENSAPOG00000021304	ABCB10 (ENSAPOG00000021330)	ENSAPOG00000021346	ccsapb (ENSAPOG00000021390)	rab4a (ENSAPOG00000021436)	phf10 (ENSAPOG00000021501)	psmb1 (ENSAPOG00000021528)	psmc3 (ENSAPOG00000021543)	tbp (ENSAPOG00000021595)	pdcd2 (ENSAPOG00000021622)	ENSAPOG00000021645
Bicolor damselfish	MODERN SPECIES	703																KCNK2 (ENSSPAG00000013814) #22	ENSSPAG00000013750 ##21	smyd2a (ENSSPAG00000013714) #19	galnt2 (ENSSPAG00000013646)	urb2 (ENSSPAG00000013632)	ABCB10 (ENSSPAG00000013598)	ACTA1 (ENSSPAG00000013574)	ccsapb (ENSSPAG00000013561)	rab4a (ENSSPAG00000013536)	phf10 (ENSSPAG00000013499)	psmb1 (ENSSPAG00000013463)	ENSSPAG00000013451	psmc3 (ENSSPAG00000013441)	ENSSPAG00000013431	tbp (ENSSPAG00000013402)	pdcd2 (ENSSPAG00000013377)
Percomorphaceae_C	ANCESTRAL SPECIES	11	ENSGT01030000235230	ENSGT00980000199001	ENSGT00940000155397.a.a.c.b.a	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b	ENSGT00940000164632.b.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
Percomorphaceae_D	ANCESTRAL SPECIES	11	ENSGT00390000001700.b	ENSGT00940000165019	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
Carangaria	ANCESTRAL SPECIES	11	ENSGT00390000018900	ENSGT00390000001700.b	ENSGT00940000165019	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b.d	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
Pleuronectoidei	ANCESTRAL SPECIES	10	ENSGT00390000001700.b	ENSGT00940000165019	ENSGT00940000174980	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b.d	ENSGT00940000154096.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000164361	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035.f	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
Turbot	MODERN SPECIES	17	ENSSMAG00000005654	ENSSMAG00000005578	ENSSMAG00000005572	ENSSMAG00000005555	ENSSMAG00000005502	ENSSMAG00000005488	ENSSMAG00000005476	ENSSMAG00000005422	ENSSMAG00000005387	ENSSMAG00000005272	ENSSMAG00000005259	ENSSMAG00000005184	ENSSMAG00000005174	ENSSMAG00000005161	ENSSMAG00000005149	ENSSMAG00000005133 #22	ENSSMAG00000005089 ##21	ENSSMAG00000005063 #19	galnt2 (ENSSMAG00000005015)	ENSSMAG00000032000	ABCB10 (ENSSMAG00000004947)	ENSSMAG00000004928	ccsapb (ENSSMAG00000004916)	rab4a (ENSSMAG00000004897)	ENSSMAG00000004861	ENSSMAG00000004846	ENSSMAG00000004835	ENSSMAG00000004822	ENSSMAG00000004807	ENSSMAG00000004749	ENSSMAG00000004731
Carangaria_A	ANCESTRAL SPECIES	20	ENSGT00390000018900	ENSGT00390000001700.b	ENSGT00940000165019	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b.c.a	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E.h	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
Seriola	ANCESTRAL SPECIES	13	ENSGT00390000018900	ENSGT00390000001700.b	ENSGT00940000165019	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b.c.a	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E.h	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
Greater amberjack	MODERN SPECIES	1	ENSSDUG00000001842	ENSSDUG00000001821	KIF26B (ENSSDUG00000001765)	SMYD3 (ENSSDUG00000001750)	ENSSDUG00000001695	tfb2m (ENSSDUG00000001650)	sccpdha.1 (ENSSDUG00000001558)	gcfc2 (ENSSDUG00000001410)	itsn2b (ENSSDUG00000001271)	ENSSDUG00000001248	ENSSDUG00000001185	ctsba (ENSSDUG00000001149)	ENSSDUG00000001116	efcab2 (ENSSDUG00000001107)	ENSSDUG00000001093	KCNK2 (ENSSDUG00000001061) #22	ENSSDUG00000001032 ##21	smyd2a (ENSSDUG00000000970) #19	galnt2 (ENSSDUG00000000918)	urb2 (ENSSDUG00000000902)	ABCB10 (ENSSDUG00000000829)	ENSSDUG00000000782	ccsapb (ENSSDUG00000000772)	rab4a (ENSSDUG00000000732)	phf10 (ENSSDUG00000000654)	psmb1 (ENSSDUG00000000621)	psmc3 (ENSSDUG00000000603)	tbp (ENSSDUG00000000570)	pdcd2 (ENSSDUG00000000477)	ENSSDUG00000000461	ppm1g (ENSSDUG00000000400)
Yellowtail amberjack	MODERN SPECIES	3090	ENSSLDG00000024594	ENSSLDG00000024580	ENSSLDG00000024569	KIF26B (ENSSLDG00000024557)	SMYD3 (ENSSLDG00000024548)	ENSSLDG00000024518	tfb2m (ENSSLDG00000024489)	sccpdha.1 (ENSSLDG00000024472)	gcfc2 (ENSSLDG00000024457)	itsn2b (ENSSLDG00000024386)	ENSSLDG00000024365	ENSSLDG00000024338	ctsba (ENSSLDG00000024319)	ENSSLDG00000024306	efcab2 (ENSSLDG00000024293)	KCNK2 (ENSSLDG00000024285) #22	ENSSLDG00000024261 ##21	smyd2a (ENSSLDG00000024245) #19	galnt2 (ENSSLDG00000024214)	urb2 (ENSSLDG00000024204)	ABCB10 (ENSSLDG00000024170)	ACTA1 (ENSSLDG00000024160)	ccsapb (ENSSLDG00000024156)	rab4a (ENSSLDG00000024133)	phf10 (ENSSLDG00000024107)	psmb1 (ENSSLDG00000024100)	psmc3 (ENSSLDG00000024093)	tbp (ENSSLDG00000024074)	pdcd2 (ENSSLDG00000024016)	ENSSLDG00000024002	ppm1g (ENSSLDG00000023990)
Barramundi perch	MODERN SPECIES	98	mpc1 (ENSLCAG00010026698)	kifbp (ENSLCAG00010026693)	ENSLCAG00010026685	vps26a (ENSLCAG00010026682)	ENSLCAG00010026678	tfb2m (ENSLCAG00010026676)	sccpdha.1 (ENSLCAG00010026652)	gcfc2 (ENSLCAG00010026634)	itsn2b (ENSLCAG00010026626)	ENSLCAG00010026622	ENSLCAG00010026621	ctsba (ENSLCAG00010026611)	ENSLCAG00010026607	ENSLCAG00010026606	ENSLCAG00010026604	KCNK2 (ENSLCAG00010026599) #22	ENSLCAG00010026590 ##21	smyd2a (ENSLCAG00010026576) #19	galnt2 (ENSLCAG00010026483)	urb2 (ENSLCAG00010026443)	ABCB10 (ENSLCAG00010026435)	ACTA1 (ENSLCAG00010026395)	ccsapb (ENSLCAG00010026388)	rab4a (ENSLCAG00010026387)	phf10 (ENSLCAG00010026383)	psmb1 (ENSLCAG00010026374)	psmc3 (ENSLCAG00010026368)	tbp (ENSLCAG00010026364)	pdcd2 (ENSLCAG00010026362)	ENSLCAG00010026359	ppm1g (ENSLCAG00010026355)
Anabantaria	ANCESTRAL SPECIES	11	ENSGT00390000001700.b	ENSGT00940000165019	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000164361	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f
Zig-zag eel	MODERN SPECIES	17	ENSMAMG00000020561	KIF26B (ENSMAMG00000020551)	ENSMAMG00000020540	smyd3 (ENSMAMG00000020536)	ENSMAMG00000027392	TFB2M (ENSMAMG00000028735)	SCCPDH (ENSMAMG00000020514)	ENSMAMG00000020508	ENSMAMG00000020445	ENSMAMG00000020438	ENSMAMG00000020433	ENSMAMG00000020427	ENSMAMG00000020419	ENSMAMG00000027931	ENSMAMG00000020413	ENSMAMG00000020407 #22	ENSMAMG00000027338 ##21	ENSMAMG00000020389 #19	galnt2 (ENSMAMG00000020369)	urb2 (ENSMAMG00000020365)	ABCB10 (ENSMAMG00000020353)	ACTA1 (ENSMAMG00000020342)	ccsapb (ENSMAMG00000020337)	rab4a (ENSMAMG00000020326)	ENSMAMG00000020306	ENSMAMG00000020299	ENSMAMG00000020296	ENSMAMG00000020292	ENSMAMG00000020288	ENSMAMG00000025876	kifbp (ENSMAMG00000020282)
Anabantoidei	ANCESTRAL SPECIES	8	ENSGT00390000018900	ENSGT00390000001700.b	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00550000075035	ENSGT00940000155172	ENSGT00940000157464	ENSGT00390000003512.q	ENSGT00940000164361	ENSGT00940000157680	ENSGT00390000009258	ENSGT00940000156958	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
Climbing perch	MODERN SPECIES	16	KIF26B (ENSATEG00000020196)	ENSATEG00000020292	ENSATEG00000020304	ENSATEG00000020321	TFB2M (ENSATEG00000020372)	ENSATEG00000020388	ENSATEG00000020421	ENSATEG00000020456	ENSATEG00000026534	ENSATEG00000020483	ENSATEG00000020497	ENSATEG00000020535	ENSATEG00000025506	ENSATEG00000026540	ENSATEG00000020607	ENSATEG00000020667 #22	ENSATEG00000020706 ##21	ENSATEG00000020732 #19	ENSATEG00000020768	ENSATEG00000020778	rab4a (ENSATEG00000020805)	ccsapb (ENSATEG00000020823)	ENSATEG00000020840	ABCB10 (ENSATEG00000020896)	ABCB10 (ENSATEG00000020861)	urb2 (ENSATEG00000020930)	galnt2 (ENSATEG00000020955)	ENSATEG00000021000	ENSATEG00000021026	ENSATEG00000021033	ENSATEG00000021049
Siamese fighting fish	MODERN SPECIES	14	ENSBSLG00000008784	ENSBSLG00000008898	KIF26B (ENSBSLG00000008959)	ENSBSLG00000009062	ENSBSLG00000009155	tfb2m (ENSBSLG00000009185)	sccpdha.1 (ENSBSLG00000009229)	gcfc2 (ENSBSLG00000009570)	itsn2b (ENSBSLG00000009797)	ENSBSLG00000010487	ENSBSLG00000010492	ctsba (ENSBSLG00000010508)	ENSBSLG00000010528	efcab2 (ENSBSLG00000010532)	ENSBSLG00000010540	KCNK2 (ENSBSLG00000010665) #22	ENSBSLG00000010868 ##21	smyd2a (ENSBSLG00000011047) #19	psmb1 (ENSBSLG00000011153)	phf10 (ENSBSLG00000011191)	rab4a (ENSBSLG00000011652)	ccsapb (ENSBSLG00000011753)	ENSBSLG00000011788	ABCB10 (ENSBSLG00000011980)	urb2 (ENSBSLG00000012518)	galnt2 (ENSBSLG00000013460)	ENSBSLG00000015019	psmc3 (ENSBSLG00000015022)	tbp (ENSBSLG00000015037)	pdcd2 (ENSBSLG00000015045)	ENSBSLG00000015050
Eupercaria	ANCESTRAL SPECIES	14	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT00940000155397.a.a.c.b.a	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000160590	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
Eupecaria_A	ANCESTRAL SPECIES	15	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT00940000155397.a.a.c.b.a	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000160590	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000164361	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f
Ballan wrasse	MODERN SPECIES		ENSLBEG00000004112	ENSLBEG00000004073	KIF26B (ENSLBEG00000003990)	SMYD3 (ENSLBEG00000003923)	ENSLBEG00000003887	tfb2m (ENSLBEG00000003846)	sccpdha.1 (ENSLBEG00000003776)	gcfc2 (ENSLBEG00000003721)	ENSLBEG00000003699	ENSLBEG00000003629	ENSLBEG00000003604	ENSLBEG00000003580	ctsba (ENSLBEG00000003527)	ENSLBEG00000003501	efcab2 (ENSLBEG00000003485)	KCNK2 (ENSLBEG00000003439) #22	ENSLBEG00000003424 ##21	smyd2a (ENSLBEG00000003371) #19	galnt2 (ENSLBEG00000003319)	ENSLBEG00000003249	ABCB10 (ENSLBEG00000003198)	ENSLBEG00000003161	ccsapb (ENSLBEG00000003142)	rab4a (ENSLBEG00000003101)	phf10 (ENSLBEG00000003061)	psmb1 (ENSLBEG00000003033)	psmc3 (ENSLBEG00000003008)	tbp (ENSLBEG00000002992)	pdcd2 (ENSLBEG00000002972)	ENSLBEG00000002953	irf8 (ENSLBEG00000002942)
Eupecaria_B	ANCESTRAL SPECIES	15	ENSGT00940000165019	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT00940000155397.a.a.c.b.a	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000160590	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
Perciformes	ANCESTRAL SPECIES	15	ENSGT00390000001700.b	ENSGT00940000165019	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT00940000155397.a.a.c.b.a	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000164361	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
Perciformes_a	ANCESTRAL SPECIES	13	ENSGT00940000155397.a.a.c.b.a	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00940000156992.e	ENSGT00390000005861.a	ENSGT00390000004799	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000160590	ENSGT00940000175771	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000164361	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
Channel bull blenny	MODERN SPECIES	17	dld (ENSCGOG00000016988)	mis12 (ENSCGOG00000017122)	ppm1g (ENSCGOG00000017129)	ENSCGOG00000017572	pdcd2 (ENSCGOG00000017576)	ENSCGOG00000017579	tfb2m (ENSCGOG00000017587)	sccpdha.1 (ENSCGOG00000017601)	gcfc2 (ENSCGOG00000017825)	itsn2b (ENSCGOG00000017869)	ENSCGOG00000018840	ENSCGOG00000018841	ctsba (ENSCGOG00000018846)	ENSCGOG00000019124	ENSCGOG00000019127	KCNK2 (ENSCGOG00000019130) #22	ENSCGOG00000019146 ##21	smyd2a (ENSCGOG00000019150) #19	galnt2 (ENSCGOG00000019217)	ENSCGOG00000019678	ABCB10 (ENSCGOG00000019682)	ENSCGOG00000019768	ccsapb (ENSCGOG00000020386)	rab4a (ENSCGOG00000020394)	phf10 (ENSCGOG00000020538)	psmb1 (ENSCGOG00000020593)	psmc3 (ENSCGOG00000020650)	tbp (ENSCGOG00000020660)	ENSCGOG00000020695	KIF26B (ENSCGOG00000020697)	ENSCGOG00000020704
Pike perch	MODERN SPECIES	29	ENSSLUG00000009094	KIF26B (ENSSLUG00000009069)	ENSSLUG00000009037	ENSSLUG00000009021	ENSSLUG00000009013	tfb2m (ENSSLUG00000009009)	sccpdha.1 (ENSSLUG00000008931)	gcfc2 (ENSSLUG00000008898)	itsn2b (ENSSLUG00000007655)	ENSSLUG00000007563	ctsba (ENSSLUG00000007456)	ENSSLUG00000007444	ENSSLUG00000007436	ENSSLUG00000007430	ENSSLUG00000007425	KCNK2 (ENSSLUG00000007410) #22	ENSSLUG00000007327 ##21	smyd2a (ENSSLUG00000007281) #19	galnt2 (ENSSLUG00000006550)	urb2 (ENSSLUG00000006513)	ABCB10 (ENSSLUG00000006505)	ENSSLUG00000006487	ccsapb (ENSSLUG00000006478)	rab4a (ENSSLUG00000006422)	phf10 (ENSSLUG00000006327)	psmb1 (ENSSLUG00000006310)	psmc3 (ENSSLUG00000006295)	tbp (ENSSLUG00000006261)	pdcd2 (ENSSLUG00000006251)	ENSSLUG00000006241	ppm1g (ENSSLUG00000006151)
Cottioidei	ANCESTRAL SPECIES	13	ENSGT00390000018900	ENSGT00390000001700.b	ENSGT00940000165019	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000164361	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
Lumpfish	MODERN SPECIES	18	ENSCLMG00005003145	ENSCLMG00005003114	ENSCLMG00005003093	ENSCLMG00005003090	ENSCLMG00005002840	ENSCLMG00005017845	tfb2m (ENSCLMG00005017844)	sccpdha.1 (ENSCLMG00005017560)	gcfc2 (ENSCLMG00005017554)	itsn2b (ENSCLMG00005015525)	ENSCLMG00005015508	ENSCLMG00005015506	ctsba (ENSCLMG00005015365)	ENSCLMG00005015364	ENSCLMG00005015363	KCNK2 (ENSCLMG00005015358) #22	ENSCLMG00005015356 ##21	smyd2a (ENSCLMG00005015336) #19	galnt2 (ENSCLMG00005015323)	urb2 (ENSCLMG00005015320)	ABCB10 (ENSCLMG00005015286)	ENSCLMG00005015273	ccsapb (ENSCLMG00005015270)	rab4a (ENSCLMG00005015268)	phf10 (ENSCLMG00005015245)	psmb1 (ENSCLMG00005015241)	psmc3 (ENSCLMG00005015235)	tbp (ENSCLMG00005015219)	pdcd2 (ENSCLMG00005015218)	ppm1g (ENSCLMG00005015192)	ENSCLMG00005015189
Stickleback	MODERN SPECIES	1	ENSGACG00000016247	ENSGACG00000016246	AHCTF1 (ENSGACG00000016245)	ENSGACG00000016243	KIF26B (ENSGACG00000016241)	SMYD3 (ENSGACG00000016239)	ENSGACG00000016238	tfb2m (ENSGACG00000016236)	sccpdha.1 (ENSGACG00000016226)	gcfc2 (ENSGACG00000016221)	itsn2b (ENSGACG00000016215)	ENSGACG00000016214	ctsba (ENSGACG00000016202)	ENSGACG00000016199	ENSGACG00000016198	KCNK2 (ENSGACG00000016197) #22	ENSGACG00000016190 ##21	smyd2a (ENSGACG00000016185) #19	galnt2 (ENSGACG00000016182)	urb2 (ENSGACG00000016179)	ABCB10 (ENSGACG00000016176)	ENSGACG00000016174	ENSGACG00000016168	ccsapb (ENSGACG00000016166)	rab4a (ENSGACG00000016164)	phf10 (ENSGACG00000016158)	psmb1 (ENSGACG00000016151)	psmc3 (ENSGACG00000016150)	tbp (ENSGACG00000016147)	pdcd2 (ENSGACG00000016144)	ENSGACG00000016143
Eupecaria_C	ANCESTRAL SPECIES	11	ENSGT00940000156491.b	ENSGT00390000018900	ENSGT00390000001700.b	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000160590	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	7	ENSGT00390000018900	ENSGT00390000001700.b	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000160590	ENSGT00940000166224	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
European seabass	MODERN SPECIES	18	ENSDLAG00005029000	ENSDLAG00005001835	KIF26B (ENSDLAG00005002655)	SMYD3 (ENSDLAG00005002825)	ENSDLAG00005002970	TFB2M (ENSDLAG00005030793)	ENSDLAG00005003077	ENSDLAG00005002359	ENSDLAG00005003731	ENSDLAG00005004802	ENSDLAG00005029015	ENSDLAG00005004816	ENSDLAG00005029731	ENSDLAG00005004989	ENSDLAG00005031194	ENSDLAG00005005145 #22	ENSDLAG00005005253 ##21	ENSDLAG00005005356 #19	galnt2 (ENSDLAG00005005491)	urb2 (ENSDLAG00005007113)	ABCB10 (ENSDLAG00005007157)	ACTA1 (ENSDLAG00005007471)	ccsapb (ENSDLAG00005030115)	rab4a (ENSDLAG00005032178)	ENSDLAG00005007523	ENSDLAG00005007545	ENSDLAG00005026507	ENSDLAG00005007571	ENSDLAG00005007593	ENSDLAG00005007599	ENSDLAG00005007607
Large yellow croaker	MODERN SPECIES	480	ENSLCRG00005019202	ENSLCRG00005019200	KIF26B (ENSLCRG00005019199)	SMYD3 (ENSLCRG00005019197)	ENSLCRG00005019195	tfb2m (ENSLCRG00005019193)	sccpdha.1 (ENSLCRG00005019188)	gcfc2 (ENSLCRG00005019173)	itsn2b (ENSLCRG00005018459)	ENSLCRG00005018437	ENSLCRG00005018436	ctsba (ENSLCRG00005018354)	ENSLCRG00005018350	ENSLCRG00005018349	ENSLCRG00005018348	KCNK2 (ENSLCRG00005018292) #22	ENSLCRG00005018281 ##21	smyd2a (ENSLCRG00005018272) #19	galnt2 (ENSLCRG00005017902)	urb2 (ENSLCRG00005017895)	ABCB10 (ENSLCRG00005017892)	ACTA1 (ENSLCRG00005017880)	ccsapb (ENSLCRG00005017877)	rab4a (ENSLCRG00005017875)	phf10 (ENSLCRG00005017863)	psmb1 (ENSLCRG00005017859)	psmc3 (ENSLCRG00005017853)	tbp (ENSLCRG00005017851)	pdcd2 (ENSLCRG00005017849)	ENSLCRG00005017848	ppm1g (ENSLCRG00005017804)
Gilthead seabream	MODERN SPECIES	18	KIF26B (ENSSAUG00010008259)	SMYD3 (ENSSAUG00010008233)	ENSSAUG00010008228	tfb2m (ENSSAUG00010008225)	sccpdha.1 (ENSSAUG00010008206)	gcfc2 (ENSSAUG00010008198)	itsn2b (ENSSAUG00010008172)	ENSSAUG00010008162	ENSSAUG00010008161	CTSB (ENSSAUG00010008071)	ENSSAUG00010008065	ENSSAUG00010008062	ENSSAUG00010008060	ENSSAUG00010008057	ENSSAUG00010008055	KCNK2 (ENSSAUG00010008052) #22	ENSSAUG00010008050 ##21	smyd2a (ENSSAUG00010008014) #19	galnt2 (ENSSAUG00010006101)	urb2 (ENSSAUG00010006071)	ABCB10 (ENSSAUG00010004640)	ccsapb (ENSSAUG00010004619)	rab4a (ENSSAUG00010004587)	ENSSAUG00010004550	phf10 (ENSSAUG00010004242)	psmb1 (ENSSAUG00010004197)	psmc3 (ENSSAUG00010004152)	tbp (ENSSAUG00010004104)	pdcd2 (ENSSAUG00010004071)	ENSSAUG00010025727	ppm1g (ENSSAUG00010025721)
Tetraodontidae	ANCESTRAL SPECIES	4	ENSGT00390000018900	ENSGT00390000001700.b	ENSGT00940000165019	ENSGT00940000156992.f	ENSGT00940000156766	ENSGT00390000005861.b	ENSGT00950000183142.a.b.a.b	ENSGT00390000004799	ENSGT00390000000455.b	ENSGT00940000155936.a.a.b	ENSGT00940000154096.a	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00940000158680	ENSGT00390000017953.B	ENSGT00940000167557	ENSGT00940000156560.g #22	ENSGT00730000111187.a.b ##21	ENSGT00940000157082 #19	ENSGT00940000156958	ENSGT00390000009258	ENSGT00940000157680	ENSGT00940000156048.e.a.a.a.b	ENSGT00390000003512.q	ENSGT00940000157464	ENSGT00940000155172	ENSGT00550000075035	ENSGT01020000230346.E	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.f	ENSGT00940000158427
Tetraodon	MODERN SPECIES	20	ENSTNIG00000017707	AHCTF1 (ENSTNIG00000017706)	ENSTNIG00000017705	ENSTNIG00000017704	KIF26B (ENSTNIG00000017703)	ENSTNIG00000017702	ENSTNIG00000017701	tfb2m (ENSTNIG00000017700)	sccpdha.1 (ENSTNIG00000017699)	gcfc2 (ENSTNIG00000017698)	itsn2b (ENSTNIG00000017697)	ENSTNIG00000017696	ctsba (ENSTNIG00000017695)	ENSTNIG00000017694	efcab2 (ENSTNIG00000017693)	ENSTNIG00000017692 #22	smyd2a (ENSTNIG00000017691) #19	galnt2 (ENSTNIG00000017690)	urb2 (ENSTNIG00000017689)	ABCB10 (ENSTNIG00000017688)	ACTA1 (ENSTNIG00000017687)	ccsapb (ENSTNIG00000017686)	rab4a (ENSTNIG00000017685)	phf10 (ENSTNIG00000017684)	psmb1 (ENSTNIG00000017683)	psmc3 (ENSTNIG00000017682)	tbp (ENSTNIG00000017681)	pdcd2 (ENSTNIG00000017680)	ENSTNIG00000017679	ppm1g (ENSTNIG00000003972)	mis12 (ENSTNIG00000003973)
Fugu	MODERN SPECIES	4	ENSTRUG00000033081	ENSTRUG00000030751	ENSTRUG00000010511	tfb2m (ENSTRUG00000010411)	sccpdha.1 (ENSTRUG00000010289)	ENSTRUG00000010129	ENSTRUG00000032758	ENSTRUG00000009768	ENSTRUG00000026731	ENSTRUG00000028098	ENSTRUG00000009671	ENSTRUG00000027443	ctsba (ENSTRUG00000009391)	ENSTRUG00000024945	ENSTRUG00000024210	KCNK2 (ENSTRUG00000008997) #22	ENSTRUG00000008905 ##21	ENSTRUG00000032286	smyd2a (ENSTRUG00000008674) #19	galnt2 (ENSTRUG00000008315)	urb2 (ENSTRUG00000008173)	ABCB10 (ENSTRUG00000008142)	ACTA1 (ENSTRUG00000019713)	ccsapb (ENSTRUG00000019742)	rab4a (ENSTRUG00000030738)	phf10 (ENSTRUG00000007587)	psmb1 (ENSTRUG00000007430)	psmc3 (ENSTRUG00000007383)	tbp (ENSTRUG00000007200)	pdcd2 (ENSTRUG00000024722)	ENSTRUG00000021153
Pinecone sodierfish	MODERN SPECIES	17	DPY19L3 (ENSMMDG00005004622)	ENSMMDG00005004552	ENSMMDG00005004182	pbld (ENSMMDG00005004148)	HNRNPH3 (ENSMMDG00005004137)	rufy2 (ENSMMDG00005003944)	fam120b (ENSMMDG00005003919)	dld (ENSMMDG00005003543)	mis12 (ENSMMDG00005003530)	ppm1g (ENSMMDG00005003481)	ENSMMDG00005003467	ctsba (ENSMMDG00005003129)	ENSMMDG00005003096	efcab2 (ENSMMDG00005003086)	ENSMMDG00005003080	KCNK2 (ENSMMDG00005003033) #22	ENSMMDG00005003013 ##21	smyd2a (ENSMMDG00005002965) #19	galnt2 (ENSMMDG00005002757)	urb2 (ENSMMDG00005022083)	ABCB10 (ENSMMDG00005021820)	ACTA1 (ENSMMDG00005021801)	ccsapb (ENSMMDG00005021799)	rab4a (ENSMMDG00005021798)	phf10 (ENSMMDG00005021715)	psmb1 (ENSMMDG00005021706)	psmc3 (ENSMMDG00005021705)	tbp (ENSMMDG00005021663)	pdcd2 (ENSMMDG00005021659)	ENSMMDG00005021652	ENSMMDG00005021648
Cod	MODERN SPECIES	5	ENSGMOG00000027344	ENSGMOG00000031920	ENSGMOG00000028979	ENSGMOG00000024000	ENSGMOG00000013672	ENSGMOG00000034073	ENSGMOG00000013633	ENSGMOG00000013549	ENSGMOG00000013607	ENSGMOG00000013569	ENSGMOG00000036865	ENSGMOG00000023150	ENSGMOG00000013536	ENSGMOG00000012736	ENSGMOG00000035488	ENSGMOG00000013502 #22	ENSGMOG00000013444 ##21	ENSGMOG00000012468 #19	galnt2 (ENSGMOG00000012464)	urb2 (ENSGMOG00000035168)	ABCB10 (ENSGMOG00000012455)	ENSGMOG00000035196	ccsapb (ENSGMOG00000031177)	rab4a (ENSGMOG00000012446)	ENSGMOG00000012443	ENSGMOG00000012441	ENSGMOG00000012438	ENSGMOG00000012435	ENSGMOG00000012434	ENSGMOG00000012432	ENSGMOG00000012420
Osteoglossiformes	ANCESTRAL SPECIES	439												ENSGT00940000156557.g	ENSGT00940000154790.a.a.b.c #18	ENSGT00940000156874.c.a #20	ENSGT00730000111187.a.b ##21	ENSGT00940000156560.g #22	ENSGT00940000166224	ENSGT00940000158680.j.a	ENSGT00940000158680.j.b
P. kingsleyae	MODERN SPECIES	349																KCNK2 (ENSPKIG00000005192) #22	ENSPKIG00000005161	CTSB (ENSPKIG00000005108)	CTSB (ENSPKIG00000005062)	SAMD4A (ENSPKIG00000004999)	gch1 (ENSPKIG00000004964)	wdhd1 (ENSPKIG00000004863)	TMX1 (ENSPKIG00000004832)	frmd6 (ENSPKIG00000004763)	gng2 (ENSPKIG00000004717)
Asian bonytongue	MODERN SPECIES	6	zgc:162964 (ENSSFOG00015017080)	lin9 (ENSSFOG00015017101)	XDH (ENSSFOG00015017156)	ENSSFOG00015017449	dnajc27 (ENSSFOG00015025414)	EFR3B (ENSSFOG00015017545)	pomca (ENSSFOG00015017610)	ENSSFOG00015017694	snx9a (ENSSFOG00015017714)	prox1a (ENSSFOG00015017766) #18	smyd2a (ENSSFOG00015017786) #19	ENSSFOG00015024296 #20	ENSSFOG00015017813 #20	ENSSFOG00015017829 #20	CENPF (ENSSFOG00015017861) ##21	KCNK2 (ENSSFOG00015017981) #22	ENSSFOG00015029860	CTSB (ENSSFOG00015018007)	CTSB (ENSSFOG00015018040)	ENSSFOG00015026806	ENSSFOG00015018084	tram2 (ENSSFOG00015018111)	ENSSFOG00015025221	gcfc2 (ENSSFOG00015018151)	ITSN2 (ENSSFOG00015018180)	lpin1a (ENSSFOG00015018301)	ENSSFOG00015018391	spata17 (ENSSFOG00015018438)	esrrga (ENSSFOG00015018472)	USH2A (ENSSFOG00015018545)	KCTD3 (ENSSFOG00015018701) #23
Osteoglossocephalai	ANCESTRAL SPECIES	170	ENSGT01030000234555.a.b.f.b	ENSGT00950000183114.a.a	ENSGT00940000166718	ENSGT00940000157133	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00390000002143.b.b	ENSGT00390000016811.g	ENSGT00940000164041	ENSGT00940000156557.h	ENSGT00530000063085.A.a	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000165866	ENSGT00730000111187.a.b ##21	ENSGT00940000156560.g #22	ENSGT00940000166224	ENSGT00940000158680	ENSGT01070000253766.A.a.a.b.a.a	ENSGT00390000016034	ENSGT00940000158349	ENSGT01070000253766.A.a.a.b.a.b	ENSGT00510000046470.a.b	ENSGT00530000063528.A.a	ENSGT00940000180091	ENSGT00940000154096.b.b.a
Osteoglossiformes	ANCESTRAL SPECIES	4	ENSGT00940000162190	ENSGT00390000003188.c	ENSGT01030000234555.a.b.f.a	ENSGT00940000156058	ENSGT00940000157133.h	ENSGT00390000002143.b.a.z	ENSGT00390000016811.h	ENSGT00390000016811.g	ENSGT00940000164041	ENSGT00940000156557.h	ENSGT00530000063085.A.a	ENSGT00940000155656.s #17	ENSGT00940000154790.a.a.b.d #18	ENSGT00940000157082 #19	ENSGT00940000156874.d #20	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000165866	ENSGT00940000158680.i	ENSGT00390000016034	ENSGT00940000158349.l	ENSGT01070000253766.A.a.a.b.a.b	ENSGT00510000046470.a.b.d	ENSGT00530000063528.A.a	ENSGT00940000180091	ENSGT00940000154096.b.b.a	ENSGT00390000009415	ENSGT00940000155936.b.m	ENSGT00940000171406	ENSGT00520000055570.B.l
Asian bonytongue	MODERN SPECIES		acbd3 (ENSSFOG00015019907)	mixl1 (ENSSFOG00015029811)	lin9 (ENSSFOG00015019943)	ENSSFOG00015020065	parp1 (ENSSFOG00015020017)	DNAJC27 (ENSSFOG00015020074)	EFR3B (ENSSFOG00015020097)	pomcb (ENSSFOG00015020172)	ENSSFOG00015020337	SNX9 (ENSSFOG00015020430)	ENSSFOG00015020491	rps6kc1 (ENSSFOG00015020535) #17	prox1a (ENSSFOG00015020586) #18	SMYD2 (ENSSFOG00015020598) #19	PTPN14 (ENSSFOG00015030086) #20	kcnk2b (ENSSFOG00015020640) #22	ENSSFOG00015020648	ABHD1 (ENSSFOG00015000067)	ENSSFOG00015030051	ENSSFOG00015000074	ctsba (ENSSFOG00015000111)	fdft1 (ENSSFOG00015000186)	gata4 (ENSSFOG00015000242)	xkr5a (ENSSFOG00015000277)	tram2 (ENSSFOG00015000283)	efhc1 (ENSSFOG00015000342)	ENSSFOG00015000355	ENSSFOG00015029839	mrpl19 (ENSSFOG00015000393)	ITSN2 (ENSSFOG00015000415)	ENSSFOG00015000597
P. kingsleyae	MODERN SPECIES	83	acbd3 (ENSPKIG00000006236)	mixl1 (ENSPKIG00000006218)	lin9 (ENSPKIG00000006192)	ENSPKIG00000006167	parp1 (ENSPKIG00000006039)	DNAJC27 (ENSPKIG00000005931)	EFR3B (ENSPKIG00000005768)	pomcb (ENSPKIG00000005704)	ENSPKIG00000005689	SNX9 (ENSPKIG00000005581)	ENSPKIG00000005536 #17	RPS6KC1 (ENSPKIG00000005516) #17	prox1a (ENSPKIG00000005483) #18	SMYD2 (ENSPKIG00000005433) #19	PTPN14 (ENSPKIG00000005280) #20	kcnk2b (ENSPKIG00000005197) #22	ENSPKIG00000005139	ABHD1 (ENSPKIG00000005093)	ENSPKIG00000005034	ENSPKIG00000004948	ctsba (ENSPKIG00000004874)	fdft1 (ENSPKIG00000004839)	gata4 (ENSPKIG00000004796)	xkr5a (ENSPKIG00000004777)	ENSPKIG00000004766	efhc1 (ENSPKIG00000004738)	ENSPKIG00000004721	eva1a (ENSPKIG00000004713)	mrpl19 (ENSPKIG00000004696)	ITSN2 (ENSPKIG00000004575)	GNPAT (ENSPKIG00000004459)
Clupeocephala	ANCESTRAL SPECIES	128	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000164041.b.a	ENSGT00940000156557.h	ENSGT00530000063085.A.a	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000165866	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000175851	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b
Otomorpha	ANCESTRAL SPECIES	166	ENSGT00390000003188	ENSGT00940000156058	ENSGT00940000167206	ENSGT01030000234555.a.b.f.a	ENSGT00390000016811.h	ENSGT00940000164041.b.a	ENSGT00940000156557.h	ENSGT00530000063085.A.a	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b.g #18	ENSGT00940000164041.a	ENSGT00940000156557.g	ENSGT00940000154790.a.a.b.h #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000165866	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000175851	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT01050000244948.c.b.a.a.a	ENSGT00940000157477	ENSGT00730000111244.a.b	ENSGT00940000158401	ENSGT00390000013337	ENSGT00390000012924.a
Clupeiformes	ANCESTRAL SPECIES	6	ENSGT00500000044870.a	ENSGT00940000158839	ENSGT00940000160412.a	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00390000016811.h	ENSGT00940000164041.b.a	ENSGT00940000156557.h	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b.g #18	ENSGT00940000156874 #20	ENSGT00940000156560.h #22	ENSGT00940000165510.b	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b
Denticle herring	MODERN SPECIES	5	ENSDCDG00000034326	parp1 (ENSDCDG00000034290)	ENSDCDG00000034277	ENSDCDG00000034276	ENSDCDG00000034266	ENSDCDG00000034259	EFR3B (ENSDCDG00000033886)	pomcb (ENSDCDG00000033865)	ENSDCDG00000033864	SNX9 (ENSDCDG00000033822)	rps6kc1 (ENSDCDG00000033812) #17	ENSDCDG00000033806 #18	ENSDCDG00000033804	SMYD2 (ENSDCDG00000033789) #19	PTPN14 (ENSDCDG00000033759) #20	kcnk2b (ENSDCDG00000033752) #22	ENSDCDG00000033750	ENSDCDG00000033749	ctsbb (ENSDCDG00000033743)	fdft1 (ENSDCDG00000033739)	gata4 (ENSDCDG00000033736)	ENSDCDG00000033734	ENSDCDG00000033730	ENSDCDG00000033727	ENSDCDG00000033723	STX11 (ENSDCDG00000033720)	STX11 (ENSDCDG00000033716)	mthfd1l (ENSDCDG00000033671)	akap12b (ENSDCDG00000033667)	zbtb2b (ENSDCDG00000033665)	armt1 (ENSDCDG00000033663)
Atlantic herring	MODERN SPECIES	6	ENSCHAG00000007953	hebp2 (ENSCHAG00000008010)	acbd3 (ENSCHAG00000008028)	mixl1 (ENSCHAG00000008042)	lin9 (ENSCHAG00000008069)	parp1 (ENSCHAG00000008512)	ENSCHAG00000009072	ENSCHAG00000009099	ENSCHAG00000009616	pomcb (ENSCHAG00000009641)	ENSCHAG00000009799	ENSCHAG00000009869	ENSCHAG00000011980 #17	ENSCHAG00000012089 #20	ENSCHAG00000012205 #19	kcnk2b (ENSCHAG00000012231) #22	ENSCHAG00000002371	ENSCHAG00000002462	gata4 (ENSCHAG00000002508)	fdft1 (ENSCHAG00000002577)	ENSCHAG00000002704	ENSCHAG00000002727	ENSCHAG00000002767	ENSCHAG00000002787	ENSCHAG00000002819	ENSCHAG00000002845	ENSCHAG00000002873	ENSCHAG00000003022	ENSCHAG00000003057	ENSCHAG00000003315	ENSCHAG00000003350
Otophysi	ANCESTRAL SPECIES	423													ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b.g #18	ENSGT00940000156874 #20	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d
Characiphysae	ANCESTRAL SPECIES	102	ENSGT00940000163960.b	ENSGT00520000055570.B.k	ENSGT00390000017022	ENSGT00940000154071.B	ENSGT00390000015936	ENSGT00390000003585	ENSGT00940000153370.a.b	ENSGT00390000002675	ENSGT00940000158461	ENSGT00600000085656	ENSGT00950000183186.A	ENSGT00390000018361	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b.g #18	ENSGT00940000156874 #20	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d
Characiphysae_b	ANCESTRAL SPECIES	299															ENSGT00940000156874 #20	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d
Characoidei	ANCESTRAL SPECIES	425															ENSGT00940000156874 #20	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d
Red-bellied piranha	MODERN SPECIES	621													ENSPNAG00000018546	ENSPNAG00000018564	PTPN14 (ENSPNAG00000018618) #20	kcnk2b (ENSPNAG00000018639) #22	ENSPNAG00000018661	ABHD1 (ENSPNAG00000003546)	ENSPNAG00000019278
Mexicana tetra	MODERN SPECIES	1307															PTPN14 (ENSAMXG00000009745) #20	kcnk2b (ENSAMXG00000009754) #22	ENSAMXG00000009764	ABHD1 (ENSAMXG00000030060)	ABHD1 (ENSAMXG00000033724)
Electric eel	MODERN SPECIES	1073																kcnk2b (ENSEEEG00000018080) #22	ENSEEEG00000018083	sox7 (ENSEEEG00000018091)
Channel catfish	MODERN SPECIES	11	ENSIPUG00000011329	gnpat (ENSIPUG00000011225)	c2h1orf131 (ENSIPUG00000011214)	trim67 (ENSIPUG00000011203)	exoc8 (ENSIPUG00000011188)	sprtn (ENSIPUG00000011175)	fam89a (ENSIPUG00000011156)	arv1 (ENSIPUG00000011137)	ttc13 (ENSIPUG00000011124)	ENSIPUG00000011112	c2h1orf198 (ENSIPUG00000011103)	rps6kc1 (ENSIPUG00000011081) #17	ENSIPUG00000011063 #18	SMYD2 (ENSIPUG00000011020) #19	ptpn14 (ENSIPUG00000010953) #20	kcnk2b (ENSIPUG00000010928) #22	ENSIPUG00000010889	ABHD1 (ENSIPUG00000010873)	ENSIPUG00000010837	CTGF (ENSIPUG00000010786)	moxd1 (ENSIPUG00000010767)	epha7 (ENSIPUG00000010717)	ENSIPUG00000010441	BACH2 (ENSIPUG00000010404)	gja10 (ENSIPUG00000010380)	Casp8ap2 (ENSIPUG00000010358)	MDN1 (ENSIPUG00000010169)	ginm1 (ENSIPUG00000010123)	katna1 (ENSIPUG00000010083)	ginm1 (ENSIPUG00000010024)	ENSIPUG00000010005
Cyprinoidei	ANCESTRAL SPECIES	149														ENSGT00940000164115.C.a.a.a	ENSGT00940000166832	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00940000166379	ENSGT00940000155724.r	ENSGT00940000156078.d	ENSGT00530000063503.a.b.g.a	ENSGT00390000013856	ENSGT00530000063775.a.a	ENSGT00950000182856.a.b.b	ENSGT01060000248564.a.a.a.a.h	ENSGT00940000156953	ENSGT00940000171286	ENSGT00530000063881.a.a	ENSGT00940000158591.g.a	ENSGT00940000156864.d	ENSGT00940000156652
Cyprininae	ANCESTRAL SPECIES	259	ENSGT00940000155723	ENSGT00940000160119	ENSGT00940000164843.b.g.a	ENSGT00940000155462.`b.b.b	ENSGT00940000164843.b.g.b	ENSGT00940000155462.`b.b.a	ENSGT00390000001627	ENSGT00950000183001.a.b.a.a	ENSGT00390000002112.a	ENSGT00390000006522.b.j	ENSGT00940000154317.a.b.b.b	ENSGT00940000155676.g	ENSGT00940000156987.c	ENSGT00940000158991	ENSGT00940000154790.a.a.b.g.a #18	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00940000166379.d	ENSGT00940000155724.r.c	ENSGT00940000156078.d.b	ENSGT00530000063503.a.b.g.a.b	ENSGT00390000013856	ENSGT00530000063775.a.a.d	ENSGT00950000182856.a.b.b.c	ENSGT01060000248564.a.a.a.a.h.a.a	ENSGT00940000156953.d	ENSGT00940000158591.g.a.e	ENSGT00940000156652.i	ENSGT00940000155887.b.a	ENSGT00940000165360	ENSGT00940000157684.a
Cyprininae_a	DUPLICATION
Cyprininae_a	ANCESTRAL SPECIES	345				ENSGT00940000164843.b.g.b	ENSGT00940000155462.`b.b.a	ENSGT00390000001627.o	ENSGT00950000183001.a.b.a.a	ENSGT00390000002112.a	ENSGT00390000006522.b.j	ENSGT00940000155676.h	ENSGT00940000154317.a.b.b.b	ENSGT00940000155676.g	ENSGT00940000156987.c	ENSGT00940000158991	ENSGT00940000154790.a.a.b.g.a #18	ENSGT00940000156560.h.a #22	ENSGT00940000165510	ENSGT00940000166379.d	ENSGT00940000155724.r.c	ENSGT00940000156078.d.b	ENSGT00530000063503.a.b.g.a.b	ENSGT00390000013856	ENSGT00530000063775.a.a.d	ENSGT00950000182856.a.b.b.c	ENSGT01060000248564.a.a.a.a.h.a.a	ENSGT00940000156953.d	ENSGT00940000158591.g.a.e	ENSGT00940000156652.i	ENSGT00940000155887.b.a	ENSGT00940000157684.a	ENSGT00390000004803.r
Common carp reference	MODERN SPECIES	34	ccn6 (ENSCCRG00000003023)	ENSCCRG00000015289	fynb (ENSCCRG00000015327)	NDUFAF4 (ENSCCRG00000015546)	GPR63 (ENSCCRG00000015550)	ufl1 (ENSCCRG00000079835)	ENSCCRG00000027697	ENSCCRG00000073500	COL10A1 (ENSCCRG00000074688)	ENSCCRG00000040581	ENSCCRG00000070369	ENSCCRG00000059646 #18	ENSCCRG00000056967	ENSCCRG00000080108	ENSCCRG00000053911	kcnk2b (ENSCCRG00000057872) #22	ENSCCRG00000054712	nrl (ENSCCRG00000002835)	SENP6 (ENSCCRG00000065270)	myo6a (ENSCCRG00000022500)	ENSCCRG00000033059	nt5e (ENSCCRG00000022848)	snx14 (ENSCCRG00000009292)	cnr1 (ENSCCRG00000081020)	rngtt (ENSCCRG00000018127)	gabrr1 (ENSCCRG00000062871)	GABRR2 (ENSCCRG00000073993)	ube2j1 (ENSCCRG00000046792)	ANKRD6 (ENSCCRG00000033927)	LATS1 (ENSCCRG00000012397)	nup43 (ENSCCRG00000054553)
Golden-line barbel	MODERN SPECIES	518																kcnk2b (ENSSGRG00000025243) #22	ENSSGRG00000025239	nrl (ENSSGRG00000025237)	ENSSGRG00000025235	ENSSGRG00000025234	ENSSGRG00000025233	myo6a (ENSSGRG00000024384)	ENSSGRG00000024355	mei4 (ENSSGRG00000024354)	nt5e (ENSSGRG00000024353)	snx14 (ENSSGRG00000024269)	cnr1 (ENSSGRG00000024255)	rngtt (ENSSGRG00000024229)	gabrr1 (ENSSGRG00000024224)	ENSSGRG00000024222	GABRR2 (ENSSGRG00000024221)
Cyprininae_a	ANCESTRAL SPECIES	408	ENSGT00390000006395	ENSGT00730000111419.a.c	ENSGT00940000165424.a.a.a.a	ENSGT00940000155723	ENSGT00940000160119	ENSGT00940000164843.b.g.a	ENSGT00940000155462.`b.b.b	ENSGT00390000001627.p	ENSGT00950000183001.a.b.a.b	ENSGT00390000002112.b	ENSGT00390000006522.b.i	ENSGT00940000154317.a.b.b.a	ENSGT00940000156987.d	ENSGT00940000164115.C.a.a.a	ENSGT00940000166832.a	ENSGT00940000156560.h.b #22
Golden-line barbel	MODERN SPECIES	160														ENSSGRG00000030831	smyd2b (ENSSGRG00000030832)	kcnk2b (ENSSGRG00000030836) #22	ENSSGRG00000030838	ENSSGRG00000030839	nlk2 (ENSSGRG00000030841)	lyrm9 (ENSSGRG00000030886)	nos2b (ENSSGRG00000030890)	msi2b (ENSSGRG00000031096)	akap1b (ENSSGRG00000031100)	NF1 (ENSSGRG00000031139)	OMG (ENSSGRG00000031350)	ENSSGRG00000031351	KSR1 (ENSSGRG00000031353)	wsb1 (ENSSGRG00000031358)	cuedc1b (ENSSGRG00000031361)	vezf1b (ENSSGRG00000031371)	ENSSGRG00000031373
Goldfish	MODERN SPECIES	12	marcksa (ENSCARG00000027739)	lama4 (ENSCARG00000027968)	tube1 (ENSCARG00000036807)	ccn6 (ENSCARG00000036922)	si:dkey-119m7.4 (ENSCARG00000036956)	fynb (ENSCARG00000036984)	NDUFAF4 (ENSCARG00000037313)	GPR63 (ENSCARG00000037322)	ufl1 (ENSCARG00000037382)	dse (ENSCARG00000039511)	nt5dc1 (ENSCARG00000039529)	COL10A1 (ENSCARG00000040127)	FRK (ENSCARG00000040135)	HS3ST5 (ENSCARG00000040172)	ENSCARG00000040180 #18	kcnk2b (ENSCARG00000040189) #22	nrl (ENSCARG00000040209)	SENP6 (ENSCARG00000040225)	myo6a (ENSCARG00000003683)	ENSCARG00000003728	nt5e (ENSCARG00000003735)	snx14 (ENSCARG00000003771)	cnr1 (ENSCARG00000003897)	rngtt (ENSCARG00000003928)	ENSCARG00000003998	gabrr1 (ENSCARG00000004032)	GABRR2 (ENSCARG00000004128)	ube2j1 (ENSCARG00000004210)	ENSCARG00000004236	ENSCARG00000004240	lats1 (ENSCARG00000004256)
Zebrafish	MODERN SPECIES	12	tube1 (ENSDARG00000096620)	ccn6 (ENSDARG00000071048)	si:dkey-119m7.4 (ENSDARG00000071049)	ENSDARG00000096654	fynb (ENSDARG00000025319)	NDUFAF4 (ENSDARG00000077859)	GPR63 (ENSDARG00000074540)	ufl1 (ENSDARG00000007496)	FRK (ENSDARG00000027807)	nt5dc1 (ENSDARG00000006797)	COL10A1 (ENSDARG00000101535)	ENSDARG00000111552	dse (ENSDARG00000017988)	ENSDARG00000069661	smyd2b (ENSDARG00000005629)	kcnk2b (ENSDARG00000007151) #22	ENSDARG00000014232	nrl (ENSDARG00000100466)	ENSDARG00000102923	myo6a (ENSDARG00000044016)	ENSDARG00000077187	mei4 (ENSDARG00000043912)	nt5e (ENSDARG00000071017)	snx14 (ENSDARG00000006332)	cnr1 (ENSDARG00000009020)	rngtt (ENSDARG00000032261)	ENSDARG00000100202	pnrc1 (ENSDARG00000043904)	gabrr1 (ENSDARG00000043902)	GABRR2 (ENSDARG00000014057)	ube2j1 (ENSDARG00000033489)
Euteleosteomorpha	ANCESTRAL SPECIES	81	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000164041.b.a	ENSGT00940000156557.h	ENSGT00530000063085.A.a	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874 #20	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a
Acanthomorphata	ANCESTRAL SPECIES	59	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253
Euacanthomorphacea	ANCESTRAL SPECIES	13	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253
Pinecone sodierfish	MODERN SPECIES	16	mixl1 (ENSMMDG00005020865)	lin9 (ENSMMDG00005020869)	parp1 (ENSMMDG00005020925)	ENSMMDG00005021053	ENSMMDG00005021054	ENSMMDG00005021056	EFR3B (ENSMMDG00005021097)	ENSMMDG00005021916	PTPN14 (ENSMMDG00005021926) #20	ENSMMDG00005021949	prox1a (ENSMMDG00005022034) #18	rps6kc1 (ENSMMDG00005022048) #17	ENSMMDG00005022061	SNX9 (ENSMMDG00005022117)	ENSMMDG00005022952	kcnk2b (ENSMMDG00005022955) #22	ABHD1 (ENSMMDG00005022961)	fdft1 (ENSMMDG00005023104)	gata4 (ENSMMDG00005023111)	ctsbb (ENSMMDG00005023115)	ENSMMDG00005023117	NCOA7 (ENSMMDG00005023120)	ENSMMDG00005023124	ENSMMDG00005023126	ppp1r13bb (ENSMMDG00005023164)	daam1b (ENSMMDG00005023665)	L3HYPDH (ENSMMDG00005023696)	kcnh5a (ENSMMDG00005023702)	ENSMMDG00005023704	abcd4 (ENSMMDG00005023733)	ENSMMDG00005023918
Percomorphaceae	ANCESTRAL SPECIES	14	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253
Tiger tail seahorse	MODERN SPECIES	182	ENSHCOG00000011445	ENSHCOG00000011397	ENSHCOG00000011380	ENSHCOG00000011371	ENSHCOG00000011360	LPIN1 (ENSHCOG00000011352)	ENSHCOG00000011337	si:ch73-21k16.4 (ENSHCOG00000011331)	esrrgb (ENSHCOG00000011308)	gata4 (ENSHCOG00000011288)	fdft1 (ENSHCOG00000011258)	ABHD1 (ENSHCOG00000011239)	ENSHCOG00000011227	SNX9 (ENSHCOG00000011190)	ENSHCOG00000011121	kcnk2b (ENSHCOG00000011066) #22	ENSHCOG00000011001	rps6kc1 (ENSHCOG00000010990) #17
Percomorphaceae_B	ANCESTRAL SPECIES	18	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000175851	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b
Ovalentaria	ANCESTRAL SPECIES	19	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000175851	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b
Atherinomorphae	ANCESTRAL SPECIES	18	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000175851	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253
Cyprinodontiformes	ANCESTRAL SPECIES	14	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000175851	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253
Aplocheiloidei	ANCESTRAL SPECIES	36	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00940000169582	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000178926	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000175851	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253
Mangrove rivulus	MODERN SPECIES	70	NHSL1 (ENSKMAG00000011490)	acbd3 (ENSKMAG00000011560)	mixl1 (ENSKMAG00000011573)	lin9 (ENSKMAG00000011595)	parp1 (ENSKMAG00000011627)	ENSKMAG00000011690	EFR3B (ENSKMAG00000011739)	ENSKMAG00000011812	PTPN14 (ENSKMAG00000011829) #20	ENSKMAG00000011872	prox1a (ENSKMAG00000011924) #18	rps6kc1 (ENSKMAG00000011947) #17	ENSKMAG00000011979	SNX9 (ENSKMAG00000012008)	ENSKMAG00000012063	kcnk2b (ENSKMAG00000012086) #22	ENSKMAG00000012115	ENSKMAG00000012175	ctsbb (ENSKMAG00000012243)	fdft1 (ENSKMAG00000012281)	gata4 (ENSKMAG00000012323)	ENSKMAG00000012337	ENSKMAG00000012346	ENSKMAG00000012361	ppp1r13bb (ENSKMAG00000012386)	daam1b (ENSKMAG00000012440)	L3HYPDH (ENSKMAG00000012501)	KCNH5 (ENSKMAG00000012537)
Turquoise killifish	MODERN SPECIES	1613	mixl1 (ENSNFUG00015005040)	lin9 (ENSNFUG00015004993)	ENSNFUG00015004930	parp1 (ENSNFUG00015004671)	ENSNFUG00015004503	EFR3BB (ENSNFUG00015004341)	ENSNFUG00015004295	PTPN14 (ENSNFUG00015004291) #20	smyd2b (ENSNFUG00015004273)	ENSNFUG00015004257	PROX1 (ENSNFUG00015004242) #18	RPS6KC1 (ENSNFUG00015004163) #17	ENSNFUG00015004139	ENSNFUG00015004132	SNX9 (ENSNFUG00015004002)	KCNK2B (ENSNFUG00015003932) #22	ABHD1 (ENSNFUG00015003927)	ctsbb (ENSNFUG00015003917)	FDFT1 (ENSNFUG00015003910)	gata4 (ENSNFUG00015003901)	NCOA7 (ENSNFUG00015003895)	ENSNFUG00015003889	ENSNFUG00015003887	DAAM1B (ENSNFUG00015003756)	CABZ01039235.1 (ENSNFUG00015003724)	kcnh5a (ENSNFUG00015003719)	SGPP1 (ENSNFUG00015003712)	ABCD4 (ENSNFUG00015003638)	ENSNFUG00015003592	ENSNFUG00015003577	UTRN (ENSNFUG00015003325)
Cyprinodontoidei	ANCESTRAL SPECIES	12	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000175851	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253
NAME_4	ANCESTRAL SPECIES	8	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT01030000234555.a.b.f.a	ENSGT00940000156058	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000175851	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253
Mummichog	MODERN SPECIES	2240	mixl1 (ENSFHEG00000001103)	lin9 (ENSFHEG00000001107)	lin9 (ENSFHEG00000001109)	ENSFHEG00000001111	parp1 (ENSFHEG00000001117)	ENSFHEG00000001125	EFR3B (ENSFHEG00000001130)	ENSFHEG00000001134	PTPN14 (ENSFHEG00000001138) #20	ENSFHEG00000001143	prox1a (ENSFHEG00000001147) #18	rps6kc1 (ENSFHEG00000001150) #17	ENSFHEG00000001154	SNX9 (ENSFHEG00000001170)	ENSFHEG00000000050	kcnk2b (ENSFHEG00000001196) #22	ENSFHEG00000001199	ENSFHEG00000001201	ENSFHEG00000001206	ctsbb (ENSFHEG00000001209)	fdft1 (ENSFHEG00000001212)	gata4 (ENSFHEG00000001214)	NCOA7 (ENSFHEG00000001220)	ENSFHEG00000001227	ppp1r13bb (ENSFHEG00000001247)	daam1b (ENSFHEG00000001262)	L3HYPDH (ENSFHEG00000001273)	kcnh5a (ENSFHEG00000001276)	SGPP1 (ENSFHEG00000001281)	abcd4 (ENSFHEG00000001288)	ENSFHEG00000001297
Sheepshead minnow	MODERN SPECIES	116	acbd3 (ENSCVAG00000021202)	mixl1 (ENSCVAG00000021246)	lin9 (ENSCVAG00000021253)	ENSCVAG00000021272	parp1 (ENSCVAG00000021372)	ENSCVAG00000021766	EFR3B (ENSCVAG00000021893)	ENSCVAG00000021950	PTPN14 (ENSCVAG00000022019) #20	smyd2b (ENSCVAG00000022057)	prox1a (ENSCVAG00000022069) #18	rps6kc1 (ENSCVAG00000022089) #17	ENSCVAG00000022097	SNX9 (ENSCVAG00000022206)	ENSCVAG00000022220	kcnk2b (ENSCVAG00000022243) #22	ENSCVAG00000022279	ABHD1 (ENSCVAG00000022287)	ctsbb (ENSCVAG00000022308)	fdft1 (ENSCVAG00000022314)	gata4 (ENSCVAG00000022324)	ENSCVAG00000022331	ENSCVAG00000022346	ENSCVAG00000000732	ppp1r13bb (ENSCVAG00000022434)	daam1b (ENSCVAG00000022472)	L3HYPDH (ENSCVAG00000022480)	kcnh5a (ENSCVAG00000022520)	SGPP1 (ENSCVAG00000022532)	abcd4 (ENSCVAG00000022611)	ENSCVAG00000022663
Poeciliinae	ANCESTRAL SPECIES	15	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000155141.x	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253
Poecilia	ANCESTRAL SPECIES	9	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253	ENSGT00940000157776.c.a
Guppy	DUPLICATION
Guppy	MODERN SPECIES	188																ENSPREG00000014997 #22
Guppy	MODERN SPECIES	452	acbd3 (ENSPREG00000001402)	mixl1 (ENSPREG00000001369)	lin9 (ENSPREG00000001237)	ENSPREG00000001210	parp1 (ENSPREG00000001114)	ENSPREG00000001081	EFR3B (ENSPREG00000001028)	POMC (ENSPREG00000000968)	PTPN14 (ENSPREG00000000870) #20	ENSPREG00000000790	prox1a (ENSPREG00000000769) #18	rps6kc1 (ENSPREG00000000738) #17	ENSPREG00000000670	SNX9 (ENSPREG00000000638)	ENSPREG00000000624	kcnk2b (ENSPREG00000020326) #22	ENSPREG00000020313	ENSPREG00000020292	ABHD1 (ENSPREG00000020269)	ctsbb (ENSPREG00000020258)	fdft1 (ENSPREG00000020248)	gata4 (ENSPREG00000020235)	NCOA7 (ENSPREG00000020213)	ENSPREG00000020200	ppp1r13bb (ENSPREG00000020137)	daam1b (ENSPREG00000020021)	L3HYPDH (ENSPREG00000019977)	kcnh5a (ENSPREG00000019954)	ENSPREG00000019931	abcd4 (ENSPREG00000019886)	ENSPREG00000019814
NAME_6	ANCESTRAL SPECIES	2	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253	ENSGT00940000168254
Sailfin molly	MODERN SPECIES	890												rps6kc1 (ENSPLAG00000020453) #17	ENSPLAG00000020441	SNX9 (ENSPLAG00000020384)	ENSPLAG00000020285	kcnk2b (ENSPLAG00000020261) #22	ENSPLAG00000020237	ENSPLAG00000020200	ABHD1 (ENSPLAG00000020153)	ctsbb (ENSPLAG00000020076)	fdft1 (ENSPLAG00000020047)	gata4 (ENSPLAG00000020038)	NCOA7 (ENSPLAG00000020026)
Amazon molly	MODERN SPECIES	304	acbd3 (ENSPFOG00000002048)	mixl1 (ENSPFOG00000002132)	lin9 (ENSPFOG00000002168)	parp1 (ENSPFOG00000002342)	ENSPFOG00000020508	ENSPFOG00000002814	EFR3B (ENSPFOG00000003161)	POMC (ENSPFOG00000003288)	PTPN14 (ENSPFOG00000003299) #20	smyd2b (ENSPFOG00000003553)	prox1a (ENSPFOG00000003774) #18	rps6kc1 (ENSPFOG00000003901) #17	ENSPFOG00000004129	SNX9 (ENSPFOG00000004400)	ENSPFOG00000004737	kcnk2b (ENSPFOG00000004806) #22	ENSPFOG00000005024	ENSPFOG00000005269	ctsbb (ENSPFOG00000005337)	fdft1 (ENSPFOG00000005358)	gata4 (ENSPFOG00000022572)	NCOA7 (ENSPFOG00000005513)	ENSPFOG00000005680	ppp1r13bb (ENSPFOG00000005703)	daam1b (ENSPFOG00000005990)	L3HYPDH (ENSPFOG00000006416)	kcnh5a (ENSPFOG00000006503)	ENSPFOG00000006631	abcd4 (ENSPFOG00000006709)	ENSPFOG00000006934	batf (ENSPFOG00000007199)
Platyfish	MODERN SPECIES	6	mixl1 (ENSXMAG00000007472)	lin9 (ENSXMAG00000007451)	parp1 (ENSXMAG00000003632)	ENSXMAG00000019547	ENSXMAG00000025693	ENSXMAG00000003633	EFR3B (ENSXMAG00000003648)	POMC (ENSXMAG00000003681)	PTPN14 (ENSXMAG00000003682) #20	smyd2b (ENSXMAG00000003700)	prox1a (ENSXMAG00000003709) #18	rps6kc1 (ENSXMAG00000003715) #17	ENSXMAG00000003722	SNX9 (ENSXMAG00000003732)	ENSXMAG00000003752	KCNK2 (ENSXMAG00000021485) #22	ENSXMAG00000024204	ABHD1 (ENSXMAG00000003774)	ctsbb (ENSXMAG00000003780)	fdft1 (ENSXMAG00000003786)	ENSXMAG00000024126	gata4 (ENSXMAG00000009238)	ENSXMAG00000022620	ENSXMAG00000030054	ENSXMAG00000003810	ppp1r13bb (ENSXMAG00000003812)	daam1b (ENSXMAG00000003836)	L3HYPDH (ENSXMAG00000003859)	kcnh5a (ENSXMAG00000003864)	SGPP1 (ENSXMAG00000022329)	abcd4 (ENSXMAG00000003885)
Oryzias	ANCESTRAL SPECIES	69														ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000175851	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253
Oryzias_b	ANCESTRAL SPECIES	17	ENSGT00940000159576	ENSGT00940000158416.q.b	ENSGT00940000164385.a.b	ENSGT00950000182919.A.p	ENSGT00940000155625	ENSGT00940000164536.a.a	ENSGT00390000000509	ENSGT00950000183068.b.c.b	ENSGT00950000182966.A.a.a.i.c.b.b	ENSGT00950000182966.A.a.a.j	ENSGT00950000182966.A.a.a.i.c.b.a	ENSGT00950000182966.A.a.a.i.c.a.a.a.a	ENSGT00950000182966.A.a.a.i.c.a.a.a.b	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000175851	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253
Javanese ricefish	MODERN SPECIES	16	ENSOJAG00000023388	pou3f2a (ENSOJAG00000023395)	FAXC (ENSOJAG00000023399)	ccnc (ENSOJAG00000023411)	ngs (ENSOJAG00000023425)	pgm3 (ENSOJAG00000023429)	ENSOJAG00000023430	ENSOJAG00000023432	ENSOJAG00000008187	zgc:194202 (ENSOJAG00000008217)	ENSOJAG00000008247	ENSOJAG00000008257	ENSOJAG00000008266	SNX9 (ENSOJAG00000008311)	ENSOJAG00000008835	kcnk2b (ENSOJAG00000008846) #22	ENSOJAG00000008865	ABHD1 (ENSOJAG00000008887)	ctsbb (ENSOJAG00000008909)	fdft1 (ENSOJAG00000009013)	gata4 (ENSOJAG00000009077)	NCOA7 (ENSOJAG00000009107)	ENSOJAG00000009132	ppp1r13bb (ENSOJAG00000009319)	daam1b (ENSOJAG00000010373)	L3HYPDH (ENSOJAG00000010931)	kcnh5a (ENSOJAG00000010939)	SGPP1 (ENSOJAG00000010992)	abcd4 (ENSOJAG00000011060)	ENSOJAG00000011695	vsx2 (ENSOJAG00000012286)
Indian medaka	MODERN SPECIES	22	xrn2 (ENSOMEG00000019820)	insm1a (ENSOMEG00000019839)	ENSOMEG00000019855	crnkl1 (ENSOMEG00000019895)	naa20 (ENSOMEG00000019922)	ENSOMEG00000020110	COL12A1 (ENSOMEG00000020394)	mei4 (ENSOMEG00000020504)	HTR1B (ENSOMEG00000020510)	myo6a (ENSOMEG00000020564)	SENP6 (ENSOMEG00000020664)	tmed10 (ENSOMEG00000020712)	fosab (ENSOMEG00000020744)	ENSOMEG00000020753	jdp2b (ENSOMEG00000020762)	KCNK2 (ENSOMEG00000020822) #22	ENSOMEG00000020847	ENSOMEG00000020852	ABHD1 (ENSOMEG00000020885)	ctsbb (ENSOMEG00000020921)	fdft1 (ENSOMEG00000020947)	gata4 (ENSOMEG00000020993)	ENSOMEG00000021005	ENSOMEG00000021020	ENSOMEG00000021030	ENSOMEG00000021063	ppp1r13bb (ENSOMEG00000021175)	daam1b (ENSOMEG00000021362)	L3HYPDH (ENSOMEG00000021423)	kcnh5a (ENSOMEG00000021461)	abcd4 (ENSOMEG00000021555)
Oryzias_a	ANCESTRAL SPECIES	39	ENSGT00390000004987	ENSGT00550000074931	ENSGT00550000075046	ENSGT00940000155926.e	ENSGT00940000154923.C.w.b	ENSGT00390000013856	ENSGT01010000222287.B.b.a.b.b.a	ENSGT00530000063503.a.b.g.a.e	ENSGT00940000168150.b	ENSGT00940000156078.d	ENSGT00940000155724.r	ENSGT01000000221402	ENSGT00950000182902.a.d	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253	ENSGT00940000157776.c.a	ENSGT00550000074908
Japanese Medaka HdrR	MODERN SPECIES	16	CFAP61 (ENSORLG00000017228)	crnkl1 (ENSORLG00000017240)	naa20 (ENSORLG00000017247)	ENSORLG00000017259	ENSORLG00000017285	ENSORLG00000017291	HTR1B (ENSORLG00000017292)	ENSORLG00000024567	IMPG1 (ENSORLG00000017297)	myo6a (ENSORLG00000017306)	ENSORLG00000017309	ENSORLG00000027607	ABHD1 (ENSORLG00000017314)	SNX9 (ENSORLG00000017321)	ENSORLG00000017323	ENSORLG00000017331 #22	ENSORLG00000017340	ctsbb (ENSORLG00000017347)	fdft1 (ENSORLG00000017362)	gata4 (ENSORLG00000017374)	ENSORLG00000017384	ENSORLG00000027447	ppp1r13bb (ENSORLG00000017405)	daam1b (ENSORLG00000017437)	ENSORLG00000017447	ENSORLG00000027814	ENSORLG00000017450	abcd4 (ENSORLG00000017458)	ENSORLG00000017485	ENSORLG00000022205	eif2b2 (ENSORLG00000017494)
Ovalentaria_B	ANCESTRAL SPECIES	17	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000175851	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b
Cichlidae	ANCESTRAL SPECIES	12	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000175851	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	6	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00730000111174.f	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b
Nile tilapia	MODERN SPECIES	6	acbd3 (ENSONIG00000013477)	mixl1 (ENSONIG00000013479)	lin9 (ENSONIG00000013480)	ENSONIG00000020898	parp1 (ENSONIG00000013486)	ENSONIG00000013497	EFR3B (ENSONIG00000013501)	ENSONIG00000013507	PTPN14 (ENSONIG00000013508) #20	ENSONIG00000013514	prox1a (ENSONIG00000013518) #18	rps6kc1 (ENSONIG00000038709) #17	ENSONIG00000013521	SNX9 (ENSONIG00000013524)	ENSONIG00000013537	KCNK2 (ENSONIG00000013538) #22	ENSONIG00000013541	ABHD1 (ENSONIG00000013550)	ctsbb (ENSONIG00000040884)	ctsbb (ENSONIG00000038588)	fdft1 (ENSONIG00000013551)	gata4 (ENSONIG00000013554)	NCOA7 (ENSONIG00000013557)	HINT3 (ENSONIG00000013561)	ENSONIG00000041404	ENSONIG00000013564	ppp1r13bb (ENSONIG00000013567)	daam1b (ENSONIG00000013573)	L3HYPDH (ENSONIG00000013579)	KCNH5 (ENSONIG00000013580)	SGPP1 (ENSONIG00000030916)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	3	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT01030000234555.a.b.f.a	ENSGT00940000156058	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00730000111174.f	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b
Haplochromini	ANCESTRAL SPECIES	13	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT01030000234555.a.b.f.a	ENSGT00940000156058	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d.c	ENSGT00950000182902.a.d.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349.p	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00730000111174.f	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b
Haplochromini_A	ANCESTRAL SPECIES	11	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT01030000234555.a.b.f.a	ENSGT00940000156058	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d.c	ENSGT00950000182902.a.d.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349.p	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00730000111174.f	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b
Haplochromini_B	ANCESTRAL SPECIES	22	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT01030000234555.a.b.f.a	ENSGT00940000156058	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d.c	ENSGT00950000182902.a.d.d	ENSGT00940000166128.c	ENSGT00390000016034	ENSGT00940000158349.p	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00730000111174.f	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b
Eastern happy	MODERN SPECIES	6	lin9 (ENSACLG00000015600)	ENSACLG00000015586	ENSACLG00000015578	parp1 (ENSACLG00000015489)	ENSACLG00000015404	EFR3B (ENSACLG00000015187)	ENSACLG00000015179	PTPN14 (ENSACLG00000014973) #20	smyd2b (ENSACLG00000014922)	prox1a (ENSACLG00000014892) #18	ENSACLG00000014879	rps6kc1 (ENSACLG00000014835) #17	ENSACLG00000014824	SNX9 (ENSACLG00000014580)	ENSACLG00000014541	kcnk2b (ENSACLG00000014487) #22	ENSACLG00000014418	ENSACLG00000014401	ENSACLG00000014393	ctsbb (ENSACLG00000014361)	fdft1 (ENSACLG00000014331)	gata4 (ENSACLG00000014316)	ENSACLG00000014282	ENSACLG00000014265	cfap45 (ENSACLG00000014253)	ENSACLG00000014246	ppp1r13bb (ENSACLG00000013884)	daam1b (ENSACLG00000013675)	L3HYPDH (ENSACLG00000013408)	ENSACLG00000013387	SGPP1 (ENSACLG00000013382)
Zebra mbuna	MODERN SPECIES	1097	acbd3 (ENSMZEG00005016962)	mixl1 (ENSMZEG00005016955)	lin9 (ENSMZEG00005016945)	ENSMZEG00005016938	parp1 (ENSMZEG00005016907)	ENSMZEG00005016887	EFR3B (ENSMZEG00005016865)	ENSMZEG00005016860	PTPN14 (ENSMZEG00005016848) #20	smyd2b (ENSMZEG00005016828)	prox1a (ENSMZEG00005016822) #18	rps6kc1 (ENSMZEG00005016813) #17	ENSMZEG00005016806	SNX9 (ENSMZEG00005016760)	ENSMZEG00005016750	kcnk2b (ENSMZEG00005016731) #22	ENSMZEG00005016725	ENSMZEG00005016721	ENSMZEG00005016701	ctsbb (ENSMZEG00005016694)	ctsbb (ENSMZEG00005016681)	fdft1 (ENSMZEG00005016673)	gata4 (ENSMZEG00005016668)	ENSMZEG00005016663	ENSMZEG00005016662	cfap45 (ENSMZEG00005016659)	ENSMZEG00005016655	ppp1r13bb (ENSMZEG00005016646)	daam1b (ENSMZEG00005016609)	L3HYPDH (ENSMZEG00005016595)	ENSMZEG00005016585
P. nyererei	MODERN SPECIES	353	acbd3 (ENSPNYG00000009812)	mixl1 (ENSPNYG00000009793)	lin9 (ENSPNYG00000009773)	ENSPNYG00000009756	parp1 (ENSPNYG00000009702)	ENSPNYG00000009613	EFR3B (ENSPNYG00000009546)	ENSPNYG00000009507	PTPN14 (ENSPNYG00000009449) #20	smyd2b (ENSPNYG00000009401)	prox1a (ENSPNYG00000009378) #18	rps6kc1 (ENSPNYG00000009316) #17	ENSPNYG00000009274	SNX9 (ENSPNYG00000009183)	ENSPNYG00000009021	kcnk2b (ENSPNYG00000008908) #22	ENSPNYG00000008873	ENSPNYG00000008838	fdft1 (ENSPNYG00000008796)	gata4 (ENSPNYG00000008780)	ENSPNYG00000008766	ENSPNYG00000008713	ENSPNYG00000008699	cfap45 (ENSPNYG00000008667)	ppp1r13bb (ENSPNYG00000008590)	daam1b (ENSPNYG00000008482)	L3HYPDH (ENSPNYG00000008417)	kcnh5a (ENSPNYG00000008374)	SGPP1 (ENSPNYG00000008350)	abcd4 (ENSPNYG00000008312)	ENSPNYG00000008264
Burton s mouthbrooder	MODERN SPECIES	276	acbd3 (ENSHBUG00000000266)	mixl1 (ENSHBUG00000010251)	lin9 (ENSHBUG00000000941)	ENSHBUG00000010414	parp1 (ENSHBUG00000010490)	ENSHBUG00000010620	EFR3B (ENSHBUG00000010728)	ENSHBUG00000010750	PTPN14 (ENSHBUG00000010841) #20	smyd2b (ENSHBUG00000010878)	prox1a (ENSHBUG00000010886) #18	rps6kc1 (ENSHBUG00000010938) #17	ENSHBUG00000010948	SNX9 (ENSHBUG00000011134)	ENSHBUG00000011150	kcnk2b (ENSHBUG00000011176) #22	ENSHBUG00000011231	ENSHBUG00000011462	ENSHBUG00000011479	ctsbb (ENSHBUG00000011508)	fdft1 (ENSHBUG00000000314)	gata4 (ENSHBUG00000011525)	ENSHBUG00000011535	ENSHBUG00000011597	ENSHBUG00000011601	cfap45 (ENSHBUG00000011608)	ENSHBUG00000011631	ppp1r13bb (ENSHBUG00000011733)	daam1b (ENSHBUG00000011796)	L3HYPDH (ENSHBUG00000011810)	kcnh5a (ENSHBUG00000011838)
Lyretail cichlid	MODERN SPECIES	338	acbd3 (ENSNBRG00000017356)	mixl1 (ENSNBRG00000017395)	lin9 (ENSNBRG00000017407)	parp1 (ENSNBRG00000017434)	ENSNBRG00000017476	ENSNBRG00000017502	EFR3B (ENSNBRG00000017592)	ENSNBRG00000017628	PTPN14 (ENSNBRG00000017657) #20	smyd2b (ENSNBRG00000017696)	prox1a (ENSNBRG00000017729) #18	rps6kc1 (ENSNBRG00000017759) #17	ENSNBRG00000017813	SNX9 (ENSNBRG00000017834)	ENSNBRG00000017925	kcnk2b (ENSNBRG00000018071) #22	ENSNBRG00000018096	ENSNBRG00000018131	ENSNBRG00000018182	ctsbb (ENSNBRG00000018306)	fdft1 (ENSNBRG00000018326)	gata4 (ENSNBRG00000018383)	NCOA7 (ENSNBRG00000018393)	ENSNBRG00000018411	cfap45 (ENSNBRG00000018424)	ENSNBRG00000018451	ppp1r13bb (ENSNBRG00000018494)	daam1b (ENSNBRG00000018527)	L3HYPDH (ENSNBRG00000018569)	ENSNBRG00000018603	SGPP1 (ENSNBRG00000018629)
Midas cichlid	MODERN SPECIES	271	acbd3 (ENSACIG00000005772)	mixl1 (ENSACIG00000005755)	lin9 (ENSACIG00000005720)	ENSACIG00000005709	parp1 (ENSACIG00000005651)	ENSACIG00000005449	EFR3B (ENSACIG00000005402)	POMC (ENSACIG00000005372)	PTPN14 (ENSACIG00000005336) #20	ENSACIG00000005314	prox1a (ENSACIG00000005302) #18	rps6kc1 (ENSACIG00000005250) #17	ENSACIG00000005222	SNX9 (ENSACIG00000005187)	ENSACIG00000005130	kcnk2b (ENSACIG00000005070) #22	ENSACIG00000005027	ENSACIG00000004910	ctsbb (ENSACIG00000004873)	fdft1 (ENSACIG00000004817)	gata4 (ENSACIG00000004792)	ENSACIG00000004787	ENSACIG00000004773	ENSACIG00000004761	ENSACIG00000004714	ppp1r13bb (ENSACIG00000004683)	daam1b (ENSACIG00000004636)	L3HYPDH (ENSACIG00000004618)	kcnh5a (ENSACIG00000004587)	ENSACIG00000004575	abcd4 (ENSACIG00000004535)
Pomacentridae	ANCESTRAL SPECIES	34	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT01030000234555.a.b.f.a	ENSGT00940000156058	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000175851	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b
Pomacentridae_A	ANCESTRAL SPECIES	33	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT01030000234555.a.b.f.a	ENSGT00940000156058	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000175851	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b
Amphiprion	ANCESTRAL SPECIES	51	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT01030000234555.a.b.f.a	ENSGT00940000156058	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874.k #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000175851	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00950000182906.b.a.i.b	ENSGT00510000048701.a	ENSGT00940000156778.l	ENSGT00530000063408.A	ENSGT00950000182844.b.a.d	ENSGT00390000002089.a.a.a
Clown anemonefish	MODERN SPECIES	821												rps6kc1 (ENSAOCG00000013007) #17	ENSAOCG00000012979	SNX9 (ENSAOCG00000012899)	ENSAOCG00000002638	KCNK2 (ENSAOCG00000000788) #22	ENSAOCG00000012706	ABHD1 (ENSAOCG00000012597)
Orange clownfish	MODERN SPECIES	2	acbd3 (ENSAPEG00000004954)	mixl1 (ENSAPEG00000004910)	lin9 (ENSAPEG00000004895)	ENSAPEG00000004876	parp1 (ENSAPEG00000004784)	ENSAPEG00000004459	EFR3B (ENSAPEG00000004292)	ENSAPEG00000004234	PTPN14 (ENSAPEG00000004182) #20	ENSAPEG00000004123	prox1a (ENSAPEG00000004085) #18	rps6kc1 (ENSAPEG00000004027) #17	ENSAPEG00000003953	SNX9 (ENSAPEG00000003792)	ENSAPEG00000003766	KCNK2 (ENSAPEG00000003734) #22	ENSAPEG00000003659	ABHD1 (ENSAPEG00000003421)	ctsbb (ENSAPEG00000003351)	fdft1 (ENSAPEG00000003327)	gata4 (ENSAPEG00000003312)	ENSAPEG00000003285	ENSAPEG00000003236	ENSAPEG00000003207	ENSAPEG00000003155	stxbp5a (ENSAPEG00000003052)	SAMD5 (ENSAPEG00000003040)	sash1a (ENSAPEG00000002836)	usta (ENSAPEG00000002751)	rhag (ENSAPEG00000002698)	rd3 (ENSAPEG00000002681)
Spiny chromis	MODERN SPECIES	210							EFR3B (ENSAPOG00000003525)	ENSAPOG00000003544	PTPN14 (ENSAPOG00000003587) #20	smyd2b (ENSAPOG00000003636)	prox1a (ENSAPOG00000003670) #18	rps6kc1 (ENSAPOG00000003689) #17	ENSAPOG00000003736	SNX9 (ENSAPOG00000003851)	ENSAPOG00000003897	KCNK2 (ENSAPOG00000003936) #22	ENSAPOG00000003968	ABHD1 (ENSAPOG00000003982)	ctsbb (ENSAPOG00000004045)	fdft1 (ENSAPOG00000004074)	gata4 (ENSAPOG00000004084)
Bicolor damselfish	MODERN SPECIES	1564												rps6kc1 (ENSSPAG00000020695) #17	ENSSPAG00000020633	SNX9 (ENSSPAG00000020529)	ENSSPAG00000020487	kcnk2b (ENSSPAG00000020462) #22
Percomorphaceae_C	ANCESTRAL SPECIES	19	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000175851	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b
Eupercaria	ANCESTRAL SPECIES	16	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253
Tetraodontidae	ANCESTRAL SPECIES	15	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT01030000234555.a.b.f.a	ENSGT00940000156058	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00940000169582	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253	ENSGT00940000168254
Tetraodon	MODERN SPECIES	5	NHSL1 (ENSTNIG00000016388)	acbd3 (ENSTNIG00000016387)	mixl1 (ENSTNIG00000016386)	lin9 (ENSTNIG00000016385)	parp1 (ENSTNIG00000016384)	ENSTNIG00000016383	EFR3B (ENSTNIG00000016382)	ENSTNIG00000016381	PTPN14 (ENSTNIG00000016380) #20	smyd2b (ENSTNIG00000016379)	prox1a (ENSTNIG00000016378) #18	rps6kc1 (ENSTNIG00000016377) #17	ENSTNIG00000016376	SNX9 (ENSTNIG00000016375)	ENSTNIG00000016374	kcnk2b (ENSTNIG00000016373) #22	ENSTNIG00000016372	ABHD1 (ENSTNIG00000016371)	fdft1 (ENSTNIG00000016370)	gata4 (ENSTNIG00000016369)	NCOA7 (ENSTNIG00000016368)	ENSTNIG00000016367	ppp1r13bb (ENSTNIG00000016366)	daam1b (ENSTNIG00000016365)	kcnh5a (ENSTNIG00000016364)	SGPP1 (ENSTNIG00000016363)	abcd4 (ENSTNIG00000016362)	ENSTNIG00000016361	ENSTNIG00000016360	eif2b2 (ENSTNIG00000016359)	tmed10 (ENSTNIG00000016358)
Fugu	MODERN SPECIES	7	acbd3 (ENSTRUG00000014718)	mixl1 (ENSTRUG00000014706)	lin9 (ENSTRUG00000014637)	ENSTRUG00000014471	parp1 (ENSTRUG00000014490)	ENSTRUG00000031424	EFR3B (ENSTRUG00000014212)	ENSTRUG00000014199	PTPN14 (ENSTRUG00000014100) #20	smyd2b (ENSTRUG00000013934)	prox1a (ENSTRUG00000013890) #18	rps6kc1 (ENSTRUG00000013791) #17	ENSTRUG00000031803	SNX9 (ENSTRUG00000013436)	ENSTRUG00000013428	kcnk2b (ENSTRUG00000013276) #22	ENSTRUG00000012659	ABHD1 (ENSTRUG00000012547)	ctsbb (ENSTRUG00000012315)	fdft1 (ENSTRUG00000012217)	gata4 (ENSTRUG00000012112)	NCOA7 (ENSTRUG00000012001)	ENSTRUG00000025277	ENSTRUG00000011980	ppp1r13bb (ENSTRUG00000011779)	daam1b (ENSTRUG00000011584)	ENSTRUG00000011415	SGPP1 (ENSTRUG00000011371)	abcd4 (ENSTRUG00000011285)	ENSTRUG00000011086	ENSTRUG00000026930
Eupecaria_A	ANCESTRAL SPECIES	16	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253
Ballan wrasse	MODERN SPECIES	281	mixl1 (ENSLBEG00000013538)	lin9 (ENSLBEG00000013506)	ENSLBEG00000013489	ENSLBEG00000013470	parp1 (ENSLBEG00000013376)	ENSLBEG00000012976	EFR3B (ENSLBEG00000012761)	POMC (ENSLBEG00000012631)	PTPN14 (ENSLBEG00000012576) #20	smyd2b (ENSLBEG00000012530)	prox1a (ENSLBEG00000012512) #18	ENSLBEG00000012476	rps6kc1 (ENSLBEG00000012402) #17	SNX9 (ENSLBEG00000012148)	ENSLBEG00000012058	kcnk2b (ENSLBEG00000012028) #22	ENSLBEG00000011980	ABHD1 (ENSLBEG00000011941)	ctsbb (ENSLBEG00000011916)	fdft1 (ENSLBEG00000011877)	gata4 (ENSLBEG00000011847)	NCOA7 (ENSLBEG00000011818)	ENSLBEG00000011798	ENSLBEG00000011756	ppp1r13bb (ENSLBEG00000011620)	daam1b (ENSLBEG00000011322)	L3HYPDH (ENSLBEG00000011185)	kcnh5a (ENSLBEG00000011125)	SGPP1 (ENSLBEG00000011100)	abcd4 (ENSLBEG00000011018)	ENSLBEG00000010926
Eupecaria_B	ANCESTRAL SPECIES	16	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253
Eupecaria_C	ANCESTRAL SPECIES	16	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	11	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253
European seabass	MODERN SPECIES	7	acbd3 (ENSDLAG00005019380)	mixl1 (ENSDLAG00005019378)	lin9 (ENSDLAG00005019351)	ENSDLAG00005019347	parp1 (ENSDLAG00005016955)	ENSDLAG00005016701	ENSDLAG00005014876	ENSDLAG00005014915	PTPN14 (ENSDLAG00005014848) #20	ENSDLAG00005014736	ENSDLAG00005014708 #18	RPS6KC1 (ENSDLAG00005014671) #17	ENSDLAG00005014625	ENSDLAG00005013558	ENSDLAG00005028616	ENSDLAG00005013494 #22	ENSDLAG00005013383	ctsbb (ENSDLAG00005013196)	ENSDLAG00005013169	gata4 (ENSDLAG00005013161)	ENSDLAG00005012798	ENSDLAG00005029515	ENSDLAG00005012214	ENSDLAG00005012000	ENSDLAG00005011986	ENSDLAG00005031391	ENSDLAG00005011850	ENSDLAG00005034267	ENSDLAG00005011058	ENSDLAG00005021841	ENSDLAG00005016948
Large yellow croaker	MODERN SPECIES	482	mixl1 (ENSLCRG00005006191)	lin9 (ENSLCRG00005006194)	parp1 (ENSLCRG00005006264)	ENSLCRG00005006359	ENSLCRG00005006360	ENSLCRG00005006362	EFR3B (ENSLCRG00005006400)	POMC (ENSLCRG00005009467)	PTPN14 (ENSLCRG00005009468) #20	smyd2b (ENSLCRG00005009480)	prox1a (ENSLCRG00005009483) #18	rps6kc1 (ENSLCRG00005009484) #17	ENSLCRG00005009495	SNX9 (ENSLCRG00005009496)	ENSLCRG00005009510	kcnk2b (ENSLCRG00005009511) #22	ENSLCRG00005009512	ABHD1 (ENSLCRG00005009513)	ctsbb (ENSLCRG00005009524)	fdft1 (ENSLCRG00005009578)	gata4 (ENSLCRG00005009583)	NCOA7 (ENSLCRG00005009596)	si:dkey-25e12.3 (ENSLCRG00005010447)	ENSLCRG00005010449	ppp1r13bb (ENSLCRG00005010456)	daam1b (ENSLCRG00005011689)	L3HYPDH (ENSLCRG00005011845)	kcnh5a (ENSLCRG00005011847)	SGPP1 (ENSLCRG00005011873)	abcd4 (ENSLCRG00005011891)	ENSLCRG00005012750
Gilthead seabream	MODERN SPECIES	14	acbd3 (ENSSAUG00010020565)	mixl1 (ENSSAUG00010020566)	lin9 (ENSSAUG00010020567)	parp1 (ENSSAUG00010020592)	ENSSAUG00010020653	ENSSAUG00010020677	EFR3B (ENSSAUG00010021750)	POMC (ENSSAUG00010023137)	PTPN14 (ENSSAUG00010023138) #20	smyd2b (ENSSAUG00010023147)	prox1a (ENSSAUG00010023176) #18	rps6kc1 (ENSSAUG00010023181) #17	ENSSAUG00010023188	SNX9 (ENSSAUG00010023203)	ENSSAUG00010002790	kcnk2b (ENSSAUG00010002808) #22	ENSSAUG00010002831	ABHD1 (ENSSAUG00010002895)	ctsbb (ENSSAUG00010003083)	fdft1 (ENSSAUG00010003090)	gata4 (ENSSAUG00010003096)	NCOA7 (ENSSAUG00010003134)	ENSSAUG00010004528	ENSSAUG00010004531	ppp1r13bb (ENSSAUG00010004582)	daam1b (ENSSAUG00010006758)	L3HYPDH (ENSSAUG00010006928)	kcnh5a (ENSSAUG00010006956)	SGPP1 (ENSSAUG00010007715)	abcd4 (ENSSAUG00010007771)	ENSSAUG00010008793
Perciformes	ANCESTRAL SPECIES	14	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b
Perciformes_a	ANCESTRAL SPECIES	15	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b
Channel bull blenny	MODERN SPECIES	16	mixl1 (ENSCGOG00000017313)	lin9 (ENSCGOG00000017318)	parp1 (ENSCGOG00000017502)	ENSCGOG00000018540	ENSCGOG00000018541	ENSCGOG00000018542	EFR3B (ENSCGOG00000018559)	ENSCGOG00000019054	PTPN14 (ENSCGOG00000019064) #20	smyd2b (ENSCGOG00000019171)	prox1a (ENSCGOG00000009922) #18	rps6kc1 (ENSCGOG00000009926) #17	ENSCGOG00000009971	SNX9 (ENSCGOG00000009988)	ENSCGOG00000010582	kcnk2b (ENSCGOG00000010602) #22	ENSCGOG00000010605	ABHD1 (ENSCGOG00000010606)	ctsbb (ENSCGOG00000010609)	fdft1 (ENSCGOG00000010611)	gata4 (ENSCGOG00000010645)	NCOA7 (ENSCGOG00000010652)	ENSCGOG00000010738	ENSCGOG00000010745	ppp1r13bb (ENSCGOG00000010751)	ENSCGOG00000010907	daam1b (ENSCGOG00000010945)	ENSCGOG00000011111	KCNH5 (ENSCGOG00000011116)	SGPP1 (ENSCGOG00000011124)	abcd4 (ENSCGOG00000011151)
Pike perch	MODERN SPECIES	4	mixl1 (ENSSLUG00000024484)	lin9 (ENSSLUG00000024496)	parp1 (ENSSLUG00000024586)	ENSSLUG00000024611	ENSSLUG00000024613	ENSSLUG00000024618	EFR3B (ENSSLUG00000024646)	POMC (ENSSLUG00000024688)	PTPN14 (ENSSLUG00000024691) #20	smyd2b (ENSSLUG00000024711)	prox1a (ENSSLUG00000024753) #18	rps6kc1 (ENSSLUG00000024757) #17	ENSSLUG00000024761	SNX9 (ENSSLUG00000024777)	ENSSLUG00000024883	KCNK2 (ENSSLUG00000024884) #22	ENSSLUG00000024885	ABHD1 (ENSSLUG00000024886)	ctsbb (ENSSLUG00000024893)	fdft1 (ENSSLUG00000024901)	gata4 (ENSSLUG00000024907)	NCOA7 (ENSSLUG00000024913)	ENSSLUG00000024916	ENSSLUG00000024920	ppp1r13bb (ENSSLUG00000024949)	daam1b (ENSSLUG00000025047)	L3HYPDH (ENSSLUG00000025088)	ENSSLUG00000025091	SGPP1 (ENSSLUG00000025093)	abcd4 (ENSSLUG00000025106)	ENSSLUG00000025145
Cottioidei	ANCESTRAL SPECIES	23	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253
Lumpfish	MODERN SPECIES	16	acbd3 (ENSCLMG00005010932)	mixl1 (ENSCLMG00005010931)	lin9 (ENSCLMG00005010900)	ENSCLMG00005010896	parp1 (ENSCLMG00005010833)	ENSCLMG00005010816	EFR3B (ENSCLMG00005008070)	ENSCLMG00005008042	PTPN14 (ENSCLMG00005008040) #20	smyd2b (ENSCLMG00005008038)	prox1a (ENSCLMG00005008036) #18	rps6kc1 (ENSCLMG00005008035) #17	ENSCLMG00005008032	SNX9 (ENSCLMG00005007434)	ENSCLMG00005007418	kcnk2b (ENSCLMG00005020436) #22	ABHD1 (ENSCLMG00005020431)	ctsbb (ENSCLMG00005020430)	fdft1 (ENSCLMG00005020429)	gata4 (ENSCLMG00005020428)	NCOA7 (ENSCLMG00005020409)	ENSCLMG00005020408	ENSCLMG00005020407	ppp1r13bb (ENSCLMG00005019938)	ENSCLMG00005019926	daam1b (ENSCLMG00005019800)	L3HYPDH (ENSCLMG00005019792)	KCNH5 (ENSCLMG00005019791)	SGPP1 (ENSCLMG00005019790)	abcd4 (ENSCLMG00005019603)	ENSCLMG00005019594
Stickleback	MODERN SPECIES	18	DUSP10 (ENSGACG00000010062)	taf1a (ENSGACG00000010065)	ENSGACG00000010071	ENSGACG00000010074	ENSGACG00000010081	ENSGACG00000010084	EFR3B (ENSGACG00000010088)	POMC (ENSGACG00000010098)	PTPN14 (ENSGACG00000010112) #20	smyd2b (ENSGACG00000010127)	prox1a (ENSGACG00000010140) #18	rps6kc1 (ENSGACG00000010144) #17	ENSGACG00000010160	SNX9 (ENSGACG00000010171)	ENSGACG00000010188	kcnk2b (ENSGACG00000010191) #22	ENSGACG00000010204	ABHD1 (ENSGACG00000010221)	ctsbb (ENSGACG00000010234)	fdft1 (ENSGACG00000010266)	gata4 (ENSGACG00000010274)	NCOA7 (ENSGACG00000010278)	ENSGACG00000010284	ppp1r13bb (ENSGACG00000010288)	daam1b (ENSGACG00000010299)	L3HYPDH (ENSGACG00000010318)	kcnh5a (ENSGACG00000010336)	SGPP1 (ENSGACG00000010351)	abcd4 (ENSGACG00000010354)	ENSGACG00000010367	eif2b2 (ENSGACG00000010441)
Percomorphaceae_D	ANCESTRAL SPECIES	18	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000175851	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b
Carangaria	ANCESTRAL SPECIES	18	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000175851	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b
Carangaria_A	ANCESTRAL SPECIES	13	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000155141.x	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b
Seriola	ANCESTRAL SPECIES	4	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000155141.x	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00440000038430	ENSGT00940000159745	ENSGT01030000234625.B.d.c.b ##14	ENSGT00940000155747.g.b	ENSGT00940000153433.A.e
Greater amberjack	MODERN SPECIES	10	acbd3 (ENSSDUG00000016723)	mixl1 (ENSSDUG00000016720)	lin9 (ENSSDUG00000016699)	ENSSDUG00000016692	parp1 (ENSSDUG00000016626)	ENSSDUG00000016588	EFR3B (ENSSDUG00000016465)	POMC (ENSSDUG00000016440)	PTPN14 (ENSSDUG00000016356) #20	smyd2b (ENSSDUG00000016306)	prox1a (ENSSDUG00000016285) #18	rps6kc1 (ENSSDUG00000016207) #17	ENSSDUG00000016180	SNX9 (ENSSDUG00000016071)	ENSSDUG00000016046	kcnk2b (ENSSDUG00000016030) #22	ENSSDUG00000015999	ABHD1 (ENSSDUG00000015886)	ctsbb (ENSSDUG00000015853)	fdft1 (ENSSDUG00000015827)	gata4 (ENSSDUG00000015806)	ENSSDUG00000015796	ENSSDUG00000015755	ENSSDUG00000015730	ENSSDUG00000015696	ppp1r13bb (ENSSDUG00000015641)	zc3h14 (ENSSDUG00000015595)	batf (ENSSDUG00000015575)	FLVCR2 (ENSSDUG00000015509) ##14	TGFB3 (ENSSDUG00000015416)	esrrb (ENSSDUG00000015388)
Yellowtail amberjack	MODERN SPECIES	2275	acbd3 (ENSSLDG00000006241)	mixl1 (ENSSLDG00000006285)	lin9 (ENSSLDG00000006318)	parp1 (ENSSLDG00000006384)	ENSSLDG00000006468	ENSSLDG00000006486	EFR3B (ENSSLDG00000006520)	ENSSLDG00000006562	PTPN14 (ENSSLDG00000006578) #20	smyd2b (ENSSLDG00000006625)	prox1a (ENSSLDG00000006650) #18	rps6kc1 (ENSSLDG00000006680) #17	ENSSLDG00000006756	SNX9 (ENSSLDG00000006814)	ENSSLDG00000006930	kcnk2b (ENSSLDG00000006952) #22	ENSSLDG00000006984
Barramundi perch	MODERN SPECIES	162	ENSLCAG00010010025	parp1 (ENSLCAG00010009960)	ENSLCAG00010009744	EFR3B (ENSLCAG00010009430)	POMC (ENSLCAG00010009368)	ENSLCAG00010009362 #20	ENSLCAG00010009359 #20	ENSLCAG00010009357 #20	smyd2b (ENSLCAG00010009259)	prox1a (ENSLCAG00010009233) #18	rps6kc1 (ENSLCAG00010009230) #17	rps6kc1 (ENSLCAG00010009227) #17	ENSLCAG00010009222	SNX9 (ENSLCAG00010008944)	ENSLCAG00010008845	kcnk2b (ENSLCAG00010008840) #22	ENSLCAG00010008833	ABHD1 (ENSLCAG00010008827)	ctsbb (ENSLCAG00010008813)	fdft1 (ENSLCAG00010008793)	ENSLCAG00010008788	gata4 (ENSLCAG00010008778)	NCOA7 (ENSLCAG00010008775)	si:dkey-25e12.3 (ENSLCAG00010008769)	ENSLCAG00010008765	ppp1r13bb (ENSLCAG00010008755)	daam1b (ENSLCAG00010008688)	L3HYPDH (ENSLCAG00010008674)	KCNH5 (ENSLCAG00010008671)	SGPP1 (ENSLCAG00010008665)	abcd4 (ENSLCAG00010008552)
Pleuronectoidei	ANCESTRAL SPECIES	11	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000175851	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000165253
Tongue sole	MODERN SPECIES	17	acbd3 (ENSCSEG00000020688)	mixl1 (ENSCSEG00000020686)	lin9 (ENSCSEG00000020680)	parp1 (ENSCSEG00000020665)	ENSCSEG00000020660	ENSCSEG00000020658	EFR3B (ENSCSEG00000020649)	ENSCSEG00000020647	PTPN14 (ENSCSEG00000020643) #20	smyd2b (ENSCSEG00000020640)	prox1a (ENSCSEG00000020639) #18	rps6kc1 (ENSCSEG00000020571) #17	ENSCSEG00000020566	SNX9 (ENSCSEG00000020557)	ENSCSEG00000020554	kcnk2b (ENSCSEG00000020551) #22	ENSCSEG00000020550	ABHD1 (ENSCSEG00000020549)	ctsbb (ENSCSEG00000020545)	fdft1 (ENSCSEG00000020538)	gata4 (ENSCSEG00000020533)	ENSCSEG00000020531	ENSCSEG00000020528	si:dkey-25e12.3 (ENSCSEG00000020525)	ppp1r13bb (ENSCSEG00000020508)	daam1b (ENSCSEG00000020438)	kcnh5a (ENSCSEG00000020428)	SGPP1 (ENSCSEG00000020422)	batf (ENSCSEG00000020408)	FLVCR2 (ENSCSEG00000020397) ##14	TGFB3 (ENSCSEG00000020391)
Turbot	MODERN SPECIES	12	hebp2 (ENSSMAG00000024613)	ENSSMAG00000013936	acbd3 (ENSSMAG00000013907)	mixl1 (ENSSMAG00000013894)	lin9 (ENSSMAG00000013873)	parp1 (ENSSMAG00000013799)	ENSSMAG00000013339	ENSSMAG00000013293	ENSSMAG00000013286	PTPN14 (ENSSMAG00000013207) #20	ENSSMAG00000013183	ENSSMAG00000013176 #18	RPS6KC1 (ENSSMAG00000013161) #17	ENSSMAG00000013039	ENSSMAG00000012973	ENSSMAG00000012945 #22	ENSSMAG00000012915	ENSSMAG00000012908	ctsbb (ENSSMAG00000012842)	ENSSMAG00000012802	gata4 (ENSSMAG00000012793)	ENSSMAG00000012775	ENSSMAG00000012765	ENSSMAG00000012751	ENSSMAG00000012682	ENSSMAG00000012563	ENSSMAG00000012524	ENSSMAG00000012504	ENSSMAG00000012436	ENSSMAG00000012400	ENSSMAG00000012357
Anabantaria	ANCESTRAL SPECIES	20	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000157776.c.a
Zig-zag eel	MODERN SPECIES	16	ENSMAMG00000020693	acbd3 (ENSMAMG00000020682)	mixl1 (ENSMAMG00000020679)	lin9 (ENSMAMG00000020671)	ENSMAMG00000020667	parp1 (ENSMAMG00000020652)	ENSMAMG00000020634	ENSMAMG00000020630	PTPN14 (ENSMAMG00000020605) #20	ENSMAMG00000020596	ENSMAMG00000020589 #18	RPS6KC1 (ENSMAMG00000020585) #17	ENSMAMG00000020581	ENSMAMG00000025814	ENSMAMG00000020556	ENSMAMG00000020549 #22	ENSMAMG00000025008	ENSMAMG00000020534	ctsbb (ENSMAMG00000020531)	ENSMAMG00000020523	gata4 (ENSMAMG00000020506)	ENSMAMG00000020498	ENSMAMG00000020489	ENSMAMG00000020482	ENSMAMG00000020447	ENSMAMG00000018056	ENSMAMG00000017978	ENSMAMG00000017966	ENSMAMG00000017947	ENSMAMG00000017937	ENSMAMG00000017858
Anabantoidei	ANCESTRAL SPECIES	15	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00390000002143.b.a	ENSGT00390000016811.h	ENSGT00940000156874 #20	ENSGT00940000166832	ENSGT00940000154790.a.a.b #18	ENSGT00940000155656 #17	ENSGT00530000063085.A.a	ENSGT00940000156557.h	ENSGT00940000164041.b.a	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000153463.a.c.b	ENSGT00940000156452.a.a	ENSGT00390000002032	ENSGT00940000156540.b	ENSGT00940000158836.a.b	ENSGT00950000182955.a.a.b	ENSGT00940000157776.c.a
Siamese fighting fish	MODERN SPECIES	13	acbd3 (ENSBSLG00000021371)	mixl1 (ENSBSLG00000021303)	lin9 (ENSBSLG00000021111)	ENSBSLG00000020145	parp1 (ENSBSLG00000018953)	ENSBSLG00000018775	EFR3B (ENSBSLG00000017291)	ENSBSLG00000017191	PTPN14 (ENSBSLG00000017031) #20	smyd2b (ENSBSLG00000016749)	prox1a (ENSBSLG00000016632) #18	rps6kc1 (ENSBSLG00000015461) #17	ENSBSLG00000015369	SNX9 (ENSBSLG00000013570)	ENSBSLG00000013407	kcnk2b (ENSBSLG00000013371) #22	ENSBSLG00000013217	ABHD1 (ENSBSLG00000013108)	ctsbb (ENSBSLG00000011798)	fdft1 (ENSBSLG00000011660)	gata4 (ENSBSLG00000011585)	NCOA7 (ENSBSLG00000010837)	ENSBSLG00000010745	ENSBSLG00000010642	ppp1r13bb (ENSBSLG00000009560)	ENSBSLG00000009534	daam1b (ENSBSLG00000009464)	L3HYPDH (ENSBSLG00000009452)	kcnh5a (ENSBSLG00000009363)	SGPP1 (ENSBSLG00000009354)	abcd4 (ENSBSLG00000008462)
Climbing perch	MODERN SPECIES	15	mixl1 (ENSATEG00000010551)	lin9 (ENSATEG00000010544)	ENSATEG00000010529	parp1 (ENSATEG00000010457)	ENSATEG00000010288	ENSATEG00000010150	ENSATEG00000010127	PTPN14 (ENSATEG00000010022) #20	ENSATEG00000009976	ENSATEG00000009952 #18	RPS6KC1 (ENSATEG00000009883) #17	ENSATEG00000009814	ENSATEG00000027949	ENSATEG00000009787	ENSATEG00000009730	ENSATEG00000009677 #22	ENSATEG00000009586	ENSATEG00000009575	ctsbb (ENSATEG00000008504)	ENSATEG00000008409	gata4 (ENSATEG00000008328)	ENSATEG00000029505	ENSATEG00000008225	HINT3 (ENSATEG00000026864)	ENSATEG00000008155	ENSATEG00000027953	ENSATEG00000007294	ENSATEG00000007263	ENSATEG00000007202	ENSATEG00000007157	ENSATEG00000007206
Cod	MODERN SPECIES	13	stx11b.1 (ENSGMOG00000034977)	mthfd1l (ENSGMOG00000007486)	akap12b (ENSGMOG00000023204)	zbtb2b (ENSGMOG00000030464)	armt1 (ENSGMOG00000022447)	esr1 (ENSGMOG00000014898)	ENSGMOG00000036568	myct1a (ENSGMOG00000031525)	serac1 (ENSGMOG00000015267)	ENSGMOG00000028299	ENSGMOG00000013202	ENSGMOG00000036692	ENSGMOG00000033243	ENSGMOG00000013003	ENSGMOG00000013023	ENSGMOG00000018629 #22	ENSGMOG00000007087	ENSGMOG00000007103	ENSGMOG00000015219	hsp90aa1.1 (ENSGMOG00000015234)	hsp90aa1.2 (ENSGMOG00000015260)	ppp2r5cb (ENSGMOG00000015283)	ENSGMOG00000013114	atraid (ENSGMOG00000013100)	eif2b4 (ENSGMOG00000013084)	nme6 (ENSGMOG00000013072)	ENSGMOG00000013065	ENSGMOG00000024131	ptk2bb (ENSGMOG00000011174)	ENSGMOG00000011202	ENSGMOG00000011154
Protacanthopterygii	ANCESTRAL SPECIES	22	ENSGT00940000160412.a	ENSGT00950000182963.a.a.d	ENSGT00530000063651.a	ENSGT00940000162190	ENSGT00390000003188	ENSGT00940000156058	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00940000164041.b.a	ENSGT00940000156557.h	ENSGT00530000063085.A.a	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b #18	ENSGT00940000157082 #19	ENSGT00940000156874.n #20	ENSGT00940000156560.h #22	ENSGT00940000165510	ENSGT00950000182902.a.d	ENSGT00940000165866	ENSGT00940000163581.f.a	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000155141.w.a	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a
Salmoninae	ANCESTRAL SPECIES	56	ENSGT00940000160412.a	ENSGT00950000182963.a.a.d	ENSGT00530000063651.a.d	ENSGT00940000162190	ENSGT00390000003188.j	ENSGT00940000156058.g.a	ENSGT01030000234555.a.b.f.a	ENSGT00940000167206	ENSGT00940000164041.b.a	ENSGT00940000156557.h	ENSGT00530000063085.A.a.c	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b.e #18	ENSGT00940000157082 #19	ENSGT00940000156874.n.b.a #20	ENSGT00940000156560.h #22	ENSGT00940000165510.d	ENSGT00950000182902.a.d	ENSGT00940000165866.p.a.a.a	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000155141.w.a.h	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT01030000234912.d	ENSGT00940000157815.b	ENSGT00390000000358.z.b	ENSGT00650000094686	ENSGT00950000182982.C.c.b.j	ENSGT01050000244838.D.a.b.c
Huchen	MODERN SPECIES	1883												ENSHHUG00000021005	ENSHHUG00000021010	ENSHHUG00000021014	ENSHHUG00000021018 #20	kcnk2b (ENSHHUG00000021022) #22	ENSHHUG00000021023
Salmoninae_a	ANCESTRAL SPECIES	30	ENSGT00940000162166	ENSGT00940000160412.a	ENSGT00950000182963.a.a.d	ENSGT00530000063651.a.d	ENSGT00940000162190	ENSGT00390000003188.j	ENSGT00940000156058.g.a	ENSGT01030000234555.a.b.f.a	ENSGT00940000164041.b.a	ENSGT00940000156557.h	ENSGT00530000063085.A.a.c	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b.e #18	ENSGT00940000157082 #19	ENSGT00940000156874.n.b.a #20	ENSGT00940000156560.h #22	ENSGT00940000165510.d	ENSGT00950000182902.a.d	ENSGT00940000165866.o	ENSGT00940000165866.p.a.a.b	ENSGT00940000165866.p.a.a.a	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000155141.w.a.h	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT01030000234912.d	ENSGT00940000157815.b	ENSGT00390000000358.z.b	ENSGT00650000094686
Oncorhynchus	ANCESTRAL SPECIES	30	ENSGT00940000160412.a	ENSGT00950000182963.a.a.d	ENSGT00530000063651.a.d	ENSGT00940000162190	ENSGT00390000003188.j	ENSGT00940000156058.g.a	ENSGT01030000234555.a.b.f.a	ENSGT00390000016811.h	ENSGT00940000164041.b.a	ENSGT00940000156557.h	ENSGT00530000063085.A.a.c	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b.e #18	ENSGT00940000157082 #19	ENSGT00940000156874.n.b.a #20	ENSGT00940000156560.h #22	ENSGT00940000165510.d	ENSGT00950000182902.a.d	ENSGT00940000165866.p.a.a.b	ENSGT00940000165866.p.a.a.a	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000155141.w.a.h	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT01030000234912.d	ENSGT00940000157815.b	ENSGT00390000000358.z.b	ENSGT00650000094686	ENSGT00950000182982.C.c.b.j
Oncorhynchus_a	ANCESTRAL SPECIES	35	ENSGT00950000182963.a.a.d	ENSGT00530000063651.a.d	ENSGT00940000162190	ENSGT00390000003188.j	ENSGT00940000156058.g.a	ENSGT01030000234555.a.b.f.a	ENSGT00390000016811.h	ENSGT00940000164041.b.a	ENSGT00940000156557.h	ENSGT00530000063085.A.a.c	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b.e #18	ENSGT01010000229482	ENSGT00940000157082 #19	ENSGT00940000156874.n.b.a #20	ENSGT00940000156560.h #22	ENSGT00940000165510.d	ENSGT00950000182902.a.d	ENSGT00940000165866.p.a.a.a	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000155141.w.a.h	ENSGT00510000047616.a.b	ENSGT00940000153524.d.a.b	ENSGT00510000047616.a.a	ENSGT00940000157815.b	ENSGT00390000000358.z.b	ENSGT00650000094686	ENSGT00950000182982.C.c.b.j	ENSGT01050000244838.D.a.b.c
Coho salmon	MODERN SPECIES	13	acbd3 (ENSOKIG00005020270)	mixl1 (ENSOKIG00005020267)	lin9 (ENSOKIG00005020195)	ENSOKIG00005020186	parp1 (ENSOKIG00005019712)	EFR3B (ENSOKIG00005017133)	pomcb (ENSOKIG00005017014)	ENSOKIG00005017008	SNX9 (ENSOKIG00005016430)	ENSOKIG00005016382	rps6kc1 (ENSOKIG00005016337) #17	prox1a (ENSOKIG00005016323) #18	ENSOKIG00005016316	SMYD2 (ENSOKIG00005016190) #19	PTPN14 (ENSOKIG00005016154) #20	KCNK2 (ENSOKIG00005016144) #22	ENSOKIG00005016109	ABHD1 (ENSOKIG00005016020)	ctsbb (ENSOKIG00005015891)	fdft1 (ENSOKIG00005015873)	gata4 (ENSOKIG00005015867)	NCOA7 (ENSOKIG00005015822)	ENSOKIG00005015791	ENSOKIG00005015776	ENSOKIG00005015769	ENSOKIG00005015734	RSPO3 (ENSOKIG00005015725)	rnf146 (ENSOKIG00005015719)	ENSOKIG00005015711	SOGA3 (ENSOKIG00005015690)	elovl4b (ENSOKIG00005015680)
Chinook salmon	MODERN SPECIES	9	UTRN (ENSOTSG00005030358)	EPM2A (ENSOTSG00005030344)	ENSOTSG00005030322	ENSOTSG00005030149	fbxo30b (ENSOTSG00005030146)	GRM1 (ENSOTSG00005029581)	rab32a (ENSOTSG00005029580)	stxbp5a (ENSOTSG00005028844)	ENSOTSG00005028836	ENSOTSG00005028835	ASB2 (ENSOTSG00005028830)	SAMD5 (ENSOTSG00005028828)	ENSOTSG00005028827	SMYD2 (ENSOTSG00005028768) #19	PTPN14 (ENSOTSG00005028766) #20	kcnk2b (ENSOTSG00005028765) #22	ENSOTSG00005028764	ENSOTSG00005028763	ABHD1 (ENSOTSG00005028419)	ENSOTSG00005028417	ctsbb (ENSOTSG00005028058)	fdft1 (ENSOTSG00005028057)	gata4 (ENSOTSG00005028056)	ENSOTSG00005028055	ENSOTSG00005028054	ENSOTSG00005027965	ENSOTSG00005027961	ENSOTSG00005027959	RSPO3 (ENSOTSG00005027958)	rnf146 (ENSOTSG00005027956)	SOGA3 (ENSOTSG00005027954)
Rainbow trout	MODERN SPECIES	25	ENSOMYG00000024267	parp1 (ENSOMYG00000023952)	ENSOMYG00000069636	ENSOMYG00000060176	ENSOMYG00000025023	pomcb (ENSOMYG00000027563)	ENSOMYG00000076836	ENSOMYG00000050139	ENSOMYG00000027905	ENSOMYG00000029111	RPS6KC1 (ENSOMYG00000029129) #17	ENSOMYG00000029151	PROX1 (ENSOMYG00000029170) #18	SMYD2 (ENSOMYG00000019127) #19	PTPN14 (ENSOMYG00000019113) #20	KCNK2 (ENSOMYG00000019093) #22	ENSOMYG00000019083	ENSOMYG00000018842	ENSOMYG00000018790	ENSOMYG00000018767	ctsbb (ENSOMYG00000018692)	ENSOMYG00000018653	ENSOMYG00000054609	ENSOMYG00000057473	gata4 (ENSOMYG00000018611)	ENSOMYG00000018498	ENSOMYG00000018474	ENSOMYG00000018448	ENSOMYG00000018411	ENSOMYG00000018392	RSPO3 (ENSOMYG00000018367)
Salmo	ANCESTRAL SPECIES	12	ENSGT00940000160412.a	ENSGT00950000182963.a.a.d	ENSGT00530000063651.a.d	ENSGT00940000162190	ENSGT00390000003188.j	ENSGT00940000156058.g.a	ENSGT01030000234555.a.b.f.a	ENSGT00390000016811.h	ENSGT00940000164041.b.a	ENSGT00940000156557.h	ENSGT00530000063085.A.a.c	ENSGT00940000155656 #17	ENSGT00940000154790.a.a.b.e #18	ENSGT00940000157082 #19	ENSGT00940000156874.n.b.a #20	ENSGT00940000156560.h #22	ENSGT00940000165510.d	ENSGT00950000182902.a.d	ENSGT00940000165866.o	ENSGT00940000165866.p.a.a.b	ENSGT00940000165866.p.a.a.a	ENSGT00940000166128	ENSGT00390000016034	ENSGT00940000158349	ENSGT00940000155141.w.a.h	ENSGT00510000047616.a.b	ENSGT00510000047616.a.a	ENSGT00940000157815.b	ENSGT00390000000358.z.b	ENSGT00650000094686	ENSGT00950000182982.C.c.b.j
River trout	MODERN SPECIES		NHSL1 (ENSSTUG00000026506)	acbd3 (ENSSTUG00000026572)	mixl1 (ENSSTUG00000026624)	lin9 (ENSSTUG00000026632)	parp1 (ENSSTUG00000026695)	ENSSTUG00000027108	EFR3B (ENSSTUG00000027175)	pomcb (ENSSTUG00000029036)	ENSSTUG00000000055	SNX9 (ENSSTUG00000000101)	ENSSTUG00000000720	rps6kc1 (ENSSTUG00000000729) #17	prox1a (ENSSTUG00000000736) #18	SMYD2 (ENSSTUG00000000746) #19	PTPN14 (ENSSTUG00000000773) #20	kcnk2b (ENSSTUG00000000783) #22	ENSSTUG00000000788	ABHD1 (ENSSTUG00000000794)	ENSSTUG00000000817	ENSSTUG00000000833	ctsbb (ENSSTUG00000000855)	fdft1 (ENSSTUG00000000941)	gata4 (ENSSTUG00000000954)	NCOA7 (ENSSTUG00000000961)	ENSSTUG00000000977	ENSSTUG00000000984	ENSSTUG00000000994	RSPO3 (ENSSTUG00000000995)	rnf146 (ENSSTUG00000000996)	ENSSTUG00000000997	SOGA3 (ENSSTUG00000001001)
Atlantic salmon	MODERN SPECIES	25	ENSSSAG00000097334	ENSSSAG00000043145	acbd3 (ENSSSAG00000104054)	mixl1 (ENSSSAG00000043253)	lin9 (ENSSSAG00000043294)	ENSSSAG00000052881	parp1 (ENSSSAG00000043582)	ENSSSAG00000052938	ENSSSAG00000053140	ENSSSAG00000053430	ENSSSAG00000061632	RPS6KC1 (ENSSSAG00000008200) #17	PROX1 (ENSSSAG00000008215) #18	smyd2 (ENSSSAG00000008118) #19	PTPN14 (ENSSSAG00000105131) #20	KCNK2 (ENSSSAG00000008039) #22	ENSSSAG00000084223	ENSSSAG00000007980	ENSSSAG00000102925	ENSSSAG00000094846	ctsb (ENSSSAG00000007868)	fdft1 (ENSSSAG00000007833)	gata4 (ENSSSAG00000007823)	ENSSSAG00000101655	ENSSSAG00000108652	hint3 (ENSSSAG00000007801)	ENSSSAG00000089147	RSPO3 (ENSSSAG00000097178)	rnf146 (ENSSSAG00000007769)	SOGA3 (ENSSSAG00000007742)	elovl4 (ENSSSAG00000007669)
Spotted gar	MODERN SPECIES	239																kcnk2b (ENSLOCG00000000545) #22	ENSLOCG00000000653	ENSLOCG00000000687	ABHD1 (ENSLOCG00000000740)	ctsba (ENSLOCG00000000768)	fdft1 (ENSLOCG00000000791)	gata4 (ENSLOCG00000000817)	xkr5a (ENSLOCG00000000839)	tram2 (ENSLOCG00000000868)	efhc1 (ENSLOCG00000000899)	h3f3c (ENSLOCG00000000915)	ENSLOCG00000000948	mrpl19 (ENSLOCG00000000969)	gcfc2 (ENSLOCG00000001009)	itsn2b (ENSLOCG00000001031)	ENSLOCG00000001077
Reedfish	MODERN SPECIES	6	nenf (ENSECRG00000014763) #7	atf3 (ENSECRG00000014748) #8	batf3 (ENSECRG00000014732) #10	NSL1 (ENSECRG00000014702) #11	TATDN3 (ENSECRG00000014664)	tatdn3 (ENSECRG00000014581)	ENSECRG00000014549	flvcr1 (ENSECRG00000014534) #14	VASH2 (ENSECRG00000014477) #15	angel2 (ENSECRG00000014385) #16	rps6kc1 (ENSECRG00000014298) #17	ENSECRG00000014262 ##18	smyd2a (ENSECRG00000014114) #19	PTPN14 (ENSECRG00000014069) #20	CENPF (ENSECRG00000013988) ##21	kcnk2b (ENSECRG00000013744) #22	KCTD3 (ENSECRG00000013663) #23	esrrga (ENSECRG00000013623)	spata17 (ENSECRG00000013607)	TCTE1 (ENSECRG00000013587)	extl3 (ENSECRG00000013569)	ENSECRG00000013556	ppm1g (ENSECRG00000013535)	rrp15 (ENSECRG00000013510)	plek (ENSECRG00000013475)