Euarchontoglires ANCESTRAL SPECIES 17 ENSGT00950000183147.B ENSGT00940000163410 ENSGT00940000154755.d ENSGT00940000154755.c.b ENSGT00940000154755.c.a ENSGT00940000161877 ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00940000162636.B ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00940000167996 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B Euarchontoglires_A ANCESTRAL SPECIES 16 ENSGT00440000039984.a ENSGT00940000160277 ENSGT00950000183147.B ENSGT00940000154755.c.b ENSGT00940000154755.c.a ENSGT00940000161877 ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00940000162636.B ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00940000167996 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B Glires ANCESTRAL SPECIES 17 ENSGT00940000160277 ENSGT00950000183147.B ENSGT00940000154755.c.b ENSGT00940000154755.c.a ENSGT00940000164098 ENSGT00940000161877 ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00940000162636.B ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00940000167996 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B Rodentia ANCESTRAL SPECIES 18 ENSGT00950000183147.B ENSGT00940000154755.c.b ENSGT00940000154755.c.a ENSGT00940000161877.c.a ENSGT00940000164098 ENSGT00940000161877.c.b ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00940000162636.B ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00940000167996 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B Rodentia_B ANCESTRAL SPECIES 13 ENSGT00940000160277 ENSGT00950000183147.B ENSGT00940000154755.c.b.a ENSGT00940000154755.c.a ENSGT00940000161877.c.a ENSGT00940000161877.c.b ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00940000162636.B ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00940000167996 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B Myomorpha ANCESTRAL SPECIES 9 ENSGT00940000160277 ENSGT00950000183147.B ENSGT00940000154755.c.b.a ENSGT00940000154755.c.a ENSGT00940000161877.c.a ENSGT00940000161877.c.b ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00940000162636.B ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B ENSGT01030000234532.A.a.a.b Muroidea ANCESTRAL SPECIES 7 ENSGT00940000160277 ENSGT00950000183147.B ENSGT00940000154755.c.b.a ENSGT00940000154755.c.a ENSGT00940000161877.c.a ENSGT00940000161877.c.b ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00940000162636.B ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B ENSGT01030000234532.A.a.a.b Upper Galilee mountains blind mole rat MODERN SPECIES 353 Cst11 (ENSNGAG00000023054) #17 Cstl1 (ENSNGAG00000023212) #18 Napb (ENSNGAG00000023681) #19 Gzf1 (ENSNGAG00000024012) #20 Nxt1 (ENSNGAG00000000803) #21 Cd93 (ENSNGAG00000013591) #22 Sstr4 (ENSNGAG00000012473) #23 Muroidea_A ANCESTRAL SPECIES 2 ENSGT00860000135980 ENSGT00940000154755.c.b.a ENSGT00940000154755.c.b.b.a ENSGT00940000154755.c.a ENSGT00940000161877.c.a ENSGT00940000161877.c.b ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00940000162636.B ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B ENSGT01030000234532.A.a.a.b Cricetidae ANCESTRAL SPECIES 5 ENSGT00860000135980 ENSGT00940000154755.c.b.a ENSGT00940000154755.c.b.b.a ENSGT00940000154755.c.a ENSGT00940000161877.c.a ENSGT00940000161877.c.b ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00940000162636.B ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B ENSGT01030000234532.A.a.a.b Cricetinae ANCESTRAL SPECIES 1 ENSGT00950000183147.B ENSGT00860000135980 ENSGT00940000154755.c.b.a ENSGT00940000154755.c.a ENSGT00940000161877.c.a ENSGT00940000161877.c.b ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00940000162636.B ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B ENSGT01030000234532.A.a.a.b Chinese hamster chok1gshd MODERN SPECIES 188 ENSCGRG00001019793 Cst10 (ENSCGRG00001015577) ENSCGRG00001017333 ENSCGRG00001020338 ENSCGRG00001014456 ENSCGRG00001017812 Cst13 (ENSCGRG00001024079) Cst8 (ENSCGRG00001020750) Cst12 (ENSCGRG00001024036) Cstdc1 (ENSCGRG00001024407) Cst11 (ENSCGRG00001004859) #17 Cstl1 (ENSCGRG00001006313) #18 Napb (ENSCGRG00001015884) #19 Gzf1 (ENSCGRG00001003944) #20 ENSCGRG00001007062 #21 Cd93 (ENSCGRG00001016628) #22 Thbd (ENSCGRG00001010215) Sstr4 (ENSCGRG00001010896) #23 Foxa2 (ENSCGRG00001000494) Pax1 (ENSCGRG00001009223) Nkx2-2 (ENSCGRG00001013924) ENSCGRG00001016394 Nkx2-4 (ENSCGRG00001002742) Xrn2 (ENSCGRG00001010676) Kiz (ENSCGRG00001020800) Ralgapa2 (ENSCGRG00001024249) Insm1 (ENSCGRG00001011430) Cfap61 (ENSCGRG00001022702) Slc24a3 (ENSCGRG00001004364) Scp2d1 (ENSCGRG00001008412) Dtd1 (ENSCGRG00001008221) Golden Hamster MODERN SPECIES 650 Acss1 (ENSMAUG00000016079) Apmap (ENSMAUG00000022255) Cst7 (ENSMAUG00000006797) 1810024B03Rik (ENSMAUG00000019265) Syndig1 (ENSMAUG00000012485) ENSMAUG00000013001 Cst10 (ENSMAUG00000020427) Cst3 (ENSMAUG00000012476) Cstdc2 (ENSMAUG00000014409) Cst9 (ENSMAUG00000012174) Cst13 (ENSMAUG00000021851) Cst12 (ENSMAUG00000010970) Napb (ENSMAUG00000018004) #19 Gzf1 (ENSMAUG00000019656) #20 Nxt1 (ENSMAUG00000004141) #21 Cd93 (ENSMAUG00000019441) #22 Sstr4 (ENSMAUG00000008430) #23 Foxa2 (ENSMAUG00000016457) Pax1 (ENSMAUG00000019674) Nkx2-2 (ENSMAUG00000004347) Nkx2-4 (ENSMAUG00000013928) Xrn2 (ENSMAUG00000021842) Kiz (ENSMAUG00000012933) Ralgapa2 (ENSMAUG00000000917) Insm1 (ENSMAUG00000008643) Cfap61 (ENSMAUG00000021388) ENSMAUG00000018263 ENSMAUG00000014865 Crnkl1 (ENSMAUG00000020764) Naa20 (ENSMAUG00000016403) Rin2 (ENSMAUG00000010319) Cricetidae_B ANCESTRAL SPECIES 4 ENSGT00950000183147.B ENSGT00860000135980 ENSGT00940000154755.c.b.a ENSGT00940000154755.c.b.b.a ENSGT00940000154755.c.a ENSGT00940000161877.c.a ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00940000162636.B ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B ENSGT01030000234532.A.a.a.b Northern American deer mouse MODERN SPECIES 17 Syndig1 (ENSPEMG00000002878) Cst10 (ENSPEMG00000018501) ENSPEMG00000025257 ENSPEMG00000028985 Cst3 (ENSPEMG00000019347) Cst9 (ENSPEMG00000020106) Cst13 (ENSPEMG00000005338) Cst8 (ENSPEMG00000030932) Cst12 (ENSPEMG00000000557) Cstdc1 (ENSPEMG00000018705) Cst11 (ENSPEMG00000000143) #17 Cstl1 (ENSPEMG00000015396) #18 Napb (ENSPEMG00000014658) #19 Gzf1 (ENSPEMG00000011285) #20 Nxt1 (ENSPEMG00000010397) #21 Cd93 (ENSPEMG00000009909) #22 Thbd (ENSPEMG00000013258) Sstr4 (ENSPEMG00000013404) #23 Foxa2 (ENSPEMG00000018383) ENSPEMG00000013352 Pax1 (ENSPEMG00000013032) Nkx2-2 (ENSPEMG00000031205) Xrn2 (ENSPEMG00000000111) Kiz (ENSPEMG00000019926) ENSPEMG00000018301 Ralgapa2 (ENSPEMG00000015207) Insm1 (ENSPEMG00000011704) Cfap61 (ENSPEMG00000019999) Crnkl1 (ENSPEMG00000000073) Naa20 (ENSPEMG00000019944) Rin2 (ENSPEMG00000007218) Prairie vole MODERN SPECIES 86 Cst3 (ENSMOCG00000018857) Cstdc2 (ENSMOCG00000021896) Cst13 (ENSMOCG00000012990) Cst8 (ENSMOCG00000020831) Cst12 (ENSMOCG00000013277) Cstdc1 (ENSMOCG00000015424) Cst11 (ENSMOCG00000016678) #17 Cstl1 (ENSMOCG00000019330) #18 Napb (ENSMOCG00000000502) #19 Gzf1 (ENSMOCG00000017816) #20 Nxt1 (ENSMOCG00000018712) #21 ENSMOCG00000014565 Cd93 (ENSMOCG00000008988) #22 Thbd (ENSMOCG00000004558) Sstr4 (ENSMOCG00000004743) #23 Foxa2 (ENSMOCG00000017025) Pax1 (ENSMOCG00000000474) Nkx2-2 (ENSMOCG00000016851) Nkx2-4 (ENSMOCG00000012451) Xrn2 (ENSMOCG00000012588) Kiz (ENSMOCG00000022509) ENSMOCG00000020632 Ralgapa2 (ENSMOCG00000015663) Insm1 (ENSMOCG00000010418) Cfap61 (ENSMOCG00000001829) ENSMOCG00000000681 ENSMOCG00000021892 Rin2 (ENSMOCG00000011014) Murinae ANCESTRAL SPECIES 1 ENSGT00950000183147.B ENSGT00860000135980 ENSGT00940000154755.c.b.a ENSGT00940000154755.c.a ENSGT00940000161877.c.a ENSGT00940000161877.c.b ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00940000162636.B ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B ENSGT01030000234532.A.a.a.b Mus ANCESTRAL SPECIES 1 ENSGT00950000183147.B ENSGT00860000135980 ENSGT00940000154755.c.b.a ENSGT00940000154755.c.a ENSGT00940000161877.c.a ENSGT00940000161877.c.b ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00940000162636.B ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B ENSGT01030000234532.A.a.a.b Mus_A ANCESTRAL SPECIES ENSGT00950000183147.B ENSGT00860000135980 ENSGT00940000154755.c.b.a ENSGT00940000154755.c.a ENSGT00940000161877.c.a ENSGT00940000161877.c.b ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00940000162636.B ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00970000195442 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00390000004987 ENSGT00550000074931.m ENSGT00550000075046 ENSGT00940000154866.B Mus_B ANCESTRAL SPECIES 1 ENSGT00860000135980 ENSGT00940000154755.c.b.a ENSGT00940000172008 ENSGT00940000154755.c.a ENSGT00940000161877.c.a ENSGT00940000161877.c.b ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00940000162636.B ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00970000195442 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00390000004987 ENSGT00550000074931.m ENSGT00550000075046 ENSGT00940000154866.B Mouse MODERN SPECIES 11 Syndig1 (ENSMUSG00000074736) Cst10 (ENSMUSG00000033156) Gm1330 (ENSMUSG00000063507) Cst3 (ENSMUSG00000027447) Cstdc2 (ENSMUSG00000027446) Cst9 (ENSMUSG00000027445) Cst13 (ENSMUSG00000036924) Cst8 (ENSMUSG00000027442) Cst12 (ENSMUSG00000027443) Cstdc1 (ENSMUSG00000027444) Cst11 (ENSMUSG00000036958) #17 Cstl1 (ENSMUSG00000055177) #18 Napb (ENSMUSG00000027438) #19 Gzf1 (ENSMUSG00000027439) #20 Nxt1 (ENSMUSG00000036992) #21 Cd93 (ENSMUSG00000027435) #22 Thbd (ENSMUSG00000074743) Sstr4 (ENSMUSG00000037014) #23 Foxa2 (ENSMUSG00000037025) Pax1 (ENSMUSG00000037034) Nkx2-2 (ENSMUSG00000027434) Nkx2-4 (ENSMUSG00000054160) Xrn2 (ENSMUSG00000027433) Kiz (ENSMUSG00000074749) Ralgapa2 (ENSMUSG00000037110) Insm1 (ENSMUSG00000068154) Cfap61 (ENSMUSG00000037143) Crnkl1 (ENSMUSG00000001767) Naa20 (ENSMUSG00000002728) Rin2 (ENSMUSG00000001768) Slc24a3 (ENSMUSG00000063873) Mus_C ANCESTRAL SPECIES ENSGT00860000135980 ENSGT00940000154755.c.b.a ENSGT00940000172008 ENSGT00940000154755.c.a ENSGT00940000161877.c.a ENSGT00940000161877.c.b ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00940000162636.B ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00970000195442 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00390000004987 ENSGT00550000074931.m ENSGT00550000075046 ENSGT00940000154866.B spretus MODERN SPECIES 11 Syndig1 (MGP_SPRETEiJ_G0025340) Cst10 (MGP_SPRETEiJ_G0025339) MGP_SPRETEiJ_G0025338 Cst3 (MGP_SPRETEiJ_G0025337) Cstdc2 (MGP_SPRETEiJ_G0025336) Cst9 (MGP_SPRETEiJ_G0025335) Cst13 (MGP_SPRETEiJ_G0025334) Cst8 (MGP_SPRETEiJ_G0025333) Cst12 (MGP_SPRETEiJ_G0025332) Cstdc1 (MGP_SPRETEiJ_G0025331) Cst11 (MGP_SPRETEiJ_G0025330) #17 Cstl1 (MGP_SPRETEiJ_G0025329) #18 Napb (MGP_SPRETEiJ_G0025328) #19 Gzf1 (MGP_SPRETEiJ_G0025327) #20 Nxt1 (MGP_SPRETEiJ_G0025326) #21 Cd93 (MGP_SPRETEiJ_G0025325) #22 Thbd (MGP_SPRETEiJ_G0025324) Sstr4 (MGP_SPRETEiJ_G0025323) #23 Foxa2 (MGP_SPRETEiJ_G0025322) Pax1 (MGP_SPRETEiJ_G0025321) Nkx2-2 (MGP_SPRETEiJ_G0025320) Nkx2-4 (MGP_SPRETEiJ_G0025319) Xrn2 (MGP_SPRETEiJ_G0025318) MGP_SPRETEiJ_G0025317 Kiz (MGP_SPRETEiJ_G0025316) Ralgapa2 (MGP_SPRETEiJ_G0025315) Insm1 (MGP_SPRETEiJ_G0025314) Cfap61 (MGP_SPRETEiJ_G0025313) Crnkl1 (MGP_SPRETEiJ_G0025312) Naa20 (MGP_SPRETEiJ_G0025311) Rin2 (MGP_SPRETEiJ_G0025310) Steppe mouse MODERN SPECIES 41 Cst3 (ENSMSIG00000003295) Cstdc2 (ENSMSIG00000003283) Cst9 (ENSMSIG00000003261) Cst13 (ENSMSIG00000003223) Cst8 (ENSMSIG00000003194) Cst12 (ENSMSIG00000003169) Cstdc1 (ENSMSIG00000003153) Cst11 (ENSMSIG00000003137) #17 Cstl1 (ENSMSIG00000003118) #18 Napb (ENSMSIG00000003094) #19 Gzf1 (ENSMSIG00000003080) #20 Nxt1 (ENSMSIG00000003067) #21 ENSMSIG00000003019 Cd93 (ENSMSIG00000002996) #22 Thbd (ENSMSIG00000002989) Sstr4 (ENSMSIG00000002973) #23 Foxa2 (ENSMSIG00000002945) Ryukyu mouse MODERN SPECIES 11 MGP_CAROLIEiJ_G0024422 Syndig1 (MGP_CAROLIEiJ_G0024421) Cst10 (MGP_CAROLIEiJ_G0024420) Cst3 (MGP_CAROLIEiJ_G0024419) Cstdc2 (MGP_CAROLIEiJ_G0024418) Cst9 (MGP_CAROLIEiJ_G0024417) Cst13 (MGP_CAROLIEiJ_G0024416) Cst8 (MGP_CAROLIEiJ_G0024415) Cst12 (MGP_CAROLIEiJ_G0024414) Cstdc1 (MGP_CAROLIEiJ_G0024413) Cst11 (MGP_CAROLIEiJ_G0024412) #17 Cstl1 (MGP_CAROLIEiJ_G0024411) #18 Napb (MGP_CAROLIEiJ_G0024410) #19 Gzf1 (MGP_CAROLIEiJ_G0024409) #20 Nxt1 (MGP_CAROLIEiJ_G0024408) #21 Cd93 (MGP_CAROLIEiJ_G0024407) #22 Thbd (MGP_CAROLIEiJ_G0024406) Sstr4 (MGP_CAROLIEiJ_G0024405) #23 Foxa2 (MGP_CAROLIEiJ_G0024404) Pax1 (MGP_CAROLIEiJ_G0024403) Nkx2-2 (MGP_CAROLIEiJ_G0024402) Nkx2-4 (MGP_CAROLIEiJ_G0024401) Xrn2 (MGP_CAROLIEiJ_G0024400) MGP_CAROLIEiJ_G0024399 Kiz (MGP_CAROLIEiJ_G0024398) Ralgapa2 (MGP_CAROLIEiJ_G0024397) Insm1 (MGP_CAROLIEiJ_G0024396) Cfap61 (MGP_CAROLIEiJ_G0024395) Crnkl1 (MGP_CAROLIEiJ_G0024394) Naa20 (MGP_CAROLIEiJ_G0024393) Rin2 (MGP_CAROLIEiJ_G0024392) Shrew mouse MODERN SPECIES 16 MGP_PahariEiJ_G0025865 MGP_PahariEiJ_G0025864 Syndig1 (MGP_PahariEiJ_G0025863) Cst10 (MGP_PahariEiJ_G0025862) Cst3 (MGP_PahariEiJ_G0025861) Cstdc2 (MGP_PahariEiJ_G0025860) Cst13 (MGP_PahariEiJ_G0025859) Cst8 (MGP_PahariEiJ_G0025858) Cst12 (MGP_PahariEiJ_G0025857) Cstdc1 (MGP_PahariEiJ_G0025856) Cst11 (MGP_PahariEiJ_G0025855) #17 Cstl1 (MGP_PahariEiJ_G0025854) #18 Napb (MGP_PahariEiJ_G0025853) #19 Gzf1 (MGP_PahariEiJ_G0025852) #20 Nxt1 (MGP_PahariEiJ_G0025851) #21 Cd93 (MGP_PahariEiJ_G0025850) #22 Thbd (MGP_PahariEiJ_G0025849) Sstr4 (MGP_PahariEiJ_G0025848) #23 Foxa2 (MGP_PahariEiJ_G0025847) Pax1 (MGP_PahariEiJ_G0025846) Nkx2-2 (MGP_PahariEiJ_G0025845) Nkx2-4 (MGP_PahariEiJ_G0025844) Xrn2 (MGP_PahariEiJ_G0025843) Kiz (MGP_PahariEiJ_G0025842) Ralgapa2 (MGP_PahariEiJ_G0025841) Insm1 (MGP_PahariEiJ_G0025840) Cfap61 (MGP_PahariEiJ_G0025839) Crnkl1 (MGP_PahariEiJ_G0025838) Naa20 (MGP_PahariEiJ_G0025837) Rin2 (MGP_PahariEiJ_G0025836) MGP_PahariEiJ_G0025835 Rat MODERN SPECIES 13 Fth1-ps5 (ENSRNOG00000033100) Andpro (ENSRNOG00000031840) AABR07054186.1 (ENSRNOG00000032769) Cst3 (ENSRNOG00000005195) Cstdc2 (ENSRNOG00000005178) Cst9l (ENSRNOG00000005162) Cst13 (ENSRNOG00000005103) Cst8 (ENSRNOG00000004989) Cst12 (ENSRNOG00000004946) LOC257643 (ENSRNOG00000004858) Cst11 (ENSRNOG00000004808) #17 Cstl1 (ENSRNOG00000004779) #18 Napb (ENSRNOG00000004753) #19 Gzf1 (ENSRNOG00000004735) #20 Nxt1 (ENSRNOG00000004700) #21 Cd93 (ENSRNOG00000024799) #22 Thbd (ENSRNOG00000004687) Sstr4 (ENSRNOG00000004641) #23 Foxa2 (ENSRNOG00000013133) Pax1 (ENSRNOG00000024882) Nkx2-2 (ENSRNOG00000012728) Nkx2-4 (ENSRNOG00000012647) Xrn2 (ENSRNOG00000011785) Kiz (ENSRNOG00000025141) ENSRNOG00000070752 Ralgapa2 (ENSRNOG00000036964) Insm1 (ENSRNOG00000068937) AABR07054096.1 (ENSRNOG00000011028) Crnkl1 (ENSRNOG00000010587) Naa20 (ENSRNOG00000010523) Rin2 (ENSRNOG00000010131) Lesser Egyptian jerboa MODERN SPECIES 159 Cst3 (ENSJJAG00000013565) Cst9 (ENSJJAG00000013510) Cst13 (ENSJJAG00000013369) Cst8 (ENSJJAG00000013212) Cst12 (ENSJJAG00000012500) Cstdc1 (ENSJJAG00000012315) Cstl1 (ENSJJAG00000011653) #18 Napb (ENSJJAG00000010872) #19 Gzf1 (ENSJJAG00000008172) #20 ENSJJAG00000012022 #21 Cd93 (ENSJJAG00000007591) #22 Sstr4 (ENSJJAG00000023336) #23 Foxa2 (ENSJJAG00000023228) Pax1 (ENSJJAG00000023177) Nkx2-2 (ENSJJAG00000022426) Nkx2-4 (ENSJJAG00000022335) Xrn2 (ENSJJAG00000022128) Kiz (ENSJJAG00000021546) ENSJJAG00000020834 ENSJJAG00000020710 ENSJJAG00000020467 Insm1 (ENSJJAG00000020276) Cfap61 (ENSJJAG00000018922) Crnkl1 (ENSJJAG00000016926) Naa20 (ENSJJAG00000016004) ENSJJAG00000015745 Kangaroo rat MODERN SPECIES 418 Pygb (ENSDORG00000007176) Entpd6 (ENSDORG00000007175) Vsx1 (ENSDORG00000005490) Acss1 (ENSDORG00000004006) Apmap (ENSDORG00000025391) Cst7 (ENSDORG00000005298) Syndig1 (ENSDORG00000003111) ENSDORG00000008948 Cst3 (ENSDORG00000027673) Cst13 (ENSDORG00000027228) Cst8 (ENSDORG00000011859) Cst12 (ENSDORG00000023744) Napb (ENSDORG00000011856) #19 Gzf1 (ENSDORG00000011855) #20 Nxt1 (ENSDORG00000024690) #21 Cd93 (ENSDORG00000028704) #22 Sstr4 (ENSDORG00000010486) #23 Foxa2 (ENSDORG00000027269) Pax1 (ENSDORG00000016051) Nkx2-2 (ENSDORG00000007972) Nkx2-4 (ENSDORG00000023542) Xrn2 (ENSDORG00000005434) ENSDORG00000024554 ENSDORG00000025962 Insm1 (ENSDORG00000009864) ENSDORG00000000395 ENSDORG00000029623 ENSDORG00000024717 ENSDORG00000000394 Naa20 (ENSDORG00000028339) Rin2 (ENSDORG00000000392) Rodentia_A ANCESTRAL SPECIES 17 ENSGT00940000154755.c.b ENSGT00940000154755.c.a ENSGT00940000161877.d ENSGT00940000164098 ENSGT00940000161877.c.b ENSGT00940000161877.c.a ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00940000162636.B ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00940000167996 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B Sciuridae ANCESTRAL SPECIES 13 ENSGT00940000154755.c.b.e ENSGT00940000154755.c.a ENSGT00940000164098 ENSGT00940000161877.c.b ENSGT00940000161877.d ENSGT00940000161877.c.a ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00940000162636.B ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00940000167996 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B Marmotini ANCESTRAL SPECIES 5 ENSGT00940000154755.c.b.f ENSGT00940000154755.c.b.e ENSGT00940000154755.c.a ENSGT00940000161877.c.b ENSGT00940000161877.d ENSGT00940000161877.c.a ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00940000162636.B ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00390000007696.e.a.a.a ENSGT00950000183139.A ENSGT00940000162552 ENSGT00940000167996 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 Marmotini_b ANCESTRAL SPECIES 140 ENSGT00940000154755.c.b.f ENSGT00940000154755.c.b.e ENSGT00940000154755.c.a ENSGT00940000161877.c.b ENSGT00940000161877.d ENSGT00940000161877.c.a ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00940000162636.B ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00390000007696.e.a.a.a Squirrel MODERN SPECIES 220 ENSSTOG00000023496 ENSSTOG00000026963 ENSSTOG00000015564 ENSSTOG00000028869 ENSSTOG00000004129 ENSSTOG00000020102 CST8 (ENSSTOG00000004122) ENSSTOG00000024532 ENSSTOG00000021841 CST11 (ENSSTOG00000004847) #17 CSTL1 (ENSSTOG00000024563) #18 NAPB (ENSSTOG00000022350) #19 ENSSTOG00000030626 GZF1 (ENSSTOG00000009820) #20 NXT1 (ENSSTOG00000026331) #21 CD93 (ENSSTOG00000024530) #22 SSTR4 (ENSSTOG00000021697) #23 FOXA2 (ENSSTOG00000020150) PAX1 (ENSSTOG00000003000) NKX2-2 (ENSSTOG00000021450) XRN2 (ENSSTOG00000000589) KIZ (ENSSTOG00000007449) Arctic ground squirrel MODERN SPECIES 114 ENSUPAG00010009918 ENSUPAG00010009902 ENSUPAG00010009895 CST8 (ENSUPAG00010009884) ENSUPAG00010009878 ENSUPAG00010009872 CST11 (ENSUPAG00010009858) #17 CSTL1 (ENSUPAG00010009856) #18 ENSUPAG00010009855 ENSUPAG00010009850 NAPB (ENSUPAG00010009788) #19 GZF1 (ENSUPAG00010009780) #20 NXT1 (ENSUPAG00010009776) #21 ENSUPAG00010009772 ENSUPAG00010009759 CD93 (ENSUPAG00010009758) #22 THBD (ENSUPAG00010009753) SSTR4 (ENSUPAG00010009751) #23 FOXA2 (ENSUPAG00010009738) ENSUPAG00010009726 PAX1 (ENSUPAG00010009718) NKX2-2 (ENSUPAG00010009710) NKX2-4 (ENSUPAG00010009706) XRN2 (ENSUPAG00010009667) KIZ (ENSUPAG00010009237) ENSUPAG00010009220 Alpin marmot MODERN SPECIES SYNDIG1 (ENSMMMG00000004598) ENSMMMG00000004547 ENSMMMG00000004528 ENSMMMG00000004523 ENSMMMG00000004513 CST8 (ENSMMMG00000004504) ENSMMMG00000004491 ENSMMMG00000004483 CST11 (ENSMMMG00000004467) #17 CSTL1 (ENSMMMG00000004456) #18 ENSMMMG00000004433 NAPB (ENSMMMG00000004419) #19 GZF1 (ENSMMMG00000004407) #20 NXT1 (ENSMMMG00000004405) #21 ENSMMMG00000004398 CD93 (ENSMMMG00000004395) #22 THBD (ENSMMMG00000004391) SSTR4 (ENSMMMG00000004385) #23 FOXA2 (ENSMMMG00000004350) PAX1 (ENSMMMG00000004326) NKX2-2 (ENSMMMG00000004284) XRN2 (ENSMMMG00000004161) KIZ (ENSMMMG00000003881) ENSMMMG00000003871 RALGAPA2 (ENSMMMG00000003453) ENSMMMG00000003417 ENSMMMG00000003408 ENSMMMG00000003290 CRNKL1 (ENSMMMG00000003244) NAA20 (ENSMMMG00000003240) RIN2 (ENSMMMG00000003172) Eurasian red squirrel MODERN SPECIES 11 ENSSVLG00005012618 ENSSVLG00005012635 ENSSVLG00005012678 ENSSVLG00005012749 ENSSVLG00005012823 ENSSVLG00005012871 CST8 (ENSSVLG00005000126) ENSSVLG00005000133 ENSSVLG00005000139 CST11 (ENSSVLG00005000162) #17 CSTL1 (ENSSVLG00005000168) #18 NAPB (ENSSVLG00005000227) #19 GZF1 (ENSSVLG00005000288) #20 ENSSVLG00005000304 #21 ENSSVLG00005000317 #21 CD93 (ENSSVLG00005000330) #22 THBD (ENSSVLG00005000349) SSTR4 (ENSSVLG00005000359) #23 ENSSVLG00005000368 FOXA2 (ENSSVLG00005000389) ENSSVLG00005000403 PAX1 (ENSSVLG00005000421) NKX2-2 (ENSSVLG00005000441) NKX2-4 (ENSSVLG00005000455) XRN2 (ENSSVLG00005000470) KIZ (ENSSVLG00005000513) ENSSVLG00005000546 RALGAPA2 (ENSSVLG00005000611) INSM1 (ENSSVLG00005000689) CFAP61 (ENSSVLG00005000731) ENSSVLG00005000777 Hystricomorpha ANCESTRAL SPECIES 10 ENSGT00940000158550 ENSGT00440000039984.a ENSGT00940000160277 ENSGT00950000183147.B ENSGT00940000154755.c.b ENSGT00940000154755.c.a ENSGT00940000161877.d ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00940000167996 ENSGT00390000004987.n.a ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B ENSGT01030000234532.A.a.a.b Hystricomorpha_a ANCESTRAL SPECIES 8 ENSGT00440000039984.a ENSGT00940000160277 ENSGT00950000183147.B ENSGT00940000154755.c.b.c ENSGT00940000154755.c.b.d ENSGT00940000154755.c.a ENSGT00940000161877.d ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00940000167996 ENSGT00390000004987.n.a ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B ENSGT01030000234532.A.a.a.b Hystricomorpha_b ANCESTRAL SPECIES 31 ENSGT00940000158550 ENSGT00440000039984.a ENSGT00940000160277 ENSGT00950000183147.B ENSGT00940000154755.c.b.c ENSGT00940000154755.c.b.d ENSGT00940000154755.c.a ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00940000167996 ENSGT00390000004987.n.a ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B ENSGT01030000234532.A.a.a.b Long-tailed chinchilla MODERN SPECIES 122 VSX1 (ENSCLAG00000015160) ACSS1 (ENSCLAG00000012190) APMAP (ENSCLAG00000013445) CST7 (ENSCLAG00000015428) SYNDIG1 (ENSCLAG00000012586) ENSCLAG00000012454 ENSCLAG00000015899 ENSCLAG00000017066 ENSCLAG00000015212 ENSCLAG00000015474 ENSCLAG00000011384 #17 CSTL1 (ENSCLAG00000012446) #18 NAPB (ENSCLAG00000011540) #19 GZF1 (ENSCLAG00000014714) #20 NXT1 (ENSCLAG00000012493) #21 CD93 (ENSCLAG00000012062) #22 THBD (ENSCLAG00000011994) FOXA2 (ENSCLAG00000014548) PAX1 (ENSCLAG00000016362) NKX2-2 (ENSCLAG00000016430) XRN2 (ENSCLAG00000013419) KIZ (ENSCLAG00000012565) RALGAPA2 (ENSCLAG00000012502) CFAP61 (ENSCLAG00000014155) CRNKL1 (ENSCLAG00000013859) NAA20 (ENSCLAG00000014313) RIN2 (ENSCLAG00000015234) SLC24A3 (ENSCLAG00000015547) DTD1 (ENSCLAG00000015302) SEC23B (ENSCLAG00000014924) RBBP9 (ENSCLAG00000014851) Degu MODERN SPECIES 114 VSX1 (ENSODEG00000010102) ACSS1 (ENSODEG00000010733) APMAP (ENSODEG00000010678) CST7 (ENSODEG00000011264) SYNDIG1 (ENSODEG00000012369) ENSODEG00000019797 CST3 (ENSODEG00000012334) ENSODEG00000010611 ENSODEG00000010448 ENSODEG00000012595 CST11 (ENSODEG00000013274) #17 CSTL1 (ENSODEG00000010719) #18 NAPB (ENSODEG00000011065) #19 GZF1 (ENSODEG00000013020) #20 NXT1 (ENSODEG00000019900) #21 CD93 (ENSODEG00000012518) #22 THBD (ENSODEG00000010709) FOXA2 (ENSODEG00000011162) PAX1 (ENSODEG00000012427) ENSODEG00000019878 ENSODEG00000019885 NKX2-2 (ENSODEG00000012371) ENSODEG00000012687 NKX2-4 (ENSODEG00000010842) ENSODEG00000010745 ENSODEG00000011188 KIZ (ENSODEG00000011491) RALGAPA2 (ENSODEG00000011023) INSM1 (ENSODEG00000020028) ENSODEG00000011346 ENSODEG00000012124 Guinea pig MODERN SPECIES 8 APMAP (ENSCPOG00000008131) CST7 (ENSCPOG00000008022) SYNDIG1 (ENSCPOG00000004943) ENSCPOG00000026799 ENSCPOG00000030984 ENSCPOG00000030716 ENSCPOG00000025294 ENSCPOG00000021926 CST8 (ENSCPOG00000005550) ENSCPOG00000025993 ENSCPOG00000003822 #17 CSTL1 (ENSCPOG00000008734) #18 NAPB (ENSCPOG00000039063) #19 GZF1 (ENSCPOG00000010790) #20 NXT1 (ENSCPOG00000008817) #21 CD93 (ENSCPOG00000010252) #22 THBD (ENSCPOG00000030575) FOXA2 (ENSCPOG00000033370) PAX1 (ENSCPOG00000002886) NKX2-2 (ENSCPOG00000000408) XRN2 (ENSCPOG00000009407) KIZ (ENSCPOG00000005683) RALGAPA2 (ENSCPOG00000001602) ENSCPOG00000038064 ENSCPOG00000039658 ENSCPOG00000001594 CRNKL1 (ENSCPOG00000004418) NAA20 (ENSCPOG00000001593) RIN2 (ENSCPOG00000013179) SLC24A3 (ENSCPOG00000011970) DTD1 (ENSCPOG00000002416) Lagomorpha ANCESTRAL SPECIES 57 ENSGT00940000154755.c.a ENSGT00940000161877 ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.B ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B ENSGT01030000234532.A.a.a.b ENSGT00940000154327.b.e.b ENSGT00940000153431.b ENSGT00390000006916.c ENSGT00390000014861 Rabbit MODERN SPECIES 15 ENSOCUG00000008071 ENSOCUG00000036359 ENSOCUG00000032386 ENSOCUG00000021033 ENSOCUG00000024585 ENSOCUG00000029526 ENSOCUG00000026263 CST8 (ENSOCUG00000024979) ENSOCUG00000027150 CSTL1 (ENSOCUG00000024430) #18 ENSOCUG00000025538 NAPB (ENSOCUG00000009263) #19 ENSOCUG00000025214 #20 NXT1 (ENSOCUG00000025924) #21 ENSOCUG00000024138 CD93 (ENSOCUG00000014812) #22 FOXA2 (ENSOCUG00000007368) PAX1 (ENSOCUG00000003276) NKX2-2 (ENSOCUG00000007166) ENSOCUG00000024195 XRN2 (ENSOCUG00000013468) KIZ (ENSOCUG00000013848) RALGAPA2 (ENSOCUG00000017951) CFAP61 (ENSOCUG00000015506) CRNKL1 (ENSOCUG00000015484) NAA20 (ENSOCUG00000015481) RIN2 (ENSOCUG00000015450) SLC24A3 (ENSOCUG00000009833) ENSOCUG00000035674 SCP2D1 (ENSOCUG00000010991) DTD1 (ENSOCUG00000010988) Pika MODERN SPECIES 6732 NXT1 (ENSOPRG00000006167) #21 CD93 (ENSOPRG00000006161) #22 FOXA2 (ENSOPRG00000006139) Tree shrew MODERN SPECIES 1130 CD93 (ENSTBEG00000014371) #22 Primates ANCESTRAL SPECIES 17 ENSGT00950000183147.B ENSGT00940000163410 ENSGT00940000154755.d ENSGT00940000164098 ENSGT00940000154755.c.b ENSGT00940000154755.c.a ENSGT00940000161877 ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B ENSGT01030000234532.A.a.a.b Strepsirrhini ANCESTRAL SPECIES 12 ENSGT00940000160277 ENSGT00950000183147.B ENSGT00940000163410 ENSGT00940000164098 ENSGT00940000154755.c.b ENSGT00940000154755.c.a ENSGT00940000161877 ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.B ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B ENSGT01030000234532.A.a.a.b Lemuriformes ANCESTRAL SPECIES 44 ENSGT00940000160277 ENSGT00950000183147.B ENSGT00940000163410 ENSGT00940000154755.c.b ENSGT00940000154755.c.a ENSGT00940000161877 ENSGT00940000163249 ENSGT00940000164098 ENSGT00940000162294 ENSGT00940000162636.B ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B ENSGT01030000234532.A.a.a.b Mouse lemur MODERN SPECIES 9 VSX1 (ENSMICG00000002047) ACSS1 (ENSMICG00000002040) APMAP (ENSMICG00000002038) CST7 (ENSMICG00000002037) SYNDIG1 (ENSMICG00000027578) ENSMICG00000032368 ENSMICG00000043235 ENSMICG00000004617 CST9 (ENSMICG00000047052) CST8 (ENSMICG00000017905) CST11 (ENSMICG00000017904) #17 CSTL1 (ENSMICG00000017903) #18 NAPB (ENSMICG00000017902) #19 GZF1 (ENSMICG00000046070) #20 NXT1 (ENSMICG00000044853) #21 CD93 (ENSMICG00000017898) #22 FOXA2 (ENSMICG00000030588) PAX1 (ENSMICG00000016968) NKX2-2 (ENSMICG00000045009) NKX2-4 (ENSMICG00000032695) XRN2 (ENSMICG00000008126) KIZ (ENSMICG00000008114) RALGAPA2 (ENSMICG00000006077) INSM1 (ENSMICG00000037992) CFAP61 (ENSMICG00000006057) CRNKL1 (ENSMICG00000006048) ENSMICG00000006044 RIN2 (ENSMICG00000006035) SLC24A3 (ENSMICG00000006014) DTD1 (ENSMICG00000010771) ENSMICG00000010750 Lemuriformes_a ANCESTRAL SPECIES 137 ENSGT00940000154755.c.a ENSGT00940000161877 ENSGT00940000163249 ENSGT00940000164098 ENSGT00940000162294 ENSGT00940000162636.B ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B ENSGT01030000234532.A.a.a.b Coquerels sifaka MODERN SPECIES 560 ENSPCOG00000018222 ENSPCOG00000001285 CST3 (ENSPCOG00000027602) CST9L (ENSPCOG00000008034) CST8 (ENSPCOG00000017881) CST11 (ENSPCOG00000025724) #17 CSTL1 (ENSPCOG00000016553) #18 NAPB (ENSPCOG00000022495) #19 GZF1 (ENSPCOG00000024180) #20 NXT1 (ENSPCOG00000025624) #21 CD93 (ENSPCOG00000022300) #22 FOXA2 (ENSPCOG00000001633) PAX1 (ENSPCOG00000027636) NKX2-2 (ENSPCOG00000016151) Greater bamboo lemur MODERN SPECIES 878 ENSPSMG00000008949 ENSPSMG00000008941 CST8 (ENSPSMG00000008931) ENSPSMG00000008923 CST11 (ENSPSMG00000008919) #17 CSTL1 (ENSPSMG00000008917) #18 NAPB (ENSPSMG00000008819) #19 GZF1 (ENSPSMG00000008681) #20 NXT1 (ENSPSMG00000008668) #21 CD93 (ENSPSMG00000008660) #22 THBD (ENSPSMG00000008649) SSTR4 (ENSPSMG00000008634) #23 FOXA2 (ENSPSMG00000008622) PAX1 (ENSPSMG00000008610) NKX2-2 (ENSPSMG00000008596) NKX2-4 (ENSPSMG00000008590) XRN2 (ENSPSMG00000008572) KIZ (ENSPSMG00000008514) ENSPSMG00000008491 RALGAPA2 (ENSPSMG00000008474) INSM1 (ENSPSMG00000008427) Bushbaby MODERN SPECIES 251 NAPB (ENSOGAG00000012607) #19 GZF1 (ENSOGAG00000028389) #20 NXT1 (ENSOGAG00000000717) #21 CD93 (ENSOGAG00000017109) #22 THBD (ENSOGAG00000026061) SSTR4 (ENSOGAG00000017105) #23 ENSOGAG00000025509 FOXA2 (ENSOGAG00000033297) PAX1 (ENSOGAG00000033162) NKX2-2 (ENSOGAG00000029474) ENSOGAG00000025951 NKX2-4 (ENSOGAG00000024342) XRN2 (ENSOGAG00000001068) KIZ (ENSOGAG00000010591) RALGAPA2 (ENSOGAG00000011557) INSM1 (ENSOGAG00000034802) ENSOGAG00000031837 CFAP61 (ENSOGAG00000011546) CRNKL1 (ENSOGAG00000011544) Haplorrhini ANCESTRAL SPECIES 13 ENSGT00440000039984.a ENSGT00940000160277 ENSGT00950000183147.B ENSGT00940000163410 ENSGT00940000154755.d ENSGT00940000164098 ENSGT00940000161877 ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B ENSGT01030000234532.A.a.a.b Tarsier MODERN SPECIES 4780 CST9 (ENSTSYG00000029266) CST8 (ENSTSYG00000000658) CST11 (ENSTSYG00000000187) #17 NAPB (ENSTSYG00000008750) #19 GZF1 (ENSTSYG00000028054) #20 NXT1 (ENSTSYG00000007592) #21 CD93 (ENSTSYG00000006459) #22 SSTR4 (ENSTSYG00000000585) #23 Simiiformes ANCESTRAL SPECIES 18 ENSGT00940000160277 ENSGT00950000183147.B ENSGT00940000164560 ENSGT00940000163410 ENSGT00940000154755.d ENSGT00940000164098 ENSGT00940000161877 ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B ENSGT01030000234532.A.a.a.b Catarrhini ANCESTRAL SPECIES 19 ENSGT00940000164560 ENSGT00940000163410 ENSGT00860000135650 ENSGT00940000154755.d ENSGT00940000164098 ENSGT00940000161877 ENSGT00940000166721 ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B ENSGT01030000234532.A.a.a.b Hominoidea ANCESTRAL SPECIES 17 ENSGT00940000163410.a.a ENSGT00860000135650 ENSGT00940000163410.a.b.a ENSGT00940000154755.d ENSGT00940000164098 ENSGT00940000161877 ENSGT00940000166721 ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B ENSGT01030000234532.A.a.a.b Hominidae ANCESTRAL SPECIES 18 ENSGT00860000135650 ENSGT00940000163410.a.b.a ENSGT00940000154755.d ENSGT00940000164098 ENSGT00940000161877 ENSGT00940000166721 ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00910000147439 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B ENSGT01030000234532.A.a.a.b Homo/Pan/Gorilla group ANCESTRAL SPECIES 16 ENSGT00860000135650 ENSGT00940000163410.a.b.a ENSGT00940000154755.d ENSGT00940000164098 ENSGT00940000161877 ENSGT00940000166721 ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041.g #21 ENSGT00910000147439 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00910000146844.a.b ENSGT00910000146941 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00910000148254 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00390000004987 ENSGT00550000074931 Gorilla MODERN SPECIES 444 ENSGGOG00000042714 CD93 (ENSGGOG00000044219) #22 Homo/Pan group ANCESTRAL SPECIES 17 ENSGT00860000135650 ENSGT00940000163410.a.b.a ENSGT00940000154755.d ENSGT00940000164098 ENSGT00940000161877 ENSGT00940000166721 ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041.g #21 ENSGT00910000147439 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00910000146844.a.b ENSGT00910000146941 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00910000148254 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00390000004987 ENSGT00550000074931 Human MODERN SPECIES 12 SYNDIG1 (ENSG00000101463) GGTLC1 (ENSG00000149435) CST5 (ENSG00000170367) CST2 (ENSG00000170369) CST1 (ENSG00000170373) CST4 (ENSG00000101441) CST3 (ENSG00000101439) CST9 (ENSG00000173335) CST9L (ENSG00000101435) CST8 (ENSG00000125815) CST11 (ENSG00000125831) #17 CSTL1 (ENSG00000125823) #18 NAPB (ENSG00000125814) #19 GZF1 (ENSG00000125812) #20 NXT1 (ENSG00000132661) #21 CD93 (ENSG00000125810) #22 THBD (ENSG00000178726) SSTR4 (ENSG00000132671) #23 FOXA2 (ENSG00000125798) PAX1 (ENSG00000125813) NKX2-2 (ENSG00000125820) NKX2-4 (ENSG00000125816) XRN2 (ENSG00000088930) KIZ (ENSG00000088970) RALGAPA2 (ENSG00000188559) INSM1 (ENSG00000173404) CFAP61 (ENSG00000089101) CRNKL1 (ENSG00000101343) NAA20 (ENSG00000173418) RIN2 (ENSG00000132669) SLC24A3 (ENSG00000185052) Pan ANCESTRAL SPECIES 15 ENSGT00860000135650 ENSGT00940000163410.a.b.a ENSGT00940000154755.d ENSGT00940000164098 ENSGT00940000161877 ENSGT00940000166721 ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041.g #21 ENSGT00910000147439 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00910000146844.a.b ENSGT00910000146941 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00910000148254 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 Bonobo MODERN SPECIES 11 ENSPPAG00000038530 CST4 (ENSPPAG00000035722) CST3 (ENSPPAG00000041092) CST9 (ENSPPAG00000037364) CST9L (ENSPPAG00000033681) ENSPPAG00000035983 ENSPPAG00000039408 CST8 (ENSPPAG00000037606) ENSPPAG00000034245 CST11 (ENSPPAG00000025372) #17 CSTL1 (ENSPPAG00000038564) #18 NAPB (ENSPPAG00000043876) #19 GZF1 (ENSPPAG00000028487) #20 NXT1 (ENSPPAG00000020479) #21 ENSPPAG00000024534 CD93 (ENSPPAG00000040099) #22 THBD (ENSPPAG00000018179) SSTR4 (ENSPPAG00000036986) #23 ENSPPAG00000031368 ENSPPAG00000024066 ENSPPAG00000043307 PAX1 (ENSPPAG00000035911) NKX2-2 (ENSPPAG00000039042) ENSPPAG00000037349 XRN2 (ENSPPAG00000033549) KIZ (ENSPPAG00000031020) RALGAPA2 (ENSPPAG00000039422) ENSPPAG00000036172 CRNKL1 (ENSPPAG00000027847) NAA20 (ENSPPAG00000016439) RIN2 (ENSPPAG00000037433) Chimpanzee MODERN SPECIES 11 ENSPTRG00000049771 CST1 (ENSPTRG00000013329) CST3 (ENSPTRG00000046564) CST9 (ENSPTRG00000013326) CST9L (ENSPTRG00000013325) ENSPTRG00000047084 ENSPTRG00000050976 CST8 (ENSPTRG00000013324) ENSPTRG00000045117 CST11 (ENSPTRG00000013323) #17 CSTL1 (ENSPTRG00000045776) #18 NAPB (ENSPTRG00000013321) #19 GZF1 (ENSPTRG00000013320) #20 NXT1 (ENSPTRG00000013319) #21 ENSPTRG00000046209 CD93 (ENSPTRG00000013318) #22 THBD (ENSPTRG00000013317) SSTR4 (ENSPTRG00000013316) #23 FOXA2 (ENSPTRG00000048023) ENSPTRG00000045139 ENSPTRG00000044291 PAX1 (ENSPTRG00000013311) NKX2-2 (ENSPTRG00000013310) NKX2-4 (ENSPTRG00000013309) ENSPTRG00000047508 XRN2 (ENSPTRG00000013308) ENSPTRG00000044546 KIZ (ENSPTRG00000046348) RALGAPA2 (ENSPTRG00000013306) CFAP61 (ENSPTRG00000013301) CRNKL1 (ENSPTRG00000030609) Orangutan MODERN SPECIES 11 CST4 (ENSPPYG00000011266) ENSPPYG00000039032 CST3 (ENSPPYG00000010776) CST9 (ENSPPYG00000010775) CST9L (ENSPPYG00000010773) ENSPPYG00000010772 ENSPPYG00000010771 CST8 (ENSPPYG00000010770) ENSPPYG00000037632 CST11 (ENSPPYG00000010769) #17 CSTL1 (ENSPPYG00000010768) #18 NAPB (ENSPPYG00000010767) #19 GZF1 (ENSPPYG00000010766) #20 NXT1 (ENSPPYG00000010765) #21 ENSPPYG00000010764 CD93 (ENSPPYG00000010763) #22 THBD (ENSPPYG00000010762) SSTR4 (ENSPPYG00000010761) #23 FOXA2 (ENSPPYG00000040463) PAX1 (ENSPPYG00000010758) NKX2-2 (ENSPPYG00000010757) NKX2-4 (ENSPPYG00000010756) XRN2 (ENSPPYG00000010755) KIZ (ENSPPYG00000010754) RALGAPA2 (ENSPPYG00000010751) INSM1 (ENSPPYG00000010750) CFAP61 (ENSPPYG00000010748) CRNKL1 (ENSPPYG00000010747) NAA20 (ENSPPYG00000010746) RIN2 (ENSPPYG00000010745) SLC24A3 (ENSPPYG00000010743) Gibbon MODERN SPECIES 3 ACSS1 (ENSNLEG00000015554) APMAP (ENSNLEG00000032557) CST7 (ENSNLEG00000015525) SYNDIG1 (ENSNLEG00000015521) CST5 (ENSNLEG00000015517) CST2 (ENSNLEG00000036132) CST3 (ENSNLEG00000035405) CST9 (ENSNLEG00000011616) CST8 (ENSNLEG00000011607) ENSNLEG00000033018 CST11 (ENSNLEG00000011603) #17 CSTL1 (ENSNLEG00000011597) #18 NAPB (ENSNLEG00000027099) #19 GZF1 (ENSNLEG00000011565) #20 ENSNLEG00000033556 CD93 (ENSNLEG00000011559) #22 THBD (ENSNLEG00000011558) SSTR4 (ENSNLEG00000018627) #23 ENSNLEG00000031709 ENSNLEG00000031487 PAX1 (ENSNLEG00000010049) NKX2-2 (ENSNLEG00000010048) ENSNLEG00000010047 XRN2 (ENSNLEG00000009991) KIZ (ENSNLEG00000009954) ENSNLEG00000033115 RALGAPA2 (ENSNLEG00000009931) CFAP61 (ENSNLEG00000009893) ENSNLEG00000009862 NAA20 (ENSNLEG00000028442) RIN2 (ENSNLEG00000009844) Cercopithecidae ANCESTRAL SPECIES 16 ENSGT00440000039984.a ENSGT00940000160277 ENSGT00950000183147.B ENSGT00940000164560 ENSGT00940000164098 ENSGT00940000161877 ENSGT00940000166721 ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183105.A.m.b ENSGT00950000183139.A ENSGT00940000162552 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B Cercopithecinae ANCESTRAL SPECIES 19 ENSGT00940000160277 ENSGT00950000183147.B ENSGT00940000164560 ENSGT00940000164098.a.a ENSGT00940000164098.a.b ENSGT00940000161877 ENSGT00940000166721 ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183105.A.m.b ENSGT00950000183139.A ENSGT00940000162552 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B Cercopithecinae_a ANCESTRAL SPECIES 18 ENSGT00940000161877.h ENSGT00940000164098.a.b ENSGT00860000135650.a ENSGT00940000154755.d ENSGT00940000163410 ENSGT00940000164098.a.a ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00950000183087.A.a.b.b.g.e.b.a.b ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00910000146941 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183105.A.m.b ENSGT00950000183139.A ENSGT00940000162552 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 Macaca ANCESTRAL SPECIES 16 ENSGT00940000154755.d ENSGT00860000135650.a ENSGT00940000163410 ENSGT00940000164098.a.a ENSGT00940000161877.g.b ENSGT00940000166721 ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00950000183087.A.a.b.b.g.e.b.a.b ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00910000146941 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183105.A.m.b ENSGT00950000183139.A ENSGT00940000162552 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 Pig-tailed macaque MODERN SPECIES 130 CST5 (ENSMNEG00000039359) CST9L (ENSMNEG00000032753) ENSMNEG00000044989 CST3 (ENSMNEG00000032382) ENSMNEG00000039431 ENSMNEG00000039062 CST9 (ENSMNEG00000039807) CST8 (ENSMNEG00000037697) ENSMNEG00000032864 CST11 (ENSMNEG00000041474) #17 CSTL1 (ENSMNEG00000044944) #18 NAPB (ENSMNEG00000036841) #19 GZF1 (ENSMNEG00000033117) #20 NXT1 (ENSMNEG00000027745) #21 ENSMNEG00000024687 CD93 (ENSMNEG00000042460) #22 SSTR4 (ENSMNEG00000038323) #23 FOXA2 (ENSMNEG00000011763) ENSMNEG00000028347 PAX1 (ENSMNEG00000040896) NKX2-2 (ENSMNEG00000045238) NKX2-4 (ENSMNEG00000028280) XRN2 (ENSMNEG00000040626) KIZ (ENSMNEG00000028617) ENSMNEG00000039122 RALGAPA2 (ENSMNEG00000033398) INSM1 (ENSMNEG00000029140) CFAP61 (ENSMNEG00000036910) CRNKL1 (ENSMNEG00000037490) NAA20 (ENSMNEG00000033202) RIN2 (ENSMNEG00000005068) Macaca_a ANCESTRAL SPECIES 18 ENSGT00940000163410.c ENSGT00940000154755.d ENSGT00860000135650.a ENSGT00940000163410.d ENSGT00940000164098.a.a ENSGT00940000166721.a ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00950000183087.A.a.b.b.g.e.b.a.b ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00910000146941 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B Rhesus MODERN SPECIES 1 CST9L (ENSMMUG00000045312) ENSMMUG00000063629 ENSMMUG00000050726 CST3 (ENSMMUG00000050596) ENSMMUG00000046980 CST9 (ENSMMUG00000039259) ENSMMUG00000063687 ENSMMUG00000059402 CST8 (ENSMMUG00000016489) ENSMMUG00000016490 CST11 (ENSMMUG00000022393) #17 CSTL1 (ENSMMUG00000055975) #18 NAPB (ENSMMUG00000022388) #19 GZF1 (ENSMMUG00000022387) #20 NXT1 (ENSMMUG00000022386) #21 CD93 (ENSMMUG00000016813) #22 THBD (ENSMMUG00000016814) SSTR4 (ENSMMUG00000016815) #23 FOXA2 (ENSMMUG00000010410) PAX1 (ENSMMUG00000019409) ENSMMUG00000056728 NKX2-4 (ENSMMUG00000011409) XRN2 (ENSMMUG00000011405) KIZ (ENSMMUG00000002060) RALGAPA2 (ENSMMUG00000018371) INSM1 (ENSMMUG00000039294) CFAP61 (ENSMMUG00000042668) CRNKL1 (ENSMMUG00000007709) NAA20 (ENSMMUG00000007708) RIN2 (ENSMMUG00000010114) ENSMMUG00000051129 Crab-eating macaque MODERN SPECIES 1 ENSMFAG00000032358 CST3 (ENSMFAG00000062094) ENSMFAG00000001311 ENSMFAG00000051852 ENSMFAG00000055858 ENSMFAG00000061186 CST8 (ENSMFAG00000033001) ENSMFAG00000032810 CST11 (ENSMFAG00000038093) #17 CSTL1 (ENSMFAG00000057818) #18 NAPB (ENSMFAG00000012865) #19 ENSMFAG00000058516 GZF1 (ENSMFAG00000042408) #20 NXT1 (ENSMFAG00000065310) #21 ENSMFAG00000026040 CD93 (ENSMFAG00000043644) #22 SSTR4 (ENSMFAG00000017458) #23 FOXA2 (ENSMFAG00000047214) ENSMFAG00000057184 PAX1 (ENSMFAG00000044435) NKX2-2 (ENSMFAG00000044462) XRN2 (ENSMFAG00000038122) KIZ (ENSMFAG00000036086) RALGAPA2 (ENSMFAG00000039275) CFAP61 (ENSMFAG00000040250) CRNKL1 (ENSMFAG00000039893) RIN2 (ENSMFAG00000002995) ENSMFAG00000065169 SLC24A3 (ENSMFAG00000037051) SCP2D1 (ENSMFAG00000050245) ENSMFAG00000034375 Cercopithecinae_b ANCESTRAL SPECIES 12 ENSGT00940000166721 ENSGT00940000161877.h ENSGT00940000164098.a.b ENSGT00940000154755.d ENSGT00860000135650.a ENSGT00940000163410 ENSGT00940000164098.a.a ENSGT00940000162294 ENSGT00940000162636.A ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00950000183087.A.a.b.b.g.e.b.a.b ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00910000146941 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183105.A.m.b ENSGT00950000183139.A ENSGT00940000162552 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 Olive baboon MODERN SPECIES 7 SYNDIG1 (ENSPANG00000047245) ENSPANG00000048046 APMAP (ENSPANG00000051418) CST7 (ENSPANG00000042634) ACSS1 (ENSPANG00000017910) VSX1 (ENSPANG00000021775) ENTPD6 (ENSPANG00000026175) ENSPANG00000045994 PYGB (ENSPANG00000024585) ABHD12 (ENSPANG00000001312) GINS1 (ENSPANG00000032488) NINL (ENSPANG00000016039) ENSPANG00000044377 NANP (ENSPANG00000031862) ENSPANG00000048820 CD93 (ENSPANG00000018432) #22 THBD (ENSPANG00000046781) SSTR4 (ENSPANG00000004090) #23 ENSPANG00000044373 FOXA2 (ENSPANG00000011847) PAX1 (ENSPANG00000008282) ENSPANG00000043988 NKX2-4 (ENSPANG00000014236) XRN2 (ENSPANG00000018088) KIZ (ENSPANG00000025535) ENSPANG00000050604 RALGAPA2 (ENSPANG00000018089) ENSPANG00000046512 CFAP61 (ENSPANG00000024586) ENSPANG00000045223 CRNKL1 (ENSPANG00000017420) Cercopithecinae_d ANCESTRAL SPECIES 2 ENSGT00940000166721 ENSGT00940000161877.h ENSGT00940000164098.a.b ENSGT00940000163410 ENSGT00860000135650.a ENSGT00940000154755.d ENSGT00940000164098.a.a ENSGT00940000162294 ENSGT00940000162636.A ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00950000183087.A.a.b.b.g.e.b.a.b ENSGT00940000156996 #22 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00910000146941 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183105.A.m.b ENSGT00950000183139.A ENSGT00940000162552 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B Sooty mangabey MODERN SPECIES 602 CST9L (ENSCATG00000032932) ENSCATG00000035179 ENSCATG00000035785 ENSCATG00000036042 CST3 (ENSCATG00000032215) ENSCATG00000043016 ENSCATG00000033110 CST8 (ENSCATG00000033479) ENSCATG00000043404 CST11 (ENSCATG00000042927) #17 CSTL1 (ENSCATG00000031751) #18 NAPB (ENSCATG00000042262) #19 GZF1 (ENSCATG00000039279) #20 NXT1 (ENSCATG00000019026) #21 ENSCATG00000019258 CD93 (ENSCATG00000009216) #22 SSTR4 (ENSCATG00000019242) #23 FOXA2 (ENSCATG00000033454) ENSCATG00000022190 PAX1 (ENSCATG00000029185) NKX2-2 (ENSCATG00000041599) NKX2-4 (ENSCATG00000023019) XRN2 (ENSCATG00000040350) KIZ (ENSCATG00000042535) ENSCATG00000043761 RALGAPA2 (ENSCATG00000035357) INSM1 (ENSCATG00000037816) CFAP61 (ENSCATG00000043610) CRNKL1 (ENSCATG00000034247) NAA20 (ENSCATG00000027935) RIN2 (ENSCATG00000042503) Drill MODERN SPECIES 1652 ENSMLEG00000027361 CD93 (ENSMLEG00000031294) #22 FOXA2 (ENSMLEG00000030410) Vervet Monkey MODERN SPECIES 11 IDH3B (ENSCSAG00000010969) EBF4 (ENSCSAG00000010974) CPXM1 (ENSCSAG00000010982) SYNDIG1 (ENSCSAG00000010985) CST5 (ENSCSAG00000010994) ENSCSAG00000011001 ENSCSAG00000011012 CST9L (ENSCSAG00000011017) ENSCSAG00000011022 ENSCSAG00000011025 CST3 (ENSCSAG00000011027) ENSCSAG00000011032 ENSCSAG00000011037 GZF1 (ENSCSAG00000011054) #20 NXT1 (ENSCSAG00000018678) #21 CD93 (ENSCSAG00000011058) #22 THBD (ENSCSAG00000018677) SSTR4 (ENSCSAG00000018676) #23 FOXA2 (ENSCSAG00000011062) PAX1 (ENSCSAG00000011068) NKX2-2 (ENSCSAG00000011072) NKX2-4 (ENSCSAG00000011080) XRN2 (ENSCSAG00000011094) KIZ (ENSCSAG00000011135) RALGAPA2 (ENSCSAG00000011248) INSM1 (ENSCSAG00000018675) CFAP61 (ENSCSAG00000011382) CRNKL1 (ENSCSAG00000011434) NAA20 (ENSCSAG00000011440) RIN2 (ENSCSAG00000011446) ENSCSAG00000011450 Rhinopithecus ANCESTRAL SPECIES 176 ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000155999 ENSGT00950000183087.A.b.b ENSGT00910000146941 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183105.A.m.b ENSGT00950000183139.A ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B ENSGT01030000234532.A.a.a.b Golden snub-nosed monkey MODERN SPECIES 1446 CST8 (ENSRROG00000030761) ENSRROG00000037494 CST11 (ENSRROG00000029851) #17 CSTL1 (ENSRROG00000032535) #18 NAPB (ENSRROG00000044287) #19 GZF1 (ENSRROG00000030533) #20 NXT1 (ENSRROG00000026657) #21 CD93 (ENSRROG00000012087) #22 FOXA2 (ENSRROG00000024272) ENSRROG00000030464 ENSRROG00000040808 PAX1 (ENSRROG00000038854) NKX2-2 (ENSRROG00000041150) NKX2-4 (ENSRROG00000006364) XRN2 (ENSRROG00000044400) ENSRROG00000030791 ENSRROG00000041676 RALGAPA2 (ENSRROG00000037467) CFAP61 (ENSRROG00000040251) CRNKL1 (ENSRROG00000040450) NAA20 (ENSRROG00000036514) Black snub-nosed monkey MODERN SPECIES 2074 ENSRBIG00000033700 CST8 (ENSRBIG00000044719) ENSRBIG00000044901 CST11 (ENSRBIG00000037634) #17 CSTL1 (ENSRBIG00000038994) #18 NAPB (ENSRBIG00000040673) #19 GZF1 (ENSRBIG00000028715) #20 NXT1 (ENSRBIG00000021433) #21 CD93 (ENSRBIG00000006468) #22 ENSRBIG00000025242 CDH8 (ENSRBIG00000030891) Platyrrhini ANCESTRAL SPECIES 11 ENSGT00940000160277 ENSGT00950000183147.B ENSGT00940000164560 ENSGT00940000163410 ENSGT00940000154755.d ENSGT00940000164098 ENSGT00940000161877 ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B ENSGT01030000234532.A.a.a.b Cebidae ANCESTRAL SPECIES 13 ENSGT00940000160277 ENSGT00950000183147.B ENSGT00940000164560 ENSGT00940000163410 ENSGT00940000154755.d ENSGT00940000164098 ENSGT00940000161877 ENSGT00940000163249 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B ENSGT01030000234532.A.a.a.b Cebidae_a ANCESTRAL SPECIES 2 ENSGT00440000039984.a ENSGT00940000160277 ENSGT00950000183147.B ENSGT00940000164560 ENSGT00940000163410 ENSGT00940000154755.d ENSGT00940000164098 ENSGT00940000161877 ENSGT00940000162294 ENSGT00940000162636.A ENSGT00910000144356 #17 ENSGT00900000141212 #18 ENSGT00390000005826.a.b #19 ENSGT00870000136554 #20 ENSGT00940000162041 #21 ENSGT00940000156996 #22 ENSGT00940000163276 ENSGT00940000156819.a.a #23 ENSGT00940000155999 ENSGT00940000159137 ENSGT00940000159727 ENSGT00940000162247 ENSGT00670000098098 ENSGT00390000010121 ENSGT00950000183139.A ENSGT00940000162552 ENSGT00390000004987 ENSGT00550000074931 ENSGT00550000075046 ENSGT00940000154866.B ENSGT01030000234532.A.a.a.b Capuchin MODERN SPECIES 134 APMAP (ENSCCAG00000023838) CST7 (ENSCCAG00000027578) SYNDIG1 (ENSCCAG00000028638) CST5 (ENSCCAG00000034182) ENSCCAG00000033223 CST3 (ENSCCAG00000001843) CST9 (ENSCCAG00000024829) CST9L (ENSCCAG00000026509) CST8 (ENSCCAG00000024862) ENSCCAG00000037786 CST11 (ENSCCAG00000035766) #17 CSTL1 (ENSCCAG00000033212) #18 NAPB (ENSCCAG00000029344) #19 GZF1 (ENSCCAG00000035601) #20 NXT1 (ENSCCAG00000015478) #21 CD93 (ENSCCAG00000034013) #22 THBD (ENSCCAG00000020711) SSTR4 (ENSCCAG00000019059) #23 FOXA2 (ENSCCAG00000027576) PAX1 (ENSCCAG00000025569) NKX2-2 (ENSCCAG00000035862) NKX2-4 (ENSCCAG00000032197) ENSCCAG00000036857 KIZ (ENSCCAG00000031682) RALGAPA2 (ENSCCAG00000028362) INSM1 (ENSCCAG00000023181) CFAP61 (ENSCCAG00000026777) CRNKL1 (ENSCCAG00000027037) NAA20 (ENSCCAG00000028274) Bolivian squirrel monkey MODERN SPECIES 211 APMAP (ENSSBOG00000035251) CST7 (ENSSBOG00000021587) SYNDIG1 (ENSSBOG00000023812) CST5 (ENSSBOG00000022942) ENSSBOG00000028716 CST3 (ENSSBOG00000030007) CST9 (ENSSBOG00000020759) CST9L (ENSSBOG00000020799) CST8 (ENSSBOG00000021877) ENSSBOG00000025115 CST11 (ENSSBOG00000025613) #17 CSTL1 (ENSSBOG00000006474) #18 NAPB (ENSSBOG00000019980) #19 GZF1 (ENSSBOG00000018893) #20 NXT1 (ENSSBOG00000036378) #21 CD93 (ENSSBOG00000018965) #22 SSTR4 (ENSSBOG00000013012) #23 FOXA2 (ENSSBOG00000024799) Marmoset MODERN SPECIES 17 CST7 (ENSCJAG00000048473) APMAP (ENSCJAG00000085161) SYNDIG1 (ENSCJAG00000046278) CST5 (ENSCJAG00000037422) ENSCJAG00000000676 CST3 (ENSCJAG00000036809) CST9 (ENSCJAG00000084681) ENSCJAG00000078884 CST8 (ENSCJAG00000000697) ENSCJAG00000074097 CST11 (ENSCJAG00000080392) #17 CSTL1 (ENSCJAG00000041540) #18 NAPB (ENSCJAG00000000712) #19 GZF1 (ENSCJAG00000000733) #20 NXT1 (ENSCJAG00000044836) #21 CD93 (ENSCJAG00000005796) #22 THBD (ENSCJAG00000005795) FOXA2 (ENSCJAG00000005785) ENSCJAG00000070048 ENSCJAG00000075555 PAX1 (ENSCJAG00000005773) ENSCJAG00000070559 ENSCJAG00000076879 ENSCJAG00000051781 ENSCJAG00000081459 NKX2-4 (ENSCJAG00000040336) XRN2 (ENSCJAG00000005611) KIZ (ENSCJAG00000005568) RALGAPA2 (ENSCJAG00000005471) INSM1 (ENSCJAG00000040556) CFAP61 (ENSCJAG00000005444) Mas night monkey MODERN SPECIES 720 CD93 (ENSANAG00000031974) #22 SSTR4 (ENSANAG00000031033) #23 FOXA2 (ENSANAG00000000151) PAX1 (ENSANAG00000031911) NKX2-2 (ENSANAG00000031496) NKX2-4 (ENSANAG00000025954) XRN2 (ENSANAG00000020126) KIZ (ENSANAG00000030324) RALGAPA2 (ENSANAG00000035297) ENSANAG00000025204 INSM1 (ENSANAG00000021754) ENSANAG00000026688 ENSANAG00000033104 ENSANAG00000023984 CRNKL1 (ENSANAG00000024889) ENSANAG00000021111