Boreoeutheria	ANCESTRAL SPECIES		ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Euarchontoglires	ANCESTRAL SPECIES		ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Glires	ANCESTRAL SPECIES		ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Rodentia	ANCESTRAL SPECIES		ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Rodentia_B	ANCESTRAL SPECIES		ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Myomorpha	ANCESTRAL SPECIES	12	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Muroidea	ANCESTRAL SPECIES	6	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Muroidea_A	ANCESTRAL SPECIES	5	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Murinae	ANCESTRAL SPECIES	5	ENSGT00900000141033.b.b.u	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Mus	ANCESTRAL SPECIES	7	ENSGT00900000141033.b.b.v	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a.b	ENSGT00950000182844.b.b.a.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346
Mus_A	ANCESTRAL SPECIES	9	ENSGT00900000141033.b.b.v	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131.e #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a.b	ENSGT00950000182844.b.b.a.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346
Mus_B	ANCESTRAL SPECIES	8	ENSGT00900000141033.b.b.v	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131.e #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a.b	ENSGT00950000182844.b.b.a.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346
Mus_C	ANCESTRAL SPECIES	6	ENSGT00900000141033.b.b.v	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131.e #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a.b	ENSGT00950000182844.b.b.a.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346
Steppe mouse	MODERN SPECIES	2494						Syt11 (ENSMSIG00000028436) #12	Rit1 (ENSMSIG00000028448) #13	Khdc4 (ENSMSIG00000028451) #14	ENSMSIG00000028469 #15	Arhgef2 (ENSMSIG00000028473) #16	Ssr2 (ENSMSIG00000029173) #17	Ubqln4 (ENSMSIG00000029187) #18	Lamtor2 (ENSMSIG00000029190) #19	Rab25 (ENSMSIG00000029192) #20	ENSMSIG00000029193 #21	Lmna (ENSMSIG00000029196) #22	Sema4a (ENSMSIG00000029207) #23	ENSMSIG00000029223 #24	Slc25a44 (ENSMSIG00000029225) #25	Pmf1 (ENSMSIG00000029235) #26	ENSMSIG00000029238 #27	ENSMSIG00000029245 #28	Smg5 (ENSMSIG00000029250) #29	Tmem79 (ENSMSIG00000029273) #30	Glmp (ENSMSIG00000029280) #31	Cct3 (ENSMSIG00000029307) #32	ENSMSIG00000029349 #33
spretus	MODERN SPECIES	12	MGP_SPRETEiJ_G0026127	Ash1l (MGP_SPRETEiJ_G0026126)	Dap3 (MGP_SPRETEiJ_G0026125)	Msto1 (MGP_SPRETEiJ_G0026124)	Gon4l (MGP_SPRETEiJ_G0026123)	Syt11 (MGP_SPRETEiJ_G0026122) #12	Rit1 (MGP_SPRETEiJ_G0026121) #13	Khdc4 (MGP_SPRETEiJ_G0026120) #14	Rxfp4 (MGP_SPRETEiJ_G0026119)	Arhgef2 (MGP_SPRETEiJ_G0026118) #16	Ssr2 (MGP_SPRETEiJ_G0026117) #17	Ubqln4 (MGP_SPRETEiJ_G0026116) #18	Lamtor2 (MGP_SPRETEiJ_G0026115) #19	Rab25 (MGP_SPRETEiJ_G0026114) #20	MGP_SPRETEiJ_G0026113 #21	Lmna (MGP_SPRETEiJ_G0026112) #22	Sema4a (MGP_SPRETEiJ_G0026111) #23	Slc25a44 (MGP_SPRETEiJ_G0026110) #25	Pmf1 (MGP_SPRETEiJ_G0026109) #26	MGP_SPRETEiJ_G0026107 #27	MGP_SPRETEiJ_G0026108 #27	MGP_SPRETEiJ_G0026106 #27	Paqr6 (MGP_SPRETEiJ_G0026105) #28	Smg5 (MGP_SPRETEiJ_G0026104) #29	Tmem79 (MGP_SPRETEiJ_G0026103) #30	Glmp (MGP_SPRETEiJ_G0026102) #31	Cct3 (MGP_SPRETEiJ_G0026101) #32	Tsacc (MGP_SPRETEiJ_G0026100) #33	MGP_SPRETEiJ_G0026099	Rhbg (MGP_SPRETEiJ_G0026098)	Mef2d (MGP_SPRETEiJ_G0026097)
Mouse	MODERN SPECIES	12	Rusc1 (ENSMUSG00000041263)	Ash1l (ENSMUSG00000028053)	Dap3 (ENSMUSG00000068921)	Msto1 (ENSMUSG00000068922)	Gon4l (ENSMUSG00000054199)	Syt11 (ENSMUSG00000068923) #12	Rit1 (ENSMUSG00000028057) #13	Khdc4 (ENSMUSG00000028060) #14	Rxfp4 (ENSMUSG00000049741)	Arhgef2 (ENSMUSG00000028059) #16	Ssr2 (ENSMUSG00000041355) #17	Ubqln4 (ENSMUSG00000008604) #18	Lamtor2 (ENSMUSG00000028062) #19	Rab25 (ENSMUSG00000008601) #20	Mex3a (ENSMUSG00000074480) #21	Lmna (ENSMUSG00000028063) #22	Sema4a (ENSMUSG00000028064) #23	Slc25a44 (ENSMUSG00000050144) #25	Pmf1 (ENSMUSG00000028066) #26	Bglap (ENSMUSG00000074483) #27	Bglap2 (ENSMUSG00000074486) #27	Bglap3 (ENSMUSG00000074489) #27	Paqr6 (ENSMUSG00000041423) #28	Smg5 (ENSMUSG00000001415) #29	Tmem79 (ENSMUSG00000001420) #30	Glmp (ENSMUSG00000001418) #31	Cct3 (ENSMUSG00000001416) #32	Tsacc (ENSMUSG00000010538) #33	Gm38392 (ENSMUSG00000103766)	Rhbg (ENSMUSG00000104445)	Mef2d (ENSMUSG00000001419)
Ryukyu mouse	MODERN SPECIES	12	MGP_CAROLIEiJ_G0025184	Ash1l (MGP_CAROLIEiJ_G0025183)	Dap3 (MGP_CAROLIEiJ_G0025182)	Msto1 (MGP_CAROLIEiJ_G0025181)	MGP_CAROLIEiJ_G0025180	Syt11 (MGP_CAROLIEiJ_G0025179) #12	Rit1 (MGP_CAROLIEiJ_G0025178) #13	Khdc4 (MGP_CAROLIEiJ_G0025177) #14	Rxfp4 (MGP_CAROLIEiJ_G0025176)	Arhgef2 (MGP_CAROLIEiJ_G0025175) #16	Ssr2 (MGP_CAROLIEiJ_G0025174) #17	Ubqln4 (MGP_CAROLIEiJ_G0025173) #18	Lamtor2 (MGP_CAROLIEiJ_G0025172) #19	Rab25 (MGP_CAROLIEiJ_G0025171) #20	Mex3a (MGP_CAROLIEiJ_G0025170) #21	Lmna (MGP_CAROLIEiJ_G0025169) #22	Sema4a (MGP_CAROLIEiJ_G0025168) #23	Slc25a44 (MGP_CAROLIEiJ_G0025167) #25	Pmf1 (MGP_CAROLIEiJ_G0025166) #26	MGP_CAROLIEiJ_G0025165 #27	Paqr6 (MGP_CAROLIEiJ_G0025164) #28	Smg5 (MGP_CAROLIEiJ_G0025163) #29	Tmem79 (MGP_CAROLIEiJ_G0025162) #30	Glmp (MGP_CAROLIEiJ_G0025161) #31	Cct3 (MGP_CAROLIEiJ_G0025160) #32	Tsacc (MGP_CAROLIEiJ_G0025159) #33	MGP_CAROLIEiJ_G0025158	Rhbg (MGP_CAROLIEiJ_G0025157)	Mef2d (MGP_CAROLIEiJ_G0025156)	Iqgap3 (MGP_CAROLIEiJ_G0025155)	MGP_CAROLIEiJ_G0025154
Shrew mouse	MODERN SPECIES	17	Rusc1 (MGP_PahariEiJ_G0026629)	MGP_PahariEiJ_G0026628	Ash1l (MGP_PahariEiJ_G0026627)	Dap3 (MGP_PahariEiJ_G0026626)	MGP_PahariEiJ_G0026625	Gon4l (MGP_PahariEiJ_G0026624)	Syt11 (MGP_PahariEiJ_G0026623) #12	Rit1 (MGP_PahariEiJ_G0026622) #13	Khdc4 (MGP_PahariEiJ_G0026621) #14	Arhgef2 (MGP_PahariEiJ_G0026620) #16	Ssr2 (MGP_PahariEiJ_G0026619) #17	Ubqln4 (MGP_PahariEiJ_G0026618) #18	Lamtor2 (MGP_PahariEiJ_G0026617) #19	Rab25 (MGP_PahariEiJ_G0026616) #20	Mex3a (MGP_PahariEiJ_G0026615) #21	Lmna (MGP_PahariEiJ_G0026614) #22	Sema4a (MGP_PahariEiJ_G0026613) #23	Slc25a44 (MGP_PahariEiJ_G0026612) #25	Pmf1 (MGP_PahariEiJ_G0026611) #26	MGP_PahariEiJ_G0026609 #27	MGP_PahariEiJ_G0026610 #27	Paqr6 (MGP_PahariEiJ_G0026607) #28	Smg5 (MGP_PahariEiJ_G0026606) #29	Tmem79 (MGP_PahariEiJ_G0026605) #30	Glmp (MGP_PahariEiJ_G0026604) #31	MGP_PahariEiJ_G0026603 #32	Tsacc (MGP_PahariEiJ_G0026602) #33	MGP_PahariEiJ_G0026601	Rhbg (MGP_PahariEiJ_G0026600)	Mef2d (MGP_PahariEiJ_G0026599)	Iqgap3 (MGP_PahariEiJ_G0026598)
Rat	MODERN SPECIES	11	Pklr (ENSRNOG00000020420)	Fdps (ENSRNOG00000043377)	Ash1l (ENSRNOG00000020386)	Dap3 (ENSRNOG00000020373)	Msto1 (ENSRNOG00000020357)	Gon4l (ENSRNOG00000020297)	Syt11 (ENSRNOG00000020279) #12	Rit1 (ENSRNOG00000064584) #13	Khdc4 (ENSRNOG00000020139) #14	Arhgef2 (ENSRNOG00000020027) #16	Ssr2 (ENSRNOG00000019940) #17	Ubqln4 (ENSRNOG00000019933) #18	Lamtor2 (ENSRNOG00000019908) #19	Rab25 (ENSRNOG00000023640) #20	Mex3a (ENSRNOG00000058654) #21	Lmna (ENSRNOG00000019638) #22	Sema4a (ENSRNOG00000019737) #23	Slc25a44 (ENSRNOG00000025269) #25	Pmf1 (ENSRNOG00000019620) #26	Bglap (ENSRNOG00000019607) #27	Paqr6 (ENSRNOG00000026059) #28	Smg5 (ENSRNOG00000019590) #29	Tmem79 (ENSRNOG00000019414) #30	Glmp (ENSRNOG00000019281) #31	Cct3 (ENSRNOG00000019090) #32	Tsacc (ENSRNOG00000037552) #33	Rhbg (ENSRNOG00000019412)	Mef2d (ENSRNOG00000031778)	Iqgap3 (ENSRNOG00000027894)	Ttc24 (ENSRNOG00000028765)	Naxe (ENSRNOG00000019201)
Cricetidae	ANCESTRAL SPECIES	6	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224.x #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Cricetinae	ANCESTRAL SPECIES	13	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224.x #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Chinese hamster chok1gshd	MODERN SPECIES	352	Rusc1 (ENSCGRG00001009459)	Ash1l (ENSCGRG00001011192)	Dap3 (ENSCGRG00001022521)	Msto1 (ENSCGRG00001015681)	Gon4l (ENSCGRG00001023253)	Syt11 (ENSCGRG00001023824) #12	Rit1 (ENSCGRG00001004542) #13	Khdc4 (ENSCGRG00001012564) #14	Rxfp4 (ENSCGRG00001002374)	Arhgef2 (ENSCGRG00001006987) #16	Ssr2 (ENSCGRG00001006822) #17	Ubqln4 (ENSCGRG00001019653) #18	Lamtor2 (ENSCGRG00001008748) #19	Rab25 (ENSCGRG00001017341) #20	Mex3a (ENSCGRG00001000412) #21	Lmna (ENSCGRG00001003129) #22	Sema4a (ENSCGRG00001020918) #23	Slc25a44 (ENSCGRG00001021651) #25	Pmf1 (ENSCGRG00001010918) #26	ENSCGRG00001014532 #27	Paqr6 (ENSCGRG00001016796) #28	Smg5 (ENSCGRG00001006336) #29	Tmem79 (ENSCGRG00001024551) #30	Glmp (ENSCGRG00001007094) #31	Cct3 (ENSCGRG00001015935) #32	Tsacc (ENSCGRG00001019825) #33	Rhbg (ENSCGRG00001000730)	Mef2d (ENSCGRG00001013661)	Iqgap3 (ENSCGRG00001021083)	ENSCGRG00001013450	Naxe (ENSCGRG00001023331)
Golden Hamster	MODERN SPECIES	714	Pklr (ENSMAUG00000012808)	Fdps (ENSMAUG00000020872)	ENSMAUG00000017088	Ash1l (ENSMAUG00000000702)	Msto1 (ENSMAUG00000020345)	ENSMAUG00000000631	ENSMAUG00000013419 #12	Rit1 (ENSMAUG00000000572) #13	Khdc4 (ENSMAUG00000019676) #14	ENSMAUG00000013645 #16	ENSMAUG00000019940 #16	Ssr2 (ENSMAUG00000021161) #17	Ubqln4 (ENSMAUG00000007686) #18	Lamtor2 (ENSMAUG00000000547) #19	Mex3a (ENSMAUG00000012601) #21	Lmna (ENSMAUG00000012838) #22	ENSMAUG00000017061 #23	Slc25a44 (ENSMAUG00000021047) #25	Pmf1 (ENSMAUG00000019629) #26	ENSMAUG00000015288 #27	Paqr6 (ENSMAUG00000010297) #28	Smg5 (ENSMAUG00000010381) #29	Tmem79 (ENSMAUG00000014791) #30	ENSMAUG00000014449 #32	Tsacc (ENSMAUG00000016723) #33	Rhbg (ENSMAUG00000009341)	Mef2d (ENSMAUG00000016452)	Iqgap3 (ENSMAUG00000008455)	ENSMAUG00000018760	Naxe (ENSMAUG00000018064)	ENSMAUG00000008406
Cricetidae_B	ANCESTRAL SPECIES	3	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224.x #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Prairie vole	MODERN SPECIES	8								ENSMOCG00000007816 #14	ENSMOCG00000019234 #16	ENSMOCG00000020991 #16	Ssr2 (ENSMOCG00000001890) #17	ENSMOCG00000013140 #18	Lamtor2 (ENSMOCG00000018988) #19	Rab25 (ENSMOCG00000010953) #20	Mex3a (ENSMOCG00000017881) #21	Lmna (ENSMOCG00000011854) #22	Sema4a (ENSMOCG00000022467) #23	Slc25a44 (ENSMOCG00000014671) #25	ENSMOCG00000018426 #26	ENSMOCG00000019680 #27	Paqr6 (ENSMOCG00000006437) #28	Smg5 (ENSMOCG00000016590) #29	Tmem79 (ENSMOCG00000017414) #30	Glmp (ENSMOCG00000009096) #31	Cct3 (ENSMOCG00000010144) #32	Tsacc (ENSMOCG00000013419) #33	ENSMOCG00000022002	Rhbg (ENSMOCG00000005326)	ENSMOCG00000008030	Mef2d (ENSMOCG00000003757)	Iqgap3 (ENSMOCG00000020658)
Northern American deer mouse	MODERN SPECIES	19	Rusc1 (ENSPEMG00000018232)	Ash1l (ENSPEMG00000006789)	ENSPEMG00000019185	Msto1 (ENSPEMG00000016178)	Gon4l (ENSPEMG00000017252)	Syt11 (ENSPEMG00000003809) #12	Rit1 (ENSPEMG00000030433) #13	Khdc4 (ENSPEMG00000007794) #14	Rxfp4 (ENSPEMG00000011662)	Arhgef2 (ENSPEMG00000002997) #16	Ssr2 (ENSPEMG00000012464) #17	Ubqln4 (ENSPEMG00000016759) #18	Lamtor2 (ENSPEMG00000009818) #19	Rab25 (ENSPEMG00000007548) #20	Mex3a (ENSPEMG00000019014) #21	Lmna (ENSPEMG00000015821) #22	Sema4a (ENSPEMG00000015516) #23	Slc25a44 (ENSPEMG00000013362) #25	Pmf1 (ENSPEMG00000012625) #26	ENSPEMG00000025586 #27	Paqr6 (ENSPEMG00000002777) #28	Smg5 (ENSPEMG00000001819) #29	Tmem79 (ENSPEMG00000007739) #30	Glmp (ENSPEMG00000013529) #31	Cct3 (ENSPEMG00000015732) #32	Tsacc (ENSPEMG00000014593) #33	Rhbg (ENSPEMG00000011996)	Mef2d (ENSPEMG00000019035)	Iqgap3 (ENSPEMG00000016406)	ENSPEMG00000017615	Naxe (ENSPEMG00000018271)
Upper Galilee mountains blind mole rat	MODERN SPECIES	497	Rusc1 (ENSNGAG00000008260)	Ash1l (ENSNGAG00000021986)	Dap3 (ENSNGAG00000014173)	Msto1 (ENSNGAG00000022769)	Gon4l (ENSNGAG00000020844)	Syt11 (ENSNGAG00000013529) #12	Rit1 (ENSNGAG00000013104) #13	Khdc4 (ENSNGAG00000012421) #14	ENSNGAG00000011350 #16	ENSNGAG00000009107 #16	Ssr2 (ENSNGAG00000002859) #17	Ubqln4 (ENSNGAG00000020831) #18	Lamtor2 (ENSNGAG00000020249) #19	Rab25 (ENSNGAG00000019999) #20	Mex3a (ENSNGAG00000019587) #21	Lmna (ENSNGAG00000017368) #22	Sema4a (ENSNGAG00000012750) #23	Slc25a44 (ENSNGAG00000010575) #25	Pmf1 (ENSNGAG00000007750) #26	ENSNGAG00000001625 #27	Paqr6 (ENSNGAG00000000673) #28	Smg5 (ENSNGAG00000020706) #29	Tmem79 (ENSNGAG00000020294) #30	Glmp (ENSNGAG00000019347) #31	Cct3 (ENSNGAG00000016875) #32	Rhbg (ENSNGAG00000019322)	Mef2d (ENSNGAG00000016036)	Iqgap3 (ENSNGAG00000020879)	Naxe (ENSNGAG00000020268)	ENSNGAG00000019958	Hapln2 (ENSNGAG00000019736)
Lesser Egyptian jerboa	MODERN SPECIES	141	Ash1l (ENSJJAG00000017942)	Dap3 (ENSJJAG00000010235)	Msto1 (ENSJJAG00000019140)	ENSJJAG00000013614	ENSJJAG00000010636 #12	Rit1 (ENSJJAG00000023411) #13	ENSJJAG00000020627 #14	Rxfp4 (ENSJJAG00000013686)	ENSJJAG00000017646 #16	ENSJJAG00000016067 #16	Ssr2 (ENSJJAG00000024209) #17	Ubqln4 (ENSJJAG00000002118) #18	ENSJJAG00000021135 #19	Rab25 (ENSJJAG00000021013) #20	Mex3a (ENSJJAG00000020484) #21	Lmna (ENSJJAG00000019904) #22	Sema4a (ENSJJAG00000016229) #23	Slc25a44 (ENSJJAG00000001462) #25	Pmf1 (ENSJJAG00000013470) #26	ENSJJAG00000000652 #27	Paqr6 (ENSJJAG00000001367) #28	Smg5 (ENSJJAG00000022763) #29	Tmem79 (ENSJJAG00000023610) #30	ENSJJAG00000019201	Cct3 (ENSJJAG00000013939) #32	ENSJJAG00000017067	Mef2d (ENSJJAG00000011790)	Iqgap3 (ENSJJAG00000000649)	ENSJJAG00000021021	Naxe (ENSJJAG00000023933)	Hapln2 (ENSJJAG00000016470)
Kangaroo rat	MODERN SPECIES	345	ENSDORG00000024404	ENSDORG00000025813	Ash1l (ENSDORG00000025575)	Dap3 (ENSDORG00000003596)	Msto1 (ENSDORG00000029541)	Gon4l (ENSDORG00000003598)	Syt11 (ENSDORG00000023709) #12	Rit1 (ENSDORG00000014601) #13	Khdc4 (ENSDORG00000014602) #14	Arhgef2 (ENSDORG00000012162) #16	ENSDORG00000010536 #17	Ubqln4 (ENSDORG00000010538) #18	Lamtor2 (ENSDORG00000002923) #19	Rab25 (ENSDORG00000002922) #20	Mex3a (ENSDORG00000002921) #21	Lmna (ENSDORG00000002470) #22	Sema4a (ENSDORG00000008821) #23
Rodentia_A	ANCESTRAL SPECIES		ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Sciuridae	ANCESTRAL SPECIES		ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132.e #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Marmotini	ANCESTRAL SPECIES	33	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132.e #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Marmotini_b	ANCESTRAL SPECIES	37	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132.e #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Squirrel	MODERN SPECIES	180	RUSC1 (ENSSTOG00000004516)	ASH1L (ENSSTOG00000019952)	DAP3 (ENSSTOG00000004627)	MSTO1 (ENSSTOG00000004655)	ENSSTOG00000004664	SYT11 (ENSSTOG00000004720) #12	RIT1 (ENSSTOG00000021028) #13	KHDC4 (ENSSTOG00000004732) #14	RXFP4 (ENSSTOG00000000616)	ARHGEF2 (ENSSTOG00000000620) #16	SSR2 (ENSSTOG00000028971) #17	UBQLN4 (ENSSTOG00000020043) #18	LAMTOR2 (ENSSTOG00000023389) #19	RAB25 (ENSSTOG00000000634) #20	MEX3A (ENSSTOG00000024275) #21	LMNA (ENSSTOG00000001758) #22	SEMA4A (ENSSTOG00000028050) #23	SLC25A44 (ENSSTOG00000001764) #25	PMF1 (ENSSTOG00000001768) #26	ENSSTOG00000034466	BGLAP (ENSSTOG00000027908) #27	PAQR6 (ENSSTOG00000001772) #28	SMG5 (ENSSTOG00000001780) #29	TMEM79 (ENSSTOG00000026140) #30	GLMP (ENSSTOG00000015763) #31	CCT3 (ENSSTOG00000001798) #32	TSACC (ENSSTOG00000001810) #33	RHBG (ENSSTOG00000028396)	MEF2D (ENSSTOG00000025590)	IQGAP3 (ENSSTOG00000016076)	ENSSTOG00000016083
Arctic ground squirrel	MODERN SPECIES	309	RUSC1 (ENSUPAG00010002787)	ASH1L (ENSUPAG00010002818)	ENSUPAG00010002886	MSTO1 (ENSUPAG00010002943)	ENSUPAG00010002975	SYT11 (ENSUPAG00010003045) #12	ENSUPAG00010003055 #13	KHDC4 (ENSUPAG00010003067) #14	ENSUPAG00010003101 #15	ARHGEF2 (ENSUPAG00010003114) #16	SSR2 (ENSUPAG00010003598) #17	UBQLN4 (ENSUPAG00010003613) #18	LAMTOR2 (ENSUPAG00010003634) #19	RAB25 (ENSUPAG00010003640) #20	MEX3A (ENSUPAG00010003653) #21	LMNA (ENSUPAG00010003669) #22	SEMA4A (ENSUPAG00010003712) #23	SLC25A44 (ENSUPAG00010004013) #25	PMF1 (ENSUPAG00010004034) #26	BGLAP (ENSUPAG00010004045) #27	ENSUPAG00010004061 #28	SMG5 (ENSUPAG00010004091) #29	TMEM79 (ENSUPAG00010004129) #30	GLMP (ENSUPAG00010004142) #31	CCT3 (ENSUPAG00010004189) #32	TSACC (ENSUPAG00010004234) #33	RHBG (ENSUPAG00010004243)	MEF2D (ENSUPAG00010004263)	IQGAP3 (ENSUPAG00010004467)	ENSUPAG00010004535	NAXE (ENSUPAG00010004540)
Alpin marmot	MODERN SPECIES	85	ENSMMMG00000014387	ASH1L (ENSMMMG00000014324)	DAP3 (ENSMMMG00000014245)	MSTO1 (ENSMMMG00000014213)	ENSMMMG00000014163	SYT11 (ENSMMMG00000014151) #12	ENSMMMG00000014145 #13	KHDC4 (ENSMMMG00000014104) #14	RXFP4 (ENSMMMG00000014101)	ARHGEF2 (ENSMMMG00000013899) #16	SSR2 (ENSMMMG00000013889) #17	UBQLN4 (ENSMMMG00000013874) #18	LAMTOR2 (ENSMMMG00000013864) #19	RAB25 (ENSMMMG00000013857) #20	MEX3A (ENSMMMG00000013855) #21	LMNA (ENSMMMG00000013831) #22	SEMA4A (ENSMMMG00000013785) #23	SLC25A44 (ENSMMMG00000013773) #25	ENSMMMG00000013758	BGLAP (ENSMMMG00000013734) #27	PAQR6 (ENSMMMG00000013724) #28	SMG5 (ENSMMMG00000013706) #29	TMEM79 (ENSMMMG00000013693) #30	GLMP (ENSMMMG00000013644) #31	CCT3 (ENSMMMG00000013571) #32	TSACC (ENSMMMG00000013564) #33	RHBG (ENSMMMG00000013553)	ENSMMMG00000013541	IQGAP3 (ENSMMMG00000013468)	ENSMMMG00000013455	NAXE (ENSMMMG00000013443)
Eurasian red squirrel	MODERN SPECIES		FDPS (ENSSVLG00005000103)	RUSC1 (ENSSVLG00005000107)	ENSSVLG00005000118	MSTO1 (ENSSVLG00005000136)	ENSSVLG00005000147	ENSSVLG00005000171 #12	ENSSVLG00005000188 #13	KHDC4 (ENSSVLG00005000224) #14	RXFP4 (ENSSVLG00005000258)	ARHGEF2 (ENSSVLG00005000357) #16	SSR2 (ENSSVLG00005000552) #17	UBQLN4 (ENSSVLG00005000591) #18	LAMTOR2 (ENSSVLG00005000628) #19	RAB25 (ENSSVLG00005000653) #20	MEX3A (ENSSVLG00005000673) #21	LMNA (ENSSVLG00005000714) #22	SEMA4A (ENSSVLG00005000802) #23	SLC25A44 (ENSSVLG00005000872) #25	PMF1 (ENSSVLG00005000891) #26	BGLAP (ENSSVLG00005000913) #27	PAQR6 (ENSSVLG00005000936) #28	SMG5 (ENSSVLG00005000972) #29	ENSSVLG00005000998	GLMP (ENSSVLG00005001024) #31	CCT3 (ENSSVLG00005001076) #32	TSACC (ENSSVLG00005001124) #33	RHBG (ENSSVLG00005001146)	MEF2D (ENSSVLG00005001227)	IQGAP3 (ENSSVLG00005001534)	TTC24 (ENSSVLG00005002076)	ENSSVLG00005002106
Hystricomorpha	ANCESTRAL SPECIES	45	ENSGT00900000141074	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224.z.a #32	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a	ENSGT00960000190501
Naked mole-rat female	MODERN SPECIES	10	ENSHGLG00000006300	ENSHGLG00000049863	ASH1L (ENSHGLG00000008090)	DAP3 (ENSHGLG00000013978)	MSTO1 (ENSHGLG00000018369)	ENSHGLG00000006556	SYT11 (ENSHGLG00000032288) #12	ENSHGLG00000034706 #13	KHDC4 (ENSHGLG00000010495) #14	RXFP4 (ENSHGLG00000037004)	SSR2 (ENSHGLG00000035940) #17	UBQLN4 (ENSHGLG00000003684) #18	LAMTOR2 (ENSHGLG00000036352) #19	RAB25 (ENSHGLG00000005517) #20	MEX3A (ENSHGLG00000041429) #21	ENSHGLG00000036594 #22	SEMA4A (ENSHGLG00000003587) #23	SLC25A44 (ENSHGLG00000042222) #25	ENSHGLG00000007944 #27	PAQR6 (ENSHGLG00000015640) #28	SMG5 (ENSHGLG00000019152) #29	TMEM79 (ENSHGLG00000018185) #30	GLMP (ENSHGLG00000041332) #31	ENSHGLG00000003153 #32	RHBG (ENSHGLG00000005998)	MEF2D (ENSHGLG00000019055)	IQGAP3 (ENSHGLG00000018362)	NAXE (ENSHGLG00000007354)	ENSHGLG00000041268	ENSHGLG00000011346	HAPLN2 (ENSHGLG00000003467)
Hystricomorpha_a	ANCESTRAL SPECIES	54	ENSGT00900000141074	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224.y #32	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a	ENSGT00390000008765
Hystricomorpha_b	ANCESTRAL SPECIES	61	ENSGT00900000141074	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224.z.a #32	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a	ENSGT00390000008765
Degu	MODERN SPECIES	73	ASH1L (ENSODEG00000009920)	DAP3 (ENSODEG00000010674)	MSTO1 (ENSODEG00000011191)	ENSODEG00000010737	ENSODEG00000011008	SYT11 (ENSODEG00000010870) #12	RIT1 (ENSODEG00000010128) #13	ENSODEG00000009528 #14	ENSODEG00000019992 #15	ARHGEF2 (ENSODEG00000011373) #16	SSR2 (ENSODEG00000010659) #17	UBQLN4 (ENSODEG00000010901) #18	LAMTOR2 (ENSODEG00000010141) #19	RAB25 (ENSODEG00000009908) #20	MEX3A (ENSODEG00000009643) #21	LMNA (ENSODEG00000009369) #22	SEMA4A (ENSODEG00000009359) #23	SLC25A44 (ENSODEG00000009774) #25	PMF1 (ENSODEG00000011902) #26	BGLAP (ENSODEG00000010926) #27	PAQR6 (ENSODEG00000010747) #28	SMG5 (ENSODEG00000012237) #29	TMEM79 (ENSODEG00000012508) #30	GLMP (ENSODEG00000009800) #31	ENSODEG00000009974 #32	RHBG (ENSODEG00000009136)	MEF2D (ENSODEG00000010190)	IQGAP3 (ENSODEG00000010076)	ENSODEG00000009606	ENSODEG00000010121	ENSODEG00000010437
Long-tailed chinchilla	MODERN SPECIES	252	FDPS (ENSCLAG00000005410)	RUSC1 (ENSCLAG00000005579)	ASH1L (ENSCLAG00000004536)	DAP3 (ENSCLAG00000005599)	MSTO1 (ENSCLAG00000006273)	ENSCLAG00000006556	SYT11 (ENSCLAG00000013172) #12	RIT1 (ENSCLAG00000013305) #13	KHDC4 (ENSCLAG00000010544) #14	ARHGEF2 (ENSCLAG00000013596) #16	SSR2 (ENSCLAG00000003363) #17	UBQLN4 (ENSCLAG00000003519) #18	LAMTOR2 (ENSCLAG00000003700) #19	RAB25 (ENSCLAG00000003784) #20	MEX3A (ENSCLAG00000003842) #21	LMNA (ENSCLAG00000003894) #22	SEMA4A (ENSCLAG00000005297) #23	SLC25A44 (ENSCLAG00000005587) #25	PMF1 (ENSCLAG00000003672) #26	BGLAP (ENSCLAG00000003710) #27	PAQR6 (ENSCLAG00000003899) #28	SMG5 (ENSCLAG00000003983) #29	TMEM79 (ENSCLAG00000004142) #30	GLMP (ENSCLAG00000004192) #31	ENSCLAG00000004359 #32	RHBG (ENSCLAG00000004625)	MEF2D (ENSCLAG00000004702)	IQGAP3 (ENSCLAG00000004927)	ENSCLAG00000002793	NAXE (ENSCLAG00000002832)	ENSCLAG00000002967
Guinea pig	MODERN SPECIES	10	RUSC1 (ENSCPOG00000032934)	ASH1L (ENSCPOG00000004801)	DAP3 (ENSCPOG00000030924)	MSTO1 (ENSCPOG00000004857)	ENSCPOG00000004859	SYT11 (ENSCPOG00000004866) #12	RIT1 (ENSCPOG00000004868) #13	KHDC4 (ENSCPOG00000004870) #14	ENSCPOG00000032356	ARHGEF2 (ENSCPOG00000025396) #16	SSR2 (ENSCPOG00000023729) #17	UBQLN4 (ENSCPOG00000002467) #18	LAMTOR2 (ENSCPOG00000032238) #19	RAB25 (ENSCPOG00000002472) #20	MEX3A (ENSCPOG00000020219) #21	LMNA (ENSCPOG00000023214) #22	SEMA4A (ENSCPOG00000015694) #23	SLC25A44 (ENSCPOG00000021129) #25	PMF1 (ENSCPOG00000015695) #26	BGLAP (ENSCPOG00000040505) #27	PAQR6 (ENSCPOG00000019726) #28	SMG5 (ENSCPOG00000015696) #29	TMEM79 (ENSCPOG00000033881) #30	GLMP (ENSCPOG00000032634) #31	CCT3 (ENSCPOG00000009131) #32	RHBG (ENSCPOG00000011135)	MEF2D (ENSCPOG00000036656)	IQGAP3 (ENSCPOG00000005361)	ENSCPOG00000012272	NAXE (ENSCPOG00000024878)	ENSCPOG00000013701
Lagomorpha	ANCESTRAL SPECIES	1	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01090000260051.b.b #15	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Pika	MODERN SPECIES	3341										ARHGEF2 (ENSOPRG00000002782) #16	SSR2 (ENSOPRG00000002830) #17	UBQLN4 (ENSOPRG00000002851) #18	LAMTOR2 (ENSOPRG00000002877) #19	RAB25 (ENSOPRG00000002894) #20	MEX3A (ENSOPRG00000002937) #21	LMNA (ENSOPRG00000002966) #22	SEMA4A (ENSOPRG00000002992) #23	SLC25A44 (ENSOPRG00000003022) #25
Rabbit	MODERN SPECIES	4	ENSOCUG00000034353	DAP3 (ENSOCUG00000004785)	MSTO1 (ENSOCUG00000010186)	ENSOCUG00000010191	ENSOCUG00000026145	SYT11 (ENSOCUG00000027971) #12	RIT1 (ENSOCUG00000006377) #13	KHDC4 (ENSOCUG00000010430) #14	ENSOCUG00000026819 #15	ARHGEF2 (ENSOCUG00000001937) #16	SSR2 (ENSOCUG00000008455) #17	UBQLN4 (ENSOCUG00000007156) #18	LAMTOR2 (ENSOCUG00000027994) #19	RAB25 (ENSOCUG00000005634) #20	ENSOCUG00000005640 #21	LMNA (ENSOCUG00000010011) #22	SEMA4A (ENSOCUG00000001326) #23	SLC25A44 (ENSOCUG00000012861) #25	PMF1 (ENSOCUG00000012870) #26	BGLAP (ENSOCUG00000025958) #27	SMG5 (ENSOCUG00000012886) #29	ENSOCUG00000012899 #30	GLMP (ENSOCUG00000026609) #31	CCT3 (ENSOCUG00000000137) #32	TSACC (ENSOCUG00000029754) #33	RHBG (ENSOCUG00000016130)	MEF2D (ENSOCUG00000012173)	TTC24 (ENSOCUG00000023015)	IQGAP3 (ENSOCUG00000012177)	NAXE (ENSOCUG00000016208)	GPATCH4 (ENSOCUG00000025781)
Tree shrew	MODERN SPECIES	3906										RXFP4 (ENSTBEG00000001002)	ARHGEF2 (ENSTBEG00000001641) #16	SSR2 (ENSTBEG00000002867) #17	UBQLN4 (ENSTBEG00000003066) #18	LAMTOR2 (ENSTBEG00000003768) #19	RAB25 (ENSTBEG00000004142) #20	LMNA (ENSTBEG00000005069) #22
Primates	ANCESTRAL SPECIES	7	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Haplorrhini	ANCESTRAL SPECIES	7	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Simiiformes	ANCESTRAL SPECIES	8	ENSGT00940000156698	ENSGT00390000016256.l	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256.k	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT01010000224083	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00390000005493	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b
Catarrhini	ANCESTRAL SPECIES	10	ENSGT00940000156698	ENSGT00390000016256.l.b	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256.k	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT01010000224083	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00390000005493	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b
Hominoidea	ANCESTRAL SPECIES	7	ENSGT00940000156698	ENSGT00390000016256.l.b	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256.k	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT01010000224083	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00390000005493	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b
Hominidae	ANCESTRAL SPECIES	6	ENSGT00940000156698	ENSGT00390000016256.l.b	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256.k	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT01010000224083	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00390000005493	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	6	ENSGT00390000016256.l.b	ENSGT00390000015248	ENSGT00530000064067.c.b	ENSGT00530000064067.c.a	ENSGT00390000016256.k	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT01010000224083	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00390000005493	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b
Homo/Pan group	ANCESTRAL SPECIES	7	ENSGT00530000064067.d	ENSGT00390000016256.l.b	ENSGT00390000015248	ENSGT00530000064067.c.a	ENSGT00390000016256.k	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT01010000224083	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00390000005493	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b
Pan	ANCESTRAL SPECIES		ENSGT00940000156698	ENSGT00390000016256.l.b	ENSGT00390000015248	ENSGT00530000064067.c.a	ENSGT00390000016256.k	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT01010000224083	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00390000005493	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b
Chimpanzee	MODERN SPECIES		CLDN6 (ENSPTRG00000045058)	YY1AP1 (ENSPTRG00000001429)	DAP3 (ENSPTRG00000001430)	MSTO1 (ENSPTRG00000001428)	GON4L (ENSPTRG00000001433)	SYT11 (ENSPTRG00000001436) #12	RIT1 (ENSPTRG00000001437) #13	KHDC4 (ENSPTRG00000001438) #14	RXFP4 (ENSPTRG00000001439)	ARHGEF2 (ENSPTRG00000001441) #16	SSR2 (ENSPTRG00000001442) #17	UBQLN4 (ENSPTRG00000001444) #18	LAMTOR2 (ENSPTRG00000001445) #19	RAB25 (ENSPTRG00000001446) #20	MEX3A (ENSPTRG00000030373) #21	LMNA (ENSPTRG00000001447) #22	SEMA4A (ENSPTRG00000001448) #23	SLC25A44 (ENSPTRG00000001449) #25	PMF1 (ENSPTRG00000001450) #26	BGLAP (ENSPTRG00000041553) #27	PAQR6 (ENSPTRG00000001451) #28	SMG5 (ENSPTRG00000023925) #29	TMEM79 (ENSPTRG00000001453) #30	GLMP (ENSPTRG00000001455) #31	CCT3 (ENSPTRG00000001456) #32	TSACC (ENSPTRG00000001457)	RHBG (ENSPTRG00000001458)	ENSPTRG00000001459	MEF2D (ENSPTRG00000001460)	IQGAP3 (ENSPTRG00000001461)	TTC24 (ENSPTRG00000001462)
Bonobo	MODERN SPECIES		YY1AP1 (ENSPPAG00000041804)	DAP3 (ENSPPAG00000030901)	ENSPPAG00000035270	ENSPPAG00000028555	GON4L (ENSPPAG00000030169)	SYT11 (ENSPPAG00000039359) #12	RIT1 (ENSPPAG00000043026) #13	KHDC4 (ENSPPAG00000028145) #14	RXFP4 (ENSPPAG00000011483)	ARHGEF2 (ENSPPAG00000043187) #16	ENSPPAG00000036187 #17	UBQLN4 (ENSPPAG00000040262) #18	LAMTOR2 (ENSPPAG00000037502) #19	RAB25 (ENSPPAG00000031127) #20	MEX3A (ENSPPAG00000016303) #21	LMNA (ENSPPAG00000037857) #22	SEMA4A (ENSPPAG00000043828) #23	SLC25A44 (ENSPPAG00000027895) #25	ENSPPAG00000034289	BGLAP (ENSPPAG00000042608) #27	ENSPPAG00000027236 #28	SMG5 (ENSPPAG00000011996) #29	TMEM79 (ENSPPAG00000042037) #30	GLMP (ENSPPAG00000028749) #31	CCT3 (ENSPPAG00000042161) #32	TSACC (ENSPPAG00000040738) #33	RHBG (ENSPPAG00000032922)	ENSPPAG00000028566	MEF2D (ENSPPAG00000038584)	IQGAP3 (ENSPPAG00000040557)	TTC24 (ENSPPAG00000031347)
Human	MODERN SPECIES		ASH1L (ENSG00000116539)	MSTO1 (ENSG00000125459)	YY1AP1 (ENSG00000163374)	DAP3 (ENSG00000132676)	GON4L (ENSG00000116580)	SYT11 (ENSG00000132718) #12	RIT1 (ENSG00000143622) #13	KHDC4 (ENSG00000132680) #14	RXFP4 (ENSG00000173080)	ARHGEF2 (ENSG00000116584) #16	SSR2 (ENSG00000163479) #17	UBQLN4 (ENSG00000160803) #18	LAMTOR2 (ENSG00000116586) #19	RAB25 (ENSG00000132698) #20	MEX3A (ENSG00000254726) #21	LMNA (ENSG00000160789) #22	SEMA4A (ENSG00000196189) #23	SLC25A44 (ENSG00000160785) #25	PMF1-BGLAP (ENSG00000260238)	PMF1 (ENSG00000160783) #26	BGLAP (ENSG00000242252) #27	PAQR6 (ENSG00000160781) #28	SMG5 (ENSG00000198952) #29	TMEM79 (ENSG00000163472) #30	GLMP (ENSG00000198715) #31	VHLL (ENSG00000189030)	CCT3 (ENSG00000163468) #32	TSACC (ENSG00000163467) #33	RHBG (ENSG00000132677)	MEF2D (ENSG00000116604)	IQGAP3 (ENSG00000183856)
Gorilla	MODERN SPECIES		YY1AP1 (ENSGGOG00000026024)	DAP3 (ENSGGOG00000007618)	ENSGGOG00000040593	GON4L (ENSGGOG00000000477)	ENSGGOG00000025183	SYT11 (ENSGGOG00000010111) #12	RIT1 (ENSGGOG00000001461) #13	KHDC4 (ENSGGOG00000024568) #14	RXFP4 (ENSGGOG00000034869)	ARHGEF2 (ENSGGOG00000005907) #16	SSR2 (ENSGGOG00000024769) #17	ENSGGOG00000008916 #18	LAMTOR2 (ENSGGOG00000006818) #19	RAB25 (ENSGGOG00000006821) #20	MEX3A (ENSGGOG00000004513) #21	LMNA (ENSGGOG00000000813) #22	SEMA4A (ENSGGOG00000000814) #23	SLC25A44 (ENSGGOG00000010910) #25	PMF1 (ENSGGOG00000037793) #26	BGLAP (ENSGGOG00000010916) #27	ENSGGOG00000010923 #28	SMG5 (ENSGGOG00000010932) #29	TMEM79 (ENSGGOG00000014240) #30	GLMP (ENSGGOG00000014243) #31	CCT3 (ENSGGOG00000023333) #32	TSACC (ENSGGOG00000008582) #33	RHBG (ENSGGOG00000007638)	ENSGGOG00000034972	MEF2D (ENSGGOG00000008534)	IQGAP3 (ENSGGOG00000002548)	TTC24 (ENSGGOG00000012558)
Orangutan	MODERN SPECIES		YY1AP1 (ENSPPYG00000000743)	DAP3 (ENSPPYG00000000742)	MSTO1 (ENSPPYG00000000740)	MSTO2P (ENSPPYG00000010648)	GON4L (ENSPPYG00000000739)	SYT11 (ENSPPYG00000039531) #12	RIT1 (ENSPPYG00000000737) #13	KHDC4 (ENSPPYG00000000736) #14	RXFP4 (ENSPPYG00000000735)	ARHGEF2 (ENSPPYG00000000734) #16	SSR2 (ENSPPYG00000000733) #17	UBQLN4 (ENSPPYG00000000732) #18	LAMTOR2 (ENSPPYG00000000731) #19	RAB25 (ENSPPYG00000000730) #20	MEX3A (ENSPPYG00000000729) #21	LMNA (ENSPPYG00000000728) #22	SEMA4A (ENSPPYG00000000727) #23	SLC25A44 (ENSPPYG00000000726) #25	ENSPPYG00000000725	PAQR6 (ENSPPYG00000000724) #28	SMG5 (ENSPPYG00000000723) #29	TMEM79 (ENSPPYG00000000722) #30	GLMP (ENSPPYG00000000721) #31	CCT3 (ENSPPYG00000010639) #32	ENSPPYG00000031428 #33	RHBG (ENSPPYG00000000718)	ENSPPYG00000000717	MEF2D (ENSPPYG00000000716)	IQGAP3 (ENSPPYG00000000715)	TTC24 (ENSPPYG00000000714)	NAXE (ENSPPYG00000000713)
Gibbon	MODERN SPECIES	2	ASH1L (ENSNLEG00000012163)	ENSNLEG00000012222	YY1AP1 (ENSNLEG00000012206)	DAP3 (ENSNLEG00000012211)	ENSNLEG00000031265	GON4L (ENSNLEG00000035449)	SYT11 (ENSNLEG00000012224) #12	RIT1 (ENSNLEG00000012228) #13	KHDC4 (ENSNLEG00000012238) #14	ENSNLEG00000012262	ARHGEF2 (ENSNLEG00000012264) #16	SSR2 (ENSNLEG00000032588) #17	LAMTOR2 (ENSNLEG00000035591) #19	RAB25 (ENSNLEG00000012323) #20	MEX3A (ENSNLEG00000012329) #21	LMNA (ENSNLEG00000012331) #22	SEMA4A (ENSNLEG00000012367) #23	ENSNLEG00000012408 #25	ENSNLEG00000033074 #26	BGLAP (ENSNLEG00000012409) #27	ENSNLEG00000012423 #28	SMG5 (ENSNLEG00000012439) #29	TMEM79 (ENSNLEG00000012481) #30	GLMP (ENSNLEG00000032477) #31	CCT3 (ENSNLEG00000012509) #32	TSACC (ENSNLEG00000012582) #33	RHBG (ENSNLEG00000012589)	ENSNLEG00000012606	ENSNLEG00000028307	ENSNLEG00000012625	TTC24 (ENSNLEG00000012653)
Cercopithecidae	ANCESTRAL SPECIES	22	ENSGT00940000156698	ENSGT00390000016256.l.b	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256.k	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00390000002944.e.a.a.a.a	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT01010000224083	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00390000005493	ENSGT00940000159463
Cercopithecinae	ANCESTRAL SPECIES		ENSGT00940000156698	ENSGT00390000016256.l.b	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256.k	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00390000002944.e.a.a.a.a	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT01010000224083	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00390000005493	ENSGT00940000159463
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00530000064067.h	ENSGT00390000016256.l.b	ENSGT00390000015248	ENSGT00530000064067.g.a	ENSGT00390000016256.k	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00390000002944.e.a.a.a.a	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT01010000224083	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00390000005493	ENSGT00940000159463
Macaca	ANCESTRAL SPECIES		ENSGT00390000016256.l.a.a	ENSGT00390000016256.l.b	ENSGT00390000015248	ENSGT00530000064067.g.a	ENSGT00390000016256.k	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00390000002944.e.a.a.a.a	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00990000210932	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b
Pig-tailed macaque	MODERN SPECIES	262	ASH1L (ENSMNEG00000004882)	MSTO1 (ENSMNEG00000030351)	YY1AP1 (ENSMNEG00000038421)	DAP3 (ENSMNEG00000043408)	GON4L (ENSMNEG00000022837)	SYT11 (ENSMNEG00000039442) #12	RIT1 (ENSMNEG00000039545) #13	KHDC4 (ENSMNEG00000005131) #14	RXFP4 (ENSMNEG00000025991)	ARHGEF2 (ENSMNEG00000030024) #16	ENSMNEG00000036868 #17	UBQLN4 (ENSMNEG00000028661) #18	LAMTOR2 (ENSMNEG00000044990) #19	RAB25 (ENSMNEG00000004251) #20	MEX3A (ENSMNEG00000031569) #21	LMNA (ENSMNEG00000045506) #22	SEMA4A (ENSMNEG00000027619) #23	ENSMNEG00000041520	SLC25A44 (ENSMNEG00000032439) #25	PMF1 (ENSMNEG00000030198) #26	BGLAP (ENSMNEG00000014728) #27	ENSMNEG00000037204 #28	SMG5 (ENSMNEG00000044425) #29	TMEM79 (ENSMNEG00000040540) #30	GLMP (ENSMNEG00000034996) #31	CCT3 (ENSMNEG00000027103) #32	TSACC (ENSMNEG00000030389) #33	RHBG (ENSMNEG00000032887)	ENSMNEG00000043633	MEF2D (ENSMNEG00000029442)	IQGAP3 (ENSMNEG00000043986)
Macaca_a	ANCESTRAL SPECIES		ENSGT00390000016256.l.a.a	ENSGT00390000016256.l.b	ENSGT00390000015248	ENSGT00530000064067.g.b	ENSGT00530000064067.g.a	ENSGT00390000016256.k	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000005131 #31	ENSGT00390000002390.b #30	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00990000210932	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346
Rhesus	MODERN SPECIES		ENSMMUG00000009981	ASH1L (ENSMMUG00000023146)	DAP3 (ENSMMUG00000018080)	ENSMMUG00000062397	GON4L (ENSMMUG00000009987)	SYT11 (ENSMMUG00000021312) #12	RIT1 (ENSMMUG00000053454) #13	KHDC4 (ENSMMUG00000004648) #14	RXFP4 (ENSMMUG00000005090) #15	ARHGEF2 (ENSMMUG00000005092) #16	SSR2 (ENSMMUG00000013495) #17	UBQLN4 (ENSMMUG00000009983) #18	LAMTOR2 (ENSMMUG00000012126) #19	RAB25 (ENSMMUG00000022306) #20	MEX3A (ENSMMUG00000052160) #21	LMNA (ENSMMUG00000016096) #22	ENSMMUG00000037731	SEMA4A (ENSMMUG00000004901) #23	BGLAP (ENSMMUG00000004902) #25	PAQR6 (ENSMMUG00000000085) #28	SMG5 (ENSMMUG00000000090) #29	TMEM79 (ENSMMUG00000047929) #30	GLMP (ENSMMUG00000000092) #31	VHLL (ENSMMUG00000064443)	CCT3 (ENSMMUG00000019034) #32	TSACC (ENSMMUG00000051030) #33	RHBG (ENSMMUG00000017965)	ENSMMUG00000017966	ENSMMUG00000057120	MEF2D (ENSMMUG00000016696)	IQGAP3 (ENSMMUG00000002621)
Crab-eating macaque	MODERN SPECIES		ENSMFAG00000050889	ENSMFAG00000044446	ENSMFAG00000056171	DAP3 (ENSMFAG00000031112)	MSTO1 (ENSMFAG00000031664)	GON4L (ENSMFAG00000035960)	SYT11 (ENSMFAG00000039413) #12	RIT1 (ENSMFAG00000054543) #13	KHDC4 (ENSMFAG00000003201) #14	ENSMFAG00000029955 #15	ARHGEF2 (ENSMFAG00000034906) #16	SSR2 (ENSMFAG00000040060) #17	LAMTOR2 (ENSMFAG00000018166) #19	RAB25 (ENSMFAG00000000115) #20	MEX3A (ENSMFAG00000000628) #21	LMNA (ENSMFAG00000045463) #22	ENSMFAG00000054546	SEMA4A (ENSMFAG00000037487) #23	SLC25A44 (ENSMFAG00000003800) #25	PMF1 (ENSMFAG00000031299) #26	BGLAP (ENSMFAG00000056045) #27	ENSMFAG00000043399 #28	TMEM79 (ENSMFAG00000002046) #30	SMG5 (ENSMFAG00000045357) #29	CCT3 (ENSMFAG00000033146) #32	TSACC (ENSMFAG00000036557) #33	RHBG (ENSMFAG00000040010)	ENSMFAG00000005400	MEF2D (ENSMFAG00000030808)	IQGAP3 (ENSMFAG00000035349)	TTC24 (ENSMFAG00000036161)
Cercopithecinae_b	ANCESTRAL SPECIES	3	ENSGT00530000064067.h	ENSGT00390000016256.l.b	ENSGT00390000015248	ENSGT00530000064067.g.a	ENSGT00390000016256.k	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00390000002944.e.a.a.a.a	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT01010000224083	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00390000005493	ENSGT00940000159463
Olive baboon	MODERN SPECIES		ASH1L (ENSPANG00000004959)	MSTO1 (ENSPANG00000006654)	YY1AP1 (ENSPANG00000029721)	DAP3 (ENSPANG00000001758)	GON4L (ENSPANG00000011456)	SYT11 (ENSPANG00000018152) #12	RIT1 (ENSPANG00000035332) #13	KHDC4 (ENSPANG00000011455) #14	ENSPANG00000004167 #15	ARHGEF2 (ENSPANG00000006851) #16	SSR2 (ENSPANG00000005571) #17	UBQLN4 (ENSPANG00000001757) #18	LAMTOR2 (ENSPANG00000032414) #19	RAB25 (ENSPANG00000003113) #20	MEX3A (ENSPANG00000020303) #21	LMNA (ENSPANG00000003882) #22	SEMA4A (ENSPANG00000016075) #23	ENSPANG00000041668	SLC25A44 (ENSPANG00000008735) #25	PMF1 (ENSPANG00000010692) #26	BGLAP (ENSPANG00000023523) #27	PAQR6 (ENSPANG00000008734) #28	SMG5 (ENSPANG00000011201) #29	TMEM79 (ENSPANG00000011454) #30	GLMP (ENSPANG00000018021) #31	ENSPANG00000003881	CCT3 (ENSPANG00000026114) #32	TSACC (ENSPANG00000019713) #33	RHBG (ENSPANG00000015205)	ENSPANG00000024517	MEF2D (ENSPANG00000014079)
Cercopithecinae_d	ANCESTRAL SPECIES	33		ENSGT00390000016256.l.b	ENSGT00390000015248	ENSGT00530000064067.g.a	ENSGT00390000016256.k	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00390000002944.e.a.a.a.a	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT01010000224083	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00990000210932	ENSGT00940000159463
Drill	MODERN SPECIES	1097					GON4L (ENSMLEG00000039636)	SYT11 (ENSMLEG00000034240) #12	RIT1 (ENSMLEG00000030499) #13	KHDC4 (ENSMLEG00000036924) #14	RXFP4 (ENSMLEG00000000539)	ARHGEF2 (ENSMLEG00000038613) #16	SSR2 (ENSMLEG00000038454) #17	UBQLN4 (ENSMLEG00000036998) #18	LAMTOR2 (ENSMLEG00000020600) #19	RAB25 (ENSMLEG00000025037) #20	MEX3A (ENSMLEG00000023495) #21	LMNA (ENSMLEG00000030821) #22	SEMA4A (ENSMLEG00000033397) #23	ENSMLEG00000037790	SLC25A44 (ENSMLEG00000019841) #25	PMF1 (ENSMLEG00000032681) #26	BGLAP (ENSMLEG00000039620) #27	PAQR6 (ENSMLEG00000038853) #28	SMG5 (ENSMLEG00000041192) #29	TMEM79 (ENSMLEG00000038027) #30	GLMP (ENSMLEG00000038171) #31	ENSMLEG00000043471	CCT3 (ENSMLEG00000036583) #32	TSACC (ENSMLEG00000015946) #33	RHBG (ENSMLEG00000039112)	ENSMLEG00000042439	MEF2D (ENSMLEG00000043192)
Sooty mangabey	MODERN SPECIES	226		YY1AP1 (ENSCATG00000042138)	DAP3 (ENSCATG00000037832)	MSTO1 (ENSCATG00000041352)	GON4L (ENSCATG00000031497)	SYT11 (ENSCATG00000038729) #12	RIT1 (ENSCATG00000045033) #13	KHDC4 (ENSCATG00000034662) #14	RXFP4 (ENSCATG00000019172)	ARHGEF2 (ENSCATG00000029542) #16	SSR2 (ENSCATG00000030169) #17	UBQLN4 (ENSCATG00000023959) #18	LAMTOR2 (ENSCATG00000030341) #19	RAB25 (ENSCATG00000029662) #20	MEX3A (ENSCATG00000032390) #21	LMNA (ENSCATG00000033574) #22	SEMA4A (ENSCATG00000036260) #23	ENSCATG00000042076	SLC25A44 (ENSCATG00000039803) #25	PMF1 (ENSCATG00000029246) #26	BGLAP (ENSCATG00000014375) #27	PAQR6 (ENSCATG00000029286) #28	SMG5 (ENSCATG00000030539) #29	TMEM79 (ENSCATG00000041384) #30	GLMP (ENSCATG00000032524) #31	CCT3 (ENSCATG00000032970) #32	TSACC (ENSCATG00000032103) #33	RHBG (ENSCATG00000028238)	ENSCATG00000040742	MEF2D (ENSCATG00000043926)	IQGAP3 (ENSCATG00000007614)
Vervet Monkey	MODERN SPECIES	12	ASH1L (ENSCSAG00000002027)	YY1AP1 (ENSCSAG00000002031)	DAP3 (ENSCSAG00000002035)	ENSCSAG00000002038	GON4L (ENSCSAG00000002060)	SYT11 (ENSCSAG00000002072) #12	RIT1 (ENSCSAG00000002074) #13	KHDC4 (ENSCSAG00000002082) #14	ENSCSAG00000000059 #15	ARHGEF2 (ENSCSAG00000002088) #16	SSR2 (ENSCSAG00000002090) #17	UBQLN4 (ENSCSAG00000002093) #18	LAMTOR2 (ENSCSAG00000002094) #19	RAB25 (ENSCSAG00000002096) #20	MEX3A (ENSCSAG00000002097) #21	LMNA (ENSCSAG00000002099) #22	SEMA4A (ENSCSAG00000002102) #23	SLC25A44 (ENSCSAG00000002104) #25	PMF1 (ENSCSAG00000002107) #26	BGLAP (ENSCSAG00000002112) #27	PAQR6 (ENSCSAG00000002117) #28	SMG5 (ENSCSAG00000002120) #29	TMEM79 (ENSCSAG00000002125) #30	GLMP (ENSCSAG00000002123) #31	CCT3 (ENSCSAG00000002128) #32	TSACC (ENSCSAG00000002131) #33	RHBG (ENSCSAG00000002135)	MEF2D (ENSCSAG00000002143)	IQGAP3 (ENSCSAG00000002151)	TTC24 (ENSCSAG00000002156)	NAXE (ENSCSAG00000002158)
Rhinopithecus	ANCESTRAL SPECIES	59		ENSGT00390000016256.l.a.a	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256.k	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00390000002944.e.a.a.a.a	ENSGT00940000155399 #25	ENSGT00940000164230	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b.c #30	ENSGT00390000005131 #31	ENSGT01010000224083	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00390000005493	ENSGT00940000159463
Golden snub-nosed monkey	MODERN SPECIES	1290												ENSRROG00000027233 #18	LAMTOR2 (ENSRROG00000045270) #19	RAB25 (ENSRROG00000028851) #20	MEX3A (ENSRROG00000029193) #21	LMNA (ENSRROG00000037915) #22	SEMA4A (ENSRROG00000043198) #23	ENSRROG00000044575	SLC25A44 (ENSRROG00000030201) #25	ENSRROG00000038103	PAQR6 (ENSRROG00000042038) #28	SMG5 (ENSRROG00000030035) #29	ENSRROG00000041912 #30
Black snub-nosed monkey	MODERN SPECIES	1571						DCDC2C (ENSRBIG00000042681)	ALLC (ENSRBIG00000032207)	KHDC4 (ENSRBIG00000013231) #14	RXFP4 (ENSRBIG00000032808)	ARHGEF2 (ENSRBIG00000035589) #16	SSR2 (ENSRBIG00000039430) #17	UBQLN4 (ENSRBIG00000033879) #18	LAMTOR2 (ENSRBIG00000043324) #19	RAB25 (ENSRBIG00000044154) #20	MEX3A (ENSRBIG00000033197) #21	LMNA (ENSRBIG00000041859) #22	SEMA4A (ENSRBIG00000037159) #23	ENSRBIG00000026928	SLC25A44 (ENSRBIG00000041041) #25	ENSRBIG00000036011	BGLAP (ENSRBIG00000000752) #27	ENSRBIG00000027798 #28	SMG5 (ENSRBIG00000027428) #29	ENSRBIG00000032628 #30	GLMP (ENSRBIG00000030275) #31	CCT3 (ENSRBIG00000032821) #32	TSACC (ENSRBIG00000036225) #33	RHBG (ENSRBIG00000029171)	ENSRBIG00000033686	MEF2D (ENSRBIG00000038018)	IQGAP3 (ENSRBIG00000036001)
Platyrrhini	ANCESTRAL SPECIES	12	ENSGT00940000156698	ENSGT00390000016256.l	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256.k	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT01010000224083	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00390000005493	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b
Cebidae	ANCESTRAL SPECIES	12	ENSGT00940000156698	ENSGT00390000016256.l	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256.k	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT01010000224083	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00390000005493	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b
Cebidae_a	ANCESTRAL SPECIES	6	ENSGT00940000156698	ENSGT00390000016256.l	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256.k	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT01010000224083	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00390000005493	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b
Capuchin	MODERN SPECIES	427		YY1AP1 (ENSCCAG00000026983)	DAP3 (ENSCCAG00000033532)	MSTO1 (ENSCCAG00000035498)	GON4L (ENSCCAG00000037108)	SYT11 (ENSCCAG00000016634) #12	RIT1 (ENSCCAG00000037656) #13	KHDC4 (ENSCCAG00000023017) #14	ARHGEF2 (ENSCCAG00000029636) #16	SSR2 (ENSCCAG00000037436) #17	ENSCCAG00000029510	UBQLN4 (ENSCCAG00000036689) #18	LAMTOR2 (ENSCCAG00000026308) #19	RAB25 (ENSCCAG00000021873) #20	MEX3A (ENSCCAG00000022351) #21	LMNA (ENSCCAG00000023432) #22	SEMA4A (ENSCCAG00000032806) #23	SLC25A44 (ENSCCAG00000026588) #25	PMF1 (ENSCCAG00000025850) #26	BGLAP (ENSCCAG00000020525) #27	PAQR6 (ENSCCAG00000027826) #28	SMG5 (ENSCCAG00000027409) #29	TMEM79 (ENSCCAG00000028389) #30	GLMP (ENSCCAG00000034620) #31	ENSCCAG00000011652	CCT3 (ENSCCAG00000033998) #32	TSACC (ENSCCAG00000022149) #33	RHBG (ENSCCAG00000029159)	ENSCCAG00000027166	MEF2D (ENSCCAG00000034560)	IQGAP3 (ENSCCAG00000025509)
Bolivian squirrel monkey	MODERN SPECIES	136	ASH1L (ENSSBOG00000026764)	YY1AP1 (ENSSBOG00000029484)	DAP3 (ENSSBOG00000033972)	MSTO1 (ENSSBOG00000023864)	GON4L (ENSSBOG00000032520)	SYT11 (ENSSBOG00000035584) #12	RIT1 (ENSSBOG00000023350) #13	KHDC4 (ENSSBOG00000034469) #14	RXFP4 (ENSSBOG00000034710)	ARHGEF2 (ENSSBOG00000034006) #16	SSR2 (ENSSBOG00000020706) #17	UBQLN4 (ENSSBOG00000021728) #18	LAMTOR2 (ENSSBOG00000035732) #19	RAB25 (ENSSBOG00000032212) #20	MEX3A (ENSSBOG00000025317) #21	LMNA (ENSSBOG00000014857) #22	SEMA4A (ENSSBOG00000019443) #23	SLC25A44 (ENSSBOG00000020325) #25	PMF1 (ENSSBOG00000034025) #26	BGLAP (ENSSBOG00000026047) #27	PAQR6 (ENSSBOG00000036021) #28	SMG5 (ENSSBOG00000033339) #29	TMEM79 (ENSSBOG00000021483) #30	GLMP (ENSSBOG00000020411) #31	CCT3 (ENSSBOG00000035044) #32	TSACC (ENSSBOG00000020015) #33	RHBG (ENSSBOG00000035568)	ENSSBOG00000035567	MEF2D (ENSSBOG00000033445)	IQGAP3 (ENSSBOG00000021499)	TTC24 (ENSSBOG00000027761)
Marmoset	MODERN SPECIES	9	YY1AP1 (ENSCJAG00000042285)	DAP3 (ENSCJAG00000008125)	ENSCJAG00000063148	GON4L (ENSCJAG00000007977)	SYT11 (ENSCJAG00000043885) #12	ENSCJAG00000032919	RIT1 (ENSCJAG00000061243) #13	KHDC4 (ENSCJAG00000007881) #14	ENSCJAG00000007878 #15	ARHGEF2 (ENSCJAG00000007846) #16	SSR2 (ENSCJAG00000046590) #17	UBQLN4 (ENSCJAG00000007755) #18	LAMTOR2 (ENSCJAG00000007739) #19	RAB25 (ENSCJAG00000007715) #20	MEX3A (ENSCJAG00000007711) #21	LMNA (ENSCJAG00000005413) #22	SEMA4A (ENSCJAG00000005605) #23	SLC25A44 (ENSCJAG00000005625) #25	ENSCJAG00000005636	BGLAP (ENSCJAG00000046802) #27	PAQR6 (ENSCJAG00000005656) #28	SMG5 (ENSCJAG00000005684) #29	TMEM79 (ENSCJAG00000005765) #30	GLMP (ENSCJAG00000005757) #31	ENSCJAG00000005776 #32	TSACC (ENSCJAG00000005831) #33	RHBG (ENSCJAG00000005838)	MEF2D (ENSCJAG00000005848)	IQGAP3 (ENSCJAG00000005862)	ENSCJAG00000006002	NAXE (ENSCJAG00000006018)
Mas night monkey	MODERN SPECIES	1180	YY1AP1 (ENSANAG00000022356)	DAP3 (ENSANAG00000033995)	ENSANAG00000035773	ENSANAG00000026598	GON4L (ENSANAG00000036572)	ENSANAG00000006710	SYT11 (ENSANAG00000020380) #12	RIT1 (ENSANAG00000033671) #13	ENSANAG00000034289 #14	ARHGEF2 (ENSANAG00000038394) #16	SSR2 (ENSANAG00000024178) #17	UBQLN4 (ENSANAG00000031889) #18	LAMTOR2 (ENSANAG00000036124) #19	RAB25 (ENSANAG00000036045) #20	MEX3A (ENSANAG00000032597) #21	LMNA (ENSANAG00000028703) #22	SEMA4A (ENSANAG00000032935) #23	SLC25A44 (ENSANAG00000033058) #25	ENSANAG00000028929	BGLAP (ENSANAG00000034859) #27	PAQR6 (ENSANAG00000023514) #28	SMG5 (ENSANAG00000032899) #29	TMEM79 (ENSANAG00000028444) #30	GLMP (ENSANAG00000020224) #31	ENSANAG00000026737	CCT3 (ENSANAG00000036513) #32	TSACC (ENSANAG00000036292) #33	RHBG (ENSANAG00000024190)	ENSANAG00000033733	MEF2D (ENSANAG00000033064)	IQGAP3 (ENSANAG00000024137)
Tarsier	MODERN SPECIES	4936																LMNA (ENSTSYG00000012988) #22
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Lemuriformes	ANCESTRAL SPECIES	11	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Lemuriformes_a	ANCESTRAL SPECIES	19	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Coquerels sifaka	DUPLICATION
Coquerels sifaka	MODERN SPECIES	750	RUSC1 (ENSPCOG00000025947)	ASH1L (ENSPCOG00000017924)	DAP3 (ENSPCOG00000027412)	MSTO1 (ENSPCOG00000017579)	ENSPCOG00000024149	SYT11 (ENSPCOG00000017038) #12	RIT1 (ENSPCOG00000027211) #13	KHDC4 (ENSPCOG00000027660) #14	ARHGEF2 (ENSPCOG00000016528) #16	ENSPCOG00000019355	SSR2 (ENSPCOG00000022217) #17	UBQLN4 (ENSPCOG00000017664) #18	LAMTOR2 (ENSPCOG00000023468) #19	RAB25 (ENSPCOG00000005144) #20	MEX3A (ENSPCOG00000019307) #21	ENSPCOG00000028240 #22	SEMA4A (ENSPCOG00000021582) #23	SLC25A44 (ENSPCOG00000017429) #25	ENSPCOG00000022530	BGLAP (ENSPCOG00000020241) #27	PAQR6 (ENSPCOG00000024324) #28	SMG5 (ENSPCOG00000004741) #29	TMEM79 (ENSPCOG00000027811) #30	GLMP (ENSPCOG00000027438) #31	CCT3 (ENSPCOG00000027102) #32	TSACC (ENSPCOG00000018038) #33	RHBG (ENSPCOG00000010688)	MEF2D (ENSPCOG00000027219)	IQGAP3 (ENSPCOG00000028184)	TTC24 (ENSPCOG00000018517)	NAXE (ENSPCOG00000005557)
Coquerels sifaka	MODERN SPECIES	589	CCDC194 (ENSPCOG00000017156)	PLVAP (ENSPCOG00000025460)	GTPBP3 (ENSPCOG00000021581)	ANO8 (ENSPCOG00000017390)	DDA1 (ENSPCOG00000020928)	ENSPCOG00000020760	ENSPCOG00000018319	ANKLE1 (ENSPCOG00000002087)	BABAM1 (ENSPCOG00000019257)	USHBP1 (ENSPCOG00000028847)	NR2F6 (ENSPCOG00000018733)	OCEL1 (ENSPCOG00000019966)	USE1 (ENSPCOG00000023271)	MYO9B (ENSPCOG00000017503)	HAUS8 (ENSPCOG00000021851)	ENSPCOG00000024385 #22	ENSPCOG00000020455
Greater bamboo lemur	MODERN SPECIES	1146																LMNA (ENSPSMG00000021251) #22	SEMA4A (ENSPSMG00000021036) #23	SLC25A44 (ENSPSMG00000020969) #25	PMF1 (ENSPSMG00000020960) #26	BGLAP (ENSPSMG00000020939) #27	PAQR6 (ENSPSMG00000020927) #28	SMG5 (ENSPSMG00000020901) #29	TMEM79 (ENSPSMG00000020834) #30	GLMP (ENSPSMG00000020821) #31	ENSPSMG00000020737 #32	TSACC (ENSPSMG00000020661) #33
Mouse lemur	MODERN SPECIES	11	RUSC1 (ENSMICG00000029028)	ASH1L (ENSMICG00000007490)	DAP3 (ENSMICG00000031947)	MSTO1 (ENSMICG00000028414)	ENSMICG00000002183	SYT11 (ENSMICG00000038586) #12	RIT1 (ENSMICG00000044667) #13	KHDC4 (ENSMICG00000002202) #14	ARHGEF2 (ENSMICG00000002212) #16	ENSMICG00000030729	ENSMICG00000038131 #17	UBQLN4 (ENSMICG00000002222) #18	LAMTOR2 (ENSMICG00000002227) #19	RAB25 (ENSMICG00000002230) #20	MEX3A (ENSMICG00000046214) #21	LMNA (ENSMICG00000002236) #22	SEMA4A (ENSMICG00000002242) #23	SLC25A44 (ENSMICG00000047168) #25	ENSMICG00000002248	BGLAP (ENSMICG00000045135) #27	PAQR6 (ENSMICG00000002252) #28	SMG5 (ENSMICG00000002257) #29	TMEM79 (ENSMICG00000002260) #30	GLMP (ENSMICG00000002263) #31	ENSMICG00000038362	ENSMICG00000030201 #32	TSACC (ENSMICG00000002266) #33	RHBG (ENSMICG00000017784)	MEF2D (ENSMICG00000034832)	IQGAP3 (ENSMICG00000008266)	TTC24 (ENSMICG00000008294)
Bushbaby	MODERN SPECIES	206	RUSC1 (ENSOGAG00000025498)	ASH1L (ENSOGAG00000009609)	DAP3 (ENSOGAG00000000845)	MSTO1 (ENSOGAG00000031236)	ENSOGAG00000000849	SYT11 (ENSOGAG00000002258) #12	ENSOGAG00000002260 #13	KHDC4 (ENSOGAG00000002261) #14	ENSOGAG00000026040 #15	ARHGEF2 (ENSOGAG00000011581) #16	SSR2 (ENSOGAG00000016945) #17	UBQLN4 (ENSOGAG00000016948) #18	LAMTOR2 (ENSOGAG00000016953) #19	RAB25 (ENSOGAG00000016955) #20	MEX3A (ENSOGAG00000029891) #21	LMNA (ENSOGAG00000016961) #22	SEMA4A (ENSOGAG00000025069) #23	ENSOGAG00000034650 #25	PMF1 (ENSOGAG00000004964) #26	BGLAP (ENSOGAG00000025659) #27	PAQR6 (ENSOGAG00000031893) #28	SMG5 (ENSOGAG00000004966) #29	TMEM79 (ENSOGAG00000012912) #30	GLMP (ENSOGAG00000030120) #31	CCT3 (ENSOGAG00000008967) #32	TSACC (ENSOGAG00000031578) #33	RHBG (ENSOGAG00000006682)	MEF2D (ENSOGAG00000011222)	IQGAP3 (ENSOGAG00000006690)	TTC24 (ENSOGAG00000030094)	NAXE (ENSOGAG00000034354)
Laurasiatheria	ANCESTRAL SPECIES		ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000157244 #22
Hedgehog	MODERN SPECIES	5326																LMNA (ENSEEUG00000010599) #22
Common shrew	MODERN SPECIES	4141																LMNA (ENSSARG00000000613) #22
Laurasiatheria_a	ANCESTRAL SPECIES		ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000008765
Artiodactyla	ANCESTRAL SPECIES		ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000164230	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346
Suina	ANCESTRAL SPECIES	8	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000164230	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00980000200110	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346
Chacoan peccary	MODERN SPECIES	139	ASH1L (ENSCWAG00000020727)	ENSCWAG00000020755	DAP3 (ENSCWAG00000020775)	MSTO1 (ENSCWAG00000020845)	ENSCWAG00000020896	SYT11 (ENSCWAG00000020979) #12	RIT1 (ENSCWAG00000020995) #13	KHDC4 (ENSCWAG00000007841) #14	ENSCWAG00000007912 #15	ARHGEF2 (ENSCWAG00000007966) #16	SSR2 (ENSCWAG00000008262) #17	UBQLN4 (ENSCWAG00000008403) #18	LAMTOR2 (ENSCWAG00000008520) #19	RAB25 (ENSCWAG00000008570) #20	MEX3A (ENSCWAG00000008643) #21	LMNA (ENSCWAG00000008705) #22	SEMA4A (ENSCWAG00000009047) #23	SLC25A44 (ENSCWAG00000009427) #25	ENSCWAG00000009485	BGLAP (ENSCWAG00000009559) #27	PAQR6 (ENSCWAG00000009611) #28	SMG5 (ENSCWAG00000009746) #29	ENSCWAG00000009845	GLMP (ENSCWAG00000009920) #31	CCT3 (ENSCWAG00000010037) #32	TSACC (ENSCWAG00000010146) #33	RHBG (ENSCWAG00000010166)	MEF2D (ENSCWAG00000010285)	IQGAP3 (ENSCWAG00000010428)	NAXE (ENSCWAG00000010793)	GPATCH4 (ENSCWAG00000010847)
Pig	MODERN SPECIES	12	ENSSSCG00000040632	ASH1L (ENSSSCG00000006508)	DAP3 (ENSSSCG00000006507)	MSTO1 (ENSSSCG00000006157)	ENSSSCG00000006510	SYT11 (ENSSSCG00000006506) #12	RIT1 (ENSSSCG00000023991) #13	KHDC4 (ENSSSCG00000006504) #14	RXFP4 (ENSSSCG00000006503)	ARHGEF2 (ENSSSCG00000006502) #16	SSR2 (ENSSSCG00000006501) #17	UBQLN4 (ENSSSCG00000006500) #18	LAMTOR2 (ENSSSCG00000006499) #19	RAB25 (ENSSSCG00000039186) #20	MEX3A (ENSSSCG00000006497) #21	LMNA (ENSSSCG00000006496) #22	SEMA4A (ENSSSCG00000006495) #23	SLC25A44 (ENSSSCG00000006494) #25	PMF1 (ENSSSCG00000052919)	BGLAP (ENSSSCG00000055767) #27	PAQR6 (ENSSSCG00000006491) #28	SMG5 (ENSSSCG00000006490) #29	TMEM79 (ENSSSCG00000006489) #30	GLMP (ENSSSCG00000006488) #31	CCT3 (ENSSSCG00000006487) #32	TSACC (ENSSSCG00000006486) #33	RHBG (ENSSSCG00000035121)	MEF2D (ENSSSCG00000006482)	IQGAP3 (ENSSSCG00000006475)	TTC24 (ENSSSCG00000006479)	NAXE (ENSSSCG00000006480)
Artiodactyla_a	ANCESTRAL SPECIES		ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000164230	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346
Artiodactyla_b	ANCESTRAL SPECIES		ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000164230	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346
Cetacea	ANCESTRAL SPECIES		ENSGT00900000141074.k	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000164230	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524.a.a #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Odontoceti	ANCESTRAL SPECIES		ENSGT00900000141074.k	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100.g.a #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000164230	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524.a.a #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Odontoceti_a	ANCESTRAL SPECIES		ENSGT00900000141074.k	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100.g.a #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000164230	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524.a.a.a #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Odontoceti_b	ANCESTRAL SPECIES		ENSGT00900000141074.k	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100.g.a #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000164230	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524.a.a.a #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Monodontidae	ANCESTRAL SPECIES		ENSGT00900000141074.k	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100.g.a #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000164230	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524.a.a.a #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Narwhal	MODERN SPECIES	304	ENSMMNG00015012598	RUSC1 (ENSMMNG00015012570)	ASH1L (ENSMMNG00015012492)	DAP3 (ENSMMNG00015012383)	MSTO1 (ENSMMNG00015012309)	ENSMMNG00015012250	SYT11 (ENSMMNG00015012196) #12	RIT1 (ENSMMNG00015012172) #13	KHDC4 (ENSMMNG00015012142) #14	ARHGEF2 (ENSMMNG00015012060) #16	SSR2 (ENSMMNG00015012014) #17	UBQLN4 (ENSMMNG00015011968) #18	ENSMMNG00015011942 #19	RAB25 (ENSMMNG00015011919) #20	MEX3A (ENSMMNG00015011903) #21	LMNA (ENSMMNG00015011841) #22	SEMA4A (ENSMMNG00015011785) #23	SLC25A44 (ENSMMNG00015011755) #25	ENSMMNG00015011739	BGLAP (ENSMMNG00015011726) #27	ENSMMNG00015011675 #28	SMG5 (ENSMMNG00015011588) #29	TMEM79 (ENSMMNG00015011552) #30	GLMP (ENSMMNG00015011520) #31	CCT3 (ENSMMNG00015011489) #32	ENSMMNG00015011474 #33	RHBG (ENSMMNG00015011460)	MEF2D (ENSMMNG00015011394)	IQGAP3 (ENSMMNG00015011098)	TTC24 (ENSMMNG00015011000)	NAXE (ENSMMNG00015010984)
Beluga whale	MODERN SPECIES	69	PKLR (ENSDLEG00000015946)	FDPS (ENSDLEG00000016328)	RUSC1 (ENSDLEG00000016359)	ASH1L (ENSDLEG00000016452)	DAP3 (ENSDLEG00000016565)	MSTO1 (ENSDLEG00000017154)	ENSDLEG00000017562	SYT11 (ENSDLEG00000017715) #12	RIT1 (ENSDLEG00000017727) #13	KIAA0907 (ENSDLEG00000017767) #14	ARHGEF2 (ENSDLEG00000018134) #16	SSR2 (ENSDLEG00000019690) #17	UBQLN4 (ENSDLEG00000019705) #18	ENSDLEG00000019714 #19	RAB25 (ENSDLEG00000019718) #20	LMNA (ENSDLEG00000019723) #22	MEX3A (ENSDLEG00000019727) #21	SEMA4A (ENSDLEG00000019729) #23	SLC25A44 (ENSDLEG00000019739) #25	ENSDLEG00000019747	BGLAP (ENSDLEG00000019752) #27	PAQR6 (ENSDLEG00000019756) #28	SMG5 (ENSDLEG00000019769) #29	TMEM79 (ENSDLEG00000019854) #30	GLMP (ENSDLEG00000019860) #31	CCT3 (ENSDLEG00000019863) #32	ENSDLEG00000019867 #33	RHBG (ENSDLEG00000019871)	MEF2D (ENSDLEG00000019879)	IQGAP3 (ENSDLEG00000019944)	NAXE (ENSDLEG00000020367)
Vaquita	MODERN SPECIES		ENSPSNG00000000654	RUSC1 (ENSPSNG00000000714)	ASH1L (ENSPSNG00000000798)	DAP3 (ENSPSNG00000000898)	MSTO1 (ENSPSNG00000000978)	ENSPSNG00000001061	SYT11 (ENSPSNG00000001267) #12	RIT1 (ENSPSNG00000001303) #13	KHDC4 (ENSPSNG00000001328) #14	ARHGEF2 (ENSPSNG00000001483) #16	SSR2 (ENSPSNG00000001665) #17	UBQLN4 (ENSPSNG00000001709) #18	ENSPSNG00000001753 #19	RAB25 (ENSPSNG00000001780) #20	MEX3A (ENSPSNG00000001802) #21	LMNA (ENSPSNG00000001902) #22	SEMA4A (ENSPSNG00000001991) #23	SLC25A44 (ENSPSNG00000002061) #25	ENSPSNG00000002083	BGLAP (ENSPSNG00000002109) #27	PAQR6 (ENSPSNG00000002135) #28	SMG5 (ENSPSNG00000002185) #29	TMEM79 (ENSPSNG00000002228) #30	GLMP (ENSPSNG00000002245) #31	CCT3 (ENSPSNG00000002288) #32	ENSPSNG00000002309 #33	RHBG (ENSPSNG00000002332)	MEF2D (ENSPSNG00000002434)	IQGAP3 (ENSPSNG00000002502)	TTC24 (ENSPSNG00000002542)	NAXE (ENSPSNG00000002584)
Dolphin	MODERN SPECIES	1345																LMNA (ENSTTRG00000001395) #22	SEMA4A (ENSTTRG00000001397) #23	SLC25A44 (ENSTTRG00000001398) #25	ENSTTRG00000001399	ENSTTRG00000001400 #28	SMG5 (ENSTTRG00000001401) #29	TMEM79 (ENSTTRG00000001404) #30	GLMP (ENSTTRG00000001405) #31	CCT3 (ENSTTRG00000001407) #32	TSACC (ENSTTRG00000001408) #33
Sperm whale	MODERN SPECIES	365																LMNA (ENSPCTG00005019716) #22
Blue whale	MODERN SPECIES		RUSC1 (ENSBMSG00010003260)	ASH1L (ENSBMSG00010003357)	DAP3 (ENSBMSG00010003437)	MSTO1 (ENSBMSG00010003477)	ENSBMSG00010003566	ENSBMSG00010004110	SYT11 (ENSBMSG00010004119) #12	RIT1 (ENSBMSG00010004147) #13	KHDC4 (ENSBMSG00010004174) #14	ARHGEF2 (ENSBMSG00010004265) #16	SSR2 (ENSBMSG00010004540) #17	UBQLN4 (ENSBMSG00010004574) #18	LAMTOR2 (ENSBMSG00010004612) #19	RAB25 (ENSBMSG00010004624) #20	MEX3A (ENSBMSG00010004637) #21	LMNA (ENSBMSG00010004668) #22	SEMA4A (ENSBMSG00010004700) #23	SLC25A44 (ENSBMSG00010004726) #25	ENSBMSG00010004738	BGLAP (ENSBMSG00010004757) #27	SMG5 (ENSBMSG00010004787) #29	TMEM79 (ENSBMSG00010004850) #30	GLMP (ENSBMSG00010004864) #31	CCT3 (ENSBMSG00010004881) #32	RHBG (ENSBMSG00010004893)	MEF2D (ENSBMSG00010004921)	ENSBMSG00010004948	ENSBMSG00010005020	TTC24 (ENSBMSG00010005032)	NAXE (ENSBMSG00010005042)	ENSBMSG00010005049
Pecora	ANCESTRAL SPECIES	2	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256.i.a	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Yarkand deer	MODERN SPECIES	12	FDPS (ENSCHYG00000026456)	RUSC1 (ENSCHYG00000026489)	ASH1L (ENSCHYG00000026415)	ENSCHYG00000026325	MSTO1 (ENSCHYG00000026231)	SYT11 (ENSCHYG00000026203) #12	RIT1 (ENSCHYG00000026149) #13	KHDC4 (ENSCHYG00000025994) #14	ENSCHYG00000025955 #15	ARHGEF2 (ENSCHYG00000025091) #16	SSR2 (ENSCHYG00000024941) #17	UBQLN4 (ENSCHYG00000024829) #18	ENSCHYG00000024792 #19	RAB25 (ENSCHYG00000024758) #20	MEX3A (ENSCHYG00000024742) #21	LMNA (ENSCHYG00000024365) #22	SEMA4A (ENSCHYG00000024199) #23	SLC25A44 (ENSCHYG00000024104) #25	ENSCHYG00000024011	ENSCHYG00000023870 #28	SMG5 (ENSCHYG00000023680) #29	TMEM79 (ENSCHYG00000023640) #30	GLMP (ENSCHYG00000023522) #31	CCT3 (ENSCHYG00000023340) #32	TSACC (ENSCHYG00000023310) #33	RHBG (ENSCHYG00000023227)	MEF2D (ENSCHYG00000022984)	IQGAP3 (ENSCHYG00000022712)	TTC24 (ENSCHYG00000022576)	NAXE (ENSCHYG00000022519)	GPATCH4 (ENSCHYG00000022446)
Percora_a	ANCESTRAL SPECIES	1	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256.i.a.a	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Siberian musk deer	MODERN SPECIES	1202	ASH1L (ENSMMSG00000006966)	DAP3 (ENSMMSG00000006783)	MSTO1 (ENSMMSG00000006647)	ENSMMSG00000006603	ENSMMSG00000005075	SYT11 (ENSMMSG00000004948) #12	RIT1 (ENSMMSG00000004820) #13	KHDC4 (ENSMMSG00000022609) #14	RXFP4 (ENSMMSG00000022594)	ARHGEF2 (ENSMMSG00000022532) #16	SSR2 (ENSMMSG00000022486) #17	UBQLN4 (ENSMMSG00000022457) #18	LAMTOR2 (ENSMMSG00000022447) #19	RAB25 (ENSMMSG00000022435) #20	MEX3A (ENSMMSG00000022428) #21	LMNA (ENSMMSG00000022290) #22	ENSMMSG00000022232	SEMA4A (ENSMMSG00000022204) #23	SLC25A44 (ENSMMSG00000022189) #25	PMF1 (ENSMMSG00000022165) #26	BGLAP (ENSMMSG00000022141) #27	PAQR6 (ENSMMSG00000022081) #28	SMG5 (ENSMMSG00000022024) #29	TMEM79 (ENSMMSG00000022007) #30	GLMP (ENSMMSG00000021977) #31	CCT3 (ENSMMSG00000021905) #32	TSACC (ENSMMSG00000021888) #33	RHBG (ENSMMSG00000021854)	MEF2D (ENSMMSG00000021733)	IQGAP3 (ENSMMSG00000021624)	NAXE (ENSMMSG00000021541)
Bovidae	ANCESTRAL SPECIES	1	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256.i.a.a	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000164230	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346
Bovinae	ANCESTRAL SPECIES	1	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256.i.a.a	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000164230	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Bos	ANCESTRAL SPECIES		ENSGT00900000141074	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256.i.a.a	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000164230	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Bos_a	ANCESTRAL SPECIES	27	ENSGT00900000141074	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256.i.a.a	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000164230	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00390000005534.b.b.c.b.a.a.b.a.b	ENSGT00950000183076.a.b.b.a.b	ENSGT00390000007227.a
Domestic yak	MODERN SPECIES	22	MSTO1 (ENSBGRG00000020857)	ENSBGRG00000021040	ENSBGRG00000021483	ENSBGRG00000021494	SYT11 (ENSBGRG00000021562) #12	RIT1 (ENSBGRG00000021581) #13	KHDC4 (ENSBGRG00000021657) #14	ENSBGRG00000021933 #15	ARHGEF2 (ENSBGRG00000022001) #16	SSR2 (ENSBGRG00000022293) #17	ENSBGRG00000022398	UBQLN4 (ENSBGRG00000022445) #18	ENSBGRG00000022629 #19	RAB25 (ENSBGRG00000022700) #20	MEX3A (ENSBGRG00000022736) #21	LMNA (ENSBGRG00000022777) #22	SEMA4A (ENSBGRG00000023018) #23	SLC25A44 (ENSBGRG00000023097) #25	ENSBGRG00000023141	BGLAP (ENSBGRG00000023200) #27	PAQR6 (ENSBGRG00000023244) #28	SMG5 (ENSBGRG00000023383) #29	ENSBGRG00000023682	GLMP (ENSBGRG00000023724) #31	CCT3 (ENSBGRG00000023849) #32	TSACC (ENSBGRG00000024207) #33	RHBG (ENSBGRG00000024238)	ENSBGRG00000024335	ENSBGRG00000024360	ENSBGRG00000024425	ENSBGRG00000024445
Wild yak	MODERN SPECIES	1034	RUSC1 (ENSBMUG00000013186)	ASH1L (ENSBMUG00000013247)	DAP3 (ENSBMUG00000013380)	MSTO1 (ENSBMUG00000013423)	ENSBMUG00000013609	SYT11 (ENSBMUG00000013663) #12	RIT1 (ENSBMUG00000013671) #13	KHDC4 (ENSBMUG00000013747) #14	ENSBMUG00000013792 #15	ARHGEF2 (ENSBMUG00000013945) #16	SSR2 (ENSBMUG00000014061) #17	UBQLN4 (ENSBMUG00000014079) #18	ENSBMUG00000014101 #19	RAB25 (ENSBMUG00000014113) #20	MEX3A (ENSBMUG00000014139) #21	LMNA (ENSBMUG00000014271) #22	SEMA4A (ENSBMUG00000014414) #23	SLC25A44 (ENSBMUG00000014438) #25	ENSBMUG00000014459	PAQR6 (ENSBMUG00000014479) #28	SMG5 (ENSBMUG00000014498) #29	TMEM79 (ENSBMUG00000014504) #30	GLMP (ENSBMUG00000014534) #31	CCT3 (ENSBMUG00000014597) #32	TSACC (ENSBMUG00000014639) #33	RHBG (ENSBMUG00000014644)	MEF2D (ENSBMUG00000014724)	ENSBMUG00000014767	IQGAP3 (ENSBMUG00000015133)	NAXE (ENSBMUG00000015409)	GPATCH4 (ENSBMUG00000015443)
Bos_b	ANCESTRAL SPECIES	1	ENSGT00900000141074	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256.i.a.a	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000164230	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Cow	MODERN SPECIES	22	RUSC1 (ENSBTAG00000054061)	ASH1L (ENSBTAG00000003954)	DAP3 (ENSBTAG00000001199)	MSTO1 (ENSBTAG00000026613)	ENSBTAG00000045596	GON4L (ENSBTAG00000020356)	SYT11 (ENSBTAG00000011209) #12	RIT1 (ENSBTAG00000000105) #13	KHDC4 (ENSBTAG00000000108)	ARHGEF2 (ENSBTAG00000000113) #16	SSR2 (ENSBTAG00000001212) #17	UBQLN4 (ENSBTAG00000001548) #18	LAMTOR2 (ENSBTAG00000011754) #19	RAB25 (ENSBTAG00000018914) #20	MEX3A (ENSBTAG00000019158) #21	LMNA (ENSBTAG00000017574) #22	SEMA4A (ENSBTAG00000012228) #23	SLC25A44 (ENSBTAG00000009431) #25	PMF1 (ENSBTAG00000009432)	BGLAP (ENSBTAG00000009433) #27	PAQR6 (ENSBTAG00000009434) #28	SMG5 (ENSBTAG00000009435) #29	TMEM79 (ENSBTAG00000009436) #30	GLMP (ENSBTAG00000006364) #31	CCT3 (ENSBTAG00000006370) #32	TSACC (ENSBTAG00000049722) #33	RHBG (ENSBTAG00000012234)	MEF2D (ENSBTAG00000046545)	ENSBTAG00000021649	IQGAP3 (ENSBTAG00000006882)	TTC24 (ENSBTAG00000000401)
Hybrid Bos Indicus	MODERN SPECIES	22	RUSC1 (ENSBIXG00005012185)	ASH1L (ENSBIXG00005012290)	DAP3 (ENSBIXG00005012416)	MSTO1 (ENSBIXG00005012454)	ENSBIXG00005000325	SYT11 (ENSBIXG00005012585) #12	RIT1 (ENSBIXG00005012630) #13	KHDC4 (ENSBIXG00005012701) #14	ENSBIXG00005012726 #15	ARHGEF2 (ENSBIXG00005012933) #16	SSR2 (ENSBIXG00005013052) #17	UBQLN4 (ENSBIXG00005007481) #18	LAMTOR2 (ENSBIXG00005013118) #19	RAB25 (ENSBIXG00005001504) #20	MEX3A (ENSBIXG00005013155) #21	LMNA (ENSBIXG00005013303) #22	SEMA4A (ENSBIXG00005013357) #23	SLC25A44 (ENSBIXG00005013383) #25	ENSBIXG00005013392	BGLAP (ENSBIXG00005013414) #27	PAQR6 (ENSBIXG00005001616) #28	SMG5 (ENSBIXG00005013497) #29	TMEM79 (ENSBIXG00005013531) #30	GLMP (ENSBIXG00005013569) #31	CCT3 (ENSBIXG00005013620) #32	TSACC (ENSBIXG00005013651) #33	RHBG (ENSBIXG00005013672)	MEF2D (ENSBIXG00005013762)	IQGAP3 (ENSBIXG00005013848)	NAXE (ENSBIXG00005013984)	GPATCH4 (ENSBIXG00005001766)
American bison	MODERN SPECIES	3022	ASH1L (ENSBBBG00000014991)	DAP3 (ENSBBBG00000003747)	MSTO1 (ENSBBBG00000015135)	ENSBBBG00000015141	ENSBBBG00000007558	SYT11 (ENSBBBG00000003798) #12	RIT1 (ENSBBBG00000015315) #13	KHDC4 (ENSBBBG00000001328) #14	RXFP4 (ENSBBBG00000001313)	ARHGEF2 (ENSBBBG00000001262) #16	SSR2 (ENSBBBG00000003501) #17	UBQLN4 (ENSBBBG00000007559) #18	LAMTOR2 (ENSBBBG00000003825) #19	RAB25 (ENSBBBG00000003829) #20	MEX3A (ENSBBBG00000015363) #21	LMNA (ENSBBBG00000003866) #22	SEMA4A (ENSBBBG00000003444) #23	SLC25A44 (ENSBBBG00000003424) #25	PMF1 (ENSBBBG00000015627) #26	BGLAP (ENSBBBG00000015635) #27	PAQR6 (ENSBBBG00000015650) #28	SMG5 (ENSBBBG00000015667) #29	ENSBBBG00000003912	GLMP (ENSBBBG00000015689) #31	CCT3 (ENSBBBG00000015738) #32	TSACC (ENSBBBG00000015743) #33	RHBG (ENSBBBG00000003929)	MEF2D (ENSBBBG00000000772)	IQGAP3 (ENSBBBG00000007083)	NAXE (ENSBBBG00000016391)	GPATCH4 (ENSBBBG00000016396)
Caprinae	ANCESTRAL SPECIES	2	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256.i.a.a	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00390000007227.a	ENSGT00390000008765
Goat	MODERN SPECIES	22	DAP3 (ENSCHIG00000017638)	MSTO1 (ENSCHIG00000027233)	ENSCHIG00000021776	ENSCHIG00000011207	ENSCHIG00000025192	SYT11 (ENSCHIG00000021455) #12	RIT1 (ENSCHIG00000010506) #13	KHDC4 (ENSCHIG00000022965) #14	ENSCHIG00000012796 #15	ARHGEF2 (ENSCHIG00000018812) #16	SSR2 (ENSCHIG00000027199) #17	UBQLN4 (ENSCHIG00000015053) #18	LAMTOR2 (ENSCHIG00000026461) #19	RAB25 (ENSCHIG00000018911) #20	MEX3A (ENSCHIG00000012770) #21	LMNA (ENSCHIG00000022777) #22	SEMA4A (ENSCHIG00000022763) #23	SLC25A44 (ENSCHIG00000011510) #25	ENSCHIG00000025721	BGLAP (ENSCHIG00000025718) #27	PAQR6 (ENSCHIG00000019473) #28	SMG5 (ENSCHIG00000007709) #29	TMEM79 (ENSCHIG00000024223) #30	GLMP (ENSCHIG00000018226) #31	CCT3 (ENSCHIG00000011665) #32	TSACC (ENSCHIG00000008701) #33	RHBG (ENSCHIG00000018535)	MEF2D (ENSCHIG00000010363)	IQGAP3 (ENSCHIG00000026372)	NAXE (ENSCHIG00000014440)	GPATCH4 (ENSCHIG00000021295)
Rambouillet Sheep	MODERN SPECIES		MSTO1 (ENSOARG00020013057)	ENSOARG00020013143	ENSOARG00020013192	ENSOARG00020013774	SYT11 (ENSOARG00020013872) #12	RIT1 (ENSOARG00020013942) #13	KHDC4 (ENSOARG00020014119) #14	RXFP4 (ENSOARG00020014277)	ARHGEF2 (ENSOARG00020014346) #16	SSR2 (ENSOARG00020015600) #17	ENSOARG00020015739	UBQLN4 (ENSOARG00020015789) #18	LAMTOR2 (ENSOARG00020015838) #19	RAB25 (ENSOARG00020015913) #20	MEX3A (ENSOARG00020015946) #21	LMNA (ENSOARG00020016018) #22	SEMA4A (ENSOARG00020016412) #23	SLC25A44 (ENSOARG00020016505) #25	PMF1 (ENSOARG00020016596) #26	BGLAP (ENSOARG00020016735) #27	PAQR6 (ENSOARG00020016793) #28	SMG5 (ENSOARG00020016889) #29	TMEM79 (ENSOARG00020017071) #30	GLMP (ENSOARG00020017115) #31	CCT3 (ENSOARG00020017271) #32	TSACC (ENSOARG00020017382) #33	RHBG (ENSOARG00020017414)	MEF2D (ENSOARG00020017561)	IQGAP3 (ENSOARG00020018796)	NAXE (ENSOARG00020026107)	GPATCH4 (ENSOARG00020026108)
Camelidae	ANCESTRAL SPECIES	6	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00390000007227.a	ENSGT00390000008765	ENSGT00940000161384
Arabian camel	MODERN SPECIES	13	ENSCDRG00005008918	DAP3 (ENSCDRG00005008986)	ENSCDRG00005009290	ENSCDRG00005009473	MSTO1 (ENSCDRG00005009513)	SYT11 (ENSCDRG00005009687) #12	RIT1 (ENSCDRG00005009734) #13	ENSCDRG00005009887	RXFP4 (ENSCDRG00005009989)	ARHGEF2 (ENSCDRG00005010064) #16	SSR2 (ENSCDRG00005010971) #17	UBQLN4 (ENSCDRG00005011159) #18	LAMTOR2 (ENSCDRG00005011283) #19	RAB25 (ENSCDRG00005011364) #20	MEX3A (ENSCDRG00005011401) #21	LMNA (ENSCDRG00005011469) #22	SEMA4A (ENSCDRG00005011665) #23	SLC25A44 (ENSCDRG00005011792) #25	BGLAP (ENSCDRG00005011888) #27	PAQR6 (ENSCDRG00005011936) #28	SMG5 (ENSCDRG00005012076) #29	TMEM79 (ENSCDRG00005012417) #30	GLMP (ENSCDRG00005012477) #31	CCT3 (ENSCDRG00005012596) #32	TSACC (ENSCDRG00005012775) #33	RHBG (ENSCDRG00005012851)	MEF2D (ENSCDRG00005012987)	IQGAP3 (ENSCDRG00005013249)	NAXE (ENSCDRG00005013371)	ENSCDRG00005013417	HAPLN2 (ENSCDRG00005013516)
Laurasiatheria_b	ANCESTRAL SPECIES		ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000008765
Carnivora	ANCESTRAL SPECIES	14	ENSGT00900000141074	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Felidae	ANCESTRAL SPECIES	11	ENSGT00900000141074	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Panthera	ANCESTRAL SPECIES	38	ENSGT00390000008859.b.c	ENSGT00900000141074	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000164230	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Tiger	MODERN SPECIES	274	CLK2 (ENSPTIG00000010873)	HCN3 (ENSPTIG00000009244)	ENSPTIG00000008406	ASH1L (ENSPTIG00000019713)	DAP3 (ENSPTIG00000015443)	ENSPTIG00000013227	ENSPTIG00000007985	SYT11 (ENSPTIG00000007723) #12	RIT1 (ENSPTIG00000007045) #13	KHDC4 (ENSPTIG00000004498) #14	ENSPTIG00000001215 #16	SSR2 (ENSPTIG00000022102) #17	UBQLN4 (ENSPTIG00000022083) #18	LAMTOR2 (ENSPTIG00000022068) #19	RAB25 (ENSPTIG00000022049) #20	ENSPTIG00000021888 #22	SEMA4A (ENSPTIG00000016788) #23	SLC25A44 (ENSPTIG00000011099) #25	SMG5 (ENSPTIG00000007892) #29	TMEM79 (ENSPTIG00000007414) #30	GLMP (ENSPTIG00000004054) #31	CCT3 (ENSPTIG00000018610) #32	TSACC (ENSPTIG00000016816) #33	RHBG (ENSPTIG00000015826)	IQGAP3 (ENSPTIG00000013068)	TTC24 (ENSPTIG00000010925)	NAXE (ENSPTIG00000009667)	GPATCH4 (ENSPTIG00000006717)	ENSPTIG00000006345	BCAN (ENSPTIG00000000602)	NES (ENSPTIG00000021721)
Panthera_a	ANCESTRAL SPECIES	37	ENSGT00390000008859.b.c	ENSGT00900000141074	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000164230	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
leopard	MODERN SPECIES	138	FDPS (ENSPPRG00000017484)	ENSPPRG00000015592	ASH1L (ENSPPRG00000014648)	ENSPPRG00000011971	DAP3 (ENSPPRG00000011800)	ENSPPRG00000008799	SYT11 (ENSPPRG00000000652) #12	RIT1 (ENSPPRG00000000399) #13	KHDC4 (ENSPPRG00000021149) #14	ARHGEF2 (ENSPPRG00000018064) #16	SSR2 (ENSPPRG00000009542) #17	UBQLN4 (ENSPPRG00000008090) #18	LAMTOR2 (ENSPPRG00000007518) #19	RAB25 (ENSPPRG00000006611) #20	MEX3A (ENSPPRG00000006585) #21	LMNA (ENSPPRG00000003442) #22	SEMA4A (ENSPPRG00000024539) #23	ENSPPRG00000017448 #25	ENSPPRG00000016604 #25	ENSPPRG00000015181	BGLAP (ENSPPRG00000013703) #27	PAQR6 (ENSPPRG00000013590) #28	ENSPPRG00000012440 #28	SMG5 (ENSPPRG00000011901) #29	TMEM79 (ENSPPRG00000011226) #30	GLMP (ENSPPRG00000010044) #31	CCT3 (ENSPPRG00000008924) #32	TSACC (ENSPPRG00000007969) #33	RHBG (ENSPPRG00000007022)	MEF2D (ENSPPRG00000005807)	IQGAP3 (ENSPPRG00000004143)
lion	MODERN SPECIES	44	PKLR (ENSPLOG00000008753)	FDPS (ENSPLOG00000008651)	RUSC1 (ENSPLOG00000008579)	ASH1L (ENSPLOG00000008458)	ENSPLOG00000008379	ENSPLOG00000008203	SYT11 (ENSPLOG00000008151) #12	RIT1 (ENSPLOG00000008053) #13	KHDC4 (ENSPLOG00000007865) #14	ARHGEF2 (ENSPLOG00000007611) #16	SSR2 (ENSPLOG00000007527) #17	UBQLN4 (ENSPLOG00000007496) #18	LAMTOR2 (ENSPLOG00000007417) #19	RAB25 (ENSPLOG00000007385) #20	MEX3A (ENSPLOG00000007367) #21	LMNA (ENSPLOG00000007050) #22	SEMA4A (ENSPLOG00000006968) #23	SLC25A44 (ENSPLOG00000006937) #25	ENSPLOG00000006903	BGLAP (ENSPLOG00000006890) #27	PAQR6 (ENSPLOG00000006831) #28	SMG5 (ENSPLOG00000006798) #29	ENSPLOG00000006758	GLMP (ENSPLOG00000006693) #31	CCT3 (ENSPLOG00000006587) #32	TSACC (ENSPLOG00000006484) #33	RHBG (ENSPLOG00000006433)	MEF2D (ENSPLOG00000006383)	IQGAP3 (ENSPLOG00000006262)	ENSPLOG00000006205	NAXE (ENSPLOG00000006161)
Cat	MODERN SPECIES	248	ASH1L (ENSFCAG00000012088)	DAP3 (ENSFCAG00000022787)	MSTO1 (ENSFCAG00000030966)	ENSFCAG00000012133	SYT11 (ENSFCAG00000029675) #12	ENSFCAG00000037260 #13	RIT1 (ENSFCAG00000044860) #13	KHDC4 (ENSFCAG00000012137) #14	ARHGEF2 (ENSFCAG00000030294) #16	SSR2 (ENSFCAG00000043703) #17	ENSFCAG00000050566	UBQLN4 (ENSFCAG00000011772) #18	LAMTOR2 (ENSFCAG00000028596) #19	RAB25 (ENSFCAG00000011775) #20	MEX3A (ENSFCAG00000044236) #21	LMNA (ENSFCAG00000011776) #22	SEMA4A (ENSFCAG00000011779) #23	SLC25A44 (ENSFCAG00000011780) #25	PMF1 (ENSFCAG00000011781) #26	BGLAP (ENSFCAG00000048978) #27	PAQR6 (ENSFCAG00000000759) #28	SMG5 (ENSFCAG00000011783) #29	TMEM79 (ENSFCAG00000011787) #30	GLMP (ENSFCAG00000011788) #31	CCT3 (ENSFCAG00000011789) #32	TSACC (ENSFCAG00000029523) #33	RHBG (ENSFCAG00000011790)	MEF2D (ENSFCAG00000024020)	IQGAP3 (ENSFCAG00000006549)	TTC24 (ENSFCAG00000046777)	GPATCH4 (ENSFCAG00000006554)
Caniformia	ANCESTRAL SPECIES	10	ENSGT00900000141074	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Caniformia_b	ANCESTRAL SPECIES	8	ENSGT00900000141074	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Ursidae	ANCESTRAL SPECIES	4	ENSGT00900000141074.p	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256.f	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT00940000158341 #16	ENSGT00390000005125.d #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00390000007227.a	ENSGT00390000008765
Ursus	ANCESTRAL SPECIES	154															ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000164230	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00390000007227.a	ENSGT00390000008765
American black bear	MODERN SPECIES	22															MEX3A (ENSUAMG00000013807) #21	LMNA (ENSUAMG00000013784) #22	SEMA4A (ENSUAMG00000013756) #23	SLC25A44 (ENSUAMG00000013742) #25	ENSUAMG00000013738	BGLAP (ENSUAMG00000013735) #27	PAQR6 (ENSUAMG00000013731) #28	SMG5 (ENSUAMG00000013721) #29	TMEM79 (ENSUAMG00000013715) #30	GLMP (ENSUAMG00000013710) #31	CCT3 (ENSUAMG00000013707) #32	TSACC (ENSUAMG00000013704) #33	RHBG (ENSUAMG00000013701)
Polar bear	MODERN SPECIES	200	ENSUMAG00000019472	FDPS (ENSUMAG00000019468)	ASH1L (ENSUMAG00000019455)	ENSUMAG00000019450	DAP3 (ENSUMAG00000019443)	MSTO1 (ENSUMAG00000019384)	ENSUMAG00000018608	SYT11 (ENSUMAG00000018466) #12	RIT1 (ENSUMAG00000018455) #13	KHDC4 (ENSUMAG00000018427) #14	ARHGEF2 (ENSUMAG00000018398) #16	SSR2 (ENSUMAG00000018391) #17	ENSUMAG00000018385 #18	ENSUMAG00000018379	RAB25 (ENSUMAG00000018376) #20	LMNA (ENSUMAG00000018354) #22	SEMA4A (ENSUMAG00000018344) #23	SLC25A44 (ENSUMAG00000018341) #25	ENSUMAG00000018338	BGLAP (ENSUMAG00000018334) #27	ENSUMAG00000018331	SMG5 (ENSUMAG00000018041) #29	GLMP (ENSUMAG00000017987) #31	CCT3 (ENSUMAG00000017983) #32	TSACC (ENSUMAG00000017979) #33	RHBG (ENSUMAG00000017948)	MEF2D (ENSUMAG00000017857)	IQGAP3 (ENSUMAG00000017820)	ENSUMAG00000017807	GPATCH4 (ENSUMAG00000017797)	ENSUMAG00000017794
Giant Panda	MODERN SPECIES	18	PKLR (ENSAMEG00000000055)	FDPS (ENSAMEG00000000050)	ENSAMEG00000026390	ASH1L (ENSAMEG00000000049)	DAP3 (ENSAMEG00000000047)	MSTO1 (ENSAMEG00000000045)	ENSAMEG00000000043	SYT11 (ENSAMEG00000000041) #12	RIT1 (ENSAMEG00000000040) #13	KHDC4 (ENSAMEG00000000037) #14	ARHGEF2 (ENSAMEG00000000035) #16	SSR2 (ENSAMEG00000014198) #17	ENSAMEG00000028885 #19	RAB25 (ENSAMEG00000014249) #20	MEX3A (ENSAMEG00000014265) #21	LMNA (ENSAMEG00000014270) #22	SEMA4A (ENSAMEG00000014336) #23	SLC25A44 (ENSAMEG00000014397) #25	PMF1 (ENSAMEG00000014403) #26	BGLAP (ENSAMEG00000014417) #27	PAQR6 (ENSAMEG00000014419) #28	SMG5 (ENSAMEG00000014458) #29	TMEM79 (ENSAMEG00000014512) #30	GLMP (ENSAMEG00000014517) #31	CCT3 (ENSAMEG00000014524) #32	TSACC (ENSAMEG00000025844) #33	RHBG (ENSAMEG00000014562)	MEF2D (ENSAMEG00000014630)	IQGAP3 (ENSAMEG00000014672)	NAXE (ENSAMEG00000014814)	GPATCH4 (ENSAMEG00000014829)
Mustelinae	ANCESTRAL SPECIES	23	ENSGT00900000141074.m	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Ferret	MODERN SPECIES	441	ENSMPUG00000005496	ENSMPUG00000005484	ASH1L (ENSMPUG00000005465)	DAP3 (ENSMPUG00000005314)	MSTO1 (ENSMPUG00000005298)	ENSMPUG00000005274	SYT11 (ENSMPUG00000005268) #12	RIT1 (ENSMPUG00000005245) #13	KHDC4 (ENSMPUG00000005186) #14	ARHGEF2 (ENSMPUG00000005016) #16	SSR2 (ENSMPUG00000004963) #17	UBQLN4 (ENSMPUG00000004855) #18	LAMTOR2 (ENSMPUG00000004826) #19	RAB25 (ENSMPUG00000004790) #20	MEX3A (ENSMPUG00000004774) #21	LMNA (ENSMPUG00000004761) #22	SEMA4A (ENSMPUG00000004742) #23	SLC25A44 (ENSMPUG00000004717) #25	PMF1 (ENSMPUG00000004672) #26	BGLAP (ENSMPUG00000004628) #27	PAQR6 (ENSMPUG00000004566) #28	SMG5 (ENSMPUG00000004546) #29	TMEM79 (ENSMPUG00000004531) #30	GLMP (ENSMPUG00000004537) #31	CCT3 (ENSMPUG00000004401) #32	TSACC (ENSMPUG00000004391) #33	RHBG (ENSMPUG00000004385)	ENSMPUG00000018432	MEF2D (ENSMPUG00000004235)	ENSMPUG00000018431	IQGAP3 (ENSMPUG00000004216)
American mink	MODERN SPECIES	260	PKLR (ENSNVIG00000019507)	FDPS (ENSNVIG00000019613)	ENSNVIG00000019622	ASH1L (ENSNVIG00000019642)	DAP3 (ENSNVIG00000019822)	MSTO1 (ENSNVIG00000019933)	ENSNVIG00000019964	SYT11 (ENSNVIG00000020257) #12	RIT1 (ENSNVIG00000020272) #13	ENSNVIG00000020342 #14	ARHGEF2 (ENSNVIG00000020356) #16	SSR2 (ENSNVIG00000020385) #17	UBQLN4 (ENSNVIG00000020416) #18	LAMTOR2 (ENSNVIG00000020427) #19	RAB25 (ENSNVIG00000020433) #20	LMNA (ENSNVIG00000020473) #22	SEMA4A (ENSNVIG00000020558) #23	SLC25A44 (ENSNVIG00000020603) #25	ENSNVIG00000020609	BGLAP (ENSNVIG00000020619) #27	ENSNVIG00000020635 #28	SMG5 (ENSNVIG00000020654) #29	ENSNVIG00000020679	GLMP (ENSNVIG00000020700) #31	CCT3 (ENSNVIG00000020748) #32	TSACC (ENSNVIG00000020774) #33	RHBG (ENSNVIG00000020780)	ENSNVIG00000020791	IQGAP3 (ENSNVIG00000020810)	TTC24 (ENSNVIG00000020904)	NAXE (ENSNVIG00000020938)
Canidae	ANCESTRAL SPECIES	1	ENSGT00900000141074	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000164230	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Canis_lupus	ANCESTRAL SPECIES	4	ENSGT00900000141074	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000164230	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Dingo	MODERN SPECIES	271	FDPS (ENSCAFG00020006959)	ENSCAFG00020006949	ASH1L (ENSCAFG00020006713)	DAP3 (ENSCAFG00020006662)	MSTO1 (ENSCAFG00020006658)	ENSCAFG00020006650	SYT11 (ENSCAFG00020006484) #12	RIT1 (ENSCAFG00020006481) #13	KHDC4 (ENSCAFG00020006317) #14	ARHGEF2 (ENSCAFG00020006291) #16	SSR2 (ENSCAFG00020006268) #17	UBQLN4 (ENSCAFG00020006198) #18	ENSCAFG00020006183 #19	RAB25 (ENSCAFG00020006179) #20	MEX3A (ENSCAFG00020006171) #21	LMNA (ENSCAFG00020006147) #22	SEMA4A (ENSCAFG00020006101) #23	SLC25A44 (ENSCAFG00020006099) #25	ENSCAFG00020006096	BGLAP (ENSCAFG00020006091) #27	PAQR6 (ENSCAFG00020006075) #28	SMG5 (ENSCAFG00020006061) #29	TMEM79 (ENSCAFG00020006056) #30	GLMP (ENSCAFG00020006053) #31	CCT3 (ENSCAFG00020005487) #32	TSACC (ENSCAFG00020005438) #33	RHBG (ENSCAFG00020005431)	MEF2D (ENSCAFG00020005413)	IQGAP3 (ENSCAFG00020005293)	NAXE (ENSCAFG00020005285)	ENSCAFG00020005274
Dog	MODERN SPECIES	35	FDPS (ENSCAFG00845011910)	RUSC1 (ENSCAFG00845011825)	ASH1L (ENSCAFG00845011740)	DAP3 (ENSCAFG00845011528)	MSTO1 (ENSCAFG00845011422)	ENSCAFG00845011319	SYT11 (ENSCAFG00845011235) #12	RIT1 (ENSCAFG00845011170) #13	KHDC4 (ENSCAFG00845011090) #14	ARHGEF2 (ENSCAFG00845010726) #16	SSR2 (ENSCAFG00845010530) #17	UBQLN4 (ENSCAFG00845010456) #18	LAMTOR2 (ENSCAFG00845010372) #19	RAB25 (ENSCAFG00845010319) #20	MEX3A (ENSCAFG00845010291) #21	LMNA (ENSCAFG00845010163) #22	SEMA4A (ENSCAFG00845010023) #23	SLC25A44 (ENSCAFG00845009963) #25	BGLAP (ENSCAFG00845009909) #27	SMG5 (ENSCAFG00845009772) #29	PAQR6 (ENSCAFG00845009665) #28	TMEM79 (ENSCAFG00845009619) #30	GLMP (ENSCAFG00845009558) #31	CCT3 (ENSCAFG00845009435) #32	RHBG (ENSCAFG00845009336)	MEF2D (ENSCAFG00845009027)	IQGAP3 (ENSCAFG00845008852)	ENSCAFG00845008793	NAXE (ENSCAFG00845008732)	ENSCAFG00845008688	HAPLN2 (ENSCAFG00845008623)
Red fox	MODERN SPECIES	23	FDPS (ENSVVUG00000004041)	RUSC1 (ENSVVUG00000004055)	ASH1L (ENSVVUG00000004069)	DAP3 (ENSVVUG00000004090)	MSTO1 (ENSVVUG00000004113)	ENSVVUG00000004239	SYT11 (ENSVVUG00000005667) #12	RIT1 (ENSVVUG00000005671) #13	KHDC4 (ENSVVUG00000005679) #14	ARHGEF2 (ENSVVUG00000005746) #16	SSR2 (ENSVVUG00000005756) #17	UBQLN4 (ENSVVUG00000005763) #18	LAMTOR2 (ENSVVUG00000005816) #19	RAB25 (ENSVVUG00000005821) #20	MEX3A (ENSVVUG00000005834) #21	LMNA (ENSVVUG00000005843) #22	ENSVVUG00000005853 #23	ENSVVUG00000005856 #23	SLC25A44 (ENSVVUG00000005863) #25	ENSVVUG00000005870	BGLAP (ENSVVUG00000005877) #27	PAQR6 (ENSVVUG00000005883) #28	SMG5 (ENSVVUG00000005887) #29	TMEM79 (ENSVVUG00000005892) #30	GLMP (ENSVVUG00000005893) #31	CCT3 (ENSVVUG00000005916) #32	ENSVVUG00000005925 #33	RHBG (ENSVVUG00000005930)	MEF2D (ENSVVUG00000005939)	IQGAP3 (ENSVVUG00000005972)	NAXE (ENSVVUG00000005999)
Laurasiatheria_c	ANCESTRAL SPECIES		ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Chiroptera	ANCESTRAL SPECIES	20	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Megabat	MODERN SPECIES	1703																LMNA (ENSPVAG00000016740) #22	SEMA4A (ENSPVAG00000016741) #23	SLC25A44 (ENSPVAG00000016744) #25	ENSPVAG00000016745	ENSPVAG00000016747 #28	SMG5 (ENSPVAG00000016748) #29	GLMP (ENSPVAG00000016753) #31	CCT3 (ENSPVAG00000016756) #32	TSACC (ENSPVAG00000016762) #33	ENSPVAG00000016764
Microchiroptera	ANCESTRAL SPECIES	21	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT01030000234534.B.a.a.b	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000162656 #26	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Microbat	MODERN SPECIES	1148	RUSC1 (ENSMLUG00000013446)	ASH1L (ENSMLUG00000013461)	DAP3 (ENSMLUG00000005848)	MSTO1 (ENSMLUG00000009855)	ENSMLUG00000009868	SYT11 (ENSMLUG00000009918) #12	RIT1 (ENSMLUG00000009935) #13	KHDC4 (ENSMLUG00000009967) #14	RXFP4 (ENSMLUG00000010023)	ARHGEF2 (ENSMLUG00000010039) #16	SSR2 (ENSMLUG00000010102) #17	UBQLN4 (ENSMLUG00000010131) #18	ENSMLUG00000023871 #19	RAB25 (ENSMLUG00000010153) #20	MEX3A (ENSMLUG00000010185) #21	LMNA (ENSMLUG00000026412) #22	SEMA4A (ENSMLUG00000000639) #23	SLC25A44 (ENSMLUG00000008481) #25	PMF1 (ENSMLUG00000008489) #26	BGLAP (ENSMLUG00000029723) #27	PAQR6 (ENSMLUG00000008500) #28	SMG5 (ENSMLUG00000008518) #29	TMEM79 (ENSMLUG00000008551) #30	GLMP (ENSMLUG00000008556) #31	CCT3 (ENSMLUG00000015678) #32	RHBG (ENSMLUG00000008585)	ENSMLUG00000030150	ENSMLUG00000029510	MEF2D (ENSMLUG00000013967)	IQGAP3 (ENSMLUG00000009473)	TTC24 (ENSMLUG00000009528)
Greater horseshoe bat	MODERN SPECIES	14	RUSC1 (ENSRFEG00010013073)	ASH1L (ENSRFEG00010013223)	DAP3 (ENSRFEG00010013351)	MSTO1 (ENSRFEG00010013673)	ENSRFEG00010013759	SYT11 (ENSRFEG00010014057) #12	RIT1 (ENSRFEG00010014140) #13	KHDC4 (ENSRFEG00010014273) #14	RXFP4 (ENSRFEG00010014369)	ARHGEF2 (ENSRFEG00010014408) #16	SSR2 (ENSRFEG00010014692) #17	UBQLN4 (ENSRFEG00010014900) #18	ENSRFEG00010014949 #19	RAB25 (ENSRFEG00010015038) #20	MEX3A (ENSRFEG00010015157) #21	LMNA (ENSRFEG00010015236) #22	SEMA4A (ENSRFEG00010015377) #23	SLC25A44 (ENSRFEG00010015502) #25	PMF1 (ENSRFEG00010015555) #26	BGLAP (ENSRFEG00010015652) #27	PAQR6 (ENSRFEG00010015723) #28	SMG5 (ENSRFEG00010015872) #29	TMEM79 (ENSRFEG00010015938) #30	GLMP (ENSRFEG00010016041) #31	CCT3 (ENSRFEG00010010707) #32	TSACC (ENSRFEG00010010848) #33	RHBG (ENSRFEG00010010915)	MEF2D (ENSRFEG00010010994)	IQGAP3 (ENSRFEG00010011228)	NAXE (ENSRFEG00010012092)	GPATCH4 (ENSRFEG00010012165)
Equus	ANCESTRAL SPECIES	3	ENSGT00900000141074	ENSGT00900000141033.b.b	ENSGT00940000156698	ENSGT00390000015248	ENSGT00530000064067	ENSGT00390000016256	ENSGT00940000159088 #12	ENSGT00940000160132 #13	ENSGT00510000047412.a #14	ENSGT00940000158341 #16	ENSGT00390000005125 #17	ENSGT00940000155620 #18	ENSGT00390000006100 #19	ENSGT00940000158230 #20	ENSGT00940000161732 #21	ENSGT00940000157244 #22	ENSGT00940000161509 #23	ENSGT00940000155399 #25	ENSGT00940000164230	ENSGT00410000026290 #27	ENSGT00940000160567 #28	ENSGT00940000154566 #29	ENSGT00390000002390.b #30	ENSGT00390000005131 #31	ENSGT00570000079224 #32	ENSGT00390000012524 #33	ENSGT00950000182844.b.b.a	ENSGT00940000159463	ENSGT00950000183076.a.b.b.a.b	ENSGT00730000111346	ENSGT00390000007227.a
Donkey	MODERN SPECIES	17	ENSEASG00005010484	ENSEASG00005019185	ENSEASG00005024932	DAP3 (ENSEASG00005019165)	ENSEASG00005019163	ENSEASG00005019154	SYT11 (ENSEASG00005019151) #12	RIT1 (ENSEASG00005019149) #13	KHDC4 (ENSEASG00005019143) #14	ARHGEF2 (ENSEASG00005019138) #16	SSR2 (ENSEASG00005019136) #17	UBQLN4 (ENSEASG00005019135) #18	LAMTOR2 (ENSEASG00005031172) #19	RAB25 (ENSEASG00005019133) #20	MEX3A (ENSEASG00005031469) #21	LMNA (ENSEASG00005019130) #22	SEMA4A (ENSEASG00005019129) #23	SLC25A44 (ENSEASG00005019128) #25	ENSEASG00005019127 #27	PAQR6 (ENSEASG00005019125) #28	SMG5 (ENSEASG00005019122) #29	TMEM79 (ENSEASG00005019119) #30	GLMP (ENSEASG00005019116) #31	CCT3 (ENSEASG00005019113) #32	TSACC (ENSEASG00005019110) #33	RHBG (ENSEASG00005019109)	MEF2D (ENSEASG00005019100)	IQGAP3 (ENSEASG00005018530)	TTC24 (ENSEASG00005030608)	NAXE (ENSEASG00005030968)	GPATCH4 (ENSEASG00005018284)
Horse	MODERN SPECIES	26	RUSC1 (ENSECAG00000023262)	ASH1L (ENSECAG00000018527)	ENSECAG00000049880	DAP3 (ENSECAG00000016401)	MSTO1 (ENSECAG00000008798)	SYT11 (ENSECAG00000019725) #12	ENSECAG00000019775	RIT1 (ENSECAG00000015714) #13	KHDC4 (ENSECAG00000011569) #14	ARHGEF2 (ENSECAG00000013759) #16	SSR2 (ENSECAG00000013740) #17	UBQLN4 (ENSECAG00000009993) #18	LAMTOR2 (ENSECAG00000009193) #19	RAB25 (ENSECAG00000023191) #20	MEX3A (ENSECAG00000007279) #21	LMNA (ENSECAG00000011097) #22	SEMA4A (ENSECAG00000008622) #23	SLC25A44 (ENSECAG00000007577) #25	ENSECAG00000005938	SMG5 (ENSECAG00000001389) #29	TMEM79 (ENSECAG00000001165) #30	GLMP (ENSECAG00000024928) #31	CCT3 (ENSECAG00000020633) #32	TSACC (ENSECAG00000020624) #33	RHBG (ENSECAG00000013494)	MEF2D (ENSECAG00000020356)	ENSECAG00000053296	IQGAP3 (ENSECAG00000020111)	TTC24 (ENSECAG00000019286)	NAXE (ENSECAG00000013968)	GPATCH4 (ENSECAG00000011135)