Euteleosteomorpha	ANCESTRAL SPECIES	39	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00940000160464	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i #15	ENSGT00940000153524.d	ENSGT00940000165622	ENSGT00940000153524.c	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.B ##30	ENSGT00910000144271.A #30	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487 #33	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000177291 #35	ENSGT00940000154201.a.a.b.d #36	ENSGT00940000154716.hc	ENSGT01030000234534.B.a.a.a.a.a.a
Acanthomorphata	ANCESTRAL SPECIES	11	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00940000160464	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i #15	ENSGT00940000153524.d	ENSGT00940000153524.c	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A #30	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487 #33	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000177291 #35	ENSGT00940000154201.a.a.b.d #36	ENSGT00940000164119	ENSGT00940000159261.d.a #37	ENSGT01030000234534.B.a.a.a.a.a.a
Euacanthomorphacea	ANCESTRAL SPECIES	9	ENSGT00390000014856	ENSGT00940000165199	ENSGT00940000160699	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT00940000178278 #14	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A #30	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487 #33	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000177291 #35	ENSGT00940000154201.a.a.b.d #36	ENSGT00940000159261.d.a #37	ENSGT01030000234534.B.a.a.a.a.a.a	ENSGT00940000154662.c
Percomorphaceae	ANCESTRAL SPECIES	12	ENSGT00940000160753	ENSGT00390000014856	ENSGT00940000165199	ENSGT00940000160699	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A #30	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487 #33	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000177291 #35	ENSGT00940000154201.a.a.b.d #36	ENSGT00940000159261.d.a #37	ENSGT01030000234534.B.a.a.a.a.a.a	ENSGT00940000154662.c
Percomorphaceae_B	ANCESTRAL SPECIES	9	ENSGT00390000014856	ENSGT00940000165199	ENSGT00940000160699	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.b #15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.d ##30	ENSGT00910000144271.A.c.a #27	ENSGT00910000144271.A.c.b.a.a ##30	ENSGT00910000144271.A.c.b.a.b ##30	ENSGT00910000144271.A.c.b.b #30	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487 #33	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000177291 #35
Percomorphaceae_C	ANCESTRAL SPECIES	8	ENSGT00940000160699	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.a.b ##15	ENSGT00940000178278 #14	ENSGT01030000234551.i.e.b #15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.d ##30	ENSGT00910000144271.A.c.a #27	ENSGT00910000144271.A.c.b.a.a ##30	ENSGT00910000144271.A.c.b.a.b ##30	ENSGT00910000144271.A.c.b.b #30	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487 #33	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000177291 #35
Eupercaria	ANCESTRAL SPECIES	8	ENSGT00940000160699	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.a.b ##15	ENSGT00940000178278 #14	ENSGT01030000234551.i.e.b #15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.d ##30	ENSGT00910000144271.A.c.a #27	ENSGT00910000144271.A.c.b.b #30	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487 #33	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000177291 #35	ENSGT00940000154201.a.a.b.d #36	ENSGT00940000159261.d.a #37
Eupecaria_A	ANCESTRAL SPECIES	11	ENSGT00940000160699	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.b.o.b ##15	ENSGT00940000178278 #14	ENSGT01030000234551.i.e.b.p #15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.d ##30	ENSGT00910000144271.A.c.a #27	ENSGT00910000144271.A.c.b.b #30	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487 #33	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000177291 #35	ENSGT00940000154201.a.a.b.d #36	ENSGT00940000159261.d.a #37
Eupecaria_B	ANCESTRAL SPECIES	10	ENSGT00940000160699	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.b.o.a ##15	ENSGT00940000178278 #14	ENSGT01030000234551.i.e.b.p #15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.d ##30	ENSGT00910000144271.A.c.a #27	ENSGT00910000144271.A.c.b.b.b.b #28	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487 #33	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000177291 #35	ENSGT00940000154201.a.a.b.d #36	ENSGT00940000159261.d.a #37
Perciformes	ANCESTRAL SPECIES	8	ENSGT00390000014856	ENSGT00940000165199	ENSGT00940000160699	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.a.b ##15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.c.a #27	ENSGT00910000144271.A.c.b.b.a ##30	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487 #33	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000177291 #35	ENSGT00940000154201.a.a.b.d #36	ENSGT00940000159261.d.a #37	ENSGT01030000234534.B.a.a.a.a.a.a
Perciformes_a	ANCESTRAL SPECIES	6	ENSGT00940000165199	ENSGT00940000160699	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT00940000178278 #14	ENSGT01030000234551.i.e.b.p #15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.c.a #27	ENSGT00910000144271.A.c.b.b.b.b #28	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487 #33	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000177291 #35	ENSGT00940000154201.a.a.b.d #36	ENSGT00940000159261.d.a #37	ENSGT01030000234534.B.a.a.a.a.a.a
Channel bull blenny	MODERN SPECIES	18	tmem161a (ENSCGOG00000011698) #7	slc25a42 (ENSCGOG00000011734) #8	MAU2 (ENSCGOG00000011740) #9	gatad2ab (ENSCGOG00000011862) #10	yjefn3 (ENSCGOG00000011882) #11	CILP2 (ENSCGOG00000011886) #12	si:ch211-212d10.2 (ENSCGOG00000011926) #13	ENSCGOG00000011928 #14	ENSCGOG00000011931 #15	ENSCGOG00000011935 #16	ENSCGOG00000011938 #17	midn (ENSCGOG00000011953) #18	atp5f1d (ENSCGOG00000011957) #19	CBARP (ENSCGOG00000002622) #20	fstl3 (ENSCGOG00000002659) #21	RNF126 (ENSCGOG00000002681) #22	bsg (ENSCGOG00000002787) #23	HCN2 (ENSCGOG00000002811) #24	POLRMT (ENSCGOG00000002924) #25	fgf22 (ENSCGOG00000002971) #26	ENSCGOG00000002978 #27	ENSCGOG00000003061 #28	ENSCGOG00000003062 #29	ENSCGOG00000003073 #30	ENSCGOG00000003110 #31	micos13 (ENSCGOG00000003115) #32	hsd11b1la (ENSCGOG00000003118) #33	rgmd (ENSCGOG00000003121) #34	ENSCGOG00000003124 #35	celf5a (ENSCGOG00000003127) #36	creb3l3a (ENSCGOG00000003219) #37
Pike perch	MODERN SPECIES	34	slc25a42 (ENSSLUG00000014736) #8	MAU2 (ENSSLUG00000014721) #9	gatad2ab (ENSSLUG00000014711) #10	yjefn3 (ENSSLUG00000014692) #11	CILP2 (ENSSLUG00000014655) #12	si:ch211-212d10.2 (ENSSLUG00000014646) #13	ENSSLUG00000014643 #15	ENSSLUG00000014632 #15	ENSSLUG00000014597 #15	ENSSLUG00000014579 #15	ENSSLUG00000014553 #15	midn (ENSSLUG00000014544) #18	atp5f1d (ENSSLUG00000014531) #19	CBARP (ENSSLUG00000014513) #20	fstl3 (ENSSLUG00000014490) #21	RNF126 (ENSSLUG00000014478) #22	bsg (ENSSLUG00000014469) #23	HCN2 (ENSSLUG00000014464) #24	POLRMT (ENSSLUG00000014431) #25	fgf22 (ENSSLUG00000014413) #26	ENSSLUG00000014400 #27	ENSSLUG00000014384 #28	ENSSLUG00000014370 #28	ENSSLUG00000014362 #28	ENSSLUG00000014352 #28	ENSSLUG00000014348	ENSSLUG00000014341 #31	micos13 (ENSSLUG00000014338) #32	hsd11b1la (ENSSLUG00000014330) #33	rgmd (ENSSLUG00000014319) #34	celf5a (ENSSLUG00000013580) #36
Cottioidei	ANCESTRAL SPECIES	5	ENSGT00940000165199	ENSGT00940000160699	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.b.p #15	ENSGT01030000234551.i.e.a.b ##15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.c.b.b.a.a ##30	ENSGT00910000144271.A.c.b.b.a.b ##30	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487 #33	ENSGT00940000177291 #35	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000154201.a.a.b.d #36	ENSGT00940000159261.d.a #37	ENSGT01030000234534.B.a.a.a.a.a.a
Lumpfish	MODERN SPECIES	19	ENSCLMG00005000768	NCAN (ENSCLMG00005000748)	SLC25A42 (ENSCLMG00005000576) #8	MAU2 (ENSCLMG00005000533) #9	gatad2ab (ENSCLMG00005000526) #10	yjefn3 (ENSCLMG00005000522) #11	CILP2 (ENSCLMG00005000493) #12	si:ch211-212d10.2 (ENSCLMG00005000480) #13	ENSCLMG00005000478 #15	ENSCLMG00005000477 #15	ENSCLMG00005000472 ##12	midn (ENSCLMG00005000447) #18	atp5f1d (ENSCLMG00005000440) #19	CBARP (ENSCLMG00005000433) #20	fstl3 (ENSCLMG00005000424) #21	RNF126 (ENSCLMG00005000407) #22	bsg (ENSCLMG00005000400) #23	HCN2 (ENSCLMG00005000396) #24	POLRMT (ENSCLMG00005000389) #25	fgf22 (ENSCLMG00005000387) #26	ENSCLMG00005000385 ##30	ENSCLMG00005000383 ##30	ENSCLMG00005000381	ENSCLMG00005000380 #31	micos13 (ENSCLMG00005000377) #32	hsd11b1la (ENSCLMG00005000375) #33	ENSCLMG00005000374 #35	rgmd (ENSCLMG00005000373) #34	ENSCLMG00005000371	creb3l3a (ENSCLMG00005000369) #37	rxfp3.2b (ENSCLMG00005000364)
Stickleback	MODERN SPECIES	8	ENSGACG00000013096	mef2b (ENSGACG00000013094)	tmem161a (ENSGACG00000013071) #7	slc25a42 (ENSGACG00000013066) #8	MAU2 (ENSGACG00000013058) #9	gatad2ab (ENSGACG00000013045) #10	yjefn3 (ENSGACG00000013039) #11	CILP2 (ENSGACG00000013036) #12	si:ch211-212d10.2 (ENSGACG00000013034) #13	ENSGACG00000013031 ##15	ENSGACG00000013029 ##15	midn (ENSGACG00000013027) #18	atp5f1d (ENSGACG00000013005) #19	CBARP (ENSGACG00000013001) #20	fstl3 (ENSGACG00000012995) #21	RNF126 (ENSGACG00000012987) #22	bsg (ENSGACG00000012970) #23	HCN2 (ENSGACG00000012964) #24	POLRMT (ENSGACG00000012957) #25	ENSGACG00000012951 ##30	ENSGACG00000012948 ##30	ENSGACG00000012935 ##30	ENSGACG00000012927	ENSGACG00000012902 #31	hsd11b1la (ENSGACG00000012884) #33	rgmd (ENSGACG00000012876) #34	celf5a (ENSGACG00000012870) #36	creb3l3a (ENSGACG00000012860) #37	rxfp3.2b (ENSGACG00000012856)	ENSGACG00000012793	hmg20b (ENSGACG00000012785)
Eupecaria_C	ANCESTRAL SPECIES	4	ENSGT00390000014856	ENSGT00940000165199	ENSGT00940000160699	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.b.p #15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.d ##30	ENSGT00910000144271.A.c.a #27	ENSGT00910000144271.A.c.b.b.b.b #28	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487 #33	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000177291 #35	ENSGT00940000154201.a.a.b.d #36	ENSGT00940000159261.d.a #37
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	3	ENSGT00390000014856	ENSGT00940000165199	ENSGT00940000160699	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.b.p #15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.d ##30	ENSGT00910000144271.A.c.a #27	ENSGT00910000144271.A.c.b.b.b.a #30	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487 #33	ENSGT00940000177291 #35	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000154201.a.a.b.d #36	ENSGT00940000159261.d.a #37
European seabass	MODERN SPECIES	17	tmem161a (ENSDLAG00005014167) #7	ENSDLAG00005014149 #8	MAU2 (ENSDLAG00005013801) #9	gatad2ab (ENSDLAG00005013744) #10	yjefn3 (ENSDLAG00005013739) #11	CILP2 (ENSDLAG00005013722) #12	si:ch211-212d10.2 (ENSDLAG00005013715) #13	ENSDLAG00005013698 #15	ENSDLAG00005034761 #15	midn (ENSDLAG00005026385) #18	atp5f1d (ENSDLAG00005013665) #19	CBARP (ENSDLAG00005013651) #20	ENSDLAG00005013645	fstl3 (ENSDLAG00005030374) #21	fstl3 (ENSDLAG00005029236) #21	ENSDLAG00005013607 #22	ENSDLAG00005028847 #23	bsg (ENSDLAG00005013581) #23	HCN2 (ENSDLAG00005013552) #24	POLRMT (ENSDLAG00005013349) #25	fgf22 (ENSDLAG00005013336) #26	ENSDLAG00005013319 #27	micos13 (ENSDLAG00005030603) #32	hsd11b1la (ENSDLAG00005033494) #33	ENSDLAG00005013250 #35	rgmd (ENSDLAG00005034969) #34	celf5a (ENSDLAG00005012223) #36	ENSDLAG00005012189 #37	ENSDLAG00005012187	ENSDLAG00005007255	hmg20b (ENSDLAG00005012176)
Large yellow croaker	MODERN SPECIES	489	ENSLCRG00005013820	mef2b (ENSLCRG00005013824)	tmem161a (ENSLCRG00005013831) #7	slc25a42 (ENSLCRG00005013834) #8	MAU2 (ENSLCRG00005013838) #9	gatad2ab (ENSLCRG00005013847) #10	yjefn3 (ENSLCRG00005013848) #11	CILP2 (ENSLCRG00005013849) #12	si:ch211-212d10.2 (ENSLCRG00005013850) #13	ENSLCRG00005013853 ##15	ENSLCRG00005013858 #15	midn (ENSLCRG00005013860) #18	atp5f1d (ENSLCRG00005013863) #19	CBARP (ENSLCRG00005013865) #20	fstl3 (ENSLCRG00005013867) #21	ENSLCRG00005013869 #22	bsg (ENSLCRG00005013876) #23	HCN2 (ENSLCRG00005013878) #24	POLRMT (ENSLCRG00005013881) #25	fgf22 (ENSLCRG00005013882) #26	ENSLCRG00005013885 ##30	ENSLCRG00005013887 #27	ENSLCRG00005013889 #30	ENSLCRG00005013894	ENSLCRG00005013895 #31	micos13 (ENSLCRG00005013896) #32	hsd11b1la (ENSLCRG00005013897) #33	rgmd (ENSLCRG00005013898) #34	celf5a (ENSLCRG00005013906) #36	creb3l3a (ENSLCRG00005014315) #37	rxfp3.2b (ENSLCRG00005014316)
Gilthead seabream	MODERN SPECIES	2	borcs8 (ENSSAUG00010005457)	ENSSAUG00010005461	mef2b (ENSSAUG00010005467)	tmem161a (ENSSAUG00010005475) #7	slc25a42 (ENSSAUG00010005490) #8	MAU2 (ENSSAUG00010005500) #9	gatad2ab (ENSSAUG00010005615) #10	yjefn3 (ENSSAUG00010005618) #11	CILP2 (ENSSAUG00010005623) #12	si:ch211-212d10.2 (ENSSAUG00010005627) #13	ENSSAUG00010005636 #15	midn (ENSSAUG00010005645) #18	ATP5D (ENSSAUG00010005650) #19	CBARP (ENSSAUG00010005653) #20	fstl3 (ENSSAUG00010005655) #21	RNF126 (ENSSAUG00010005662) #22	bsg (ENSSAUG00010005664) #23	HCN2 (ENSSAUG00010005670) #24	POLRMT (ENSSAUG00010005681) #25	fgf22 (ENSSAUG00010006124) #26	ENSSAUG00010006132 #28	ENSSAUG00010006152	ENSSAUG00010006158 #28	ENSSAUG00010006163 #28	ENSSAUG00010006170 #28	ENSSAUG00010006177 #28	ENSSAUG00010006191 #28	ENSSAUG00010006198	ENSSAUG00010006206 #31	micos13 (ENSSAUG00010006210) #32	hsd11b1la (ENSSAUG00010006216) #33
Ballan wrasse	MODERN SPECIES	45	ENSLBEG00000015774	mef2b (ENSLBEG00000015785)	tmem161a (ENSLBEG00000015816) #7	slc25a42 (ENSLBEG00000015887) #8	MAU2 (ENSLBEG00000015971) #9	gatad2ab (ENSLBEG00000016024) #10	yjefn3 (ENSLBEG00000016062) #11	CILP2 (ENSLBEG00000016088) #12	si:ch211-212d10.2 (ENSLBEG00000016132) #13	ENSLBEG00000016164 ##15	ENSLBEG00000016179 ##15	midn (ENSLBEG00000016212) #18	atp5f1d (ENSLBEG00000016254) #19	CBARP (ENSLBEG00000016278) #20	fstl3 (ENSLBEG00000016293) #21	RNF126 (ENSLBEG00000016310) #22	bsg (ENSLBEG00000016321) #23	HCN2 (ENSLBEG00000016351) #24	POLRMT (ENSLBEG00000016529) #25	fgf22 (ENSLBEG00000016553) #26	ENSLBEG00000016566 ##30	ENSLBEG00000016580 #27	ENSLBEG00000016597	ENSLBEG00000016606 #31	micos13 (ENSLBEG00000016628) #32	hsd11b1la (ENSLBEG00000016655) #33	rgmd (ENSLBEG00000016677) #34	ENSLBEG00000016696 #35	celf5a (ENSLBEG00000016733) #36	creb3l3a (ENSLBEG00000016806) #37	rxfp3.2b (ENSLBEG00000016833)
Tetraodontidae	ANCESTRAL SPECIES	5	ENSGT00940000160753	ENSGT00390000014856	ENSGT00940000165199	ENSGT00940000160699	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.c.a #27	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487 #33	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000177291 #35	ENSGT00940000154201.a.a.b.d #36	ENSGT00940000159261.d.a #37	ENSGT01030000234534.B.a.a.a.a.a.a	ENSGT00940000154662.c
Tetraodon	MODERN SPECIES		nr2c2ap (ENSTNIG00000013193)	rfxank (ENSTNIG00000013194)	borcs8 (ENSTNIG00000013195)	ENSTNIG00000001114	mef2b (ENSTNIG00000013196)	tmem161a (ENSTNIG00000013197) #7	slc25a42 (ENSTNIG00000013198) #8	MAU2 (ENSTNIG00000013199) #9	gatad2ab (ENSTNIG00000013200) #10	yjefn3 (ENSTNIG00000013201) #11	CILP2 (ENSTNIG00000013202) #12	midn (ENSTNIG00000003956) #18	atp5f1d (ENSTNIG00000004442) #19	CBARP (ENSTNIG00000010647) #20	fstl3 (ENSTNIG00000010646) #21	RNF126 (ENSTNIG00000010645) #22	bsg (ENSTNIG00000010644) #23	HCN2 (ENSTNIG00000010643) #24	POLRMT (ENSTNIG00000010642) #25	fgf22 (ENSTNIG00000010641) #26	ENSTNIG00000010640 #27	ENSTNIG00000001557	ENSTNIG00000010639	ENSTNIG00000010638 #31	micos13 (ENSTNIG00000010637) #32	hsd11b1la (ENSTNIG00000010636) #33	rgmd (ENSTNIG00000010635) #34	celf5a (ENSTNIG00000010634) #36	creb3l3a (ENSTNIG00000010633) #37	RXFP3 (ENSTNIG00000010632)	eef2b (ENSTNIG00000010631)
Fugu	MODERN SPECIES	12	borcs8 (ENSTRUG00000020808)	ENSTRUG00000020493	mef2b (ENSTRUG00000018156)	tmem161a (ENSTRUG00000018141) #7	slc25a42 (ENSTRUG00000018135) #8	MAU2 (ENSTRUG00000018128) #9	ENSTRUG00000029691	gatad2ab (ENSTRUG00000018122) #10	yjefn3 (ENSTRUG00000018119) #11	CILP2 (ENSTRUG00000018116) #12	si:ch211-212d10.2 (ENSTRUG00000018114) #13	midn (ENSTRUG00000018100) #18	atp5f1d (ENSTRUG00000018094) #19	CBARP (ENSTRUG00000027513) #20	fstl3 (ENSTRUG00000018075) #21	RNF126 (ENSTRUG00000021807) #22	bsg (ENSTRUG00000018068) #23	HCN2 (ENSTRUG00000018063) #24	POLRMT (ENSTRUG00000018040) #25	ENSTRUG00000028478	fgf22 (ENSTRUG00000020363) #26	ENSTRUG00000025513 #27	ENSTRUG00000017995	ENSTRUG00000030441 #31	micos13 (ENSTRUG00000024935) #32	hsd11b1la (ENSTRUG00000017980) #33	rgmd (ENSTRUG00000017971) #34	ENSTRUG00000028383 #35	celf5a (ENSTRUG00000017937) #36	ENSTRUG00000024401	creb3l3a (ENSTRUG00000017933) #37
Percomorphaceae_D	ANCESTRAL SPECIES	8	ENSGT00390000014856	ENSGT00940000165199	ENSGT00940000160699	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.b #15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.d ##30	ENSGT00910000144271.A.c.a #27	ENSGT00910000144271.A.c.b.a.a ##30	ENSGT00910000144271.A.c.b.a.b ##30	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487 #33	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000177291 #35	ENSGT00940000154201.a.a.b.d #36
Anabantaria	ANCESTRAL SPECIES	7	ENSGT00390000014856	ENSGT00940000165199	ENSGT00940000160699	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.b #15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.d ##30	ENSGT00910000144271.A.c.a #27	ENSGT00910000144271.A.c.b.a.a ##30	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487 #33	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000177291 #35	ENSGT00940000154201.a.a.b.d #36	ENSGT00940000159261.d.a #37
Anabantoidei	ANCESTRAL SPECIES	6	ENSGT00390000014856	ENSGT00940000165199	ENSGT00940000160699	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.b #15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.c.a #27	ENSGT00910000144271.A.c.b.a.a ##30	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487 #33	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000177291 #35	ENSGT00940000154201.a.a.b.d #36	ENSGT00940000159261.d.a #37	ENSGT01030000234534.B.a.a.a.a.a.a
Climbing perch	MODERN SPECIES	17	tmem161a (ENSATEG00000023927) #7	ENSATEG00000023936 #8	MAU2 (ENSATEG00000023946) #9	gatad2ab (ENSATEG00000023952) #10	yjefn3 (ENSATEG00000023961) #11	CILP2 (ENSATEG00000023964) #12	si:ch211-212d10.2 (ENSATEG00000027629) #13	ENSATEG00000023970 #15	ENSATEG00000023972 #15	ENSATEG00000025509 #15	ENSATEG00000023976 #15	midn (ENSATEG00000023978) #18	atp5f1d (ENSATEG00000023984) #19	CBARP (ENSATEG00000027455) #20	fstl3 (ENSATEG00000024005) #21	RNF126 (ENSATEG00000024009) #22	bsg (ENSATEG00000024015) #23	ENSATEG00000024018 #23	HCN2 (ENSATEG00000024020) #24	POLRMT (ENSATEG00000024025) #25	fgf22 (ENSATEG00000024034) #26	ENSATEG00000024038 #27	ENSATEG00000029083 ##30	ENSATEG00000024060 ##30	ENSATEG00000024072 ##30	ENSATEG00000024077	ENSATEG00000026779	ENSATEG00000025735 ##30	ENSATEG00000024081 ##30	ENSATEG00000029585	ENSATEG00000028698
Siamese fighting fish	MODERN SPECIES	15	ENSBSLG00000002037	mef2b (ENSBSLG00000002034)	tmem161a (ENSBSLG00000002024) #7	slc25a42 (ENSBSLG00000002019) #8	MAU2 (ENSBSLG00000002002) #9	gatad2ab (ENSBSLG00000001998) #10	yjefn3 (ENSBSLG00000001997) #11	CILP2 (ENSBSLG00000001993) #12	si:ch211-212d10.2 (ENSBSLG00000001992) #13	ENSBSLG00000001990 #15	ENSBSLG00000001988 #15	midn (ENSBSLG00000001981) #18	atp5f1d (ENSBSLG00000001979) #19	CBARP (ENSBSLG00000001977) #20	fstl3 (ENSBSLG00000001975) #21	RNF126 (ENSBSLG00000001973) #22	bsg (ENSBSLG00000001972) #23	HCN2 (ENSBSLG00000001964) #24	POLRMT (ENSBSLG00000001910) #25	fgf22 (ENSBSLG00000001898) #26	ENSBSLG00000001892 #27	ENSBSLG00000001890 #27	ENSBSLG00000001888	ENSBSLG00000001885	ENSBSLG00000001884 ##30	ENSBSLG00000001868 ##30	ENSBSLG00000001861	ENSBSLG00000001858	ENSBSLG00000001850 #31	micos13 (ENSBSLG00000001847) #32	hsd11b1la (ENSBSLG00000001798) #33
Zig-zag eel	MODERN SPECIES	18	borcs8 (ENSMAMG00000025610)	ENSMAMG00000018924	mef2b (ENSMAMG00000018935)	tmem161a (ENSMAMG00000018949) #7	ENSMAMG00000018962 #8	MAU2 (ENSMAMG00000018981) #9	gatad2ab (ENSMAMG00000019050) #10	yjefn3 (ENSMAMG00000019081) #11	CILP2 (ENSMAMG00000019109) #12	si:ch211-212d10.2 (ENSMAMG00000019120) #13	ENSMAMG00000019144 #15	midn (ENSMAMG00000019153) #18	atp5f1d (ENSMAMG00000019175) #19	CBARP (ENSMAMG00000019189) #20	fstl3 (ENSMAMG00000019214) #21	ENSMAMG00000019228 #22	bsg (ENSMAMG00000019255) #23	HCN2 (ENSMAMG00000019264) #24	POLRMT (ENSMAMG00000019284) #25	fgf22 (ENSMAMG00000019337) #26	ENSMAMG00000019348 ##30	ENSMAMG00000028414 #27	ENSMAMG00000019373 ##30	ENSMAMG00000019379	ENSMAMG00000019384 #31	micos13 (ENSMAMG00000019404) #32	hsd11b1la (ENSMAMG00000019411) #33	rgmd (ENSMAMG00000019430) #34	celf5a (ENSMAMG00000019440) #36	ENSMAMG00000019472 #37	ENSMAMG00000019478
Carangaria	ANCESTRAL SPECIES	7	ENSGT00390000014856	ENSGT00940000165199	ENSGT00940000160699	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.b #15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.d ##30	ENSGT00910000144271.A.c.a #27	ENSGT00910000144271.A.c.b.a.a ##30	ENSGT00910000144271.A.c.b.a.b ##30	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487 #33	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000177291 #35	ENSGT00940000154201.a.a.b.d #36
Carangaria_A	ANCESTRAL SPECIES	3	ENSGT00390000014856	ENSGT00940000165199	ENSGT00940000160699	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.b #15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.d ##30	ENSGT00910000144271.A.c.a #27	ENSGT00910000144271.A.c.b.a.a ##30	ENSGT00910000144271.A.c.b.a.b ##30	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487 #33	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000177291 #35	ENSGT00940000154201.a.a.b.d #36
Seriola	ANCESTRAL SPECIES	21	ENSGT00940000160699	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.b.m.b #15	ENSGT01030000234551.i.e.b.m.a #15	ENSGT01030000234551.i.e.b.n #15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.d ##30	ENSGT00910000144271.A.c.a #27	ENSGT00910000144271.A.c.b.a.a ##30	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487 #33	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000177291 #35	ENSGT00940000154201.a.a.b.d #36	ENSGT00940000159261.d.a #37
Greater amberjack	MODERN SPECIES	111								ENSSDUG00000004141	ENSSDUG00000004155 #15	ENSSDUG00000004161 #15	ENSSDUG00000004177 #15	midn (ENSSDUG00000004195) #18	atp5f1d (ENSSDUG00000004230) #19	CBARP (ENSSDUG00000004254) #20	fstl3 (ENSSDUG00000004287) #21	RNF126 (ENSSDUG00000004300) #22	bsg (ENSSDUG00000004336) #23	HCN2 (ENSSDUG00000004356) #24	POLRMT (ENSSDUG00000004410) #25	fgf22 (ENSSDUG00000004499) #26	ENSSDUG00000004524 ##30	ENSSDUG00000004533 #27	ENSSDUG00000004584 ##30	ENSSDUG00000004827 ##30	ENSSDUG00000004875	ENSSDUG00000004904 #31	micos13 (ENSSDUG00000004915) #32	hsd11b1la (ENSSDUG00000004933) #33	rgmd (ENSSDUG00000004947) #34	ENSSDUG00000004961 #35	celf5a (ENSSDUG00000004977) #36
Yellowtail amberjack	MODERN SPECIES	2828								si:ch211-212d10.2 (ENSSLDG00000010976) #13	ENSSLDG00000010954 #15	ENSSLDG00000010945 #15	ENSSLDG00000010929 #15	midn (ENSSLDG00000010894) #18	atp5f1d (ENSSLDG00000010860) #19	CBARP (ENSSLDG00000010838) #20	fstl3 (ENSSLDG00000010817) #21	RNF126 (ENSSLDG00000010791) #22	bsg (ENSSLDG00000010764) #23	HCN2 (ENSSLDG00000010735) #24	POLRMT (ENSSLDG00000010643) #25	fgf22 (ENSSLDG00000010611) #26	ENSSLDG00000010593 ##30	ENSSLDG00000010573 #27	ENSSLDG00000010062 ##30	ENSSLDG00000009958	ENSSLDG00000009946 #31	micos13 (ENSSLDG00000009936) #32	hsd11b1la (ENSSLDG00000009927) #33	rgmd (ENSSLDG00000009901) #34	celf5a (ENSSLDG00000009847) #36	creb3l3a (ENSSLDG00000009822) #37	rxfp3.2b (ENSSLDG00000009811)
Barramundi perch	MODERN SPECIES	221			ENSLCAG00010002956 #15	ENSLCAG00010002967 #15	ENSLCAG00010002969 #15	ENSLCAG00010002971 #15	ENSLCAG00010002973 #15	ENSLCAG00010002976 #14	ENSLCAG00010002978 #15	ENSLCAG00010002986 #15	midn (ENSLCAG00010002991) #18	atp5f1d (ENSLCAG00010002995) #19	ENSLCAG00010003011	CBARP (ENSLCAG00010003015) #20	fstl3 (ENSLCAG00010003018) #21	RNF126 (ENSLCAG00010003023) #22	bsg (ENSLCAG00010003032) #23	HCN2 (ENSLCAG00010003034) #24	POLRMT (ENSLCAG00010003036) #25	fgf22 (ENSLCAG00010003043) #26	ENSLCAG00010003044 ##30	ENSLCAG00010003045 ##30	ENSLCAG00010003048 ##30	ENSLCAG00010003049	ENSLCAG00010003050 ##30	ENSLCAG00010003052 ##30	ENSLCAG00010003058	ENSLCAG00010003119 #31	micos13 (ENSLCAG00010003121) #32	hsd11b1la (ENSLCAG00010003124) #33	rgmd (ENSLCAG00010003131) #34
Pleuronectoidei	ANCESTRAL SPECIES	29	ENSGT00390000014856	ENSGT00940000165199	ENSGT00940000160699	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.b #15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.c.a #27	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487 #33	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000177291 #35	ENSGT00940000154201.a.a.b.d #36	ENSGT00940000159261.d.a #37	ENSGT01030000234534.B.a.a.a.a.a.a	ENSGT00940000154662.c
Tongue sole	MODERN SPECIES	11	ENSCSEG00000002563	ENSCSEG00000002570	ENSCSEG00000002576	ZC3H3 (ENSCSEG00000002583)	ENSCSEG00000002604	mafaa (ENSCSEG00000002612)	atpaf1 (ENSCSEG00000002617)	RHPN1 (ENSCSEG00000002629)	si:ch211-212d10.2 (ENSCSEG00000002636) #13	CILP2 (ENSCSEG00000002642) #12	ENSCSEG00000002648 #15	midn (ENSCSEG00000002657) #18	atp5f1d (ENSCSEG00000002670) #19	CBARP (ENSCSEG00000002683) #20	fstl3 (ENSCSEG00000002692) #21	ENSCSEG00000002698 #22	bsg (ENSCSEG00000002708) #23	HCN2 (ENSCSEG00000002720) #24	POLRMT (ENSCSEG00000002734) #25	fgf22 (ENSCSEG00000002749) #26	ENSCSEG00000002753 #27	ENSCSEG00000002756	ENSCSEG00000002758 #31	micos13 (ENSCSEG00000002761) #32	hsd11b1la (ENSCSEG00000002768) #33	hsd11b1la (ENSCSEG00000002780) #33	rgmd (ENSCSEG00000002785) #34	ENSCSEG00000002798 #35	celf5a (ENSCSEG00000002800) #36	creb3l3a (ENSCSEG00000002809) #37	rxfp3.2b (ENSCSEG00000002825)
Turbot	MODERN SPECIES	3	nr2c2ap (ENSSMAG00000012414)	rfxank (ENSSMAG00000012403)	borcs8 (ENSSMAG00000012397)	ENSSMAG00000012394	tmem161a (ENSSMAG00000012340) #7	ENSSMAG00000012306 #8	MAU2 (ENSSMAG00000012219) #9	gatad2ab (ENSSMAG00000012151) #10	yjefn3 (ENSSMAG00000036477) #11	CILP2 (ENSSMAG00000012136) #12	si:ch211-212d10.2 (ENSSMAG00000012115) #13	midn (ENSSMAG00000012079) #18	atp5f1d (ENSSMAG00000012066) #19	CBARP (ENSSMAG00000035611) #20	fstl3 (ENSSMAG00000012028) #21	ENSSMAG00000027609 #22	bsg (ENSSMAG00000011924) #23	HCN2 (ENSSMAG00000011876) #24	POLRMT (ENSSMAG00000011851) #25	fgf22 (ENSSMAG00000011840) #26	ENSSMAG00000011829 #27	ENSSMAG00000011824	ENSSMAG00000033349 #31	micos13 (ENSSMAG00000035702) #32	hsd11b1la (ENSSMAG00000011781) #33	rgmd (ENSSMAG00000011765) #34	celf5a (ENSSMAG00000011707) #36	ENSSMAG00000011634 #37	ENSSMAG00000011623	hmg20b (ENSSMAG00000011561)	ENSSMAG00000011593
Ovalentaria	ANCESTRAL SPECIES	9	ENSGT00940000165199	ENSGT00940000160699	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.b #15	ENSGT01030000234551.i.e.a.a ##15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.d ##30	ENSGT00910000144271.A.c.a #27	ENSGT00910000144271.A.c.b.a.a ##30	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487 #33	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000177291 #35	ENSGT00940000154201.a.a.b.d #36	ENSGT00940000159261.d.a #37
Ovalentaria_B	ANCESTRAL SPECIES	8	ENSGT00940000165199	ENSGT00940000160699	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.b #15	ENSGT01030000234551.i.e.a.a ##15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.d ##30	ENSGT00910000144271.A.c.a #27	ENSGT00910000144271.A.c.b.a.a ##30	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487 #33	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000177291 #35	ENSGT00940000154201.a.a.b.d #36	ENSGT00940000159261.d.a #37
Pomacentridae	ANCESTRAL SPECIES	14	ENSGT00940000165199	ENSGT00940000160699	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.b #15	ENSGT01030000234551.i.e.a.a ##15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.d ##30	ENSGT00910000144271.A.c.a #27	ENSGT00910000144271.A.c.b.a.a ##30	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487 #33	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000154201.a.a.b.d #36	ENSGT00940000159261.d.a #37	ENSGT01030000234534.B.a.a.a.a.a.a
Pomacentridae_A	ANCESTRAL SPECIES		ENSGT00940000165199	ENSGT00940000160699	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.b #15	ENSGT01030000234551.i.e.a.a ##15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.d ##30	ENSGT00910000144271.A.c.a #27	ENSGT00910000144271.A.c.b.a.a ##30	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629.z #32	ENSGT00940000162487 #33	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000154201.a.a.b.d #36	ENSGT00940000159261.d.a #37	ENSGT01030000234534.B.a.a.a.a.a.a
Amphiprion	ANCESTRAL SPECIES	2	ENSGT00940000165199	ENSGT00940000160699	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.b #15	ENSGT01030000234551.i.e.a.a ##15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.d ##30	ENSGT00910000144271.A.c.a #27	ENSGT00910000144271.A.c.b.a.a ##30	ENSGT00940000162161.A.q	ENSGT00940000162161.A.r	ENSGT00950000182925.C.a.b.c #31	ENSGT00390000002629.z #32	ENSGT00940000162487 #33	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000154201.a.a.b.d #36	ENSGT00940000159261.d.a #37
Orange clownfish	MODERN SPECIES	11	ENSAPEG00000008571	mef2b (ENSAPEG00000008527)	tmem161a (ENSAPEG00000008483) #7	slc25a42 (ENSAPEG00000008468) #8	MAU2 (ENSAPEG00000008410) #9	gatad2ab (ENSAPEG00000008398) #10	yjefn3 (ENSAPEG00000008388) #11	CILP2 (ENSAPEG00000008322) #12	si:ch211-212d10.2 (ENSAPEG00000008286) #13	ENSAPEG00000008262 #15	ENSAPEG00000008253 ##15	midn (ENSAPEG00000008245) #18	atp5f1d (ENSAPEG00000008237) #19	CBARP (ENSAPEG00000008180) #20	fstl3 (ENSAPEG00000008113) #21	RNF126 (ENSAPEG00000008067) #22	bsg (ENSAPEG00000008045) #23	HCN2 (ENSAPEG00000008018) #24	POLRMT (ENSAPEG00000007949) #25	fgf22 (ENSAPEG00000007919) #26	ENSAPEG00000007901 ##30	ENSAPEG00000007882 #27	ENSAPEG00000007877 ##30	ENSAPEG00000007806	ENSAPEG00000007753	ENSAPEG00000007747 #31	micos13 (ENSAPEG00000007730) #32	hsd11b1la (ENSAPEG00000007702) #33	rgmd (ENSAPEG00000007684) #34	celf5a (ENSAPEG00000007649) #36	creb3l3a (ENSAPEG00000007603) #37
Clown anemonefish	MODERN SPECIES	1797								CILP2 (ENSAOCG00000023731) #12	si:ch211-212d10.2 (ENSAOCG00000023740) #13	ENSAOCG00000001738 #15	ENSAOCG00000023760 ##15	midn (ENSAOCG00000023777) #18	atp5f1d (ENSAOCG00000023788) #19	CBARP (ENSAOCG00000023800) #20	fstl3 (ENSAOCG00000023812) #21	RNF126 (ENSAOCG00000023821) #22	bsg (ENSAOCG00000023838) #23	ENSAOCG00000023850 #24
Spiny chromis	MODERN SPECIES	7	ENSAPOG00000003437	mef2b (ENSAPOG00000003469)	tmem161a (ENSAPOG00000003520) #7	slc25a42 (ENSAPOG00000003561) #8	MAU2 (ENSAPOG00000003623) #9	gatad2ab (ENSAPOG00000003671) #10	yjefn3 (ENSAPOG00000003679) #11	CILP2 (ENSAPOG00000003733) #12	si:ch211-212d10.2 (ENSAPOG00000003744) #13	ENSAPOG00000003761 #15	ENSAPOG00000003777 ##15	midn (ENSAPOG00000003794) #18	atp5f1d (ENSAPOG00000003824) #19	CBARP (ENSAPOG00000003837) #20	fstl3 (ENSAPOG00000003869) #21	RNF126 (ENSAPOG00000003898) #22	bsg (ENSAPOG00000003917) #23	HCN2 (ENSAPOG00000000086) #24	POLRMT (ENSAPOG00000003942) #25	fgf22 (ENSAPOG00000003951) #26	ENSAPOG00000004206 ##30	ENSAPOG00000004245 #27	ENSAPOG00000004331 ##30	ENSAPOG00000004341	ENSAPOG00000004360 #31	micos13 (ENSAPOG00000004377) #32	hsd11b1la (ENSAPOG00000004387) #33	rgmd (ENSAPOG00000000107) #34	celf5a (ENSAPOG00000004445) #36	creb3l3a (ENSAPOG00000004457) #37	rxfp3.2b (ENSAPOG00000000932)
Bicolor damselfish	MODERN SPECIES	269	borcs8 (ENSSPAG00000017982)	ENSSPAG00000018015	mef2b (ENSSPAG00000018028)	tmem161a (ENSSPAG00000018074) #7	slc25a42 (ENSSPAG00000018145) #8	MAU2 (ENSSPAG00000018202) #9	gatad2ab (ENSSPAG00000018313) #10	yjefn3 (ENSSPAG00000018346) #11	CILP2 (ENSSPAG00000018356) #12	si:ch211-212d10.2 (ENSSPAG00000018382) #13	ENSSPAG00000018392 #15	midn (ENSSPAG00000018411) #18	atp5f1d (ENSSPAG00000018441) #19	CBARP (ENSSPAG00000018458) #20	fstl3 (ENSSPAG00000018495) #21	RNF126 (ENSSPAG00000018511) #22	bsg (ENSSPAG00000018543) #23	HCN2 (ENSSPAG00000018584) #24	POLRMT (ENSSPAG00000018740) #25	fgf22 (ENSSPAG00000018819) #26	ENSSPAG00000018828 ##30	ENSSPAG00000018844 #27	ENSSPAG00000018849	ENSSPAG00000018859 #31	micos13 (ENSSPAG00000018870) #32	hsd11b1la (ENSSPAG00000018883) #33	rgmd (ENSSPAG00000018900) #34	ENSSPAG00000018909 #35
Cichlidae	ANCESTRAL SPECIES	17	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.b #15	ENSGT01030000234551.i.e.a.a.d.a ##15	ENSGT01030000234551.i.e.a.a.d.b ##15	ENSGT01030000234551.i.e.a.a.c ##15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.d.b ##30	ENSGT00910000144271.A.d.a.b ##30	ENSGT00910000144271.A.c.b.a.a.e.a.a ##30	ENSGT00910000144271.A.c.b.a.a.e.a.b ##30	ENSGT00910000144271.A.c.b.a.b ##30	ENSGT00910000144271.A.c.b.a.a.f.b ##30	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487.c #33	ENSGT00940000162487.d #33
Pseudocrenilabrinae	ANCESTRAL SPECIES	10	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.b.e #15	ENSGT01030000234551.i.e.a.a.d.a.a ##15	ENSGT01030000234551.i.e.a.a.d.b ##15	ENSGT01030000234551.i.e.a.a.c ##15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.d.b ##30	ENSGT00910000144271.A.d.a.b ##30	ENSGT00910000144271.A.c.b.a.a.e.a.a ##30	ENSGT00910000144271.A.c.b.a.a.e.a.b ##30	ENSGT00910000144271.A.c.b.a.b.b ##30	ENSGT00940000163484.t.b.b.a.a.b.b	ENSGT00910000144271.A.c.b.a.a.f.a.a.b ##30	ENSGT00910000144271.A.d.a.a ##30	ENSGT00910000144271.A.c.b.a.a.f.a.b ##30	ENSGT00940000166922	ENSGT00940000154831
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	26	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.b.e #15	ENSGT01030000234551.i.e.a.a.d.a.a ##15	ENSGT01030000234551.i.e.a.a.d.b.a ##15	ENSGT01030000234551.i.e.a.a.d.b.b ##15	ENSGT01030000234551.i.e.a.a.c ##15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.d.a.b.b ##30	ENSGT00910000144271.A.d.b ##30	ENSGT00910000144271.A.d.a.b.a ##30	ENSGT00910000144271.A.c.b.a.a.e.a.a ##30	ENSGT00910000144271.A.c.b.a.a.e.a.b ##30	ENSGT00910000144271.A.c.b.a.b.b ##30	ENSGT00940000163484.t.b.b.a.a.b.b	ENSGT00910000144271.A.c.b.a.a.f.a.a.b ##30	ENSGT00910000144271.A.d.a.a ##30	ENSGT00910000144271.A.c.b.a.a.f.a.b ##30	ENSGT00940000166922
Haplochromini	ANCESTRAL SPECIES	16	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.b.e #15	ENSGT01030000234551.i.e.a.a.d.a.a ##15	ENSGT01030000234551.i.e.a.a.d.b.a ##15	ENSGT01030000234551.i.e.a.a.d.b.b ##15	ENSGT01030000234551.i.e.a.a.c ##15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.d.a.b.b ##30	ENSGT00910000144271.A.d.b ##30	ENSGT00910000144271.A.d.a.b.a ##30	ENSGT00910000144271.A.c.b.a.a.e.a.a ##30	ENSGT00910000144271.A.c.b.a.a.e.a.b ##30	ENSGT00910000144271.A.c.b.a.b.b ##30	ENSGT00940000163484.t.b.b.a.a.b.b	ENSGT00910000144271.A.c.b.a.a.f.a.a.b ##30	ENSGT00910000144271.A.d.a.a ##30	ENSGT00910000144271.A.c.b.a.a.f.a.b ##30	ENSGT00940000166922
Burton s mouthbrooder	MODERN SPECIES	307	tmem161a (ENSHBUG00000010506) #7	slc25a42 (ENSHBUG00000010466) #8	MAU2 (ENSHBUG00000010427) #9	gatad2ab (ENSHBUG00000010358) #10	yjefn3 (ENSHBUG00000010318) #11	CILP2 (ENSHBUG00000010309) #12	si:ch211-212d10.2 (ENSHBUG00000010297) #13	ENSHBUG00000010276 #15	ENSHBUG00000010268 ##15	ENSHBUG00000010202 ##15	ENSHBUG00000000261 ##15	midn (ENSHBUG00000000259) #18	atp5f1d (ENSHBUG00000010138) #19	CBARP (ENSHBUG00000010120) #20	fstl3 (ENSHBUG00000010104) #21	RNF126 (ENSHBUG00000010085) #22	bsg (ENSHBUG00000010032) #23	HCN2 (ENSHBUG00000010015) #24	POLRMT (ENSHBUG00000010005) #25	fgf22 (ENSHBUG00000009990) #26	ENSHBUG00000009983 ##30	ENSHBUG00000000940 ##30	ENSHBUG00000009898 ##30	ENSHBUG00000009889 ##30	ENSHBUG00000009863 ##30	ENSHBUG00000009858 ##30	ENSHBUG00000009850	ENSHBUG00000009842 ##30	ENSHBUG00000009827 ##30	ENSHBUG00000009803 ##30	ENSHBUG00000009785
Haplochromini_A	ANCESTRAL SPECIES	15	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.b.e #15	ENSGT01030000234551.i.e.a.a.d.a.a ##15	ENSGT01030000234551.i.e.a.a.d.b.a ##15	ENSGT01030000234551.i.e.a.a.d.b.b ##15	ENSGT01030000234551.i.e.a.a.c ##15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.d.a.b.b ##30	ENSGT00910000144271.A.d.a.b.a ##30	ENSGT00910000144271.A.c.b.a.a.e.a.a ##30	ENSGT00910000144271.A.c.b.a.a.e.a.b ##30	ENSGT00910000144271.A.c.b.a.b.b ##30	ENSGT00940000163484.t.b.b.a.a.b.b	ENSGT00910000144271.A.c.b.a.a.f.a.a.b ##30	ENSGT00910000144271.A.d.a.a ##30	ENSGT00910000144271.A.c.b.a.a.f.a.b ##30	ENSGT00940000166922	ENSGT00940000154831
Haplochromini_B	ANCESTRAL SPECIES	10	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.b.e #15	ENSGT01030000234551.i.e.a.a.d.a.a ##15	ENSGT01030000234551.i.e.a.a.d.b.a ##15	ENSGT01030000234551.i.e.a.a.d.b.b ##15	ENSGT01030000234551.i.e.a.a.c ##15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.d.a.b.b ##30	ENSGT00910000144271.A.d.a.b.a ##30	ENSGT00910000144271.A.c.b.a.a.e.a.a ##30	ENSGT00910000144271.A.c.b.a.a.e.a.b ##30	ENSGT00910000144271.A.c.b.a.b.b ##30	ENSGT00940000163484.t.b.b.a.a.b.b	ENSGT00910000144271.A.c.b.a.a.f.a.a.b ##30	ENSGT00910000144271.A.d.a.a ##30	ENSGT00910000144271.A.c.b.a.a.f.a.b ##30	ENSGT00940000166922	ENSGT00940000154831
Zebra mbuna	MODERN SPECIES	1105	MAU2 (ENSMZEG00005010385) #9	gatad2ab (ENSMZEG00005010348) #10	yjefn3 (ENSMZEG00005010325) #11	CILP2 (ENSMZEG00005010305) #12	si:ch211-212d10.2 (ENSMZEG00005010289) #13	ENSMZEG00005010279	ENSMZEG00005010272 #15	ENSMZEG00005010259 ##15	ENSMZEG00005010248 ##15	ENSMZEG00005010236 ##15	ENSMZEG00005010217 ##15	midn (ENSMZEG00005010194) #18	atp5f1d (ENSMZEG00005010180) #19	CBARP (ENSMZEG00005010159) #20	fstl3 (ENSMZEG00005010127) #21	RNF126 (ENSMZEG00005010095) #22	bsg (ENSMZEG00005010074) #23	HCN2 (ENSMZEG00005009995) #24	POLRMT (ENSMZEG00005009932) #25	fgf22 (ENSMZEG00005009912) #26	ENSMZEG00005009860 ##30	ENSMZEG00005009814 ##30	ENSMZEG00005009797 ##30	ENSMZEG00005009746 ##30	ENSMZEG00005009718	ENSMZEG00005009702 ##30	ENSMZEG00005009672 ##30	ENSMZEG00005009609 ##30	ENSMZEG00005009588	ENSMZEG00005009489 ##30	bend5 (ENSMZEG00005009448)
Eastern happy	MODERN SPECIES	14	tmem161a (ENSACLG00000004706) #7	slc25a42 (ENSACLG00000004664) #8	MAU2 (ENSACLG00000004571) #9	gatad2ab (ENSACLG00000004521) #10	yjefn3 (ENSACLG00000004422) #11	CILP2 (ENSACLG00000004394) #12	si:ch211-212d10.2 (ENSACLG00000004384) #13	ENSACLG00000004365 #15	ENSACLG00000004346 ##15	ENSACLG00000004337 ##15	ENSACLG00000004325 ##15	midn (ENSACLG00000003950) #18	atp5f1d (ENSACLG00000003934) #19	CBARP (ENSACLG00000003913) #20	fstl3 (ENSACLG00000003890) #21	RNF126 (ENSACLG00000003847) #22	ENSACLG00000003832 #23	bsg (ENSACLG00000003823) #23	HCN2 (ENSACLG00000003818) #24	POLRMT (ENSACLG00000003766) #25	fgf22 (ENSACLG00000003305) #26	ENSACLG00000003293 ##30	ENSACLG00000003286 ##30	ENSACLG00000003283 ##30	ENSACLG00000003266 ##30	ENSACLG00000003257 ##30	ENSACLG00000003248	ENSACLG00000003147 ##30	ENSACLG00000003114 ##30	ENSACLG00000003099 ##30	ENSACLG00000003037
P. nyererei	MODERN SPECIES	351	slc25a42 (ENSPNYG00000020240) #8	MAU2 (ENSPNYG00000020286) #9	gatad2ab (ENSPNYG00000020347) #10	yjefn3 (ENSPNYG00000020393) #11	CILP2 (ENSPNYG00000020439) #12	si:ch211-212d10.2 (ENSPNYG00000020448) #13	ENSPNYG00000020462 #15	ENSPNYG00000020500 ##15	ENSPNYG00000020547 ##15	ENSPNYG00000020561 ##15	ENSPNYG00000020612 ##15	midn (ENSPNYG00000020649) #18	atp5f1d (ENSPNYG00000020668) #19	CBARP (ENSPNYG00000020688) #20	fstl3 (ENSPNYG00000020710) #21	RNF126 (ENSPNYG00000020724) #22	bsg (ENSPNYG00000020755) #23	HCN2 (ENSPNYG00000020768) #24	POLRMT (ENSPNYG00000020790) #25	fgf22 (ENSPNYG00000020815) #26	ENSPNYG00000020860 ##30	ENSPNYG00000020962 ##30	ENSPNYG00000021257 ##30	ENSPNYG00000021309 ##30	ENSPNYG00000021358 ##30	ENSPNYG00000021399	ENSPNYG00000021475 ##30	ENSPNYG00000021585 ##30	ENSPNYG00000021605	ENSPNYG00000021664	faf1 (ENSPNYG00000021679)
Lyretail cichlid	MODERN SPECIES	361	ENSNBRG00000023218	tmem161a (ENSNBRG00000023231) #7	slc25a42 (ENSNBRG00000023312) #8	MAU2 (ENSNBRG00000023326) #9	gatad2ab (ENSNBRG00000023349) #10	yjefn3 (ENSNBRG00000023366) #11	CILP2 (ENSNBRG00000023381) #12	si:ch211-212d10.2 (ENSNBRG00000023395) #13	ENSNBRG00000023405 #15	ENSNBRG00000023418 ##15	ENSNBRG00000023435 ##15	midn (ENSNBRG00000023452) #18	atp5f1d (ENSNBRG00000023463) #19	CBARP (ENSNBRG00000023473) #20	fstl3 (ENSNBRG00000023499) #21	RNF126 (ENSNBRG00000023507) #22	bsg (ENSNBRG00000023510) #23	HCN2 (ENSNBRG00000023521) #24	POLRMT (ENSNBRG00000023530) #25	fgf22 (ENSNBRG00000023548) #26	ENSNBRG00000023565 ##30	ENSNBRG00000023618 ##30	ENSNBRG00000023656 ##30	ENSNBRG00000023672 ##30	ENSNBRG00000023689	ENSNBRG00000023699 ##30	ENSNBRG00000023719 ##30	faf1 (ENSNBRG00000023733)	dmrta2 (ENSNBRG00000023755)	ENSNBRG00000023764	AGBL4 (ENSNBRG00000023778)
Nile tilapia	MODERN SPECIES	14	ENSONIG00000034927	tmem161a (ENSONIG00000002464) #7	slc25a42 (ENSONIG00000002461) #8	MAU2 (ENSONIG00000002458) #9	gatad2ab (ENSONIG00000002454) #10	yjefn3 (ENSONIG00000002450) #11	CILP2 (ENSONIG00000002448) #12	si:ch211-212d10.2 (ENSONIG00000002447) #13	ENSONIG00000002442 #15	ENSONIG00000002441 ##15	ENSONIG00000002433 ##15	midn (ENSONIG00000040836) #18	atp5f1d (ENSONIG00000002428) #19	CBARP (ENSONIG00000002423) #20	fstl3 (ENSONIG00000039200) #21	RNF126 (ENSONIG00000002419) #22	bsg (ENSONIG00000002415) #23	HCN2 (ENSONIG00000002411) #24	POLRMT (ENSONIG00000002405) #25	fgf22 (ENSONIG00000002404) #26	ENSONIG00000002397 ##30	ENSONIG00000020200 ##30	ENSONIG00000002390 ##30	ENSONIG00000037251	ENSONIG00000002381 ##30	ENSONIG00000002378 ##30	ENSONIG00000038950	ENSONIG00000002375 ##30	ENSONIG00000002371	faf1 (ENSONIG00000002366)	dmrta2 (ENSONIG00000002365)
Midas cichlid	MODERN SPECIES	551										ENSACIG00000016313	ENSACIG00000016295 ##15	midn (ENSACIG00000016278) #18	atp5f1d (ENSACIG00000016267) #19	CBARP (ENSACIG00000016251) #20	fstl3 (ENSACIG00000016219) #21	RNF126 (ENSACIG00000016197) #22	bsg (ENSACIG00000016153) #23	HCN2 (ENSACIG00000016123) #24	POLRMT (ENSACIG00000016078) #25	fgf22 (ENSACIG00000016062) #26	ENSACIG00000016048 ##30	ENSACIG00000015981 ##30	ENSACIG00000015920 ##30	ENSACIG00000015858 ##30	ENSACIG00000015826 ##30	ENSACIG00000015673 ##30	ENSACIG00000015606 ##30	ENSACIG00000015563	ENSACIG00000015517 #31	micos13 (ENSACIG00000015450) #32	hsd11b1la (ENSACIG00000015431) #33
Atherinomorphae	ANCESTRAL SPECIES	7	ENSGT00940000165199	ENSGT00940000160699	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.b #15	ENSGT01030000234551.i.e.a.a ##15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.c.a #27	ENSGT00910000144271.A.c.b.a.a ##30	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487 #33	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000177291 #35	ENSGT00940000154201.a.a.b.d #36	ENSGT00940000159261.d.a #37	ENSGT01030000234534.B.a.a.a.a.a.a
Cyprinodontiformes	ANCESTRAL SPECIES	7	ENSGT00940000165199	ENSGT00940000160699	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.b #15	ENSGT01030000234551.i.e.a.a ##15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.c.a #27	ENSGT00910000144271.A.c.b.a.a.b.a ##30	ENSGT00910000144271.A.c.b.a.a.a ##30	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487 #33	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000154201.a.a.b.d #36	ENSGT00940000159261.d.a #37	ENSGT01030000234534.B.a.a.a.a.a.a
Aplocheiloidei	ANCESTRAL SPECIES	3	ENSGT00390000014856	ENSGT00940000165199	ENSGT00940000160699	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.b #15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.c.a #27	ENSGT00910000144271.A.c.b.a.a.a ##30	ENSGT00910000144271.A.c.b.a.a.b.a ##30	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487 #33	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000154201.a.a.b.d #36	ENSGT00940000159261.d.a #37	ENSGT01030000234534.B.a.a.a.a.a.a
Mangrove rivulus	MODERN SPECIES	8	gatad2ab (ENSKMAG00000005052) #10	yjefn3 (ENSKMAG00000005026) #11	CILP2 (ENSKMAG00000005007) #12	si:ch211-212d10.2 (ENSKMAG00000004999) #13	ENSKMAG00000004915 #15	ENSKMAG00000004887 #15	ENSKMAG00000004867 #15	ENSKMAG00000004832 ##15	ENSKMAG00000004805 ##15	ENSKMAG00000004795 ##15	ENSKMAG00000004759 #15	midn (ENSKMAG00000004733) #18	atp5f1d (ENSKMAG00000004709) #19	CBARP (ENSKMAG00000004683) #20	fstl3 (ENSKMAG00000004667) #21	RNF126 (ENSKMAG00000004625) #22	bsg (ENSKMAG00000004533) #23	ENSKMAG00000004469 #24	POLRMT (ENSKMAG00000004426) #25	fgf22 (ENSKMAG00000004410) #26	ENSKMAG00000004198 ##30	ENSKMAG00000004125 ##30	ENSKMAG00000004083 ##30	ENSKMAG00000003926 ##30	ENSKMAG00000003901	ENSKMAG00000003857 #31	micos13 (ENSKMAG00000003874) #32	hsd11b1la (ENSKMAG00000003841) #33	hsd11b1la (ENSKMAG00000003827) #33	rgmd (ENSKMAG00000003809) #34	celf5a (ENSKMAG00000003744) #36
Turquoise killifish	MODERN SPECIES	1626	NCAN (ENSNFUG00015023728)	COL8A1B (ENSNFUG00015023724)	Nfu_g_1_016063 (ENSNFUG00015023720) #8	MAU2 (ENSNFUG00015023708) #9	gatad2ab (ENSNFUG00015023699) #10	YJEFN3 (ENSNFUG00015023696) #11	CILP2 (ENSNFUG00015023692) #12	Nfu_g_1_016059 (ENSNFUG00015023689) #13	ENSNFUG00015023685 #15	ENSNFUG00015023682	midn (ENSNFUG00015023675) #18	ATP5D (ENSNFUG00015023668) #19	C22H19ORF26 (ENSNFUG00015023664) #20	FSTL3 (ENSNFUG00015023661) #21	CABZ01049117.1 (ENSNFUG00015023659)	RNF126 (ENSNFUG00015023655) #22	BSG (ENSNFUG00015023650) #23	ENSNFUG00015023648	ENSNFUG00015023647	HCN2 (ENSNFUG00015023631) #24	POLRMT (ENSNFUG00015023601) #25	fgf22 (ENSNFUG00015023589) #26	ENSNFUG00015023581 #27	ENSNFUG00015023576 ##30	ENSNFUG00015023573 ##30	SPINB (ENSNFUG00015023568) #31	C22H19ORF70 (ENSNFUG00015023564) #32	HSD11B1L (ENSNFUG00015023562) #33	rgmd (ENSNFUG00015023556) #34	celf5a (ENSNFUG00015023550) #36	EEF2 (ENSNFUG00015023495)
Cyprinodontoidei	ANCESTRAL SPECIES	10	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.b #15	ENSGT01030000234551.i.e.a.b ##15	ENSGT00940000178278 #14	ENSGT01030000234551.i.e.a.a ##15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.c.a #27	ENSGT00910000144271.A.c.b.a.a.b.a ##30	ENSGT00910000144271.A.c.b.a.a.a ##30	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487.g #33	ENSGT00940000162487.h #33	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000154201.a.a.b.d #36	ENSGT00940000159261.d.a #37
NAME_4	ANCESTRAL SPECIES	110	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.b #15	ENSGT01030000234551.i.e.a.b ##15	ENSGT00940000178278 #14	ENSGT01030000234551.i.e.a.a ##15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.c.a #27
Mummichog	MODERN SPECIES	2290	mef2b (ENSFHEG00000021846)	tmem161a (ENSFHEG00000021793) #7	slc25a42 (ENSFHEG00000021781) #8	MAU2 (ENSFHEG00000021753) #9	gatad2ab (ENSFHEG00000021662) #10	yjefn3 (ENSFHEG00000021569) #11	CILP2 (ENSFHEG00000021559) #12	ENSFHEG00000021505 #15	ENSFHEG00000021499 ##15	ENSFHEG00000021490 ##15	midn (ENSFHEG00000021487) #18	atp5f1d (ENSFHEG00000021465) #19	CBARP (ENSFHEG00000021441) #20	fstl3 (ENSFHEG00000021369) #21	ENSFHEG00000021366 #21	RNF126 (ENSFHEG00000021361) #22	bsg (ENSFHEG00000021321) #23	HCN2 (ENSFHEG00000021278) #24	POLRMT (ENSFHEG00000021239) #25	fgf22 (ENSFHEG00000021216) #26	ENSFHEG00000021166 #27
Sheepshead minnow	MODERN SPECIES	1060															fstl3 (ENSCVAG00000006004) #21	RNF126 (ENSCVAG00000006000) #22	bsg (ENSCVAG00000005991) #23	HCN2 (ENSCVAG00000005979) #24	POLRMT (ENSCVAG00000005949) #25	fgf22 (ENSCVAG00000005871) #26	ENSCVAG00000005866 #27	ENSCVAG00000005779 ##30	ENSCVAG00000005770 ##30
Poeciliinae	ANCESTRAL SPECIES	7	ENSGT00940000160699	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.b #15	ENSGT01030000234551.i.e.a.b ##15	ENSGT01030000234551.i.e.a.a ##15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.c.a #27	ENSGT00910000144271.A.c.b.a.a.b.a ##30	ENSGT00910000144271.A.c.b.a.a.a.b ##30	ENSGT00910000144271.A.c.b.a.a.b.b ##30	ENSGT00910000144271.A.c.b.a.a.a.a.b ##30	ENSGT00910000144271.A.c.b.a.a.a.a.a ##30	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487.g #33	ENSGT00940000162487.h #33
Poecilia	ANCESTRAL SPECIES	1	ENSGT00940000160699	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.b #15	ENSGT01030000234551.i.e.a.b ##15	ENSGT01030000234551.i.e.a.a ##15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.c.a #27	ENSGT00910000144271.A.c.b.a.a.b.a ##30	ENSGT00910000144271.A.c.b.a.a.b.b ##30	ENSGT00910000144271.A.c.b.a.a.a.a.b ##30	ENSGT00910000144271.A.c.b.a.a.a.a.a ##30	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487.g #33	ENSGT00940000162487.h #33	ENSGT00950000183112.b.a.a.a #34
NAME_6	ANCESTRAL SPECIES	97	ENSGT00390000000672.a.a #7	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00390000007227.b.w #11	ENSGT00390000007227.b.x #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i.e.b #15	ENSGT01030000234551.i.e.a.b ##15	ENSGT01030000234551.i.e.a.a ##15	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00910000144271.A.c.a #27	ENSGT00910000144271.A.c.b.a.a.b.a ##30	ENSGT00910000144271.A.c.b.a.a.a.b ##30	ENSGT00910000144271.A.c.b.a.a.a.a.b ##30	ENSGT00910000144271.A.c.b.a.a.a.a.a ##30	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487.g #33	ENSGT00940000162487.h #33	ENSGT00950000183112.b.a.a.a #34
Amazon molly	DUPLICATION
Amazon molly	MODERN SPECIES	504	gatad2ab (ENSPFOG00000002553) #10	MAU2 (ENSPFOG00000002855) #9	gatad2ab (ENSPFOG00000003089) #10	yjefn3 (ENSPFOG00000003143) #11	ENSPFOG00000003133	CILP2 (ENSPFOG00000003206) #12	yjefn3 (ENSPFOG00000023381) #11	si:ch211-212d10.2 (ENSPFOG00000003323) #13	ENSPFOG00000003327 #15	ENSPFOG00000003400 ##15	ENSPFOG00000003457 ##15	midn (ENSPFOG00000003571) #18	atp5f1d (ENSPFOG00000003688) #19	CBARP (ENSPFOG00000003720) #20	fstl3 (ENSPFOG00000003789) #21	RNF126 (ENSPFOG00000003851) #22	ENSPFOG00000004099
Amazon molly	MODERN SPECIES	45																RNF126 (ENSPFOG00000001225) #22	bsg (ENSPFOG00000001048) #23
Sailfin molly	DUPLICATION
Sailfin molly	MODERN SPECIES	2789															ENSPLAG00000007529	RNF126 (ENSPLAG00000007491) #22
Sailfin molly	MODERN SPECIES	2195																RNF126 (ENSPLAG00000008129) #22	bsg (ENSPLAG00000008141) #23	ENSPLAG00000008449 #24
Guppy	MODERN SPECIES	456	tmem161a (ENSPREG00000007020) #7	slc25a42 (ENSPREG00000007062) #8	MAU2 (ENSPREG00000007092) #9	ENSPREG00000007161	gatad2ab (ENSPREG00000007174) #10	yjefn3 (ENSPREG00000007211) #11	CILP2 (ENSPREG00000007239) #12	si:ch211-212d10.2 (ENSPREG00000007257) #13	ENSPREG00000007278 #15	ENSPREG00000007406 ##15	ENSPREG00000007425 ##15	midn (ENSPREG00000007434) #18	atp5f1d (ENSPREG00000007462) #19	CBARP (ENSPREG00000007484) #20	fstl3 (ENSPREG00000007505) #21	RNF126 (ENSPREG00000007525) #22	bsg (ENSPREG00000007565) #23	HCN2 (ENSPREG00000007616) #24	POLRMT (ENSPREG00000007650) #25	fgf22 (ENSPREG00000007726) #26	ENSPREG00000007747 #27	ENSPREG00000007767 ##30	ENSPREG00000007777 ##30	ENSPREG00000007790	ENSPREG00000007801 ##30	ENSPREG00000007881 ##30	ENSPREG00000008130	lto1 (ENSPREG00000008144)	ENSPREG00000008153 #31	micos13 (ENSPREG00000008162) #32	hsd11b1la (ENSPREG00000008181) #33
Platyfish	MODERN SPECIES	23	mef2b (ENSXMAG00000021241)	tmem161a (ENSXMAG00000012265) #7	slc25a42 (ENSXMAG00000012286) #8	MAU2 (ENSXMAG00000012294) #9	gatad2ab (ENSXMAG00000012323) #10	yjefn3 (ENSXMAG00000028715) #11	CILP2 (ENSXMAG00000012353) #12	si:ch211-212d10.2 (ENSXMAG00000027766) #13	ENSXMAG00000012363 #15	ENSXMAG00000012368 ##15	ENSXMAG00000012370 ##15	midn (ENSXMAG00000012420) #18	atp5f1d (ENSXMAG00000025998) #19	CBARP (ENSXMAG00000029070) #20	fstl3 (ENSXMAG00000012436) #21	RNF126 (ENSXMAG00000012441) #22	bsg (ENSXMAG00000012451) #23	HCN2 (ENSXMAG00000007411) #24	POLRMT (ENSXMAG00000012464) #25	fgf22 (ENSXMAG00000012475) #26	ENSXMAG00000029573 #27	ENSXMAG00000012481 ##30	ENSXMAG00000012483 ##30	ENSXMAG00000025442 ##30	ENSXMAG00000012485 ##30	ENSXMAG00000012492	ENSXMAG00000027774 #31	micos13 (ENSXMAG00000027033) #32	hsd11b1la (ENSXMAG00000024190) #33	hsd11b1la (ENSXMAG00000012575) #33	rgmd (ENSXMAG00000012585) #34
Oryzias	ANCESTRAL SPECIES	5	ENSGT00940000156600.f	ENSGT00940000157634.c	ENSGT01030000234559.a.b	ENSGT01030000234558.C.p	ENSGT00940000164993.h	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721.c.a #26	ENSGT00910000144271.A.c.b.a.a.d ##30	ENSGT00940000181909	ENSGT00910000144271.A.c.b.a.a.c.b ##30	ENSGT00940000162161.A	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487 #33	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000177291 #35	ENSGT00940000154201.a.a.b.d #36	ENSGT00940000159261.d.a #37
Oryzias_a	ANCESTRAL SPECIES	14	ENSGT00940000156600.f	ENSGT00940000157634.c	ENSGT01030000234559.a.b	ENSGT01030000234558.C.p	ENSGT00940000164993.h	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721.d #26	ENSGT00910000144271.A.c.b.a.a.d.a ##30	ENSGT00910000144271.A.c.b.a.a.c.b.b.a.a.a ##30	ENSGT00940000181909	ENSGT00910000144271.A.c.b.a.a.c.b.a ##30	ENSGT00940000162161.A	ENSGT00940000162487.i #33	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00940000162487.j #33	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000177291 #35
Chinese medaka	MODERN SPECIES	867	ENSOSIG00000023959	ENSOSIG00000023955	ENSOSIG00000023952	st6galnac5b (ENSOSIG00000023950)	ptgfr (ENSOSIG00000023948)	colgalt2b (ENSOSIG00000023945)	ENSOSIG00000023937	npl (ENSOSIG00000023934)	sec22bb (ENSOSIG00000023930)	slc35a3a (ENSOSIG00000023922)	FAM78B (ENSOSIG00000023921)	rex1bd (ENSOSIG00000023920)	atp5f1d (ENSOSIG00000023918) #19	ENSOSIG00000023917 #20	fstl3 (ENSOSIG00000023916) #21	RNF126 (ENSOSIG00000023913) #22	bsg (ENSOSIG00000023912) #23	HCN2 (ENSOSIG00000023909) #24	POLRMT (ENSOSIG00000023904) #25	ENSOSIG00000023895
Japanese Medaka HdrR	MODERN SPECIES	18	st6galnac5b (ENSORLG00000004027)	ptgfr (ENSORLG00000024637)	ENSORLG00000024241	colgalt2b (ENSORLG00000029008)	ENSORLG00000004077	ENSORLG00000004064	npl (ENSORLG00000004100)	sec22bb (ENSORLG00000004111)	ENSORLG00000029931	ENSORLG00000004154	slc35a3a (ENSORLG00000004194)	FAM78B (ENSORLG00000004207)	rex1bd (ENSORLG00000024616)	atp5f1d (ENSORLG00000029483) #19	ENSORLG00000025749 #20	RNF126 (ENSORLG00000004305) #22	HCN2 (ENSORLG00000004318) #24	ENSORLG00000004329 #25	fgf22 (ENSORLG00000030635) #26	ENSORLG00000004363 ##30	ENSORLG00000026990	ENSORLG00000004423 ##30	ENSORLG00000004488 ##30	ENSORLG00000004452 ##30	ENSORLG00000004405 ##30	GZMM (ENSORLG00000030373)	hsd11b1la (ENSORLG00000004520) #33	ENSORLG00000028171 #31	micos13 (ENSORLG00000027818) #32	hsd11b1la (ENSORLG00000004562) #33	rgmd (ENSORLG00000004588) #34
Oryzias_b	ANCESTRAL SPECIES	15	ENSGT00940000156600.f	ENSGT00940000157634.c	ENSGT01030000234559.a.b	ENSGT01030000234558.C.p	ENSGT00940000164993.h	ENSGT00940000159391	ENSGT00530000063604.B	ENSGT00940000156349.c	ENSGT00940000155030	ENSGT00950000182827.C.b	ENSGT00390000018059.b.a	ENSGT00940000166035	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721.c.a #26	ENSGT00910000144271.A.c.b.a.a.d ##30	ENSGT00910000144271.A.c.b.a.a.c.a.a ##30	ENSGT00940000162161.A	ENSGT00940000162487 #33	ENSGT00950000182925.C.a.b #31	ENSGT00390000002629 #32	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000154201.a.a.b.d #36	ENSGT00940000159261.d.a #37	ENSGT01030000234534.B.a.a.a.a.a.a	ENSGT00940000154662.c
Indian medaka	MODERN SPECIES	764														CBARP (ENSOMEG00000000212) #20	fstl3 (ENSOMEG00000008433) #21	RNF126 (ENSOMEG00000008404) #22	bsg (ENSOMEG00000008369) #23	HCN2 (ENSOMEG00000008323) #24	POLRMT (ENSOMEG00000008292) #25	fgf22 (ENSOMEG00000008253) #26	ENSOMEG00000008221 ##30
Javanese ricefish	MODERN SPECIES	18	colgalt2b (ENSOJAG00000007065)	ENSOJAG00000007245	ENSOJAG00000007255	EDEM3 (ENSOJAG00000007292)	npl (ENSOJAG00000007492)	sec22bb (ENSOJAG00000007512)	fgf22 (ENSOJAG00000007537) #26	ENSOJAG00000007564	ENSOJAG00000007575	slc35a3a (ENSOJAG00000009378)	FAM78B (ENSOJAG00000009394)	rex1bd (ENSOJAG00000009442)	atp5f1d (ENSOJAG00000009480) #19	CBARP (ENSOJAG00000009502) #20	fstl3 (ENSOJAG00000009516) #21	RNF126 (ENSOJAG00000009535) #22	bsg (ENSOJAG00000009556) #23	HCN2 (ENSOJAG00000009575) #24	POLRMT (ENSOJAG00000009984) #25	fgf22 (ENSOJAG00000010325) #26	ENSOJAG00000010341 ##30	ENSOJAG00000010357 ##30	ENSOJAG00000010363 ##30	ENSOJAG00000010374	hsd11b1la (ENSOJAG00000010390) #33	ENSOJAG00000010425 #31	micos13 (ENSOJAG00000010446) #32	rgmd (ENSOJAG00000010459) #34	celf5a (ENSOJAG00000010498) #36	ENSOJAG00000010658	creb3l3a (ENSOJAG00000010690) #37
Tiger tail seahorse	MODERN SPECIES	469	lpl (ENSHCOG00000001712)	safb (ENSHCOG00000001705)	ENSHCOG00000001697	malt2 (ENSHCOG00000001692)	tmem161a (ENSHCOG00000001679) #7	slc25a42 (ENSHCOG00000001672) #8	MAU2 (ENSHCOG00000001663) #9	gatad2ab (ENSHCOG00000001653) #10	yjefn3 (ENSHCOG00000001651) #11	CILP2 (ENSHCOG00000001645) #12	si:ch211-212d10.2 (ENSHCOG00000001635) #13	midn (ENSHCOG00000001630) #18	atp5f1d (ENSHCOG00000001621) #19	CBARP (ENSHCOG00000001618) #20	fstl3 (ENSHCOG00000001614) #21	RNF126 (ENSHCOG00000001605) #22	bsg (ENSHCOG00000001591) #23	HCN2 (ENSHCOG00000001580) #24	POLRMT (ENSHCOG00000001565) #25	fgf22 (ENSHCOG00000001540) #26	ENSHCOG00000001536	ENSHCOG00000001533 #31	micos13 (ENSHCOG00000001524) #32	hsd11b1la (ENSHCOG00000001515) #33	rgmd (ENSHCOG00000001504) #34	ENSHCOG00000001500 #35	ENSHCOG00000001497	celf5a (ENSHCOG00000000056) #36	creb3l3a (ENSHCOG00000001490) #37	rxfp3.2b (ENSHCOG00000001481)	ENSHCOG00000001471
Pinecone sodierfish	MODERN SPECIES	18	tmem161a (ENSMMDG00005015217) #7	slc25a42 (ENSMMDG00005002737) #8	MAU2 (ENSMMDG00005002754) #9	gatad2ab (ENSMMDG00005002792) #10	yjefn3 (ENSMMDG00005002817) #11	CILP2 (ENSMMDG00005002863) #12	si:ch211-212d10.2 (ENSMMDG00005003032) #13	ENSMMDG00005003038 #15	CIRBP (ENSMMDG00005003130)	ENSMMDG00005003140	midn (ENSMMDG00005003153) #18	atp5f1d (ENSMMDG00005003161) #19	CBARP (ENSMMDG00005003165) #20	STK11 (ENSMMDG00005003173)	fstl3 (ENSMMDG00005003180) #21	RNF126 (ENSMMDG00005003190) #22	bsg (ENSMMDG00005003197) #23	HCN2 (ENSMMDG00005003209) #24	POLRMT (ENSMMDG00005003251) #25	fgf22 (ENSMMDG00005003383) #26	ENSMMDG00005003392 #30	ENSMMDG00005003405	ENSMMDG00005003411 #30	ENSMMDG00005003460	ENSMMDG00005003633 #31	micos13 (ENSMMDG00005003641) #32	hsd11b1la (ENSMMDG00005003645) #33	rgmd (ENSMMDG00005003652) #34	celf5a (ENSMMDG00005003668) #36	creb3l3a (ENSMMDG00005003726) #37	rxfp3.2b (ENSMMDG00005003742)
Cod	MODERN SPECIES	3	tmem161a (ENSGMOG00000007468) #7	ENSGMOG00000034212 #8	MAU2 (ENSGMOG00000007445) #9	gatad2ab (ENSGMOG00000007431) #10	tssk6 (ENSGMOG00000020360)	yjefn3 (ENSGMOG00000007424) #11	CILP2 (ENSGMOG00000007417) #12	si:ch211-212d10.2 (ENSGMOG00000007411) #13	ENSGMOG00000007191 #15	CIRBP (ENSGMOG00000007179)	ENSGMOG00000027600	midn (ENSGMOG00000037204) #18	atp5f1d (ENSGMOG00000011884) #19	CBARP (ENSGMOG00000034558) #20	fstl3 (ENSGMOG00000033119) #21	ENSGMOG00000011861 #22	HCN2 (ENSGMOG00000011855) #24	ENSGMOG00000011829 #25	fgf22 (ENSGMOG00000022424) #26	ENSGMOG00000011820 #30	ENSGMOG00000024979 #30	ENSGMOG00000011807 #30	ENSGMOG00000022326 #30	ENSGMOG00000028384 #30	ENSGMOG00000011778 #31	ENSGMOG00000011769	hsd11b1la (ENSGMOG00000011762) #33	rgmd (ENSGMOG00000025233) #34	ENSGMOG00000033465 #36	ENSGMOG00000011747	ENSGMOG00000034420
Protacanthopterygii	ANCESTRAL SPECIES	13	ENSGT00940000158163.a #8	ENSGT00390000012198.b.b #9	ENSGT00390000004097.a.e #10	ENSGT00940000160464	ENSGT00390000007227.b #11	ENSGT00390000008152.B.a #12	ENSGT00390000018225.A #13	ENSGT01030000234551.i #15	ENSGT00940000153524.d.b	ENSGT00940000165622.j	ENSGT00940000153524.c	ENSGT00510000049027.c #18	ENSGT00390000017576 #19	ENSGT00390000009230.a #20	ENSGT00940000161332 #21	ENSGT00940000157113.c #22	ENSGT00940000159142 #23	ENSGT00940000156523.b.c #24	ENSGT00390000008060 #25	ENSGT00940000161721 #26	ENSGT00390000002629 #32	ENSGT00940000162487 #33	ENSGT00950000183112.b.a.a.a #34	ENSGT00940000177291 #35	ENSGT00940000154201.a.a.b.d #36	ENSGT00940000154716.hc	ENSGT01030000234534.B.a.a.a.a.a.a	ENSGT00940000159261.d.a #37	ENSGT00940000154662.d.l.a	ENSGT00940000159179.h	ENSGT00940000161213
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	248	ENSGT00940000158163.a.g #8	ENSGT00390000012198.b.b.e #9	ENSGT00390000004097.a.e.f #10	ENSGT00940000160464.b	ENSGT00390000007227.b.`b.b #11	ENSGT00390000008152.B.a.h #12	ENSGT00940000153524.d.a	ENSGT00940000153524.c.e.b	ENSGT00510000049027.c.f.b #18	ENSGT00390000017576.g.b #19	ENSGT00390000009230.a.e #20	ENSGT00940000158050.h.b.a	ENSGT00940000158050.h.b.b	ENSGT00940000181603	ENSGT00940000161332.j #21	ENSGT00940000157113.c.a #22	ENSGT00940000159142.v #23	ENSGT00940000156523.b.c.d #24
Salmoninae_a	ANCESTRAL SPECIES	1	ENSGT00940000158163.a.g #8	ENSGT00390000012198.b.b.e #9	ENSGT00390000004097.a.e.f #10	ENSGT00940000160464.b	ENSGT00390000007227.b.`b.b #11	ENSGT00390000008152.B.a.h #12	ENSGT01030000234551.i.i #15	ENSGT00940000153524.d.a	ENSGT00940000153524.c.e.b	ENSGT00510000049027.c.f.b #18	ENSGT00390000017576.g.b #19	ENSGT00390000009230.a.e #20	ENSGT00940000158050.h.b.a	ENSGT00940000181603.b	ENSGT00940000161332.j #21	ENSGT00940000157113.c.a #22	ENSGT00940000159142.v #23	ENSGT00940000156523.b.c.d #24	ENSGT00810000125439.B.c.b.c.b	ENSGT00390000013052.n	ENSGT01030000234621.E	ENSGT00530000063868.b.j.a.a	ENSGT00940000158792.l	ENSGT01000000220683	ENSGT00940000168978	ENSGT00940000158636.k.b	ENSGT00940000165046.a.e	ENSGT00390000009663.k	ENSGT00390000009899.a.d.m	ENSGT00940000156574.C.o.b	ENSGT00940000153377.B.b
Salmo	ANCESTRAL SPECIES	9	ENSGT00390000000672.a.a.d #7	ENSGT00940000158163.a.g #8	ENSGT00390000012198.b.b.e #9	ENSGT00390000004097.a.e.f #10	ENSGT00940000160464.b	ENSGT00390000007227.b.`b.b #11	ENSGT00390000008152.B.a.h #12	ENSGT01030000234551.i.i #15	ENSGT00940000153524.d.a	ENSGT00940000153524.c.e.b	ENSGT00510000049027.c.f.b #18	ENSGT00390000017576.g.b #19	ENSGT00390000009230.a.e #20	ENSGT00940000158050.h.b.a	ENSGT00940000161332.j #21	ENSGT00940000157113.c.a #22	ENSGT00940000159142.v #23	ENSGT00940000156523.b.c.d #24	ENSGT00810000125439.B.c.b.c.b	ENSGT00390000013052.n	ENSGT01030000234621.E	ENSGT00530000063868.b.j.a.a	ENSGT00940000158792.l	ENSGT00940000158636.k.b	ENSGT00940000165046.a.e	ENSGT00390000009663.k	ENSGT00390000009899.a.d.m	ENSGT00940000156574.C.o.b	ENSGT00940000153377.B.b	ENSGT00530000063712.a.a.o.a.h	ENSGT00530000063712.a.a.o.b.e
River trout	MODERN SPECIES	8	tmem161a (ENSSTUG00000010960) #7	slc25a42 (ENSSTUG00000011031) #8	MAU2 (ENSSTUG00000011044) #9	gatad2ab (ENSSTUG00000011246) #10	tssk6 (ENSSTUG00000011358)	yjefn3 (ENSSTUG00000011367) #11	CILP2 (ENSSTUG00000011394) #12	ENSSTUG00000011404 #15	ENSSTUG00000011424	ENSSTUG00000011451	midn (ENSSTUG00000011464) #18	atp5f1d (ENSSTUG00000011488) #19	CBARP (ENSSTUG00000011506) #20	STK11 (ENSSTUG00000011517)	fstl3 (ENSSTUG00000011532) #21	RNF126 (ENSSTUG00000011546) #22	bsg (ENSSTUG00000011562) #23	ENSSTUG00000011607 #24	NELL2 (ENSSTUG00000011734)	TMEM117 (ENSSTUG00000012667)	ENSSTUG00000012720	twf1a (ENSSTUG00000002299)	IRAK4 (ENSSTUG00000002398)	ENSSTUG00000002563	ADAMTS20 (ENSSTUG00000002633)	zgc:110339 (ENSSTUG00000003255)	gal (ENSSTUG00000003271)	ppp6r3 (ENSSTUG00000003338)	lrp5 (ENSSTUG00000004468)	ENSSTUG00000004627	mespaa (ENSSTUG00000004640)
Atlantic salmon	MODERN SPECIES	7	ENSSSAG00000100915 #8	MAU2 (ENSSSAG00000064128) #9	gatad2ab (ENSSSAG00000117630) #10	tssk6 (ENSSSAG00000111745)	ENSSSAG00000005558	AIBP (ENSSSAG00000040025) #11	CILP2 (ENSSSAG00000039906) #12	ENSSSAG00000039849	ENSSSAG00000086926 #15	ENSSSAG00000116581	midn (ENSSSAG00000039778) #18	atp5f1d (ENSSSAG00000039718) #19	CBARP (ENSSSAG00000121542) #20	STK11 (ENSSSAG00000065291)	fstl3 (ENSSSAG00000097227) #21	ENSSSAG00000065197 #22	bsg (ENSSSAG00000094020) #23	ENSSSAG00000064939 #24	NELL2 (ENSSSAG00000063844)	TMEM117 (ENSSSAG00000062151)	ENSSSAG00000088184	twf1 (ENSSSAG00000063743)	irak4 (ENSSSAG00000063712)	ENSSSAG00000107042	ADAMTS20 (ENSSSAG00000063455)	zgc:110339 (ENSSSAG00000063431)	ppp6r3 (ENSSSAG00000059393)	lrp5 (ENSSSAG00000056819)	ENSSSAG00000056741	ENSSSAG00000056736	ENSSSAG00000056732
Oncorhynchus	ANCESTRAL SPECIES	2	ENSGT00940000158163.a.g #8	ENSGT00390000012198.b.b.e #9	ENSGT00390000004097.a.e.f #10	ENSGT00940000160464.b	ENSGT00390000007227.b.`b.b #11	ENSGT00390000008152.B.a.h #12	ENSGT01030000234551.i.i #15	ENSGT00940000153524.d.a	ENSGT00940000153524.c.e.b	ENSGT00510000049027.c.f.b #18	ENSGT00390000017576.g.b #19	ENSGT00390000009230.a.e #20	ENSGT00940000158050.h.b.a	ENSGT00940000181603.b	ENSGT00940000161332.j #21	ENSGT00940000157113.c.a #22	ENSGT00940000159142.v #23	ENSGT00940000156523.b.c.d #24	ENSGT00810000125439.B.c.b.c.b	ENSGT00390000013052.n	ENSGT01100000263537.b.a.b.f.a.a	ENSGT00530000063868.b.j.a.a	ENSGT01000000220683	ENSGT00940000168978	ENSGT00940000158636.k.b	ENSGT00940000165046.a.e	ENSGT00390000009663.k	ENSGT00390000009899.a.d.m	ENSGT00940000156574.C.o.b	ENSGT00940000153377.B.b	ENSGT00530000063712.a.a.o.a.h
Oncorhynchus_a	ANCESTRAL SPECIES	1	ENSGT00390000000672.a.a.d #7	ENSGT00940000158163.a.g #8	ENSGT00390000012198.b.b.e #9	ENSGT00390000004097.a.e.f #10	ENSGT00940000160464.b	ENSGT00390000007227.b.`b.b #11	ENSGT00390000008152.B.a.h #12	ENSGT01030000234551.i.i #15	ENSGT00940000153524.d.a.a	ENSGT00940000153524.c.e.b	ENSGT00510000049027.c.f.b #18	ENSGT00390000017576.g.b #19	ENSGT00390000009230.a.e #20	ENSGT00940000158050.h.b.a	ENSGT00940000161332.j #21	ENSGT00940000157113.c.a #22	ENSGT00940000159142.v #23	ENSGT00940000156523.b.c.d #24	ENSGT00810000125439.B.c.b.c.b	ENSGT00390000013052.n	ENSGT01100000263537.b.a.b.f.a.a	ENSGT00530000063868.b.j.a.a	ENSGT01000000220683	ENSGT00940000168978	ENSGT00940000158636.k.b	ENSGT00940000165046.a.e	ENSGT00390000009663.k	ENSGT00390000009899.a.d.m	ENSGT00940000156574.C.o.b	ENSGT00940000153377.B.b	ENSGT00530000063712.a.a.o.a.h
Chinook salmon	MODERN SPECIES	30	ENSOTSG00005033543	cers4a (ENSOTSG00005033549)	ENSOTSG00005033698	hnrnpm (ENSOTSG00005033702)	ENSOTSG00005033710	marchf2 (ENSOTSG00005033809)	rab11ba (ENSOTSG00005033811)	PIP5K1C (ENSOTSG00005033823)	gpx4b (ENSOTSG00005033856)	POLR2E (ENSOTSG00005033858)	tjp3 (ENSOTSG00005033899)	ENSOTSG00005033995	ENSOTSG00005034043	tm6sf2b (ENSOTSG00005034044)	hapln4 (ENSOTSG00005034045)	RNF126 (ENSOTSG00005034046) #22	bsg (ENSOTSG00005034047) #23	ENSOTSG00005034048 #24	NELL2 (ENSOTSG00005034120)	TMEM117 (ENSOTSG00005038492)	twf1a (ENSOTSG00005038493)	ENSOTSG00005038494	ENSOTSG00005038496	ADAMTS20 (ENSOTSG00005038509)	zgc:110339 (ENSOTSG00005038557)	gal (ENSOTSG00005038559)	ppp6r3 (ENSOTSG00005038577)	lrp5 (ENSOTSG00005039690)	ENSOTSG00005044203	mespaa (ENSOTSG00005044204)	ENSOTSG00005044205
Coho salmon	MODERN SPECIES	24	slc25a42 (ENSOKIG00005007107) #8	MAU2 (ENSOKIG00005007264) #9	gatad2ab (ENSOKIG00005007799) #10	tssk6 (ENSOKIG00005007940)	yjefn3 (ENSOKIG00005007960) #11	CILP2 (ENSOKIG00005008001) #12	ENSOKIG00005008021 #15	ENSOKIG00005008029	ENSOKIG00005008053	ENSOKIG00005008074	midn (ENSOKIG00005008083) #18	atp5f1d (ENSOKIG00005008101) #19	CBARP (ENSOKIG00005008129) #20	STK11 (ENSOKIG00005008141)	fstl3 (ENSOKIG00005008165) #21	RNF126 (ENSOKIG00005025787) #22	bsg (ENSOKIG00005025813) #23	ENSOKIG00005025830 #24	ENSOKIG00005025901	NELL2 (ENSOKIG00005026000)	ENSOKIG00005028192	TMEM117 (ENSOKIG00005028197)	ENSOKIG00005028235	twf1a (ENSOKIG00005028249)	ENSOKIG00005028327	ENSOKIG00005028343	ADAMTS20 (ENSOKIG00005028392)	zgc:110339 (ENSOKIG00005028813)	gal (ENSOKIG00005028823)	ppp6r3 (ENSOKIG00005028858)	lrp5 (ENSOKIG00005029138)
Rainbow trout	MODERN SPECIES		yjefn3 (ENSOMYG00000019527) #11	CILP2 (ENSOMYG00000019546) #12	ENSOMYG00000019574	cirbp (ENSOMYG00000066196)	ENSOMYG00000019584	ENSOMYG00000077875	midn (ENSOMYG00000019603) #18	ENSOMYG00000062455	ENSOMYG00000076162	atp5f1d (ENSOMYG00000019629) #19	CBARP (ENSOMYG00000019643) #20	STK11 (ENSOMYG00000019649)	ENSOMYG00000019661	fstl3 (ENSOMYG00000019666) #21	ENSOMYG00000069752	ENSOMYG00000019669 #22	bsg (ENSOMYG00000019675) #23	ENSOMYG00000019741 #24	NELL2 (ENSOMYG00000020216)	ENSOMYG00000017060	ENSOMYG00000070427	ENSOMYG00000017145	twf1a (ENSOMYG00000017167)	ENSOMYG00000072210	ENSOMYG00000017356	ENSOMYG00000017613	ENSOMYG00000069570	zgc:110339 (ENSOMYG00000019835)	gal (ENSOMYG00000019845)	ppp6r3 (ENSOMYG00000072211)	lrp5 (ENSOMYG00000020005)
Huchen	MODERN SPECIES	726							ENSHHUG00000009028 #15	ENSHHUG00000009039	ENSHHUG00000009061	midn (ENSHHUG00000009117) #18	atp5f1d (ENSHHUG00000009125) #19	CBARP (ENSHHUG00000009166) #20	ENSHHUG00000009199	ENSHHUG00000009241	fstl3 (ENSHHUG00000009253) #21	RNF126 (ENSHHUG00000009281) #22	bsg (ENSHHUG00000009297) #23	ENSHHUG00000009319 #24
Salmoninae	ANCESTRAL SPECIES	11	ENSGT00390000012198.b.b.f #9	ENSGT00390000004097.a.e.e #10	ENSGT00940000160464.a	ENSGT00390000007227.b.`b.a #11	ENSGT00390000008152.B.a.g #12	ENSGT00390000018225.A.v #13	ENSGT01030000234551.i #15	ENSGT00940000153524.d.b	ENSGT00940000165622.j	ENSGT00940000153524.c.e.a	ENSGT00510000049027.c.f.a #18	ENSGT00390000017576.g.a #19	ENSGT00390000009230.a.f #20	ENSGT00940000158050.g	ENSGT00940000161332.i #21	ENSGT00940000157113.c.b #22	ENSGT00940000159142.u #23	ENSGT00940000156523.b.c.c #24	ENSGT00390000008060.c #25	ENSGT00940000161721.e #26	ENSGT00910000144271.B.c ##30	ENSGT00940000162161.A.x	ENSGT00950000182925.C.a.b.e #31	ENSGT00390000002629.u #32	ENSGT00940000162487.t.a #33	ENSGT00950000183112.b.a.a.a.d #34	ENSGT00940000154201.a.a.b.d.cb.b.a #36	ENSGT01030000234534.B.a.a.a.a.a.a.b	ENSGT00940000159261.d.a.d #37	ENSGT00940000154662.d.l.a.a	ENSGT00940000159179.h
Huchen	MODERN SPECIES	1502														STK11 (ENSHHUG00000038713)	fstl3 (ENSHHUG00000038718) #21	RNF126 (ENSHHUG00000038722) #22	bsg (ENSHHUG00000038725) #23	HCN2 (ENSHHUG00000038756) #24	POLRMT (ENSHHUG00000038764) #25	fgf22 (ENSHHUG00000038791) #26
Salmoninae_a	ANCESTRAL SPECIES	22	ENSGT00390000012198.b.b.f #9	ENSGT00390000004097.a.e.e #10	ENSGT00940000160464.a	ENSGT00390000007227.b.`b.a #11	ENSGT00390000008152.B.a.g #12	ENSGT00390000018225.A.v #13	ENSGT01030000234551.i.j #15	ENSGT00940000153524.d.b	ENSGT00940000153524.c.e.a	ENSGT00510000049027.c.f.a #18	ENSGT00390000017576.g.a #19	ENSGT00390000009230.a.f #20	ENSGT00940000158050.h.b.b	ENSGT00940000181603.a	ENSGT00940000161332.i #21	ENSGT00940000157113.c.b #22	ENSGT00940000159142.u #23	ENSGT00940000156523.b.c.c #24	ENSGT00390000008060.c #25	ENSGT00940000161721.e #26	ENSGT00910000144271.B.c ##30	ENSGT00940000162161.A.x	ENSGT00950000182925.C.a.b.e #31	ENSGT00390000002629.u #32	ENSGT00940000162487.t.a #33	ENSGT00950000183112.b.a.a.a.d #34	ENSGT00940000154201.a.a.b.d.cb.b.a #36	ENSGT01030000234534.B.a.a.a.a.a.a.b	ENSGT00940000159261.d.a.d #37	ENSGT00940000154662.d.l.a.a	ENSGT00940000159179.h
Oncorhynchus	ANCESTRAL SPECIES	8	ENSGT00390000012198.b.b.f #9	ENSGT00390000004097.a.e.e #10	ENSGT00940000160464.a	ENSGT00390000007227.b.`b.a #11	ENSGT00390000008152.B.a.g #12	ENSGT00390000018225.A.v #13	ENSGT01030000234551.i.j #15	ENSGT00940000153524.d.b	ENSGT00940000153524.c.e.a	ENSGT00510000049027.c.f.a #18	ENSGT00390000017576.g.a #19	ENSGT00390000009230.a.f #20	ENSGT00940000158050.h.b.b	ENSGT00940000181603.a	ENSGT00940000161332.i #21	ENSGT00940000157113.c.b #22	ENSGT00940000159142.u #23	ENSGT00940000156523.b.c.c #24	ENSGT00390000008060.c #25	ENSGT00940000161721.e #26	ENSGT00910000144271.B.c ##30	ENSGT00940000162161.A.x	ENSGT00950000182925.C.a.b.e #31	ENSGT00390000002629.u #32	ENSGT00940000162487.t.a #33	ENSGT00950000183112.b.a.a.a.d #34	ENSGT00940000154201.a.a.b.d.cb.b.a #36	ENSGT01030000234534.B.a.a.a.a.a.a.b	ENSGT00940000159261.d.a.d #37	ENSGT00940000154662.d.l.a.a	ENSGT00940000159179.h
Rainbow trout	MODERN SPECIES	26	MAU2 (ENSOMYG00000015844) #9	gatad2ab (ENSOMYG00000016004) #10	tssk6 (ENSOMYG00000016174)	yjefn3 (ENSOMYG00000070926) #11	CILP2 (ENSOMYG00000016177) #12	ENSOMYG00000072025	ENSOMYG00000016193 #15	ENSOMYG00000016201	ENSOMYG00000016215	midn (ENSOMYG00000016235) #18	atp5f1d (ENSOMYG00000016264) #19	CBARP (ENSOMYG00000016300) #20	STK11 (ENSOMYG00000016307)	ENSOMYG00000048379	fstl3 (ENSOMYG00000016337) #21	ENSOMYG00000016394 #22	bsg (ENSOMYG00000016440) #23	HCN2 (ENSOMYG00000016466) #24	POLRMT (ENSOMYG00000016530) #25	fgf22 (ENSOMYG00000016720) #26	ENSOMYG00000016732 ##30	ENSOMYG00000016764	ENSOMYG00000025237 #31	micos13 (ENSOMYG00000016808) #32	hsd11b1la (ENSOMYG00000016844) #33	rgmd (ENSOMYG00000016869) #34	ENSOMYG00000014600	celf5a (ENSOMYG00000016886) #36	rxfp3.2b (ENSOMYG00000016896)	creb3l3a (ENSOMYG00000016901) #37	ENSOMYG00000067523
Oncorhynchus_a	ANCESTRAL SPECIES	14	ENSGT01100000263722	ENSGT00390000004097.a.e.e #10	ENSGT00940000160464.a	ENSGT00390000007227.b.`b.a #11	ENSGT00390000008152.B.a.g #12	ENSGT00390000018225.A.v #13	ENSGT01030000234551.i.j #15	ENSGT00940000153524.d.b	ENSGT00940000153524.c.e.a	ENSGT00510000049027.c.f.a #18	ENSGT00390000017576.g.a #19	ENSGT00390000009230.a.f #20	ENSGT00940000158050.h.b.b	ENSGT00940000181603.a	ENSGT00940000161332.i #21	ENSGT00940000157113.c.b #22	ENSGT00940000159142.u #23	ENSGT00940000156523.b.c.c #24	ENSGT00390000008060.c #25	ENSGT00940000161721.e #26	ENSGT00910000144271.B.c ##30	ENSGT00940000162161.A.x	ENSGT00950000182925.C.a.b.e #31	ENSGT00390000002629.u #32	ENSGT00940000162487.t.a #33	ENSGT00950000183112.b.a.a.a.d #34	ENSGT00940000154201.a.a.b.d.cb.b.a #36	ENSGT01030000234534.B.a.a.a.a.a.a.b	ENSGT00940000159261.d.a.d #37	ENSGT00940000154662.d.l.a.a	ENSGT00940000159179.h
Chinook salmon	MODERN SPECIES	29	ENSOTSG00005037789	gatad2ab (ENSOTSG00005037793) #10	tssk6 (ENSOTSG00005037794)	yjefn3 (ENSOTSG00005037795) #11	CILP2 (ENSOTSG00005037796) #12	si:ch211-212d10.2 (ENSOTSG00005037797) #13	GZMH (ENSOTSG00005037798) #15	ENSOTSG00005037800	ENSOTSG00005037801	midn (ENSOTSG00005037802) #18	atp5f1d (ENSOTSG00005037803) #19	CBARP (ENSOTSG00005037805) #20	STK11 (ENSOTSG00005037806)	ENSOTSG00005027748	fstl3 (ENSOTSG00005027811) #21	RNF126 (ENSOTSG00005027812) #22	bsg (ENSOTSG00005027813) #23	HCN2 (ENSOTSG00005027814) #24	POLRMT (ENSOTSG00005027819) #25	fgf22 (ENSOTSG00005027824) #26	ENSOTSG00005027827 ##30	ENSOTSG00005027829	ENSOTSG00005027830 #31	micos13 (ENSOTSG00005027831) #32	hsd11b1la (ENSOTSG00005027832) #33	rgmd (ENSOTSG00005027833) #34	celf5a (ENSOTSG00005027834) #36	ENSOTSG00005027836	rxfp3.2b (ENSOTSG00005027837)	creb3l3a (ENSOTSG00005027839) #37	eef2b (ENSOTSG00005027841)
Coho salmon	MODERN SPECIES	4	gatad2ab (ENSOKIG00005004194) #10	tssk6 (ENSOKIG00005004178)	yjefn3 (ENSOKIG00005004154) #11	CILP2 (ENSOKIG00005004138) #12	si:ch211-212d10.2 (ENSOKIG00005004132) #13	ENSOKIG00005004119 #15	ENSOKIG00005004109	ENSOKIG00005004096	ENSOKIG00005004090	midn (ENSOKIG00005004082) #18	atp5f1d (ENSOKIG00005004066) #19	CBARP (ENSOKIG00005004044) #20	STK11 (ENSOKIG00005004032)	ENSOKIG00005004027	fstl3 (ENSOKIG00005004000) #21	RNF126 (ENSOKIG00005003978) #22	bsg (ENSOKIG00005003966) #23	HCN2 (ENSOKIG00005003951) #24	POLRMT (ENSOKIG00005003927) #25	fgf22 (ENSOKIG00005003914) #26	ENSOKIG00005003907 ##30	ENSOKIG00005003897	ENSOKIG00005003891 #31	micos13 (ENSOKIG00005003878) #32	hsd11b1la (ENSOKIG00005003875) #33	rgmd (ENSOKIG00005003870) #34	ENSOKIG00005003868	celf5a (ENSOKIG00005003859) #36	rxfp3.2b (ENSOKIG00005003851)	creb3l3a (ENSOKIG00005045180) #37	btbd2a (ENSOKIG00005045078)
Salmo	ANCESTRAL SPECIES	14	ENSGT00390000012198.b.b.f #9	ENSGT00390000004097.a.e.e #10	ENSGT00940000160464.a	ENSGT00390000007227.b.`b.a #11	ENSGT00390000008152.B.a.g #12	ENSGT00390000018225.A.v #13	ENSGT01030000234551.i.j #15	ENSGT00940000153524.d.b	ENSGT00940000153524.c.e.a	ENSGT00510000049027.c.f.a #18	ENSGT00390000017576.g.a #19	ENSGT00390000009230.a.f #20	ENSGT00940000158050.h.b.b	ENSGT00940000181603.a	ENSGT00940000161332.i #21	ENSGT00940000157113.c.b #22	ENSGT00940000159142.u #23	ENSGT00940000156523.b.c.c #24	ENSGT00390000008060.c #25	ENSGT00940000161721.e #26	ENSGT00910000144271.B.c ##30	ENSGT00940000162161.A.x	ENSGT00950000182925.C.a.b.e #31	ENSGT00390000002629.u #32	ENSGT00940000162487.t.a #33	ENSGT00950000183112.b.a.a.a.d #34	ENSGT00940000154201.a.a.b.d.cb.b.a #36	ENSGT00990000213636	ENSGT01030000234534.B.a.a.a.a.a.a.b	ENSGT00940000159261.d.a.d #37	ENSGT00940000154662.d.l.a.a
Atlantic salmon	MODERN SPECIES	1	ENSSSAG00000087517 #8	MAU2 (ENSSSAG00000040517) #9	gatad2ab (ENSSSAG00000064195) #10	tssk6 (ENSSSAG00000090280)	yjefn3 (ENSSSAG00000089221) #11	cilp2 (ENSSSAG00000064229) #12	si:ch211-212d10.2 (ENSSSAG00000099818) #13	ENSSSAG00000102087 #15	ENSSSAG00000083658	ENSSSAG00000064249	midn (ENSSSAG00000064259) #18	ATPD (ENSSSAG00000064265) #19	CBARP (ENSSSAG00000064270) #20	STK11 (ENSSSAG00000064279)	fstl3 (ENSSSAG00000064290) #21	ENSSSAG00000064334 #22	bsg (ENSSSAG00000064339) #23	POLRMT (ENSSSAG00000064382) #25	HCN2 (ENSSSAG00000064351) #24	fgf22 (ENSSSAG00000064467) #26	ENSSSAG00000064475 ##30	ENSSSAG00000064480	ENSSSAG00000082290 #31	QIL1 (ENSSSAG00000064506) #32	hsd11b1la (ENSSSAG00000121503) #33	rgmd (ENSSSAG00000064525) #34	celf5a (ENSSSAG00000002383) #36	ENSSSAG00000002655	rxfp3.2b (ENSSSAG00000019275)	creb3l3a (ENSSSAG00000002670) #37	ENSSSAG00000002699
River trout	MODERN SPECIES	14	MAU2 (ENSSTUG00000044230) #9	gatad2ab (ENSSTUG00000044765) #10	tssk6 (ENSSTUG00000044800)	yjefn3 (ENSSTUG00000044808) #11	CILP2 (ENSSTUG00000044816) #12	si:ch211-212d10.2 (ENSSTUG00000044819) #13	ENSSTUG00000044825 #15	ENSSTUG00000044843	ENSSTUG00000044877	midn (ENSSTUG00000044915) #18	atp5f1d (ENSSTUG00000044942) #19	CBARP (ENSSTUG00000044986) #20	STK11 (ENSSTUG00000045067)	ENSSTUG00000045095	fstl3 (ENSSTUG00000045105) #21	RNF126 (ENSSTUG00000045178) #22	bsg (ENSSTUG00000045202) #23	HCN2 (ENSSTUG00000045212) #24	POLRMT (ENSSTUG00000045259) #25	fgf22 (ENSSTUG00000045289) #26	ENSSTUG00000045292	ENSSTUG00000045299 ##30	ENSSTUG00000045318	ENSSTUG00000045323 #31	micos13 (ENSSTUG00000045331) #32	hsd11b1la (ENSSTUG00000045349) #33	rgmd (ENSSTUG00000045354) #34	celf5a (ENSSTUG00000045372) #36	ENSSTUG00000045486	rxfp3.2b (ENSSTUG00000045500)	creb3l3a (ENSSTUG00000045505) #37
Northern pike	MODERN SPECIES	7	slc25a42 (ENSELUG00000020027) #8	MAU2 (ENSELUG00000019996) #9	gatad2ab (ENSELUG00000019905) #10	tssk6 (ENSELUG00000019867)	yjefn3 (ENSELUG00000019850) #11	CILP2 (ENSELUG00000019805) #12	ENSELUG00000000867	ENSELUG00000019758 #15	CIRBP (ENSELUG00000019617)	ENSELUG00000019588	midn (ENSELUG00000019565) #18	atp5f1d (ENSELUG00000000858) #19	CBARP (ENSELUG00000019511) #20	STK11 (ENSELUG00000000855)	fstl3 (ENSELUG00000019463) #21	RNF126 (ENSELUG00000000836) #22	bsg (ENSELUG00000019404) #23	HCN2 (ENSELUG00000019363) #24	POLRMT (ENSELUG00000019319) #25	fgf22 (ENSELUG00000019303) #26	ENSELUG00000019295	CFAD (ENSELUG00000019255) #15	ENSELUG00000032063 ##30	SPIN1 (ENSELUG00000028391) #31	micos13 (ENSELUG00000025803) #32	hsd11b1la (ENSELUG00000019096) #33	rgmd (ENSELUG00000019027) #34	celf5a (ENSELUG00000018986) #36	rxfp3.2b (ENSELUG00000018897)	creb3l3a (ENSELUG00000018885) #37	eef2b (ENSELUG00000018859)