Hystricomorpha	ANCESTRAL SPECIES	12	ENSGT00940000156907	ENSGT00390000005651	ENSGT00940000159257	ENSGT00730000111180	ENSGT00940000154634.c	ENSGT00940000162398 #11	ENSGT00940000160340.c #12	ENSGT00940000161845 #13	ENSGT00940000160445 #14	ENSGT00940000154530 #15	ENSGT00390000002061 #17	ENSGT00940000156172.b #18	ENSGT00940000157988 #19	ENSGT00940000155294 #20	ENSGT00390000001057 #21	ENSGT00940000157068 #22	ENSGT01030000234597.a.b.b.e.a.a #23	ENSGT00390000004451 #24	ENSGT00940000159419 #25	ENSGT00530000064276 #26	ENSGT00390000001846 #27	ENSGT00940000159542 #28	ENSGT00940000158224 #29	ENSGT00940000156473 #30	ENSGT00940000158635 #31	ENSGT00940000159124 #32	ENSGT00940000156130.b #33	ENSGT00390000000742 #34	ENSGT00390000018710 #35	ENSGT00390000011717 #36	ENSGT00940000156908 #37
Hystricomorpha_a	ANCESTRAL SPECIES	9	ENSGT00940000156907	ENSGT00390000005651	ENSGT00940000159257	ENSGT00730000111180	ENSGT00940000154634.c	ENSGT00940000162398 #11	ENSGT00940000160340.c #12	ENSGT00940000161845 #13	ENSGT00940000160445 #14	ENSGT00940000154530 #15	ENSGT00390000002061 #17	ENSGT00940000156172.b #18	ENSGT00940000157988 #19	ENSGT00940000155294 #20	ENSGT00390000001057 #21	ENSGT00940000157068 #22	ENSGT01030000234597.a.b.b.e.a.a #23	ENSGT00390000004451 #24	ENSGT00940000159419 #25	ENSGT00530000064276 #26	ENSGT00390000001846 #27	ENSGT00940000159542 #28	ENSGT00940000158224 #29	ENSGT00940000156473 #30	ENSGT00940000158635 #31	ENSGT00940000159124 #32	ENSGT00940000156130.b #33	ENSGT00390000000742 #34	ENSGT00390000018710 #35	ENSGT00390000011717 #36	ENSGT00940000156908 #37
Hystricomorpha_b	ANCESTRAL SPECIES	25	ENSGT00940000156907	ENSGT00390000005651	ENSGT00940000159257	ENSGT00730000111180	ENSGT00940000154634.c	ENSGT00940000162398 #11	ENSGT00940000160340.c #12	ENSGT00940000161845 #13	ENSGT00940000160445 #14	ENSGT00940000154530 #15	ENSGT00390000002061 #17	ENSGT00940000156172.b #18	ENSGT00940000157988 #19	ENSGT00940000155294 #20	ENSGT00390000001057 #21	ENSGT00940000157068 #22	ENSGT01030000234597.a.b.b.e.a.a #23	ENSGT00390000004451 #24	ENSGT00940000159419 #25	ENSGT00530000064276 #26	ENSGT00390000001846 #27	ENSGT00940000159542 #28	ENSGT00940000158224 #29	ENSGT00940000156473 #30	ENSGT00940000158635 #31	ENSGT00940000159124 #32	ENSGT00940000156130.b #33	ENSGT00390000000742 #34	ENSGT00390000018710 #35	ENSGT00390000011717 #36	ENSGT00940000156908 #37
Long-tailed chinchilla	MODERN SPECIES	151					FABP12 (ENSCLAG00000004588) #11	FABP4 (ENSCLAG00000004616) #12	FABP9 (ENSCLAG00000002147) #13	PMP2 (ENSCLAG00000002564) #14	FABP5 (ENSCLAG00000002584) #15	ENSCLAG00000002606 #16	PAG1 (ENSCLAG00000002660) #17	ZNF704 (ENSCLAG00000002748) #18	ZBTB10 (ENSCLAG00000002787) #19	TPD52 (ENSCLAG00000003004) #20	ENSCLAG00000003227 #21	HEY1 (ENSCLAG00000003265) #22	ENSCLAG00000003309 #23	ENSCLAG00000003448 #24	ZC2HC1A (ENSCLAG00000009816) #25	PKIA (ENSCLAG00000010536) #26	PEX2 (ENSCLAG00000010766) #27	ZFHX4 (ENSCLAG00000011659) #28	HNF4G (ENSCLAG00000013756) #29	CRISPLD1 (ENSCLAG00000002069) #30	PI15 (ENSCLAG00000002216) #31	GDAP1 (ENSCLAG00000002271) #32	JPH1 (ENSCLAG00000002323) #33	LY96 (ENSCLAG00000002393) #34	ENSCLAG00000002465 #35	ENSCLAG00000002529 #36	UBE2W (ENSCLAG00000002672) #37
Degu	MODERN SPECIES	155	ENSODEG00000004702	ENSODEG00000019059	ING2 (ENSODEG00000004668)	ENSODEG00000004569	ENSODEG00000005481	ENSODEG00000005460	DCTD (ENSODEG00000005367)	ENSODEG00000005312	ENSODEG00000005299	ENSODEG00000005279	PAG1 (ENSODEG00000005249) #17	ZNF704 (ENSODEG00000005088) #18	ZBTB10 (ENSODEG00000005049) #19	TPD52 (ENSODEG00000005732) #20	MRPS28 (ENSODEG00000005701) #21	HEY1 (ENSODEG00000005561) #22	ENSODEG00000005540 #23	ENSODEG00000005520	ENSODEG00000005504	ENSODEG00000005397	IL7 (ENSODEG00000005375) #24	ZC2HC1A (ENSODEG00000005317) #25	ENSODEG00000019147	PKIA (ENSODEG00000005280) #26
Guinea pig	MODERN SPECIES		ENSCPOG00000021018	RALYL (ENSCPOG00000012314)	SNX16 (ENSCPOG00000013718)	CHMP4C (ENSCPOG00000032705)	ENSCPOG00000014075	IMPA1 (ENSCPOG00000020959)	FABP12 (ENSCPOG00000012162) #11	FABP4 (ENSCPOG00000038872) #12	PMP2 (ENSCPOG00000035011) #14	FABP5 (ENSCPOG00000039055) #15	PAG1 (ENSCPOG00000039715) #17	ZNF704 (ENSCPOG00000012507) #18	ZBTB10 (ENSCPOG00000013700) #19	TPD52 (ENSCPOG00000040600) #20	ENSCPOG00000031885 #21	HEY1 (ENSCPOG00000008527) #22	ENSCPOG00000010466 #23	IL7 (ENSCPOG00000031262) #24	ZC2HC1A (ENSCPOG00000021093) #25	PKIA (ENSCPOG00000036157) #26	PEX2 (ENSCPOG00000034224) #27	ZFHX4 (ENSCPOG00000012693) #28	HNF4G (ENSCPOG00000011625) #29	CRISPLD1 (ENSCPOG00000002867) #30	PI15 (ENSCPOG00000036651) #31	GDAP1 (ENSCPOG00000002277) #32	JPH1 (ENSCPOG00000002273) #33	LY96 (ENSCPOG00000033283) #34	TMEM70 (ENSCPOG00000031120) #35	ELOC (ENSCPOG00000032030) #36	UBE2W (ENSCPOG00000008803) #37
Naked mole-rat female	MODERN SPECIES	13	CHMP4C (ENSHGLG00000015356)	ZFAND1 (ENSHGLG00000045302)	SLC10A5 (ENSHGLG00000033014)	ENSHGLG00000038181	FABP12 (ENSHGLG00000015629) #11	FABP4 (ENSHGLG00000017810) #12	FABP9 (ENSHGLG00000045805) #13	PMP2 (ENSHGLG00000046825) #14	FABP5 (ENSHGLG00000042536) #15	PAG1 (ENSHGLG00000016111) #17	ZNF704 (ENSHGLG00000015584) #18	ZBTB10 (ENSHGLG00000015634) #19	ENSHGLG00000048073	TPD52 (ENSHGLG00000050935) #20	ENSHGLG00000009986 #21	HEY1 (ENSHGLG00000018351) #22	ENSHGLG00000035408	STMN2 (ENSHGLG00000018371) #23	ENSHGLG00000034869	IL7 (ENSHGLG00000035539) #24	ZC2HC1A (ENSHGLG00000006246) #25	PKIA (ENSHGLG00000041007) #26	ENSHGLG00000009819	ENSHGLG00000032661	PEX2 (ENSHGLG00000037973) #27	ENSHGLG00000005277	ENSHGLG00000007968 #28	ENSHGLG00000005959	ENSHGLG00000007710 #29	ENSHGLG00000034560	ENSHGLG00000033328