Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000157808 #22
Gnathostomata	ANCESTRAL SPECIES																	ENSGT00940000157808 #22
Euteleostomi	ANCESTRAL SPECIES	882															ENSGT00940000160783 #23	ENSGT00940000157808 #22	ENSGT00390000005763 #21
Sarcopterygii	ANCESTRAL SPECIES	289										ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00940000160978 #27	ENSGT00390000001141 #25	ENSGT00940000160062 #24	ENSGT00940000160783 #23	ENSGT00940000157808 #22	ENSGT00390000005763 #21	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00940000153649.B	ENSGT00940000175075	ENSGT00390000014495	ENSGT00520000055620.A
Tetrapoda	ANCESTRAL SPECIES	101					ENSGT00940000153130	ENSGT00940000153073	ENSGT00950000182968	ENSGT00940000160147	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00940000160978 #27	ENSGT00390000001141 #25	ENSGT00940000162546	ENSGT00940000160062 #24	ENSGT00940000160783 #23	ENSGT00940000157808 #22	ENSGT00390000005763 #21	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00910000147451	ENSGT00550000075058	ENSGT00940000154888	ENSGT00940000153886.a.a	ENSGT00940000153649.B	ENSGT00390000014495	ENSGT00520000055620.A	ENSGT00390000018123.a.b	ENSGT00940000159445	ENSGT00940000160206	ENSGT00940000161519	ENSGT00390000000337
Amniota	ANCESTRAL SPECIES	37	ENSGT00950000182893.a.b	ENSGT00740000115581.e	ENSGT00940000158278 #37	ENSGT00940000161681 #36	ENSGT00390000007438 #35	ENSGT00710000106790 #34	ENSGT00940000159567 #31	ENSGT00940000162200 #30	ENSGT00940000157841 #29	ENSGT00390000012708 #28	ENSGT00390000014634 #26	ENSGT00390000001141 #25	ENSGT00940000162546	ENSGT00940000160062 #24	ENSGT00940000160783 #23	ENSGT00940000157808 #22	ENSGT00390000005763 #21	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT01090000260011.B #18	ENSGT00390000016277.b #17	ENSGT00390000003324 #16	ENSGT00940000160147	ENSGT00940000163058	ENSGT00940000163275	ENSGT00940000162245	ENSGT00550000075058	ENSGT00940000154888	ENSGT00940000153886.a.a	ENSGT00940000153649.B	ENSGT00390000014495
Mammalia	ANCESTRAL SPECIES	55	ENSGT00940000154888	ENSGT00550000075058	ENSGT00940000162245	ENSGT01050000244869.a.b	ENSGT00940000163275	ENSGT00940000163058	ENSGT00940000163052	ENSGT00940000153073	ENSGT00940000154455	ENSGT00940000160147	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000161681 #36	ENSGT00940000158278 #37	ENSGT00740000115581.e
Theria	ANCESTRAL SPECIES	24	ENSGT00940000163502	ENSGT00940000153073.a	ENSGT00940000153130.a.a.b	ENSGT00940000153073.b.b.b	ENSGT00940000163052	ENSGT01030000235488	ENSGT00730000111639	ENSGT00940000160147.b	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260086.A.c.a.b	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000161681 #36	ENSGT00940000158278 #37	ENSGT00740000115581.e
Eutheria	ANCESTRAL SPECIES	8	ENSGT00940000163052	ENSGT00940000162998.b	ENSGT00940000153073.b.b.b.a	ENSGT00940000154455.a.b	ENSGT00940000154455.a.a	ENSGT00940000163906	ENSGT00730000111639	ENSGT00940000160147.b	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260086.A.c.a.b	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Boreoeutheria	ANCESTRAL SPECIES	3	ENSGT00940000160147.a	ENSGT00940000163224.a	ENSGT00900000140957.B	ENSGT00940000164778	ENSGT00940000165951	ENSGT00550000075201	ENSGT00730000111639	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260086.A.c.a.b	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Euarchontoglires	ANCESTRAL SPECIES	3	ENSGT00940000160147.a	ENSGT00940000163224.a	ENSGT00900000140957.B	ENSGT00550000075201	ENSGT00730000111639	ENSGT00940000164554 #15	ENSGT00940000160147.b	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00910000148211	ENSGT01090000260086.A.c.a.b	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Euarchontoglires_A	ANCESTRAL SPECIES	3	ENSGT00940000162840.C	ENSGT00940000166072	ENSGT00940000160147.a	ENSGT00940000163224.a	ENSGT00900000140957.B	ENSGT00550000075201	ENSGT00730000111639	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00910000148211	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Glires	ANCESTRAL SPECIES	12	ENSGT00940000162840.C	ENSGT00940000166072	ENSGT00940000160147.a	ENSGT00940000163224.a	ENSGT00900000140957.B	ENSGT00550000075201	ENSGT00730000111639	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00910000148211	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Rodentia	ANCESTRAL SPECIES	3	ENSGT00940000162840.C	ENSGT00940000166072	ENSGT00940000160147.a	ENSGT00940000163224.a	ENSGT00940000164778	ENSGT00550000075201	ENSGT00730000111639	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00910000148211	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Rodentia_B	ANCESTRAL SPECIES	7	ENSGT00940000162524.A	ENSGT00940000162840.C	ENSGT00940000166072	ENSGT00940000160147.a	ENSGT00940000163224.a	ENSGT00940000164778	ENSGT00550000075201	ENSGT00730000111639	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Myomorpha	ANCESTRAL SPECIES	7	ENSGT00940000153130.a.a.a.c.b	ENSGT00940000162524.A	ENSGT00940000162840.C	ENSGT00940000166072	ENSGT00940000160147.a	ENSGT00940000163224.a	ENSGT00940000164778	ENSGT00550000075201	ENSGT00730000111639	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37	ENSGT00740000115581.e
Muroidea	ANCESTRAL SPECIES	36	ENSGT00940000153130.a.a.a.c.b	ENSGT00940000162524.A	ENSGT00940000162840.C	ENSGT00940000166072	ENSGT00940000160147.a	ENSGT00940000163224.a	ENSGT00940000164778	ENSGT00550000075201	ENSGT00730000111639	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37	ENSGT00740000115581.e
Muroidea_A	ANCESTRAL SPECIES	10	ENSGT00940000162524.A	ENSGT00940000162840.C	ENSGT00940000166072	ENSGT00940000160147.a	ENSGT00940000163224.a	ENSGT00940000164778	ENSGT00550000075201	ENSGT00730000111639	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00950000183634 #33	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Murinae	ANCESTRAL SPECIES	16	ENSGT00940000162524.A	ENSGT00940000162840.C	ENSGT00940000166072	ENSGT00940000160147.a	ENSGT00940000163224.a	ENSGT00940000164778	ENSGT00550000075201	ENSGT00730000111639	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00950000183634 #33	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Mus	ANCESTRAL SPECIES	8	ENSGT00940000163224.a	ENSGT00550000075201	ENSGT00730000111639	ENSGT00950000186478	ENSGT00950000186467	ENSGT00860000136119	ENSGT00950000186557	ENSGT00860000135794	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00860000136194 #32	ENSGT00950000183634 #33	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36
Mus_A	ANCESTRAL SPECIES	12	ENSGT00950000186473 #7	ENSGT00950000186517 #8	ENSGT00950000186527 #9	ENSGT00860000135743 #10	ENSGT00950000186533 #11	ENSGT00860000135941 #12	ENSGT00860000135984 #13	ENSGT00860000135636 #14	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00860000136194 #32	ENSGT00950000183634 #33	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36
Mus_B	ANCESTRAL SPECIES	11	ENSGT00950000186473 #7	ENSGT00950000186517 #8	ENSGT00950000186527 #9	ENSGT00860000135743 #10	ENSGT00950000186533 #11	ENSGT00860000135941 #12	ENSGT00860000135984 #13	ENSGT00860000135636 #14	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00950000183634 #33	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Mus_C	ANCESTRAL SPECIES	20	ENSGT00950000186517 #8	ENSGT00950000186527 #9	ENSGT00860000135743 #10	ENSGT00950000186533 #11	ENSGT00860000135941 #12	ENSGT00860000135984 #13	ENSGT00860000135636 #14	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00910000148211	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00950000183634 #33	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
spretus	MODERN SPECIES	5	Traj11 (MGP_SPRETEiJ_G0002300) #7	Traj9 (MGP_SPRETEiJ_G0002301) #8	Traj7 (MGP_SPRETEiJ_G0002302) #9	Traj6 (MGP_SPRETEiJ_G0002303) #10	Traj5 (MGP_SPRETEiJ_G0002304) #11	Traj4 (MGP_SPRETEiJ_G0002305) #12	Traj3 (MGP_SPRETEiJ_G0002306) #13	Traj2 (MGP_SPRETEiJ_G0002307) #14	Trac (MGP_SPRETEiJ_G0002246) #15	Dad1 (MGP_SPRETEiJ_G0020139) #16	Abhd4 (MGP_SPRETEiJ_G0020140) #17	Or6e1 (MGP_SPRETEiJ_G0020141) #18	Oxa1l (MGP_SPRETEiJ_G0020142) #19	Slc7a7 (MGP_SPRETEiJ_G0020143) #20	Mrpl52 (MGP_SPRETEiJ_G0020144) #21	Mmp14 (MGP_SPRETEiJ_G0020145) #22	Lrp10 (MGP_SPRETEiJ_G0020146) #23	Rem2 (MGP_SPRETEiJ_G0020147) #24	Prmt5 (MGP_SPRETEiJ_G0020148) #25	Haus4 (MGP_SPRETEiJ_G0020149) #26	Ajuba (MGP_SPRETEiJ_G0020150) #27	4931414P19Rik (MGP_SPRETEiJ_G0020151) #28	Psmb5 (MGP_SPRETEiJ_G0020152) #29	Psmb11 (MGP_SPRETEiJ_G0020153) #30	Cdh24 (MGP_SPRETEiJ_G0020154) #31	MGP_SPRETEiJ_G0020155 #32	MGP_SPRETEiJ_G0020156 #33	Acin1 (MGP_SPRETEiJ_G0020157) #34	1700123O20Rik (MGP_SPRETEiJ_G0020158) #35	Cebpe (MGP_SPRETEiJ_G0020159) #36	Slc7a8 (MGP_SPRETEiJ_G0020160) #37
Steppe mouse	MODERN SPECIES	2984		ENSMSIG00000016011	ENSMSIG00000016039	ENSMSIG00000016053	ENSMSIG00000016066	Trdc (ENSMSIG00000016073)	ENSMSIG00000016075	Trac (ENSMSIG00000016077) #15	Dad1 (ENSMSIG00000016087) #16	Abhd4 (ENSMSIG00000016112) #17	ENSMSIG00000016133	Or6e1 (ENSMSIG00000016138) #18	Oxa1l (ENSMSIG00000016147) #19	Slc7a7 (ENSMSIG00000016170) #20	ENSMSIG00000016189 #21	Mmp14 (ENSMSIG00000016218) #22	Lrp10 (ENSMSIG00000016275) #23	Rem2 (ENSMSIG00000016298) #24	Prmt5 (ENSMSIG00000016312) #25	Haus4 (ENSMSIG00000016328) #26	Ajuba (ENSMSIG00000016353) #27	4931414P19Rik (ENSMSIG00000016385) #28	Psmb5 (ENSMSIG00000016401) #29	Psmb11 (ENSMSIG00000016415) #30	Cdh24 (ENSMSIG00000016419) #31	ENSMSIG00000016433 #33	Acin1 (ENSMSIG00000016452) #34	ENSMSIG00000016836 #35	Cirop (ENSMSIG00000016852)	Cebpe (ENSMSIG00000016907) #36	Slc7a8 (ENSMSIG00000016920) #37
Mouse	MODERN SPECIES	5	Traj11 (ENSMUSG00000076918) #7	Traj9 (ENSMUSG00000076919) #8	Traj7 (ENSMUSG00000076921) #9	Traj6 (ENSMUSG00000076922) #10	Traj5 (ENSMUSG00000076923) #11	Traj4 (ENSMUSG00000076924) #12	Traj3 (ENSMUSG00000076925) #13	Traj2 (ENSMUSG00000076926) #14	Trac (ENSMUSG00000076928) #15	Dad1 (ENSMUSG00000022174) #16	Abhd4 (ENSMUSG00000040997) #17	Or6e1 (ENSMUSG00000048153) #18	Oxa1l (ENSMUSG00000000959) #19	Slc7a7 (ENSMUSG00000000958) #20	Mrpl52 (ENSMUSG00000010406) #21	Mmp14 (ENSMUSG00000000957) #22	Lrp10 (ENSMUSG00000022175) #23	Rem2 (ENSMUSG00000022176) #24	Prmt5 (ENSMUSG00000023110) #25	Haus4 (ENSMUSG00000022177) #26	Ajuba (ENSMUSG00000022178) #27	4931414P19Rik (ENSMUSG00000022179) #28	Psmb5 (ENSMUSG00000022193) #29	Psmb11 (ENSMUSG00000072423) #30	Cdh24 (ENSMUSG00000059674) #31	Acin1 (ENSMUSG00000022185) #34	1700123O20Rik (ENSMUSG00000040822) #35	Cirop (ENSMUSG00000114865)	Cebpe (ENSMUSG00000052435) #36	Slc7a8 (ENSMUSG00000022180) #37	Rnf212b (ENSMUSG00000112858)
Ryukyu mouse	MODERN SPECIES	5	Traj11 (MGP_CAROLIEiJ_G0002171) #7	Traj9 (MGP_CAROLIEiJ_G0002172) #8	Traj7 (MGP_CAROLIEiJ_G0002173) #9	Traj6 (MGP_CAROLIEiJ_G0002174) #10	Traj5 (MGP_CAROLIEiJ_G0002175) #11	Traj4 (MGP_CAROLIEiJ_G0002176) #12	Traj3 (MGP_CAROLIEiJ_G0002177) #13	Traj2 (MGP_CAROLIEiJ_G0002178) #14	Trac (MGP_CAROLIEiJ_G0002120) #15	Dad1 (MGP_CAROLIEiJ_G0019249) #16	Abhd4 (MGP_CAROLIEiJ_G0019250) #17	Or6e1 (MGP_CAROLIEiJ_G0019251) #18	Oxa1l (MGP_CAROLIEiJ_G0019252) #19	Slc7a7 (MGP_CAROLIEiJ_G0019253) #20	Mrpl52 (MGP_CAROLIEiJ_G0019254) #21	Mmp14 (MGP_CAROLIEiJ_G0019255) #22	Lrp10 (MGP_CAROLIEiJ_G0019256) #23	Rem2 (MGP_CAROLIEiJ_G0019257) #24	Prmt5 (MGP_CAROLIEiJ_G0019258) #25	Haus4 (MGP_CAROLIEiJ_G0019259) #26	Ajuba (MGP_CAROLIEiJ_G0019260) #27	4931414P19Rik (MGP_CAROLIEiJ_G0019261) #28	Psmb5 (MGP_CAROLIEiJ_G0019262) #29	Psmb11 (MGP_CAROLIEiJ_G0019263) #30	Cdh24 (MGP_CAROLIEiJ_G0019264) #31	MGP_CAROLIEiJ_G0019265 #32	MGP_CAROLIEiJ_G0019266 #33	Acin1 (MGP_CAROLIEiJ_G0019267) #34	1700123O20Rik (MGP_CAROLIEiJ_G0019268) #35	Cebpe (MGP_CAROLIEiJ_G0019269) #36	Slc7a8 (MGP_CAROLIEiJ_G0019270) #37
Shrew mouse	MODERN SPECIES	21	Traj11 (MGP_PahariEiJ_G0002021) #7	MGP_PahariEiJ_G0002022 #8	MGP_PahariEiJ_G0002023 #9	Traj6 (MGP_PahariEiJ_G0002024) #10	Traj5 (MGP_PahariEiJ_G0002025) #11	Traj4 (MGP_PahariEiJ_G0002026) #12	Traj3 (MGP_PahariEiJ_G0002027) #13	Traj2 (MGP_PahariEiJ_G0002028) #14	Trac (MGP_PahariEiJ_G0001958) #15	Dad1 (MGP_PahariEiJ_G0030268) #16	Abhd4 (MGP_PahariEiJ_G0030269) #17	Or6e1 (MGP_PahariEiJ_G0030270) #18	Oxa1l (MGP_PahariEiJ_G0030271) #19	MGP_PahariEiJ_G0030272 #20	Mrpl52 (MGP_PahariEiJ_G0030273) #21	Mmp14 (MGP_PahariEiJ_G0030274) #22	Lrp10 (MGP_PahariEiJ_G0030275) #23	Rem2 (MGP_PahariEiJ_G0030276) #24	Prmt5 (MGP_PahariEiJ_G0030277) #25	Haus4 (MGP_PahariEiJ_G0030278) #26	Ajuba (MGP_PahariEiJ_G0030279) #27	4931414P19Rik (MGP_PahariEiJ_G0030280) #28	Psmb5 (MGP_PahariEiJ_G0030281) #29	Psmb11 (MGP_PahariEiJ_G0030282) #30	Cdh24 (MGP_PahariEiJ_G0030283) #31	MGP_PahariEiJ_G0030284 #32	MGP_PahariEiJ_G0030285 #33	Acin1 (MGP_PahariEiJ_G0030286) #34	1700123O20Rik (MGP_PahariEiJ_G0030287) #35	Cebpe (MGP_PahariEiJ_G0030288) #36	Slc7a8 (MGP_PahariEiJ_G0030289) #37
Rat	MODERN SPECIES	6	LOC120096971 (ENSRNOG00000042103)	ENSRNOG00000065769	Trav21-dv12 (ENSRNOG00000065401)	LOC108353026 (ENSRNOG00000068621)	ENSRNOG00000065420	ENSRNOG00000066946	ENSRNOG00000065679	AC097037.1 (ENSRNOG00000033109)	ENSRNOG00000067178	ENSRNOG00000070834	Dad1 (ENSRNOG00000009090) #16	Abhd4 (ENSRNOG00000009244) #17	Or6e1 (ENSRNOG00000068252) #18	Oxa1l (ENSRNOG00000009713) #19	Slc7a7 (ENSRNOG00000010296) #20	Mmp14 (ENSRNOG00000010947) #22	Lrp10 (ENSRNOG00000011592) #23	Rem2 (ENSRNOG00000011646) #24	Prmt5 (ENSRNOG00000012046) #25	Haus4 (ENSRNOG00000039284) #26	Ajuba (ENSRNOG00000012791) #27	RGD1565222 (ENSRNOG00000013317) #28	Psmb5 (ENSRNOG00000013386) #29	Cdh24 (ENSRNOG00000013503) #31	Gm17606 (ENSRNOG00000065567) #33	Acin1 (ENSRNOG00000013533) #34	C15h14orf119 (ENSRNOG00000029146) #35	Cirop (ENSRNOG00000057827)	Cebpe (ENSRNOG00000014282) #36	Slc7a8 (ENSRNOG00000014311) #37	Rnf212b (ENSRNOG00000066673)
Cricetidae	ANCESTRAL SPECIES	15	ENSGT00550000075058	ENSGT00940000162245	ENSGT01050000244869.a.b.b	ENSGT01050000244869.a.b.a.o	ENSGT01050000244869.a.b.a.p	ENSGT00940000163275	ENSGT00940000163058	ENSGT01020000232693	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00950000183634 #33	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Cricetinae	ANCESTRAL SPECIES	18										ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000161681 #36	ENSGT00940000158278 #37	ENSGT00950000182893.a.b	ENSGT00940000161906
Golden Hamster	MODERN SPECIES	811												Dad1 (ENSMAUG00000001827) #16	Oxa1l (ENSMAUG00000005100) #19	Slc7a7 (ENSMAUG00000005323) #20	Mrpl52 (ENSMAUG00000000585) #21	Mmp14 (ENSMAUG00000018577) #22	Lrp10 (ENSMAUG00000013461) #23	Rem2 (ENSMAUG00000021314) #24	Ajuba (ENSMAUG00000014919) #27	4931414P19Rik (ENSMAUG00000013152) #28	ENSMAUG00000017591 #29	ENSMAUG00000014813	Psmb11 (ENSMAUG00000017123) #30	Cdh24 (ENSMAUG00000021615) #31	ENSMAUG00000012369 #32	Acin1 (ENSMAUG00000000504) #34	Slc7a8 (ENSMAUG00000019384) #37	Homez (ENSMAUG00000001159)	Ppp1r3e (ENSMAUG00000012375)	ENSMAUG00000007383	Slc22a17 (ENSMAUG00000012724)
Chinese hamster chok1gshd	MODERN SPECIES	3										ENSCGRG00001018967 #16	Abhd4 (ENSCGRG00001022057) #17	Or6e1 (ENSCGRG00001005325) #18	Oxa1l (ENSCGRG00001023578) #19	Slc7a7 (ENSCGRG00001021388) #20	Mrpl52 (ENSCGRG00001009095) #21	Mmp14 (ENSCGRG00001015766) #22	Lrp10 (ENSCGRG00001009012) #23	Rem2 (ENSCGRG00001003504) #24	Prmt5 (ENSCGRG00001014293) #25	Haus4 (ENSCGRG00001024703) #26	ENSCGRG00001005166	Ajuba (ENSCGRG00001014156) #27	4931414P19Rik (ENSCGRG00001001465) #28	Psmb5 (ENSCGRG00001016436) #29	Psmb11 (ENSCGRG00001002129) #30	Cdh24 (ENSCGRG00001006509) #31	Acin1 (ENSCGRG00001010945) #34	1700123O20Rik (ENSCGRG00001008601) #35	Cebpe (ENSCGRG00001017216) #36	Slc7a8 (ENSCGRG00001010833) #37	Homez (ENSCGRG00001016326)
Cricetidae_B	ANCESTRAL SPECIES	11	ENSGT00550000075058	ENSGT00940000162245	ENSGT01050000244869.a.b.b	ENSGT01050000244869.a.b.a.o	ENSGT01050000244869.a.b.a.p	ENSGT00940000163275	ENSGT00940000163058	ENSGT01020000232693	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00950000183634 #33	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Prairie vole	MODERN SPECIES	163								Dad1 (ENSMOCG00000020248) #16	Abhd4 (ENSMOCG00000021742) #17	ENSMOCG00000001745	Or6e1 (ENSMOCG00000003935) #18	ENSMOCG00000005060	Oxa1l (ENSMOCG00000013102) #19	Slc7a7 (ENSMOCG00000000960) #20	ENSMOCG00000016920 #21	Mmp14 (ENSMOCG00000006065) #22	Lrp10 (ENSMOCG00000006687) #23	Rem2 (ENSMOCG00000000581) #24	Prmt5 (ENSMOCG00000017320) #25	Haus4 (ENSMOCG00000005352) #26	Ajuba (ENSMOCG00000014127) #27	4931414P19Rik (ENSMOCG00000012978) #28	ENSMOCG00000015141 #29	Cdh24 (ENSMOCG00000012608) #31	ENSMOCG00000007461	ENSMOCG00000006934 #34	ENSMOCG00000001801	ENSMOCG00000016935 #34	1700123O20Rik (ENSMOCG00000001450) #35	Cebpe (ENSMOCG00000007425) #36	Slc7a8 (ENSMOCG00000017595) #37
Northern American deer mouse	MODERN SPECIES	22	ENSPEMG00000029205	Trav19 (ENSPEMG00000029181)	Trav21-dv12 (ENSPEMG00000026566)	ENSPEMG00000024488	ENSPEMG00000025126	ENSPEMG00000029710	ENSPEMG00000028337	ENSPEMG00000028259	Trac (ENSPEMG00000025944) #15	Dad1 (ENSPEMG00000009539) #16	Abhd4 (ENSPEMG00000003226) #17	Or6e1 (ENSPEMG00000004435) #18	Oxa1l (ENSPEMG00000016711) #19	Slc7a7 (ENSPEMG00000016955) #20	Mrpl52 (ENSPEMG00000010147) #21	Mmp14 (ENSPEMG00000014840) #22	Lrp10 (ENSPEMG00000013768) #23	Rem2 (ENSPEMG00000011668) #24	Prmt5 (ENSPEMG00000017614) #25	Haus4 (ENSPEMG00000016122) #26	Ajuba (ENSPEMG00000019210) #27	4931414P19Rik (ENSPEMG00000015496) #28	Psmb5 (ENSPEMG00000019276) #29	Psmb11 (ENSPEMG00000026627) #30	Cdh24 (ENSPEMG00000018892) #31	ENSPEMG00000014528 #33	Acin1 (ENSPEMG00000000765) #34	1700123O20Rik (ENSPEMG00000026510) #35	Cirop (ENSPEMG00000027507)	Cebpe (ENSPEMG00000006520) #36	Slc7a8 (ENSPEMG00000002906) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	1079											Dad1 (ENSNGAG00000002448) #16	Abhd4 (ENSNGAG00000019786) #17	Oxa1l (ENSNGAG00000015527) #19	Slc7a7 (ENSNGAG00000014120) #20	Mrpl52 (ENSNGAG00000011028) #21	Mmp14 (ENSNGAG00000011134) #22	Lrp10 (ENSNGAG00000001455) #23	Rem2 (ENSNGAG00000010180) #24	Prmt5 (ENSNGAG00000004212) #25	Haus4 (ENSNGAG00000001010) #26	ENSNGAG00000020767 #27	4931414P19Rik (ENSNGAG00000018515) #28	ENSNGAG00000017377	Psmb5 (ENSNGAG00000014706) #29	Cdh24 (ENSNGAG00000010716) #31	ENSNGAG00000020569 #34	ENSNGAG00000014938 #34	1700123O20Rik (ENSNGAG00000010897) #35	Cebpe (ENSNGAG00000010501) #36	Slc7a8 (ENSNGAG00000003049) #37	Homez (ENSNGAG00000008554)
Lesser Egyptian jerboa	MODERN SPECIES	86						ENSJJAG00000005112	ENSJJAG00000016786	ENSJJAG00000022043	ENSJJAG00000004295	ENSJJAG00000022316	ENSJJAG00000022944	ENSJJAG00000010359	Or6e1 (ENSJJAG00000019078) #18	ENSJJAG00000004185	Mrpl52 (ENSJJAG00000013789) #21	Mmp14 (ENSJJAG00000005540) #22	Lrp10 (ENSJJAG00000010353) #23	Rem2 (ENSJJAG00000012464) #24	Prmt5 (ENSJJAG00000024276) #25	ENSJJAG00000016771 #26	ENSJJAG00000019727 #27	4931414P19Rik (ENSJJAG00000015115) #28	Psmb5 (ENSJJAG00000019820) #29	Psmb11 (ENSJJAG00000001807) #30	ENSJJAG00000018175 #34	ENSJJAG00000002296 #35	Cebpe (ENSJJAG00000000275) #36	Slc7a8 (ENSJJAG00000023797) #37	Ppp1r3e (ENSJJAG00000019272)	Bcl2l2 (ENSJJAG00000020725)	Pabpn1 (ENSJJAG00000023507)
Kangaroo rat	MODERN SPECIES	403										ENSDORG00000026434	ENSDORG00000025415	Dad1 (ENSDORG00000008173) #16	Abhd4 (ENSDORG00000008204) #17	Or6e1 (ENSDORG00000028076) #18	Slc7a7 (ENSDORG00000011331) #20	Mmp14 (ENSDORG00000000144) #22	Lrp10 (ENSDORG00000004922) #23	Rem2 (ENSDORG00000004924) #24	ENSDORG00000004926	Prmt5 (ENSDORG00000004929) #25	ENSDORG00000023447 #27	4931414P19Rik (ENSDORG00000004064) #28	ENSDORG00000010563 #29	Psmb5 (ENSDORG00000024250) #29	Psmb11 (ENSDORG00000010567) #30	Cdh24 (ENSDORG00000010568) #31	ENSDORG00000010574 #34	ENSDORG00000026150 #34	ENSDORG00000024228 #35	Cebpe (ENSDORG00000030127) #36	Slc7a8 (ENSDORG00000005581) #37
Rodentia_A	ANCESTRAL SPECIES	2	ENSGT01050000244869.a.b.b	ENSGT01050000244869.a.b.a	ENSGT00940000163275	ENSGT00940000163058	ENSGT00940000162998.b	ENSGT00940000159469.a.b.a	ENSGT00940000153130.a.b.b	ENSGT00940000160147.b	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00910000148211	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Sciuridae	ANCESTRAL SPECIES	8	ENSGT00940000161790	ENSGT00940000153130.a.b.a.a	ENSGT00940000153073.b.b.b.a.f	ENSGT00940000153130.a.b.a.b	ENSGT00940000153130.a.a.a.c.b	ENSGT00940000162840.C	ENSGT00940000166072	ENSGT00940000160147.b	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00910000148211	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763.j #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Marmotini	ANCESTRAL SPECIES	15	ENSGT00940000162840.C	ENSGT00940000166072	ENSGT00940000160183.d.a	ENSGT00550000075201	ENSGT01010000223901	ENSGT01080000258996	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00910000148211	ENSGT01090000260011.B.t #18	ENSGT01090000260011.B.s #18	ENSGT00530000063506.B.o #19	ENSGT00940000160134 #20	ENSGT00390000005763.j #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Marmotini_b	ANCESTRAL SPECIES	58	ENSGT00940000162840.C	ENSGT00940000166072	ENSGT00940000160183.d.a	ENSGT00550000075201	ENSGT01010000223901	ENSGT01080000258996	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260011.B.t #18	ENSGT01090000260011.B.s #18	ENSGT00910000148211	ENSGT00530000063506.B.o #19	ENSGT00940000160134 #20	ENSGT00390000005763.j #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000161681 #36	ENSGT00940000158278 #37	ENSGT00740000115581.e
Squirrel	MODERN SPECIES	322								TRAV29DV5 (ENSSTOG00000025427)	DAD1 (ENSSTOG00000007925) #16	ABHD4 (ENSSTOG00000023335) #17	ENSSTOG00000034134 #18	ENSSTOG00000032926 #18	ENSSTOG00000003318	SLC7A7 (ENSSTOG00000003328) #20	MRPL52 (ENSSTOG00000010317) #21	MMP14 (ENSSTOG00000027121) #22	LRP10 (ENSSTOG00000010323) #23	REM2 (ENSSTOG00000010340) #24	RBM23 (ENSSTOG00000010354)	PRMT5 (ENSSTOG00000010374) #25	HAUS4 (ENSSTOG00000020110) #26	AJUBA (ENSSTOG00000023817) #27	C14orf93 (ENSSTOG00000007124) #28	PSMB5 (ENSSTOG00000007134) #29	PSMB11 (ENSSTOG00000007142) #30	CDH24 (ENSSTOG00000007148) #31	ACIN1 (ENSSTOG00000007169) #34	C14orf119 (ENSSTOG00000021954) #35	CEBPE (ENSSTOG00000007204) #36	SLC7A8 (ENSSTOG00000007210) #37	RNF212B (ENSSTOG00000027132)
Arctic ground squirrel	MODERN SPECIES	329	TRAV34 (ENSUPAG00010011430)	ENSUPAG00010011423	ENSUPAG00010011419	ENSUPAG00010011410	TRDC (ENSUPAG00010011406)	ENSUPAG00010011402	ENSUPAG00010011401	ENSUPAG00010011399	ENSUPAG00010011393 #15	DAD1 (ENSUPAG00010011383) #16	ENSUPAG00010011367 #17	ENSUPAG00010011365	ENSUPAG00010011358 #19	SLC7A7 (ENSUPAG00010011328) #20	MRPL52 (ENSUPAG00010011316) #21	MMP14 (ENSUPAG00010011304) #22	LRP10 (ENSUPAG00010011283) #23	RBM23 (ENSUPAG00010011269)	PRMT5 (ENSUPAG00010011261) #25	HAUS4 (ENSUPAG00010011240) #26	AJUBA (ENSUPAG00010011224) #27	C14orf93 (ENSUPAG00010011216) #28	PSMB5 (ENSUPAG00010011210) #29	PSMB11 (ENSUPAG00010011206) #30	CDH24 (ENSUPAG00010011199) #31	ACIN1 (ENSUPAG00010010981) #34	CEBPE (ENSUPAG00010010976) #36	C14orf119 (ENSUPAG00010010952) #35	SLC7A8 (ENSUPAG00010010946) #37	RNF212B (ENSUPAG00010010924)	HOMEZ (ENSUPAG00010010920)
Alpin marmot	MODERN SPECIES	1	ENSMMMG00000013943	TRDC (ENSMMMG00000013939)	ENSMMMG00000013936	ENSMMMG00000013935	ENSMMMG00000013930	ENSMMMG00000013901 #15	DAD1 (ENSMMMG00000013891) #16	ABHD4 (ENSMMMG00000013878) #17	ENSMMMG00000013877	ENSMMMG00000013873 #18	ENSMMMG00000013869 #18	ENSMMMG00000013866 #18	ENSMMMG00000013841 #19	SLC7A7 (ENSMMMG00000013825) #20	MRPL52 (ENSMMMG00000013813) #21	MMP14 (ENSMMMG00000013801) #22	LRP10 (ENSMMMG00000013796) #23	REM2 (ENSMMMG00000013781) #24	RBM23 (ENSMMMG00000013775)	PRMT5 (ENSMMMG00000013742) #25	HAUS4 (ENSMMMG00000013733) #26	AJUBA (ENSMMMG00000013718) #27	C14orf93 (ENSMMMG00000013705) #28	PSMB5 (ENSMMMG00000013699) #29	PSMB11 (ENSMMMG00000013681) #30	CDH24 (ENSMMMG00000013665) #31	ACIN1 (ENSMMMG00000013562) #34	C14orf119 (ENSMMMG00000013557) #35	CIROP (ENSMMMG00000013535)	CEBPE (ENSMMMG00000013529) #36	SLC7A8 (ENSMMMG00000013507) #37
Eurasian red squirrel	MODERN SPECIES	11	TRAV36DV7 (ENSSVLG00005003757)	ENSSVLG00005003749	ENSSVLG00005003739	TRDV3 (ENSSVLG00005003727)	ENSSVLG00005003720	ENSSVLG00005003714	ENSSVLG00005003706	ENSSVLG00005003698	ENSSVLG00005003608	ENSSVLG00005003529 #16	ABHD4 (ENSSVLG00005003510) #17	ENSSVLG00005003497	OXA1L (ENSSVLG00005003453) #19	SLC7A7 (ENSSVLG00005003413) #20	ENSSVLG00005003381 #21	MMP14 (ENSSVLG00005003350) #22	LRP10 (ENSSVLG00005003327) #23	REM2 (ENSSVLG00005003310) #24	RBM23 (ENSSVLG00005003194)	PRMT5 (ENSSVLG00005003037) #25	HAUS4 (ENSSVLG00005002983) #26	AJUBA (ENSSVLG00005002965) #27	C14orf93 (ENSSVLG00005002934) #28	ENSSVLG00005002903 #29	PSMB11 (ENSSVLG00005002893) #30	CDH24 (ENSSVLG00005002877) #31	ACIN1 (ENSSVLG00005002620) #34	C14orf119 (ENSSVLG00005002545) #35	CEBPE (ENSSVLG00005002534) #36	SLC7A8 (ENSSVLG00005002489) #37	ENSSVLG00005002458
Hystricomorpha	ANCESTRAL SPECIES	15	ENSGT00940000153886.a.a	ENSGT00940000154888	ENSGT00550000075058	ENSGT00940000162245	ENSGT01050000244869.a.b.a	ENSGT00940000163275	ENSGT00940000163058	ENSGT01080000258996	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Naked mole-rat female	MODERN SPECIES	11	TTBK2 (ENSHGLG00000008689)	ENSHGLG00000021424	UBR1 (ENSHGLG00000008216)	TMEM62 (ENSHGLG00000009535)	ENSHGLG00000018093	ENSHGLG00000015852	ENSHGLG00000017415	SPG11 (ENSHGLG00000019157)	ENSHGLG00000015053	ENSHGLG00000014890	CASC4 (ENSHGLG00000011095)	ENSHGLG00000033322	ENSHGLG00000003344 #19	ENSHGLG00000003498 #20	MRPL52 (ENSHGLG00000045369) #21	MMP14 (ENSHGLG00000003308) #22	LRP10 (ENSHGLG00000003141) #23	REM2 (ENSHGLG00000002476) #24	RBM23 (ENSHGLG00000040941)	PRMT5 (ENSHGLG00000002159) #25	HAUS4 (ENSHGLG00000002077) #26	AJUBA (ENSHGLG00000004520) #27	C14orf93 (ENSHGLG00000003743) #28	PSMB5 (ENSHGLG00000003365) #29	PSMB11 (ENSHGLG00000020072) #30	CDH24 (ENSHGLG00000003051) #31	ENSHGLG00000018997 #34	C14orf119 (ENSHGLG00000011980) #35	ENSHGLG00000049606 #34	CIROP (ENSHGLG00000035340)	CEBPE (ENSHGLG00000011620) #36
Hystricomorpha_a	ANCESTRAL SPECIES	18	ENSGT00940000153886.a.a	ENSGT00940000154888	ENSGT00550000075058	ENSGT00940000162245	ENSGT01050000244869.a.b.a	ENSGT00940000163275	ENSGT00940000153073.b.b.b.b.g	ENSGT00550000075201	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000161681 #36	ENSGT00940000158278 #37	ENSGT00950000182893.a.b	ENSGT00940000161906
Guinea pig	MODERN SPECIES	13	TOX4 (ENSCPOG00000025504)	METTL3 (ENSCPOG00000002545)	SALL2 (ENSCPOG00000040220)	OR10G2 (ENSCPOG00000039240)	OR4E2 (ENSCPOG00000026054)	ENSCPOG00000040263	ENSCPOG00000033000	TRDC (ENSCPOG00000000844)	ENSCPOG00000034500 #15	ENSCPOG00000031141 #16	ABHD4 (ENSCPOG00000000850) #17	ENSCPOG00000032843 #18	OXA1L (ENSCPOG00000022098) #19	SLC7A7 (ENSCPOG00000005730) #20	MRPL52 (ENSCPOG00000009474) #21	MMP14 (ENSCPOG00000024551) #22	LRP10 (ENSCPOG00000014495) #23	REM2 (ENSCPOG00000024124) #24	PRMT5 (ENSCPOG00000014038) #25	HAUS4 (ENSCPOG00000003331) #26	AJUBA (ENSCPOG00000023158) #27	C14orf93 (ENSCPOG00000014044) #28	PSMB5 (ENSCPOG00000014047) #29	PSMB11 (ENSCPOG00000014048) #30	CDH24 (ENSCPOG00000013121) #31	ACIN1 (ENSCPOG00000027234) #34	C14orf119 (ENSCPOG00000036221) #35	CEBPE (ENSCPOG00000014049) #36	SLC7A8 (ENSCPOG00000014051) #37	ENSCPOG00000025949	PPP1R3E (ENSCPOG00000039856)
Hystricomorpha_b	ANCESTRAL SPECIES	18							ENSGT00940000153073.b.b.b.b.g	ENSGT00550000075201	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000161681 #36	ENSGT00940000158278 #37	ENSGT00950000182893.a.b	ENSGT00940000161906
Degu	MODERN SPECIES	317								ENSODEG00000001687	ENSODEG00000001700 #16	ABHD4 (ENSODEG00000001709) #17	ENSODEG00000001719	ENSODEG00000018736 #18	OXA1L (ENSODEG00000001527) #19	SLC7A7 (ENSODEG00000001562) #20	MRPL52 (ENSODEG00000001600) #21	MMP14 (ENSODEG00000001611) #22	LRP10 (ENSODEG00000001621) #23	REM2 (ENSODEG00000001644) #24	PRMT5 (ENSODEG00000001672) #25	HAUS4 (ENSODEG00000001722) #26	ENSODEG00000001742 #27	C14orf93 (ENSODEG00000001756) #28	PSMB5 (ENSODEG00000001779) #29	ENSODEG00000001783	PSMB11 (ENSODEG00000018719) #30	ENSODEG00000001803 #31	ENSODEG00000001841 #34	CEBPE (ENSODEG00000001920) #36	SLC7A8 (ENSODEG00000001928) #37	ENSODEG00000001949	PPP1R3E (ENSODEG00000001965)
Long-tailed chinchilla	MODERN SPECIES	116							ENSCLAG00000010144	TRDC (ENSCLAG00000010037)	ENSCLAG00000012044 #15	DAD1 (ENSCLAG00000011874) #16	ABHD4 (ENSCLAG00000012500) #17	ENSCLAG00000009926 #18	OXA1L (ENSCLAG00000009417) #19	SLC7A7 (ENSCLAG00000011517) #20	MRPL52 (ENSCLAG00000010931) #21	MMP14 (ENSCLAG00000009784) #22	LRP10 (ENSCLAG00000010502) #23	REM2 (ENSCLAG00000011939) #24	PRMT5 (ENSCLAG00000010579) #25	HAUS4 (ENSCLAG00000013026) #26	AJUBA (ENSCLAG00000011137) #27	C14orf93 (ENSCLAG00000010663) #28	PSMB5 (ENSCLAG00000011138) #29	PSMB11 (ENSCLAG00000010224) #30	CDH24 (ENSCLAG00000011914) #31	ACIN1 (ENSCLAG00000010588) #34	C14orf119 (ENSCLAG00000009464) #35	CEBPE (ENSCLAG00000012477) #36	SLC7A8 (ENSCLAG00000010864) #37	ENSCLAG00000011910	ENSCLAG00000010300
Lagomorpha	ANCESTRAL SPECIES	14	ENSGT00950000184977	ENSGT00940000153130.a.b.b	ENSGT00940000160147.a	ENSGT00940000163224.a	ENSGT00900000140957.B	ENSGT00550000075201	ENSGT00730000111639	ENSGT01060000252029	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Pika	MODERN SPECIES	990											DAD1 (ENSOPRG00000000950) #16	ABHD4 (ENSOPRG00000000973) #17	OXA1L (ENSOPRG00000000988) #19	SLC7A7 (ENSOPRG00000001007) #20	MRPL52 (ENSOPRG00000001021) #21	MMP14 (ENSOPRG00000001031) #22	LRP10 (ENSOPRG00000001050) #23	REM2 (ENSOPRG00000001065) #24	RBM23 (ENSOPRG00000001092)	PRMT5 (ENSOPRG00000001113) #25	HAUS4 (ENSOPRG00000001137) #26	C14orf93 (ENSOPRG00000001155) #28
Tree shrew	MODERN SPECIES	3875													SLC7A7 (ENSTBEG00000000757) #20	ENSTBEG00000000949	MRPL52 (ENSTBEG00000000986) #21	MMP14 (ENSTBEG00000001037) #22
Primates	ANCESTRAL SPECIES	2	ENSGT00940000160183.d.a	ENSGT00940000160147.a	ENSGT00940000163224.a	ENSGT00900000140957.B	ENSGT00550000075201	ENSGT00730000111639	ENSGT01080000258109	ENSGT00940000160147.b	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260086.A.c.a.b	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Strepsirrhini	ANCESTRAL SPECIES	2	ENSGT00940000153130.a.a.a.c.a	ENSGT00940000161790	ENSGT00940000162524.A	ENSGT00940000162840.C	ENSGT00940000160183.d.a	ENSGT00940000160147.a.p	ENSGT00550000075201	ENSGT00940000160147.b	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260086.A.c.a.b	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Lemuriformes	ANCESTRAL SPECIES	8	ENSGT00900000140957.A.a.b	ENSGT00940000153130.a.a.a.c.a	ENSGT00940000161790	ENSGT00940000162524.A	ENSGT00940000162840.C	ENSGT00940000160183.d.a	ENSGT00940000160147.a.p	ENSGT00940000160147.b	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260086.A.c.a.b	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Mouse lemur	MODERN SPECIES	22	ENSMICG00000026679	TRAV9-1 (ENSMICG00000045305)	ENSMICG00000044028	TRAV9-2 (ENSMICG00000047919)	ENSMICG00000036456	TRAV21 (ENSMICG00000042869)	ENSMICG00000048028	TRAV34 (ENSMICG00000047656)	ENSMICG00000045157	DAD1 (ENSMICG00000012690) #16	ABHD4 (ENSMICG00000012697) #17	ENSMICG00000028761 #18	OXA1L (ENSMICG00000001403) #19	SLC7A7 (ENSMICG00000036164) #20	MRPL52 (ENSMICG00000006201) #21	MMP14 (ENSMICG00000006204) #22	LRP10 (ENSMICG00000006358) #23	REM2 (ENSMICG00000047327) #24	RBM23 (ENSMICG00000006364)	PRMT5 (ENSMICG00000015023) #25	HAUS4 (ENSMICG00000030177) #26	AJUBA (ENSMICG00000009193) #27	C14orf93 (ENSMICG00000009205) #28	PSMB5 (ENSMICG00000035988) #29	CDH24 (ENSMICG00000002564) #31	ACIN1 (ENSMICG00000002575) #34	CEBPE (ENSMICG00000034256) #36	SLC7A8 (ENSMICG00000002594) #37	RNF212B (ENSMICG00000044189)	HOMEZ (ENSMICG00000009996)	PPP1R3E (ENSMICG00000042784)
Lemuriformes_a	ANCESTRAL SPECIES	1	ENSGT00940000154455.a.b	ENSGT00940000154455.a.a	ENSGT00940000153130.a.a.b	ENSGT00940000153073.b.b.b.b	ENSGT00940000153073.b.b.b.a.d.a	ENSGT00900000140957.A.a.a	ENSGT00940000163507	ENSGT00940000160147.b	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260086.A.c.a.b	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Coquerels sifaka	MODERN SPECIES	424	METTL3 (ENSPCOG00000024390)	SALL2 (ENSPCOG00000017266)	OR10G2 (ENSPCOG00000008398)	TRAV2 (ENSPCOG00000013662)	TRAV3 (ENSPCOG00000013386)	TRAV8-3 (ENSPCOG00000013652)	TRAV9-1 (ENSPCOG00000009429)	TRAV18 (ENSPCOG00000013294)	ENSPCOG00000015924	DAD1 (ENSPCOG00000012877) #16	ABHD4 (ENSPCOG00000000567) #17	ENSPCOG00000012865 #18	OXA1L (ENSPCOG00000024151) #19	SLC7A7 (ENSPCOG00000015863) #20	MRPL52 (ENSPCOG00000027612) #21	MMP14 (ENSPCOG00000020895) #22	LRP10 (ENSPCOG00000020765) #23	REM2 (ENSPCOG00000025110) #24	RBM23 (ENSPCOG00000018564)	PRMT5 (ENSPCOG00000017358) #25	HAUS4 (ENSPCOG00000016850) #26	AJUBA (ENSPCOG00000016135) #27	C14orf93 (ENSPCOG00000010379) #28	PSMB5 (ENSPCOG00000021862) #29	CDH24 (ENSPCOG00000003143) #31	ACIN1 (ENSPCOG00000002308) #34	CIROP (ENSPCOG00000024150)	CEBPE (ENSPCOG00000019222) #36	SLC7A8 (ENSPCOG00000027947) #37	RNF212B (ENSPCOG00000017081)	HOMEZ (ENSPCOG00000019744)
Greater bamboo lemur	MODERN SPECIES	751	ENSPSMG00000004788	ENSPSMG00000004793	ENSPSMG00000004804	ENSPSMG00000004812	ENSPSMG00000004818	ENSPSMG00000004823	ENSPSMG00000004832	ENSPSMG00000004844	DAD1 (ENSPSMG00000004854) #16	ABHD4 (ENSPSMG00000004876) #17	OR6J1 (ENSPSMG00000004890)	ENSPSMG00000004892 #18	OXA1L (ENSPSMG00000004934) #19	SLC7A7 (ENSPSMG00000005010) #20	MRPL52 (ENSPSMG00000005045) #21	MMP14 (ENSPSMG00000005056) #22	LRP10 (ENSPSMG00000005091) #23	REM2 (ENSPSMG00000005112) #24	RBM23 (ENSPSMG00000005248)	PRMT5 (ENSPSMG00000005651) #25	HAUS4 (ENSPSMG00000006188) #26	AJUBA (ENSPSMG00000006254) #27	C14orf93 (ENSPSMG00000006267) #28	PSMB5 (ENSPSMG00000006294) #29	PSMB11 (ENSPSMG00000006305) #30	CDH24 (ENSPSMG00000006370) #31	ACIN1 (ENSPSMG00000006617) #34	C14orf119 (ENSPSMG00000007129) #35	CIROP (ENSPSMG00000007132)	CEBPE (ENSPSMG00000007139) #36	SLC7A8 (ENSPSMG00000007241) #37
Bushbaby	MODERN SPECIES	340							ENSOGAG00000029709	TRDC (ENSOGAG00000006210)	TRAC (ENSOGAG00000027202)	DAD1 (ENSOGAG00000006219) #16	ABHD4 (ENSOGAG00000006223) #17	OR6J1 (ENSOGAG00000006226)	ENSOGAG00000024512 #18	OXA1L (ENSOGAG00000000631) #19	SLC7A7 (ENSOGAG00000000632) #20	MMP14 (ENSOGAG00000012736) #22	LRP10 (ENSOGAG00000005090) #23	REM2 (ENSOGAG00000027026) #24	RBM23 (ENSOGAG00000014794)	PRMT5 (ENSOGAG00000005094) #25	HAUS4 (ENSOGAG00000000586) #26	AJUBA (ENSOGAG00000034052) #27	C14orf93 (ENSOGAG00000005106) #28	PSMB5 (ENSOGAG00000005107) #29	PSMB11 (ENSOGAG00000034070) #30	CDH24 (ENSOGAG00000005114) #31	ACIN1 (ENSOGAG00000012605) #34	CEBPE (ENSOGAG00000001312) #36	SLC7A8 (ENSOGAG00000009274) #37	HOMEZ (ENSOGAG00000032616)	PPP1R3E (ENSOGAG00000030261)
Haplorrhini	ANCESTRAL SPECIES	12							ENSGT01070000257199	ENSGT01100000264510	ENSGT00940000160147.b	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Tarsier	MODERN SPECIES	5703									ENSTSYG00000033139	DAD1 (ENSTSYG00000013309) #16	ABHD4 (ENSTSYG00000014128) #17	ENSTSYG00000026842 #18	OXA1L (ENSTSYG00000014505) #19	SLC7A7 (ENSTSYG00000014508) #20	MRPL52 (ENSTSYG00000028483) #21	MMP14 (ENSTSYG00000001822) #22	LRP10 (ENSTSYG00000006119) #23	REM2 (ENSTSYG00000006124) #24	RBM23 (ENSTSYG00000014755)	PRMT5 (ENSTSYG00000026964) #25	HAUS4 (ENSTSYG00000012825) #26
Simiiformes	ANCESTRAL SPECIES	2	ENSGT00940000160147.a.m	ENSGT00940000160147.a.n	ENSGT00940000163224.a	ENSGT00920000149497	ENSGT00900000140957.B	ENSGT00940000165951	ENSGT00550000075201	ENSGT00730000111639	ENSGT00940000160147.b	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Catarrhini	ANCESTRAL SPECIES	9	ENSGT00940000160147.a.m	ENSGT00940000160147.a.n	ENSGT00940000163224.a	ENSGT00920000149497	ENSGT00900000140957.B	ENSGT00940000165951	ENSGT00550000075201	ENSGT00730000111639	ENSGT00940000160147.b	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Hominoidea	ANCESTRAL SPECIES	12	ENSGT00940000160147.a.m	ENSGT00940000160147.a.n	ENSGT00940000163224.a	ENSGT00920000149497	ENSGT00900000140957.B	ENSGT00940000165951	ENSGT00550000075201	ENSGT00730000111639	ENSGT00940000160147.b	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Hominidae	ANCESTRAL SPECIES	14	ENSGT00940000160183.d.a	ENSGT00940000160147.a.m	ENSGT00940000160147.a.n	ENSGT00940000163224.a	ENSGT00920000149497	ENSGT00900000140957.B	ENSGT00940000165951	ENSGT00550000075201	ENSGT00730000111639	ENSGT00940000160147.b	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	12	ENSGT00940000160183.d.a	ENSGT00940000160147.a.m	ENSGT00940000160147.a.n	ENSGT00940000163224.a	ENSGT00920000149497	ENSGT00900000140957.B	ENSGT00940000165951	ENSGT00550000075201	ENSGT00730000111639	ENSGT00940000160147.b	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Homo/Pan group	ANCESTRAL SPECIES	11	ENSGT00940000160183.d.a	ENSGT00940000160147.a.m	ENSGT00940000160147.a.n	ENSGT00940000163224.a	ENSGT00920000149497	ENSGT00900000140957.B	ENSGT00940000165951	ENSGT00550000075201	ENSGT00730000111639	ENSGT00940000160147.b	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Pan	ANCESTRAL SPECIES	8	ENSGT00900000140957.C	ENSGT00940000160183.d.a	ENSGT00940000160147.a.m	ENSGT00940000160147.a.n	ENSGT00920000149497	ENSGT00900000140957.B	ENSGT00550000075201	ENSGT00940000173064	ENSGT00730000111639	ENSGT00940000160147.b	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00910000145938	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Bonobo	MODERN SPECIES	5	ENSPPAG00000032939	TRAV36DV7 (ENSPPAG00000032956)	ENSPPAG00000040762	TRAV38-2DV8 (ENSPPAG00000032924)	ENSPPAG00000033074	TRAV41 (ENSPPAG00000033024)	ENSPPAG00000014917	ENSPPAG00000009192	TRDV3 (ENSPPAG00000011053)	TRAC (ENSPPAG00000037107)	DAD1 (ENSPPAG00000026093) #16	ABHD4 (ENSPPAG00000030993) #17	OXA1L (ENSPPAG00000034085) #19	SLC7A7 (ENSPPAG00000036954) #20	MRPL52 (ENSPPAG00000033265) #21	MMP14 (ENSPPAG00000037241) #22	LRP10 (ENSPPAG00000029431) #23	REM2 (ENSPPAG00000041292) #24	RBM23 (ENSPPAG00000037922)	PRMT5 (ENSPPAG00000032055) #25	HAUS4 (ENSPPAG00000040161) #26	AJUBA (ENSPPAG00000031512) #27	C14orf93 (ENSPPAG00000036818) #28	PSMB5 (ENSPPAG00000043004) #29	PSMB11 (ENSPPAG00000005580) #30	CDH24 (ENSPPAG00000035182) #31	ACIN1 (ENSPPAG00000041392) #34	ENSPPAG00000037712	CIROP (ENSPPAG00000041297)	CEBPE (ENSPPAG00000000817) #36	SLC7A8 (ENSPPAG00000029356) #37
Chimpanzee	MODERN SPECIES	5	TRAV26-2 (ENSPTRG00000044511)	ENSPTRG00000044743	ENSPTRG00000047747	TRAV38-1 (ENSPTRG00000046310)	TRAV38-2DV8 (ENSPTRG00000042891)	TRAV41 (ENSPTRG00000046333)	ENSPTRG00000048936	ENSPTRG00000048464	TRDV3 (ENSPTRG00000050301)	TRAC (ENSPTRG00000044038)	DAD1 (ENSPTRG00000006141) #16	ABHD4 (ENSPTRG00000006143) #17	OXA1L (ENSPTRG00000006145) #19	SLC7A7 (ENSPTRG00000006146) #20	MRPL52 (ENSPTRG00000006147) #21	MMP14 (ENSPTRG00000006148) #22	LRP10 (ENSPTRG00000006149) #23	REM2 (ENSPTRG00000006150) #24	RBM23 (ENSPTRG00000006151)	PRMT5 (ENSPTRG00000006152) #25	HAUS4 (ENSPTRG00000006153) #26	AJUBA (ENSPTRG00000006154) #27	C14H14orf93 (ENSPTRG00000006155) #28	PSMB5 (ENSPTRG00000006156) #29	CDH24 (ENSPTRG00000006158) #31	ACIN1 (ENSPTRG00000006159) #34	C14H14orf119 (ENSPTRG00000006161)	CIROP (ENSPTRG00000044020)	CEBPE (ENSPTRG00000006162) #36	SLC7A8 (ENSPTRG00000006164) #37	MGST1 (ENSPTRG00000004737)
Human	MODERN SPECIES	5	TRAJ9 (ENSG00000211880)	TRAJ7 (ENSG00000211882)	TRAJ6 (ENSG00000211883)	TRAJ5 (ENSG00000211884)	TRAJ4 (ENSG00000211885)	TRAJ3 (ENSG00000211886)	TRAJ2 (ENSG00000211887)	TRAJ1 (ENSG00000211888)	TRAC (ENSG00000277734)	DAD1 (ENSG00000129562) #16	ABHD4 (ENSG00000100439) #17	OR6J1 (ENSG00000255804)	OXA1L (ENSG00000155463) #19	SLC7A7 (ENSG00000155465) #20	MRPL52 (ENSG00000172590) #21	MMP14 (ENSG00000157227) #22	LRP10 (ENSG00000197324) #23	REM2 (ENSG00000139890) #24	RBM23 (ENSG00000100461)	PRMT5 (ENSG00000100462) #25	HAUS4 (ENSG00000092036) #26	ENSG00000259132	AJUBA (ENSG00000129474) #27	C14orf93 (ENSG00000100802) #28	PSMB5 (ENSG00000100804) #29	PSMB11 (ENSG00000222028) #30	CDH24 (ENSG00000139880) #31	ACIN1 (ENSG00000100813) #34	C14orf119 (ENSG00000179933) #35	CIROP (ENSG00000283654)	CEBPE (ENSG00000092067) #36
Gorilla	MODERN SPECIES	5	TRAV36DV7 (ENSGGOG00000037745)	TRAV38-1 (ENSGGOG00000039562)	TRAV38-2DV8 (ENSGGOG00000036359)	ENSGGOG00000036346	TRAV41 (ENSGGOG00000041745)	ENSGGOG00000043281	ENSGGOG00000037441	TRDV3 (ENSGGOG00000028378)	ENSGGOG00000022509	TRAC (ENSGGOG00000024280)	DAD1 (ENSGGOG00000028137) #16	ABHD4 (ENSGGOG00000007368) #17	OXA1L (ENSGGOG00000003688) #19	SLC7A7 (ENSGGOG00000003694) #20	MRPL52 (ENSGGOG00000001649) #21	MMP14 (ENSGGOG00000001650) #22	LRP10 (ENSGGOG00000015695) #23	REM2 (ENSGGOG00000015704) #24	RBM23 (ENSGGOG00000015707)	PRMT5 (ENSGGOG00000010839) #25	HAUS4 (ENSGGOG00000007504) #26	AJUBA (ENSGGOG00000014539) #27	C14orf93 (ENSGGOG00000014548) #28	PSMB5 (ENSGGOG00000026856) #29	PSMB11 (ENSGGOG00000007392) #30	CDH24 (ENSGGOG00000007398) #31	ACIN1 (ENSGGOG00000007403) #34	ENSGGOG00000025103	CIROP (ENSGGOG00000043009)	CEBPE (ENSGGOG00000007419) #36	SLC7A8 (ENSGGOG00000007423) #37
Orangutan	MODERN SPECIES	5	ENSPPYG00000040330	ENSPPYG00000040270	TRAJ18 (ENSPPYG00000032749)	ENSPPYG00000040530	ENSPPYG00000034775	ENSPPYG00000033635	TRAC (ENSPPYG00000005637)	ENSPPYG00000031404	DAD1 (ENSPPYG00000005638) #16	ABHD4 (ENSPPYG00000005639) #17	OR6J1 (ENSPPYG00000005640)	ENSPPYG00000019928	OXA1L (ENSPPYG00000005642) #19	SLC7A7 (ENSPPYG00000005643) #20	ENSPPYG00000005645 #21	MMP14 (ENSPPYG00000005646) #22	LRP10 (ENSPPYG00000005647) #23	REM2 (ENSPPYG00000005648) #24	RBM23 (ENSPPYG00000005649)	PRMT5 (ENSPPYG00000005650) #25	HAUS4 (ENSPPYG00000005651) #26	AJUBA (ENSPPYG00000005652) #27	C14H14orf93 (ENSPPYG00000005653) #28	ENSPPYG00000005655 #30	PSMB5 (ENSPPYG00000041109) #29	CDH24 (ENSPPYG00000005656) #31	ACIN1 (ENSPPYG00000005657) #34	ENSPPYG00000005658	CIROP (ENSPPYG00000037705)	CEBPE (ENSPPYG00000005659) #36	SLC7A8 (ENSPPYG00000005660) #37
Gibbon	MODERN SPECIES	14	ENSNLEG00000031642	TRAV38-2DV8 (ENSNLEG00000030966)	ENSNLEG00000035066	ENSNLEG00000033140	ENSNLEG00000032780	ENSNLEG00000029590	ENSNLEG00000027680	TRDV3 (ENSNLEG00000014664)	ENSNLEG00000031059	DAD1 (ENSNLEG00000014666) #16	ABHD4 (ENSNLEG00000035873) #17	ENSNLEG00000034695	ENSNLEG00000028419 #18	OXA1L (ENSNLEG00000014684) #19	SLC7A7 (ENSNLEG00000014725) #20	MMP14 (ENSNLEG00000014762) #22	LRP10 (ENSNLEG00000014773) #23	REM2 (ENSNLEG00000014788) #24	RBM23 (ENSNLEG00000014792)	PRMT5 (ENSNLEG00000014810) #25	HAUS4 (ENSNLEG00000014853) #26	ENSNLEG00000014877 #27	C14orf93 (ENSNLEG00000014883) #28	PSMB5 (ENSNLEG00000034685) #29	CDH24 (ENSNLEG00000014900) #31	ACIN1 (ENSNLEG00000014920) #34	C14orf119 (ENSNLEG00000014956) #35	CIROP (ENSNLEG00000031249)	CEBPE (ENSNLEG00000014958) #36	SLC7A8 (ENSNLEG00000014960) #37	RNF212B (ENSNLEG00000014991)
Cercopithecidae	ANCESTRAL SPECIES	7	ENSGT01050000245453	ENSGT01050000248383	ENSGT01050000248319	ENSGT00940000160147.a.n	ENSGT00900000140957.B	ENSGT00550000075201	ENSGT00730000111639	ENSGT00940000160147.b	ENSGT00390000003324 #16	ENSGT00390000016277.b.ab #17	ENSGT00390000016277.b.`b.b #17	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634.g #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Cercopithecinae	ANCESTRAL SPECIES	2	ENSGT00940000153130.a.b.a.a	ENSGT00940000160183.d.a	ENSGT00940000160147.a.m	ENSGT00940000163224.a	ENSGT00920000149497	ENSGT00940000160147.a.n	ENSGT00900000140957.B	ENSGT00550000075201	ENSGT00730000111639	ENSGT00940000160147.b	ENSGT00390000003324 #16	ENSGT00390000016277.b.ab #17	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634.g #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Vervet Monkey	MODERN SPECIES	21	TRAJ28 (ENSCSAG00000019668)	ENSCSAG00000019669	ENSCSAG00000019670	ENSCSAG00000019671	ENSCSAG00000019672	ENSCSAG00000019673	ENSCSAG00000019674	TRAJ2 (ENSCSAG00000019675)	TRAC (ENSCSAG00000016292)	ENSCSAG00000016283	DAD1 (ENSCSAG00000016279) #16	ABHD4 (ENSCSAG00000016272) #17	OXA1L (ENSCSAG00000016254) #19	SLC7A7 (ENSCSAG00000016247) #20	MRPL52 (ENSCSAG00000016242) #21	MMP14 (ENSCSAG00000016239) #22	LRP10 (ENSCSAG00000016235) #23	REM2 (ENSCSAG00000016222) #24	RBM23 (ENSCSAG00000016213)	PRMT5 (ENSCSAG00000016179) #25	HAUS4 (ENSCSAG00000016126) #26	AJUBA (ENSCSAG00000016121) #27	C14orf93 (ENSCSAG00000016115) #28	PSMB5 (ENSCSAG00000016112) #29	PSMB11 (ENSCSAG00000019676) #30	CDH24 (ENSCSAG00000016106) #31	ACIN1 (ENSCSAG00000016098) #34	ENSCSAG00000016091	CEBPE (ENSCSAG00000016086) #36	SLC7A8 (ENSCSAG00000016082) #37	RNF212B (ENSCSAG00000016072)
Cercopithecinae_a	ANCESTRAL SPECIES	1	ENSGT00730000111639	ENSGT01050000248103	ENSGT01080000258109	ENSGT00980000200245	ENSGT01050000247358	ENSGT00960000192634	ENSGT01050000245453	ENSGT01050000248383	ENSGT01050000248319	ENSGT00940000160147.b	ENSGT00390000003324 #16	ENSGT00390000016277.b.ab #17	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634.g #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Macaca	ANCESTRAL SPECIES	1	ENSGT00940000162840.C	ENSGT00940000153130.a.b.a.a	ENSGT00940000160183.d.a	ENSGT00940000160147.a.m	ENSGT00940000163224.a	ENSGT00940000160147.a.n	ENSGT00900000140957.B	ENSGT00550000075201	ENSGT00730000111639	ENSGT00940000160147.b	ENSGT00390000003324 #16	ENSGT00390000016277.b.ab #17	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634.g #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00910000145938	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Pig-tailed macaque	MODERN SPECIES	287	TRAV26-2 (ENSMNEG00000038137)	TRAV34 (ENSMNEG00000038004)	TRAV36DV7 (ENSMNEG00000004459)	TRAV38-1 (ENSMNEG00000001485)	TRAV38-2DV8 (ENSMNEG00000038225)	TRAV41 (ENSMNEG00000038293)	TRDC (ENSMNEG00000020614)	ENSMNEG00000024468	TRDV3 (ENSMNEG00000012962)	TRAC (ENSMNEG00000038635)	DAD1 (ENSMNEG00000043891) #16	ENSMNEG00000033846 #17	OXA1L (ENSMNEG00000031247) #19	SLC7A7 (ENSMNEG00000043785) #20	MRPL52 (ENSMNEG00000029791) #21	MMP14 (ENSMNEG00000030751) #22	LRP10 (ENSMNEG00000039487) #23	REM2 (ENSMNEG00000028496) #24	RBM23 (ENSMNEG00000042442)	PRMT5 (ENSMNEG00000035535) #25	HAUS4 (ENSMNEG00000040020) #26	AJUBA (ENSMNEG00000033852) #27	C14orf93 (ENSMNEG00000039045) #28	PSMB5 (ENSMNEG00000044213) #29	CDH24 (ENSMNEG00000030948) #31	ACIN1 (ENSMNEG00000035938) #34	ENSMNEG00000044239	CIROP (ENSMNEG00000039815)	CEBPE (ENSMNEG00000019353) #36	SLC7A8 (ENSMNEG00000040287) #37	ENSMNEG00000025147
Macaca_a	ANCESTRAL SPECIES	2	ENSGT00980000200245	ENSGT01050000247663	ENSGT01010000227904	ENSGT01050000247358	ENSGT00960000192634	ENSGT01030000240289	ENSGT01050000245453	ENSGT01050000248383	ENSGT00980000203093	ENSGT00940000160147.b	ENSGT00390000003324 #16	ENSGT00390000016277.b.ab #17	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634.g #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000163505.a.a.a.b.b.b	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00910000145938	ENSGT00940000163573	ENSGT00940000161681 #36
Rhesus	MODERN SPECIES	17	ENSMMUG00000057959	ENSMMUG00000058816	ENSMMUG00000062391	ENSMMUG00000060586	ENSMMUG00000065053	TRAJ18 (ENSMMUG00000059574)	ENSMMUG00000055037	ENSMMUG00000059713	ENSMMUG00000052151	ENSMMUG00000054763	DAD1 (ENSMMUG00000000830) #16	ABHD4 (ENSMMUG00000009441) #17	OXA1L (ENSMMUG00000000411) #19	SLC7A7 (ENSMMUG00000000413) #20	MRPL52 (ENSMMUG00000013663) #21	MMP14 (ENSMMUG00000013665) #22	LRP10 (ENSMMUG00000016100) #23	REM2 (ENSMMUG00000016098) #24	RBM23 (ENSMMUG00000018381)	PRMT5 (ENSMMUG00000001035) #25	HAUS4 (ENSMMUG00000002668) #26	AJUBA (ENSMMUG00000008475) #27	C7H14orf93 (ENSMMUG00000008477) #28	ENSMMUG00000013585	PSMB11 (ENSMMUG00000006008) #30	PSMB5 (ENSMMUG00000006007) #29	CDH24 (ENSMMUG00000006009) #31	ACIN1 (ENSMMUG00000012979) #34	ENSMMUG00000012978	CIROP (ENSMMUG00000061279)	CEBPE (ENSMMUG00000056675) #36
Crab-eating macaque	MODERN SPECIES	17	ENSMFAG00000057943	ENSMFAG00000061803	ENSMFAG00000056354	ENSMFAG00000053881	ENSMFAG00000063063	TRAJ18 (ENSMFAG00000052354)	ENSMFAG00000065697	ENSMFAG00000055649	ENSMFAG00000062552	ENSMFAG00000059308	DAD1 (ENSMFAG00000029604) #16	ENSMFAG00000001529 #17	OXA1L (ENSMFAG00000015207) #19	SLC7A7 (ENSMFAG00000045060) #20	MRPL52 (ENSMFAG00000000620) #21	MMP14 (ENSMFAG00000038289) #22	LRP10 (ENSMFAG00000040578) #23	REM2 (ENSMFAG00000032788) #24	RBM23 (ENSMFAG00000037595)	PRMT5 (ENSMFAG00000001324) #25	HAUS4 (ENSMFAG00000042332) #26	AJUBA (ENSMFAG00000055086) #27	C14orf93 (ENSMFAG00000001383) #28	ENSMFAG00000035808	PSMB11 (ENSMFAG00000010271) #30	PSMB5 (ENSMFAG00000040803) #29	CDH24 (ENSMFAG00000002248) #31	ACIN1 (ENSMFAG00000044437) #34	ENSMFAG00000063199	CIROP (ENSMFAG00000039515)	CEBPE (ENSMFAG00000065070) #36
Cercopithecinae_b	ANCESTRAL SPECIES	8	ENSGT00730000111639	ENSGT01050000248103	ENSGT01080000258109	ENSGT00980000200245	ENSGT01050000247358	ENSGT00960000192634	ENSGT01050000245453	ENSGT01050000248383	ENSGT01050000248319	ENSGT00940000160147.b	ENSGT00390000003324 #16	ENSGT00390000016277.b.ab #17	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634.g #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Olive baboon	MODERN SPECIES	17	ENSPANG00000042807	ENSPANG00000037419	ENSPANG00000039002	ENSPANG00000040179	ENSPANG00000038254	TRAJ18 (ENSPANG00000043807)	ENSPANG00000049551	ENSPANG00000040216	ENSPANG00000046666	TRAC (ENSPANG00000022567)	DAD1 (ENSPANG00000022399) #16	ABHD4 (ENSPANG00000003912) #17	OXA1L (ENSPANG00000011741) #19	SLC7A7 (ENSPANG00000020911) #20	MRPL52 (ENSPANG00000021102) #21	MMP14 (ENSPANG00000023206) #22	LRP10 (ENSPANG00000003911) #23	REM2 (ENSPANG00000026142) #24	RBM23 (ENSPANG00000001324)	PRMT5 (ENSPANG00000017607) #25	HAUS4 (ENSPANG00000015306) #26	AJUBA (ENSPANG00000011738) #27	C14orf93 (ENSPANG00000011161) #28	ENSPANG00000015305 #29	PSMB11 (ENSPANG00000017114) #30	CDH24 (ENSPANG00000019643) #31	ACIN1 (ENSPANG00000019644) #34	C14orf119 (ENSPANG00000019645) #35	CIROP (ENSPANG00000033367)	CEBPE (ENSPANG00000036119) #36	SLC7A8 (ENSPANG00000024120) #37
Cercopithecinae_d	ANCESTRAL SPECIES	109	ENSGT00940000162524.A	ENSGT00940000162840.C	ENSGT00940000160183.d.a	ENSGT00940000160147.a.m	ENSGT00940000160147.a.n	ENSGT00900000140957.B	ENSGT00550000075201	ENSGT00940000170243	ENSGT00730000111639	ENSGT00940000160147.b	ENSGT00390000003324 #16	ENSGT00390000016277.b.ab #17	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634.g #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Drill	MODERN SPECIES	1047						TRAV38-1 (ENSMLEG00000025157)	TRAV38-2DV8 (ENSMLEG00000021755)	ENSMLEG00000024199	TRDV3 (ENSMLEG00000025676)	TRAC (ENSMLEG00000039915)	DAD1 (ENSMLEG00000041482) #16	ENSMLEG00000043691 #17	OXA1L (ENSMLEG00000029808) #19	SLC7A7 (ENSMLEG00000014136) #20	MRPL52 (ENSMLEG00000035746) #21	MMP14 (ENSMLEG00000000094) #22	LRP10 (ENSMLEG00000043127) #23	REM2 (ENSMLEG00000032118) #24	RBM23 (ENSMLEG00000039954)	PRMT5 (ENSMLEG00000035801) #25	ENSMLEG00000044268 #26	AJUBA (ENSMLEG00000001372) #27	C14orf93 (ENSMLEG00000040701) #28	PSMB5 (ENSMLEG00000042905) #29	PSMB11 (ENSMLEG00000013212) #30	CDH24 (ENSMLEG00000033931) #31	ACIN1 (ENSMLEG00000036983) #34	C14orf119 (ENSMLEG00000027439) #35	CIROP (ENSMLEG00000035762)	CEBPE (ENSMLEG00000029229) #36	SLC7A8 (ENSMLEG00000042382) #37
Sooty mangabey	MODERN SPECIES	288	TRAV26-2 (ENSCATG00000023223)	TRAV34 (ENSCATG00000022605)	TRAV36DV7 (ENSCATG00000022068)	TRAV38-1 (ENSCATG00000020630)	TRAV38-2DV8 (ENSCATG00000019859)	TRAV41 (ENSCATG00000019226)	TRDC (ENSCATG00000018487)	ENSCATG00000019120	TRDV3 (ENSCATG00000019903)	TRAC (ENSCATG00000037406)	DAD1 (ENSCATG00000016897) #16	ENSCATG00000022305 #17	OXA1L (ENSCATG00000009400) #19	ENSCATG00000030947 #20	MRPL52 (ENSCATG00000030157) #21	MMP14 (ENSCATG00000003284) #22	LRP10 (ENSCATG00000041990) #23	REM2 (ENSCATG00000012864) #24	RBM23 (ENSCATG00000017832)	PRMT5 (ENSCATG00000014579) #25	ENSCATG00000041460 #26	AJUBA (ENSCATG00000032482) #27	C14orf93 (ENSCATG00000044847) #28	PSMB5 (ENSCATG00000044133) #29	PSMB11 (ENSCATG00000010453) #30	CDH24 (ENSCATG00000011377) #31	ACIN1 (ENSCATG00000044489) #34	C14orf119 (ENSCATG00000021812) #35	CIROP (ENSCATG00000044967)	CEBPE (ENSCATG00000044549) #36	SLC7A8 (ENSCATG00000036217) #37
Rhinopithecus	ANCESTRAL SPECIES	128							ENSGT00940000170243	ENSGT00730000111639	ENSGT00940000160147.b	ENSGT00390000003324 #16	ENSGT00390000016277.b.`b.b #17	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634.g #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Black snub-nosed monkey	MODERN SPECIES	2556						TRAV41 (ENSRBIG00000021879)	ENSRBIG00000022469	TRDV3 (ENSRBIG00000001337)	TRAC (ENSRBIG00000041666)	DAD1 (ENSRBIG00000018620) #16	ENSRBIG00000030411 #17	ENSRBIG00000005098 #18	OXA1L (ENSRBIG00000043882) #19	SLC7A7 (ENSRBIG00000036121) #20	MRPL52 (ENSRBIG00000016834) #21	MMP14 (ENSRBIG00000041147) #22	LRP10 (ENSRBIG00000030290) #23	REM2 (ENSRBIG00000031050) #24	RBM23 (ENSRBIG00000039276)	PRMT5 (ENSRBIG00000033709) #25	ENSRBIG00000028589 #26	AJUBA (ENSRBIG00000039769) #27	C14orf93 (ENSRBIG00000006042) #28	ENSRBIG00000035585 #29	ENSRBIG00000038153 #30	CDH24 (ENSRBIG00000030527) #31	ACIN1 (ENSRBIG00000031308) #34	C14orf119 (ENSRBIG00000029689) #35	CIROP (ENSRBIG00000042248)	CEBPE (ENSRBIG00000040073) #36	SLC7A8 (ENSRBIG00000034720) #37
Golden snub-nosed monkey	MODERN SPECIES	2083							ENSRROG00000026774	TRDV3 (ENSRROG00000007769)	TRAC (ENSRROG00000044326)	DAD1 (ENSRROG00000032400) #16	ENSRROG00000030064 #17	ENSRROG00000003728 #18	OXA1L (ENSRROG00000031458) #19	SLC7A7 (ENSRROG00000036587) #20	MRPL52 (ENSRROG00000038692) #21	MMP14 (ENSRROG00000032097) #22	LRP10 (ENSRROG00000045101) #23	REM2 (ENSRROG00000000769) #24	RBM23 (ENSRROG00000044026)	PRMT5 (ENSRROG00000028985) #25	ENSRROG00000044756 #26	AJUBA (ENSRROG00000040110) #27	C14orf93 (ENSRROG00000007559) #28	PSMB5 (ENSRROG00000034076) #29	PSMB11 (ENSRROG00000025908) #30	CDH24 (ENSRROG00000043868) #31	ACIN1 (ENSRROG00000003676) #34	C14orf119 (ENSRROG00000028124) #35	CIROP (ENSRROG00000029112)	CEBPE (ENSRROG00000039878) #36	SLC7A8 (ENSRROG00000035251) #37
Platyrrhini	ANCESTRAL SPECIES	4	ENSGT00940000160147.a.n.a	ENSGT00940000153130.a.b.b	ENSGT00940000160147.a.m	ENSGT00940000160147.a.n.b	ENSGT00940000163224.a	ENSGT00920000149497	ENSGT00900000140957.B	ENSGT00550000075201	ENSGT00940000160147.b	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546.a	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Cebidae	ANCESTRAL SPECIES	3	ENSGT00940000160183.d.a	ENSGT00940000160147.a.n.a	ENSGT00940000153130.a.b.b	ENSGT00940000160147.a.n.b	ENSGT00940000163224.a	ENSGT00920000149497	ENSGT00900000140957.B	ENSGT00550000075201	ENSGT00940000160147.b	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546.a	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Cebidae_a	ANCESTRAL SPECIES	4	ENSGT00940000162840.C	ENSGT00940000160183.d.a	ENSGT00940000160147.a.n.a	ENSGT00940000160147.a.n.b	ENSGT00940000163224.a	ENSGT00920000149497	ENSGT00900000140957.B	ENSGT00550000075201	ENSGT00940000160147.b	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546.a	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37	ENSGT00740000115581.e
Bolivian squirrel monkey	MODERN SPECIES	52	TRAV26-1 (ENSSBOG00000018975)	ENSSBOG00000009785	TRAV26-2 (ENSSBOG00000018946)	TRAV34 (ENSSBOG00000018340)	ENSSBOG00000019119	ENSSBOG00000004003	TRAV41 (ENSSBOG00000010905)	TRDC (ENSSBOG00000019484)	ENSSBOG00000033224	DAD1 (ENSSBOG00000020528) #16	ABHD4 (ENSSBOG00000034998) #17	ENSSBOG00000005105 #18	OXA1L (ENSSBOG00000028461) #19	SLC7A7 (ENSSBOG00000032553) #20	MRPL52 (ENSSBOG00000022662) #21	MMP14 (ENSSBOG00000026846) #22	LRP10 (ENSSBOG00000033889) #23	REM2 (ENSSBOG00000023345) #24	ENSSBOG00000023037	PRMT5 (ENSSBOG00000036125) #25	HAUS4 (ENSSBOG00000023415) #26	AJUBA (ENSSBOG00000028963) #27	C14orf93 (ENSSBOG00000018297) #28	PSMB5 (ENSSBOG00000030520) #29	PSMB11 (ENSSBOG00000008921) #30	CDH24 (ENSSBOG00000027998) #31	ACIN1 (ENSSBOG00000032127) #34	CIROP (ENSSBOG00000023270)	CEBPE (ENSSBOG00000029783) #36	SLC7A8 (ENSSBOG00000023631) #37	RNF212B (ENSSBOG00000020364)
Capuchin	MODERN SPECIES	170	TRAV34 (ENSCCAG00000013656)	TRAV36DV7 (ENSCCAG00000013691)	ENSCCAG00000017661	ENSCCAG00000018642	TRAV39 (ENSCCAG00000020589)	TRAV40 (ENSCCAG00000026707)	TRAV41 (ENSCCAG00000028015)	TRDC (ENSCCAG00000033911)	TRAC (ENSCCAG00000038072)	ENSCCAG00000035123 #16	ENSCCAG00000035365 #16	ABHD4 (ENSCCAG00000029397) #17	OXA1L (ENSCCAG00000036442) #19	SLC7A7 (ENSCCAG00000031142) #20	MRPL52 (ENSCCAG00000035013) #21	MMP14 (ENSCCAG00000023613) #22	LRP10 (ENSCCAG00000032914) #23	REM2 (ENSCCAG00000034864) #24	ENSCCAG00000025114	PRMT5 (ENSCCAG00000034980) #25	HAUS4 (ENSCCAG00000033831) #26	AJUBA (ENSCCAG00000035773) #27	C14orf93 (ENSCCAG00000009885) #28	ENSCCAG00000032430 #29	CDH24 (ENSCCAG00000029972) #31	ACIN1 (ENSCCAG00000029776) #34	LMLN2 (ENSCCAG00000030416)	CEBPE (ENSCCAG00000019835) #36	SLC7A8 (ENSCCAG00000036899) #37	RNF212B (ENSCCAG00000023177)	ENSCCAG00000024579
Marmoset	MODERN SPECIES	1	ENSCJAG00000046757	ENSCJAG00000046331	ENSCJAG00000039022	ENSCJAG00000046505	ENSCJAG00000041313	ENSCJAG00000045165	TRAC (ENSCJAG00000008714)	DAD1 (ENSCJAG00000074739) #16	ENSCJAG00000047195	ABHD4 (ENSCJAG00000008681) #17	ENSCJAG00000085751	ENSCJAG00000008664 #19	ENSCJAG00000082162	SLC7A7 (ENSCJAG00000008592) #20	MRPL52 (ENSCJAG00000035615) #21	MMP14 (ENSCJAG00000008538) #22	LRP10 (ENSCJAG00000008522) #23	REM2 (ENSCJAG00000037144) #24	RBM23 (ENSCJAG00000008482)	ENSCJAG00000008409 #25	ENSCJAG00000008389 #26	AJUBA (ENSCJAG00000008376) #27	C14orf93 (ENSCJAG00000008320) #28	ENSCJAG00000083931	PSMB11 (ENSCJAG00000046458) #30	PSMB5 (ENSCJAG00000042177) #29	CDH24 (ENSCJAG00000008170) #31	ACIN1 (ENSCJAG00000008076) #34	ENSCJAG00000062341 #35	CIROP (ENSCJAG00000044082)	CEBPE (ENSCJAG00000042468) #36
Mas night monkey	MODERN SPECIES	819	TRAV8-7 (ENSANAG00000029257)	ENSANAG00000024325	TRAV30 (ENSANAG00000013331)	TRAV26-2 (ENSANAG00000011824)	TRAV34 (ENSANAG00000011361)	TRAV38-1 (ENSANAG00000013268)	TRAV38-2DV8 (ENSANAG00000013358)	TRDC (ENSANAG00000013027)	TRAC (ENSANAG00000024027)	DAD1 (ENSANAG00000029416) #16	ABHD4 (ENSANAG00000023988) #17	ENSANAG00000014624 #18	OXA1L (ENSANAG00000034299) #19	SLC7A7 (ENSANAG00000036104) #20	MRPL52 (ENSANAG00000037074) #21	MMP14 (ENSANAG00000021316) #22	LRP10 (ENSANAG00000029303) #23	REM2 (ENSANAG00000024097) #24	ENSANAG00000031466	PRMT5 (ENSANAG00000035246) #25	HAUS4 (ENSANAG00000037413) #26	AJUBA (ENSANAG00000032654) #27	C14orf93 (ENSANAG00000015389) #28	PSMB5 (ENSANAG00000029997) #29	CDH24 (ENSANAG00000023080) #31	ACIN1 (ENSANAG00000034343) #34	CIROP (ENSANAG00000017674)	RNF212B (ENSANAG00000027323)	CEBPE (ENSANAG00000030415) #36	SLC7A8 (ENSANAG00000023721) #37	ENSANAG00000024152
Laurasiatheria	ANCESTRAL SPECIES	3	ENSGT00940000160147.a	ENSGT00940000163224.a	ENSGT00900000140957.B	ENSGT00940000164778	ENSGT00940000165951	ENSGT00550000075201	ENSGT00730000111639	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260011.B #18	ENSGT00910000148211	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Laurasiatheria_a	ANCESTRAL SPECIES	2	ENSGT00940000163224.a	ENSGT00900000140957.B	ENSGT00940000164778	ENSGT00940000165951	ENSGT00550000075201	ENSGT00730000111639	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00910000148211	ENSGT01090000260086.A.c.a.b	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00910000145938	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36
Artiodactyla	ANCESTRAL SPECIES	3	ENSGT00900000140957.B	ENSGT00940000164778	ENSGT00940000165951	ENSGT00550000075201	ENSGT00730000111639	ENSGT01080000258109	ENSGT00940000170768	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260086.A.c.a.b	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00910000145938	ENSGT00390000007438 #35	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Suina	ANCESTRAL SPECIES	30				ENSGT00940000166072	ENSGT00940000165951	ENSGT00550000075201	ENSGT00730000111639	ENSGT00940000160147.b	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260086.A.c.a.b	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841.p #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000161681 #36	ENSGT00940000158278 #37	ENSGT00740000115581.e
Pig	MODERN SPECIES	15	ENSSSCG00000056250	ENSSSCG00000031495	ENSSSCG00000041741	ENSSSCG00000031641	ENSSSCG00000046018	ENSSSCG00000046912	ENSSSCG00000033721	DAD1 (ENSSSCG00000002050) #16	ABHD4 (ENSSSCG00000002051) #17	OR6J1 (ENSSSCG00000002052)	ENSSSCG00000056092 #18	ENSSSCG00000059245 #18	OXA1L (ENSSSCG00000002042) #19	SLC7A7 (ENSSSCG00000002041) #20	MRPL52 (ENSSSCG00000002040) #21	MMP14 (ENSSSCG00000002039) #22	LRP10 (ENSSSCG00000034465) #23	REM2 (ENSSSCG00000031874) #24	RBM23 (ENSSSCG00000026700)	PRMT5 (ENSSSCG00000030045) #25	HAUS4 (ENSSSCG00000033178) #26	AJUBA (ENSSSCG00000029201) #27	C14orf93 (ENSSSCG00000031452) #28	ENSSSCG00000002036 #29	PSMB11 (ENSSSCG00000002038) #30	CDH24 (ENSSSCG00000002037) #31	ENSSSCG00000002034 #34	ENSSSCG00000056336 #34	C14orf119 (ENSSSCG00000002035) #35	CEBPE (ENSSSCG00000002033) #36	SLC7A8 (ENSSSCG00000002032) #37
Chacoan peccary	MODERN SPECIES	884	ENSCWAG00000004049	ENSCWAG00000004027	ENSCWAG00000004010	TRAV29DV5 (ENSCWAG00000003985)	TRAV26-1 (ENSCWAG00000003960)	ENSCWAG00000003910	TRDV3 (ENSCWAG00000020957)	ENSCWAG00000020911	DAD1 (ENSCWAG00000020889) #16	ABHD4 (ENSCWAG00000020875) #17	OR6J1 (ENSCWAG00000020867)	ENSCWAG00000020864 #18	OXA1L (ENSCWAG00000020858) #19	SLC7A7 (ENSCWAG00000020831) #20	MRPL52 (ENSCWAG00000020797) #21	MMP14 (ENSCWAG00000020783) #22	LRP10 (ENSCWAG00000020768) #23	REM2 (ENSCWAG00000020754) #24	RBM23 (ENSCWAG00000020740)	PRMT5 (ENSCWAG00000020565) #25	HAUS4 (ENSCWAG00000020523) #26	AJUBA (ENSCWAG00000020496) #27	C14orf93 (ENSCWAG00000020482) #28	ENSCWAG00000020473 #29	PSMB11 (ENSCWAG00000020461) #30	CDH24 (ENSCWAG00000020444) #31	ACIN1 (ENSCWAG00000019983) #34	C14orf119 (ENSCWAG00000019963) #35	CEBPE (ENSCWAG00000019947) #36	SLC7A8 (ENSCWAG00000019702) #37	RNF212B (ENSCWAG00000019641)
Artiodactyla_a	ANCESTRAL SPECIES	2	ENSGT00900000140957.B	ENSGT00940000164778	ENSGT00940000165951	ENSGT00550000075201	ENSGT00730000111639	ENSGT01080000258109	ENSGT00940000170768	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00910000148211	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00910000145938	ENSGT00390000007438 #35	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Camelidae	ANCESTRAL SPECIES	41	ENSGT00940000153130.a.a.a.c.b	ENSGT00940000162524.A	ENSGT00940000163224.a	ENSGT00900000140957.B	ENSGT00550000075201	ENSGT00940000165951	ENSGT00730000111639	ENSGT01100000266667	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790.n #34	ENSGT00910000145938	ENSGT00390000007438 #35	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Arabian camel	MODERN SPECIES	32	TRDV2 (ENSCDRG00005006905)	TRDV3 (ENSCDRG00005006953)	ENSCDRG00005006988	ENSCDRG00005007000	ENSCDRG00005007017	ENSCDRG00005007031	ENSCDRG00005007041 #15	DAD1 (ENSCDRG00005007062) #16	ABHD4 (ENSCDRG00005007100) #17	ENSCDRG00005007127 #18	ENSCDRG00005007140	ENSCDRG00005007166 #18	OXA1L (ENSCDRG00005007183) #19	SLC7A7 (ENSCDRG00005007288) #20	ENSCDRG00005007346 #21	MMP14 (ENSCDRG00005007391) #22	MRPL52 (ENSCDRG00005007435) #21	LRP10 (ENSCDRG00005007477) #23	REM2 (ENSCDRG00005007658) #24	ENSCDRG00005007748	PRMT5 (ENSCDRG00005007871) #25	HAUS4 (ENSCDRG00005008205) #26	AJUBA (ENSCDRG00005008424) #27	C14orf93 (ENSCDRG00005008496) #28	PSMB5 (ENSCDRG00005008563) #29	PSMB11 (ENSCDRG00005008630) #30	CDH24 (ENSCDRG00005008657) #31	ACIN1 (ENSCDRG00005008746) #34	ENSCDRG00005009770	ENSCDRG00005009829 #35	ENSCDRG00005009853
Artiodactyla_b	ANCESTRAL SPECIES	2	ENSGT00900000140957.B	ENSGT00940000164778	ENSGT00940000165951	ENSGT00550000075201	ENSGT00730000111639	ENSGT01080000258109	ENSGT00940000170768	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00910000148211	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00910000145938	ENSGT00390000007438 #35	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Cetacea	ANCESTRAL SPECIES	2	ENSGT00940000153130.a.b.a.a.b	ENSGT00940000166072	ENSGT00940000160147.a	ENSGT00940000163224.a	ENSGT00900000140957.B	ENSGT00730000111639	ENSGT00940000170768	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00910000148211	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000161681 #36	ENSGT00940000158278 #37	ENSGT00740000115581.e
Odontoceti	ANCESTRAL SPECIES	2	ENSGT00940000166072.b	ENSGT00940000166072.a	ENSGT00940000160147.a	ENSGT00940000163224.a	ENSGT00900000140957.B	ENSGT00730000111639	ENSGT00940000170768	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00910000148211	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000161681 #36	ENSGT00940000158278 #37	ENSGT00740000115581.e
Odontoceti_a	ANCESTRAL SPECIES	2	ENSGT00940000163398	ENSGT00940000153073.a	ENSGT00940000153073.b.b.b.b.z.a	ENSGT00940000166072.a	ENSGT00940000160147.a	ENSGT00940000163224.a	ENSGT00900000140957.B	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00910000148211	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141.i #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000161681 #36	ENSGT00940000158278 #37	ENSGT00740000115581.e
Odontoceti_b	ANCESTRAL SPECIES	2	ENSGT00940000163398	ENSGT00940000153073.a	ENSGT00940000153073.b.b.b.b.z.a	ENSGT00940000166072.a	ENSGT00940000160147.a	ENSGT00940000163224.a	ENSGT00900000140957.B	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00910000148211	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141.i #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000161681 #36	ENSGT00940000158278 #37	ENSGT00740000115581.e
Monodontidae	ANCESTRAL SPECIES	15	ENSGT00940000153073.a	ENSGT00940000153073.b.b.b.b.z.a	ENSGT00940000166072.a	ENSGT00940000160147.a	ENSGT00940000163224.a	ENSGT00900000140957.B	ENSGT01060000251758	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00910000148211	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141.i #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000161681 #36	ENSGT00940000158278 #37	ENSGT00740000115581.e
Beluga whale	MODERN SPECIES	44	ENSDLEG00000010662	TRAV39 (ENSDLEG00000010632)	TRAV41 (ENSDLEG00000010617)	ENSDLEG00000010605	TRDV2 (ENSDLEG00000010592)	ENSDLEG00000010581	ENSDLEG00000010579	ENSDLEG00000010574	ENSDLEG00000010569 #15	DAD1 (ENSDLEG00000010565) #16	ABHD4 (ENSDLEG00000010554) #17	ENSDLEG00000020073 #18	OXA1L (ENSDLEG00000020068) #19	ENSDLEG00000020066	SLC7A7 (ENSDLEG00000020052) #20	MMP14 (ENSDLEG00000020044) #22	LRP10 (ENSDLEG00000020034) #23	REM2 (ENSDLEG00000020022) #24	RBM23 (ENSDLEG00000020009)	PRMT5 (ENSDLEG00000019993) #25	HAUS4 (ENSDLEG00000019987) #26	AJUBA (ENSDLEG00000019978) #27	CUNH14orf93 (ENSDLEG00000019974) #28	PSMB5 (ENSDLEG00000019970) #29	PSMB11 (ENSDLEG00000019969) #30	CDH24 (ENSDLEG00000019963) #31	ACIN1 (ENSDLEG00000019949) #34	CUNH14orf119 (ENSDLEG00000019946) #35	CEBPE (ENSDLEG00000019945) #36	SLC7A8 (ENSDLEG00000019937) #37	HOMEZ (ENSDLEG00000019935)
Narwhal	MODERN SPECIES	308	TRDV2 (ENSMMNG00015010423)	ENSMMNG00015010435	ENSMMNG00015010449	ENSMMNG00015010465	ENSMMNG00015010481 #15	ENSMMNG00015010494	ENSMMNG00015010496	ENSMMNG00015010503	DAD1 (ENSMMNG00015010510) #16	ABHD4 (ENSMMNG00015010536) #17	ENSMMNG00015010554	ENSMMNG00015010566 #18	OXA1L (ENSMMNG00015010592) #19	SLC7A7 (ENSMMNG00015010613) #20	MRPL52 (ENSMMNG00015010642) #21	MMP14 (ENSMMNG00015010687) #22	LRP10 (ENSMMNG00015010719) #23	REM2 (ENSMMNG00015010749) #24	RBM23 (ENSMMNG00015010808)	ENSMMNG00015010912 #25	HAUS4 (ENSMMNG00015011037) #26	AJUBA (ENSMMNG00015011080) #27	C14orf93 (ENSMMNG00015011104) #28	PSMB5 (ENSMMNG00015011131) #29	PSMB11 (ENSMMNG00015011153) #30	CDH24 (ENSMMNG00015011166) #31	ACIN1 (ENSMMNG00015011290) #34	C14orf119 (ENSMMNG00015011545) #35	CEBPE (ENSMMNG00015011555) #36	SLC7A8 (ENSMMNG00015011590) #37	RNF212B (ENSMMNG00015011655)
Vaquita	MODERN SPECIES	11	SALL2 (ENSPSNG00000015828)	OR4E2 (ENSPSNG00000016023)	ENSPSNG00000016908	ENSPSNG00000016934	ENSPSNG00000016967	ENSPSNG00000016997	ENSPSNG00000017047	ENSPSNG00000017063	ENSPSNG00000017099	ENSPSNG00000017223	DAD1 (ENSPSNG00000017483) #16	ABHD4 (ENSPSNG00000017542) #17	OXA1L (ENSPSNG00000018044) #19	SLC7A7 (ENSPSNG00000018124) #20	MRPL52 (ENSPSNG00000018228) #21	MMP14 (ENSPSNG00000018471) #22	LRP10 (ENSPSNG00000018527) #23	REM2 (ENSPSNG00000018592) #24	RBM23 (ENSPSNG00000018691)	PRMT5 (ENSPSNG00000018887) #25	HAUS4 (ENSPSNG00000019326) #26	AJUBA (ENSPSNG00000019351) #27	C14orf93 (ENSPSNG00000019391) #28	PSMB5 (ENSPSNG00000019535) #29	PSMB11 (ENSPSNG00000019602) #30	CDH24 (ENSPSNG00000019630) #31	ACIN1 (ENSPSNG00000019734) #34	C14orf119 (ENSPSNG00000020249) #35	CEBPE (ENSPSNG00000020268) #36	SLC7A8 (ENSPSNG00000020328) #37	RNF212B (ENSPSNG00000020470)
Dolphin	MODERN SPECIES	1193													OXA1L (ENSTTRG00000001494) #19	SLC7A7 (ENSTTRG00000001495) #20	MRPL52 (ENSTTRG00000001496) #21	MMP14 (ENSTTRG00000001497) #22	LRP10 (ENSTTRG00000001498) #23	REM2 (ENSTTRG00000001499) #24	RBM23 (ENSTTRG00000001500)	PRMT5 (ENSTTRG00000001501) #25	HAUS4 (ENSTTRG00000001502) #26	AJUBA (ENSTTRG00000001503) #27	C14orf93 (ENSTTRG00000001504) #28	PSMB5 (ENSTTRG00000001505) #29	PSMB11 (ENSTTRG00000001506) #30	CDH24 (ENSTTRG00000001507) #31	ACIN1 (ENSTTRG00000001508) #34	C14orf119 (ENSTTRG00000001509) #35
Sperm whale	MODERN SPECIES	1125													OXA1L (ENSPCTG00005021050) #19	SLC7A7 (ENSPCTG00005021154) #20	MRPL52 (ENSPCTG00005021206) #21	MMP14 (ENSPCTG00005021314) #22
Blue whale	MODERN SPECIES	11	TRAV17 (ENSBMSG00010009898)	ENSBMSG00010009903	TRAV20 (ENSBMSG00010009912)	ENSBMSG00010009925	ENSBMSG00010009934	ENSBMSG00010009948	TRAV41 (ENSBMSG00010009961)	ENSBMSG00010009999	ENSBMSG00010010041	DAD1 (ENSBMSG00010010053) #16	ABHD4 (ENSBMSG00010010078) #17	ENSBMSG00010010087	OXA1L (ENSBMSG00010010184) #19	SLC7A7 (ENSBMSG00010010209) #20	MRPL52 (ENSBMSG00010010235) #21	MMP14 (ENSBMSG00010010266) #22	LRP10 (ENSBMSG00010010297) #23	REM2 (ENSBMSG00010010327) #24	RBM23 (ENSBMSG00010010357)	PRMT5 (ENSBMSG00010010436) #25	HAUS4 (ENSBMSG00010010635) #26	AJUBA (ENSBMSG00010010676) #27	C14orf93 (ENSBMSG00010010696) #28	PSMB5 (ENSBMSG00010010731) #29	PSMB11 (ENSBMSG00010010746) #30	ACIN1 (ENSBMSG00010010863) #34	ENSBMSG00010010928	CEBPE (ENSBMSG00010010945) #36	SLC7A8 (ENSBMSG00010010980) #37	RNF212B (ENSBMSG00010011032)	HOMEZ (ENSBMSG00010011062)
Pecora	ANCESTRAL SPECIES	6	ENSGT00940000153402.d.b	ENSGT00520000055620.A	ENSGT00390000014495	ENSGT00940000153649.B	ENSGT00940000153886.a.a.k.b.a	ENSGT00940000154888	ENSGT00550000075058	ENSGT00940000162245	ENSGT00940000163708.d	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260011.B.m #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00910000145938	ENSGT00390000007438 #35	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Yarkand deer	MODERN SPECIES	3	ENSCHYG00000009578	OR4E2 (ENSCHYG00000009552)	OR4E1 (ENSCHYG00000009527)	ENSCHYG00000009499	TRDV2 (ENSCHYG00000009486)	ENSCHYG00000009457	TRDV3 (ENSCHYG00000020003)	ENSCHYG00000019884	ENSCHYG00000019819 #16	ABHD4 (ENSCHYG00000019707) #17	ENSCHYG00000019651	ENSCHYG00000019500	OXA1L (ENSCHYG00000019267) #19	ENSCHYG00000018959 #21	SLC7A7 (ENSCHYG00000018767) #20	MMP14 (ENSCHYG00000018620) #22	LRP10 (ENSCHYG00000018426) #23	REM2 (ENSCHYG00000018358) #24	RBM23 (ENSCHYG00000018246)	PRMT5 (ENSCHYG00000017109) #25	HAUS4 (ENSCHYG00000016879) #26	AJUBA (ENSCHYG00000016731) #27	C14orf93 (ENSCHYG00000016592) #28	ENSCHYG00000016436 #29	PSMB11 (ENSCHYG00000016390) #30	CDH24 (ENSCHYG00000016351) #31	ACIN1 (ENSCHYG00000015090) #34	ENSCHYG00000015000 #35	CEBPE (ENSCHYG00000014944) #36	SLC7A8 (ENSCHYG00000014686) #37	RNF212B (ENSCHYG00000014629)
Percora_a	ANCESTRAL SPECIES	8	ENSGT00940000153402.d.b	ENSGT00520000055620.A	ENSGT00390000014495	ENSGT00940000153649.B	ENSGT00940000153886.a.a.k.b.a	ENSGT00940000154888	ENSGT00550000075058	ENSGT00940000162245	ENSGT00940000163708.d	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260011.B.m #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00910000145938	ENSGT00390000007438 #35	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Bovidae	ANCESTRAL SPECIES	7	ENSGT00940000166072	ENSGT00940000164778	ENSGT00940000165951	ENSGT00550000075201	ENSGT00730000111639	ENSGT01080000258109	ENSGT00940000163708.d	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260011.B.n #18	ENSGT01090000260011.B.m.a #18	ENSGT01090000260011.B.m.b #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00910000145938	ENSGT00390000007438 #35	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Caprinae	ANCESTRAL SPECIES	30	ENSGT00940000153130.a.a.a.c.b.d	ENSGT00940000166072	ENSGT00940000165951	ENSGT00550000075201	ENSGT00730000111639	ENSGT01080000258109	ENSGT00940000163708.d	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260011.B.n #18	ENSGT01090000260011.B.m.a #18	ENSGT01090000260011.B.m.b #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00910000145938	ENSGT00390000007438 #35	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Goat	MODERN SPECIES	1	ENSCHIG00000017647	ENSCHIG00000013268	ENSCHIG00000006374	ENSCHIG00000012575	TRAV29DV5 (ENSCHIG00000014189)	TRAV26-2 (ENSCHIG00000014121)	TRAV36DV7 (ENSCHIG00000015670)	TRDC (ENSCHIG00000024517)	ENSCHIG00000012503	DAD1 (ENSCHIG00000017326) #16	ABHD4 (ENSCHIG00000005601) #17	ENSCHIG00000013184 #18	OXA1L (ENSCHIG00000022345) #19	SLC7A7 (ENSCHIG00000022436) #20	MRPL52 (ENSCHIG00000014047) #21	MMP14 (ENSCHIG00000011010) #22	RBM23 (ENSCHIG00000025709)	LRP10 (ENSCHIG00000003799) #23	REM2 (ENSCHIG00000012090) #24	PRMT5 (ENSCHIG00000016954) #25	HAUS4 (ENSCHIG00000019264) #26	AJUBA (ENSCHIG00000025926) #27	C14orf93 (ENSCHIG00000021325) #28	PSMB5 (ENSCHIG00000011511) #29	ENSCHIG00000024418	PSMB11 (ENSCHIG00000002806) #30	CDH24 (ENSCHIG00000012466) #31	ACIN1 (ENSCHIG00000017602) #34	C14orf119 (ENSCHIG00000003839) #35	CEBPE (ENSCHIG00000024067) #36	SLC7A8 (ENSCHIG00000007220) #37
Rambouillet Sheep	MODERN SPECIES	23	TRDC (ENSOARG00020011494)	TRDV3 (ENSOARG00020011466)	ENSOARG00020011448	ENSOARG00020011425	ENSOARG00020011409	ENSOARG00020011394	ENSOARG00020011258	DAD1 (ENSOARG00020011202) #16	ABHD4 (ENSOARG00020011057) #17	ENSOARG00020010895 #18	ENSOARG00020010842 #18	ENSOARG00020010800 #18	OXA1L (ENSOARG00020010686) #19	SLC7A7 (ENSOARG00020010417) #20	MRPL52 (ENSOARG00020010106) #21	MMP14 (ENSOARG00020009862) #22	LRP10 (ENSOARG00020019221) #23	REM2 (ENSOARG00020019163) #24	RBM23 (ENSOARG00020019058)	PRMT5 (ENSOARG00020017830) #25	HAUS4 (ENSOARG00020017603) #26	AJUBA (ENSOARG00020017465) #27	C14orf93 (ENSOARG00020017179) #28	PSMB5 (ENSOARG00020017060) #29	PSMB11 (ENSOARG00020016991) #30	CDH24 (ENSOARG00020016927) #31	ACIN1 (ENSOARG00020015623) #34	ENSOARG00020015537	C14orf119 (ENSOARG00020015511) #35	CEBPE (ENSOARG00020015485) #36	SLC7A8 (ENSOARG00020015163) #37
Bovinae	ANCESTRAL SPECIES	33	ENSGT00550000075201	ENSGT00730000111639	ENSGT01080000258412	ENSGT01060000251169	ENSGT00980000201440	ENSGT00940000163708.d	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00390000006178.s.b	ENSGT01090000260011.B.n #18	ENSGT01090000260011.B.m.a #18	ENSGT01090000260011.B.m.b.b #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000161681 #36	ENSGT00940000158278 #37	ENSGT00740000115581.e
Bos	ANCESTRAL SPECIES	31	ENSGT00940000153130.a.b.b.b	ENSGT01060000251169	ENSGT00980000201440	ENSGT00940000163708.d	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00390000006178.s.b	ENSGT01090000260011.B.n #18	ENSGT01090000260011.B.m.a.a.a #18	ENSGT01090000260011.B.m.b.a #18	ENSGT01090000260011.B.m.a.a.b #18	ENSGT01090000260011.B.m.b.b #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000161681 #36	ENSGT00940000158278 #37	ENSGT00740000115581.e
Bos_b	ANCESTRAL SPECIES	28	ENSGT00730000111639	ENSGT01080000258412	ENSGT00980000201440	ENSGT00940000163708.d	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00390000006178.s.b	ENSGT01090000260011.B.n #18	ENSGT01090000260011.B.m.a.a.a #18	ENSGT01090000260011.B.m.b.a #18	ENSGT01090000260011.B.m.a.a.b #18	ENSGT01090000260011.B.m.b.b #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000161681 #36	ENSGT00940000158278 #37	ENSGT00740000115581.e
Hybrid Bos Indicus	MODERN SPECIES	1	DAD1 (ENSBIXG00005006908) #16	ABHD4 (ENSBIXG00005004108) #17	ENSBIXG00005024022	ENSBIXG00005024036	ENSBIXG00005024043	ENSBIXG00005024069	ENSBIXG00005024078 #18	ENSBIXG00005024084 #18	ENSBIXG00005007079 #18	ENSBIXG00005004126 #18	ENSBIXG00005024155 #18	OXA1L (ENSBIXG00005024237) #19	ENSBIXG00005006520	SLC7A7 (ENSBIXG00005024321) #20	MRPL52 (ENSBIXG00005024443) #21	MMP14 (ENSBIXG00005024467) #22	LRP10 (ENSBIXG00005024520) #23	REM2 (ENSBIXG00005024566) #24	RBM23 (ENSBIXG00005024618)	PRMT5 (ENSBIXG00005024744) #25	HAUS4 (ENSBIXG00005024881) #26	AJUBA (ENSBIXG00005024958) #27	C14orf93 (ENSBIXG00005025024) #28	PSMB5 (ENSBIXG00005025051) #29	CDH24 (ENSBIXG00005025077) #31	PSMB11 (ENSBIXG00005025093) #30	ACIN1 (ENSBIXG00005025385) #34	ENSBIXG00005025429 #35	CEBPE (ENSBIXG00005025442) #36	SLC7A8 (ENSBIXG00005025555) #37	HOMEZ (ENSBIXG00005025580)
Cow	MODERN SPECIES	1	ENSBTAG00000050128	ENSBTAG00000050828	ENSBTAG00000054785	ENSBTAG00000000432	DAD1 (ENSBTAG00000019077) #16	ABHD4 (ENSBTAG00000016658) #17	ENSBTAG00000009274	OR6E1E (ENSBTAG00000051691) #18	OR6E1 (ENSBTAG00000050326) #18	OR6E1C (ENSBTAG00000054564) #18	OR6E1B (ENSBTAG00000052423) #18	OR6E1D (ENSBTAG00000052080) #18	OXA1L (ENSBTAG00000014820) #19	SLC7A7 (ENSBTAG00000014821) #20	MRPL52 (ENSBTAG00000014822) #21	MMP14 (ENSBTAG00000014824) #22	LRP10 (ENSBTAG00000016378) #23	REM2 (ENSBTAG00000016381) #24	RBM23 (ENSBTAG00000038333)	PRMT5 (ENSBTAG00000010890) #25	HAUS4 (ENSBTAG00000012723) #26	AJUBA (ENSBTAG00000012724) #27	C10H14orf93 (ENSBTAG00000012725) #28	PSMB5 (ENSBTAG00000012726) #29	PSMB11 (ENSBTAG00000054080) #30	CDH24 (ENSBTAG00000011349) #31	ACIN1 (ENSBTAG00000011571) #34	C10H14orf119 (ENSBTAG00000047027) #35	CEBPE (ENSBTAG00000005952) #36	SLC7A8 (ENSBTAG00000007415) #37	RNF212B (ENSBTAG00000025755)
Bos_a	ANCESTRAL SPECIES	40					ENSGT01060000251169	ENSGT00980000201440	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00950000183087.A.a.a.a.b.a	ENSGT00390000006178.s.b	ENSGT01090000260011.B.m.a.a.b #18	ENSGT01090000260011.B.n #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000161681 #36	ENSGT00940000158278 #37	ENSGT00740000115581.e
Wild yak	MODERN SPECIES	723	ENSBMUG00000019192	ENSBMUG00000019180	ENSBMUG00000019162	ENSBMUG00000019142	ENSBMUG00000019123	ENSBMUG00000019107	ENSBMUG00000019081	DAD1 (ENSBMUG00000019046) #16	ABHD4 (ENSBMUG00000019028) #17	ENSBMUG00000019015	ENSBMUG00000019005	ENSBMUG00000018990 #18	OXA1L (ENSBMUG00000018974) #19	SLC7A7 (ENSBMUG00000018917) #20	MRPL52 (ENSBMUG00000018880) #21	MMP14 (ENSBMUG00000018824) #22	LRP10 (ENSBMUG00000018763) #23	REM2 (ENSBMUG00000018707) #24	RBM23 (ENSBMUG00000018668)	PRMT5 (ENSBMUG00000018509) #25	HAUS4 (ENSBMUG00000018324) #26	AJUBA (ENSBMUG00000018267) #27	C14orf93 (ENSBMUG00000018246) #28	PSMB5 (ENSBMUG00000018220) #29	PSMB11 (ENSBMUG00000018210) #30	CDH24 (ENSBMUG00000018198) #31	ACIN1 (ENSBMUG00000018068) #34	ENSBMUG00000017829 #35	CEBPE (ENSBMUG00000017817) #36	SLC7A8 (ENSBMUG00000017781) #37	RNF212B (ENSBMUG00000017625)
Domestic yak	MODERN SPECIES	2	ENSBGRG00000008096	ENSBGRG00000008146	ENSBGRG00000008157	ENSBGRG00000008164	ENSBGRG00000008175	DAD1 (ENSBGRG00000008204) #16	ABHD4 (ENSBGRG00000008271) #17	ENSBGRG00000008380	ENSBGRG00000003626	ENSBGRG00000003650	ENSBGRG00000003678 #18	ENSBGRG00000003690 #18	OXA1L (ENSBGRG00000003716) #19	SLC7A7 (ENSBGRG00000003777) #20	MRPL52 (ENSBGRG00000003895) #21	MMP14 (ENSBGRG00000004010) #22	LRP10 (ENSBGRG00000004081) #23	REM2 (ENSBGRG00000004119) #24	RBM23 (ENSBGRG00000004216)	PRMT5 (ENSBGRG00000004439) #25	HAUS4 (ENSBGRG00000005108) #26	AJUBA (ENSBGRG00000005204) #27	C14orf93 (ENSBGRG00000005326) #28	PSMB5 (ENSBGRG00000005400) #29	PSMB11 (ENSBGRG00000005418) #30	CDH24 (ENSBGRG00000005438) #31	ACIN1 (ENSBGRG00000005584) #34	ENSBGRG00000006584 #35	CEBPE (ENSBGRG00000006600) #36	SLC7A8 (ENSBGRG00000006627) #37	RNF212B (ENSBGRG00000006773)
American bison	MODERN SPECIES	3371	ENSBBBG00000024211	ENSBBBG00000024207	ENSBBBG00000006296	DAD1 (ENSBBBG00000024198) #16	ABHD4 (ENSBBBG00000008871) #17	ENSBBBG00000024178	ENSBBBG00000024170	ENSBBBG00000008646	ENSBBBG00000024153	ENSBBBG00000008981 #18	ENSBBBG00000024137 #18	ENSBBBG00000024134 #18	OXA1L (ENSBBBG00000024118) #19	SLC7A7 (ENSBBBG00000024018) #20	MRPL52 (ENSBBBG00000023959) #21	MMP14 (ENSBBBG00000023905) #22	LRP10 (ENSBBBG00000000301) #23	REM2 (ENSBBBG00000008315) #24	RBM23 (ENSBBBG00000006214)	PRMT5 (ENSBBBG00000023731) #25	HAUS4 (ENSBBBG00000023502) #26	AJUBA (ENSBBBG00000023373) #27	C14orf93 (ENSBBBG00000023354) #28	ENSBBBG00000006094 #29	PSMB11 (ENSBBBG00000023294) #30	CDH24 (ENSBBBG00000023286) #31	ACIN1 (ENSBBBG00000023242) #34	C14orf119 (ENSBBBG00000023052) #35	CEBPE (ENSBBBG00000023047) #36	SLC7A8 (ENSBBBG00000006044) #37	RNF212B (ENSBBBG00000006030)
Siberian musk deer	MODERN SPECIES	71	ENSMMSG00000003520	TRDV3 (ENSMMSG00000003515)	ENSMMSG00000003477	DAD1 (ENSMMSG00000003453) #16	ABHD4 (ENSMMSG00000003438) #17	ENSMMSG00000003428	ENSMMSG00000003418	ENSMMSG00000003410	ENSMMSG00000003399 #18	ENSMMSG00000003376 #18	ENSMMSG00000003366 #18	ENSMMSG00000003356 #18	OXA1L (ENSMMSG00000003331) #19	SLC7A7 (ENSMMSG00000003307) #20	MRPL52 (ENSMMSG00000003274) #21	MMP14 (ENSMMSG00000003242) #22	LRP10 (ENSMMSG00000003220) #23	REM2 (ENSMMSG00000003202) #24	RBM23 (ENSMMSG00000003104)	PRMT5 (ENSMMSG00000002569) #25	HAUS4 (ENSMMSG00000002467) #26	AJUBA (ENSMMSG00000002391) #27	C14orf93 (ENSMMSG00000002348) #28	PSMB5 (ENSMMSG00000002310) #29	PSMB11 (ENSMMSG00000002294) #30	CDH24 (ENSMMSG00000002274) #31	ACIN1 (ENSMMSG00000002178) #34	CEBPE (ENSMMSG00000002146) #36	SLC7A8 (ENSMMSG00000002101) #37	ENSMMSG00000002086	RNF212B (ENSMMSG00000002057)
Laurasiatheria_b	ANCESTRAL SPECIES	3	ENSGT00940000153886.a.a.k	ENSGT00940000154888	ENSGT00550000075058	ENSGT00910000147451	ENSGT00940000162245	ENSGT01050000244869.a.b.b	ENSGT01050000244869.a.b.a	ENSGT00940000170768	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00910000148211	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00910000145938	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36
Carnivora	ANCESTRAL SPECIES		ENSGT00940000166072	ENSGT00940000160147.a	ENSGT00940000164778	ENSGT00920000149497	ENSGT00900000140957.B	ENSGT00550000075201	ENSGT00730000111639	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00910000148211	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Caniformia	ANCESTRAL SPECIES	15	ENSGT00940000160183.d.a	ENSGT00940000166072	ENSGT00940000160147.a	ENSGT00900000140957.B	ENSGT00940000164778	ENSGT00550000075201	ENSGT00730000111639	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00910000148211	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Caniformia_b	ANCESTRAL SPECIES	14	ENSGT00940000153130.a.a.a.c.b	ENSGT00940000162524.A	ENSGT00940000162840.C	ENSGT00940000153130.a.b.a.a.b	ENSGT00940000160183.d.a	ENSGT00940000166072	ENSGT00550000075201	ENSGT00730000111639	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438.o.b #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Ursidae	ANCESTRAL SPECIES	10						ENSGT00550000075201	ENSGT00730000111639	ENSGT01020000232693	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841.j #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438.o.b #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Ursus	ANCESTRAL SPECIES	140								ENSGT01050000245453	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841.j #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438.o.b #35	ENSGT00940000161681 #36	ENSGT00940000158278 #37	ENSGT00950000182893.a.b
American black bear	MODERN SPECIES	2436								TRAJ18 (ENSUAMG00000022559)	ENSUAMG00000022561 #15	DAD1 (ENSUAMG00000022566) #16	ABHD4 (ENSUAMG00000022567) #17	ENSUAMG00000022571 #18	OXA1L (ENSUAMG00000022573) #19	SLC7A7 (ENSUAMG00000022575) #20	MRPL52 (ENSUAMG00000022578) #21	MMP14 (ENSUAMG00000022581) #22
Polar bear	MODERN SPECIES	427							ENSUMAG00000013968 #15	ENSUMAG00000013970	ENSUMAG00000013972	DAD1 (ENSUMAG00000013974) #16	ABHD4 (ENSUMAG00000013975) #17	ENSUMAG00000013983 #18	OXA1L (ENSUMAG00000013987) #19	SLC7A7 (ENSUMAG00000013991) #20	ENSUMAG00000014007 #21	MMP14 (ENSUMAG00000014016) #22	REM2 (ENSUMAG00000014074) #24	RBM23 (ENSUMAG00000014075)	PRMT5 (ENSUMAG00000014079) #25	HAUS4 (ENSUMAG00000014089) #26	ENSUMAG00000014092 #27	C14orf93 (ENSUMAG00000014095) #28	PSMB5 (ENSUMAG00000014101) #29	ENSUMAG00000014103 #30	CDH24 (ENSUMAG00000014114) #31	ACIN1 (ENSUMAG00000014156) #34	ENSUMAG00000014175 #35	CEBPE (ENSUMAG00000014178) #36	SLC7A8 (ENSUMAG00000014195) #37	HOMEZ (ENSUMAG00000014285)	PABPN1 (ENSUMAG00000014288)
Giant Panda	MODERN SPECIES	12	ENSAMEG00000023771	ENSAMEG00000030541	ENSAMEG00000007133	ENSAMEG00000029177 #15	TRDV3 (ENSAMEG00000007139)	ENSAMEG00000024698	ENSAMEG00000024270	ENSAMEG00000027441	ENSAMEG00000027810 #15	DAD1 (ENSAMEG00000024890) #16	ABHD4 (ENSAMEG00000007159) #17	ENSAMEG00000007183 #18	OXA1L (ENSAMEG00000007188) #19	SLC7A7 (ENSAMEG00000007223) #20	MRPL52 (ENSAMEG00000029738) #21	MMP14 (ENSAMEG00000007272) #22	LRP10 (ENSAMEG00000007296) #23	REM2 (ENSAMEG00000007306) #24	RBM23 (ENSAMEG00000007322)	PRMT5 (ENSAMEG00000007355) #25	HAUS4 (ENSAMEG00000007432) #26	AJUBA (ENSAMEG00000007445) #27	C14orf93 (ENSAMEG00000007462) #28	PSMB5 (ENSAMEG00000028497) #29	ENSAMEG00000030268 #30	CDH24 (ENSAMEG00000007481) #31	ACIN1 (ENSAMEG00000007576) #34	ENSAMEG00000028908 #35	CIROP (ENSAMEG00000024817)	CEBPE (ENSAMEG00000024230) #36	SLC7A8 (ENSAMEG00000007631) #37
Mustelinae	ANCESTRAL SPECIES	32	ENSGT00940000153130.a.a.a.c.b	ENSGT00940000162840.C	ENSGT00940000153130.a.b.a.a.b	ENSGT00940000160183.d.a	ENSGT00940000166072	ENSGT00550000075201	ENSGT00730000111639	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260011.B.b #18	ENSGT01090000260011.B.a #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438.o.b #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Ferret	MODERN SPECIES	210	TRAV26-2 (ENSMPUG00000007358)	ENSMPUG00000007342	ENSMPUG00000007338	TRAV41 (ENSMPUG00000007333)	ENSMPUG00000007328	TRDC (ENSMPUG00000007319)	TRDV3 (ENSMPUG00000018887)	ENSMPUG00000007297 #15	DAD1 (ENSMPUG00000007289) #16	ABHD4 (ENSMPUG00000007277) #17	ENSMPUG00000018882 #18	ENSMPUG00000018879 #18	OXA1L (ENSMPUG00000007269) #19	MRPL52 (ENSMPUG00000007234) #21	SLC7A7 (ENSMPUG00000007228) #20	MMP14 (ENSMPUG00000007212) #22	LRP10 (ENSMPUG00000007201) #23	REM2 (ENSMPUG00000007167) #24	RBM23 (ENSMPUG00000007151)	PRMT5 (ENSMPUG00000007137) #25	HAUS4 (ENSMPUG00000007129) #26	AJUBA (ENSMPUG00000007116) #27	C14orf93 (ENSMPUG00000007064) #28	PSMB5 (ENSMPUG00000007019) #29	PSMB11 (ENSMPUG00000018875) #30	CDH24 (ENSMPUG00000006830) #31	ACIN1 (ENSMPUG00000006822) #34	ENSMPUG00000006818 #35	CEBPE (ENSMPUG00000006815) #36	SLC7A8 (ENSMPUG00000006807) #37	HOMEZ (ENSMPUG00000006797)
American mink	MODERN SPECIES	148	ENSNVIG00000020454	ENSNVIG00000020457	ENSNVIG00000020461	ENSNVIG00000020479	ENSNVIG00000020573	ENSNVIG00000020584	ENSNVIG00000020585	ENSNVIG00000020594	DAD1 (ENSNVIG00000020599) #16	ABHD4 (ENSNVIG00000020605) #17	ENSNVIG00000020633 #18	ENSNVIG00000020641 #18	OXA1L (ENSNVIG00000020650) #19	SLC7A7 (ENSNVIG00000020676) #20	MRPL52 (ENSNVIG00000020698) #21	MMP14 (ENSNVIG00000020727) #22	LRP10 (ENSNVIG00000020742) #23	REM2 (ENSNVIG00000020767) #24	RBM23 (ENSNVIG00000020783)	PRMT5 (ENSNVIG00000020831) #25	HAUS4 (ENSNVIG00000020969) #26	AJUBA (ENSNVIG00000021037) #27	C14orf93 (ENSNVIG00000021065) #28	PSMB5 (ENSNVIG00000021100) #29	PSMB11 (ENSNVIG00000021111) #30	CDH24 (ENSNVIG00000021117) #31	ACIN1 (ENSNVIG00000021153) #34	ENSNVIG00000021211 #35	CIROP (ENSNVIG00000021223)	CEBPE (ENSNVIG00000021255) #36	SLC7A8 (ENSNVIG00000021267) #37
Canidae	ANCESTRAL SPECIES	4	ENSGT00940000164778	ENSGT00550000075201	ENSGT00730000111639	ENSGT00980000202431	ENSGT00990000206538	ENSGT01100000265770	ENSGT00950000186438	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00910000148211	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438.n #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Canis_lupus	ANCESTRAL SPECIES	8	ENSGT00940000164778	ENSGT00550000075201	ENSGT00730000111639	ENSGT00980000202431	ENSGT00990000206538	ENSGT01100000265770	ENSGT00950000186438	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00910000148211	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438.n #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Dingo	MODERN SPECIES	161	ENSCAFG00020007917	TRDC (ENSCAFG00020007910)	ENSCAFG00020007905	ENSCAFG00020007903	ENSCAFG00020007902	ENSCAFG00020007900	ENSCAFG00020007898	ENSCAFG00020007875 #15	DAD1 (ENSCAFG00020007850) #16	ABHD4 (ENSCAFG00020007841) #17	ENSCAFG00020007839	ENSCAFG00020007834 #18	OXA1L (ENSCAFG00020007825) #19	SLC7A7 (ENSCAFG00020007817) #20	MRPL52 (ENSCAFG00020007772) #21	MMP14 (ENSCAFG00020007758) #22	LRP10 (ENSCAFG00020007743) #23	REM2 (ENSCAFG00020007720) #24	RBM23 (ENSCAFG00020007711)	ENSCAFG00020007707	PRMT5 (ENSCAFG00020007687) #25	HAUS4 (ENSCAFG00020007681) #26	AJUBA (ENSCAFG00020007676) #27	C14orf93 (ENSCAFG00020007664) #28	PSMB5 (ENSCAFG00020007663) #29	PSMB11 (ENSCAFG00020007662) #30	CDH24 (ENSCAFG00020007655) #31	ACIN1 (ENSCAFG00020007637) #34	ENSCAFG00020007615 #35	CEBPE (ENSCAFG00020007607) #36	SLC7A8 (ENSCAFG00020006729) #37
Dog	MODERN SPECIES	36	TRDV3 (ENSCAFG00845001727)	ENSCAFG00845001743	ENSCAFG00845001753	ENSCAFG00845001757	ENSCAFG00845001774	ENSCAFG00845001794	ENSCAFG00845001837	ENSCAFG00845001851 #15	DAD1 (ENSCAFG00845001882) #16	ABHD4 (ENSCAFG00845001920) #17	ENSCAFG00845001954	OR6E1 (ENSCAFG00845001980) #18	OXA1L (ENSCAFG00845002006) #19	ENSCAFG00845002028 #20	MRPL52 (ENSCAFG00845002067) #21	MMP14 (ENSCAFG00845002121) #22	LRP10 (ENSCAFG00845002154) #23	RBM23 (ENSCAFG00845002223)	PRMT5 (ENSCAFG00845002461) #25	AJUBA (ENSCAFG00845002700) #27	C8H14orf93 (ENSCAFG00845002874) #28	PSMB5 (ENSCAFG00845002902) #29	PSMB11 (ENSCAFG00845002924) #30	CDH24 (ENSCAFG00845002943) #31	ACIN1 (ENSCAFG00845002998) #34	C8H14orf119 (ENSCAFG00845003119) #35	CIROP (ENSCAFG00845003141)	CEBPE (ENSCAFG00845003168) #36	SLC7A8 (ENSCAFG00845003216) #37	ENSCAFG00845003263	RNF212B (ENSCAFG00845003276)
Red fox	MODERN SPECIES	65			TRDC (ENSVVUG00000019759)	ENSVVUG00000019761	ENSVVUG00000019762	ENSVVUG00000019763	ENSVVUG00000019766	DAD1 (ENSVVUG00000019768) #16	ENSVVUG00000019773 #15	ABHD4 (ENSVVUG00000019775) #17	ENSVVUG00000019779	ENSVVUG00000019784 #18	OXA1L (ENSVVUG00000019787) #19	SLC7A7 (ENSVVUG00000019789) #20	ENSVVUG00000019793 #21	MMP14 (ENSVVUG00000019794) #22	LRP10 (ENSVVUG00000019801) #23	REM2 (ENSVVUG00000019805) #24	RBM23 (ENSVVUG00000019815)	PRMT5 (ENSVVUG00000019817) #25	HAUS4 (ENSVVUG00000019820) #26	AJUBA (ENSVVUG00000019846) #27	CUNH14orf93 (ENSVVUG00000019857) #28	PSMB5 (ENSVVUG00000019863) #29	PSMB11 (ENSVVUG00000019870) #30	CDH24 (ENSVVUG00000019873) #31	ACIN1 (ENSVVUG00000019885) #34	CUNH14orf119 (ENSVVUG00000019893) #35	CEBPE (ENSVVUG00000019900) #36	SLC7A8 (ENSVVUG00000019902) #37	ENSVVUG00000019904
Felidae	ANCESTRAL SPECIES	1	ENSGT00940000162524.A	ENSGT00900000140957.C	ENSGT00940000160183.d.a	ENSGT00940000160147.a	ENSGT00900000140957.B	ENSGT00550000075201	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00910000148211	ENSGT01090000260011.B.d #18	ENSGT01090000260011.B.c #18	ENSGT00530000063506.B #19	ENSGT00940000160134.e #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Panthera	ANCESTRAL SPECIES	3	ENSGT00940000161790	ENSGT00940000162524.A	ENSGT00900000140957.C	ENSGT00940000160183.d.a	ENSGT00940000160147.a	ENSGT00900000140957.B	ENSGT00550000075201	ENSGT00940000160147.b	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260011.B.d #18	ENSGT01090000260011.B.c #18	ENSGT00530000063506.B #19	ENSGT00940000160134.e #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Panthera_a	ANCESTRAL SPECIES	7	ENSGT00940000161790	ENSGT00940000162524.A	ENSGT00900000140957.C	ENSGT00940000160183.d.a	ENSGT00940000160147.a.e	ENSGT00940000170768	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260011.B.d #18	ENSGT01090000260011.B.c #18	ENSGT00910000148211	ENSGT00530000063506.B #19	ENSGT00940000160134.e #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
leopard	MODERN SPECIES	124													OXA1L (ENSPPRG00000013399) #19	ENSPPRG00000013920 #20	MRPL52 (ENSPPRG00000018903) #21	MMP14 (ENSPPRG00000022165) #22	LRP10 (ENSPPRG00000024480) #23	REM2 (ENSPPRG00000024243) #24	RBM23 (ENSPPRG00000023344)	PRMT5 (ENSPPRG00000003162) #25	HAUS4 (ENSPPRG00000009505) #26	ENSPPRG00000011047 #27	C14orf93 (ENSPPRG00000013008) #28	PSMB5 (ENSPPRG00000015249) #29	PSMB11 (ENSPPRG00000018049) #30	CDH24 (ENSPPRG00000000260) #31	ACIN1 (ENSPPRG00000006713) #34	C14orf119 (ENSPPRG00000018397) #35	CIROP (ENSPPRG00000007607)	CEBPE (ENSPPRG00000007809) #36	SLC7A8 (ENSPPRG00000009279) #37
lion	MODERN SPECIES	6	ENSPLOG00000010675	ENSPLOG00000010699	ENSPLOG00000010709	ENSPLOG00000010736	ENSPLOG00000010828	TRAV41 (ENSPLOG00000010870)	ENSPLOG00000008497	ENSPLOG00000008643	TRDC (ENSPLOG00000009139)	ENSPLOG00000009186 #16	ABHD4 (ENSPLOG00000009213) #17	ENSPLOG00000009334	OXA1L (ENSPLOG00000009362) #19	SLC7A7 (ENSPLOG00000009515) #20	MRPL52 (ENSPLOG00000009555) #21	MMP14 (ENSPLOG00000009721) #22	LRP10 (ENSPLOG00000009786) #23	REM2 (ENSPLOG00000009863) #24	RBM23 (ENSPLOG00000009954)	PRMT5 (ENSPLOG00000010113) #25	HAUS4 (ENSPLOG00000010383) #26	AJUBA (ENSPLOG00000010481) #27	C14orf93 (ENSPLOG00000010622) #28	PSMB5 (ENSPLOG00000010681) #29	PSMB11 (ENSPLOG00000010711) #30	CDH24 (ENSPLOG00000010755) #31	ACIN1 (ENSPLOG00000010973) #34	C14orf119 (ENSPLOG00000011859) #35	CIROP (ENSPLOG00000011882)	CEBPE (ENSPLOG00000012017) #36	SLC7A8 (ENSPLOG00000012071) #37
Tiger	MODERN SPECIES	578			ENSPTIG00000017571	TRAV27 (ENSPTIG00000018322)	TRAV29DV5 (ENSPTIG00000018359)	ENSPTIG00000018735	ENSPTIG00000001852 #15	DAD1 (ENSPTIG00000005259) #16	ABHD4 (ENSPTIG00000006336) #17	ENSPTIG00000006751 #18	ENSPTIG00000006755 #18	ENSPTIG00000006761 #18	OXA1L (ENSPTIG00000011174) #19	SLC7A7 (ENSPTIG00000013224) #20	MRPL52 (ENSPTIG00000015624) #21	MMP14 (ENSPTIG00000018375) #22	LRP10 (ENSPTIG00000019760) #23	REM2 (ENSPTIG00000021000) #24	RBM23 (ENSPTIG00000007831)	PRMT5 (ENSPTIG00000014268) #25	HAUS4 (ENSPTIG00000008583) #26	ENSPTIG00000013120 #27	C14orf93 (ENSPTIG00000013979) #28	PSMB5 (ENSPTIG00000016003) #29	PSMB11 (ENSPTIG00000007360) #30	CDH24 (ENSPTIG00000017572) #31	ACIN1 (ENSPTIG00000021540) #34	C14orf119 (ENSPTIG00000000313) #35	CIROP (ENSPTIG00000013858)	CEBPE (ENSPTIG00000015005) #36	SLC7A8 (ENSPTIG00000015656) #37
Cat	MODERN SPECIES	237	TRAV40 (ENSFCAG00000047365)	TRAV41 (ENSFCAG00000052720)	ENSFCAG00000053669	ENSFCAG00000031436 #15	ENSFCAG00000041658	ENSFCAG00000041607	ENSFCAG00000040169	DAD1 (ENSFCAG00000029121) #16	ABHD4 (ENSFCAG00000003046) #17	ENSFCAG00000049819	ENSFCAG00000052623 #18	ENSFCAG00000022681 #18	OXA1L (ENSFCAG00000006623) #19	SLC7A7 (ENSFCAG00000024866) #20	MRPL52 (ENSFCAG00000006625) #21	MMP14 (ENSFCAG00000006626) #22	LRP10 (ENSFCAG00000006628) #23	REM2 (ENSFCAG00000006630) #24	PRMT5 (ENSFCAG00000006636) #25	HAUS4 (ENSFCAG00000006639) #26	AJUBA (ENSFCAG00000006641) #27	CB3H14orf93 (ENSFCAG00000006642) #28	PSMB5 (ENSFCAG00000023593) #29	PSMB11 (ENSFCAG00000008111) #30	CDH24 (ENSFCAG00000002331) #31	ACIN1 (ENSFCAG00000002332) #34	CB3H14orf119 (ENSFCAG00000002333) #35	CIROP (ENSFCAG00000045976)	CEBPE (ENSFCAG00000002334) #36	SLC7A8 (ENSFCAG00000002335) #37	RNF212B (ENSFCAG00000018703)
Laurasiatheria_c	ANCESTRAL SPECIES	1	ENSGT00900000140957.B	ENSGT00940000164778	ENSGT00940000165951	ENSGT00550000075201	ENSGT00730000111639	ENSGT01070000257199	ENSGT01100000264510	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00910000148211	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00910000145938	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36
Chiroptera	ANCESTRAL SPECIES	34	ENSGT00940000166072	ENSGT00940000160147.a	ENSGT00900000140957.B	ENSGT00940000164778	ENSGT00940000165951	ENSGT00550000075201	ENSGT00730000111639	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00910000148211	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00910000145938	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36
Microchiroptera	ANCESTRAL SPECIES	29	ENSGT00940000166072	ENSGT00940000160147.a	ENSGT00900000140957.B	ENSGT00940000164778	ENSGT00940000165951	ENSGT00550000075201	ENSGT00730000111639	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT00910000148211	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00910000145938	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36
Greater horseshoe bat	MODERN SPECIES	24	ENSRFEG00010000578	ENSRFEG00010000592	ENSRFEG00010000597	ENSRFEG00010000606	ENSRFEG00010000611	ENSRFEG00010000621 #15	DAD1 (ENSRFEG00010000633) #16	ABHD4 (ENSRFEG00010000649) #17	ENSRFEG00010000659	ENSRFEG00010000679 #18	ENSRFEG00010000692 #18	ENSRFEG00010000700	OXA1L (ENSRFEG00010000726) #19	SLC7A7 (ENSRFEG00010000765) #20	MRPL52 (ENSRFEG00010000802) #21	MMP14 (ENSRFEG00010000831) #22	LRP10 (ENSRFEG00010000869) #23	REM2 (ENSRFEG00010000938) #24	RBM23 (ENSRFEG00010000986)	PRMT5 (ENSRFEG00010001074) #25	AJUBA (ENSRFEG00010001220) #27	C14orf93 (ENSRFEG00010001313) #28	PSMB5 (ENSRFEG00010001359) #29	PSMB11 (ENSRFEG00010001392) #30	CDH24 (ENSRFEG00010001405) #31	ACIN1 (ENSRFEG00010001457) #34	ENSRFEG00010001579	C14orf119 (ENSRFEG00010001593) #35	CIROP (ENSRFEG00010001605)	CEBPE (ENSRFEG00010001653) #36	SLC7A8 (ENSRFEG00010001689) #37
Microbat	MODERN SPECIES	1234	ENSMLUG00000025899	ENSMLUG00000030412	TRAV41 (ENSMLUG00000025529)	ENSMLUG00000025096	ENSMLUG00000027186	TRDV3 (ENSMLUG00000025256)	ENSMLUG00000003366 #15	DAD1 (ENSMLUG00000003801) #16	ENSMLUG00000027893	ABHD4 (ENSMLUG00000003815) #17	ENSMLUG00000023468 #18	ENSMLUG00000028266	OXA1L (ENSMLUG00000012893) #19	SLC7A7 (ENSMLUG00000012899) #20	MRPL52 (ENSMLUG00000012904) #21	MMP14 (ENSMLUG00000012908) #22	LRP10 (ENSMLUG00000012915) #23	REM2 (ENSMLUG00000012919) #24	RBM23 (ENSMLUG00000012923)	PRMT5 (ENSMLUG00000012929) #25	HAUS4 (ENSMLUG00000012934) #26	AJUBA (ENSMLUG00000012944) #27	C14orf93 (ENSMLUG00000014274) #28	PSMB5 (ENSMLUG00000014281) #29	PSMB11 (ENSMLUG00000014282) #30	CDH24 (ENSMLUG00000004874) #31	ACIN1 (ENSMLUG00000004891) #34	C14orf119 (ENSMLUG00000004911) #35	CEBPE (ENSMLUG00000030209) #36	SLC7A8 (ENSMLUG00000004913) #37	ENSMLUG00000028154
Megabat	MODERN SPECIES	1524													OXA1L (ENSPVAG00000013777) #19	SLC7A7 (ENSPVAG00000013778) #20	MRPL52 (ENSPVAG00000013780) #21	MMP14 (ENSPVAG00000013782) #22	LRP10 (ENSPVAG00000013783) #23	REM2 (ENSPVAG00000013784) #24	RBM23 (ENSPVAG00000013785)	PRMT5 (ENSPVAG00000013786) #25	HAUS4 (ENSPVAG00000013790) #26	AJUBA (ENSPVAG00000013795) #27	C14orf93 (ENSPVAG00000013798) #28	PSMB5 (ENSPVAG00000013800) #29	PSMB11 (ENSPVAG00000013801) #30	CDH24 (ENSPVAG00000013803) #31	ACIN1 (ENSPVAG00000013806) #34
Equus	ANCESTRAL SPECIES	45	ENSGT00940000164778	ENSGT00940000165951	ENSGT00550000075201	ENSGT00730000111639	ENSGT01070000257199	ENSGT01100000264510	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260011.B.e.a.a #18	ENSGT01090000260011.B.f #18	ENSGT01090000260011.B.e.a.b #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Horse	MODERN SPECIES		ENSECAG00000032312	ENSECAG00000054130	ENSECAG00000042547	TRDC (ENSECAG00000028590)	TRDV3 (ENSECAG00000057927)	ENSECAG00000032324	ENSECAG00000035225	DAD1 (ENSECAG00000000577) #16	ABHD4 (ENSECAG00000002199) #17	ENSECAG00000051878 #18	OR6E1 (ENSECAG00000058804) #18	ENSECAG00000047830 #18	OXA1L (ENSECAG00000015615) #19	SLC7A7 (ENSECAG00000001058) #20	MRPL52 (ENSECAG00000000019) #21	MMP14 (ENSECAG00000008351) #22	LRP10 (ENSECAG00000022955) #23	REM2 (ENSECAG00000009873) #24	RBM23 (ENSECAG00000009910)	PRMT5 (ENSECAG00000014516) #25	HAUS4 (ENSECAG00000007197) #26	PSMB11 (ENSECAG00000004095) #30	AJUBA (ENSECAG00000009971) #27	C1H14orf93 (ENSECAG00000015564) #28	PSMB5 (ENSECAG00000017123) #29	CDH24 (ENSECAG00000019730) #31	ACIN1 (ENSECAG00000021097) #34	C1H14orf119 (ENSECAG00000011537) #35	CIROP (ENSECAG00000042315)	CEBPE (ENSECAG00000012883) #36	SLC7A8 (ENSECAG00000013723) #37
Donkey	MODERN SPECIES	11	ENSEASG00005011674	ENSEASG00005024428	ENSEASG00005037177	ENSEASG00005033431	ENSEASG00005027981	ENSEASG00005011676 #16	ABHD4 (ENSEASG00005011678) #17	ENSEASG00005025894 #18	ENSEASG00005024128 #18	ENSEASG00005035945 #18	ENSEASG00005036585 #18	ENSEASG00005031145 #18	OXA1L (ENSEASG00005011687) #19	SLC7A7 (ENSEASG00005011689) #20	MRPL52 (ENSEASG00005011690) #21	MMP14 (ENSEASG00005011691) #22	LRP10 (ENSEASG00005011693) #23	REM2 (ENSEASG00005011695) #24	RBM23 (ENSEASG00005011696)	PRMT5 (ENSEASG00005011697) #25	HAUS4 (ENSEASG00005011698) #26	AJUBA (ENSEASG00005011699) #27	C14orf93 (ENSEASG00005011700) #28	PSMB5 (ENSEASG00005011701) #29	PSMB11 (ENSEASG00005011702) #30	CDH24 (ENSEASG00005011703) #31	ACIN1 (ENSEASG00005011704) #34	C14orf119 (ENSEASG00005025427) #35	CIROP (ENSEASG00005027450)	CEBPE (ENSEASG00005011707) #36	SLC7A8 (ENSEASG00005011709) #37
Eulipotyphla	ANCESTRAL SPECIES	29															ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28
Hedgehog	MODERN SPECIES	12175																MMP14 (ENSEEUG00000014260) #22
Common shrew	MODERN SPECIES	5281															MRPL52 (ENSSARG00000005059) #21	MMP14 (ENSSARG00000005085) #22	LRP10 (ENSSARG00000005117) #23	REM2 (ENSSARG00000005146) #24	RBM23 (ENSSARG00000005165)
Atlantogenata	ANCESTRAL SPECIES	55	ENSGT00940000160183.d	ENSGT00940000160147.a	ENSGT00900000140957.B	ENSGT00940000164778	ENSGT00940000165951	ENSGT00550000075201	ENSGT00730000111639	ENSGT00940000160147.b	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260086.A.c.a.b	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Afrotheria	ANCESTRAL SPECIES	68		ENSGT00940000153130.a.b.a.b	ENSGT00940000153130.a.a.a.c.b	ENSGT00900000140957.A.b	ENSGT00940000160147.a	ENSGT00940000165951	ENSGT00730000111639	ENSGT00940000160147.b	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260086.A.c.a.b	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000161681 #36	ENSGT00940000158278 #37	ENSGT00740000115581.e
Tenrec	MODERN SPECIES	4809													OXA1L (ENSETEG00000002746) #19	SLC7A7 (ENSETEG00000002752) #20	MRPL52 (ENSETEG00000002757) #21	ENSETEG00000002759 #22
Afrotheria_a	ANCESTRAL SPECIES	66		ENSGT00940000153130.a.b.a.b	ENSGT00940000153130.a.a.a.c.b	ENSGT00900000140957.A.b	ENSGT00940000160147.a	ENSGT00940000165951	ENSGT00730000111639	ENSGT00940000160147.b	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260086.A.c.a.b	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841.jb #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000161681 #36	ENSGT00940000158278 #37	ENSGT00740000115581.e
Elephant	MODERN SPECIES	11	ENSLAFG00000026269	TRAV26-2 (ENSLAFG00000031190)	ENSLAFG00000031182	TRDV2 (ENSLAFG00000032114)	TRDV3 (ENSLAFG00000032133)	TRAC (ENSLAFG00000029692)	DAD1 (ENSLAFG00000000667) #16	ABHD4 (ENSLAFG00000000661) #17	OR6J1 (ENSLAFG00000026476)	ENSLAFG00000032265 #18	ENSLAFG00000029813 #18	ENSLAFG00000028204 #18	OXA1L (ENSLAFG00000026128) #19	SLC7A7 (ENSLAFG00000004114) #20	MRPL52 (ENSLAFG00000004118) #21	MMP14 (ENSLAFG00000002214) #22	LRP10 (ENSLAFG00000028518) #23	REM2 (ENSLAFG00000002216) #24	RBM23 (ENSLAFG00000018567)	PRMT5 (ENSLAFG00000004859) #25	HAUS4 (ENSLAFG00000012956) #26	AJUBA (ENSLAFG00000026749) #27	C14orf93 (ENSLAFG00000006110) #28	ENSLAFG00000015256 #29	PSMB11 (ENSLAFG00000003671) #30	CDH24 (ENSLAFG00000003672) #31	ACIN1 (ENSLAFG00000003679) #34	C14orf119 (ENSLAFG00000031047) #35	CEBPE (ENSLAFG00000031400) #36	SLC7A8 (ENSLAFG00000017607) #37	RNF212B (ENSLAFG00000022997)
Hyrax	MODERN SPECIES	4080													OXA1L (ENSPCAG00000000643) #19	SLC7A7 (ENSPCAG00000000696) #20	MRPL52 (ENSPCAG00000000730) #21	MMP14 (ENSPCAG00000000757) #22
Xenarthra	ANCESTRAL SPECIES	10	ENSGT00940000160183.d	ENSGT00940000160147.a	ENSGT00900000140957.B	ENSGT00940000164778	ENSGT00940000165951	ENSGT00550000075201	ENSGT01050000245453	ENSGT00940000164554 #15	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260086.A.c.a.b	ENSGT01090000260011.B #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708.a #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161681 #36	ENSGT00940000158278 #37
Armadillo	MODERN SPECIES	3264	ENSDNOG00000030719	TRDC (ENSDNOG00000046057)	ENSDNOG00000030724	TRAJ18 (ENSDNOG00000044553)	ENSDNOG00000032905 #15	DAD1 (ENSDNOG00000033306) #16	ABHD4 (ENSDNOG00000011575) #17	OR6J1 (ENSDNOG00000015928)	ENSDNOG00000046715 #18	ENSDNOG00000040673	ENSDNOG00000043711 #18	ENSDNOG00000036263 #18	OXA1L (ENSDNOG00000001130) #19	SLC7A7 (ENSDNOG00000001129) #20	MRPL52 (ENSDNOG00000032713) #21	MMP14 (ENSDNOG00000008414) #22	LRP10 (ENSDNOG00000045291) #23	REM2 (ENSDNOG00000024210) #24	RBM23 (ENSDNOG00000032457)	PRMT5 (ENSDNOG00000002572) #25	AJUBA (ENSDNOG00000045223) #27	C14orf93 (ENSDNOG00000048501) #28	PSMB5 (ENSDNOG00000045865) #29	PSMB11 (ENSDNOG00000048021) #30	CDH24 (ENSDNOG00000030883) #31	ACIN1 (ENSDNOG00000047667) #34	C14orf119 (ENSDNOG00000015765) #35	CIROP (ENSDNOG00000041362)	CEBPE (ENSDNOG00000007024) #36	SLC7A8 (ENSDNOG00000040397) #37	RNF212B (ENSDNOG00000011627)
Marsupialia	ANCESTRAL SPECIES		ENSGT00900000140957.D.a.b.a	ENSGT00900000140957.D.a.b.b.a.a	ENSGT00900000140957.D.a.b.b.b	ENSGT00940000164778	ENSGT00940000165951	ENSGT01030000235488	ENSGT00730000111639	ENSGT00940000160147.b	ENSGT00390000003324 #16	ENSGT00390000016277.b #17	ENSGT01090000260086.A.c.a.b.b	ENSGT01090000260011.B.bb.a.b.a #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000161681 #36	ENSGT00940000158278 #37	ENSGT00740000115581.e
Opossum	MODERN SPECIES		ENSMODG00000005661	ENSMODG00000029578	ENSMODG00000046846	ENSMODG00000005637	ENSMODG00000005630	DAD1 (ENSMODG00000005619) #16	ABHD4 (ENSMODG00000005609) #17	ENSMODG00000025734	ENSMODG00000005467 #18	ENSMODG00000005457 #18	ENSMODG00000005397 #18	ENSMODG00000005352	OXA1L (ENSMODG00000005347) #19	ENSMODG00000005329 #20	ENSMODG00000041569 #21	MMP14 (ENSMODG00000005279) #22	LRP10 (ENSMODG00000005233) #23	REM2 (ENSMODG00000005212) #24	RBM23 (ENSMODG00000024448)	PRMT5 (ENSMODG00000005204) #25	AJUBA (ENSMODG00000034930) #27	HAUS4 (ENSMODG00000005185) #26	C14orf93 (ENSMODG00000005171) #28	PSMB5 (ENSMODG00000005164) #29	PSMB11 (ENSMODG00000024444) #30	CDH24 (ENSMODG00000005152) #31	ACIN1 (ENSMODG00000005083) #34	C14orf119 (ENSMODG00000004611) #35	CEBPE (ENSMODG00000004586) #36	RNF212B (ENSMODG00000004558)	HOMEZ (ENSMODG00000024443)
Marsupialia_b	ANCESTRAL SPECIES		ENSGT00900000140957.B.a	ENSGT00900000140957.D.a.b.a.b	ENSGT00900000140957.D.a.b.b.a.a	ENSGT00900000140957.D.a.b.a.a.b	ENSGT00900000140957.D.a.b.b.b	ENSGT00900000140957.D.a.b.a.a.a	ENSGT01030000235488	ENSGT00940000160147.b	ENSGT00390000003324.b #16	ENSGT00390000016277.b #17	ENSGT01090000260086.A.c.a.b.b	ENSGT01090000260011.B.bb.a.b.a #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000161681 #36	ENSGT00940000158278 #37	ENSGT00740000115581.e
Diprotodontia	ANCESTRAL SPECIES		ENSGT00900000140957.B.a	ENSGT00900000140957.D.a.b.a.b	ENSGT00900000140957.D.a.b.b.a.a	ENSGT00900000140957.D.a.b.b.b	ENSGT00900000140957.D.a.b.a.a.b	ENSGT00900000140957.D.a.b.a.a.a	ENSGT01030000235488	ENSGT00940000160147.b	ENSGT00390000003324.b #16	ENSGT00390000016277.b #17	ENSGT01090000260086.A.c.a.b.b	ENSGT01090000260011.B.bb.a.b.a #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000161681 #36	ENSGT00940000158278 #37	ENSGT00740000115581.e
Diprotodontia_a	ANCESTRAL SPECIES	1	ENSGT00900000140957.D.a.b.b.b.a.a	ENSGT00900000140957.D.a.b.a.a.b.a	ENSGT00900000140957.D.a.b.b.b.b.a	ENSGT00900000140957.D.a.b.a.a.a	ENSGT00940000165951	ENSGT01020000230358.b	ENSGT01030000235488	ENSGT00940000160147.b	ENSGT00390000003324.b #16	ENSGT00390000016277.b #17	ENSGT01090000260086.A.c.a.b.b	ENSGT01090000260011.B.bb.a.b.a #18	ENSGT00530000063506.B #19	ENSGT00940000160134 #20	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00940000160978 #27	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000161681 #36	ENSGT00940000158278 #37	ENSGT00740000115581.e
Common wonbat	MODERN SPECIES	1107	ENSVURG00010020453	ENSVURG00010020457	ENSVURG00010020459	ENSVURG00010020463	ENSVURG00010020467	ENSVURG00010020474 #15	ENSVURG00010020479	ENSVURG00010020482 #16	ABHD4 (ENSVURG00010020492) #17	ENSVURG00010020494	ENSVURG00010020498	ENSVURG00010020503 #18	OXA1L (ENSVURG00010020513) #19	SLC7A7 (ENSVURG00010020520) #20	MRPL52 (ENSVURG00010020527) #21	MMP14 (ENSVURG00010020534) #22	LRP10 (ENSVURG00010020541) #23	REM2 (ENSVURG00010020549) #24	RBM23 (ENSVURG00010020558)	PRMT5 (ENSVURG00010020586) #25	HAUS4 (ENSVURG00010020603) #26	AJUBA (ENSVURG00010020619) #27	C14orf93 (ENSVURG00010020627) #28	PSMB5 (ENSVURG00010020631) #29	ENSVURG00010020632 #30	ENSVURG00010020635 #31	ENSVURG00010020639 #34	C14orf119 (ENSVURG00010020704) #35	CEBPE (ENSVURG00010020725) #36	SLC7A8 (ENSVURG00010020731) #37	RNF212B (ENSVURG00010020736)
koala	MODERN SPECIES		ENSPCIG00000027794	ENSPCIG00000027798	ENSPCIG00000027795	ENSPCIG00000035739	ENSPCIG00000035385	ENSPCIG00000027787	ENSPCIG00000027785	ENSPCIG00000027784	DAD1 (ENSPCIG00000027783) #16	ENSPCIG00000027781 #17	OR6J1 (ENSPCIG00000027780)	ENSPCIG00000034713 #18	OXA1L (ENSPCIG00000027779) #19	SLC7A7 (ENSPCIG00000027778) #20	MRPL52 (ENSPCIG00000027777) #21	MMP14 (ENSPCIG00000027776) #22	LRP10 (ENSPCIG00000027775) #23	REM2 (ENSPCIG00000027774) #24	RBM23 (ENSPCIG00000027773)	PRMT5 (ENSPCIG00000027772) #25	HAUS4 (ENSPCIG00000027771) #26	AJUBA (ENSPCIG00000027770) #27	C14orf93 (ENSPCIG00000027769) #28	PSMB5 (ENSPCIG00000033625) #29	ENSPCIG00000027766 #30	CDH24 (ENSPCIG00000027765) #31	ACIN1 (ENSPCIG00000027763) #34	C14orf119 (ENSPCIG00000027762) #35	CEBPE (ENSPCIG00000027761) #36	SLC7A8 (ENSPCIG00000027759) #37	RNF212B (ENSPCIG00000027757)
Wallaby	MODERN SPECIES	13089																MMP14 (ENSMEUG00000009447) #22
Tasmanian devil	MODERN SPECIES	1	ENSSHAG00000026835	ENSSHAG00000022618	ENSSHAG00000028106	DAD1 (ENSSHAG00000010354) #16	ABHD4 (ENSSHAG00000010507) #17	ENSSHAG00000010845	ENSSHAG00000030903 #18	ENSSHAG00000021988 #18	ENSSHAG00000030370 #18	ENSSHAG00000031813 #18	ENSSHAG00000011864	ENSSHAG00000020622	OXA1L (ENSSHAG00000012179) #19	SLC7A7 (ENSSHAG00000012222) #20	ENSSHAG00000029770 #21	MMP14 (ENSSHAG00000012576) #22	LRP10 (ENSSHAG00000012773) #23	REM2 (ENSSHAG00000012846) #24	RBM23 (ENSSHAG00000012932)	PRMT5 (ENSSHAG00000012999) #25	AJUBA (ENSSHAG00000013113) #27	HAUS4 (ENSSHAG00000031746) #26	C14orf93 (ENSSHAG00000013361) #28	PSMB5 (ENSSHAG00000013548) #29	PSMB11 (ENSSHAG00000024614) #30	CDH24 (ENSSHAG00000013627) #31	ACIN1 (ENSSHAG00000013673) #34	C14orf119 (ENSSHAG00000029308) #35	CEBPE (ENSSHAG00000013989) #36	SLC7A8 (ENSSHAG00000014184) #37	RNF212B (ENSSHAG00000014514)
Platypus	MODERN SPECIES	4	ENSOANG00000010752	ENSOANG00000010750	ENSOANG00000010730	ENSOANG00000009886	ENSOANG00000042446	ENSOANG00000036905	ENSOANG00000010729	ENSOANG00000036084	ENSOANG00000010727	TRDV3 (ENSOANG00000010728)	DAD1 (ENSOANG00000041339) #16	ABHD4 (ENSOANG00000010726) #17	OXA1L (ENSOANG00000010724) #19	SLC7A7 (ENSOANG00000010722) #20	ENSOANG00000046741	MMP14 (ENSOANG00000003915) #22	LRP10 (ENSOANG00000003912) #23	REM2 (ENSOANG00000003911) #24	RBM23 (ENSOANG00000038905)	PRMT5 (ENSOANG00000008909) #25	HAUS4 (ENSOANG00000010721) #26	ENSOANG00000010720 #27	C14orf93 (ENSOANG00000010719) #28	PSMB5 (ENSOANG00000004542) #29	PSMB11 (ENSOANG00000004543) #30	CDH24 (ENSOANG00000041564) #31	ENSOANG00000047420 #34	ENSOANG00000009436 #34	C14orf119 (ENSOANG00000009437) #35	CEBPE (ENSOANG00000007645) #36	SLC7A8 (ENSOANG00000007644) #37
Sauria	ANCESTRAL SPECIES	36	ENSGT00950000183098.b.a.a	ENSGT00530000063693.a	ENSGT00720000108873	ENSGT00390000001912.e	ENSGT00940000161567	ENSGT00940000157990	ENSGT00940000162272	ENSGT00950000182838.B.a.b	ENSGT00390000005996	ENSGT00940000160537	ENSGT00500000044922	ENSGT00390000001141 #25	ENSGT00940000162546	ENSGT00940000160062 #24	ENSGT00940000160783 #23	ENSGT00940000157808 #22	ENSGT00390000005763 #21	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00940000163076	ENSGT00940000162793.a	ENSGT01090000260011.B #18	ENSGT00390000016277.b #17	ENSGT00390000003324 #16	ENSGT00960000186967	ENSGT00940000163058	ENSGT00940000163275	ENSGT00940000162245	ENSGT00550000075058	ENSGT00940000154888	ENSGT00940000153886.a.a
Lepidosauria	ANCESTRAL SPECIES	55	ENSGT00950000182893.a.b	ENSGT00740000115581.e	ENSGT00940000158278 #37	ENSGT00940000161681 #36	ENSGT00390000007438 #35	ENSGT00710000106790 #34	ENSGT00940000159567 #31	ENSGT00940000162200 #30	ENSGT00940000157841 #29	ENSGT00390000012708 #28	ENSGT00390000014634 #26	ENSGT00390000001141 #25	ENSGT00940000162546	ENSGT00940000160062 #24	ENSGT00940000160783 #23	ENSGT00940000157808 #22	ENSGT00390000005763 #21	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00940000163076	ENSGT00940000161491.d.w.a	ENSGT01030000234878	ENSGT00940000162793.b	ENSGT00940000161491.d.w.b	ENSGT00940000163371.b.b
Episquamata	ANCESTRAL SPECIES	20	ENSGT00740000115581.e	ENSGT00940000158278 #37	ENSGT00940000161681 #36	ENSGT00390000007438 #35	ENSGT00710000106790.s #34	ENSGT00710000106790.t #34	ENSGT00940000159567 #31	ENSGT00940000162200 #30	ENSGT00940000157841 #29	ENSGT00390000012708 #28	ENSGT00390000014634 #26	ENSGT00390000001141 #25	ENSGT00940000162546	ENSGT00940000160062 #24	ENSGT00940000160783 #23	ENSGT00940000157808 #22	ENSGT00390000005763 #21	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00960000190008	ENSGT00940000163371.b.b	ENSGT01000000219505	ENSGT00940000162793.b	ENSGT00940000161491.d.w.b	ENSGT01030000234536.b.a.a.a	ENSGT01030000234536.a.d.b.b.b.a.a	ENSGT01050000244936.d.s.b.b.b	ENSGT01050000244936.d.s.b.b.a.a.b
Toxicofera	ANCESTRAL SPECIES	30	ENSGT00950000182893.a.b	ENSGT00940000158278 #37	ENSGT00940000161681 #36	ENSGT00390000007438 #35	ENSGT00710000106790.s #34	ENSGT00710000106790.t #34	ENSGT00940000159567 #31	ENSGT00940000162200 #30	ENSGT00940000157841 #29	ENSGT00390000012708 #28	ENSGT00390000014634 #26	ENSGT00390000001141 #25	ENSGT00940000162546	ENSGT00940000160062 #24	ENSGT00940000160783 #23	ENSGT00940000157808 #22	ENSGT00390000005763 #21	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00960000190008	ENSGT00940000163371.b.b	ENSGT01000000219505	ENSGT00940000161491.d.w.b	ENSGT00940000153832.e.b	ENSGT00940000161810.a.a
Elapidae	DUPLICATION
Elapidae	ANCESTRAL SPECIES	30	ENSGT00940000158278 #37	ENSGT00940000161681 #36	ENSGT00390000007438 #35	ENSGT00710000106790.s #34	ENSGT00960000191070	ENSGT00710000106790.t.a #34	ENSGT00940000159567 #31	ENSGT00940000162200 #30	ENSGT00940000157841 #29	ENSGT00390000012708 #28	ENSGT00390000014634 #26	ENSGT00390000001141 #25	ENSGT00940000162546.e	ENSGT00940000160062.c #24	ENSGT00940000160783 #23	ENSGT00940000157808.c #22	ENSGT00390000005763 #21	ENSGT00940000160134 #20	ENSGT00530000063506.B.v #19	ENSGT00950000182812.H	ENSGT00530000063506.B.u #19	ENSGT00960000190008	ENSGT00940000163371.b.b	ENSGT01000000219505	ENSGT00940000161491.d.w.b	ENSGT00940000161810.a.a	ENSGT00940000163103	ENSGT00940000153683.a.b	ENSGT00940000162852.b.a.a.b.a.e	ENSGT00940000162852.b.a.a.b.a.f	ENSGT00940000162852.b.a.a.b.b.a
Elapidae_a	ANCESTRAL SPECIES	75	ENSGT00940000158278 #37	ENSGT00940000161681 #36	ENSGT00390000007438 #35	ENSGT00710000106790.s #34	ENSGT00960000191070	ENSGT00710000106790.t.a #34	ENSGT00940000159567.c #31	ENSGT00940000162200 #30	ENSGT00940000157841 #29	ENSGT00390000012708 #28	ENSGT00390000014634 #26	ENSGT00390000001141 #25	ENSGT00940000162546.e	ENSGT00940000160062.c #24	ENSGT00940000160783 #23	ENSGT00940000157808.c #22	ENSGT00390000005763 #21	ENSGT00940000160134 #20	ENSGT00530000063506.B.v #19	ENSGT00950000182812.H	ENSGT00530000063506.B.u #19	ENSGT00960000190008	ENSGT00940000163371.b.b	ENSGT01000000219505	ENSGT00940000161491.d.w.b
Acanthophiinae	ANCESTRAL SPECIES	73	ENSGT00940000158278 #37	ENSGT00940000161681 #36	ENSGT00390000007438 #35	ENSGT00710000106790.s #34	ENSGT00960000191070	ENSGT00710000106790.t.a #34	ENSGT00940000159567.c #31	ENSGT00940000162200 #30	ENSGT00940000157841 #29	ENSGT00390000012708 #28	ENSGT00390000014634 #26	ENSGT00390000001141 #25	ENSGT00940000162546.e	ENSGT00940000160062.c #24	ENSGT00940000160783 #23	ENSGT00940000157808.c #22	ENSGT00390000005763 #21	ENSGT00940000160134 #20	ENSGT00530000063506.B.v #19	ENSGT00530000063506.B.u #19	ENSGT00940000162793.b.b	ENSGT00960000190008	ENSGT00940000163371.b.b	ENSGT01000000219505	ENSGT00940000161491.d.w.b
Eastern brown snake	MODERN SPECIES	124	PPP1R3E (ENSPTXG00000009970)	ENSPTXG00000009971	HOMEZ (ENSPTXG00000009972)	SLC7A8 (ENSPTXG00000009973) #37	CEBPE (ENSPTXG00000009974) #36	C14orf119 (ENSPTXG00000009975) #35	CDH24 (ENSPTXG00000009976) #31	PSMB11 (ENSPTXG00000009977) #30	PSMB5 (ENSPTXG00000009978) #29	C14orf93 (ENSPTXG00000009979) #28	HAUS4 (ENSPTXG00000009980) #26	PRMT5 (ENSPTXG00000009985) #25	ENSPTXG00000009989	REM2 (ENSPTXG00000009992) #24	LRP10 (ENSPTXG00000009994) #23	ENSPTXG00000009997 #22	MRPL52 (ENSPTXG00000009999) #21	ENSPTXG00000010001 #20	ENSPTXG00000010008 #20	ENSPTXG00000010010 #19	ENSPTXG00000010012	ENSPTXG00000010015	ENSPTXG00000010016	ENSPTXG00000010017	ENSPTXG00000010018	ENSPTXG00000010019	ENSPTXG00000010020	ENSPTXG00000010021	ENSPTXG00000010022	ENSPTXG00000010023
Mainland tiger snake	MODERN SPECIES	190	PPP1R3E (ENSNSUG00000014861)	ENSNSUG00000014860	HOMEZ (ENSNSUG00000014859)	SLC7A8 (ENSNSUG00000014858) #37	ENSNSUG00000014857	ENSNSUG00000014856 #34	CDH24 (ENSNSUG00000014849) #31	PSMB11 (ENSNSUG00000014848) #30	PSMB5 (ENSNSUG00000014847) #29	C14orf93 (ENSNSUG00000014846) #28	ENSNSUG00000014845 #26	PRMT5 (ENSNSUG00000014844) #25	ENSNSUG00000014843	REM2 (ENSNSUG00000014840) #24	ENSNSUG00000014837	ENSNSUG00000014834 #22	MRPL52 (ENSNSUG00000014833) #21	SLC7A7 (ENSNSUG00000014832) #20	ENSNSUG00000014831 #19	ENSNSUG00000014830 #19
Blue-lipped sea krait	MODERN SPECIES	8380															ENSLLTG00000004677	MMP14 (ENSLLTG00000004649) #22	ENSLLTG00000004632 #21	SLC7A7 (ENSLLTG00000004608) #20
Indian cobra	MODERN SPECIES	337	PPP1R3E (ENSNNAG00000005883)	ENSNNAG00000005862	HOMEZ (ENSNNAG00000005837)	SLC7A8 (ENSNNAG00000005798) #37	ENSNNAG00000005779	ENSNNAG00000005688 #34	CDH24 (ENSNNAG00000005217) #31	PSMB11 (ENSNNAG00000005160) #30	PSMB5 (ENSNNAG00000005153) #29	C14orf93 (ENSNNAG00000005047) #28	ENSNNAG00000005017 #26	PRMT5 (ENSNNAG00000004564) #25	ENSNNAG00000004410	REM2 (ENSNNAG00000004386) #24	ENSNNAG00000004373	MMP14 (ENSNNAG00000004351) #22	MRPL52 (ENSNNAG00000004331) #21	SLC7A7 (ENSNNAG00000004285) #20	ENSNNAG00000004257 #19	ENSNNAG00000004245	ENSNNAG00000004208 #19	ENSNNAG00000004175	ENSNNAG00000004157	ENSNNAG00000004092	ENSNNAG00000004062	ENSNNAG00000004044	ENSNNAG00000003625	IGHM (ENSNNAG00000003525)	ENSNNAG00000003497	ENSNNAG00000003474	ENSNNAG00000003462
Elapidae	ANCESTRAL SPECIES																	ENSGT00940000157808.d #22
Elapidae_a	ANCESTRAL SPECIES																	ENSGT00940000157808.d #22
Acanthophiinae	ANCESTRAL SPECIES																	ENSGT00940000157808.d #22
Mainland tiger snake	MODERN SPECIES	586																ENSNSUG00000001425 #22
Eastern brown snake	MODERN SPECIES	309																ENSPTXG00000012391 #22
Lizard	MODERN SPECIES	1103																ENSACAG00000001287 #22	MRPL52 (ENSACAG00000001265) #21	ENSACAG00000001035 #20	OXA1L (ENSACAG00000000945) #19	ENSACAG00000024548	ENSACAG00000023622	ENSACAG00000038567	ENSACAG00000034916	ENSACAG00000022340	ENSACAG00000023684	ENSACAG00000045018	ENSACAG00000029323	ENSACAG00000021047	ENSACAG00000040615	ENSACAG00000035540	ENSACAG00000036908
Laterata	ANCESTRAL SPECIES	26	ENSGT00740000115581.e	ENSGT00940000158278 #37	ENSGT00940000161681 #36	ENSGT00390000007438 #35	ENSGT00710000106790.s #34	ENSGT00710000106790.t #34	ENSGT00940000159567 #31	ENSGT00940000162200 #30	ENSGT00940000157841 #29	ENSGT00390000012708 #28	ENSGT00390000014634 #26	ENSGT00390000001141 #25	ENSGT00940000162546	ENSGT00940000160062 #24	ENSGT00940000160783 #23	ENSGT00940000157808 #22	ENSGT00390000005763 #21	ENSGT00940000160134 #20	ENSGT00530000063506.B.s.a #19	ENSGT00940000163371.b.b	ENSGT01000000219505	ENSGT00940000161491.d.w.b.a	ENSGT01030000234536.a.c	ENSGT01030000234536.b.a.b.b.b.a	ENSGT01050000244936.d.s.b.a
Common wall lizard	MODERN SPECIES	4	ENSPMRG00000020467	HOMEZ (ENSPMRG00000020463)	RNF212B (ENSPMRG00000020454)	SLC7A8 (ENSPMRG00000020448) #37	CEBPE (ENSPMRG00000020441) #36	C14orf119 (ENSPMRG00000020439) #35	ACIN1 (ENSPMRG00000021068) #34	CDH24 (ENSPMRG00000021049) #31	PSMB11 (ENSPMRG00000021034) #30	PSMB5 (ENSPMRG00000021025) #29	C14orf93 (ENSPMRG00000021018) #28	HAUS4 (ENSPMRG00000021006) #26	PRMT5 (ENSPMRG00000020981) #25	REM2 (ENSPMRG00000020969) #24	LRP10 (ENSPMRG00000020961) #23	MMP14 (ENSPMRG00000020952) #22	MRPL52 (ENSPMRG00000020948) #21	SLC7A7 (ENSPMRG00000020939) #20	OXA1L (ENSPMRG00000020928) #19	ENSPMRG00000020896	ENSPMRG00000020889	ENSPMRG00000020885	ENSPMRG00000020882	ENSPMRG00000020878	ENSPMRG00000020872	ENSPMRG00000020869	ENSPMRG00000020847	ENSPMRG00000020854	ENSPMRG00000020844	ENSPMRG00000020839	ENSPMRG00000020834
Argentine black and white tegu	MODERN SPECIES	38	PPP1R3E (ENSSMRG00000004451)	ENSSMRG00000004462	HOMEZ (ENSSMRG00000004464)	SLC7A8 (ENSSMRG00000004465) #37	CEBPE (ENSSMRG00000004479) #36	C14orf119 (ENSSMRG00000004489) #35	ACIN1 (ENSSMRG00000004490) #34	CDH24 (ENSSMRG00000004516) #31	PSMB11 (ENSSMRG00000004521) #30	PSMB5 (ENSSMRG00000004524) #29	HAUS4 (ENSSMRG00000004526) #26	PRMT5 (ENSSMRG00000004534) #25	RBM23 (ENSSMRG00000004536)	REM2 (ENSSMRG00000004544) #24	LRP10 (ENSSMRG00000004554) #23	MMP14 (ENSSMRG00000004558) #22	MRPL52 (ENSSMRG00000004591) #21	SLC7A7 (ENSSMRG00000004602) #20	ENSSMRG00000004610 #19	ENSSMRG00000004618 #19	ENSSMRG00000004621 #19	ENSSMRG00000004623	ENSSMRG00000004624	ENSSMRG00000004626	ENSSMRG00000004630	ENSSMRG00000004631	ENSSMRG00000004641	ENSSMRG00000004667	ENSSMRG00000004673	ENSSMRG00000004677	ENSSMRG00000004681
tuatara	MODERN SPECIES	1221	PPP1R3E (ENSSPUG00000018315)	HOMEZ (ENSSPUG00000000035)	SLC7A8 (ENSSPUG00000000049) #37	CEBPE (ENSSPUG00000000097) #36	ENSSPUG00000000098 #34	ENSSPUG00000000171 #34	ENSSPUG00000000318 #28	PSMB5 (ENSSPUG00000000355) #29	PSMB11 (ENSSPUG00000000359) #30	ENSSPUG00000000368 #28	HAUS4 (ENSSPUG00000000409) #26	PRMT5 (ENSSPUG00000000421) #25	RBM23 (ENSSPUG00000000489)	REM2 (ENSSPUG00000000505) #24	LRP10 (ENSSPUG00000000532) #23	MMP14 (ENSSPUG00000000573) #22	MRPL52 (ENSSPUG00000000605) #21	ENSSPUG00000000611 #20	ENSSPUG00000000614 #20	OXA1L (ENSSPUG00000000616) #19	ENSSPUG00000000627	ENSSPUG00000000636	ENSSPUG00000000640	ENSSPUG00000000645	ENSSPUG00000000650	ENSSPUG00000000656	IGHM (ENSSPUG00000000665)	ENSSPUG00000000678	ENSSPUG00000000683	ENSSPUG00000000687	ENSSPUG00000000693
Archelosauria	ANCESTRAL SPECIES	35	ENSGT00940000161906	ENSGT00950000182893.a.b	ENSGT00740000115581.e	ENSGT00940000158278 #37	ENSGT00940000161681 #36	ENSGT00390000007438 #35	ENSGT00710000106790 #34	ENSGT00940000159567 #31	ENSGT00940000162200 #30	ENSGT00940000157841 #29	ENSGT00390000012708 #28	ENSGT00390000014634 #26	ENSGT00390000001141 #25	ENSGT00940000162546	ENSGT00940000160062 #24	ENSGT00940000157808 #22	ENSGT00390000005763 #21	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00940000162793.b	ENSGT00940000163076	ENSGT00940000162793.a	ENSGT00940000161491.d.w.b	ENSGT01030000234536.a.d.b.b.a.b.a	ENSGT01050000244936.c.a.a.a.a.b	ENSGT00940000163847.e.a.b	ENSGT01050000244936.c.a.a.a.b.a	ENSGT01090000259993.D	ENSGT01030000234536.a.d.b.b.a.a.a	ENSGT01090000259993.B	ENSGT01050000244936.d
Archosauria	ANCESTRAL SPECIES	248																ENSGT00940000157808 #22	ENSGT01100000264245
Aves	ANCESTRAL SPECIES	239																ENSGT00940000157808 #22	ENSGT01100000264245
Neognathae	ANCESTRAL SPECIES	201																ENSGT00940000157808 #22	ENSGT01100000264245
Galloanserae	ANCESTRAL SPECIES	192																ENSGT00940000157808 #22	ENSGT01100000264245
Phasianidae	ANCESTRAL SPECIES	156																ENSGT00940000157808 #22	ENSGT01100000264245
Japanese quail	MODERN SPECIES	174																ENSCJPG00005001914 #22	ENSCJPG00005001923
Phasianidae_b	ANCESTRAL SPECIES	143																ENSGT00940000157808 #22	ENSGT01100000264245
Chicken	MODERN SPECIES	28									ENSGALG00010004057	ENSGALG00010004046	NEDD8 (ENSGALG00010004034)	ENSGALG00010004000	ENSGALG00010003993 #19	PRMT5 (ENSGALG00010003985) #25	ENSGALG00010004063	ENSGALG00010003937 #22	ENSGALG00010003928	PSMB5 (ENSGALG00010003913) #29	ENSGALG00010003902	ENSGALG00010003882 #34	ENSGALG00010003871	PCK2 (ENSGALG00010003862)	ENSGALG00010003835	PSME1 (ENSGALG00010003804)	ENSGALG00010003794	ENSGALG00010003785	ENSGALG00010003782	ENSGALG00010003777	ENSGALG00010003683	ENSGALG00010003757	ENSGALG00010003745
Neognathae_b	ANCESTRAL SPECIES																	ENSGT00940000157808 #22
Passeriformes	ANCESTRAL SPECIES																	ENSGT00940000157808 #22
Passeriformes_d	ANCESTRAL SPECIES																	ENSGT00940000157808 #22
Passeriformes_g	ANCESTRAL SPECIES																	ENSGT00940000157808 #22
Passeroidea	ANCESTRAL SPECIES																	ENSGT00940000157808 #22
Zebra finch	DUPLICATION
Zebra finch	DUPLICATION
Zebra finch	MODERN SPECIES	86	ENSTGUG00000021473	ENSTGUG00000020706	ENSTGUG00000024582	ENSTGUG00000027240	ENSTGUG00000023490 #34	ENSTGUG00000024309 #37	ENSTGUG00000026793	ENSTGUG00000026620	ENSTGUG00000029343	ENSTGUG00000021471	ENSTGUG00000021104 #29	ENSTGUG00000021783	ENSTGUG00000023653	ENSTGUG00000029759	ENSTGUG00000019974 #25	ENSTGUG00000027681 #22	ENSTGUG00000029640 #19	ENSTGUG00000020942	ENSTGUG00000026075	NEDD8 (ENSTGUG00000026591)	ENSTGUG00000029027	TGM1 (ENSTGUG00000020165)	RABGGTA (ENSTGUG00000020721)
Zebra finch	MODERN SPECIES	86	ENSTGUG00000020407	ENSTGUG00000028531	ENSTGUG00000020499	ENSTGUG00000021958	ENSTGUG00000027319	ENSTGUG00000019685	ENSTGUG00000022679	ENSTGUG00000028100 #37	ENSTGUG00000020358	ENSTGUG00000027088 #29	ENSTGUG00000026170	ENSTGUG00000025242	ENSTGUG00000023176	ENSTGUG00000021453 #25	ENSTGUG00000027611 #22	ENSTGUG00000023003 #22	ENSTGUG00000029381 #19	ENSTGUG00000024154
Zebra finch	MODERN SPECIES	86	ENSTGUG00000023110	ENSTGUG00000020407	ENSTGUG00000028531	ENSTGUG00000020499	ENSTGUG00000021958	ENSTGUG00000027319	ENSTGUG00000019685	ENSTGUG00000022679	ENSTGUG00000028100 #37	ENSTGUG00000020358	ENSTGUG00000027088 #29	ENSTGUG00000026170	ENSTGUG00000025242	ENSTGUG00000023176	ENSTGUG00000021453 #25	ENSTGUG00000027611 #22	ENSTGUG00000023003 #22	ENSTGUG00000029381 #19	ENSTGUG00000024154
Cryptodira	ANCESTRAL SPECIES	90																ENSGT00940000157808 #22	ENSGT00390000005763 #21	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT01030000234878	ENSGT00940000161491.d.w.a.c	ENSGT00940000162793.b	ENSGT00940000163076	ENSGT00940000162793.a	ENSGT00940000161491.d.w.b	ENSGT01030000234536.a.d.b.b.a.b.a.b	ENSGT01090000259993.D	ENSGT01030000234536.a.d.b.b.a.a.a	ENSGT01090000259993.B	ENSGT01050000244936.c.a.a.a.b.a.b.b
Testudinoidea	ANCESTRAL SPECIES	108																ENSGT00940000157808 #22	ENSGT00390000005763 #21	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00940000163076.g.b.b.a
Testudinidae	ANCESTRAL SPECIES	115												ENSGT00390000012708 #28	ENSGT00390000014634 #26	ENSGT00390000001141 #25	ENSGT00940000160062.f #24	ENSGT00940000157808 #22	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00940000163076.g.b.b.b	ENSGT00940000162793.a.a.b
Goode s thornscrub tortoise	MODERN SPECIES	58															PRMT5 (ENSGEVG00005018780) #25	MMP14 (ENSGEVG00005018813) #22	ENSGEVG00005018833 #20	OXA1L (ENSGEVG00005018867) #19
Abingdon island giant tortoise	MODERN SPECIES	2700												C14orf93 (ENSCABG00000012335) #28	HAUS4 (ENSCABG00000012336) #26	ENSCABG00000012338 #25	ENSCABG00000012341 #24	MMP14 (ENSCABG00000012344) #22	SLC7A7 (ENSCABG00000012345) #20	OXA1L (ENSCABG00000012346) #19	ENSCABG00000012347	ENSCABG00000012348
Emydidae	ANCESTRAL SPECIES	144																ENSGT00940000157808 #22	ENSGT00390000005763 #21	ENSGT00940000160134 #20	ENSGT00960000188982	ENSGT00940000162793.b.h	ENSGT00940000163076.g.b.b.b	ENSGT00940000161491.d.w.a.c.c	ENSGT00940000163076.g.a
painted turtle	MODERN SPECIES	909	PPP1R3E (ENSCPBG00000026062)	HOMEZ (ENSCPBG00000026064)	ENSCPBG00000026066	SLC7A8 (ENSCPBG00000026070) #37	CEBPE (ENSCPBG00000026072) #36	C14orf119 (ENSCPBG00000026074) #35	ACIN1 (ENSCPBG00000026078) #34	CDH24 (ENSCPBG00000026082) #31	PSMB11 (ENSCPBG00000026084) #30	PSMB5 (ENSCPBG00000026086) #29	C14orf93 (ENSCPBG00000026087) #28	HAUS4 (ENSCPBG00000026090) #26	PRMT5 (ENSCPBG00000026091) #25	RBM23 (ENSCPBG00000026096)	REM2 (ENSCPBG00000026102) #24	MMP14 (ENSCPBG00000026105) #22	MRPL52 (ENSCPBG00000026107) #21	SLC7A7 (ENSCPBG00000026108) #20	ENSCPBG00000026110	ENSCPBG00000026112	ENSCPBG00000026114	ENSCPBG00000026120	ENSCPBG00000026125	ENSCPBG00000026127	ENSCPBG00000026132	ENSCPBG00000026136	ENSCPBG00000026139	ENSCPBG00000026141	ENSCPBG00000026143	ENSCPBG00000026146	ENSCPBG00000026149
Anura	ANCESTRAL SPECIES	42	ENSGT00940000158278 #37	ENSGT00740000115581.e	ENSGT00950000182893.a.b	ENSGT01090000260003.a.b.b.a.a.b.b.b	ENSGT00940000154606	ENSGT00950000183008.a.a.b	ENSGT00940000161867	ENSGT00940000154805.b.g	ENSGT00500000044922	ENSGT00390000005996	ENSGT00940000160537	ENSGT00950000182838.B.a.b	ENSGT00940000162272	ENSGT00940000157990	ENSGT00390000005763 #21	ENSGT00940000157808 #22	ENSGT00940000160783 #23	ENSGT00940000160062 #24	ENSGT00940000162546	ENSGT00390000001141 #25	ENSGT00390000014634 #26	ENSGT00390000012708 #28	ENSGT00940000157841 #29	ENSGT00940000162200 #30	ENSGT00940000159567 #31	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00940000163573	ENSGT00940000161068	ENSGT00940000162747	ENSGT00940000160134 #20
Frog	MODERN SPECIES		ppp1r3e (ENSXETG00000036651)	bcl2l2 (ENSXETG00000014599)	pabpn1 (ENSXETG00000014597)	efs (ENSXETG00000027223)	cmtm5 (ENSXETG00000032367)	myh6 (ENSXETG00000048130)	ngdn (ENSXETG00000014562)	thtpa (ENSXETG00000014559)	zfhx2 (ENSXETG00000038803)	ap1g2 (ENSXETG00000022564)	ENSXETG00000035764	carmil3 (ENSXETG00000022577)	ENSXETG00000046219	ENSXETG00000047505	mrpl52 (ENSXETG00000033124) #21	mmp14 (ENSXETG00000022669) #22	rem2 (ENSXETG00000013757) #24	ENSXETG00000041564	rbm23 (ENSXETG00000022623)	prmt5 (ENSXETG00000022626) #25	haus4 (ENSXETG00000022630) #26	C14orf93 (ENSXETG00000022632) #28	ENSXETG00000042909	psmb5 (ENSXETG00000026351) #29	psmb11 (ENSXETG00000022638) #30	cdh24 (ENSXETG00000022648) #31	acin1 (ENSXETG00000025376) #34	c14orf119 (ENSXETG00000044771) #35	CIROP (ENSXETG00000047679)	nrl (ENSXETG00000022130)	slc7a7 (ENSXETG00000022128) #20
Leishan spiny toad	MODERN SPECIES		ENSLLEG00000014956	ENSLLEG00000014833	EFS (ENSLLEG00000014732)	ENSLLEG00000014571	NGDN (ENSLLEG00000014418)	MYH6 (ENSLLEG00000013354)	THTPA (ENSLLEG00000014356)	ENSLLEG00000013163	ENSLLEG00000012652	JPH4 (ENSLLEG00000012563)	ENSLLEG00000012479	ENSLLEG00000012458	ENSLLEG00000010712	ENSLLEG00000010602	MRPL52 (ENSLLEG00000010559) #21	MMP14 (ENSLLEG00000010435) #22	ENSLLEG00000010402	LRP10 (ENSLLEG00000010294) #23	REM2 (ENSLLEG00000010247) #24	ENSLLEG00000010227	RBM23 (ENSLLEG00000010142)	PRMT5 (ENSLLEG00000008797) #25	HAUS4 (ENSLLEG00000008633) #26	C14orf93 (ENSLLEG00000008588) #28	ENSLLEG00000008565	ENSLLEG00000008534 #29	PSMB11 (ENSLLEG00000008480) #30	CDH24 (ENSLLEG00000008291) #31	ACIN1 (ENSLLEG00000008135) #34	C14orf119 (ENSLLEG00000008099) #35	ENSLLEG00000008084
Coelacanth	MODERN SPECIES	430														ENSLACG00000017126	ENSLACG00000017090	MMP14 (ENSLACG00000016983) #22	LRP10 (ENSLACG00000016831) #23	REM2 (ENSLACG00000016785) #24	ENSLACG00000016576	ENSLACG00000016318	ENSLACG00000016005	ENSLACG00000015821	C14orf119 (ENSLACG00000015778) #35	ACIN1 (ENSLACG00000015560) #34	ENSLACG00000015456	C14orf93 (ENSLACG00000015300) #28	psmb5 (ENSLACG00000015194) #29	ENSLACG00000015163 #30	ENSLACG00000015147 #30	CDH24 (ENSLACG00000014676) #31	AP1G2 (ENSLACG00000013220)
Actinopterygii	ANCESTRAL SPECIES	294															ENSGT00940000160783 #23	ENSGT00940000157808 #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00910000147451	ENSGT00550000075058	ENSGT00390000006227	ENSGT00390000002849	ENSGT00940000155384.b	ENSGT00940000160134 #20	ENSGT00530000063506.B #19
Neopterygii	ANCESTRAL SPECIES	357															ENSGT00940000160783 #23	ENSGT00940000157808 #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790 #34	ENSGT00390000007438 #35	ENSGT00390000016277.b #17	ENSGT00390000003324 #16
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00940000157808.g #22
Clupeocephala	ANCESTRAL SPECIES	85	ENSGT00940000166346	ENSGT00940000169565	ENSGT01030000234599.a.b.d.b.a.a	ENSGT01030000234599.a.b.d.a.b.b	ENSGT00940000156907.p.b.a	ENSGT00950000182900.D	ENSGT01080000257720	ENSGT00390000019377.a.a.a	ENSGT00950000182774.b.b.b	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000162556.E.a	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT01030000235234	ENSGT00390000007438 #35	ENSGT01040000240385.C	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29
Otomorpha	ANCESTRAL SPECIES	38	ENSGT01050000244890.a.a.b	ENSGT00940000166346	ENSGT00940000169565	ENSGT01030000234599.a.b.d.b.a.a	ENSGT01030000234599.a.b.d.a.b.b	ENSGT01080000257720	ENSGT00950000182900.D	ENSGT00950000183116.b.b	ENSGT00390000019377.a.a.a	ENSGT00950000182774.b.b.b.a.b	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT01030000235234	ENSGT00710000106790.x #34	ENSGT00390000007438 #35	ENSGT01040000240385.C	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c.g	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29
Clupeiformes	ANCESTRAL SPECIES	184				ENSGT01030000234599.a.b.d.b.a.a	ENSGT01030000234599.a.b.d.a.b.b	ENSGT00950000182900.D	ENSGT00940000156907.p.b.a.e	ENSGT00950000183116.b.b	ENSGT00390000019377.a.a.a	ENSGT00950000182774.b.b.b.a.b	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x.a #34	ENSGT01030000235234	ENSGT00710000106790.x.b #34	ENSGT00390000007438 #35	ENSGT01040000240385.C	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c.g	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30
Atlantic herring	MODERN SPECIES	14	NFATC4 (ENSCHAG00000023644)	apol1 (ENSCHAG00000023655)	ENSCHAG00000023713	ENSCHAG00000023717	ENSCHAG00000023720	DCAF8 (ENSCHAG00000023736)	ENSCHAG00000023957	casq1a (ENSCHAG00000023997)	ENSCHAG00000024144	ENSCHAG00000024150	ENSCHAG00000024154	chd8 (ENSCHAG00000024247)	cbln12 (ENSCHAG00000025953)	ENSCHAG00000025964	ENSCHAG00000002592	mmp14b (ENSCHAG00000002635) #22	ENSCHAG00000003021 #34	ENSCHAG00000003223	si:ch211-14a17.11 (ENSCHAG00000003254) #35	ENSCHAG00000003317	ENSCHAG00000003834	dhrs1 (ENSCHAG00000003850)	homeza (ENSCHAG00000004088)	zp3f.1 (ENSCHAG00000004104)	zp3f.2 (ENSCHAG00000004170)	zp3f.1 (ENSCHAG00000004402)	zp3f.2 (ENSCHAG00000004603)	nedd8l (ENSCHAG00000004765)	ap1g2 (ENSCHAG00000004882)	ENSCHAG00000005549 #37	prmt5 (ENSCHAG00000006322) #25
Denticle herring	MODERN SPECIES	14	fam110b (ENSDCDG00000000369)	bpnt2 (ENSDCDG00000000378)	penka (ENSDCDG00000000396)	sdr16c5a (ENSDCDG00000000404)	sdr16c5a (ENSDCDG00000000411)	ENSDCDG00000000679	tox (ENSDCDG00000001537)	cyp7a1 (ENSDCDG00000001541)	fam110b (ENSDCDG00000001543)	penka (ENSDCDG00000001545)	lhx8a (ENSDCDG00000001547)	tyw3 (ENSDCDG00000001555)	cryz (ENSDCDG00000001563)	ENSDCDG00000001605	ENSDCDG00000001608	mmp14b (ENSDCDG00000001648) #22	ENSDCDG00000001777 #34	ENSDCDG00000001781	ENSDCDG00000001782 #34	si:ch211-14a17.11 (ENSDCDG00000001784) #35	ENSDCDG00000001786	dhrs1 (ENSDCDG00000001791)	dhrs1 (ENSDCDG00000001793)	homeza (ENSDCDG00000001801)	ENSDCDG00000001807	ENSDCDG00000001810	zp3f.1 (ENSDCDG00000001813)	zp3f.2 (ENSDCDG00000001818)	nedd8l (ENSDCDG00000001855)	ap1g2 (ENSDCDG00000001873)	prmt5 (ENSDCDG00000001892) #25
Otophysi	ANCESTRAL SPECIES	3	ENSGT00940000154368.s	ENSGT00950000183116.b.a.a.a.a	ENSGT01030000234599.a.b.d.b.a.a	ENSGT01030000234599.a.b.d.a.b.b	ENSGT01080000257720	ENSGT00950000182900.D	ENSGT00940000156907.p.b.b	ENSGT00950000183116.b.b	ENSGT00390000019377.a.a.a	ENSGT00940000172304.b	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT01030000235234	ENSGT00710000106790.x #34	ENSGT00390000007438 #35	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c.g	ENSGT01030000234567.A.b.d	ENSGT00940000165806	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29
Characiphysae	ANCESTRAL SPECIES	35										ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT01030000235234	ENSGT00710000106790.x #34	ENSGT00390000007438 #35	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c.g	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31
Characiphysae_b	ANCESTRAL SPECIES	33										ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT01030000235234	ENSGT00710000106790.x #34	ENSGT00390000007438 #35	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c.g	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000163520.A.a.a.a.b.a
Characoidei	ANCESTRAL SPECIES	20				ENSGT00940000158333	ENSGT00950000183179.a	ENSGT00940000160470	ENSGT00940000166185	ENSGT00940000161173	ENSGT00940000155924.b	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT01030000235234	ENSGT00710000106790.x #34	ENSGT00390000007438 #35	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c.g	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000163520.A.a.a.a.b.a
Red-bellied piranha	MODERN SPECIES	288		ENSPNAG00000021180	ENSPNAG00000021191	ENSPNAG00000021199	ENSPNAG00000021205	ENSPNAG00000021216	lamc1 (ENSPNAG00000021297)	SHCBP1L (ENSPNAG00000021325)	dhx9 (ENSPNAG00000021343)	casq1a (ENSPNAG00000021387)	ENSPNAG00000021394	chd8 (ENSPNAG00000003683)	cbln12 (ENSPNAG00000021441)	ENSPNAG00000021450	ENSPNAG00000021463	mmp14b (ENSPNAG00000021519) #22	ENSPNAG00000021539 #34	si:ch211-14a17.11 (ENSPNAG00000021556) #35	dhrs1 (ENSPNAG00000021589)	dhrs1 (ENSPNAG00000021625)	homeza (ENSPNAG00000021633)	ENSPNAG00000021669	zp3f.1 (ENSPNAG00000021691)	zp3f.2 (ENSPNAG00000021733)	nedd8l (ENSPNAG00000021761)	ap1g2 (ENSPNAG00000021773)	SLC7A8 (ENSPNAG00000004818) #37	prmt5 (ENSPNAG00000021904) #25	PSMB11 (ENSPNAG00000021917) #30	psmb5 (ENSPNAG00000021948) #29	ENSPNAG00000021951
Mexicana tetra	MODERN SPECIES	7	ENSAMXG00000039845	ENSAMXG00000043339	smg7 (ENSAMXG00000020809)	nmnat2 (ENSAMXG00000020818)	LAMC2 (ENSAMXG00000020835)	lamc1 (ENSAMXG00000020858)	rbm46 (ENSAMXG00000020892)	dhx9 (ENSAMXG00000020901)	ENSAMXG00000032080	ENSAMXG00000035118	casq1a (ENSAMXG00000034607)	ENSAMXG00000020912	ENSAMXG00000041804	cbln12 (ENSAMXG00000031645)	ENSAMXG00000020956	mmp14b (ENSAMXG00000020970) #22	ENSAMXG00000020999	ENSAMXG00000035137 #34	si:ch211-14a17.11 (ENSAMXG00000039187) #35	dhrs1 (ENSAMXG00000030937)	dhrs1 (ENSAMXG00000038938)	dhrs1 (ENSAMXG00000035255)	homeza (ENSAMXG00000025309)	ENSAMXG00000021049	zp3f.1 (ENSAMXG00000021063)	zp3f.2 (ENSAMXG00000021080)	nedd8l (ENSAMXG00000031135)	ap1g2 (ENSAMXG00000021108)	ENSAMXG00000035658 #37	prmt5 (ENSAMXG00000021165) #25	psmb5 (ENSAMXG00000033908) #29
Electric eel	MODERN SPECIES	708													chd8 (ENSEEEG00000018983)	cbln12 (ENSEEEG00000019127)	ENSEEEG00000019128	mmp14b (ENSEEEG00000019134) #22	ENSEEEG00000019358 #34	ENSEEEG00000019360	si:ch211-14a17.11 (ENSEEEG00000019361) #35	dhrs1 (ENSEEEG00000019363)	homeza (ENSEEEG00000019366)	zp3f.1 (ENSEEEG00000019367)	ap1g2 (ENSEEEG00000019375)	ENSEEEG00000019376 #37	prmt5 (ENSEEEG00000019382) #25	ENSEEEG00000019387 #30	psmb5 (ENSEEEG00000019394) #29	ENSEEEG00000019396
Channel catfish	DUPLICATION
Channel catfish	MODERN SPECIES	26	iba57 (ENSIPUG00000006129)	jmjd4 (ENSIPUG00000006140)	snap47 (ENSIPUG00000006150)	ENSIPUG00000006183	WNT9A (ENSIPUG00000006207)	WNT3A (ENSIPUG00000006237)	arf1 (ENSIPUG00000006311)	zgc:63882 (ENSIPUG00000006390)	guk1 (ENSIPUG00000006480)	IPP (ENSIPUG00000006504)	ENSIPUG00000006540	ENSIPUG00000006566	tmie (ENSIPUG00000006597)	pth1r (ENSIPUG00000006617)	si:ch211-14a17.11 (ENSIPUG00000006641) #35	mmp14b (ENSIPUG00000006655) #22	ENSIPUG00000006721	ENSIPUG00000006736
Channel catfish	MODERN SPECIES	26	ENSIPUG00000002222	slc6a9 (ENSIPUG00000002198)	ccdc24 (ENSIPUG00000020168)	zgc:113531 (ENSIPUG00000020155)	b4galt2 (ENSIPUG00000020132)	ENSIPUG00000020119	ENSIPUG00000020107	ENSIPUG00000020095	ENSIPUG00000020089	ENSIPUG00000020081	atp6v0b (ENSIPUG00000020067)	ENSIPUG00000020064	ENSIPUG00000020044	fam50a (ENSIPUG00000020033)	si:ch211-14a17.11 (ENSIPUG00000020030) #35	mmp14b (ENSIPUG00000019993) #22	cbln12 (ENSIPUG00000019982)	chd8 (ENSIPUG00000019891)	GPR25 (ENSIPUG00000018423)	rasal2 (ENSIPUG00000018353)	PLK3 (ENSIPUG00000018304)	cacybp (ENSIPUG00000018267)	mrps14 (ENSIPUG00000018252)	tnn (ENSIPUG00000018170)	kiaa0040 (ENSIPUG00000018161)	ENSIPUG00000018150	tnr (ENSIPUG00000018119)	rfwd2 (ENSIPUG00000018061)	ENSIPUG00000018031	ENSIPUG00000018018	astn1 (ENSIPUG00000017937)
Cyprinoidei	ANCESTRAL SPECIES	1	ENSGT00950000183116.b.a.a.b.a.b.e.b	ENSGT00950000183116.b.a.a.a.a	ENSGT01030000234599.a.b.d.b.a.a	ENSGT01030000234599.a.b.d.a.b.b	ENSGT01080000257720	ENSGT00950000182900.D	ENSGT00940000156907.p.b.b	ENSGT00950000183116.b.b.e	ENSGT00390000019377.a.a.a	ENSGT00940000172304.b	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT00390000007438 #35	ENSGT00940000163731.d	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c.g	ENSGT01030000234567.A.b.d	ENSGT00940000165806	ENSGT00950000182838.B.a.b	ENSGT00940000155856.bb	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	127	ENSGT00950000183116.b.a.a.a.a.e	ENSGT01030000234599.a.b.d.b.a.a.e	ENSGT01030000234599.a.b.d.a.b.b.h	ENSGT01080000257720.a	ENSGT00950000182900.D.e	ENSGT00940000156907.p.b.b.f	ENSGT00950000183116.b.b.e.a.a.b	ENSGT00390000019377.a.a.a.a	ENSGT00940000172304.b.a	ENSGT00940000154888.a.a	ENSGT00940000153649.B.c	ENSGT00940000164991.a.b.c	ENSGT00940000165001.a.b.f	ENSGT00940000162556.E.a.i.b.b.a	ENSGT00940000155384.b.a.c	ENSGT00940000157808.g.c #22	ENSGT00710000106790.x.c #34	ENSGT00390000007438.x #35	ENSGT00940000163731.d	ENSGT00390000007438.w.a #35	ENSGT00940000157797.n	ENSGT00950000182893.a.b.e.b.a	ENSGT01030000234567.A.b.c.g.b	ENSGT01030000234567.A.b.d.d	ENSGT00940000165806.k.a	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b.j	ENSGT00940000158278.e.b.g #37	ENSGT00390000001141.f #25
Cyprininae_a	ANCESTRAL SPECIES	145	ENSGT01030000234599.a.b.d.b.a.a.e	ENSGT01030000234599.a.b.d.a.b.b.h	ENSGT01080000257720.a	ENSGT00950000182900.D.e	ENSGT00940000156907.p.b.b.f	ENSGT00950000183116.b.b.e.a.a.b	ENSGT00390000019377.a.a.a.a	ENSGT00940000172304.b.a	ENSGT00940000154888.a.a	ENSGT00940000153649.B.c	ENSGT00940000164991.a.b.c	ENSGT00940000165001.a.b.f	ENSGT00940000162556.E.a.i.b.b.a.a	ENSGT00940000162556.E.a.i.b.b.a.b	ENSGT00940000155384.b.a.c	ENSGT00940000157808.g.c #22	ENSGT00710000106790.x.c #34	ENSGT00390000007438.x #35	ENSGT00940000163731.d	ENSGT00390000007438.w.a #35	ENSGT00940000157797.n	ENSGT00950000182893.a.b.e.b.a	ENSGT01030000234567.A.b.c.g.b	ENSGT01030000234567.A.b.d.d	ENSGT00940000165806.k.a	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b.j	ENSGT00940000158278.e.b.g #37	ENSGT00390000001141.f #25
Golden-line barbel	MODERN SPECIES	140	ENSSGRG00000039731	apol1 (ENSSGRG00000039732)	ENSSGRG00000039733	pcp4l1 (ENSSGRG00000039734)	hnrnpc (ENSSGRG00000039738)	ENSSGRG00000039741	casq1a (ENSSGRG00000039745)	si:rp71-1g18.1 (ENSSGRG00000039850)	ENSSGRG00000039851	chd8 (ENSSGRG00000039884)	cbln12 (ENSSGRG00000042232)	ENSSGRG00000042233	ENSSGRG00000042235	ENSSGRG00000042237	ENSSGRG00000042239	mmp14b (ENSSGRG00000042253) #22	ENSSGRG00000042523 #34	si:ch211-14a17.11 (ENSSGRG00000042524) #35	dhrs1 (ENSSGRG00000042529)	dhrs1 (ENSSGRG00000042530)	homeza (ENSSGRG00000042532)	zp3f.1 (ENSSGRG00000042534)	zp3f.2 (ENSSGRG00000042535)	ENSSGRG00000042537	ENSSGRG00000042626	ENSSGRG00000042847 #37	prmt5 (ENSSGRG00000043067) #25	PSMB11 (ENSSGRG00000043825) #30	psmb5 (ENSSGRG00000043835) #29	CDH24 (ENSSGRG00000043836) #31	ENSSGRG00000043838
Common carp reference	MODERN SPECIES	29	ENSCCRG00000059000	apol1 (ENSCCRG00000062960)	ENSCCRG00000000367	pcp4l1 (ENSCCRG00000071296)	ENSCCRG00000074084	ENSCCRG00000053834	hnrnpc (ENSCCRG00000070692)	casq1a (ENSCCRG00000058325)	si:rp71-1g18.1 (ENSCCRG00000070810)	ENSCCRG00000053500	chd8 (ENSCCRG00000039202)	cbln12 (ENSCCRG00000039150)	ENSCCRG00000054019	ENSCCRG00000039142	ENSCCRG00000052786	mmp14b (ENSCCRG00000058204) #22	si:ch211-14a17.11 (ENSCCRG00000081839) #35	ENSCCRG00000039107	ENSCCRG00000039039 #34	dhrs1 (ENSCCRG00000039098)	homeza (ENSCCRG00000076536)	zp3f.1 (ENSCCRG00000022638)	nedd8l (ENSCCRG00000053783)	ap1g2 (ENSCCRG00000052573)	ENSCCRG00000033654 #37	prmt5 (ENSCCRG00000070829) #25	ENSCCRG00000061664	psmb5 (ENSCCRG00000014783) #29	ENSCCRG00000076939	ENSCCRG00000078333 #31	ENSCCRG00000079385
Goldfish	MODERN SPECIES	19	ENSCARG00000043151	ENSCARG00000043098	pcp4l1 (ENSCARG00000043072)	ENSCARG00000043023	ENSCARG00000042991	hnrnpc (ENSCARG00000042635)	ENSCARG00000042595	casq1a (ENSCARG00000042416)	si:rp71-1g18.1 (ENSCARG00000042383)	ENSCARG00000042355	chd8 (ENSCARG00000036983)	cbln12 (ENSCARG00000036812)	ENSCARG00000036786	ENSCARG00000036773	ENSCARG00000036764	mmp14b (ENSCARG00000036652) #22	ENSCARG00000036593 #34	si:ch211-14a17.11 (ENSCARG00000019091) #35	ENSCARG00000018952	dhrs1 (ENSCARG00000018930)	homeza (ENSCARG00000018922)	zp3f.1 (ENSCARG00000018909)	zp3f.2 (ENSCARG00000018891)	ENSCARG00000018866	ap1g2 (ENSCARG00000018622)	ENSCARG00000018337 #37	prmt5 (ENSCARG00000017490) #25	psmb5 (ENSCARG00000017408) #29	ENSCARG00000017348 #31	ENSCARG00000017333	ENSCARG00000017326
Cyprininae	ANCESTRAL SPECIES	71	ENSGT00940000169565.a	ENSGT01030000234599.a.b.d.b.a.a.f	ENSGT01030000234599.a.b.d.a.b.b.g	ENSGT01080000257720.b	ENSGT00950000182900.D.f	ENSGT00940000156907.p.b.b.e	ENSGT00950000183116.b.b.e.a.a.a	ENSGT00390000019377.a.a.a.b	ENSGT00940000172304.b.b	ENSGT00940000154888.a.b	ENSGT00940000153649.B.d	ENSGT00940000164991.a.b.d	ENSGT00940000165001.a.b.e	ENSGT00940000162556.E.a.i.b.b.b	ENSGT00940000155384.b.a.d	ENSGT00940000157808.g.d #22	ENSGT00710000106790.x.d #34	ENSGT00390000007438.w.b #35	ENSGT00940000163731.c	ENSGT00940000157797.m	ENSGT00950000182893.a.b.e.b.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c.g.a	ENSGT01030000234567.A.b.d.c	ENSGT00940000165806.k.b	ENSGT00950000182838.B.a.b.i	ENSGT00940000158278.e.b.h #37	ENSGT00390000001141.e #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841.d #29	ENSGT00940000157841.c #29
Cyprininae_a	ANCESTRAL SPECIES	84	ENSGT00940000154368.s.b.c	ENSGT00940000169565.a	ENSGT01030000234599.a.b.d.b.a.a.f	ENSGT01030000234599.a.b.d.a.b.b.g	ENSGT01080000257720.b	ENSGT00950000182900.D.f	ENSGT00940000156907.p.b.b.e	ENSGT00950000183116.b.b.e.a.a.a	ENSGT00390000019377.a.a.a.b	ENSGT00940000172304.b.b	ENSGT00940000154888.a.b	ENSGT00940000153649.B.d	ENSGT00940000164991.a.b.d	ENSGT00940000165001.a.b.e	ENSGT00940000155384.b.a.d	ENSGT00940000157808.g.d #22	ENSGT00710000106790.x.d #34	ENSGT00390000007438.w.b #35	ENSGT00940000163731.c	ENSGT00940000157797.m	ENSGT00950000182893.a.b.e.b.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c.g.a	ENSGT01030000234567.A.b.d.c	ENSGT00940000165806.k.b	ENSGT00950000182838.B.a.b.i	ENSGT00940000158278.e.b.h #37	ENSGT00390000001141.e #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841.d #29	ENSGT00940000157841.c #29
Common carp reference	MODERN SPECIES	21	hbl4 (ENSCCRG00000038558)	ENSCCRG00000058529	mbl2 (ENSCCRG00000065031)	apol1 (ENSCCRG00000059701)	ENSCCRG00000064263	pcp4l1 (ENSCCRG00000081412)	ENSCCRG00000061101	hnrnpc (ENSCCRG00000047805)	ENSCCRG00000055890	casq1a (ENSCCRG00000082893)	si:rp71-1g18.1 (ENSCCRG00000067763)	ENSCCRG00000069959	chd8 (ENSCCRG00000000874)	ENSCCRG00000039986	ENSCCRG00000072031	mmp14b (ENSCCRG00000060060) #22	ENSCCRG00000077136 #34	ENSCCRG00000039018	ENSCCRG00000038998	dhrs1 (ENSCCRG00000053593)	homeza (ENSCCRG00000055991)	ENSCCRG00000052525	zp3f.1 (ENSCCRG00000052531)	zp3f.2 (ENSCCRG00000052540)	ENSCCRG00000052544	ap1g2 (ENSCCRG00000014800)	ENSCCRG00000015023 #37	prmt5 (ENSCCRG00000012565) #25	ENSCCRG00000056212 #30	ENSCCRG00000003989 #31	ENSCCRG00000081403
Golden-line barbel	MODERN SPECIES	20	ENSSGRG00000007838	apol1 (ENSSGRG00000007841)	ENSSGRG00000007843	PCP4L1 (ENSSGRG00000007845)	ENSSGRG00000007846	hnrnpc (ENSSGRG00000007849)	ENSSGRG00000007863	ENSSGRG00000007864	casq1a (ENSSGRG00000007866)	si:rp71-1g18.1 (ENSSGRG00000008281)	TOX4 (ENSSGRG00000008282)	chd8 (ENSSGRG00000008311)	cbln12 (ENSSGRG00000010234)	ENSSGRG00000010235	ENSSGRG00000010237	mmp14b (ENSSGRG00000010268) #22	ENSSGRG00000011559 #34	si:ch211-14a17.11 (ENSSGRG00000011560) #35	ENSSGRG00000011561	dhrs1 (ENSSGRG00000011563)	homeza (ENSSGRG00000011564)	zp3f.1 (ENSSGRG00000011565)	zp3f.2 (ENSSGRG00000011580)	ENSSGRG00000011601	ap1g2 (ENSSGRG00000011759)	ENSSGRG00000013632 #37	prmt5 (ENSSGRG00000013638) #25	PSMB11 (ENSSGRG00000014305) #30	psmb5 (ENSSGRG00000014306) #29
Goldfish	MODERN SPECIES	11	ENSCARG00000000397	apol1 (ENSCARG00000000421)	ENSCARG00000000437	pcp4l1 (ENSCARG00000000440)	ENSCARG00000000460	hnrnpc (ENSCARG00000000496)	ENSCARG00000000522	casq1a (ENSCARG00000000567)	si:rp71-1g18.1 (ENSCARG00000000643)	TOX4 (ENSCARG00000000651)	chd8 (ENSCARG00000000835)	cbln12 (ENSCARG00000001242)	ENSCARG00000001247	ENSCARG00000001250	ENSCARG00000001253	mmp14b (ENSCARG00000001257) #22	ENSCARG00000001288 #34	si:ch211-14a17.11 (ENSCARG00000001321) #35	ENSCARG00000001342	dhrs1 (ENSCARG00000001373)	homeza (ENSCARG00000001381)	zp3f.2 (ENSCARG00000001401)	ENSCARG00000001407	ap1g2 (ENSCARG00000001429)	prmt5 (ENSCARG00000001473) #25	ENSCARG00000001544 #30	psmb5 (ENSCARG00000001549) #29	ENSCARG00000001556	ENSCARG00000001560	fbp2 (ENSCARG00000001564)	uggt1 (ENSCARG00000001686)
Zebrafish	MODERN SPECIES	11	ENSDARG00000053845	cbln9 (ENSDARG00000030254)	apol1 (ENSDARG00000007425)	ENSDARG00000023185	pcp4l1 (ENSDARG00000023181)	DCAF8 (ENSDARG00000000324)	hnrnpc (ENSDARG00000053810)	ENSDARG00000053802	casq1a (ENSDARG00000038716)	si:rp71-1g18.1 (ENSDARG00000053792)	ENSDARG00000002031	chd8 (ENSDARG00000075543)	cbln12 (ENSDARG00000068232)	ENSDARG00000068240	ENSDARG00000075116	mmp14b (ENSDARG00000008388) #22	ENSDARG00000054290 #34	C2H14orf119 (ENSDARG00000054292) #35	ENSDARG00000076534	dhrs1 (ENSDARG00000054300)	homeza (ENSDARG00000054304)	ENSDARG00000093723	zp3f.1 (ENSDARG00000038720)	zp3f.2 (ENSDARG00000054313)	ap1g2 (ENSDARG00000054337)	nedd8l (ENSDARG00000103472)	ENSDARG00000054343 #37	prmt5 (ENSDARG00000079605) #25	psmb11a (ENSDARG00000108530) #30	psmb5 (ENSDARG00000075445) #29	CDH24 (ENSDARG00000077996) #31
Euteleosteomorpha	ANCESTRAL SPECIES	121	ENSGT00940000166346	ENSGT00940000169565	ENSGT01030000234599.a.b.d.b.a.a	ENSGT01030000234599.a.b.d.a.b.b	ENSGT00940000156907.p.b.a	ENSGT00950000182900.D	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000164014.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT01030000235234	ENSGT00390000007438 #35	ENSGT01040000240385.C	ENSGT00940000160531	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30
Acanthomorphata	ANCESTRAL SPECIES	57	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00940000167524	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000164014.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT01030000235234	ENSGT00390000007438 #35	ENSGT01040000240385.C	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT01030000234567.A.b.d	ENSGT00940000165806	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30
Euacanthomorphacea	ANCESTRAL SPECIES	4	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00940000167524	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000164014.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT01030000235234	ENSGT00390000007438 #35	ENSGT01040000240385.C	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29
Percomorphaceae	ANCESTRAL SPECIES	6	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00940000167524	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000164014.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT01030000235234	ENSGT00390000007438 #35	ENSGT01040000240385.C	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29
Tiger tail seahorse	MODERN SPECIES	110	ENSHCOG00000015603	ENSHCOG00000015681	eif2b5 (ENSHCOG00000015732)	ENSHCOG00000015688	ENSHCOG00000015828	klhl40a (ENSHCOG00000015837)	hhatla (ENSHCOG00000015876)	ctdsplb (ENSHCOG00000015895)	plcd1b (ENSHCOG00000015906)	oxsr1a (ENSHCOG00000016468)	casq1a (ENSHCOG00000016521)	ENSHCOG00000016526	ENSHCOG00000016531	chd8 (ENSHCOG00000016611)	cbln12 (ENSHCOG00000016636)	mmp14b (ENSHCOG00000000769) #22	ENSHCOG00000016677 #34	si:ch211-14a17.11 (ENSHCOG00000016679) #35	dhrs1 (ENSHCOG00000016684)	homeza (ENSHCOG00000016687)	ENSHCOG00000016700	zp3f.1 (ENSHCOG00000016711)	zp3f.2 (ENSHCOG00000016749)	nedd8l (ENSHCOG00000016752)	ap1g2 (ENSHCOG00000016812)	prmt5 (ENSHCOG00000016863) #25	psmb5 (ENSHCOG00000016870) #29	CDH24 (ENSHCOG00000016908) #31
Percomorphaceae_B	ANCESTRAL SPECIES	8	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00940000167524	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000164014.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT01030000235234.a	ENSGT00390000007438 #35	ENSGT01040000240385.C	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29
Percomorphaceae_C	ANCESTRAL SPECIES	6	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00940000167524	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000164014.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT00390000007438 #35	ENSGT01040000240385.C	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31
Percomorphaceae_D	ANCESTRAL SPECIES	6	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00940000167524	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000164014.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT00390000007438 #35	ENSGT01040000240385.C	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31
Anabantaria	ANCESTRAL SPECIES	8	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00940000167524	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000164014.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00390000007438 #35	ENSGT01040000240385.C	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31	ENSGT00940000157990.a.a
Anabantoidei	ANCESTRAL SPECIES	18	ENSGT01040000240451.a.b.b.a.a	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00940000167524	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00390000007438 #35	ENSGT01040000240385.C	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31	ENSGT00940000157990.a.a
Climbing perch	MODERN SPECIES	8	ctdsplb (ENSATEG00000006635)	hhatla (ENSATEG00000006677)	klhl40a (ENSATEG00000006760)	ENSATEG00000006794	ENSATEG00000006858	ENSATEG00000006871	ENSATEG00000006953	casq1a (ENSATEG00000007039)	ENSATEG00000007082	ENSATEG00000007098	ENSATEG00000007091	chd8 (ENSATEG00000007108)	cbln12 (ENSATEG00000007277)	ENSATEG00000007288	ENSATEG00000007303	mmp14b (ENSATEG00000007310) #22	si:ch211-14a17.11 (ENSATEG00000007359) #35	ENSATEG00000026551	dhrs1 (ENSATEG00000007375)	ENSATEG00000007401	homeza (ENSATEG00000007417)	ENSATEG00000007689	zp3f.1 (ENSATEG00000007431)	zp3f.2 (ENSATEG00000007728)	nedd8l (ENSATEG00000008031)	ap1g2 (ENSATEG00000007913)	ENSATEG00000027493 #37	prmt5 (ENSATEG00000008281) #25	ENSATEG00000008341 #30	psmb5 (ENSATEG00000008354) #29	ENSATEG00000008390 #31
Siamese fighting fish	MODERN SPECIES	8	ENSBSLG00000015556	oxsr1a (ENSBSLG00000015235)	ctdsplb (ENSBSLG00000014966)	hhatla (ENSBSLG00000014884)	klhl40a (ENSBSLG00000014870)	eif2b5 (ENSBSLG00000014167)	ENSBSLG00000014081	ENSBSLG00000014034	casq1a (ENSBSLG00000013383)	ENSBSLG00000013031	ENSBSLG00000012853	chd8 (ENSBSLG00000010385)	cbln12 (ENSBSLG00000010353)	ENSBSLG00000010349	ENSBSLG00000010340	mmp14b (ENSBSLG00000010039) #22	si:ch211-14a17.11 (ENSBSLG00000009997) #35	ENSBSLG00000009902	dhrs1 (ENSBSLG00000009880)	homeza (ENSBSLG00000009874)	zp3f.1 (ENSBSLG00000009808)	zp3f.2 (ENSBSLG00000009711)	nedd8l (ENSBSLG00000009341)	ap1g2 (ENSBSLG00000008832)	prmt5 (ENSBSLG00000008788) #25	PSMB11 (ENSBSLG00000008746) #30	psmb5 (ENSBSLG00000008741) #29	ENSBSLG00000008696 #31	carmil3 (ENSBSLG00000008401)	rem2 (ENSBSLG00000008350) #24	ENSBSLG00000008320
Zig-zag eel	MODERN SPECIES	8	hhatla (ENSMAMG00000016708)	klhl40a (ENSMAMG00000016692)	ENSMAMG00000016671	ENSMAMG00000016658	ENSMAMG00000016617	ENSMAMG00000016525	casq1a (ENSMAMG00000016503)	ENSMAMG00000016492	ENSMAMG00000016485	ENSMAMG00000016429	chd8 (ENSMAMG00000016297)	cbln12 (ENSMAMG00000016282)	ENSMAMG00000016254	ENSMAMG00000016237	ENSMAMG00000024556	mmp14b (ENSMAMG00000016212) #22	si:ch211-14a17.11 (ENSMAMG00000016136) #35	ENSMAMG00000016132	ENSMAMG00000015840	ENSMAMG00000024680	ENSMAMG00000027434	ENSMAMG00000015803	ENSMAMG00000015775	atpsckmt (ENSMAMG00000015757)	marchf6 (ENSMAMG00000015676)	ANKRD33B (ENSMAMG00000015655)	ctnnd2b (ENSMAMG00000015516)	ENSMAMG00000015480	lyn (ENSMAMG00000015472)	urod (ENSMAMG00000015427)	zswim5 (ENSMAMG00000024560)
Carangaria	ANCESTRAL SPECIES	5	ENSGT01040000240451.a.b.b.a.a	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00940000167524	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT00390000007438 #35	ENSGT01040000240385.C	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00940000165806	ENSGT00950000182838.B.a.b	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29
Carangaria_A	ANCESTRAL SPECIES	2	ENSGT01040000240451.a.b.b.a.a	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00940000167524	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT00390000007438 #35	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000165806	ENSGT00950000182838.B.a.b	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31	ENSGT00940000157990.a.a
Seriola	ANCESTRAL SPECIES		ENSGT01040000240451.a.b.b.a.a	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00940000167524	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT00390000007438 #35	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000165806	ENSGT00950000182838.B.a.b	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31	ENSGT00940000157990.a.a
Yellowtail amberjack	MODERN SPECIES	3040	ctdsplb (ENSSLDG00000002073)	hhatla (ENSSLDG00000002011)	klhl40a (ENSSLDG00000001994)	ENSSLDG00000001978	ENSSLDG00000001968	eif2b5 (ENSSLDG00000001909)	selenoj (ENSSLDG00000001814)	casq1a (ENSSLDG00000001747)	ENSSLDG00000001726	ENSSLDG00000001713	TOX4 (ENSSLDG00000001701)	chd8 (ENSSLDG00000001679)	cbln12 (ENSSLDG00000001667)	ENSSLDG00000001662	ENSSLDG00000001653	mmp14b (ENSSLDG00000001597) #22	ENSSLDG00000001566 #34	si:ch211-14a17.11 (ENSSLDG00000001527) #35	dhrs1 (ENSSLDG00000001479)	homeza (ENSSLDG00000001473)	ENSSLDG00000001438	zp3f.2 (ENSSLDG00000001295)	zp3f.1 (ENSSLDG00000000945)	ENSSLDG00000000888	ap1g2 (ENSSLDG00000000874)	ENSSLDG00000000855 #37	prmt5 (ENSSLDG00000000781) #25	PSMB11 (ENSSLDG00000000635) #30	psmb5 (ENSSLDG00000000621) #29	CDH24 (ENSSLDG00000000549) #31	carmil3 (ENSSLDG00000000412)
Greater amberjack	MODERN SPECIES	51							casq1a (ENSSDUG00000012616)	ENSSDUG00000012601	ENSSDUG00000012589	ENSSDUG00000012572	chd8 (ENSSDUG00000012439)	cbln12 (ENSSDUG00000012306)	ENSSDUG00000012289	ENSSDUG00000012281	ENSSDUG00000012274	mmp14b (ENSSDUG00000012237) #22	ENSSDUG00000012189 #34	ENSSDUG00000012164 #34	si:ch211-14a17.11 (ENSSDUG00000012158) #35	dhrs1 (ENSSDUG00000012134)	homeza (ENSSDUG00000012127)	ENSSDUG00000012085	zp3f.1 (ENSSDUG00000012067)	zp3f.2 (ENSSDUG00000011997)	ENSSDUG00000011979	ENSSDUG00000011900	ENSSDUG00000011845	ENSSDUG00000011800 #37	prmt5 (ENSSDUG00000011753) #25	PSMB11 (ENSSDUG00000011703) #30	psmb5 (ENSSDUG00000011695) #29
Barramundi perch	MODERN SPECIES	69	ctdsplb (ENSLCAG00010005829)	hhatla (ENSLCAG00010005871)	klhl40a (ENSLCAG00010005883)	ENSLCAG00010005911	ENSLCAG00010006010	eif2b5 (ENSLCAG00010006043)	selenoj (ENSLCAG00010006122)	casq1a (ENSLCAG00010006140)	ENSLCAG00010006171	ENSLCAG00010006174	ENSLCAG00010006179	chd8 (ENSLCAG00010006333)	cbln12 (ENSLCAG00010006800)	ENSLCAG00010006801	ENSLCAG00010006803	mmp14b (ENSLCAG00010006807) #22	ENSLCAG00010006815 #34	si:ch211-14a17.11 (ENSLCAG00010006824) #35	ENSLCAG00010006832	dhrs1 (ENSLCAG00010006845)	homeza (ENSLCAG00010006853)	zp3f.1 (ENSLCAG00010006862)	zp3f.2 (ENSLCAG00010006880)	ENSLCAG00010006890	ap1g2 (ENSLCAG00010006944)	ENSLCAG00010007133 #37	prmt5 (ENSLCAG00010007248) #25	PSMB11 (ENSLCAG00010007390) #30	psmb5 (ENSLCAG00010007393) #29	ENSLCAG00010007397 #31	carmil3 (ENSLCAG00010007454)
Pleuronectoidei	ANCESTRAL SPECIES	1	ENSGT00940000158392.e.a	ENSGT01040000240451.a.b.b.a.a	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00940000167524	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT00390000007438 #35	ENSGT01040000240385.C	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31
Turbot	MODERN SPECIES	19	oxsr1a (ENSSMAG00000013455)	plcd1b (ENSSMAG00000013538)	ctdsplb (ENSSMAG00000013641)	hhatla (ENSSMAG00000013692)	klhl40a (ENSSMAG00000013751)	ENSSMAG00000013848	ENSSMAG00000013887	ENSSMAG00000013864	ENSSMAG00000013893	casq1a (ENSSMAG00000013960)	ENSSMAG00000013991	ENSSMAG00000013998	chd8 (ENSSMAG00000014060)	cbln12 (ENSSMAG00000034298)	ENSSMAG00000014147	mmp14b (ENSSMAG00000014173) #22	si:ch211-14a17.11 (ENSSMAG00000014254) #35	ENSSMAG00000029161	dhrs1 (ENSSMAG00000014263)	homeza (ENSSMAG00000014286)	zp3f.2 (ENSSMAG00000014460)	ap1g2 (ENSSMAG00000014531)	ENSSMAG00000014603 #37	prmt5 (ENSSMAG00000014662) #25	psmb5 (ENSSMAG00000014870) #29	ENSSMAG00000014891 #31	rem2 (ENSSMAG00000015126) #24	ENSSMAG00000015133	ENSSMAG00000015142	abhd4 (ENSSMAG00000015153) #17	dad1 (ENSSMAG00000025112) #16
Tongue sole	MODERN SPECIES	12	jph1b (ENSCSEG00000021170)	ENSCSEG00000021169	ENSCSEG00000021168	tmem68 (ENSCSEG00000021167)	xkr4 (ENSCSEG00000021166)	ENSCSEG00000021165	ENSCSEG00000021164	ENSCSEG00000021163	ENSCSEG00000021162	exoc3 (ENSCSEG00000021161)	ENSCSEG00000021159	chd8 (ENSCSEG00000021155)	cbln12 (ENSCSEG00000021149)	ENSCSEG00000021148	ENSCSEG00000021147	mmp14b (ENSCSEG00000021146) #22	ENSCSEG00000021145 #34	si:ch211-14a17.11 (ENSCSEG00000021144) #35	ENSCSEG00000021143	dhrs1 (ENSCSEG00000021142)	homeza (ENSCSEG00000021141)	ENSCSEG00000021140	zp3f.1 (ENSCSEG00000021139)	zp3f.2 (ENSCSEG00000021138)	nedd8l (ENSCSEG00000021137)	ap1g2 (ENSCSEG00000021132)	ENSCSEG00000021129 #37	prmt5 (ENSCSEG00000021126) #25	PSMB11 (ENSCSEG00000021119) #30	psmb5 (ENSCSEG00000021118) #29	ENSCSEG00000021117
Eupercaria	ANCESTRAL SPECIES	22	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00940000167524	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000162556.E.a.m.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT00390000007438 #35	ENSGT01040000240385.C	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31
Eupecaria_A	ANCESTRAL SPECIES	8	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00940000167524	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000162556.E.a.m.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT00390000007438 #35	ENSGT01040000240385.B.d	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31
Ballan wrasse	MODERN SPECIES	10	hhatla (ENSLBEG00000003096)	klhl40a (ENSLBEG00000003075)	ENSLBEG00000003062	ENSLBEG00000003046	eif2b5 (ENSLBEG00000002990)	selenoj (ENSLBEG00000002878)	casq1a (ENSLBEG00000002836)	ENSLBEG00000002815	ENSLBEG00000002792	ENSLBEG00000002722	ENSLBEG00000002673	cbln12 (ENSLBEG00000002651)	ENSLBEG00000002630	ENSLBEG00000002617	ENSLBEG00000002594	mmp14b (ENSLBEG00000002548) #22	ENSLBEG00000002482	si:ch211-14a17.11 (ENSLBEG00000002435) #35	ENSLBEG00000002377	dhrs1 (ENSLBEG00000002331)	homeza (ENSLBEG00000002308)	ENSLBEG00000002289	zp3f.2 (ENSLBEG00000002220)	zp3f.1 (ENSLBEG00000001878)	nedd8l (ENSLBEG00000001820)	ap1g2 (ENSLBEG00000001727)
Eupecaria_B	ANCESTRAL SPECIES	8	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00940000167524	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000162556.E.a.m.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT00390000007438 #35	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31	ENSGT00940000157990.a.a
Perciformes	ANCESTRAL SPECIES	5	ENSGT01040000240451.a.b.b.a.a	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00940000167524	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT00390000007438 #35	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31	ENSGT00940000157990.a.a
Cottioidei	ANCESTRAL SPECIES	15	ENSGT00940000158392.e.a	ENSGT01040000240451.a.b.b.a.a	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00940000167524	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT00740000116468	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT00390000007438 #35	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31	ENSGT00940000157990.a.a
Lumpfish	MODERN SPECIES	8	oxsr1a (ENSCLMG00005014307)	plcd1b (ENSCLMG00005011537)	ctdsplb (ENSCLMG00005011497)	ENSCLMG00005011491	klhl40a (ENSCLMG00005011196)	ENSCLMG00005011157	ENSCLMG00005011156	eif2b5 (ENSCLMG00005011110)	selenoj (ENSCLMG00005011098)	casq1a (ENSCLMG00005011095)	ENSCLMG00005011093	ENSCLMG00005011091	chd8 (ENSCLMG00005009595)	cbln12 (ENSCLMG00005009574)	ENSCLMG00005009572	mmp14b (ENSCLMG00005009083) #22	ENSCLMG00005009080 #34	si:ch211-14a17.11 (ENSCLMG00005009079) #35	KLHL10 (ENSCLMG00005009078)	dhrs1 (ENSCLMG00005009076)	dhrs1 (ENSCLMG00005009075)	homeza (ENSCLMG00005009074)	ENSCLMG00005009073	zp3f.1 (ENSCLMG00005009071)	ENSCLMG00005009035	ENSCLMG00005009032	zp3f.1 (ENSCLMG00005009028)	ENSCLMG00005009019	ENSCLMG00005008985	ENSCLMG00005008984	zp3f.1 (ENSCLMG00005008983)
Stickleback	MODERN SPECIES	2	zp3f.2 (ENSGACG00000014189)	homeza (ENSGACG00000014188)	dhrs1 (ENSGACG00000014168)	ENSGACG00000014164	eif2b5 (ENSGACG00000014136)	selenoj (ENSGACG00000014131)	casq1a (ENSGACG00000014122)	ENSGACG00000014121	ENSGACG00000014117	ENSGACG00000014113	ENSGACG00000014107	chd8 (ENSGACG00000014096)	cbln12 (ENSGACG00000014086)	ENSGACG00000014076	ENSGACG00000014075	mmp14b (ENSGACG00000014069) #22	ENSGACG00000014063 #34	si:ch211-14a17.11 (ENSGACG00000014060) #35	CUL3 (ENSGACG00000014049)	ENSGACG00000014043	ap1s3b (ENSGACG00000014035)	scg2b (ENSGACG00000014032)	acsl3b (ENSGACG00000014028)	pax3a (ENSGACG00000014017)	ENSGACG00000014008	EPHB1 (ENSGACG00000013951)	gpc1b (ENSGACG00000013944)	ENSGACG00000013943	ENSGACG00000013942	NYAP2 (ENSGACG00000013940)	COL4A4 (ENSGACG00000013929)
Perciformes_a	ANCESTRAL SPECIES	24	ENSGT01040000240451.a.b.b.a.a	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00940000167524	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT00390000007438 #35	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31	ENSGT00940000157990.a.a	ENSGT00940000160062.a #24
Channel bull blenny	MODERN SPECIES	8	hhatla (ENSCGOG00000008433)	klhl40a (ENSCGOG00000008416)	ENSCGOG00000008371	ENSCGOG00000008366	eif2b5 (ENSCGOG00000007878)	selenoj (ENSCGOG00000007866)	casq1a (ENSCGOG00000007213)	ENSCGOG00000007188	ENSCGOG00000007185	ENSCGOG00000007183	chd8 (ENSCGOG00000006069)	cbln12 (ENSCGOG00000006042)	ENSCGOG00000006040	ENSCGOG00000006039	ENSCGOG00000006038	mmp14b (ENSCGOG00000005823) #22	si:ch211-14a17.11 (ENSCGOG00000005817) #35	dhrs1 (ENSCGOG00000005802)	homeza (ENSCGOG00000005794)	zp3f.1 (ENSCGOG00000005642)	zp3f.2 (ENSCGOG00000005632)	nedd8l (ENSCGOG00000005631)	ap1g2 (ENSCGOG00000003486)	ENSCGOG00000002565 #37	prmt5 (ENSCGOG00000002081) #25	PSMB11 (ENSCGOG00000002053) #30	psmb5 (ENSCGOG00000002044) #29	CDH24 (ENSCGOG00000002035) #31	ENSCGOG00000002032	carmil3 (ENSCGOG00000001989)	rem2 (ENSCGOG00000001977) #24
Pike perch	MODERN SPECIES	207	ctdsplb (ENSSLUG00000013593)	hhatla (ENSSLUG00000013582)	klhl40a (ENSSLUG00000013577)	ENSSLUG00000013570	ENSSLUG00000013561	eif2b5 (ENSSLUG00000013179)	selenoj (ENSSLUG00000013151)	casq1a (ENSSLUG00000012996)	ENSSLUG00000012974	ENSSLUG00000012970	ENSSLUG00000012967	chd8 (ENSSLUG00000009875)	cbln12 (ENSSLUG00000009649)	ENSSLUG00000009641	ENSSLUG00000009636	mmp14b (ENSSLUG00000009371) #22	ENSSLUG00000009346 #34	si:ch211-14a17.11 (ENSSLUG00000009344) #35
Eupecaria_C	ANCESTRAL SPECIES	10	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00940000167524	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000162556.E.a.m.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT00390000007438 #35	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31	ENSGT00940000157990.a.a
Gilthead seabream	MODERN SPECIES	13	ctdsplb (ENSSAUG00010023557)	hhatla (ENSSAUG00010023547)	klhl40a (ENSSAUG00010023541)	ENSSAUG00010023274	ENSSAUG00010023267	eif2b5 (ENSSAUG00010023245)	selenoj (ENSSAUG00010023244)	casq1a (ENSSAUG00010023228)	ENSSAUG00010023227	ENSSAUG00010023224	ENSSAUG00010023223	chd8 (ENSSAUG00010020870)	cbln12 (ENSSAUG00010020854)	ENSSAUG00010020853	ENSSAUG00010020852	mmp14b (ENSSAUG00010020774) #22	si:ch211-14a17.11 (ENSSAUG00010020770) #35	dhrs1 (ENSSAUG00010020768)	homeza (ENSSAUG00010020766)	ENSSAUG00010020764	zp3f.1 (ENSSAUG00010020760)	zp3f.2 (ENSSAUG00010020756)	nedd8l (ENSSAUG00010020755)	ap1g2 (ENSSAUG00010020752)	ENSSAUG00010018919 #37	prmt5 (ENSSAUG00010018781) #25	PSMB11 (ENSSAUG00010018769) #30	psmb5 (ENSSAUG00010018758) #29	ENSSAUG00010018752 #31	carmil3 (ENSSAUG00010018666)	ENSSAUG00010018652
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	8	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00940000167524	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000162556.E.a.m.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT00390000007438 #35	ENSGT01070000253822.F	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31
European seabass	MODERN SPECIES		ctdsplb (ENSDLAG00005023012)	hhatla (ENSDLAG00005022928)	klhl40a (ENSDLAG00005022923)	ENSDLAG00005022866	ENSDLAG00005033125	ENSDLAG00005022608	ENSDLAG00005022565	casq1a (ENSDLAG00005022464)	ENSDLAG00005022454	ENSDLAG00005022443	chd8 (ENSDLAG00005020361)	cbln12 (ENSDLAG00005020246)	ENSDLAG00005031655	ENSDLAG00005032091	ENSDLAG00005020240	mmp14b (ENSDLAG00005019935) #22	si:ch211-14a17.11 (ENSDLAG00005029260) #35	homeza (ENSDLAG00005030477)	ENSDLAG00005026545	zp3f.1 (ENSDLAG00005019822)	zp3f.2 (ENSDLAG00005019805)	nedd8l (ENSDLAG00005019751)	ap1g2 (ENSDLAG00005019375)	ENSDLAG00005018770 #37	prmt5 (ENSDLAG00005018348) #25	ENSDLAG00005018299 #30	psmb5 (ENSDLAG00005018277) #29	ENSDLAG00005028484 #31	carmil3 (ENSDLAG00005018141)	rem2 (ENSDLAG00005027657) #24	ENSDLAG00005018089
Large yellow croaker	MODERN SPECIES	481	ENSLCRG00005005734	eif2b5 (ENSLCRG00005005742)	selenoj (ENSLCRG00005005893)	selenoj (ENSLCRG00005005895)	casq1a (ENSLCRG00005005904)	ENSLCRG00005005932	ENSLCRG00005005934	ENSLCRG00005005935	ENSLCRG00005005936	ENSLCRG00005005938	chd8 (ENSLCRG00005005960)	cbln12 (ENSLCRG00005007937)	ENSLCRG00005007940	ENSLCRG00005007941	ENSLCRG00005007943	mmp14b (ENSLCRG00005007947) #22	ENSLCRG00005007952 #34	si:ch211-14a17.11 (ENSLCRG00005007953) #35	ENSLCRG00005007960	dhrs1 (ENSLCRG00005007970)	homeza (ENSLCRG00005007972)	ENSLCRG00005007973	zp3f.1 (ENSLCRG00005007977)	zp3f.2 (ENSLCRG00005007985)	nedd8l (ENSLCRG00005007989)	ap1g2 (ENSLCRG00005008047)	SLC7A8 (ENSLCRG00005011039) #37	prmt5 (ENSLCRG00005011045) #25	ENSLCRG00005011079 #37	PSMB11 (ENSLCRG00005011085) #30	psmb5 (ENSLCRG00005011115) #29
Tetraodontidae	ANCESTRAL SPECIES	13	ENSGT01040000240451.a.b.b.a.a	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00940000167524	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT00390000007438 #35	ENSGT01040000240385.C	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31	ENSGT00940000157990.a.a
Tetraodon	MODERN SPECIES	6	oxsr1a (ENSTNIG00000007922)	plcd1b (ENSTNIG00000007923)	ctdsplb (ENSTNIG00000007924)	hhatla (ENSTNIG00000007925)	klhl40a (ENSTNIG00000007926)	ENSTNIG00000007927	eif2b5 (ENSTNIG00000007928)	selenoj (ENSTNIG00000007929)	casq1a (ENSTNIG00000007930)	ENSTNIG00000000413	ENSTNIG00000007931	chd8 (ENSTNIG00000007932)	cbln12 (ENSTNIG00000000841)	ENSTNIG00000007933	ENSTNIG00000007934	mmp14b (ENSTNIG00000007935) #22	ENSTNIG00000007936 #34	si:ch211-14a17.11 (ENSTNIG00000007937) #35	dhrs1 (ENSTNIG00000007938)	ENSTNIG00000007939 #34	si:ch211-14a17.11 (ENSTNIG00000007940) #35	ENSTNIG00000007941	dhrs1 (ENSTNIG00000007942)	homeza (ENSTNIG00000000498)	zp3f.1 (ENSTNIG00000007943)	zp3f.2 (ENSTNIG00000007944)	nedd8l (ENSTNIG00000007945)	ap1g2 (ENSTNIG00000007946)	ENSTNIG00000007947 #37	prmt5 (ENSTNIG00000007948) #25	PSMB11 (ENSTNIG00000001142) #30
Fugu	MODERN SPECIES	14	plcd1b (ENSTRUG00000009158)	ctdsplb (ENSTRUG00000008918)	hhatla (ENSTRUG00000027448)	klhl40a (ENSTRUG00000008522)	ENSTRUG00000033086	ENSTRUG00000031848	selenoj (ENSTRUG00000007784)	casq1a (ENSTRUG00000020903)	ENSTRUG00000007394	ENSTRUG00000027861	ENSTRUG00000006959	chd8 (ENSTRUG00000006682)	cbln12 (ENSTRUG00000032890)	ENSTRUG00000030277	ENSTRUG00000026236	mmp14b (ENSTRUG00000005793) #22	ENSTRUG00000023910 #34	si:ch211-14a17.11 (ENSTRUG00000005451) #35	ENSTRUG00000029650	dhrs1 (ENSTRUG00000005200)	homeza (ENSTRUG00000005126)	ENSTRUG00000004916	ap1g2 (ENSTRUG00000004157)	ENSTRUG00000003224 #37	prmt5 (ENSTRUG00000002234) #25	PSMB11 (ENSTRUG00000032620) #30	psmb5 (ENSTRUG00000032414) #29	ENSTRUG00000017632 #31	carmil3 (ENSTRUG00000017665)	rem2 (ENSTRUG00000000259) #24	ENSTRUG00000030657
Ovalentaria	ANCESTRAL SPECIES	5	ENSGT01040000240451.a.b.b.a.a	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00940000167524	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT01030000235234.a	ENSGT00390000007438 #35	ENSGT01040000240385.C	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29
Atherinomorphae	ANCESTRAL SPECIES	4	ENSGT01040000240451.a.b.b.a.a	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00940000167524	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT01030000235234.a	ENSGT00390000007438 #35	ENSGT01040000240385.C	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31
Cyprinodontiformes	ANCESTRAL SPECIES	5	ENSGT01040000240451.a.b.b.a.a	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00940000167524	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT01030000235234.a	ENSGT00390000007438 #35	ENSGT01040000240385.C	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31
Aplocheiloidei	ANCESTRAL SPECIES	19	ENSGT01040000240451.a.b.b.a.a	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT01060000249153	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT00390000007438 #35	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31	ENSGT00940000157990.a.a	ENSGT00980000198654	ENSGT00940000160062.a #24
Mangrove rivulus	MODERN SPECIES	55	ctdsplb (ENSKMAG00000019841)	hhatla (ENSKMAG00000019867)	klhl40a (ENSKMAG00000019905)	ENSKMAG00000019923	ENSKMAG00000019945	eif2b5 (ENSKMAG00000019967)	selenoj (ENSKMAG00000020012)	casq1a (ENSKMAG00000020035)	ENSKMAG00000020060	ENSKMAG00000020086	ENSKMAG00000020069	chd8 (ENSKMAG00000020106)	cbln12 (ENSKMAG00000020142)	ENSKMAG00000020155	ENSKMAG00000020172	mmp14b (ENSKMAG00000020187) #22	ENSKMAG00000020228 #34	si:ch211-14a17.11 (ENSKMAG00000020254) #35	dhrs1 (ENSKMAG00000020266)	homeza (ENSKMAG00000020275)	zp3f.1 (ENSKMAG00000020285)	zp3f.2 (ENSKMAG00000020293)	ap1g2 (ENSKMAG00000020315)	nedd8l (ENSKMAG00000020347)	prmt5 (ENSKMAG00000020370) #25	PSMB11 (ENSKMAG00000020416) #30	psmb5 (ENSKMAG00000020473) #29	ENSKMAG00000020501 #31	carmil3 (ENSKMAG00000020527)	ENSKMAG00000020571	rem2 (ENSKMAG00000020585) #24
Turquoise killifish	MODERN SPECIES	1618	HHATLA (ENSNFUG00015009429)	ENSNFUG00015009411	klhl40a (ENSNFUG00015009402)	ENSNFUG00015009040	ENSNFUG00015008947	EIF2B5 (ENSNFUG00015008864)	OLA.3887 (ENSNFUG00015008857)	casq1a (ENSNFUG00015008804)	Nfu_g_1_020616 (ENSNFUG00015008785)	ENSNFUG00015008777	ENSNFUG00015008771	chd8 (ENSNFUG00015008409)	cbln12 (ENSNFUG00015008372)	ENSNFUG00015008368	SALL2 (ENSNFUG00015008366)	MMP14B (ENSNFUG00015007461) #22	ENSNFUG00015007383 #34	si:ch211-14a17.11 (ENSNFUG00015007379) #35	DHRS1 (ENSNFUG00015007373)	HOMEZ (ENSNFUG00015007371)	NEDD8 (ENSNFUG00015007349)	ap1g2 (ENSNFUG00015007317)	prmt5 (ENSNFUG00015007261) #25	PSMB11 (ENSNFUG00015007228) #30	ENSNFUG00015007220	ENSNFUG00015007188 #31	ENSNFUG00015007185	ENSNFUG00015007181	ENSNFUG00015007179	REM2 (ENSNFUG00015007175) #24	AL954696.1 (ENSNFUG00015007164)
Cyprinodontoidei	ANCESTRAL SPECIES	2	ENSGT01040000240451.a.b.b.a.a	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00940000167524	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT01030000235234.a	ENSGT00390000007438 #35	ENSGT01040000240385.C	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31
NAME_4	ANCESTRAL SPECIES	9	ENSGT01040000240451.a.b.b.a.a	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00940000167524	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT01030000235234.a	ENSGT00390000007438 #35	ENSGT01040000240385.C	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31
Sheepshead minnow	MODERN SPECIES	304			ENSCVAG00000005870	ENSCVAG00000005881	ENSCVAG00000005889	selenoj (ENSCVAG00000005955)	casq1a (ENSCVAG00000005973)	ENSCVAG00000005980	ENSCVAG00000005985	ENSCVAG00000005992	ENSCVAG00000006010	cbln12 (ENSCVAG00000006016)	ENSCVAG00000006019	ENSCVAG00000006027	ENSCVAG00000006032	mmp14b (ENSCVAG00000006040) #22	ENSCVAG00000006054 #34	ENSCVAG00000006064	si:ch211-14a17.11 (ENSCVAG00000006071) #35	dhrs1 (ENSCVAG00000006098)	homeza (ENSCVAG00000006104)	ENSCVAG00000006120	zp3f.2 (ENSCVAG00000006253)	nedd8l (ENSCVAG00000006267)	ap1g2 (ENSCVAG00000006281)	prmt5 (ENSCVAG00000006325) #25	psmb5 (ENSCVAG00000006339) #29	ENSCVAG00000006357 #31	carmil3 (ENSCVAG00000006424)	ENSCVAG00000006431	rem2 (ENSCVAG00000006437) #24
Mummichog	MODERN SPECIES	2251	plcd1b (ENSFHEG00000018171)	ctdsplb (ENSFHEG00000018093)	hhatla (ENSFHEG00000018067)	klhl40a (ENSFHEG00000017994)	ENSFHEG00000017979	ENSFHEG00000017766	eif2b5 (ENSFHEG00000017754)	selenoj (ENSFHEG00000017709)	casq1a (ENSFHEG00000017681)	ENSFHEG00000017644	ENSFHEG00000017635	ENSFHEG00000017596	cbln12 (ENSFHEG00000017561)	ENSFHEG00000017556	ENSFHEG00000017550	mmp14b (ENSFHEG00000017542) #22	ENSFHEG00000017491 #34	ENSFHEG00000017486	si:ch211-14a17.11 (ENSFHEG00000017465) #35	ENSFHEG00000017476	dhrs1 (ENSFHEG00000017448)	homeza (ENSFHEG00000017413)	zp3f.1 (ENSFHEG00000017408)	zp3f.2 (ENSFHEG00000017401)	ap1g2 (ENSFHEG00000017386)	nedd8l (ENSFHEG00000017291)	prmt5 (ENSFHEG00000017278) #25	PSMB11 (ENSFHEG00000017177) #30	psmb5 (ENSFHEG00000016895) #29	ENSFHEG00000016888 #31
Poeciliinae	ANCESTRAL SPECIES	6	ENSGT01040000240451.a.b.b.a.a	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT01060000249153	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT00390000007438 #35	ENSGT01040000240385.C	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31	ENSGT00940000157990.a.a.f
Poecilia	ANCESTRAL SPECIES	19	ENSGT00940000158392.e.a	ENSGT01040000240451.a.b.b.a.a	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT01060000249153	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT00390000007438 #35	ENSGT01040000240385.C	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31	ENSGT00940000157990.a.a.f
NAME_6	ANCESTRAL SPECIES	89	ENSGT01040000240451.a.b.b.a.a	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT01060000249153.a	ENSGT01060000249153.b	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT00390000007438 #35	ENSGT01040000240385.C	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29
Amazon molly	MODERN SPECIES	301	hhatla (ENSPFOG00000015895)	klhl40a (ENSPFOG00000015929)	ENSPFOG00000015954	ENSPFOG00000024733	eif2b5 (ENSPFOG00000016049)	selenoj (ENSPFOG00000016084)	casq1a (ENSPFOG00000016307)	ENSPFOG00000016168	selenoj (ENSPFOG00000016284)	ENSPFOG00000016328	ENSPFOG00000016347	chd8 (ENSPFOG00000016369)	cbln12 (ENSPFOG00000016472)	ENSPFOG00000016479	ENSPFOG00000016504	mmp14b (ENSPFOG00000016510) #22	ENSPFOG00000016546 #34	si:ch211-14a17.11 (ENSPFOG00000016600) #35	ENSPFOG00000021680	dhrs1 (ENSPFOG00000016608)	homeza (ENSPFOG00000020911)	ENSPFOG00000016632	zp3f.1 (ENSPFOG00000016636)	zp3f.2 (ENSPFOG00000016657)	nedd8l (ENSPFOG00000016661)	ap1g2 (ENSPFOG00000016697)	prmt5 (ENSPFOG00000016877) #25	PSMB11 (ENSPFOG00000016979) #30	psmb5 (ENSPFOG00000016982) #29
Sailfin molly	MODERN SPECIES	1795										ENSPLAG00000018545	ENSPLAG00000018536	chd8 (ENSPLAG00000018522)	cbln12 (ENSPLAG00000018359)	ENSPLAG00000018335	ENSPLAG00000018320	mmp14b (ENSPLAG00000018310) #22	ENSPLAG00000018260 #34	ENSPLAG00000018253	si:ch211-14a17.11 (ENSPLAG00000018245) #35	dhrs1 (ENSPLAG00000018240)	ENSPLAG00000018233	homeza (ENSPLAG00000018214)	zp3f.1 (ENSPLAG00000018211)	zp3f.2 (ENSPLAG00000018207)	nedd8l (ENSPLAG00000018198)	ap1g2 (ENSPLAG00000018173)	prmt5 (ENSPLAG00000018154) #25	PSMB11 (ENSPLAG00000000415) #30	psmb5 (ENSPLAG00000017943) #29
Guppy	MODERN SPECIES	447	ctdsplb (ENSPREG00000021732)	hhatla (ENSPREG00000021742)	klhl40a (ENSPREG00000021763)	ENSPREG00000021772	ENSPREG00000021783	eif2b5 (ENSPREG00000021790)	selenoj (ENSPREG00000021799)	casq1a (ENSPREG00000021818)	ENSPREG00000021836	ENSPREG00000021845	ENSPREG00000021853	chd8 (ENSPREG00000021867)	cbln12 (ENSPREG00000021889)	ENSPREG00000021903	ENSPREG00000021908	mmp14b (ENSPREG00000021914) #22	ENSPREG00000021930 #34	ENSPREG00000021941 #34	si:ch211-14a17.11 (ENSPREG00000021948) #35	dhrs1 (ENSPREG00000021956)	homeza (ENSPREG00000021965)	zp3f.1 (ENSPREG00000021970)	zp3f.2 (ENSPREG00000021981)	nedd8l (ENSPREG00000022000)	ap1g2 (ENSPREG00000022013)	prmt5 (ENSPREG00000022051) #25	PSMB11 (ENSPREG00000022073) #30	psmb5 (ENSPREG00000022102) #29	ENSPREG00000022111	ENSPREG00000022116	ENSPREG00000022127 #31
Platyfish	MODERN SPECIES	20	ctdsplb (ENSXMAG00000000280)	hhatla (ENSXMAG00000000288)	klhl40a (ENSXMAG00000000293)	ENSXMAG00000000298	ENSXMAG00000000315	eif2b5 (ENSXMAG00000000316)	selenoj (ENSXMAG00000000320)	casq1a (ENSXMAG00000000321)	ENSXMAG00000027201	ENSXMAG00000029994	ENSXMAG00000000362	ENSXMAG00000022461	cbln12 (ENSXMAG00000000868)	ENSXMAG00000021455	ENSXMAG00000000902	mmp14b (ENSXMAG00000000903) #22	ENSXMAG00000000377	si:ch211-14a17.11 (ENSXMAG00000000401) #35	ENSXMAG00000025510	homeza (ENSXMAG00000027029)	ENSXMAG00000027859	zp3f.1 (ENSXMAG00000000403)	zp3f.2 (ENSXMAG00000000411)	nedd8l (ENSXMAG00000000467)	ap1g2 (ENSXMAG00000000415)	prmt5 (ENSXMAG00000000469) #25	PSMB11 (ENSXMAG00000000491) #30	psmb5 (ENSXMAG00000000493) #29	ENSXMAG00000027495	ENSXMAG00000025427 #31	carmil3 (ENSXMAG00000006023)
Oryzias	ANCESTRAL SPECIES	12	ENSGT01040000240451.a.b.b.a.a	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT01040000240894	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT00390000007438 #35	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31	ENSGT00940000157990.a.a	ENSGT00980000198654
Oryzias_b	ANCESTRAL SPECIES	8	ENSGT01040000240451.a.b.b.a.a	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT01040000240894	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT00390000007438 #35	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00390000001141 #25	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31	ENSGT00940000157990.a.a	ENSGT00980000198654	ENSGT00940000160062.a #24	ENSGT00390000004964
Indian medaka	MODERN SPECIES	10	ctdsplb (ENSOMEG00000012204)	hhatla (ENSOMEG00000012297)	klhl40a (ENSOMEG00000012349)	ENSOMEG00000012443	ENSOMEG00000012475	eif2b5 (ENSOMEG00000012506)	selenoj (ENSOMEG00000012535)	casq1a (ENSOMEG00000012578)	ENSOMEG00000012615	ENSOMEG00000012639	ENSOMEG00000012678	chd8 (ENSOMEG00000012832)	cbln12 (ENSOMEG00000012864)	ENSOMEG00000012884	ENSOMEG00000012904	mmp14b (ENSOMEG00000012965) #22	ENSOMEG00000013014 #34	si:ch211-14a17.11 (ENSOMEG00000013029) #35	dhrs1 (ENSOMEG00000013046)	homeza (ENSOMEG00000013056)	zp3f.2 (ENSOMEG00000013095)	nedd8l (ENSOMEG00000013114)	ap1g2 (ENSOMEG00000013184)	prmt5 (ENSOMEG00000013235) #25	PSMB11 (ENSOMEG00000013392) #30	psmb5 (ENSOMEG00000013456) #29	ENSOMEG00000013488 #31	ENSOMEG00000013510	carmil3 (ENSOMEG00000013557)	ENSOMEG00000013587	rem2 (ENSOMEG00000013598) #24
Javanese ricefish	MODERN SPECIES	8	hhatla (ENSOJAG00000004707)	klhl40a (ENSOJAG00000004930)	psmd5 (ENSOJAG00000004949)	ENSOJAG00000005042	ENSOJAG00000005542	ENSOJAG00000005527	eif2b5 (ENSOJAG00000005558)	selenoj (ENSOJAG00000005609)	casq1a (ENSOJAG00000005659)	ENSOJAG00000006082	ENSOJAG00000006092	ENSOJAG00000006103	cbln12 (ENSOJAG00000008558)	ENSOJAG00000008616	ENSOJAG00000008630	mmp14b (ENSOJAG00000008770) #22	ENSOJAG00000009703 #34	si:ch211-14a17.11 (ENSOJAG00000009718) #35	dhrs1 (ENSOJAG00000009737)	homeza (ENSOJAG00000009745)	ENSOJAG00000009754	zp3f.2 (ENSOJAG00000009883)	nedd8l (ENSOJAG00000009946)	ap1g2 (ENSOJAG00000010068)	psmb5 (ENSOJAG00000011146) #29	ENSOJAG00000011202 #31	carmil3 (ENSOJAG00000011411)	rem2 (ENSOJAG00000011612) #24	ENSOJAG00000011636	abhd4 (ENSOJAG00000011882) #17	dad1 (ENSOJAG00000011908) #16
Oryzias_a	ANCESTRAL SPECIES	7	ENSGT01040000240451.a.b.b.a.a	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT01040000240894	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT00390000007438 #35	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31	ENSGT00940000157990.a.a	ENSGT00980000198654
Japanese Medaka HdrR	MODERN SPECIES	8	plcd1b (ENSORLG00000011876)	ctdsplb (ENSORLG00000011888)	hhatla (ENSORLG00000011907)	klhl40a (ENSORLG00000011926)	ENSORLG00000011942	ENSORLG00000011950	eif2b5 (ENSORLG00000011987)	casq1a (ENSORLG00000012045)	ENSORLG00000024307	ENSORLG00000012054	ENSORLG00000012065	chd8 (ENSORLG00000012103)	cbln12 (ENSORLG00000012116)	ENSORLG00000012133	ENSORLG00000026871	mmp14b (ENSORLG00000012159) #22	ENSORLG00000012188 #34	si:ch211-14a17.11 (ENSORLG00000022949) #35	dhrs1 (ENSORLG00000028592)	homeza (ENSORLG00000012220)	ENSORLG00000012225	zp3f.1 (ENSORLG00000012249)	zp3f.2 (ENSORLG00000012273)	ap1g2 (ENSORLG00000012317)	ENSORLG00000027923	prmt5 (ENSORLG00000012353) #25	ENSORLG00000022851 #30	psmb5 (ENSORLG00000026171) #29	ENSORLG00000012385 #31	carmil3 (ENSORLG00000012421)	ENSORLG00000023282
Chinese medaka	MODERN SPECIES	442	ctdsplb (ENSOSIG00000009004)	hhatla (ENSOSIG00000009003)	klhl40a (ENSOSIG00000009002)	ENSOSIG00000006678	ENSOSIG00000006664	eif2b5 (ENSOSIG00000006312)	selenoj (ENSOSIG00000006310)	casq1a (ENSOSIG00000004765)	ENSOSIG00000004730	ENSOSIG00000004727	ENSOSIG00000004722	chd8 (ENSOSIG00000004573)	cbln12 (ENSOSIG00000004568)	ENSOSIG00000004564	ENSOSIG00000004562	mmp14b (ENSOSIG00000003768) #22	ENSOSIG00000003706 #34	si:ch211-14a17.11 (ENSOSIG00000013461) #35	dhrs1 (ENSOSIG00000013384)	homeza (ENSOSIG00000013380)	ENSOSIG00000013378	zp3f.2 (ENSOSIG00000013376)	nedd8l (ENSOSIG00000013373)	ap1g2 (ENSOSIG00000013345)	prmt5 (ENSOSIG00000013241) #25	PSMB11 (ENSOSIG00000013140) #30	psmb5 (ENSOSIG00000013136) #29	CDH24 (ENSOSIG00000013132) #31	carmil3 (ENSOSIG00000013131)	rem2 (ENSOSIG00000013129) #24	ENSOSIG00000013127
Ovalentaria_B	ANCESTRAL SPECIES	6	ENSGT01040000240451.a.b.b.a.a	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00940000167524	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT01030000235234.a	ENSGT00390000007438 #35	ENSGT01040000240385.B.d	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29
Pomacentridae	ANCESTRAL SPECIES	6	ENSGT01040000240451.a.b.b.a.a	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00940000167524	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT00390000007438 #35	ENSGT01040000240385.B.d	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31
Pomacentridae_A	ANCESTRAL SPECIES	80	ENSGT01040000240451.a.b.b.a.a	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00940000167524	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT00390000007438 #35	ENSGT01040000240385.B.d	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31
Amphiprion	ANCESTRAL SPECIES	95	ENSGT01040000240451.a.b.b.a.a	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00940000167524	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT00390000007438 #35	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00940000158278.e.b #37	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31	ENSGT00940000157990.a.a
Orange clownfish	MODERN SPECIES	1	ctdsplb (ENSAPEG00000020877)	hhatla (ENSAPEG00000020828)	klhl40a (ENSAPEG00000020802)	ENSAPEG00000020649	ENSAPEG00000020638	eif2b5 (ENSAPEG00000020580)	selenoj (ENSAPEG00000020498)	casq1a (ENSAPEG00000020459)	ENSAPEG00000020448	ENSAPEG00000020435	ENSAPEG00000020386	ENSAPEG00000020343	cbln12 (ENSAPEG00000020241)	ENSAPEG00000020221	ENSAPEG00000020215	mmp14b (ENSAPEG00000020162) #22	ENSAPEG00000020100 #34	si:ch211-14a17.11 (ENSAPEG00000020073) #35	dhrs1 (ENSAPEG00000020044)	homeza (ENSAPEG00000020036)	ENSAPEG00000020012	zp3f.2 (ENSAPEG00000019965)	zp3f.1 (ENSAPEG00000019923)	nedd8l (ENSAPEG00000019896)	ap1g2 (ENSAPEG00000019801)	ENSAPEG00000019771 #37	prmt5 (ENSAPEG00000019711) #25	PSMB11 (ENSAPEG00000019690) #30	psmb5 (ENSAPEG00000019669) #29	ENSAPEG00000019520 #31	carmil3 (ENSAPEG00000019429)
Clown anemonefish	MODERN SPECIES	1680	plcd1b (ENSAOCG00000002033)	ctdsplb (ENSAOCG00000017547)	hhatla (ENSAOCG00000017489)	klhl40a (ENSAOCG00000017410)	ENSAOCG00000017360	ENSAOCG00000017157	eif2b5 (ENSAOCG00000017129)	selenoj (ENSAOCG00000017037)	casq1a (ENSAOCG00000016902)	ENSAOCG00000016845	ENSAOCG00000016831	ENSAOCG00000016816	chd8 (ENSAOCG00000016793)	cbln12 (ENSAOCG00000016593)	ENSAOCG00000016559	mmp14b (ENSAOCG00000016552) #22	ENSAOCG00000016504 #34	si:ch211-14a17.11 (ENSAOCG00000016491) #35
Spiny chromis	MODERN SPECIES	283			hhatla (ENSAPOG00000016093)	klhl40a (ENSAPOG00000016031)	ENSAPOG00000016021	ENSAPOG00000000447	eif2b5 (ENSAPOG00000001134)	selenoj (ENSAPOG00000015862)	casq1a (ENSAPOG00000015718)	ENSAPOG00000015651	ENSAPOG00000015633	ENSAPOG00000015607	chd8 (ENSAPOG00000015560)	cbln12 (ENSAPOG00000015360)	ENSAPOG00000015347	mmp14b (ENSAPOG00000015341) #22	ENSAPOG00000015331 #34	si:ch211-14a17.11 (ENSAPOG00000015319) #35	ENSAPOG00000015298	dhrs1 (ENSAPOG00000015267)	homeza (ENSAPOG00000015230)	ENSAPOG00000015222	zp3f.1 (ENSAPOG00000015196)	zp3f.2 (ENSAPOG00000015151)	nedd8l (ENSAPOG00000015112)	ap1g2 (ENSAPOG00000015086)	ENSAPOG00000015035 #37	prmt5 (ENSAPOG00000014972) #25	PSMB11 (ENSAPOG00000014877) #30	psmb5 (ENSAPOG00000014613) #29	ENSAPOG00000014579 #31
Bicolor damselfish	MODERN SPECIES	661	plcd1b (ENSSPAG00000022821)	ctdsplb (ENSSPAG00000022843)	hhatla (ENSSPAG00000022860)	klhl40a (ENSSPAG00000022872)	ENSSPAG00000022875	ENSSPAG00000022915	eif2b5 (ENSSPAG00000022919)	selenoj (ENSSPAG00000022926)	casq1a (ENSSPAG00000022936)	ENSSPAG00000022940	ENSSPAG00000022942	ENSSPAG00000022945	chd8 (ENSSPAG00000022956)	cbln12 (ENSSPAG00000022980)	ENSSPAG00000023009	mmp14b (ENSSPAG00000023013) #22	ENSSPAG00000023019 #34	si:ch211-14a17.11 (ENSSPAG00000023029) #35	dhrs1 (ENSSPAG00000023032)	homeza (ENSSPAG00000023040)	ENSSPAG00000023041	zp3f.1 (ENSSPAG00000023047)	zp3f.2 (ENSSPAG00000023057)	ENSSPAG00000023097	ap1g2 (ENSSPAG00000023102)	ENSSPAG00000023116 #37
Cichlidae	ANCESTRAL SPECIES	2	ENSGT01040000240451.a.b.b.a.a	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00960000187060	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT01030000235234.a	ENSGT00390000007438 #35	ENSGT01040000240385.B.d	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00950000182838.B.a.b	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31
Midas cichlid	MODERN SPECIES	567	oxsr1a (ENSACIG00000007576)	plcd1b (ENSACIG00000007323)	ctdsplb (ENSACIG00000007298)	hhatla (ENSACIG00000007266)	klhl40a (ENSACIG00000007177)	ENSACIG00000006933	ENSACIG00000006886	eif2b5 (ENSACIG00000006830)	selenoj (ENSACIG00000006804)	casq1a (ENSACIG00000006774)	ENSACIG00000006763	ENSACIG00000006682	chd8 (ENSACIG00000006440)	ENSACIG00000006397	ENSACIG00000006377	mmp14b (ENSACIG00000006345) #22	ENSACIG00000006332	ENSACIG00000006218 #34	si:ch211-14a17.11 (ENSACIG00000006199) #35	dhrs1 (ENSACIG00000006143)	homeza (ENSACIG00000006128)	zp3f.1 (ENSACIG00000006100)	zp3f.2 (ENSACIG00000006039)	nedd8l (ENSACIG00000006026)	ap1g2 (ENSACIG00000005658)	prmt5 (ENSACIG00000005601) #25
Pseudocrenilabrinae	ANCESTRAL SPECIES	7	ENSGT01040000240451.a.b.b.a.a	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00960000187060	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT01030000235234.a	ENSGT00390000007438 #35	ENSGT01040000240385.B.d	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000155856.bb	ENSGT00940000165806	ENSGT00950000182838.B.a.b	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29
Nile tilapia	MODERN SPECIES	9	ctdsplb (ENSONIG00000015609)	hhatla (ENSONIG00000015604)	klhl40a (ENSONIG00000015600)	ENSONIG00000034074	ENSONIG00000034683	eif2b5 (ENSONIG00000015592)	selenoj (ENSONIG00000015590)	casq1a (ENSONIG00000015581)	ENSONIG00000030654	ENSONIG00000015577	ENSONIG00000015576	chd8 (ENSONIG00000015569)	cbln12 (ENSONIG00000034012)	ENSONIG00000015565	ENSONIG00000033381	mmp14b (ENSONIG00000015561) #22	si:ch211-14a17.11 (ENSONIG00000038592) #35	ENSONIG00000031329	dhrs1 (ENSONIG00000015549)	homeza (ENSONIG00000028704)	ENSONIG00000015547	zp3f.1 (ENSONIG00000015544)	zp3f.2 (ENSONIG00000015542)	nedd8l (ENSONIG00000035401)	ap1g2 (ENSONIG00000015540)	prmt5 (ENSONIG00000015538) #25	PSMB11 (ENSONIG00000003130) #30	psmb5 (ENSONIG00000015536) #29	ENSONIG00000015521 #31	carmil3 (ENSONIG00000009088)	rem2 (ENSONIG00000036246) #24
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	4	ENSGT01040000240451.a.b.b.a.a	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00960000187060	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT01030000235234.a	ENSGT00390000007438 #35	ENSGT01040000240385.B.d	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000165806	ENSGT00950000182838.B.a.b	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31
Haplochromini	ANCESTRAL SPECIES	2	ENSGT01040000240451.a.b.b.a.a	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00960000187060	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT01030000235234.a	ENSGT00390000007438 #35	ENSGT01040000240385.B.d.a	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000165806	ENSGT00950000182838.B.a.b	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31
Burton s mouthbrooder	MODERN SPECIES	429	ctdsplb (ENSHBUG00000023363)	hhatla (ENSHBUG00000023449)	klhl40a (ENSHBUG00000023487)	ENSHBUG00000000795	ENSHBUG00000023511	eif2b5 (ENSHBUG00000023533)	selenoj (ENSHBUG00000023705)	casq1a (ENSHBUG00000023764)	ENSHBUG00000001181	ENSHBUG00000023780	ENSHBUG00000023786	chd8 (ENSHBUG00000002850)	cbln12 (ENSHBUG00000002867)	ENSHBUG00000002876	ENSHBUG00000002882	mmp14b (ENSHBUG00000002951) #22	ENSHBUG00000002970 #34	ENSHBUG00000002980	si:ch211-14a17.11 (ENSHBUG00000002988) #35	dhrs1 (ENSHBUG00000002997)	homeza (ENSHBUG00000003001)	ENSHBUG00000003018	zp3f.1 (ENSHBUG00000003059)	zp3f.2 (ENSHBUG00000003104)	ENSHBUG00000003113	ap1g2 (ENSHBUG00000003123)	prmt5 (ENSHBUG00000003185) #25	PSMB11 (ENSHBUG00000003403) #30	psmb5 (ENSHBUG00000003438) #29	CDH24 (ENSHBUG00000003454) #31	carmil3 (ENSHBUG00000003522)
Haplochromini_A	ANCESTRAL SPECIES	48	ENSGT00940000158392.e.a	ENSGT01040000240451.a.b.b.a.a	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00960000187060	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT01030000235234.a	ENSGT00390000007438 #35	ENSGT01040000240385.B.d.a	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00740000115581.e	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000165806	ENSGT00950000182838.B.a.b	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31
P. nyererei	MODERN SPECIES	393	oxsr1a (ENSPNYG00000017485)	plcd1b (ENSPNYG00000017564)	ctdsplb (ENSPNYG00000017597)	hhatla (ENSPNYG00000017624)	klhl40a (ENSPNYG00000017667)	ENSPNYG00000017713	ENSPNYG00000017753	eif2b5 (ENSPNYG00000017764)	selenoj (ENSPNYG00000017824)	casq1a (ENSPNYG00000017862)	ENSPNYG00000017888	ENSPNYG00000017912	ENSPNYG00000017933	chd8 (ENSPNYG00000018020)	cbln12 (ENSPNYG00000018153)	mmp14b (ENSPNYG00000018181) #22	ENSPNYG00000018220 #34	ENSPNYG00000018234	si:ch211-14a17.11 (ENSPNYG00000018275) #35	ENSPNYG00000018255	dhrs1 (ENSPNYG00000018286)	homeza (ENSPNYG00000018313)	ENSPNYG00000018324	zp3f.1 (ENSPNYG00000018361)	zp3f.2 (ENSPNYG00000018379)	ENSPNYG00000018424	ap1g2 (ENSPNYG00000018686)	prmt5 (ENSPNYG00000019059) #25	PSMB11 (ENSPNYG00000019144) #30	psmb5 (ENSPNYG00000019288) #29	CDH24 (ENSPNYG00000019326) #31
Haplochromini_B	ANCESTRAL SPECIES	52	ENSGT00940000158392.e.a	ENSGT01040000240451.a.b.b.a.a	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630	ENSGT00960000187060	ENSGT00510000047568	ENSGT00400000023530.a	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00940000164991.a.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT00390000007438 #35	ENSGT01040000240385.B.d.a	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b	ENSGT00980000199831	ENSGT01030000234567.A.b.c	ENSGT01030000234567.A.b.d	ENSGT00940000165806	ENSGT00950000182838.B.a.b	ENSGT00390000001141 #25	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a #31	ENSGT00940000157990.a.a
Eastern happy	MODERN SPECIES	9	plcd1b (ENSACLG00000019053)	ctdsplb (ENSACLG00000019144)	hhatla (ENSACLG00000019217)	klhl40a (ENSACLG00000019345)	ENSACLG00000019358	ENSACLG00000019442	eif2b5 (ENSACLG00000019387)	selenoj (ENSACLG00000019471)	casq1a (ENSACLG00000019591)	ENSACLG00000019628	ENSACLG00000019644	ENSACLG00000019657	chd8 (ENSACLG00000019692)	cbln12 (ENSACLG00000019854)	ENSACLG00000019867	mmp14b (ENSACLG00000019878) #22	ENSACLG00000019938 #34	si:ch211-14a17.11 (ENSACLG00000019977) #35	dhrs1 (ENSACLG00000019986)	homeza (ENSACLG00000020035)	zp3f.1 (ENSACLG00000020039)	zp3f.2 (ENSACLG00000020065)	ENSACLG00000020133	ap1g2 (ENSACLG00000020142)	prmt5 (ENSACLG00000020188) #25	PSMB11 (ENSACLG00000020225) #30	psmb5 (ENSACLG00000020616) #29	ENSACLG00000020661 #31	carmil3 (ENSACLG00000020697)	ENSACLG00000021135	rem2 (ENSACLG00000021141) #24
Zebra mbuna	MODERN SPECIES	1100	ctdsplb (ENSMZEG00005011745)	hhatla (ENSMZEG00005011780)	klhl40a (ENSMZEG00005011799)	ENSMZEG00005011820	ENSMZEG00005011952	eif2b5 (ENSMZEG00005011930)	selenoj (ENSMZEG00005011962)	casq1a (ENSMZEG00005011971)	ENSMZEG00005011986	ENSMZEG00005011994	ENSMZEG00005012004	chd8 (ENSMZEG00005012027)	cbln12 (ENSMZEG00005012090)	ENSMZEG00005012097	ENSMZEG00005012103	mmp14b (ENSMZEG00005012114) #22	ENSMZEG00005012139 #34	si:ch211-14a17.11 (ENSMZEG00005012156) #35	ENSMZEG00005012163	dhrs1 (ENSMZEG00005012170)	homeza (ENSMZEG00005012188)	ENSMZEG00005012192	zp3f.1 (ENSMZEG00005012205)	zp3f.2 (ENSMZEG00005012222)	ap1g2 (ENSMZEG00005012243)	ENSMZEG00005012296	prmt5 (ENSMZEG00005012334) #25	PSMB11 (ENSMZEG00005012375) #30	psmb5 (ENSMZEG00005013801) #29	ENSMZEG00005013947	ENSMZEG00005013953 #31
Lyretail cichlid	MODERN SPECIES	385	plcd1b (ENSNBRG00000016846)	ctdsplb (ENSNBRG00000017120)	hhatla (ENSNBRG00000017170)	klhl40a (ENSNBRG00000017212)	ENSNBRG00000017263	ENSNBRG00000017291	eif2b5 (ENSNBRG00000017303)	selenoj (ENSNBRG00000017343)	casq1a (ENSNBRG00000017364)	ENSNBRG00000017383	ENSNBRG00000017389	ENSNBRG00000017397	chd8 (ENSNBRG00000017428)	cbln12 (ENSNBRG00000017547)	ENSNBRG00000017645	mmp14b (ENSNBRG00000017677) #22	ENSNBRG00000017740 #34	si:ch211-14a17.11 (ENSNBRG00000017836) #35	dhrs1 (ENSNBRG00000017852)	homeza (ENSNBRG00000017880)	zp3f.1 (ENSNBRG00000017898)	zp3f.2 (ENSNBRG00000017947)	nedd8l (ENSNBRG00000017992)	ap1g2 (ENSNBRG00000018015)	prmt5 (ENSNBRG00000018087) #25	PSMB11 (ENSNBRG00000018149) #30	psmb5 (ENSNBRG00000018286) #29	CDH24 (ENSNBRG00000018340) #31	carmil3 (ENSNBRG00000018587)	rem2 (ENSNBRG00000018667) #24	ENSNBRG00000018695
Pinecone sodierfish	MODERN SPECIES	8	ENSMMDG00005023957	ENSMMDG00005023960	APCDD1 (ENSMMDG00005023963)	vapal (ENSMMDG00005023964)	ENSMMDG00005023965	RAB31 (ENSMMDG00005023967)	ralbp1 (ENSMMDG00005023971)	twsg1a (ENSMMDG00005023976)	ankrd12 (ENSMMDG00005023985)	ndufv2 (ENSMMDG00005024136)	acss2l (ENSMMDG00005024138)	chd8 (ENSMMDG00005024149)	cbln12 (ENSMMDG00005024223)	ENSMMDG00005024224	ENSMMDG00005024226	mmp14b (ENSMMDG00005024236) #22	ENSMMDG00005024252 #34	si:ch211-14a17.11 (ENSMMDG00005024253) #35	ENSMMDG00005024254	ENSMMDG00005024255	ENSMMDG00005024256	dhrs1 (ENSMMDG00005024258)	homeza (ENSMMDG00005024259)	ENSMMDG00005024260	zp3f.1 (ENSMMDG00005024263)	zp3f.2 (ENSMMDG00005024267)	nedd8l (ENSMMDG00005024269)	ap1g2 (ENSMMDG00005024276)	ENSMMDG00005024318 #37	prmt5 (ENSMMDG00005024408) #25	PSMB11 (ENSMMDG00005024426) #30
Cod	MODERN SPECIES	21	hhatla (ENSGMOG00000002153)	klhl40a (ENSGMOG00000032161)	ENSGMOG00000002209	ENSGMOG00000035218	ENSGMOG00000015305	ENSGMOG00000015337	ENSGMOG00000015264	casq1a (ENSGMOG00000015204)	ENSGMOG00000034494	ENSGMOG00000015192	ENSGMOG00000015161	chd8 (ENSGMOG00000015075)	cbln12 (ENSGMOG00000027463)	ENSGMOG00000015049	ENSGMOG00000034633	mmp14b (ENSGMOG00000015003) #22	ENSGMOG00000025886 #34	si:ch211-14a17.11 (ENSGMOG00000014857) #35	dhrs1 (ENSGMOG00000014739)	homeza (ENSGMOG00000032787)	ENSGMOG00000022761	MPLKIP (ENSGMOG00000025037)	ENSGMOG00000026769	ENSGMOG00000010219	ENSGMOG00000002171	ENSGMOG00000002258	ENSGMOG00000030662	ENSGMOG00000016250	ENSGMOG00000016230	DARS2 (ENSGMOG00000016195)	ENSGMOG00000009614
Protacanthopterygii	ANCESTRAL SPECIES	14	ENSGT00940000166346	ENSGT01030000234599.a.b.d.b.a.a	ENSGT01030000234599.a.b.d.a.b.b	ENSGT00940000156907.p.b.a	ENSGT00950000182900.D	ENSGT00390000019377.a.a.a	ENSGT01100000263533.b.b.b.a.b.a.a.c.b	ENSGT00940000165001.a.a	ENSGT00940000154888.a	ENSGT00940000153649.B	ENSGT00530000064692.A	ENSGT00940000164991.a.b	ENSGT00940000165001.a.b	ENSGT00940000164014.b	ENSGT00940000155384.b.a	ENSGT00940000157808.g #22	ENSGT00710000106790.x #34	ENSGT00390000007438 #35	ENSGT01040000240385.C
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	72	ENSGT00940000166346.d	ENSGT01030000234599.a.b.d.b.a.a.d	ENSGT01030000234599.a.b.d.a.b.b	ENSGT00940000156907.p.b.a.a	ENSGT00950000182900.D.g	ENSGT00990000211065	ENSGT00390000019377.a.a.a.g	ENSGT00950000182774.b.b.b	ENSGT00940000165001.a.a	ENSGT00940000154888.a.d	ENSGT00940000153649.B.e	ENSGT00530000064692.A.c	ENSGT00940000164991.a.b.b	ENSGT00940000165001.a.b.t.b	ENSGT00940000155384.b.a.a	ENSGT00940000157808.g.e #22	ENSGT00710000106790.x.k #34	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b.c	ENSGT01030000234567.A.b.c	ENSGT00940000165806.j.a	ENSGT00950000182838.B.a.b.o	ENSGT00390000001141.c #25	ENSGT00940000162200.a.b.e #30	ENSGT00940000157841.e.b #29	ENSGT00940000159567.a.a.c #31	ENSGT00940000157990.a.a.c	ENSGT01100000263518.C	ENSGT00940000160062.a.c #24	ENSGT00390000004964	ENSGT01050000244939.a.a.b.a.a.d
Salmoninae_a	ANCESTRAL SPECIES	6	ENSGT01030000234599.a.b.d.b.a.a.d	ENSGT01030000234599.a.b.d.a.b.b	ENSGT00940000156907.p.b.a.a	ENSGT00950000182900.D.g	ENSGT00990000211065	ENSGT00390000019377.a.a.a.g	ENSGT00940000172304	ENSGT00940000165001.a.a	ENSGT00940000154888.a.d	ENSGT00390000012563.d	ENSGT00940000153649.B.e	ENSGT00530000064692.A.c	ENSGT00940000164991.a.b.b	ENSGT00940000165001.a.b.t.b	ENSGT00940000155384.b.a.a	ENSGT00940000157808.g.e #22	ENSGT00710000106790.x.k #34	ENSGT01000000219181	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b.c	ENSGT01030000234567.A.b.c	ENSGT00940000165806.j.a	ENSGT00950000182838.B.a.b.o	ENSGT00390000001141.c #25	ENSGT00940000162200.a.b.e #30	ENSGT00940000157841.e.b #29	ENSGT00940000159567.a.a.c #31	ENSGT00940000157990.a.a.c	ENSGT01100000263518.C	ENSGT00940000160062.a.c #24	ENSGT00390000004964
Oncorhynchus	ANCESTRAL SPECIES	15	ENSGT00940000166346.d	ENSGT01030000234599.a.b.d.b.a.a.d	ENSGT01030000234599.a.b.d.a.b.b	ENSGT00940000156907.p.b.a.a	ENSGT00950000182900.D.g	ENSGT00390000019377.a.a.a.g	ENSGT00940000172304	ENSGT00940000165001.a.a	ENSGT00940000154888.a.d	ENSGT00390000012563.d	ENSGT00940000153649.B.e	ENSGT00530000064692.A.c	ENSGT00940000164991.a.b.b	ENSGT00940000165001.a.b.t.b	ENSGT00940000155384.b.a.a	ENSGT00940000157808.g.e #22	ENSGT00710000106790.x.k #34	ENSGT01000000219181	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b.c	ENSGT01030000234567.A.b.c	ENSGT00940000165806.j.a	ENSGT00950000182838.B.a.b.o	ENSGT00390000001141.c #25	ENSGT00940000162200.a.b.e #30	ENSGT00940000157841.e.b #29	ENSGT00940000159567.a.a.c #31	ENSGT00940000157990.a.a.c	ENSGT01100000263518.C	ENSGT00940000160062.a.c #24	ENSGT00390000004964
Rainbow trout	MODERN SPECIES	20	ENSOMYG00000044350	ENSOMYG00000044324	ENSOMYG00000044304	ENSOMYG00000044282	ENSOMYG00000048504	casq1a (ENSOMYG00000044046)	si:rp71-1g18.1 (ENSOMYG00000052196)	ENSOMYG00000043992	ENSOMYG00000043981	ENSOMYG00000070191	chd8 (ENSOMYG00000042672)	ENSOMYG00000069563	ENSOMYG00000042487	cbln12 (ENSOMYG00000042484)	ENSOMYG00000042477	mmp14b (ENSOMYG00000042457) #22	ENSOMYG00000076672	ENSOMYG00000042433 #34	ENSOMYG00000075451	dhrs1 (ENSOMYG00000042410)	homeza (ENSOMYG00000042404)	nedd8l (ENSOMYG00000042393)	ENSOMYG00000042295	prmt5 (ENSOMYG00000042146) #25	ENSOMYG00000042080 #30	psmb5 (ENSOMYG00000042074) #29	ENSOMYG00000051538	ENSOMYG00000042048 #31	ENSOMYG00000053727	carmil3 (ENSOMYG00000042024)	rem2 (ENSOMYG00000042012) #24
Oncorhynchus_a	ANCESTRAL SPECIES	22	ENSGT00940000166346.d	ENSGT01030000234599.a.b.d.b.a.a.d	ENSGT01030000234599.a.b.d.a.b.b	ENSGT00940000156907.p.b.a.a	ENSGT00950000182900.D.g	ENSGT00390000019377.a.a.a.g	ENSGT00940000172304	ENSGT00940000165001.a.a	ENSGT00940000154888.a.d	ENSGT00390000012563.d	ENSGT00940000153649.B.e	ENSGT00530000064692.A.c	ENSGT00940000164991.a.b.b	ENSGT00940000165001.a.b.t.b	ENSGT00940000155384.b.a.a	ENSGT00940000157808.g.e #22	ENSGT00710000106790.x.k #34	ENSGT01000000219181	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b.c	ENSGT01030000234567.A.b.c	ENSGT00940000165806.j.a	ENSGT00950000182838.B.a.b.o	ENSGT00390000001141.c #25	ENSGT00940000162200.a.b.e #30	ENSGT00940000157841.e.b #29	ENSGT00940000159567.a.a.c #31	ENSGT00940000157990.a.a.c	ENSGT01100000263518.C	ENSGT00940000160062.a.c #24	ENSGT00390000004964
Coho salmon	MODERN SPECIES	19	ENSOKIG00005016105	zgc:66427 (ENSOKIG00005016098)	apol1 (ENSOKIG00005016059)	ENSOKIG00005016019	ENSOKIG00005015970	ENSOKIG00005015931	casq1a (ENSOKIG00005015896)	ENSOKIG00005050869	ENSOKIG00005050868	ENSOKIG00005050867	NOP10 (ENSOKIG00005050866)	chd8 (ENSOKIG00005050846)	cbln12 (ENSOKIG00005050842)	ENSOKIG00005050840	ENSOKIG00005050838	mmp14b (ENSOKIG00005050833) #22	ENSOKIG00005050831	ENSOKIG00005050828 #34	dhrs1 (ENSOKIG00005050826)	homeza (ENSOKIG00005050824)	zp3f.1 (ENSOKIG00005050821)	ENSOKIG00005050818	ap1g2 (ENSOKIG00005050810)	prmt5 (ENSOKIG00005050797) #25	PSMB11 (ENSOKIG00005050787) #30	psmb5 (ENSOKIG00005050784) #29	CDH24 (ENSOKIG00005050782) #31	carmil3 (ENSOKIG00005050773)	ENSOKIG00005050767	rem2 (ENSOKIG00005050765) #24	ENSOKIG00005050762
Chinook salmon	MODERN SPECIES	20	ENSOTSG00005012154	ENSOTSG00005012151	ENSOTSG00005012150	casq1a (ENSOTSG00005012125)	si:rp71-1g18.1 (ENSOTSG00005012123)	ENSOTSG00005012122	ENSOTSG00005012121	NOP10 (ENSOTSG00005012119)	chd8 (ENSOTSG00005007245)	ENSOTSG00005007221	cbln12 (ENSOTSG00005007220)	ENSOTSG00005007219	ENSOTSG00005007218	ENSOTSG00005007216	ENSOTSG00005007215 #34	mmp14b (ENSOTSG00005007212) #22	ENSOTSG00005007213	dhrs1 (ENSOTSG00005007210)	homeza (ENSOTSG00005007209)	zp3f.1 (ENSOTSG00005007207)	ENSOTSG00005007206	ap1g2 (ENSOTSG00005047916)	prmt5 (ENSOTSG00005047912) #25	PSMB11 (ENSOTSG00005047911) #30	ENSOTSG00005047910	ENSOTSG00005047909	psmb5 (ENSOTSG00005047908) #29	CDH24 (ENSOTSG00005047907) #31	ENSOTSG00005047905	rem2 (ENSOTSG00005047904) #24	ENSOTSG00005047903
Salmo	ANCESTRAL SPECIES	5	ENSGT01030000234599.a.b.d.b.a.a.d	ENSGT01030000234599.a.b.d.a.b.b	ENSGT00940000156907.p.b.a.a	ENSGT00950000182900.D.g	ENSGT00990000211065	ENSGT00390000019377.a.a.a.g	ENSGT01100000263533.b.b.b.a.b.a.a.c.b.a	ENSGT00940000165001.a.a	ENSGT00940000154888.a.d	ENSGT00390000012563.d	ENSGT00940000153649.B.e	ENSGT00530000064692.A.c	ENSGT00940000164991.a.b.b	ENSGT00940000165001.a.b.t.b	ENSGT00940000155384.b.a.a	ENSGT00940000157808.g.e #22	ENSGT00710000106790.x.k #34	ENSGT01000000219181	ENSGT00940000157797	ENSGT00950000182893.a.b.e.b.c	ENSGT01030000234567.A.b.c	ENSGT00940000165806.j.a	ENSGT00950000182838.B.a.b.o	ENSGT00940000158278.e.b.d #37	ENSGT00390000001141.c #25	ENSGT00940000162200.a.b.e #30	ENSGT00940000157841.e.b #29	ENSGT00940000159567.a.a.c #31	ENSGT00940000157990.a.a.c	ENSGT01100000263518.C	ENSGT00940000160062.a.c #24
River trout	MODERN SPECIES	24	apol1 (ENSSTUG00000013393)	ENSSTUG00000013268	ENSSTUG00000013222	ENSSTUG00000013210	ENSSTUG00000013202	casq1a (ENSSTUG00000013154)	ENSSTUG00000013143	ENSSTUG00000013117	ENSSTUG00000013085	NOP10 (ENSSTUG00000013077)	chd8 (ENSSTUG00000010567)	ENSSTUG00000010494	cbln12 (ENSSTUG00000010488)	ENSSTUG00000010476	ENSSTUG00000010473	mmp14b (ENSSTUG00000010419) #22	ENSSTUG00000010406	ENSSTUG00000010365 #34	dhrs1 (ENSSTUG00000010338)	homeza (ENSSTUG00000010333)	zp3f.1 (ENSSTUG00000010261)	ENSSTUG00000010249	ap1g2 (ENSSTUG00000009504)	prmt5 (ENSSTUG00000008225) #25	ENSSTUG00000008182 #30	psmb5 (ENSSTUG00000008137) #29	ENSSTUG00000008088 #31	carmil3 (ENSSTUG00000008028)	ENSSTUG00000008017	rem2 (ENSSTUG00000008008) #24	ENSSTUG00000007982
Atlantic salmon	MODERN SPECIES	22	ltb4r2b (ENSSSAG00000063942)	ENSSSAG00000063946	ENSSSAG00000063950	ENSSSAG00000063976	ENSSSAG00000064008	ENSSSAG00000064036	ENSSSAG00000064076	casq1a (ENSSSAG00000064083)	ENSSSAG00000064114	ENSSSAG00000064120	ENSSSAG00000064123	chd8 (ENSSSAG00000064186)	ENSSSAG00000067742	ENSSSAG00000067750	ENSSSAG00000067752	mmp14b (ENSSSAG00000067758) #22	ENSSSAG00000120516 #34	ENSSSAG00000086736	ENSSSAG00000120731	dhrs1 (ENSSSAG00000067779)	ENSSSAG00000105028	homeza (ENSSSAG00000067787)	zp3f.1 (ENSSSAG00000067805)	ENSSSAG00000067816	ap1g2 (ENSSSAG00000067945)	ENSSSAG00000071560 #37	prmt5 (ENSSSAG00000071581) #25	ENSSSAG00000071632 #30	ENSSSAG00000064913	ENSSSAG00000071634	psmb5 (ENSSSAG00000071636) #29
Huchen	MODERN SPECIES	708	zgc:66427 (ENSHHUG00000051957)	apol1 (ENSHHUG00000051965)	ENSHHUG00000051982	ENSHHUG00000052001	ENSHHUG00000052007	ENSHHUG00000052018	casq1a (ENSHHUG00000052020)	ENSHHUG00000052033	ENSHHUG00000052035	ENSHHUG00000052039	chd8 (ENSHHUG00000052047)	ENSHHUG00000052085	cbln12 (ENSHHUG00000052086)	ENSHHUG00000052089	ENSHHUG00000052091	mmp14b (ENSHHUG00000052092) #22	ENSHHUG00000052093	ENSHHUG00000052094 #34	dhrs1 (ENSHHUG00000052095)	homeza (ENSHHUG00000052100)	zp3f.1 (ENSHHUG00000052103)	ENSHHUG00000052107	ap1g2 (ENSHHUG00000052123)	ENSHHUG00000052158 #37	prmt5 (ENSHHUG00000052165) #25	PSMB11 (ENSHHUG00000052172) #30	psmb5 (ENSHHUG00000052176) #29	ENSHHUG00000052178
Salmoninae	ANCESTRAL SPECIES	24	ENSGT01050000244890.a.a.b	ENSGT00940000166346.c	ENSGT01030000234599.a.b.d.b.a.a.c	ENSGT00940000156907.p.b.a.b	ENSGT00940000158605.t	ENSGT00950000182900.D.h	ENSGT00390000019377.a.a.a.h	ENSGT01100000263533.b.b.b.a.b.a.a.c.b	ENSGT00940000154888.a.c	ENSGT00940000153649.B.f	ENSGT00530000064692.A.d	ENSGT00940000164991.a.b.a	ENSGT00940000165001.a.b.t.a	ENSGT00940000164014.b	ENSGT00940000155384.b.a.b	ENSGT00940000157808.g.f #22	ENSGT00710000106790.x.l #34	ENSGT00390000007438.`b #35	ENSGT01040000240385.C	ENSGT00950000182893.a.b.e.b.d	ENSGT00740000115581.e	ENSGT01030000234567.A.b.d	ENSGT00940000165806.j.b	ENSGT00950000182838.B.a.b.p	ENSGT00940000158278.e.b #37	ENSGT00390000001141.d #25	ENSGT00940000162200.a.b.f #30	ENSGT00940000157841.e.a #29	ENSGT00940000159567.a.a.d #31	ENSGT00940000157990.a.a.d	ENSGT00940000160062.a.d #24
Salmoninae_a	ANCESTRAL SPECIES	2	ENSGT01050000244890.a.a.b	ENSGT00940000166346.c	ENSGT01030000234599.a.b.d.b.a.a.c	ENSGT00940000156907.p.b.a.b	ENSGT00940000158605.t	ENSGT00950000182900.D.h	ENSGT00390000019377.a.a.a.h	ENSGT01100000263533.b.b.b.a.b.a.a.c.b	ENSGT00940000154888.a.c	ENSGT00940000153649.B.f	ENSGT00530000064692.A.d	ENSGT00940000164991.a.b.a	ENSGT00940000165001.a.b.t.a	ENSGT00940000164014.b	ENSGT00940000155384.b.a.b	ENSGT00940000157808.g.f #22	ENSGT00710000106790.x.l #34	ENSGT00390000007438.`b #35	ENSGT01040000240385.C	ENSGT00950000182893.a.b.e.b.d	ENSGT00740000115581.e	ENSGT01030000234567.A.b.d	ENSGT00940000165806.j.b	ENSGT00950000182838.B.a.b.p	ENSGT00940000158278.e.b #37	ENSGT00390000001141.d #25	ENSGT00940000162200.a.b.f #30	ENSGT00940000157841.e.a #29	ENSGT00940000159567.a.a.d #31	ENSGT00940000157990.a.a.d	ENSGT00940000160062.a.d #24
Salmo	ANCESTRAL SPECIES	21	ENSGT01050000244890.a.a.b	ENSGT00940000166346.c	ENSGT01030000234599.a.b.d.b.a.a.c	ENSGT00940000156907.p.b.a.b	ENSGT00940000158605.t	ENSGT00950000182900.D.h	ENSGT00390000019377.a.a.a.h	ENSGT01100000263533.b.b.b.a.b.a.a.c.b.b	ENSGT00940000154888.a.c	ENSGT00940000153649.B.f	ENSGT00530000064692.A.d	ENSGT00940000164991.a.b.a	ENSGT00940000164014.b	ENSGT00940000165001.a.b.t.a	ENSGT00940000155384.b.a.b	ENSGT00940000157808.g.f #22	ENSGT00710000106790.x.l #34	ENSGT00390000007438.`b #35	ENSGT01040000240385.C	ENSGT00950000182893.a.b.e.b.d	ENSGT00740000115581.e	ENSGT00990000214019	ENSGT01030000234567.A.b.d	ENSGT00940000165806.j.b	ENSGT00950000182838.B.a.b.p	ENSGT00940000158278.e.b.c #37	ENSGT00390000001141.d #25	ENSGT00940000162200.a.b.f #30	ENSGT00940000157841.e.a #29	ENSGT00940000159567.a.a.d #31	ENSGT00940000157990.a.a.d
River trout	MODERN SPECIES	13	zgc:66427 (ENSSTUG00000007531)	apol1 (ENSSTUG00000007540)	zgc:55733 (ENSSTUG00000007571)	ENSSTUG00000007599	ENSSTUG00000007615	ENSSTUG00000007657	casq1a (ENSSTUG00000007681)	ENSSTUG00000007776	ENSSTUG00000007785	ENSSTUG00000007848	ENSSTUG00000008302	cbln12 (ENSSTUG00000008305)	ENSSTUG00000008315	ENSSTUG00000008323	ENSSTUG00000008328	mmp14b (ENSSTUG00000008337) #22	ENSSTUG00000008404 #34	si:ch211-14a17.11 (ENSSTUG00000008426) #35	ENSSTUG00000008466	homeza (ENSSTUG00000008664)	ENSSTUG00000008667	ENSSTUG00000008683	zp3f.2 (ENSSTUG00000008729)	ENSSTUG00000008826	zp3f.2 (ENSSTUG00000008912)	ap1g2 (ENSSTUG00000008949)	ENSSTUG00000009276 #37	prmt5 (ENSSTUG00000009454) #25	psmb5 (ENSSTUG00000009649) #29	CDH24 (ENSSTUG00000009657) #31	carmil3 (ENSSTUG00000009696)
Atlantic salmon	MODERN SPECIES	5	ENSSSAG00000083545	ENSSSAG00000006048	ENSSSAG00000006118	ENSSSAG00000105696	ENSSSAG00000006210	ENSSSAG00000114979	ENSSSAG00000006254	casq1a (ENSSSAG00000006477)	ENSSSAG00000082573	ENSSSAG00000090059	ENSSSAG00000006918	chd8 (ENSSSAG00000007043)	ENSSSAG00000016848	ENSSSAG00000090707	ENSSSAG00000105855	mmp14b (ENSSSAG00000017327) #22	ENSSSAG00000023545 #34	si:ch211-14a17.11 (ENSSSAG00000024251) #35	ENSSSAG00000084735	homez (ENSSSAG00000098522)	ENSSSAG00000114252	ENSSSAG00000024914	zp3f.2 (ENSSSAG00000020693)	zp3f.2 (ENSSSAG00000113336)	zp3f.2 (ENSSSAG00000104954)	NEDD8 (ENSSSAG00000028979)	zp3f.2 (ENSSSAG00000098828)	zp3f.2 (ENSSSAG00000097451)	ap1g2 (ENSSSAG00000032035)	zp3f.2 (ENSSSAG00000022880)	ENSSSAG00000048190 #37
Oncorhynchus	ANCESTRAL SPECIES	11	ENSGT01050000244890.a.a.b	ENSGT00940000166346.c	ENSGT01030000234599.a.b.d.b.a.a.c	ENSGT00940000156907.p.b.a.b	ENSGT00940000158605.t	ENSGT00950000182900.D.h	ENSGT00390000019377.a.a.a.h	ENSGT01100000263533.b.b.b.a.b.a.a.c.b	ENSGT00940000154888.a.c	ENSGT00940000153649.B.f	ENSGT00530000064692.A.d	ENSGT00940000164991.a.b.a	ENSGT00940000165001.a.b.t.a	ENSGT00940000164014.b	ENSGT00940000155384.b.a.b	ENSGT00940000157808.g.f #22	ENSGT00710000106790.x.l #34	ENSGT00390000007438.`b #35	ENSGT00950000182893.a.b.e.b.d	ENSGT00740000115581.e	ENSGT01030000234567.A.b.d.p.a.b	ENSGT00940000165806.j.b	ENSGT00950000182838.B.a.b.p	ENSGT00940000158278.e.b #37	ENSGT00390000001141.d #25	ENSGT00940000162200.a.b.f #30	ENSGT00940000157841.e.a #29	ENSGT00940000159567.a.a.d #31	ENSGT00940000157990.a.a.d	ENSGT00940000160062.a.d #24	ENSGT01050000244939.a.a.b.a.a.c
Rainbow trout	MODERN SPECIES	29	ENSOMYG00000043200	ENSOMYG00000023399	ENSOMYG00000023447	ENSOMYG00000023480	ENSOMYG00000064010	casq1a (ENSOMYG00000023546)	ENSOMYG00000072667	ENSOMYG00000023644	chd8 (ENSOMYG00000023744)	ENSOMYG00000023913	cbln12 (ENSOMYG00000023923)	ENSOMYG00000023951	ENSOMYG00000023970	ENSOMYG00000023981	ENSOMYG00000002633	mmp14b (ENSOMYG00000024040) #22	ENSOMYG00000024202 #34	si:ch211-14a17.11 (ENSOMYG00000024229) #35	ENSOMYG00000070594	homeza (ENSOMYG00000024272)	zp3f.2 (ENSOMYG00000075781)	zp3f.2 (ENSOMYG00000051100)	zp3f.2 (ENSOMYG00000063721)	zp3f.2 (ENSOMYG00000054284)	zp3f.2 (ENSOMYG00000051921)	zp3f.2 (ENSOMYG00000024287)	ENSOMYG00000024315	ap1g2 (ENSOMYG00000024799)	ENSOMYG00000027155 #37	prmt5 (ENSOMYG00000027919) #25	ENSOMYG00000060157
Oncorhynchus_a	ANCESTRAL SPECIES	24	ENSGT01050000244890.a.a.b	ENSGT00940000166346.c	ENSGT01030000234599.a.b.d.b.a.a.c	ENSGT00940000156907.p.b.a.b	ENSGT00940000158605.t	ENSGT00950000182900.D.h	ENSGT00390000019377.a.a.a.h	ENSGT01100000263533.b.b.b.a.b.a.a.c.b	ENSGT00940000154888.a.c	ENSGT00940000153649.B.f	ENSGT00530000064692.A.d	ENSGT00940000164991.a.b.a	ENSGT00940000165001.a.b.t.a	ENSGT00940000164014.b	ENSGT00940000155384.b.a.b	ENSGT00940000157808.g.f #22	ENSGT00710000106790.x.l #34	ENSGT00390000007438.`b #35	ENSGT00950000182893.a.b.e.b.d	ENSGT00740000115581.e	ENSGT01030000234567.A.b.d.o.a.a	ENSGT00940000165806.j.b	ENSGT00950000182838.B.a.b.p	ENSGT00940000158278.e.b #37	ENSGT00390000001141.d #25	ENSGT00940000162200.a.b.f #30	ENSGT00940000157841.e.a #29	ENSGT00940000159567.a.a.d #31	ENSGT00940000157990.a.a.d	ENSGT00940000160062.a.d #24	ENSGT01050000244939.a.a.b.a.a.c
Chinook salmon	MODERN SPECIES	1	ENSOTSG00005037255	zgc:66427 (ENSOTSG00005037257)	apol1 (ENSOTSG00005037258)	zgc:55733 (ENSOTSG00005037263)	ENSOTSG00005037594	ENSOTSG00005037598	ENSOTSG00005037601	TOX4 (ENSOTSG00005037604)	chd8 (ENSOTSG00005037613)	ENSOTSG00005039125	cbln12 (ENSOTSG00005039126)	ENSOTSG00005039128	ENSOTSG00005039130	ENSOTSG00005039131	ENSOTSG00005039133 #34	mmp14b (ENSOTSG00005039135) #22	ENSOTSG00005039138 #34	si:ch211-14a17.11 (ENSOTSG00005039139) #35	ENSOTSG00005039144	homeza (ENSOTSG00005039145)	ENSOTSG00005039146	ENSOTSG00005039150	ENSOTSG00005039151	carmil3 (ENSOTSG00005039156)	rem2 (ENSOTSG00005039162) #24	ENSOTSG00005039186	abhd4 (ENSOTSG00005039550) #17	ENSOTSG00005039551	mcm6 (ENSOTSG00005039552)	ENSOTSG00005039555	tmbim1a (ENSOTSG00005039558)
Coho salmon	MODERN SPECIES	23	ENSOKIG00005041761	ENSOKIG00005041767	zgc:55733 (ENSOKIG00005041777)	ENSOKIG00005041840	ENSOKIG00005041855	ENSOKIG00005041916	ENSOKIG00005041997	casq1a (ENSOKIG00005042063)	ENSOKIG00005042139	TOX4 (ENSOKIG00005042184)	chd8 (ENSOKIG00005042298)	cbln12 (ENSOKIG00005042988)	ENSOKIG00005043011	ENSOKIG00005043020	ENSOKIG00005043040	mmp14b (ENSOKIG00005043070) #22	ENSOKIG00005043167 #34	si:ch211-14a17.11 (ENSOKIG00005043208) #35	ENSOKIG00005043286	ENSOKIG00005043650	homeza (ENSOKIG00005043661)	zp3f.2 (ENSOKIG00005043686)	zp3f.2 (ENSOKIG00005043728)	zp3f.2 (ENSOKIG00005043753)	zp3f.2 (ENSOKIG00005043785)	ENSOKIG00005043805	ap1g2 (ENSOKIG00005043959)	ENSOKIG00005038430	ENSOKIG00005038452 #37	prmt5 (ENSOKIG00005038649) #25	PSMB11 (ENSOKIG00005039888) #30
Huchen	MODERN SPECIES	5416																mmp14b (ENSHHUG00000003807) #22	ENSHHUG00000003798 #34	ENSHHUG00000003763 #34	si:ch211-14a17.11 (ENSHHUG00000003751) #35	ENSHHUG00000003709
Northern pike	MODERN SPECIES	2	zgc:66427 (ENSELUG00000004094)	apol1 (ENSELUG00000004105)	zgc:55733 (ENSELUG00000004132)	DCAF8 (ENSELUG00000004151)	casq1a (ENSELUG00000004172)	ENSELUG00000029696	ENSELUG00000004195	ENSELUG00000004214	ENSELUG00000026296	chd8 (ENSELUG00000004302)	ENSELUG00000004336	cbln12 (ENSELUG00000004345)	ENSELUG00000004366	ENSELUG00000004353	ENSELUG00000004389	mmp14b (ENSELUG00000000130) #22	ENSELUG00000004511 #34	lg03h14orf119 (ENSELUG00000004544) #35	ENSELUG00000033200	ENSELUG00000033867	zp3f.1 (ENSELUG00000004558)	homeza (ENSELUG00000027804)	dhrs1 (ENSELUG00000004588)	ENSELUG00000004617	ap1g2 (ENSELUG00000004678)	ENSELUG00000004728 #37	prmt5 (ENSELUG00000004788) #25	PSMB11 (ENSELUG00000004833) #30	psmb5 (ENSELUG00000028174) #29	ENSELUG00000004935 #31	carmil3 (ENSELUG00000004977)
Osteoglossiformes	ANCESTRAL SPECIES	112	ENSGT00940000162200.a.b #30	ENSGT00940000157841 #29	ENSGT00940000159567.a.a.a #31	ENSGT00940000157990.a.a	ENSGT00940000166379.e	ENSGT00940000160062.a #24	ENSGT01030000234576.D.a.b.a.b.a.b.b	ENSGT00390000001141 #25	ENSGT00940000158278.e.b.b #37	ENSGT00950000182838.B.a.b	ENSGT00940000155856	ENSGT01030000234567.A.b.d	ENSGT00950000182893.a.b.e.b	ENSGT00940000157797	ENSGT00940000160531	ENSGT00940000157808.g #22	ENSGT00710000106790.w.b #34	ENSGT00390000007438 #35	ENSGT00940000155384.b.a	ENSGT00940000165001.a.b	ENSGT00940000164991.a.b	ENSGT00940000153649.B	ENSGT00940000154888.a	ENSGT00390000014495.n	ENSGT00940000174975.b	ENSGT01100000263533.b.b.b.a.b.a.a	ENSGT00390000019377.a.a.a	ENSGT00390000000230.j	ENSGT00390000014585	ENSGT00950000182993.B.b	ENSGT00530000063615.b
Asian bonytongue	MODERN SPECIES		psmb5 (ENSSFOG00015028916) #29	CDH24 (ENSSFOG00015010587) #31	carmil3 (ENSSFOG00015010629)	nrl (ENSSFOG00015010790)	rem2 (ENSSFOG00015010817) #24	ENSSFOG00015010829	prmt5 (ENSSFOG00015010853) #25	SLC7A8 (ENSSFOG00015010924) #37	ap1g2 (ENSSFOG00015010986)	NEDD8 (ENSSFOG00015024301)	zp3f.2 (ENSSFOG00015011065)	homeza (ENSSFOG00015011356)	dhrs1 (ENSSFOG00015011365)	ENSSFOG00015011396	ENSSFOG00015033133	mmp14b (ENSSFOG00015011416) #22	ENSSFOG00015025407 #34	si:ch211-14a17.11 (ENSSFOG00015011510) #35	ENSSFOG00015025523	ENSSFOG00015022400	cbln12 (ENSSFOG00015011562)	chd8 (ENSSFOG00015011577)	ENSSFOG00015011696	supt16h (ENSSFOG00015011724)	ENSSFOG00015030234	ENSSFOG00015027938	casq1a (ENSSFOG00015011810)	PEA15 (ENSSFOG00015029835)	pcp4l1 (ENSSFOG00015011885)	ENSSFOG00015011910	ENSSFOG00015024525
P. kingsleyae	MODERN SPECIES	276	PSMB11 (ENSPKIG00000010142) #30	psmb5 (ENSPKIG00000010120) #29	CDH24 (ENSPKIG00000010089) #31	carmil3 (ENSPKIG00000010012)	nrl (ENSPKIG00000009970)	rem2 (ENSPKIG00000009947) #24	ENSPKIG00000009935	prmt5 (ENSPKIG00000009886) #25	ENSPKIG00000009832 #37	ap1g2 (ENSPKIG00000009563)	nedd8l (ENSPKIG00000009445)	zp3f.2 (ENSPKIG00000009408)	zp3f.1 (ENSPKIG00000009377)	dhrs1 (ENSPKIG00000009350)	ENSPKIG00000009324	mmp14b (ENSPKIG00000009302) #22	ENSPKIG00000009246 #34	si:ch211-14a17.11 (ENSPKIG00000009225) #35	ENSPKIG00000009207	cbln12 (ENSPKIG00000009193)	chd8 (ENSPKIG00000009142)	TOX4 (ENSPKIG00000009093)	supt16h (ENSPKIG00000009024)	ENSPKIG00000009003	ENSPKIG00000008989	casq1a (ENSPKIG00000008951)	PEA15 (ENSPKIG00000008916)	ENSPKIG00000008876	ENSPKIG00000008850	ENSPKIG00000008837	ENSPKIG00000008707
Osteoglossocephalai	ANCESTRAL SPECIES	354											ENSGT00530000063506.B #19	ENSGT00940000174852	ENSGT00990000204936	ENSGT00510000050415.C	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b
Clupeocephala	ANCESTRAL SPECIES	134										ENSGT00530000063506.B #19	ENSGT00940000174852	ENSGT00510000050415.C	ENSGT00990000204936	ENSGT00940000163573	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00390000018596.A.a.b	ENSGT00950000182893.a.b.e.a	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000154259.a	ENSGT00940000154810	ENSGT00940000162502.a
Otomorpha	ANCESTRAL SPECIES	100														ENSGT00940000163573	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT01050000245396	ENSGT00390000018596.A.a.b	ENSGT00950000182893.a.b.e.a	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000154259.a	ENSGT00940000154810
Clupeiformes	ANCESTRAL SPECIES	97														ENSGT00940000163573	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000155031.a.a	ENSGT00940000154196.a	ENSGT00390000014903	ENSGT00940000156954	ENSGT00940000157941	ENSGT01030000234924	ENSGT01030000234620.a.b.b.a.i	ENSGT00730000111179.a	ENSGT00390000009379	ENSGT00940000168662	ENSGT00940000164916.e
Denticle herring	MODERN SPECIES		ENSDCDG00000000904	ENSDCDG00000000903	ENSDCDG00000000898	ENSDCDG00000000894	ENSDCDG00000000890	ENSDCDG00000000888	ENSDCDG00000000884	ENSDCDG00000000879	ENSDCDG00000000878	ENSDCDG00000000874	ENSDCDG00000000870	ENSDCDG00000000868	ENSDCDG00000000867	ENSDCDG00000000832	ENSDCDG00000000810 #23	mmp14a (ENSDCDG00000000698) #22	mrpl52 (ENSDCDG00000000677) #21	AJUBA (ENSDCDG00000000668) #27	acin1b (ENSDCDG00000000647) #34	efs (ENSDCDG00000000634)	MARK2 (ENSDCDG00000000504)	ENSDCDG00000000372	ENSDCDG00000000230	ENSDCDG00000000176	rcor2 (ENSDCDG00000000163)	naa40 (ENSDCDG00000000144)	b3gat3 (ENSDCDG00000000139)	arl2 (ENSDCDG00000027067)	batf2 (ENSDCDG00000027066)	PPP2R5B (ENSDCDG00000026195)	gpha2 (ENSDCDG00000026182)
Atlantic herring	MODERN SPECIES	9	ENSCHAG00000016861	gpha2 (ENSCHAG00000016872)	ENSCHAG00000016915	PPP2R5B (ENSCHAG00000016958)	arl2 (ENSCHAG00000018391)	b3gat3 (ENSCHAG00000018401)	naa40 (ENSCHAG00000018413)	rcor2 (ENSCHAG00000018483)	MARK2 (ENSCHAG00000018557)	efs (ENSCHAG00000021413)	acin1b (ENSCHAG00000021419) #34	AJUBA (ENSCHAG00000021423) #27	mrpl52 (ENSCHAG00000021444) #21	ENSCHAG00000021452	ENSCHAG00000021461 #23	mmp14a (ENSCHAG00000021474) #22	ENSCHAG00000021527	nr2f1a (ENSCHAG00000021538)	fam172a (ENSCHAG00000021542)	ENSCHAG00000021561	MCTP1 (ENSCHAG00000021588)	ENSCHAG00000021834	thoc5 (ENSCHAG00000021874)	ENSCHAG00000022205	gcnt4a (ENSCHAG00000022222)	ENSCHAG00000022227	ENSCHAG00000022234	GGCX (ENSCHAG00000002426)	snx24 (ENSCHAG00000003170)	loxa (ENSCHAG00000003203)	mpx (ENSCHAG00000003287)
Otophysi	ANCESTRAL SPECIES	9	ENSGT00940000154371.a.a	ENSGT00940000156943	ENSGT00940000157807.g.a	ENSGT00940000162502.b	ENSGT00390000005342	ENSGT00390000013043	ENSGT00390000011904	ENSGT00940000154810.kb.b	ENSGT00940000154259.a	ENSGT00940000156061	ENSGT00940000158278.e.a #37	ENSGT00940000155856.cb	ENSGT00940000159574	ENSGT00940000163573	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT01050000245396	ENSGT00390000018596.A.a.b	ENSGT00950000182893.a.b.e.a	ENSGT00960000187089	ENSGT00390000007726.b	ENSGT00390000018729.b	ENSGT00940000159026	ENSGT00390000018904	ENSGT00940000158132.o
Characiphysae	ANCESTRAL SPECIES	45	ENSGT00390000013043	ENSGT00950000182932.B.b	ENSGT00940000159015	ENSGT00390000011904	ENSGT00940000154810.kb.a	ENSGT00940000154810.kb.b	ENSGT00940000154259.a	ENSGT00940000156061	ENSGT00940000158278.e.a #37	ENSGT00940000155856.cb	ENSGT00940000159574	ENSGT01050000244843.d.i.a.a.a	ENSGT01040000240385.A.b.b.b.a.a.b.a.a.b	ENSGT01040000240385.A.b.b.b.a.a.a.c.a	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00390000018596.A.a.b	ENSGT00950000182893.a.b.e.a	ENSGT01040000240385.A.b.b.b.a.a.b.b.b	ENSGT00960000187089	ENSGT00390000007726.b	ENSGT00390000018729.b	ENSGT00940000159026	ENSGT00390000018904	ENSGT00940000158132.o
Channel catfish	MODERN SPECIES	26	SVEP1 (ENSIPUG00000007074)	SLC7A8 (ENSIPUG00000006979) #37	nedd8 (ENSIPUG00000006950)	ENSIPUG00000006938	gmpr2 (ENSIPUG00000006903)	ENSIPUG00000006888	ENSIPUG00000006875	gmpr2 (ENSIPUG00000006839)	ENSIPUG00000006806	ENSIPUG00000006793	ENSIPUG00000006783	ENSIPUG00000006758	ENSIPUG00000006706	ENSIPUG00000006678	lrp10 (ENSIPUG00000006635) #23	MMP14 (ENSIPUG00000006564) #22	mrpl52 (ENSIPUG00000006550) #21	ajuba (ENSIPUG00000006533) #27	acin1b (ENSIPUG00000006269) #34	NEDD9 (ENSIPUG00000006217)	dhrs4 (ENSIPUG00000006121)	tinf2 (ENSIPUG00000006103)	ENSIPUG00000006090	ENSIPUG00000006040	cideb (ENSIPUG00000006003)	homezb (ENSIPUG00000005992)	ENSIPUG00000005984	ENSIPUG00000005972	ENSIPUG00000005938	ENSIPUG00000005925	syt4 (ENSIPUG00000005912)
Characiphysae_b	ANCESTRAL SPECIES	59	ENSGT00390000013043	ENSGT00950000182932.B.b	ENSGT00940000159015	ENSGT00390000011904	ENSGT00940000154810.kb.a	ENSGT00940000154810.kb.b	ENSGT00940000154259.a	ENSGT00940000156061	ENSGT00940000158278.e.a #37	ENSGT00940000155856.cb	ENSGT00940000159574	ENSGT01050000244843.d.i.a.a.a	ENSGT01040000240385.A.b.b.b.a.a.b.a.a.b	ENSGT01040000240385.A.b.b.b.a.a.a.c.a	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00390000018596.A.a.b	ENSGT00950000182893.a.b.e.a	ENSGT01040000240385.A.b.b.b.a.a.b.b.b	ENSGT00960000187089	ENSGT00390000007726.b	ENSGT00390000018729.b	ENSGT00940000159026	ENSGT00390000018904	ENSGT00940000158132.o
Characoidei	ANCESTRAL SPECIES	73	ENSGT00390000013043	ENSGT00950000182932.B.b	ENSGT00940000159015	ENSGT00390000011904	ENSGT00940000154810.kb.a	ENSGT00940000154810.kb.b	ENSGT00940000154259.a	ENSGT00940000156061	ENSGT00940000158278.e.a #37	ENSGT00940000155856.cb	ENSGT00940000159574	ENSGT01050000244843.d.i.a.a.a	ENSGT01040000240385.A.b.b.b.a.a.b.a.a.b	ENSGT01040000240385.A.b.b.b.a.a.a.c.a.b	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00390000018596.A.a.b	ENSGT00950000182893.a.b.e.a	ENSGT01040000240385.A.b.b.b.a.a.b.b.b.f.b	ENSGT00960000187089	ENSGT00390000007726.b	ENSGT00390000018729.b	ENSGT00940000159026	ENSGT00390000018904	ENSGT00940000158132.o
Red-bellied piranha	MODERN SPECIES	339	poln (ENSPNAG00000021241)	haus3 (ENSPNAG00000021272)	ptgr1.1 (ENSPNAG00000003678)	ENSPNAG00000021323	ENSPNAG00000021330	TXN (ENSPNAG00000021335)	SVEP1 (ENSPNAG00000021584)	ENSPNAG00000021623	slc7a8a (ENSPNAG00000003693) #37	nedd8 (ENSPNAG00000021723)	gmpr2 (ENSPNAG00000021781)	ENSPNAG00000021860	ENSPNAG00000021880	ENSPNAG00000021898	ENSPNAG00000021910 #23	mmp14a (ENSPNAG00000005852) #22	mrpl52 (ENSPNAG00000021993) #21	AJUBA (ENSPNAG00000022017) #27	acin1b (ENSPNAG00000022123) #34	efs (ENSPNAG00000003710)	dhrs4 (ENSPNAG00000022154)	tinf2 (ENSPNAG00000022169)	cideb (ENSPNAG00000022175)	homezb (ENSPNAG00000022198)	ENSPNAG00000022594	ENSPNAG00000022625
Mexicana tetra	MODERN SPECIES	7	slc7a8a (ENSAMXG00000021143) #37	nedd8 (ENSAMXG00000033413)	gmpr2 (ENSAMXG00000005057)	ENSAMXG00000003901	ENSAMXG00000040455	ENSAMXG00000043204	ENSAMXG00000029334	ENSAMXG00000043378	ENSAMXG00000005060	ENSAMXG00000003895	ENSAMXG00000032497	ENSAMXG00000035305	ENSAMXG00000037487	ENSAMXG00000043256	ENSAMXG00000042711 #23	mmp14a (ENSAMXG00000033354) #22	mrpl52 (ENSAMXG00000041681) #21	ENSAMXG00000003875 #27	acin1b (ENSAMXG00000036892) #34	efs (ENSAMXG00000003838)	dhrs4 (ENSAMXG00000003836)	tinf2 (ENSAMXG00000003829)	cideb (ENSAMXG00000003822)	homezb (ENSAMXG00000003816)	ENSAMXG00000003753	ENSAMXG00000003798	ENSAMXG00000043354	ENSAMXG00000005035	ENSAMXG00000032115	ENSAMXG00000037727	ENSAMXG00000039211
Electric eel	MODERN SPECIES	170	ENSEEEG00000006130	faah2b (ENSEEEG00000006129)	nelfa (ENSEEEG00000006120)	C4orf48 (ENSEEEG00000006118)	nat8l (ENSEEEG00000006116)	poln (ENSEEEG00000006113)	haus3 (ENSEEEG00000006109)	ptgr1.1 (ENSEEEG00000006108)	txn (ENSEEEG00000006106)	SVEP1 (ENSEEEG00000006104)	slc7a8a (ENSEEEG00000006099) #37	nedd8 (ENSEEEG00000006095)	gmpr2 (ENSEEEG00000006064)	ENSEEEG00000005985	ENSEEEG00000005973 #23	mmp14a (ENSEEEG00000005937) #22	mrpl52 (ENSEEEG00000005930) #21	AJUBA (ENSEEEG00000005914) #27	acin1b (ENSEEEG00000005872) #34	efs (ENSEEEG00000005871)	dhrs4 (ENSEEEG00000005869)	tinf2 (ENSEEEG00000005867)	cideb (ENSEEEG00000005866)	homezb (ENSEEEG00000005864)	ENSEEEG00000005809	ENSEEEG00000005726	ENSEEEG00000005620	ENSEEEG00000005435	ENSEEEG00000005423	ENSEEEG00000005407	syt4 (ENSEEEG00000005405)
Cyprinoidei	ANCESTRAL SPECIES	14	ENSGT00940000154371.a.a	ENSGT00940000156943	ENSGT00940000157807.g.a	ENSGT01040000240385.A.b.b.b.a.a.b.a.b.a.a.a.a.a	ENSGT00940000162502.b	ENSGT00390000005342	ENSGT00390000013043	ENSGT00390000011904	ENSGT00940000154810.kb.a	ENSGT00940000154810.kb.b	ENSGT00940000154259.b.a	ENSGT00940000156061	ENSGT00940000158278.e.a #37	ENSGT00940000163573	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT01050000245396	ENSGT00390000018596.A.a.b	ENSGT00950000182893.a.b.e.a	ENSGT00980000198821.a	ENSGT00960000187089	ENSGT00390000007726.b	ENSGT00390000018729.b	ENSGT00940000159026	ENSGT00390000018904
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	236	ENSGT00940000162502.b.a.b	ENSGT00390000005342.c.b	ENSGT00390000013043.ib.a	ENSGT00950000182932.B.b.e	ENSGT00940000159015.f	ENSGT00390000011904.h	ENSGT00940000154810.kb.a.c.a	ENSGT00940000154810.kb.a.d	ENSGT00940000154259.b.a.b	ENSGT00940000156061.a	ENSGT00940000158278.e.a.a #37	ENSGT00940000165806.l	ENSGT00940000159574.q	ENSGT01040000240385.A.b.b.b.a.a.b.a.b.a.a.a.a.b.a	ENSGT00940000160783.a #23	ENSGT00940000157808.h.a #22
Goldfish	MODERN SPECIES	25	GBA2 (ENSCARG00000056915)	rgp1 (ENSCARG00000057505)	pik3c3 (ENSCARG00000057579)	TESK1 (ENSCARG00000058330)	nelfa (ENSCARG00000058340)	C4orf48 (ENSCARG00000058907)	nat8l (ENSCARG00000058925)	haus3 (ENSCARG00000058944)	ptgr1.1 (ENSCARG00000058963)	txn (ENSCARG00000059020)	SVEP1 (ENSCARG00000059090)	slc7a8a (ENSCARG00000060217) #37	ENSCARG00000060362	gmpr2 (ENSCARG00000060420)	ENSCARG00000060507 #23	mmp14a (ENSCARG00000060552) #22	ENSCARG00000060726	AJUBA (ENSCARG00000060749) #27	acin1b (ENSCARG00000060813) #34	efs (ENSCARG00000061070)	dhrs4 (ENSCARG00000061126)	ENSCARG00000061459	cideb (ENSCARG00000061480)	homezb (ENSCARG00000061525)	syt4 (ENSCARG00000061562)	vbp1 (ENSCARG00000061574)	rab39bb (ENSCARG00000061586)	zgc:162171 (ENSCARG00000061597)	ENSCARG00000061625	zgc:92429 (ENSCARG00000062292)	ENSCARG00000062343
Cyprininae_a	ANCESTRAL SPECIES	60	ENSGT00940000162502.b.a.b	ENSGT00390000005342.c.b	ENSGT00390000013043.ib.a	ENSGT00950000182932.B.b.e	ENSGT00940000159015.f	ENSGT00390000011904.h	ENSGT00940000154810.kb.a.c.a	ENSGT00940000154810.kb.a.d	ENSGT00940000154259.b.a.b	ENSGT00940000156061.a	ENSGT00940000158278.e.a.a #37	ENSGT00940000155856.cb.b	ENSGT00940000159574.q	ENSGT01040000240385.A.b.b.b.a.a.b.a.b.a.a.a.a.b.a	ENSGT00940000160783.a #23	ENSGT00940000157808.h.a #22
Common carp reference	MODERN SPECIES	6	ENSCCRG00000078136	pik3c3 (ENSCCRG00000001202)	ENSCCRG00000076812	faah2b (ENSCCRG00000037928)	nelfa (ENSCCRG00000037895)	C4orf48 (ENSCCRG00000052931)	nat8l (ENSCCRG00000063238)	haus3 (ENSCCRG00000029005)	ptgr1.1 (ENSCCRG00000056350)	txn (ENSCCRG00000006754)	ENSCCRG00000028002	slc7a8a (ENSCCRG00000075789) #37	nedd8 (ENSCCRG00000081951)	si:ch211-216p19.6 (ENSCCRG00000071241)	ENSCCRG00000071206 #23	mmp14a (ENSCCRG00000075429) #22	mrpl52 (ENSCCRG00000060943) #21	ENSCCRG00000021852 #27	acin1b (ENSCCRG00000021894) #34	efs (ENSCCRG00000051671)	dhrs4 (ENSCCRG00000019742)	ENSCCRG00000062745	cideb (ENSCCRG00000081549)	homezb (ENSCCRG00000051676)	syt4 (ENSCCRG00000061427)	vbp1 (ENSCCRG00000072042)	rab39bb (ENSCCRG00000081673)	zgc:162171 (ENSCCRG00000067611)	ENSCCRG00000039685	zgc:92429 (ENSCCRG00000034156)	ENSCCRG00000032889
Golden-line barbel	MODERN SPECIES	98	nat8l (ENSSGRG00000047494)	nat8l (ENSSGRG00000047493)	poln (ENSSGRG00000047492)	haus3 (ENSSGRG00000047490)	ptgr1.1 (ENSSGRG00000047453)	ENSSGRG00000047441	txn (ENSSGRG00000047438)	SVEP1 (ENSSGRG00000047435)	ENSSGRG00000047433	ENSSGRG00000047432	slc7a8a (ENSSGRG00000047430) #37	nedd8 (ENSSGRG00000047416)	gmpr2 (ENSSGRG00000047188)	si:ch211-216p19.6 (ENSSGRG00000047183)	ENSSGRG00000047182 #23	mmp14a (ENSSGRG00000047179) #22	AJUBA (ENSSGRG00000047177) #27	acin1b (ENSSGRG00000047170) #34	dhrs4 (ENSSGRG00000047166)	dhrs4 (ENSSGRG00000047161)	tinf2 (ENSSGRG00000047157)	cideb (ENSSGRG00000047155)	homezb (ENSSGRG00000047153)	ENSSGRG00000047150	ENSSGRG00000047126	ENSSGRG00000047124	syt4 (ENSSGRG00000047123)	vbp1 (ENSSGRG00000047121)	rab39bb (ENSSGRG00000047118)	zgc:162171 (ENSSGRG00000047116)	ENSSGRG00000047063
Cyprininae	ANCESTRAL SPECIES	1	ENSGT00390000005342.c.a	ENSGT00390000013043.hb	ENSGT00950000182932.B.b.f	ENSGT00940000159015.e	ENSGT00390000011904.g	ENSGT00940000154810.kb.a.c.b	ENSGT00940000154810.kb.b	ENSGT00940000154259.b.a.a	ENSGT00940000156061.b	ENSGT00940000158278.e.a.b #37	ENSGT00940000155856.cb	ENSGT00940000159574.r	ENSGT01040000240385.A.b.b.b.a.a.b.a.b.a.a.a.a.b.b	ENSGT00940000163573	ENSGT00940000160783.b #23	ENSGT00940000157808.h.b #22	ENSGT00390000005763 #21	ENSGT00940000160978.a.a #27	ENSGT00940000160978.a.b #27	ENSGT00710000106790.w.c.b #34	ENSGT00950000183008.a.a.b.c.b	ENSGT00940000164342.h	ENSGT01050000245396	ENSGT00390000018596.A.a.b.a	ENSGT00950000182893.a.b.e.a.b	ENSGT00940000159026.e	ENSGT00390000018904.e	ENSGT00940000158132.o.b	ENSGT00940000165121.b.a.b	ENSGT00950000183068.a.a.a.b.a	ENSGT00940000159429.g
Goldfish	MODERN SPECIES	47	sh3gl3a (ENSCARG00000011278)	ENSCARG00000011341	nat8l (ENSCARG00000011352)	poln (ENSCARG00000011376)	haus3 (ENSCARG00000011441)	ENSCARG00000011447	txn (ENSCARG00000011459)	SVEP1 (ENSCARG00000011658)	slc7a8a (ENSCARG00000015510) #37	nedd8 (ENSCARG00000015799)	ENSCARG00000015809	si:ch211-216p19.6 (ENSCARG00000015834)	ENSCARG00000015840	ENSCARG00000015843	ENSCARG00000015851 #23	mmp14a (ENSCARG00000015860) #22	mrpl52 (ENSCARG00000015902) #21	AJUBA (ENSCARG00000015915) #27	acin1b (ENSCARG00000015950) #34	efs (ENSCARG00000016000)	dhrs4 (ENSCARG00000016035)	tinf2 (ENSCARG00000016079)	cideb (ENSCARG00000016100)	homezb (ENSCARG00000016125)	ENSCARG00000016128	ENSCARG00000016135	ENSCARG00000016143	ENSCARG00000016171	ENSCARG00000016181	syt4 (ENSCARG00000016232)	vbp1 (ENSCARG00000016248)
Cyprininae_a	ANCESTRAL SPECIES	2	ENSGT00390000013043.hb	ENSGT00950000182932.B.b.f	ENSGT00940000159015.e	ENSGT00390000011904.g	ENSGT00940000154810.kb.a.c.b	ENSGT00940000154810.kb.b	ENSGT00940000154259.b.a.a	ENSGT00940000156061.b	ENSGT00940000158278.e.a.b #37	ENSGT00940000155856.cb.a	ENSGT00940000159574.r	ENSGT01040000240385.A.b.b.b.a.a.b.a.b.a.a.a.a.b.b	ENSGT01040000240385.H.g.h.b	ENSGT00940000163573	ENSGT00940000160783.b #23	ENSGT00940000157808.h.b #22	ENSGT00390000005763 #21	ENSGT00940000160978.a.a #27	ENSGT00940000160978.a.b #27	ENSGT00710000106790.w.d #34	ENSGT00710000106790.w.c.a #34	ENSGT00950000183008.a.a.b.c.a	ENSGT00940000164342.g	ENSGT00400000022326.a	ENSGT00710000106790.w.c.b #34	ENSGT00950000183008.a.a.b.c.b	ENSGT00940000164342.h	ENSGT01050000245396	ENSGT00390000018596.A.a.b.b	ENSGT00950000182893.a.b.e.a.a	ENSGT00980000198821.a
Common carp reference	MODERN SPECIES		nelfa (ENSCCRG00000037937)	ENSCCRG00000037881	poln (ENSCCRG00000046511)	nat8l (ENSCCRG00000054343)	haus3 (ENSCCRG00000028090)	txn (ENSCCRG00000028080)	ENSCCRG00000006764	slc7a8a (ENSCCRG00000027989) #37	ENSCCRG00000069760	nedd8 (ENSCCRG00000063681)	gmpr2 (ENSCCRG00000057434)	si:ch211-216p19.6 (ENSCCRG00000029931)	ENSCCRG00000029923	ENSCCRG00000080597	ENSCCRG00000069495 #23	mmp14a (ENSCCRG00000074414) #22	mrpl52 (ENSCCRG00000021859) #21	ENSCCRG00000054591 #27	acin1b (ENSCCRG00000021844) #34	efs (ENSCCRG00000007565)	dhrs4 (ENSCCRG00000076827)	tinf2 (ENSCCRG00000019741)	cideb (ENSCCRG00000019739)	homezb (ENSCCRG00000080078)	ENSCCRG00000064037	ENSCCRG00000019670	ENSCCRG00000019653	ENSCCRG00000019648	ENSCCRG00000019640	syt4 (ENSCCRG00000019636)	vbp1 (ENSCCRG00000066132)
Golden-line barbel	MODERN SPECIES	23	nelfa (ENSSGRG00000046758)	C4orf48 (ENSSGRG00000046977)	nat8l (ENSSGRG00000046978)	poln (ENSSGRG00000046979)	haus3 (ENSSGRG00000046980)	ptgr1.1 (ENSSGRG00000046981)	PTGR1 (ENSSGRG00000046983)	txn (ENSSGRG00000046984)	SVEP1 (ENSSGRG00000046985)	slc7a8a (ENSSGRG00000046992) #37	nedd8 (ENSSGRG00000047070)	ENSSGRG00000047071	si:ch211-216p19.6 (ENSSGRG00000047073)	ENSSGRG00000047074	ENSSGRG00000047076 #23	mmp14a (ENSSGRG00000047077) #22	mrpl52 (ENSSGRG00000047098) #21	AJUBA (ENSSGRG00000047100) #27	acin1b (ENSSGRG00000047102) #34	efs (ENSSGRG00000047109)	dhrs4 (ENSSGRG00000047111)	tinf2 (ENSSGRG00000047132)	ENSSGRG00000047133	cideb (ENSSGRG00000047134)	homezb (ENSSGRG00000047135)	ENSSGRG00000047137	ENSSGRG00000047138	ENSSGRG00000047141	syt4 (ENSSGRG00000047144)	vbp1 (ENSSGRG00000047145)	rab39bb (ENSSGRG00000047147)
Zebrafish	MODERN SPECIES	22	C7H4orf48 (ENSDARG00000089877)	nat8l (ENSDARG00000077256)	poln (ENSDARG00000103961)	haus3 (ENSDARG00000061385)	ptgr1.1 (ENSDARG00000024877)	ENSDARG00000087017	txn (ENSDARG00000044125)	SVEP1 (ENSDARG00000013526)	slc7a8a (ENSDARG00000075831) #37	nedd8 (ENSDARG00000007989)	gmpr2 (ENSDARG00000061301)	si:ch211-216p19.6 (ENSDARG00000027907)	zgc:153151 (ENSDARG00000069563)	ENSDARG00000098915	ENSDARG00000054539 #23	mmp14a (ENSDARG00000002235) #22	mrpl52 (ENSDARG00000090568) #21	AJUBA (ENSDARG00000077842) #27	acin1b (ENSDARG00000026842) #34	efs (ENSDARG00000088835)	dhrs4 (ENSDARG00000021135)	tinf2 (ENSDARG00000054473)	cideb (ENSDARG00000012640)	homezb (ENSDARG00000024598)	ENSDARG00000105607	ENSDARG00000101235	ENSDARG00000076443	ENSDARG00000102029	syt4 (ENSDARG00000036505)	vbp1 (ENSDARG00000030241)	rab39bb (ENSDARG00000036501)
Euteleosteomorpha	ANCESTRAL SPECIES	28	ENSGT00940000160323.a.a	ENSGT00940000167281	ENSGT00940000157623	ENSGT00940000160414.c	ENSGT00940000163776.a.a	ENSGT01030000234590.B.a.b	ENSGT00940000176904	ENSGT00550000075058	ENSGT00390000006227	ENSGT00390000002849	ENSGT00940000155384.b.b	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00510000050415.C	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT01050000245396	ENSGT00390000018596.A.a.b	ENSGT00950000182893.a.b.e.a	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.i.a	ENSGT00940000154810
Acanthomorphata	ANCESTRAL SPECIES	50	ENSGT00940000167107	ENSGT01030000234590.B.a.b	ENSGT00940000176904	ENSGT00550000075058	ENSGT00390000006227	ENSGT00390000002849	ENSGT00940000155384.b.b	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00510000050415.C.j	ENSGT00940000175830	ENSGT00940000174852	ENSGT00510000050415.C.i	ENSGT00940000163573	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT01050000245396	ENSGT00390000018596.A.a.b	ENSGT00940000176132	ENSGT00980000198821	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.i.a
Euacanthomorphacea	ANCESTRAL SPECIES	17	ENSGT00940000167107	ENSGT01030000234590.B.a.b	ENSGT00940000176904	ENSGT00550000075058	ENSGT00390000006227	ENSGT00390000002849	ENSGT00940000155384.b.b	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00510000050415.C.j	ENSGT00940000175830	ENSGT00940000174852	ENSGT00510000050415.C.i.a.b	ENSGT00940000163573	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT01050000245396	ENSGT00390000018596.A.a.b	ENSGT00940000176132	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.i.a	ENSGT00940000154810
Percomorphaceae	ANCESTRAL SPECIES	18	ENSGT00940000167107	ENSGT01030000234590.B.a.b	ENSGT00940000176904	ENSGT00550000075058	ENSGT00390000006227	ENSGT00390000002849	ENSGT00940000155384.b.b	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00510000050415.C.j	ENSGT00940000175830	ENSGT00940000174852	ENSGT00510000050415.C.i.a.b	ENSGT00940000163573	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT01050000245396	ENSGT00390000018596.A.a.b	ENSGT00940000176132	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.i.a	ENSGT00940000154810
Tiger tail seahorse	MODERN SPECIES	506	tnfsf12 (ENSHCOG00000010105)	CHD3 (ENSHCOG00000010170)	naa38 (ENSHCOG00000010193)	dnajc3b (ENSHCOG00000010223)	cldn15a (ENSHCOG00000010230)	fis1 (ENSHCOG00000010246)	taf6l (ENSHCOG00000010268)	cth1 (ENSHCOG00000010276)	mta2 (ENSHCOG00000010372)	EML3 (ENSHCOG00000010392)	ecsit (ENSHCOG00000010406)	ZFTA (ENSHCOG00000010456)	rtn3 (ENSHCOG00000010493)	ENSHCOG00000010502	ENSHCOG00000010524 #23	mmp14a (ENSHCOG00000010573) #22	mrpl52 (ENSHCOG00000010579) #21	AJUBA (ENSHCOG00000010600) #27	acin1b (ENSHCOG00000000814) #34	efs (ENSHCOG00000010768)	dhrs4 (ENSHCOG00000010787)	tinf2 (ENSHCOG00000010794)	cideb (ENSHCOG00000010798)	gmpr2 (ENSHCOG00000010809)	ENSHCOG00000010817	slc7a8a (ENSHCOG00000010836) #37	ENSHCOG00000010847	ENSHCOG00000010869	ENSHCOG00000010878	ENSHCOG00000010889	ENSHCOG00000010900
Percomorphaceae_B	ANCESTRAL SPECIES	19	ENSGT00390000002849	ENSGT00940000155384.b.b	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00940000174852	ENSGT01030000239687	ENSGT00940000174573	ENSGT00510000050415.C.j.b	ENSGT00940000175830	ENSGT01090000260150	ENSGT00510000050415.C.i.a.a	ENSGT00940000176975	ENSGT00510000050415.C.i.a.b	ENSGT00940000163573	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT01030000235234.b	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT01050000245396	ENSGT00390000018596.A.a.b	ENSGT00940000176132	ENSGT00940000175229	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061
Ovalentaria	ANCESTRAL SPECIES	20	ENSGT00550000075058	ENSGT00390000006227	ENSGT00390000002849	ENSGT00940000155384.b.b	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00510000050415.C.j.b	ENSGT00940000175830	ENSGT01090000260150	ENSGT00510000050415.C.i.a.a	ENSGT00940000174852	ENSGT00940000176975	ENSGT00510000050415.C.i.a.b	ENSGT00940000163573	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT01030000235234.b	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT01050000245396	ENSGT00390000018596.A.a.b	ENSGT00940000176132	ENSGT00940000175229	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061
Atherinomorphae	ANCESTRAL SPECIES	22	ENSGT00390000006227	ENSGT00390000002849	ENSGT00940000155384.b.b	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00510000050415.C.j.b.d	ENSGT01090000260150	ENSGT00510000050415.C.i.a.a	ENSGT00940000176975	ENSGT00940000175830	ENSGT00510000050415.C.j.b.c	ENSGT00940000174852	ENSGT00510000050415.C.i.a.b	ENSGT00940000163573	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT01030000235234.b	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00390000018596.A.a.b	ENSGT00940000176132	ENSGT00940000175229	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.i.b.a
Cyprinodontiformes	ANCESTRAL SPECIES	22	ENSGT00550000075058	ENSGT00390000006227	ENSGT00390000002849	ENSGT00940000155384.b.b	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00510000050415.C.j.b.d	ENSGT01090000260150	ENSGT00510000050415.C.i.a.a	ENSGT00510000050415.C.j.b.c.b	ENSGT00940000175830	ENSGT00940000174852	ENSGT00510000050415.C.i.a.b	ENSGT00940000163573	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT01030000235234.b	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00390000018596.A.a.b	ENSGT00940000176132	ENSGT00940000175229	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.i.b.a
Aplocheiloidei	ANCESTRAL SPECIES	55											ENSGT01090000260150	ENSGT00510000050415.C.i.a.a	ENSGT00940000174852	ENSGT00510000050415.C.i.a.b	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00390000018596.A.a.b	ENSGT00940000176132	ENSGT01030000234583.a.a.c.b.a.b.c.a	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.i.b.b	ENSGT00940000154810
Turquoise killifish	MODERN SPECIES	1613	tm4sf5 (ENSNFUG00015000707)	mettl3 (ENSNFUG00015000679)	ttc5 (ENSNFUG00015000653)	CCNB1IP1 (ENSNFUG00015000639)	ENSNFUG00015000631	SLC7A7 (ENSNFUG00015000574) #20	OXA1L (ENSNFUG00015000520) #19	ENSNFUG00015000509	ENSNFUG00015000495	ENSNFUG00015000476	ENSNFUG00015000471	ENSNFUG00015000464	CR788286.1 (ENSNFUG00015000456)	Nfu_g_1_003722 (ENSNFUG00015000451)	LRP10 (ENSNFUG00015000444) #23	MMP14A (ENSNFUG00015000298) #22	MRPL52 (ENSNFUG00015000153) #21	AJUBA (ENSNFUG00015000137) #27	acin1b (ENSNFUG00015000107) #34	CR388231.3 (ENSNFUG00015000088)	dhrs4 (ENSNFUG00015000073)	TINF2 (ENSNFUG00015006329)	cideb (ENSNFUG00015006322)	WU (ENSNFUG00015006320)	GMPR2 (ENSNFUG00015006315)	ENSNFUG00015006298	slc7a8a (ENSNFUG00015006016) #37	ENSNFUG00015005994	ENSNFUG00015005824	SVEP1 (ENSNFUG00015005269)	TXNDC2 (ENSNFUG00015005045)
Mangrove rivulus	MODERN SPECIES	190					ENSKMAG00000011688	ENSKMAG00000011699	ENSKMAG00000011723	ENSKMAG00000011747	ENSKMAG00000011772	ENSKMAG00000011782	ENSKMAG00000011790	ENSKMAG00000011795	ENSKMAG00000011804	ENSKMAG00000011818	ENSKMAG00000011841 #23	mmp14a (ENSKMAG00000011883) #22	mrpl52 (ENSKMAG00000011899) #21	AJUBA (ENSKMAG00000011919) #27	acin1b (ENSKMAG00000011943) #34	efs (ENSKMAG00000011970)	dhrs4 (ENSKMAG00000011996)	tinf2 (ENSKMAG00000012037)	cideb (ENSKMAG00000012085)	ENSKMAG00000012106	gmpr2 (ENSKMAG00000012118)	nedd8 (ENSKMAG00000012146)	slc7a8a (ENSKMAG00000012162) #37	SVEP1 (ENSKMAG00000012226)	ENSKMAG00000012325	ptgr1.1 (ENSKMAG00000012354)	haus3 (ENSKMAG00000012387)
Cyprinodontoidei	ANCESTRAL SPECIES	21	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00510000050415.C.j.b.d	ENSGT00940000174852	ENSGT01090000260150.e.a	ENSGT00510000050415.C.i.a.a.c	ENSGT01090000260520.b	ENSGT01090000260150.f	ENSGT00510000050415.C.i.a.a.d	ENSGT00510000050415.C.j.b.c.b	ENSGT00940000175830	ENSGT00940000168139	ENSGT00510000050415.C.i.a.b	ENSGT00940000163573	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT01030000235234.b	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00390000018596.A.a.b	ENSGT00940000176132	ENSGT00940000175229	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.i.b.a
NAME_4	ANCESTRAL SPECIES	118	ENSGT01030000234590.B.a.b	ENSGT00940000176904	ENSGT00550000075058	ENSGT00390000006227	ENSGT00390000002849	ENSGT00940000155384.b.b	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00510000050415.C.j.b.d	ENSGT01090000260150.f	ENSGT00510000050415.C.i.a.a.d	ENSGT00510000050415.C.j.b.c.b	ENSGT00940000168459	ENSGT00510000050415.C.i.a.b	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT01030000235234.b	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00390000018596.A.a.b	ENSGT00940000175229	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.i.b.a
Mummichog	MODERN SPECIES	435							ENSFHEG00000019366	ENSFHEG00000019390	ENSFHEG00000019400	ENSFHEG00000019405	ENSFHEG00000019410	ENSFHEG00000019431	ENSFHEG00000019433	ENSFHEG00000019445	ENSFHEG00000019478 #23	mmp14a (ENSFHEG00000019517) #22	mrpl52 (ENSFHEG00000019528) #21	AJUBA (ENSFHEG00000019560) #27	ENSFHEG00000019641 #34	ENSFHEG00000019655	efs (ENSFHEG00000019666)	dhrs4 (ENSFHEG00000020172)	tinf2 (ENSFHEG00000020239)	cideb (ENSFHEG00000020263)	ENSFHEG00000020288	ENSFHEG00000020300	gmpr2 (ENSFHEG00000020343)	nedd8 (ENSFHEG00000020364)	slc7a8a (ENSFHEG00000000856) #37	SVEP1 (ENSFHEG00000020551)	ENSFHEG00000020601
Sheepshead minnow	MODERN SPECIES	1201								ENSCVAG00000007071	ENSCVAG00000007114	ENSCVAG00000007134	ENSCVAG00000007160	ENSCVAG00000007169	ENSCVAG00000007179	ENSCVAG00000007189	ENSCVAG00000007207 #23	mmp14a (ENSCVAG00000007219) #22	mrpl52 (ENSCVAG00000007230) #21	AJUBA (ENSCVAG00000007253) #27
Poeciliinae	ANCESTRAL SPECIES	21	ENSGT00390000002849	ENSGT00940000155384.b.b	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00510000050415.C.j.b.d	ENSGT00940000174852	ENSGT01090000260150.e.a	ENSGT00510000050415.C.i.a.a.c	ENSGT00510000050415.C.i.a.a.d	ENSGT00510000050415.C.j.b.c.b	ENSGT01090000260150.e.b	ENSGT01100000265783	ENSGT00510000050415.C.i.a.b	ENSGT00940000163573	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00390000018596.A.a.b	ENSGT00940000176132	ENSGT00940000175229	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.i.b.a	ENSGT00940000163988.i.a
Poecilia	ANCESTRAL SPECIES	32	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00510000050415.C.j.b.d	ENSGT00940000174852	ENSGT01090000260150.e.a	ENSGT00510000050415.C.i.a.a.c	ENSGT00510000050415.C.i.a.a.d.e	ENSGT00510000050415.C.j.b.c.b.a.a	ENSGT00940000175830	ENSGT00510000050415.C.j.b.c.b.a.b	ENSGT01090000260150.e.b	ENSGT01100000265783	ENSGT00510000050415.C.i.a.b	ENSGT00940000163573	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00390000018596.A.a.b	ENSGT00940000176132	ENSGT01030000234583.a.a.c.b.a.b.c.a	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.i.b.a	ENSGT00940000163988.i.a
NAME_6	ANCESTRAL SPECIES	76												ENSGT00940000168139	ENSGT00510000050415.C.i.a.b	ENSGT00940000163573	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00390000018596.A.a.b	ENSGT00940000176132	ENSGT01030000234583.a.a.c.b.a.b.c.a	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.i.b.a	ENSGT00940000163988.i.a
Sailfin molly	MODERN SPECIES	111												ENSPLAG00000021262	ENSPLAG00000000458	ENSPLAG00000021277	ENSPLAG00000021317 #23	mmp14a (ENSPLAG00000021346) #22	mrpl52 (ENSPLAG00000021357) #21	AJUBA (ENSPLAG00000021363) #27	acin1b (ENSPLAG00000021380) #34	efs (ENSPLAG00000021384)	dhrs4 (ENSPLAG00000021419)	tinf2 (ENSPLAG00000021427)	cideb (ENSPLAG00000021444)	ENSPLAG00000021449	ENSPLAG00000021462	gmpr2 (ENSPLAG00000021491)	nedd8 (ENSPLAG00000021505)	slc7a8a (ENSPLAG00000021534) #37	SVEP1 (ENSPLAG00000021660)	ENSPLAG00000021675	ENSPLAG00000021679
Amazon molly	MODERN SPECIES	399										ENSPFOG00000009778	ENSPFOG00000024354	ENSPFOG00000023919	ENSPFOG00000009722	ENSPFOG00000009690	ENSPFOG00000009619 #23	mmp14a (ENSPFOG00000009342) #22	mrpl52 (ENSPFOG00000009334) #21	AJUBA (ENSPFOG00000009281) #27	acin1b (ENSPFOG00000009202) #34	efs (ENSPFOG00000009177)	dhrs4 (ENSPFOG00000009099)	tinf2 (ENSPFOG00000009052)	cideb (ENSPFOG00000009017)	ENSPFOG00000022603	gmpr2 (ENSPFOG00000008935)	slc7a8a (ENSPFOG00000008767) #37	SVEP1 (ENSPFOG00000007600)	ENSPFOG00000007567	ENSPFOG00000024676	ENSPFOG00000007493	PTGR1 (ENSPFOG00000007459)
Guppy	MODERN SPECIES	444	ENSPREG00000005210	ENSPREG00000005187	ENSPREG00000005180	ENSPREG00000005149	ENSPREG00000005123	ENSPREG00000005114	ENSPREG00000005088	ENSPREG00000005078	ENSPREG00000005056	ENSPREG00000005036	ENSPREG00000005024	ENSPREG00000005017	ENSPREG00000004998	ENSPREG00000004971	ENSPREG00000004946 #23	mmp14a (ENSPREG00000004863) #22	mrpl52 (ENSPREG00000004842) #21	AJUBA (ENSPREG00000004806) #27	acin1b (ENSPREG00000004790) #34	efs (ENSPREG00000004777)	dhrs4 (ENSPREG00000004686)	tinf2 (ENSPREG00000004631)	cideb (ENSPREG00000004615)	ENSPREG00000004610	ENSPREG00000004596	gmpr2 (ENSPREG00000004578)	nedd8 (ENSPREG00000004560)	slc7a8a (ENSPREG00000004530) #37	SVEP1 (ENSPREG00000004460)	ENSPREG00000004397	ENSPREG00000004369
Platyfish	MODERN SPECIES	5	oxa1l (ENSXMAG00000001508) #19	ENSXMAG00000026282	ENSXMAG00000021958	ENSXMAG00000027909	ENSXMAG00000028883	ENSXMAG00000001528	ENSXMAG00000024803	ENSXMAG00000029695	ENSXMAG00000029884	ENSXMAG00000022557	ENSXMAG00000023739	ENSXMAG00000021163	ENSXMAG00000025166	ENSXMAG00000023861	ENSXMAG00000001533 #23	mmp14a (ENSXMAG00000001547) #22	mrpl52 (ENSXMAG00000001578) #21	AJUBA (ENSXMAG00000001581) #27	acin1b (ENSXMAG00000001598) #34	efs (ENSXMAG00000022900)	dhrs4 (ENSXMAG00000028540)	tinf2 (ENSXMAG00000001654)	cideb (ENSXMAG00000026481)	ENSXMAG00000025658	gmpr2 (ENSXMAG00000001666)	nedd8 (ENSXMAG00000028608)	slc7a8a (ENSXMAG00000001695) #37	ENSXMAG00000001729	ENSXMAG00000028802	ENSXMAG00000001739	PTGR1 (ENSXMAG00000001740)
Oryzias	ANCESTRAL SPECIES	29												ENSGT00510000050415.C.j.b.c.c	ENSGT01030000235653	ENSGT00940000163573	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00390000018596.A.a.b	ENSGT00940000176132	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.i.a	ENSGT00940000163988.i.b.a	ENSGT00940000154810.y
Oryzias_b	ANCESTRAL SPECIES	18	ENSGT00390000000592	ENSGT01030000234590.B.a.b	ENSGT00940000176904	ENSGT00550000075058	ENSGT00390000006227	ENSGT00390000002849	ENSGT00940000155384.b.b	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT01100000265004	ENSGT00510000050415.C.i.a.a.h	ENSGT01090000260150	ENSGT00510000050415.C.i.a.a.g	ENSGT00940000167744.a.b	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00390000018596.A.a.b	ENSGT00940000176132	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.i.a	ENSGT00940000154810.y	ENSGT00390000011904
Javanese ricefish	MODERN SPECIES	9	ENSOJAG00000005068	ENSOJAG00000005046	ENSOJAG00000004986	ENSOJAG00000004958	ENSOJAG00000004950	ENSOJAG00000004922	ENSOJAG00000004915	ENSOJAG00000004908	ENSOJAG00000004878	ENSOJAG00000004870	ENSOJAG00000004835	ENSOJAG00000004788	ENSOJAG00000004755	ENSOJAG00000004740	ENSOJAG00000004718 #23	mmp14a (ENSOJAG00000004232) #22	mrpl52 (ENSOJAG00000004164) #21	AJUBA (ENSOJAG00000004126) #27	acin1b (ENSOJAG00000003910) #34	efs (ENSOJAG00000003865)	dhrs4 (ENSOJAG00000003766)	ENSOJAG00000003716	cideb (ENSOJAG00000003689)	ENSOJAG00000003678	ENSOJAG00000003670	gmpr2 (ENSOJAG00000003633)	nedd8 (ENSOJAG00000003576)	ENSOJAG00000003555	slc7a8a (ENSOJAG00000003093) #37	ENSOJAG00000002882	haus3 (ENSOJAG00000002879)
Indian medaka	MODERN SPECIES	19	ENSOMEG00000014285	ENSOMEG00000014296	ENSOMEG00000014314	ENSOMEG00000014363	ENSOMEG00000014394	ENSOMEG00000014404	ENSOMEG00000014439	ENSOMEG00000014459	ENSOMEG00000014492	ENSOMEG00000014531	ENSOMEG00000014562	ENSOMEG00000014575	ENSOMEG00000014594	ENSOMEG00000014689	ENSOMEG00000014804 #23	mmp14a (ENSOMEG00000014869) #22	mrpl52 (ENSOMEG00000014897) #21	ENSOMEG00000014928	AJUBA (ENSOMEG00000001012) #27	acin1b (ENSOMEG00000015053) #34	efs (ENSOMEG00000015081)	dhrs4 (ENSOMEG00000015110)	tinf2 (ENSOMEG00000015132)	cideb (ENSOMEG00000015157)	ENSOMEG00000001028	gmpr2 (ENSOMEG00000015207)	nedd8 (ENSOMEG00000015223)	slc7a8a (ENSOMEG00000015260) #37	SVEP1 (ENSOMEG00000015348)	ENSOMEG00000015373	ENSOMEG00000015437
Oryzias_a	ANCESTRAL SPECIES	33												ENSGT00510000050415.C.j.b.c.c	ENSGT01030000235653	ENSGT00940000163573	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00390000018596.A.a.b	ENSGT00940000176132	ENSGT00940000175229	ENSGT00940000159574	ENSGT00940000165806	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.i.a	ENSGT00940000154810.y
Chinese medaka	MODERN SPECIES	388													ENSOSIG00000005627	ENSOSIG00000005632	ENSOSIG00000005635 #23	mmp14a (ENSOSIG00000005644) #22	mrpl52 (ENSOSIG00000006414) #21	AJUBA (ENSOSIG00000006418) #27	acin1b (ENSOSIG00000006420) #34	efs (ENSOSIG00000006422)	dhrs4 (ENSOSIG00000006425)	ENSOSIG00000006429	cideb (ENSOSIG00000006430)	ENSOSIG00000006432	ENSOSIG00000006433	gmpr2 (ENSOSIG00000006435)	ENSOSIG00000006446	slc7a8a (ENSOSIG00000006503) #37	SVEP1 (ENSOSIG00000007091)	ENSOSIG00000007627	ENSOSIG00000007630
Japanese Medaka HdrR	MODERN SPECIES	9	ENSORLG00000025872	ENSORLG00000030219	ENSORLG00000027384	ENSORLG00000007279	ENSORLG00000027876	ENSORLG00000022625	ENSORLG00000022117	ENSORLG00000024719	ENSORLG00000026465	ENSORLG00000028605	ENSORLG00000007290	ENSORLG00000024264	ENSORLG00000024441	ENSORLG00000024839	ENSORLG00000007300 #23	mmp14a (ENSORLG00000007318) #22	mrpl52 (ENSORLG00000023145) #21	ENSORLG00000023045	ENSORLG00000022045	ajuba (ENSORLG00000007329) #27	acin1b (ENSORLG00000007365) #34	efs (ENSORLG00000029529)	dhrs4 (ENSORLG00000022608)	tinf2 (ENSORLG00000007422)	cideb (ENSORLG00000007438)	ENSORLG00000022635	gmpr2 (ENSORLG00000007456)	ENSORLG00000024017	slc7a8a (ENSORLG00000007494) #37	SVEP1 (ENSORLG00000007547)	ENSORLG00000007575
Ovalentaria_B	ANCESTRAL SPECIES	19	ENSGT00940000176904	ENSGT00550000075058	ENSGT00390000006227	ENSGT00390000002849	ENSGT00940000155384.b.b	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00510000050415.C.j.b.a	ENSGT00940000174852	ENSGT01030000239687	ENSGT00510000050415.C.i.a.a	ENSGT00940000176975	ENSGT00510000050415.C.i.a.b	ENSGT00940000163573	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT01030000235234.b	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT01050000245396	ENSGT00390000018596.A.a.b	ENSGT00940000176132	ENSGT00940000175229	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061
Pomacentridae	ANCESTRAL SPECIES	37												ENSGT00940000177580	ENSGT00510000050415.C.j.a	ENSGT00940000163573	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT01030000235234.b	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00940000176132	ENSGT00390000018596.A.a.b	ENSGT00980000198821	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.i.a
Pomacentridae_A	ANCESTRAL SPECIES	43											ENSGT00940000177580	ENSGT00510000050415.C.j.a	ENSGT00940000163988.i.a.h	ENSGT00940000163573	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00940000176132	ENSGT00390000018596.A.a.b	ENSGT00980000198821	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.i.a.g	ENSGT00940000154810
Amphiprion	ANCESTRAL SPECIES	50											ENSGT00940000177580	ENSGT00510000050415.C.j.a	ENSGT00940000163988.i.a.h	ENSGT00940000163573	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00940000176132	ENSGT00390000018596.A.a.b	ENSGT00980000198821	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.i.a.g	ENSGT00940000154810
Clown anemonefish	MODERN SPECIES	3267												ENSAOCG00000021490	ENSAOCG00000021508	ENSAOCG00000021524	ENSAOCG00000021544 #23	mmp14a (ENSAOCG00000021597) #22	mrpl52 (ENSAOCG00000021608) #21
Orange clownfish	MODERN SPECIES	15	sat2a.2 (ENSAPEG00000006269)	ENSAPEG00000006252	ENSAPEG00000006215	smim20 (ENSAPEG00000006206)	MAN2B2 (ENSAPEG00000006118)	RBPJ (ENSAPEG00000006063)	CCKAR (ENSAPEG00000005946)	tbc1d19 (ENSAPEG00000005880)	STIM2 (ENSAPEG00000005770)	ENSAPEG00000005748	ENSAPEG00000005729	ENSAPEG00000005718	ENSAPEG00000005689	ENSAPEG00000005672	ENSAPEG00000005652 #23	mmp14a (ENSAPEG00000005500) #22	mrpl52 (ENSAPEG00000005483) #21	ENSAPEG00000005430	ENSAPEG00000005295	AJUBA (ENSAPEG00000005258) #27	ENSAPEG00000005134 #34	ENSAPEG00000005111 #34	efs (ENSAPEG00000005099)	dhrs4 (ENSAPEG00000005088)	ENSAPEG00000005050	cideb (ENSAPEG00000005035)	ENSAPEG00000005030	gmpr2 (ENSAPEG00000004994)	nedd8 (ENSAPEG00000004958)	slc7a8a (ENSAPEG00000004897) #37	SVEP1 (ENSAPEG00000004588)
Spiny chromis	MODERN SPECIES	1623														ENSAPOG00000019019	ENSAPOG00000019080 #23	mmp14a (ENSAPOG00000019143) #22	mrpl52 (ENSAPOG00000019164) #21	AJUBA (ENSAPOG00000019211) #27	acin1b (ENSAPOG00000019226) #34	efs (ENSAPOG00000019243)	dhrs4 (ENSAPOG00000019297)	tinf2 (ENSAPOG00000000794)	cideb (ENSAPOG00000019359)
Bicolor damselfish	MODERN SPECIES	544									ENSSPAG00000008222	ENSSPAG00000008239	ENSSPAG00000008254	ENSSPAG00000008262	ENSSPAG00000008272	ENSSPAG00000008298	ENSSPAG00000008348 #23	mmp14a (ENSSPAG00000008404) #22	mrpl52 (ENSSPAG00000008444) #21	ENSSPAG00000008454 #27	acin1b (ENSSPAG00000008478) #34	ENSSPAG00000008500	efs (ENSSPAG00000008509)	dhrs4 (ENSSPAG00000008523)	tinf2 (ENSSPAG00000008548)	cideb (ENSSPAG00000008571)	gmpr2 (ENSSPAG00000008596)	nedd8 (ENSSPAG00000008638)	slc7a8a (ENSSPAG00000008658) #37	SVEP1 (ENSSPAG00000008728)	ENSSPAG00000008951	ptgr1.1 (ENSSPAG00000008961)	haus3 (ENSSPAG00000008978)
Cichlidae	ANCESTRAL SPECIES	20	ENSGT00940000167107	ENSGT01030000234590.B.a.b	ENSGT00940000176904	ENSGT00550000075058	ENSGT00390000006227	ENSGT00390000002849	ENSGT00940000155384.b.b	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00510000050415.C.j.a	ENSGT00940000174573	ENSGT00510000050415.C.j.b.a	ENSGT00940000175830	ENSGT00940000163573	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT01030000235234.b	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT01050000245396	ENSGT00390000018596.A.a.b	ENSGT00940000176132	ENSGT00940000175229	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061
Pseudocrenilabrinae	ANCESTRAL SPECIES	18	ENSGT00940000177580	ENSGT00510000050415.C.j.a	ENSGT00940000174573	ENSGT00940000174852.c.b	ENSGT00510000050415.C.i.a.b.n.b	ENSGT00510000050415.C.i.a.a.b	ENSGT00940000176975.a	ENSGT00980000198800	ENSGT00510000050415.C.i.a.a.a	ENSGT00940000174852.d	ENSGT00940000176975.b	ENSGT00510000050415.C.i.a.b.n.a	ENSGT00510000050415.C.j.b.a.a.b	ENSGT00940000175830	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT01050000245396	ENSGT00390000018596.A.a.b	ENSGT00940000176132	ENSGT00940000175229.k.a	ENSGT00940000175229.k.b	ENSGT00940000163587.a.a	ENSGT00940000175229.l	ENSGT00940000159574	ENSGT00940000155856.cb
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	23	ENSGT00390000006227	ENSGT00390000002849	ENSGT00940000155384.b.b	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00940000177580	ENSGT00510000050415.C.j.a	ENSGT00940000174573	ENSGT00510000050415.C.j.b.a.a.a.b	ENSGT00510000050415.C.j.b.a.a.b	ENSGT01100000265171	ENSGT00510000050415.C.i.a.b.n.a	ENSGT01020000231088	ENSGT00940000175830	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT01050000245396	ENSGT00390000018596.A.a.b	ENSGT00940000176132	ENSGT00940000175229.k.a	ENSGT00940000175229.k.b	ENSGT00940000163587.a.a	ENSGT00940000175229.l	ENSGT00940000159574	ENSGT00940000155856.cb
Haplochromini	ANCESTRAL SPECIES	44						ENSGT00980000198800.a.b	ENSGT00510000050415.C.i.a.a.a.a	ENSGT00940000174852.d	ENSGT00940000176975.b	ENSGT00510000050415.C.i.a.b.n.a.a.b	ENSGT01020000231088.b	ENSGT00510000050415.C.i.a.b.n.a.b	ENSGT01020000231088.a	ENSGT00940000175830	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT01050000245396	ENSGT00390000018596.A.a.b	ENSGT00940000176132	ENSGT00940000175229.k.a	ENSGT00940000175229.k.b	ENSGT00940000163587.a.a	ENSGT00940000175229.l	ENSGT00940000159574	ENSGT00940000155856.cb
Burton s mouthbrooder	MODERN SPECIES	965											ENSHBUG00000020086	ENSHBUG00000000597	ENSHBUG00000020106	ENSHBUG00000020116	ENSHBUG00000020124 #23	mmp14a (ENSHBUG00000020157) #22	mrpl52 (ENSHBUG00000000610) #21	AJUBA (ENSHBUG00000020192) #27	acin1b (ENSHBUG00000020274) #34	efs (ENSHBUG00000020283)	dhrs4 (ENSHBUG00000020314)	tinf2 (ENSHBUG00000000619)	ENSHBUG00000020338	cideb (ENSHBUG00000020349)
Haplochromini_A	ANCESTRAL SPECIES	47													ENSGT00510000050415.C.i.a.b.n.a.b	ENSGT00940000175830	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT01050000245396	ENSGT00390000018596.A.a.b	ENSGT00940000176132	ENSGT00940000175229.k.a	ENSGT00940000175229.k.b	ENSGT00940000163587.a.a	ENSGT00940000175229.l	ENSGT00940000159574	ENSGT00940000155856.cb
P. nyererei	MODERN SPECIES	570														ENSPNYG00000005453	ENSPNYG00000005437 #23	mmp14a (ENSPNYG00000005387) #22	mrpl52 (ENSPNYG00000005363) #21	AJUBA (ENSPNYG00000005341) #27	acin1b (ENSPNYG00000005309) #34	efs (ENSPNYG00000005242)	dhrs4 (ENSPNYG00000005221)	ENSPNYG00000005203	ENSPNYG00000005187	cideb (ENSPNYG00000005148)	ENSPNYG00000005110	nedd8 (ENSPNYG00000005087)	slc7a8a (ENSPNYG00000004984) #37	SVEP1 (ENSPNYG00000004870)	ENSPNYG00000004842	ENSPNYG00000004819	ENSPNYG00000004805
Haplochromini_B	ANCESTRAL SPECIES	25	ENSGT00950000183121.a.c.b.r.a.a.b	ENSGT00510000050415.C.i.a.b.n.b.b	ENSGT00510000050415.C.i.a.a.b.a	ENSGT00940000176975.a.a.a	ENSGT00940000176975.a.a.b	ENSGT00980000198800.a.a	ENSGT00510000050415.C.i.a.a.a.a.b	ENSGT00940000174852.d	ENSGT00940000176975.b	ENSGT00510000050415.C.i.a.b.n.a.b	ENSGT00940000162700.e.a.a.b.a.a.d.c.a.a	ENSGT00940000163711.a.a.b.v.a.a.b	ENSGT01020000230664.b.a.a.a	ENSGT00940000175830	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00390000018596.A.a.b	ENSGT00940000176132
Eastern happy	MODERN SPECIES	15	ENSACLG00000010692	ENSACLG00000010696	ENSACLG00000010702	ENSACLG00000010708	ENSACLG00000010721	ENSACLG00000010728	ENSACLG00000010769	ENSACLG00000010802	ENSACLG00000010808	ENSACLG00000010821	ENSACLG00000010865	ENSACLG00000010879	ENSACLG00000010892	ENSACLG00000010971	ENSACLG00000010986 #23	mmp14a (ENSACLG00000011022) #22	mrpl52 (ENSACLG00000011063) #21	AJUBA (ENSACLG00000011074) #27	acin1b (ENSACLG00000011103) #34	efs (ENSACLG00000011128)	dhrs4 (ENSACLG00000011161)	tinf2 (ENSACLG00000011172)	cideb (ENSACLG00000011189)	ENSACLG00000011204	ENSACLG00000011209	ENSACLG00000011217	ENSACLG00000011221	ENSACLG00000011229	ENSACLG00000011557	ENSACLG00000011565	ENSACLG00000011573
Zebra mbuna	MODERN SPECIES	1106	CLCN3 (ENSMZEG00005020887)	mfap3l (ENSMZEG00005020899)	AADAT (ENSMZEG00005020901)	intu (ENSMZEG00005020907)	ino80b (ENSMZEG00005020912)	ENSMZEG00005020914	ENSMZEG00005020916	trmt10b (ENSMZEG00005020927)	cxcl19 (ENSMZEG00005020929)	ENSMZEG00005020931	ENSMZEG00005020932	ENSMZEG00005020936	ENSMZEG00005020940	ENSMZEG00005020943	ENSMZEG00005020945 #23	mmp14a (ENSMZEG00005020950) #22	mrpl52 (ENSMZEG00005020953) #21	AJUBA (ENSMZEG00005020956) #27	ENSMZEG00005020960 #34	ENSMZEG00005020962 #34	efs (ENSMZEG00005020965)	dhrs4 (ENSMZEG00005020967)	tinf2 (ENSMZEG00005020970)	cideb (ENSMZEG00005020973)	ENSMZEG00005020977	GBA2 (ENSMZEG00005020979)	rgp1 (ENSMZEG00005020987)	MSMP (ENSMZEG00005020991)	pik3c3 (ENSMZEG00005020994)	TESK1 (ENSMZEG00005020999)	faah2b (ENSMZEG00005021002)
Lyretail cichlid	MODERN SPECIES	582											ENSNBRG00000023388	ENSNBRG00000023396	ENSNBRG00000023399	ENSNBRG00000023409	ENSNBRG00000023412 #23	mmp14a (ENSNBRG00000023417) #22	mrpl52 (ENSNBRG00000023422) #21	AJUBA (ENSNBRG00000023426) #27	acin1b (ENSNBRG00000023432) #34	ENSNBRG00000023440 #34	efs (ENSNBRG00000023443)	dhrs4 (ENSNBRG00000023446)	tinf2 (ENSNBRG00000023450)	cideb (ENSNBRG00000023454)	ENSNBRG00000023457
Nile tilapia	MODERN SPECIES	15	ENSONIG00000028127	ENSONIG00000030519	ENSONIG00000040426	ENSONIG00000038281	ENSONIG00000009363	ENSONIG00000028367	ENSONIG00000034438	ENSONIG00000028447	ENSONIG00000007150	ENSONIG00000032532	ENSONIG00000029081	ENSONIG00000028736	ENSONIG00000029347	ENSONIG00000042692	ENSONIG00000017944 #23	mmp14a (ENSONIG00000017945) #22	mrpl52 (ENSONIG00000017950) #21	AJUBA (ENSONIG00000017951) #27	acin1b (ENSONIG00000017952) #34	efs (ENSONIG00000037917)	dhrs4 (ENSONIG00000038358)	tinf2 (ENSONIG00000037719)	cideb (ENSONIG00000017960)	ENSONIG00000033513	ENSONIG00000033454	ENSONIG00000037239	gmpr2 (ENSONIG00000042292)	ENSONIG00000031021	nedd8 (ENSONIG00000028488)	slc7a8a (ENSONIG00000012881) #37	SVEP1 (ENSONIG00000012887)
Midas cichlid	MODERN SPECIES	1176														ENSACIG00000006114	ENSACIG00000006133 #23	mmp14a (ENSACIG00000006147) #22	mrpl52 (ENSACIG00000006164) #21	AJUBA (ENSACIG00000006180) #27	acin1b (ENSACIG00000006212) #34	ENSACIG00000006242	efs (ENSACIG00000006255)	dhrs4 (ENSACIG00000006304)	tinf2 (ENSACIG00000006319)	cideb (ENSACIG00000006344)
Percomorphaceae_C	ANCESTRAL SPECIES	20	ENSGT00390000002849	ENSGT00940000155384.b.b	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00940000174852	ENSGT00940000176975	ENSGT00510000050415.C.i.a.a	ENSGT00510000050415.C.j.b	ENSGT01090000260150	ENSGT00940000172369	ENSGT00510000050415.C.i.a.b	ENSGT00940000177580	ENSGT00510000050415.C.j.a	ENSGT00940000163573	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00940000176132	ENSGT01050000245396	ENSGT00390000018596.A.a.b	ENSGT00940000175229	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.i.b.a
Eupercaria	ANCESTRAL SPECIES	19	ENSGT00550000075058	ENSGT00390000006227	ENSGT00390000002849	ENSGT00940000155384.b.b	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00940000174852	ENSGT01090000260150	ENSGT00510000050415.C.i.a.a	ENSGT00940000176975	ENSGT00510000050415.C.i.a.b	ENSGT00940000177580	ENSGT00510000050415.C.j.a	ENSGT00940000163573	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00940000176132	ENSGT01050000245396	ENSGT00390000018596.A.a.b	ENSGT00940000175229	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.i.a
Tetraodontidae	ANCESTRAL SPECIES	70															ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT01050000245396	ENSGT00390000018596.A.a.b.f	ENSGT00940000159574	ENSGT00940000165806	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.j	ENSGT00940000163988.i.a	ENSGT00940000154810	ENSGT00390000011904	ENSGT00940000159015
Tetraodon	DUPLICATION
Tetraodon	MODERN SPECIES	26	hspa12b (ENSTNIG00000000451)	cct7 (ENSTNIG00000013824)	rcor2 (ENSTNIG00000013825)	MARK2 (ENSTNIG00000013826)	krcp (ENSTNIG00000013827)	naa40 (ENSTNIG00000013828)	b3gat3 (ENSTNIG00000013829)	arl2 (ENSTNIG00000013830)	PPP2R5B (ENSTNIG00000013831)	ENSTNIG00000013832	gpha2 (ENSTNIG00000013833)	zgc:101765 (ENSTNIG00000013834)	badb (ENSTNIG00000013835)	ENSTNIG00000013836	LRP10 (ENSTNIG00000013837) #23	mmp14a (ENSTNIG00000013838) #22	mrpl52 (ENSTNIG00000013839) #21	AJUBA (ENSTNIG00000013840) #27	acin1b (ENSTNIG00000013841) #34	efs (ENSTNIG00000013842)	dhrs4 (ENSTNIG00000013843)	CIDEB (ENSTNIG00000013844)	gmpr2 (ENSTNIG00000013845)	nedd8 (ENSTNIG00000013846)	slc7a8a (ENSTNIG00000013847) #37	dhrs4 (ENSTNIG00000013848)	cideb (ENSTNIG00000013849)	gmpr2 (ENSTNIG00000013850)	nedd8 (ENSTNIG00000000181)	ENSTNIG00000013851	ENSTNIG00000013852
Tetraodon	MODERN SPECIES	26	ENSTNIG00000001911	pgk1 (ENSTNIG00000001910)	ENSTNIG00000001011	tph2 (ENSTNIG00000001493)	ENSTNIG00000001908	ENSTNIG00000001907	ENSTNIG00000001906	ENSTNIG00000001904	ENSTNIG00000001903	ENSTNIG00000001902	SOX9 (ENSTNIG00000001901)	ENSTNIG00000001900	lrrc59 (ENSTNIG00000000837)	ENSTNIG00000000408	ENSTNIG00000001899	MMP14 (ENSTNIG00000001898) #22	vmp1 (ENSTNIG00000001897)	ulk3 (ENSTNIG00000011929)	ENSTNIG00000001895	pex16 (ENSTNIG00000001894)	ENSTNIG00000001893	TSPAN18 (ENSTNIG00000001891)	LRAT (ENSTNIG00000001890)	lratb.2 (ENSTNIG00000001889)	fga (ENSTNIG00000001888)	ENSTNIG00000002170	dtd2 (ENSTNIG00000000437)	ENSTNIG00000000066	ENSTNIG00000001885	ENSTNIG00000001884	ENSTNIG00000001874
Fugu	MODERN SPECIES	20	krcp (ENSTRUG00000003850)	MARK2 (ENSTRUG00000029011)	rcor2 (ENSTRUG00000004706)	naa40 (ENSTRUG00000004932)	b3gat3 (ENSTRUG00000005136)	ENSTRUG00000005398	arl2 (ENSTRUG00000005435)	ENSTRUG00000025866	PPP2R5B (ENSTRUG00000005676)	ENSTRUG00000006507	gpha2 (ENSTRUG00000006535)	badb (ENSTRUG00000028528)	ENSTRUG00000006626	ENSTRUG00000027671	ENSTRUG00000024306 #23	mmp14a (ENSTRUG00000008020) #22	mrpl52 (ENSTRUG00000027145) #21	AJUBA (ENSTRUG00000033491) #27	acin1b (ENSTRUG00000008622) #34	efs (ENSTRUG00000008854)	ENSTRUG00000028609	cideb (ENSTRUG00000001434)	ENSTRUG00000022143	gmpr2 (ENSTRUG00000001414)	ENSTRUG00000001671	slc7a8a (ENSTRUG00000025992) #37	SVEP1 (ENSTRUG00000002627)	ENSTRUG00000023298	ENSTRUG00000004064	ptgr1.1 (ENSTRUG00000004223)	haus3 (ENSTRUG00000004493)
Eupecaria_A	ANCESTRAL SPECIES	20	ENSGT00390000006227	ENSGT00390000002849	ENSGT00940000155384.b.b	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00940000174852	ENSGT01090000260150	ENSGT00510000050415.C.i.a.a	ENSGT00940000176975	ENSGT00940000172369	ENSGT00510000050415.C.i.a.b	ENSGT00940000177580.c.a	ENSGT00510000050415.C.j.a	ENSGT00940000163573	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00940000176132	ENSGT01050000245396	ENSGT00390000018596.A.a.b	ENSGT00940000175229	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.i.a
Ballan wrasse	MODERN SPECIES	144											ENSLBEG00000001938	ENSLBEG00000001912	ENSLBEG00000001836	ENSLBEG00000001743	ENSLBEG00000001726 #23	mmp14a (ENSLBEG00000001654) #22	mrpl52 (ENSLBEG00000001625) #21	AJUBA (ENSLBEG00000001589) #27	ENSLBEG00000001494 #34	efs (ENSLBEG00000001476)	dhrs4 (ENSLBEG00000001429)	tinf2 (ENSLBEG00000001418)	cideb (ENSLBEG00000001360)	ENSLBEG00000001346	ENSLBEG00000001332	ENSLBEG00000001318	gmpr2 (ENSLBEG00000001297)	ENSLBEG00000001271	slc7a8a (ENSLBEG00000001226) #37	SVEP1 (ENSLBEG00000001069)	ENSLBEG00000000805
Eupecaria_B	ANCESTRAL SPECIES	20	ENSGT00940000167107	ENSGT00940000175475	ENSGT01030000234590.B.a.b	ENSGT00550000075058	ENSGT00390000006227	ENSGT00390000002849	ENSGT00940000155384.b.b	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00940000174852	ENSGT01090000260150	ENSGT00510000050415.C.i.a.a	ENSGT00940000176975	ENSGT00510000050415.C.i.a.b	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00940000176132	ENSGT01050000245396	ENSGT00390000018596.A.a.b	ENSGT00940000175229	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.i.a
Eupecaria_C	ANCESTRAL SPECIES	20	ENSGT00940000167107	ENSGT00940000175475	ENSGT01030000234590.B.a.b	ENSGT00550000075058	ENSGT00390000006227	ENSGT00390000002849	ENSGT00940000155384.b.b	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00940000174852	ENSGT01090000260150	ENSGT00510000050415.C.i.a.a	ENSGT00940000176975.e	ENSGT00940000163573	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00390000018596.A.a.b	ENSGT00940000176132	ENSGT00940000163587.a.a	ENSGT00940000175229	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.i.a
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	19	ENSGT00390000000592	ENSGT00940000167107	ENSGT00940000175475	ENSGT01030000234590.B.a.b	ENSGT00550000075058	ENSGT00390000006227	ENSGT00390000002849	ENSGT00940000155384.b.b	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00940000174852	ENSGT00510000050415.C.i.a.b.d	ENSGT00990000205295	ENSGT00940000163573	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00390000018596.A.a.b	ENSGT00940000176132	ENSGT00940000175229	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.i.a	ENSGT00940000154810
Large yellow croaker	MODERN SPECIES		TBC1D9B (ENSLCRG00005001740)	tgfbi (ENSLCRG00005004287)	ENSLCRG00005004364	sqstm1 (ENSLCRG00005004369)	rnf4 (ENSLCRG00005004374)	selenot2 (ENSLCRG00005004380)	ENSLCRG00005004384	COX18 (ENSLCRG00005004385) ##19	igfbp7 (ENSLCRG00005004387)	ENSLCRG00005004400	polr2b (ENSLCRG00005004411)	ENSLCRG00005004479	cyp7a1 (ENSLCRG00005004480)	TMEM70 (ENSLCRG00005004494)	ENSLCRG00005004515	mmp14a (ENSLCRG00005004907) #22	mrpl52 (ENSLCRG00005005446) #21	AJUBA (ENSLCRG00005005449) #27	acin1b (ENSLCRG00005005455) #34	efs (ENSLCRG00005005546)	dhrs4 (ENSLCRG00005005550)	ENSLCRG00005005604	cideb (ENSLCRG00005005607)	ENSLCRG00005005627	ENSLCRG00005005629	ENSLCRG00005005632	gmpr2 (ENSLCRG00005005638)	nedd8 (ENSLCRG00005005661)	slc7a8a (ENSLCRG00005005700) #37	SVEP1 (ENSLCRG00005005806)	ENSLCRG00005006137
European seabass	MODERN SPECIES	16	ENSDLAG00005006675	ENSDLAG00005027744	ENSDLAG00005028857	ENSDLAG00005005331	ENSDLAG00005021740	ENSDLAG00005034325	ENSDLAG00005027924	ENSDLAG00005006713	ENSDLAG00005002756	ENSDLAG00005006683	ENSDLAG00005006689	ENSDLAG00005006699	ENSDLAG00005027501	ENSDLAG00005002774	ENSDLAG00005006730 #23	mmp14a (ENSDLAG00005006759) #22	mrpl52 (ENSDLAG00005006866) #21	ENSDLAG00005033005	ENSDLAG00005033636 #27	acin1b (ENSDLAG00005006915) #34	efs (ENSDLAG00005006936)	dhrs4 (ENSDLAG00005006949)	tinf2 (ENSDLAG00005006983)	cideb (ENSDLAG00005007018)	ENSDLAG00005032593	ENSDLAG00005030931	gmpr2 (ENSDLAG00005027754)	ENSDLAG00005007061	ENSDLAG00005030665	ENSDLAG00005032666	nedd8 (ENSDLAG00005007155)
Gilthead seabream	MODERN SPECIES	1	ENSSAUG00010008607	ENSSAUG00010008604	ENSSAUG00010008589	ENSSAUG00010008588	ENSSAUG00010008584	ENSSAUG00010008573	ENSSAUG00010008568	ENSSAUG00010008559	ENSSAUG00010008557	ENSSAUG00010008555	ENSSAUG00010008551	ENSSAUG00010008549	ENSSAUG00010008547	ENSSAUG00010008532	ENSSAUG00010008523 #23	mmp14a (ENSSAUG00010007593) #22	mrpl52 (ENSSAUG00010007572) #21	AJUBA (ENSSAUG00010007570) #27	acin1b (ENSSAUG00010007564) #34	efs (ENSSAUG00010007559)	dhrs4 (ENSSAUG00010007558)	tinf2 (ENSSAUG00010007546)	cideb (ENSSAUG00010007545)	ENSSAUG00010007543	ENSSAUG00010007541	ENSSAUG00010007540	ENSSAUG00010007537	ENSSAUG00010007535	gmpr2 (ENSSAUG00010007480)	nedd8 (ENSSAUG00010007476)	slc7a8a (ENSSAUG00010007344) #37
Perciformes	ANCESTRAL SPECIES	19	ENSGT00390000000592	ENSGT00940000167107	ENSGT00940000175475	ENSGT01030000234590.B.a.b	ENSGT00550000075058	ENSGT00390000006227	ENSGT00390000002849	ENSGT00940000155384.b.b	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00940000174852	ENSGT00940000176975	ENSGT00510000050415.C.i.a.a	ENSGT00510000050415.C.i.a.b	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00390000018596.A.a.b	ENSGT00940000176132	ENSGT00940000175229	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.i.a	ENSGT00940000154810
Perciformes_a	ANCESTRAL SPECIES	18	ENSGT00940000167107	ENSGT00940000175475	ENSGT01030000234590.B.a.b	ENSGT00550000075058	ENSGT00390000006227	ENSGT00390000002849	ENSGT00940000155384.b.b	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00940000174852	ENSGT01030000239687	ENSGT00940000176975	ENSGT00510000050415.C.i.a.a	ENSGT00510000050415.C.i.a.b	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00390000018596.A.a.b	ENSGT00940000176132	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.i.a	ENSGT00940000154810	ENSGT00390000011904
Channel bull blenny	MODERN SPECIES	9	fis1 (ENSCGOG00000011377)	zgc:103586 (ENSCGOG00000011388)	tm4sf5 (ENSCGOG00000011390)	mettl3 (ENSCGOG00000011414)	ttc5 (ENSCGOG00000011444)	CCNB1IP1 (ENSCGOG00000011486)	ENSCGOG00000011488	slc7a7 (ENSCGOG00000011493) #20	oxa1l (ENSCGOG00000011662) #19	ENSCGOG00000011749	ENSCGOG00000011753	ENSCGOG00000011758	ENSCGOG00000011760	ENSCGOG00000011762	ENSCGOG00000011499 #23	mmp14a (ENSCGOG00000011530) #22	mrpl52 (ENSCGOG00000012471) #21	AJUBA (ENSCGOG00000012473) #27	acin1b (ENSCGOG00000012482) #34	efs (ENSCGOG00000012492)	dhrs4 (ENSCGOG00000012499)	tinf2 (ENSCGOG00000012518)	cideb (ENSCGOG00000012520)	gmpr2 (ENSCGOG00000012523)	nedd8 (ENSCGOG00000012538)	slc7a8a (ENSCGOG00000012584) #37	SVEP1 (ENSCGOG00000013140)	ENSCGOG00000013367	PTGR1 (ENSCGOG00000013370)	ENSCGOG00000013371	SVEP1 (ENSCGOG00000013378)
Pike perch	MODERN SPECIES	81	fis1 (ENSSLUG00000018672)	zgc:103586 (ENSSLUG00000018661)	ENSSLUG00000018650	tm4sf5 (ENSSLUG00000018644)	mettl3 (ENSSLUG00000018627)	ttc5 (ENSSLUG00000018610)	CCNB1IP1 (ENSSLUG00000018605)	ENSSLUG00000018599	slc7a7 (ENSSLUG00000018458) #20	oxa1l (ENSSLUG00000018429) #19	ENSSLUG00000018422	ENSSLUG00000018419	ENSSLUG00000018414	ENSSLUG00000018410	ENSSLUG00000018407 #23	mmp14a (ENSSLUG00000018215) #22	mrpl52 (ENSSLUG00000018198) #21	ENSSLUG00000018183 #27	acin1b (ENSSLUG00000018128) #34	efs (ENSSLUG00000018122)	dhrs4 (ENSSLUG00000018109)	ENSSLUG00000018104	cideb (ENSSLUG00000018101)	ENSSLUG00000018096	gmpr2 (ENSSLUG00000018033)	nedd8 (ENSSLUG00000018001)	slc7a8a (ENSSLUG00000017873) #37	SVEP1 (ENSSLUG00000017772)	ENSSLUG00000017758	ptgr1.1 (ENSSLUG00000017743)	haus3 (ENSSLUG00000017736)
Cottioidei	ANCESTRAL SPECIES	20	ENSGT00390000000592	ENSGT00940000167107	ENSGT01030000234590.B.a.b	ENSGT00550000075058	ENSGT00390000006227	ENSGT00390000002849	ENSGT00940000155384.b.b	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00940000174852	ENSGT00940000176975	ENSGT00510000050415.C.i.a.a	ENSGT01010000227968	ENSGT00940000172369	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00390000018596.A.a.b	ENSGT00940000175229	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.i.a	ENSGT00940000154810	ENSGT00390000011904
Lumpfish	MODERN SPECIES	9	mettl3 (ENSCLMG00005007346)	ttc5 (ENSCLMG00005007344)	CCNB1IP1 (ENSCLMG00005007343)	ENSCLMG00005007340	slc7a7 (ENSCLMG00005007338) #20	oxa1l (ENSCLMG00005007335) #19	ENSCLMG00005007333	ENSCLMG00005007330	ENSCLMG00005007328	ENSCLMG00005007327	ENSCLMG00005007326	ENSCLMG00005007324	ENSCLMG00005007320	ENSCLMG00005007317	ENSCLMG00005007315 #23	mmp14a (ENSCLMG00005007043) #22	mrpl52 (ENSCLMG00005007042) #21	AJUBA (ENSCLMG00005007040) #27	acin1b (ENSCLMG00005007037) #34	efs (ENSCLMG00005007035)	dhrs4 (ENSCLMG00005007010)	tinf2 (ENSCLMG00005007009)	cideb (ENSCLMG00005007007)	ENSCLMG00005007006	gmpr2 (ENSCLMG00005006979)	nedd8 (ENSCLMG00005006975)	slc7a8a (ENSCLMG00005006963) #37	SVEP1 (ENSCLMG00005006900)	ENSCLMG00005006893	ptgr1.1 (ENSCLMG00005006891)	haus3 (ENSCLMG00005006890)
Stickleback	MODERN SPECIES	7	naa38 (ENSGACG00000019273)	dnajc3b (ENSGACG00000019265)	cldn15a (ENSGACG00000019261)	fis1 (ENSGACG00000019258)	zgc:103586 (ENSGACG00000019255)	tm4sf5 (ENSGACG00000019250)	mettl3 (ENSGACG00000019244)	ttc5 (ENSGACG00000019234)	CCNB1IP1 (ENSGACG00000019232)	slc7a7 (ENSGACG00000019213) #20	oxa1l (ENSGACG00000019211) #19	ENSGACG00000019210	ENSGACG00000019205	ENSGACG00000019203	ENSGACG00000019201 #23	mmp14a (ENSGACG00000019199) #22	mrpl52 (ENSGACG00000019198) #21	ENSGACG00000019197	ENSGACG00000019196 #34	efs (ENSGACG00000019194)	dhrs4 (ENSGACG00000019180)	ENSGACG00000019179	ENSGACG00000019178	cideb (ENSGACG00000019177)	gmpr2 (ENSGACG00000019167)	ENSGACG00000019166	slc7a8a (ENSGACG00000019161) #37	SVEP1 (ENSGACG00000019152)	ENSGACG00000019142	ENSGACG00000019138	haus3 (ENSGACG00000019137)
Percomorphaceae_D	ANCESTRAL SPECIES	20	ENSGT00940000155384.b.b	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00940000174852	ENSGT00940000176975	ENSGT00510000050415.C.i.a.a	ENSGT00510000050415.C.j.b	ENSGT01090000260150	ENSGT01020000231088	ENSGT00940000172369	ENSGT00510000050415.C.i.a.b	ENSGT00940000177580	ENSGT00510000050415.C.j.a	ENSGT00940000163573	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00390000018596.A.a.b	ENSGT00940000176132	ENSGT00940000175229	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.i.b.a	ENSGT00940000163988.i.a
Carangaria	ANCESTRAL SPECIES	20	ENSGT00390000002849	ENSGT00940000155384.b.b	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00940000174852	ENSGT00940000176975	ENSGT01090000260150	ENSGT00510000050415.C.i.a.a	ENSGT00510000050415.C.j.b	ENSGT01020000231088	ENSGT00940000172369	ENSGT00940000168139	ENSGT00510000050415.C.i.a.b	ENSGT00940000163573	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00390000018596.A.a.b	ENSGT00940000176132	ENSGT00940000175229	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.i.b.a	ENSGT00940000163988.i.a
Pleuronectoidei	ANCESTRAL SPECIES	17	ENSGT01030000234590.B.a.b	ENSGT00940000176904	ENSGT00550000075058	ENSGT00390000006227	ENSGT00390000002849	ENSGT00940000155384.b.b	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT01090000260150	ENSGT00510000050415.C.i.a.a	ENSGT00940000174852	ENSGT00940000168139	ENSGT00510000050415.C.i.a.b	ENSGT00940000163573	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00390000018596.A.a.b	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.i.a	ENSGT00940000154810	ENSGT00390000011904	ENSGT00940000159015
Turbot	MODERN SPECIES	11	fis1 (ENSSMAG00000006342)	ENSSMAG00000006327	ENSSMAG00000006289	ttc5 (ENSSMAG00000006280)	ENSSMAG00000023729	ENSSMAG00000006268	ENSSMAG00000006241	slc7a7 (ENSSMAG00000006212) #20	oxa1l (ENSSMAG00000006191) #19	ENSSMAG00000006091	ENSSMAG00000006076	ENSSMAG00000006042	ENSSMAG00000032738	ENSSMAG00000006034	ENSSMAG00000005966 #23	mmp14a (ENSSMAG00000005945) #22	mrpl52 (ENSSMAG00000037134) #21	ENSSMAG00000005913 #27	acin1b (ENSSMAG00000005897) #34	efs (ENSSMAG00000005866)	dhrs4 (ENSSMAG00000005811)	ENSSMAG00000005775	cideb (ENSSMAG00000005751)	gmpr2 (ENSSMAG00000005728)	nedd8 (ENSSMAG00000005716)	slc7a8a (ENSSMAG00000005686) #37	ENSSMAG00000005472	ENSSMAG00000007004	ENSSMAG00000005445	ENSSMAG00000035511	ENSSMAG00000032837
Tongue sole	MODERN SPECIES		tm4sf5 (ENSCSEG00000004451)	si:dkey-85k7.7 (ENSCSEG00000004446)	mettl3 (ENSCSEG00000004439)	ttc5 (ENSCSEG00000004435)	CCNB1IP1 (ENSCSEG00000004429)	ENSCSEG00000004426	slc7a7 (ENSCSEG00000004419) #20	oxa1l (ENSCSEG00000004416) #19	ENSCSEG00000004413	ENSCSEG00000004410	ENSCSEG00000004407	ENSCSEG00000004397	ENSCSEG00000004393	ENSCSEG00000004391	ENSCSEG00000004387 #23	mmp14a (ENSCSEG00000004380) #22	mrpl52 (ENSCSEG00000004375) #21	AJUBA (ENSCSEG00000004370) #27	acin1b (ENSCSEG00000004364) #34	efs (ENSCSEG00000004361)	nat8l (ENSCSEG00000004359)	poln (ENSCSEG00000004352)	haus3 (ENSCSEG00000004345)	ptgr1.1 (ENSCSEG00000004321)	txn (ENSCSEG00000004313)	ENSCSEG00000004306	SVEP1 (ENSCSEG00000004223)	slc7a8a (ENSCSEG00000004201) #37	ENSCSEG00000004198	ENSCSEG00000004195	ENSCSEG00000004184
Carangaria_A	ANCESTRAL SPECIES	26	ENSGT00390000002849	ENSGT00940000155384.b.b	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00940000174852	ENSGT00940000176975	ENSGT00510000050415.C.i.a.a	ENSGT00510000050415.C.j.b	ENSGT01090000260150	ENSGT01020000231088	ENSGT00940000172369	ENSGT00510000050415.C.i.a.b	ENSGT00940000177580	ENSGT00510000050415.C.j.a	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00390000018596.A.a.b	ENSGT00940000176132	ENSGT00940000175229	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.i.b.a	ENSGT00940000163988.i.a
Seriola	ANCESTRAL SPECIES	24	ENSGT00390000006227	ENSGT00390000002849	ENSGT00940000155384.b.b	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00940000174852	ENSGT01090000260150	ENSGT00510000050415.C.i.a.a	ENSGT00510000050415.C.j.b.h.a	ENSGT01020000231088	ENSGT00510000050415.C.i.a.b	ENSGT00940000177580	ENSGT00510000050415.C.j.a	ENSGT00510000050415.C.j.b.g	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00390000018596.A.a.b	ENSGT00940000176132	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.i.a	ENSGT00940000154810	ENSGT00390000011904
Greater amberjack	MODERN SPECIES	153	mettl3 (ENSSDUG00000006091)	ttc5 (ENSSDUG00000006134)	CCNB1IP1 (ENSSDUG00000006153)	ENSSDUG00000006164	slc7a7 (ENSSDUG00000006176) #20	oxa1l (ENSSDUG00000006199) #19	ENSSDUG00000006216	ENSSDUG00000006241	ENSSDUG00000006262	ENSSDUG00000006279	ENSSDUG00000006299	ENSSDUG00000006319	ENSSDUG00000006327	ENSSDUG00000006334	ENSSDUG00000006345 #23	mmp14a (ENSSDUG00000006377) #22	mrpl52 (ENSSDUG00000006399) #21	AJUBA (ENSSDUG00000006410) #27	acin1b (ENSSDUG00000006437) #34	efs (ENSSDUG00000006502)	dhrs4 (ENSSDUG00000006513)	tinf2 (ENSSDUG00000006532)	cideb (ENSSDUG00000006573)	ENSSDUG00000006604	ENSSDUG00000006608	gmpr2 (ENSSDUG00000006616)	nedd8 (ENSSDUG00000006639)	slc7a8a (ENSSDUG00000006665) #37	SVEP1 (ENSSDUG00000006724)	ENSSDUG00000006970	ptgr1.1 (ENSSDUG00000006999)
Yellowtail amberjack	MODERN SPECIES	3268	si:dkey-85k7.7 (ENSSLDG00000003292)	ttc5 (ENSSLDG00000003320)	CCNB1IP1 (ENSSLDG00000003337)	ENSSLDG00000003393	slc7a7 (ENSSLDG00000003440) #20	oxa1l (ENSSLDG00000003497) #19	ENSSLDG00000003517	ENSSLDG00000003535	ENSSLDG00000003565	ENSSLDG00000003602	ENSSLDG00000003650	ENSSLDG00000003708	ENSSLDG00000003744	ENSSLDG00000003783	ENSSLDG00000003863 #23	mmp14a (ENSSLDG00000003936) #22	mrpl52 (ENSSLDG00000004016) #21	AJUBA (ENSSLDG00000004032) #27	ENSSLDG00000004087 #34	ENSSLDG00000004163 #34	efs (ENSSLDG00000004177)	dhrs4 (ENSSLDG00000004198)	tinf2 (ENSSLDG00000004240)	cideb (ENSSLDG00000004293)	ENSSLDG00000004350	ENSSLDG00000004356	gmpr2 (ENSSLDG00000004382)	nedd8 (ENSSLDG00000004440)	slc7a8a (ENSSLDG00000004477) #37	SVEP1 (ENSSLDG00000004558)	ENSSLDG00000004877
Barramundi perch	MODERN SPECIES	505															ENSLCAG00010027309 #23	mmp14a (ENSLCAG00010000187) #22	mrpl52 (ENSLCAG00010000199) #21	AJUBA (ENSLCAG00010000204) #27	acin1b (ENSLCAG00010000222) #34	efs (ENSLCAG00010000234)	dhrs4 (ENSLCAG00010000269)	ENSLCAG00010000304	cideb (ENSLCAG00010000308)	ENSLCAG00010000313	ENSLCAG00010000317	gmpr2 (ENSLCAG00010000323)	nedd8 (ENSLCAG00010000384)	slc7a8a (ENSLCAG00010000450) #37	SVEP1 (ENSLCAG00010000564)	ENSLCAG00010000752	ENSLCAG00010000756
Anabantaria	ANCESTRAL SPECIES	19	ENSGT01030000234590.B.a.b	ENSGT00550000075058	ENSGT00390000006227	ENSGT00390000002849	ENSGT00940000155384.b.b	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00940000174852	ENSGT00940000176975	ENSGT00510000050415.C.i.a.a	ENSGT00510000050415.C.j.b	ENSGT01020000231088	ENSGT00940000172369	ENSGT00510000050415.C.i.a.b	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00390000018596.A.a.b	ENSGT00940000176132	ENSGT00940000175229	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.i.b.a	ENSGT00940000163988.i.a
Zig-zag eel	MODERN SPECIES	9	ENSMAMG00000015992	ENSMAMG00000015933	ttc5 (ENSMAMG00000015917)	ENSMAMG00000015901	ENSMAMG00000015879	slc7a7 (ENSMAMG00000015857) #20	oxa1l (ENSMAMG00000015852) #19	ENSMAMG00000015842	ENSMAMG00000015827	ENSMAMG00000027548	ENSMAMG00000015780	ENSMAMG00000015761	ENSMAMG00000015753	ENSMAMG00000026752	ENSMAMG00000015739 #23	mmp14a (ENSMAMG00000015702) #22	mrpl52 (ENSMAMG00000015697) #21	ENSMAMG00000015677 #27	acin1b (ENSMAMG00000015673) #34	efs (ENSMAMG00000015662)	dhrs4 (ENSMAMG00000015620)	nat8l (ENSMAMG00000015605)	poln (ENSMAMG00000015566)	haus3 (ENSMAMG00000015558)	ptgr1.1 (ENSMAMG00000015533)	ENSMAMG00000015530	slc7a8a (ENSMAMG00000015358) #37	nedd8 (ENSMAMG00000015334)	GMPR (ENSMAMG00000015295)	ENSMAMG00000015283	ENSMAMG00000015273
Anabantoidei	ANCESTRAL SPECIES	24	ENSGT01030000234590.B.a.b	ENSGT00550000075058	ENSGT00390000006227	ENSGT00390000002849	ENSGT00940000155384.b.b	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00940000174852	ENSGT00940000176975	ENSGT00510000050415.C.i.a.a	ENSGT00510000050415.C.j.b.e	ENSGT01020000231088	ENSGT00510000050415.C.j.a	ENSGT00510000050415.C.i.a.b	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT00390000018596.A.a.b	ENSGT00940000175229	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000163988.i.b.a	ENSGT00940000163988.i.a	ENSGT00940000154810
Siamese fighting fish	MODERN SPECIES	10	ENSBSLG00000001817	slc7a7 (ENSBSLG00000001769) #20	oxa1l (ENSBSLG00000001625) #19	ENSBSLG00000001598	ENSBSLG00000001594	ENSBSLG00000010535	ENSBSLG00000010530	ENSBSLG00000010507	ENSBSLG00000010488	ENSBSLG00000010485	ENSBSLG00000010479	ENSBSLG00000010470	ENSBSLG00000010460	ENSBSLG00000010453	ENSBSLG00000010441 #23	mmp14a (ENSBSLG00000010388) #22	mrpl52 (ENSBSLG00000010383) #21	AJUBA (ENSBSLG00000010368) #27	acin1b (ENSBSLG00000010352) #34	efs (ENSBSLG00000010348)	dhrs4 (ENSBSLG00000010342)	tinf2 (ENSBSLG00000010338)	cideb (ENSBSLG00000010333)	gmpr2 (ENSBSLG00000010276)	ENSBSLG00000010257	slc7a8a (ENSBSLG00000009673) #37	SVEP1 (ENSBSLG00000009213)	ENSBSLG00000009169	ENSBSLG00000009152	ENSBSLG00000009142	ENSBSLG00000009077
Climbing perch	MODERN SPECIES	9	ENSATEG00000001372	ENSATEG00000001406	ENSATEG00000001427	ENSATEG00000025769	ENSATEG00000025871	ENSATEG00000028224	ENSATEG00000001478	ENSATEG00000001456	ENSATEG00000001490	ENSATEG00000001499	ENSATEG00000001520	ENSATEG00000001534	ENSATEG00000001542	ENSATEG00000001594	ENSATEG00000001606 #23	mmp14a (ENSATEG00000001619) #22	mrpl52 (ENSATEG00000001627) #21	ENSATEG00000001635 #27	acin1b (ENSATEG00000001677) #34	efs (ENSATEG00000001686)	dhrs4 (ENSATEG00000001699)	tinf2 (ENSATEG00000001711)	cideb (ENSATEG00000001729)	ENSATEG00000029824	ENSATEG00000001799	gmpr2 (ENSATEG00000001814)	nedd8 (ENSATEG00000001875)	slc7a8a (ENSATEG00000027219) #37	ENSATEG00000001901	ENSATEG00000001924	ENSATEG00000001952
Pinecone sodierfish	MODERN SPECIES	9	cldn15a (ENSMMDG00005012642)	fis1 (ENSMMDG00005012639)	zgc:103586 (ENSMMDG00005012626)	tm4sf5 (ENSMMDG00005012564)	ENSMMDG00005012563	mettl3 (ENSMMDG00005012561)	ttc5 (ENSMMDG00005012558)	CCNB1IP1 (ENSMMDG00005012557)	ENSMMDG00005012555	slc7a7 (ENSMMDG00005012554) #20	oxa1l (ENSMMDG00005012543) #19	ENSMMDG00005012541	ENSMMDG00005012538	ENSMMDG00005012536	ENSMMDG00005012535	mmp14a (ENSMMDG00005012533) #22	mrpl52 (ENSMMDG00005012531) #21	AJUBA (ENSMMDG00005012529) #27	acin1b (ENSMMDG00005012525) #34	efs (ENSMMDG00005012521)	dhrs4 (ENSMMDG00005012513)	tinf2 (ENSMMDG00005012512)	cideb (ENSMMDG00005012510)	ENSMMDG00005012509	gmpr2 (ENSMMDG00005012508)	nedd8 (ENSMMDG00005012506)	slc7a8a (ENSMMDG00005015741) #37	SVEP1 (ENSMMDG00005015720)	ENSMMDG00005015716	ptgr1.1 (ENSMMDG00005015715)	haus3 (ENSMMDG00005015713)
Cod	MODERN SPECIES	8	chrnb1l (ENSGMOG00000033557)	cldn7a (ENSGMOG00000017442)	ENSGMOG00000024246	ugt5g1 (ENSGMOG00000017450)	ENSGMOG00000017454	ENSGMOG00000017609	rgp1 (ENSGMOG00000017640)	ENSGMOG00000017648	pik3c3 (ENSGMOG00000017662)	ENSGMOG00000017707	faah2b (ENSGMOG00000003833)	ENSGMOG00000006702	ENSGMOG00000029579	ENSGMOG00000005514	ENSGMOG00000031874 #23	mmp14a (ENSGMOG00000015871) #22	mrpl52 (ENSGMOG00000035794) #21	ENSGMOG00000026505 #27	acin1b (ENSGMOG00000029768) #34	efs (ENSGMOG00000032763)	dhrs4 (ENSGMOG00000015785)	ENSGMOG00000015761	cideb (ENSGMOG00000015752)	ENSGMOG00000025261	ENSGMOG00000035812	ENSGMOG00000025143	gmpr2 (ENSGMOG00000015719)	nedd8 (ENSGMOG00000030264)	slc7a8a (ENSGMOG00000015687) #37	ENSGMOG00000015588	ENSGMOG00000015577
Protacanthopterygii	ANCESTRAL SPECIES	20	ENSGT00390000010169	ENSGT00940000160323.a.a	ENSGT00940000167281	ENSGT00940000157623	ENSGT00940000160414.c	ENSGT00940000163776.a.a	ENSGT01030000234590.B.a.b	ENSGT00550000075058	ENSGT00390000006227	ENSGT00390000002849	ENSGT00940000155384.b.b	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00510000050415.C.l	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w #34	ENSGT01030000235234	ENSGT00950000183008.a.a.b	ENSGT00940000164342	ENSGT00400000022326.a	ENSGT01050000245396	ENSGT00390000018596.A.a.b	ENSGT00950000182893.a.b.e.a	ENSGT00940000159574	ENSGT00940000155856.cb	ENSGT00940000158278.e.a #37	ENSGT00940000156061	ENSGT00940000154259.a
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	206															ENSGT00940000160783.c #23	ENSGT00940000157808.h.e #22	ENSGT00390000005763.p #21	ENSGT00940000160978.e #27	ENSGT00710000106790.w.n #34	ENSGT01030000235234	ENSGT00950000183008.a.a.b.e	ENSGT00940000164342.m	ENSGT00400000022326.a.c	ENSGT01050000245396	ENSGT00390000018596.A.a.b.d	ENSGT00940000175229	ENSGT00980000198821	ENSGT00940000159574.s	ENSGT00940000155856.cb.d	ENSGT00940000158278.e.a.e #37	ENSGT00940000156061.c
Huchen	MODERN SPECIES	2445															ENSHHUG00000047920 #23	mmp14a (ENSHHUG00000047931) #22	mrpl52 (ENSHHUG00000047951) #21	AJUBA (ENSHHUG00000047956) #27	acin1b (ENSHHUG00000047957) #34	dhrs4 (ENSHHUG00000047963)	efs (ENSHHUG00000047988)	ENSHHUG00000047989	cideb (ENSHHUG00000047993)	ENSHHUG00000047995	gmpr2 (ENSHHUG00000047997)	nedd8 (ENSHHUG00000048007)	ENSHHUG00000048049 #37	ENSHHUG00000048050 #37
Salmoninae_a	ANCESTRAL SPECIES	34	ENSGT00390000010169.d	ENSGT00940000160323.a.a.f.a	ENSGT00980000202504	ENSGT00940000160414.c	ENSGT00940000163776.a.a.d	ENSGT01030000234590.B.a.b	ENSGT00550000075058	ENSGT00390000006227.c	ENSGT00940000155384.b.b.d	ENSGT00940000160134.l #20	ENSGT00500000044904.a.b.g.b.c.a.b	ENSGT00940000163711.a.e.b	ENSGT00940000162700.e.a.a.a.a.a	ENSGT01030000234540.C.j	ENSGT00940000160783.c #23	ENSGT00940000157808.h.e #22	ENSGT00390000005763.p #21	ENSGT00940000160978.e #27	ENSGT00710000106790.w.n #34	ENSGT01030000235234	ENSGT00950000183008.a.a.b.e	ENSGT00940000164342.m	ENSGT00400000022326.a.c	ENSGT01050000245396	ENSGT00390000018596.A.a.b.d	ENSGT00940000175229	ENSGT00980000198821	ENSGT00940000159574.s	ENSGT00940000155856.cb.d	ENSGT00940000158278.e.a.e #37	ENSGT00940000156061.c
Oncorhynchus	ANCESTRAL SPECIES	31	ENSGT00550000075058	ENSGT00390000006227.c	ENSGT00940000155384.b.b.d	ENSGT00940000160134.k.a #20	ENSGT00530000063506.B.k #19	ENSGT00510000050415.C.l.b	ENSGT00940000174573.a.a	ENSGT00980000198800	ENSGT00510000050415.C.l.a	ENSGT00500000044904.a.b.g.b.c.b	ENSGT00500000044904.a.b.g.b.c.a.b	ENSGT00940000163711.a.e.b	ENSGT00940000162700.e.a.a.a.a.a	ENSGT01030000234540.C.j	ENSGT00940000160783.c #23	ENSGT00940000157808.h.e #22	ENSGT00390000005763.p #21	ENSGT00940000160978.e #27	ENSGT00710000106790.w.n #34	ENSGT01030000235234	ENSGT00950000183008.a.a.b.e	ENSGT00940000164342.m	ENSGT00400000022326.a.c	ENSGT01050000245396	ENSGT00390000018596.A.a.b.d	ENSGT00940000175229	ENSGT00980000198821	ENSGT00940000159574.s	ENSGT00940000155856.cb.d	ENSGT00940000158278.e.a.e #37	ENSGT00940000156061.c
Rainbow trout	MODERN SPECIES	30	mettl3 (ENSOMYG00000014048)	ttc5 (ENSOMYG00000014024)	ENSOMYG00000014015	slc7a7 (ENSOMYG00000013810) #20	oxa1l (ENSOMYG00000013737) #19	ENSOMYG00000013732	ENSOMYG00000062539	ENSOMYG00000071527	ENSOMYG00000077297	ENSOMYG00000061488	ENSOMYG00000053271	ENSOMYG00000013709	ENSOMYG00000013696	ENSOMYG00000013680	ENSOMYG00000013667 #23	mmp14a (ENSOMYG00000012980) #22	mrpl52 (ENSOMYG00000012890) #21	ENSOMYG00000012877 #27	acin1b (ENSOMYG00000012844) #34	efs (ENSOMYG00000012831)	dhrs4 (ENSOMYG00000012819)	ENSOMYG00000075426	ENSOMYG00000012810	ENSOMYG00000010862	cideb (ENSOMYG00000012794)	ENSOMYG00000012784	gmpr2 (ENSOMYG00000012778)	nedd8 (ENSOMYG00000012762)	slc7a8a (ENSOMYG00000012740) #37	ENSOMYG00000068673	ENSOMYG00000012294
Oncorhynchus_a	ANCESTRAL SPECIES	30	ENSGT00390000006227.c	ENSGT00940000155384.b.b.d	ENSGT00940000160134.k.a #20	ENSGT00530000063506.B.k #19	ENSGT00510000050415.C.l.b	ENSGT00940000174573.a.a	ENSGT00980000198800	ENSGT00510000050415.C.l.a	ENSGT00500000044904.a.b.g.b.c.b	ENSGT00500000044904.a.b.g.b.c.a.b.a	ENSGT00500000044904.a.b.g.b.c.a.a	ENSGT00940000163711.a.e.b	ENSGT00940000162700.e.a.a.a.a.a	ENSGT01030000234540.C.j	ENSGT00940000160783.c #23	ENSGT00940000157808.h.e #22	ENSGT00390000005763.p #21	ENSGT00940000160978.e #27	ENSGT00710000106790.w.n #34	ENSGT01030000235234.c	ENSGT00950000183008.a.a.b.e	ENSGT00940000164342.m	ENSGT00400000022326.a.c	ENSGT00390000018596.A.a.b.d	ENSGT00940000165001.a.b.s	ENSGT00980000198821	ENSGT00940000159574.s	ENSGT00940000165806.i	ENSGT00940000158278.e.a.e #37	ENSGT00940000156061.c	ENSGT00940000163988.i.a
Coho salmon	MODERN SPECIES	7	ENSOKIG00005033103	ttc5 (ENSOKIG00005033086)	ENSOKIG00005033081	slc7a7 (ENSOKIG00005032966) #20	ENSOKIG00005032934	ENSOKIG00005032907	ENSOKIG00005032891	ENSOKIG00005032884	ENSOKIG00005032854	ENSOKIG00005032842	ENSOKIG00005032827	ENSOKIG00005032806	ENSOKIG00005032786	ENSOKIG00005032751	ENSOKIG00005032725 #23	mmp14a (ENSOKIG00005032212) #22	mrpl52 (ENSOKIG00005032175) #21	AJUBA (ENSOKIG00005032163) #27	acin1b (ENSOKIG00005032120) #34	ENSOKIG00005032101	efs (ENSOKIG00005032095)	dhrs4 (ENSOKIG00005032017)	tinf2 (ENSOKIG00005031997)	cideb (ENSOKIG00005031973)	ENSOKIG00005031954	ENSOKIG00005031951	gmpr2 (ENSOKIG00005031819)	ENSOKIG00005031792	slc7a8a (ENSOKIG00005031054) #37	ENSOKIG00005030987	SVEP1 (ENSOKIG00005029926)
Chinook salmon	MODERN SPECIES	143											ENSOTSG00005026347	ENSOTSG00005026346	ENSOTSG00005026345	ENSOTSG00005026344	ENSOTSG00005026343 #23	mmp14a (ENSOTSG00005025401) #22	mrpl52 (ENSOTSG00005025400) #21	ENSOTSG00005025384 #27	ENSOTSG00005025383 #34	ENSOTSG00005025377	ENSOTSG00005025378	efs (ENSOTSG00005025376)	dhrs4 (ENSOTSG00005025350)	ENSOTSG00005025349	cideb (ENSOTSG00005025348)	ENSOTSG00005025347	ENSOTSG00005025219	nedd8 (ENSOTSG00005025216)	slc7a8a (ENSOTSG00005025215) #37	ENSOTSG00005025213
Salmo	ANCESTRAL SPECIES	51	ENSGT00940000160323.a.a.f.a	ENSGT00980000202504	ENSGT00940000160414.c	ENSGT00940000163776.a.a.d	ENSGT01030000234590.B.a.b	ENSGT00550000075058.m	ENSGT00390000006227.c	ENSGT00940000155384.b.b.d	ENSGT00940000160134.k.a #20	ENSGT00530000063506.B.k #19	ENSGT00510000050415.C.l.b.a	ENSGT00510000050415.C.l.b.b	ENSGT00940000162700.e.a.a.a.a.a.c	ENSGT01030000234540.C.j	ENSGT00940000160783.c #23	ENSGT00940000157808.h.e #22	ENSGT00390000005763.p #21	ENSGT00940000160978.e #27	ENSGT00710000106790.w.n #34	ENSGT00950000183008.a.a.b.e	ENSGT00940000164342.m	ENSGT00400000022326.a.c	ENSGT00390000018596.A.a.b.d	ENSGT00940000159574.s	ENSGT00940000155856.cb.d	ENSGT00940000158278.e.a.e #37	ENSGT00940000156061.c	ENSGT00940000154259.a.b	ENSGT00940000154810.n.b.b	ENSGT00950000182932.B.b.d	ENSGT00390000013043.mb.b
Atlantic salmon	MODERN SPECIES	9	ENSSSAG00000089774	ENSSSAG00000066453	ENSSSAG00000066459	ENSSSAG00000092702	ENSSSAG00000101816	ENSSSAG00000040184	ENSSSAG00000040226	ENSSSAG00000102714	ENSSSAG00000040291	ENSSSAG00000040351	ENSSSAG00000040378	ENSSSAG00000040458	ENSSSAG00000040529	ENSSSAG00000040550	ENSSSAG00000040569 #23	mmp14a (ENSSSAG00000082863) #22	ENSSSAG00000041616	ENSSSAG00000041638 #27	efs (ENSSSAG00000041737)	dhrs4 (ENSSSAG00000041745)	tinf2 (ENSSSAG00000041816)	cideb (ENSSSAG00000041835)	ENSSSAG00000041850	gmpr2 (ENSSSAG00000041859)	ENSSSAG00000042237	slc7a8a (ENSSSAG00000008484) #37	ENSSSAG00000045616	ENSSSAG00000046814	ENSSSAG00000046836	nat8l (ENSSSAG00000111117)	ENSSSAG00000083862
River trout	MODERN SPECIES	35	ENSSTUG00000002428	slc7a7 (ENSSTUG00000002445) #20	oxa1l (ENSSTUG00000002556) #19	ENSSTUG00000002714	ENSSTUG00000002727	zgc:171695 (ENSSTUG00000002731)	ENSSTUG00000002739	ENSSTUG00000002778	ENSSTUG00000002894	ENSSTUG00000002908	ENSSTUG00000002898	ENSSTUG00000002924	ENSSTUG00000002949	ENSSTUG00000002958	ENSSTUG00000002977 #23	mmp14a (ENSSTUG00000003041) #22	mrpl52 (ENSSTUG00000003600) #21	AJUBA (ENSSTUG00000003613) #27	acin1b (ENSSTUG00000003636) #34	efs (ENSSTUG00000003706)	dhrs4 (ENSSTUG00000003726)	tinf2 (ENSSTUG00000003837)	cideb (ENSSTUG00000003853)	ENSSTUG00000003866	gmpr2 (ENSSTUG00000003885)	nedd8 (ENSSTUG00000004024)	slc7a8a (ENSSTUG00000004058) #37	SVEP1 (ENSSTUG00000004531)	ENSSTUG00000005891	PTGR1 (ENSSTUG00000005965)	nat8l (ENSSTUG00000005980)
Salmoninae	ANCESTRAL SPECIES	53	ENSGT00940000155202.h.a.a	ENSGT00940000163776.a.a.c	ENSGT00390000006227.d	ENSGT00390000002849	ENSGT00940000155384.b.b.c	ENSGT00940000160134.k.b #20	ENSGT00530000063506.B.l #19	ENSGT00940000156987.j	ENSGT00990000204936.b.b.b	ENSGT00990000207047	ENSGT00940000174573.a.b	ENSGT00990000204936.b.a	ENSGT00510000050415.C.k.b	ENSGT00990000204936.a	ENSGT00940000160783.d #23	ENSGT00940000157808.h.f #22	ENSGT00390000005763.o #21	ENSGT00940000160978.f #27	ENSGT00710000106790.w.m #34	ENSGT00950000183008.a.a.b.f	ENSGT00940000164342.n	ENSGT00400000022326.a.d	ENSGT00390000018596.A.a.b.c	ENSGT00950000182893.a.b.e.a	ENSGT00940000159574.t	ENSGT00940000155856.cb.c	ENSGT00940000158278.e.a.f #37	ENSGT00940000156061.d	ENSGT00940000154259.a.a	ENSGT00940000154810.n.b.a	ENSGT00390000011904.e
Salmoninae_a	ANCESTRAL SPECIES	20	ENSGT00940000155202.h.a.a	ENSGT00940000163776.a.a.c	ENSGT00390000006227.d	ENSGT00390000002849	ENSGT00940000155384.b.b.c	ENSGT00940000160134.k.b #20	ENSGT00530000063506.B.l #19	ENSGT00940000156987.j	ENSGT00990000204936.b.b.b.b	ENSGT00990000207047	ENSGT00940000174573.a.b	ENSGT00990000204936.b.a	ENSGT00510000050415.C.k.b	ENSGT00990000204936.a	ENSGT00940000160783.d #23	ENSGT00940000157808.h.f #22	ENSGT00390000005763.o #21	ENSGT00940000160978.f #27	ENSGT00710000106790.w.m #34	ENSGT00950000183008.a.a.b.f	ENSGT00940000164342.n	ENSGT00400000022326.a.d	ENSGT00390000018596.A.a.b.c	ENSGT00950000182893.a.b.e.a	ENSGT00940000159574.t	ENSGT00940000155856.cb.c	ENSGT00940000158278.e.a.f #37	ENSGT00940000156061.d	ENSGT00940000154259.a.a	ENSGT00940000154810.n.b.a	ENSGT00390000011904.e
Oncorhynchus	ANCESTRAL SPECIES	9	ENSGT00940000163776.a.a.c	ENSGT00390000006227.d	ENSGT00390000002849	ENSGT00940000155384.b.b.c	ENSGT00940000160134.k.b #20	ENSGT00530000063506.B.l #19	ENSGT00940000156987.j	ENSGT00990000204936.b.b.b.b	ENSGT00990000209826	ENSGT01000000219320	ENSGT00990000204936.b.a	ENSGT00510000050415.C.k.b	ENSGT00990000204936.a	ENSGT00940000163573	ENSGT00940000160783.d #23	ENSGT00940000157808.h.f #22	ENSGT00390000005763.o #21	ENSGT00940000160978.f #27	ENSGT00710000106790.w.m #34	ENSGT00950000183008.a.a.b.f	ENSGT00940000164342.n	ENSGT00400000022326.a.d	ENSGT00390000018596.A.a.b.c	ENSGT00950000182893.a.b.e.a	ENSGT00940000159574.t	ENSGT00940000155856.cb.c	ENSGT00940000158278.e.a.f #37	ENSGT00940000156061.d	ENSGT00940000154259.a.a	ENSGT00940000154810.n.b.a	ENSGT00390000011904.e
Rainbow trout	MODERN SPECIES	13	ENSOMYG00000057963	ttc5 (ENSOMYG00000036368)	ENSOMYG00000036282	ENSOMYG00000036266	slc7a7 (ENSOMYG00000036252) #20	ENSOMYG00000036231	ENSOMYG00000036218	ENSOMYG00000055172	ENSOMYG00000036199	ENSOMYG00000036179	ENSOMYG00000036176	ENSOMYG00000061290	ENSOMYG00000036158	ENSOMYG00000036148	ENSOMYG00000036120 #23	mmp14a (ENSOMYG00000035480) #22	mrpl52 (ENSOMYG00000035341) #21	ENSOMYG00000035323 #27	acin1b (ENSOMYG00000035307) #34	efs (ENSOMYG00000035275)	dhrs4 (ENSOMYG00000035221)	tinf2 (ENSOMYG00000035203)	cideb (ENSOMYG00000035196)	ENSOMYG00000072901	GMPR (ENSOMYG00000035176)	ENSOMYG00000035161	slc7a8a (ENSOMYG00000035105) #37	ENSOMYG00000062631	ENSOMYG00000034992	ENSOMYG00000034840	ENSOMYG00000034810
Oncorhynchus_a	ANCESTRAL SPECIES	16	ENSGT00390000006227.d	ENSGT00390000002849	ENSGT00940000155384.b.b.c	ENSGT00940000160134.k.b #20	ENSGT00530000063506.B.l #19	ENSGT00940000156987.j	ENSGT00990000204936.b.b.b.b	ENSGT00990000209826	ENSGT01000000219320.b	ENSGT01000000219320.a	ENSGT00990000204936.b.a	ENSGT00510000050415.C.k.b	ENSGT00990000204936.a	ENSGT00940000163573	ENSGT00940000160783.d #23	ENSGT00940000157808.h.f #22	ENSGT00390000005763.o #21	ENSGT00940000160978.f #27	ENSGT00710000106790.w.m #34	ENSGT01030000235234.d	ENSGT00950000183008.a.a.b.f	ENSGT00940000164342.n	ENSGT00400000022326.a.d	ENSGT00390000018596.A.a.b.c	ENSGT00950000182893.a.b.e.a	ENSGT00940000159574.t	ENSGT00940000155856.cb.c	ENSGT00940000158278.e.a.f #37	ENSGT00940000156061.d	ENSGT00940000154259.a.a	ENSGT00940000154810.n.b.a
Chinook salmon	MODERN SPECIES	6	CCNB1IP1 (ENSOTSG00005013974)	ENSOTSG00005013973	slc7a7 (ENSOTSG00005013862) #20	oxa1l (ENSOTSG00005013741) #19	ENSOTSG00005013739	ENSOTSG00005013736	ENSOTSG00005013738	ENSOTSG00005013735	ENSOTSG00005013733	ENSOTSG00005013732	ENSOTSG00005013731	ENSOTSG00005013730	ENSOTSG00005013728	ENSOTSG00005013727	ENSOTSG00005013726 #23	mmp14a (ENSOTSG00005013297) #22	mrpl52 (ENSOTSG00005013295) #21	ENSOTSG00005013293 #27	acin1b (ENSOTSG00005013287) #34	ENSOTSG00005013284	efs (ENSOTSG00005013282)	dhrs4 (ENSOTSG00005013274)	tinf2 (ENSOTSG00005013273)	cideb (ENSOTSG00005013272)	ENSOTSG00005013271	gmpr2 (ENSOTSG00005013265)	nedd8 (ENSOTSG00005013243)	slc7a8a (ENSOTSG00005011795) #37	SVEP1 (ENSOTSG00005011766)	TXN (ENSOTSG00005011756)	ENSOTSG00005011753
Coho salmon	MODERN SPECIES	29	ENSOKIG00005016386	slc7a7 (ENSOKIG00005016271) #20	oxa1l (ENSOKIG00005016153) #19	ENSOKIG00005016145	ENSOKIG00005016132	ENSOKIG00005016115	ENSOKIG00005016102	ENSOKIG00005016093	ENSOKIG00005016075	ENSOKIG00005016064	ENSOKIG00005016050	ENSOKIG00005016009	ENSOKIG00005015991	ENSOKIG00005015977	ENSOKIG00005015956 #23	mmp14a (ENSOKIG00005015923) #22	ENSOKIG00005015909	AJUBA (ENSOKIG00005015869) #27	acin1b (ENSOKIG00005015851) #34	efs (ENSOKIG00005015835)	dhrs4 (ENSOKIG00005015773)	tinf2 (ENSOKIG00005015742)	cideb (ENSOKIG00005015727)	ENSOKIG00005015688	gmpr2 (ENSOKIG00005015654)	nedd8 (ENSOKIG00005015631)	slc7a8a (ENSOKIG00005014559) #37	ENSOKIG00005014495	SVEP1 (ENSOKIG00005013840)	TXN (ENSOKIG00005013779)	ENSOKIG00005013757
Salmo	ANCESTRAL SPECIES	70	ENSGT00390000002849	ENSGT00940000155384.b.b.c	ENSGT00940000160134.k.b #20	ENSGT00530000063506.B.l #19	ENSGT00940000156987.j	ENSGT00940000174852	ENSGT00940000174573.a.a	ENSGT00510000050415.C.k.a	ENSGT00990000204936.b.b.a.a	ENSGT00990000207047	ENSGT00940000174573.a.b	ENSGT00990000204936.b.a	ENSGT00510000050415.C.k.b	ENSGT00990000204936.a	ENSGT00940000160783.d #23	ENSGT00940000157808.h.f #22	ENSGT00390000005763.o #21	ENSGT00940000160978.f #27	ENSGT00710000106790.w.m #34	ENSGT00950000183008.a.a.b.f	ENSGT00940000164342.n	ENSGT00400000022326.a.d	ENSGT00390000018596.A.a.b.c	ENSGT00950000182893.a.b.e.a	ENSGT00940000159574.t	ENSGT00940000155856.cb.c	ENSGT00940000158278.e.a.f #37	ENSGT00940000156061.d	ENSGT00940000154259.a.a	ENSGT00940000154810.n.b.a	ENSGT00390000011904.e
River trout	MODERN SPECIES	38	CCNB1IP1 (ENSSTUG00000023886)	ENSSTUG00000023895	slc7a7 (ENSSTUG00000023908) #20	oxa1l (ENSSTUG00000024000) #19	ENSSTUG00000024032	ENSSTUG00000024055	ENSSTUG00000024142	ENSSTUG00000024168	ENSSTUG00000024184	ENSSTUG00000024199	ENSSTUG00000024216	ENSSTUG00000024247	ENSSTUG00000024256	ENSSTUG00000024277	ENSSTUG00000024288 #23	mmp14a (ENSSTUG00000024317) #22	mrpl52 (ENSSTUG00000024422) #21	AJUBA (ENSSTUG00000024453) #27	ENSSTUG00000024527 #34	ENSSTUG00000024626 #34	efs (ENSSTUG00000024636)	dhrs4 (ENSSTUG00000024657)	tinf2 (ENSSTUG00000024858)	cideb (ENSSTUG00000024876)	ENSSTUG00000024885	gmpr2 (ENSSTUG00000024896)	nedd8 (ENSSTUG00000025092)	slc7a8a (ENSSTUG00000025110) #37	SVEP1 (ENSSTUG00000025283)	ENSSTUG00000025711	ENSSTUG00000025723
Atlantic salmon	MODERN SPECIES	26	ENSSSAG00000115036	ENSSSAG00000006060	ENSSSAG00000092735	ENSSSAG00000121505	ENSSSAG00000006199	ENSSSAG00000118486	ENSSSAG00000044458	ENSSSAG00000062069	ENSSSAG00000091347	ENSSSAG00000095891	ENSSSAG00000005428	ENSSSAG00000082238	ENSSSAG00000006001	ENSSSAG00000103370	ENSSSAG00000006270 #23	mmp14a (ENSSSAG00000107354) #22	mrpl52 (ENSSSAG00000008288) #21	ENSSSAG00000008295 #27	acin1b (ENSSSAG00000008306) #34	efs (ENSSSAG00000008328)	dhrs4 (ENSSSAG00000104995)	tinf2 (ENSSSAG00000008334)	cideb (ENSSSAG00000008409)	ENSSSAG00000008419	gmpr2 (ENSSSAG00000008429)	ENSSSAG00000008438	slc7a8a (ENSSSAG00000042367) #37	ENSSSAG00000010271	ENSSSAG00000015288	ENSSSAG00000015647	poln (ENSSSAG00000015698)
Huchen	MODERN SPECIES	355	ENSHHUG00000001413	ttc5 (ENSHHUG00000001433)	CCNB1IP1 (ENSHHUG00000001437)	ENSHHUG00000001443	slc7a7 (ENSHHUG00000001471) #20	oxa1l (ENSHHUG00000001553) #19	ENSHHUG00000001690	ENSHHUG00000001713	ENSHHUG00000001723	ENSHHUG00000001757	ENSHHUG00000001783	ENSHHUG00000001789	ENSHHUG00000001813	ENSHHUG00000001825	ENSHHUG00000001838 #23	mmp14a (ENSHHUG00000001845) #22	mrpl52 (ENSHHUG00000001879) #21	AJUBA (ENSHHUG00000001884) #27	acin1b (ENSHHUG00000001890) #34	efs (ENSHHUG00000001930)	dhrs4 (ENSHHUG00000001934)	tinf2 (ENSHHUG00000001947)	cideb (ENSHHUG00000001954)	ENSHHUG00000001962	gmpr2 (ENSHHUG00000002001)	nedd8 (ENSHHUG00000002036)	slc7a8a (ENSHHUG00000002184) #37	ENSHHUG00000002248	ENSHHUG00000002264	ENSHHUG00000002274	ENSHHUG00000002280
Northern pike	MODERN SPECIES	23	CCNB1IP1 (ENSELUG00000024445)	ENSELUG00000024534	slc7a7 (ENSELUG00000024582) #20	oxa1l (ENSELUG00000024593) #19	ENSELUG00000003202	ENSELUG00000003266	ENSELUG00000003215	ENSELUG00000003228	ENSELUG00000031551	ENSELUG00000003295	ENSELUG00000003305	ENSELUG00000003316	ENSELUG00000032237	ENSELUG00000003330	ENSELUG00000003357 #23	mmp14a (ENSELUG00000003376) #22	mrpl52 (ENSELUG00000003394) #21	AJUBA (ENSELUG00000003415) #27	acin1b (ENSELUG00000003511) #34	efs (ENSELUG00000003587)	dhrs4 (ENSELUG00000003633)	tinf2 (ENSELUG00000003657)	cideb (ENSELUG00000003680)	ENSELUG00000003689	gmpr2 (ENSELUG00000003713)	nedd8 (ENSELUG00000003724)	slc7a8a (ENSELUG00000003747) #37	SVEP1 (ENSELUG00000003795)	TXN (ENSELUG00000003817)	ptgr1.1 (ENSELUG00000003851)	ENSELUG00000025511
Osteoglossiformes	ANCESTRAL SPECIES	198	ENSGT01100000263644	ENSGT00390000018123.a.b	ENSGT00940000159445	ENSGT00940000164991.b	ENSGT00940000160206.e	ENSGT00940000161519	ENSGT00550000075058	ENSGT00390000006227	ENSGT00390000002849	ENSGT00940000160134 #20	ENSGT00530000063506.B #19	ENSGT00940000174852	ENSGT00990000204936	ENSGT00510000050415.C	ENSGT00940000160783 #23	ENSGT00940000157808.h #22	ENSGT00390000005763 #21	ENSGT00940000160978 #27	ENSGT00710000106790.w.a #34	ENSGT00950000183008.a.a.b	ENSGT00390000015415	ENSGT00950000182924.A.a	ENSGT00940000165127.b	ENSGT00390000008711	ENSGT00940000161043	ENSGT00510000048167.b.a	ENSGT00390000010888
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	2	ttc5 (ENSSFOG00015022188)	CCNB1IP1 (ENSSFOG00015031068)	slc7a7 (ENSSFOG00015028283) #20	oxa1l (ENSSFOG00015022134) #19	ENSSFOG00015031013	ENSSFOG00015024910	ENSSFOG00015033166	ENSSFOG00015024750	ENSSFOG00015022232	ENSSFOG00015004561	ENSSFOG00015024805	ENSSFOG00015025527	ENSSFOG00015006569	ENSSFOG00015028877	ENSSFOG00015006548 #23	mmp14a (ENSSFOG00015006500) #22	ENSSFOG00015024945	AJUBA (ENSSFOG00015031147) #27	acin1b (ENSSFOG00015029162) #34	efs (ENSSFOG00015006316)	ENSSFOG00015024615	ENSSFOG00015002172	ENSSFOG00015033265	ENSSFOG00015032913	ENSSFOG00015028667	ENSSFOG00015030349	ENSSFOG00015026608	ENSSFOG00015028501	cideb (ENSSFOG00015033066)	tinf2 (ENSSFOG00015002264)	dhrs4 (ENSSFOG00015002275)
Asian bonytongue	MODERN SPECIES	2	ttc5 (ENSSFOG00015030063)	ENSSFOG00015028159	slc7a7 (ENSSFOG00015022170) #20	oxa1l (ENSSFOG00015026573) #19	ENSSFOG00015032797	ENSSFOG00015028065	ENSSFOG00015022276	ENSSFOG00015025816	ENSSFOG00015026480	ENSSFOG00015023381	ENSSFOG00015018268	ENSSFOG00015024938	ENSSFOG00015026248	ENSSFOG00015006558	ENSSFOG00015028266 #23	mmp14a (ENSSFOG00015025400) #22	ENSSFOG00015031719	AJUBA (ENSSFOG00015006472) #27	acin1b (ENSSFOG00015006344) #34	efs (ENSSFOG00015026135)	EMC4 (ENSSFOG00015029492)	ENSSFOG00015029951	ENSSFOG00015033303	ENSSFOG00015030809	ENSSFOG00015032785	ENSSFOG00015028338	ENSSFOG00015029713	ENSSFOG00015031965	ENSSFOG00015030104	ENSSFOG00015026545	ENSSFOG00015032367
P. kingsleyae	MODERN SPECIES	61														ENSPKIG00000007262	ENSPKIG00000007221 #23	mmp14a (ENSPKIG00000007150) #22	mrpl52 (ENSPKIG00000007085) #21	AJUBA (ENSPKIG00000007050) #27	acin1b (ENSPKIG00000006917) #34	efs (ENSPKIG00000006817)	ENSPKIG00000006780	ENSPKIG00000006746	rnf4 (ENSPKIG00000006722)	fgfrl1a (ENSPKIG00000006697)	ENSPKIG00000006667	ENSPKIG00000006651	spon2b (ENSPKIG00000006623)	ENSPKIG00000006601	zgc:136929 (ENSPKIG00000006506)	maea (ENSPKIG00000006400)	uvssa (ENSPKIG00000006302)
Reedfish	MODERN SPECIES	10	pabpn1 (ENSECRG00000000559)	ngdn (ENSECRG00000000541)	ENSECRG00000000513	ENSECRG00000000491	ENSECRG00000000479	ENSECRG00000000464	ENSECRG00000000445	ENSECRG00000000432	abhd4 (ENSECRG00000000420) #17	dad1 (ENSECRG00000000408) #16	tgm1l4 (ENSECRG00000005003)	rabggta (ENSECRG00000004982)	ENSECRG00000004964	ENSECRG00000004953	ENSECRG00000004931 #23	mmp14a (ENSECRG00000004914) #22	mrpl52 (ENSECRG00000004906) #21	AJUBA (ENSECRG00000004870) #27	ENSECRG00000004833 #34	ENSECRG00000004822 #34	si:ch211-14a17.11 (ENSECRG00000004809) #35	ENSECRG00000004800	ENSECRG00000004789	mettl3 (ENSECRG00000004772)	mettl3 (ENSECRG00000004761)	ttc5 (ENSECRG00000004750)	ENSECRG00000004742	CCNB1IP1 (ENSECRG00000004739)	ENSECRG00000004733	slc7a7 (ENSECRG00000004709) #20	oxa1l (ENSECRG00000004677) #19
Cyclostomata	DUPLICATION
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00940000157808.a #22
Lamprey	MODERN SPECIES	631													ENSPMAG00000001830	ENSPMAG00000001826	sf3b3 (ENSPMAG00000001793)	ENSPMAG00000001788 #22
Hagfish	MODERN SPECIES	215	ENSEBUG00000011622	ENSEBUG00000012121	ENSEBUG00000015083	ENSEBUG00000014805	ENSEBUG00000014842	ENSEBUG00000005402	ENSEBUG00000006493	ENSEBUG00000016969	phf10 (ENSEBUG00000005523)	ENSEBUG00000010119	gpr137ba (ENSEBUG00000012279)	ENSEBUG00000003086	GNG3 (ENSEBUG00000008497)	ENSEBUG00000008638	MAP1LC3C (ENSEBUG00000007605)	ENSEBUG00000009721 #22	rpl3 (ENSEBUG00000008831)	eif6 (ENSEBUG00000004868)	ENSEBUG00000012533	ENSEBUG00000014720	ENSEBUG00000008099	ENSEBUG00000008199	ENSEBUG00000004979	ENSEBUG00000001311	ENSEBUG00000002928	ENSEBUG00000005222	ENSEBUG00000007778	ENSEBUG00000006375	ENSEBUG00000015652	ENSEBUG00000013277	ENSEBUG00000009370
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00940000157808.b #22
Lamprey	MODERN SPECIES	1607														ptpn2a (ENSPMAG00000006608)	GAN (ENSPMAG00000006609)	ENSPMAG00000006619 #22