Rodentia ANCESTRAL SPECIES 7 ENSGT00940000156244 ENSGT00390000013835 #7 ENSGT00940000157072 #8 ENSGT00530000066485 ENSGT00510000047669 #9 ENSGT00940000156303 #10 ENSGT00940000157646 #12 ENSGT00390000016326 #11 ENSGT00940000153731.a.a #16 ENSGT00950000183129.b.a #18 ENSGT00930000151460 ENSGT00940000158944 #19 ENSGT00940000158207 #20 ENSGT00390000001442 #21 ENSGT00860000135667 ENSGT00940000158907 #22 ENSGT00390000004624.a.a #24 ENSGT00940000153432.B #25 ENSGT00500000044987 #26 ENSGT00390000003050 #27 ENSGT00530000063923.a #28 ENSGT00390000006096.a.b #29 ENSGT00940000160020 #30 ENSGT00940000154668 #31 ENSGT00510000049326.b.b ENSGT00390000010075 ENSGT00940000159987 #34 ENSGT00390000014416 #36 ENSGT00390000011383 #37 ENSGT00390000009130.a.a.b ENSGT00940000158747 Rodentia_B ANCESTRAL SPECIES 4 ENSGT00940000161247 ENSGT00940000156244 ENSGT00390000013835 #7 ENSGT00940000157072 #8 ENSGT00510000047669 #9 ENSGT00940000156303 #10 ENSGT00940000157646 #12 ENSGT00390000016326 #11 ENSGT00940000153731.a.a #16 ENSGT00950000183129.b.a #18 ENSGT00930000151460 ENSGT00940000158944 #19 ENSGT00940000158207 #20 ENSGT00390000001442 #21 ENSGT00860000135667 ENSGT00940000158907 #22 ENSGT00390000004624.a.a #24 ENSGT00940000153432.B #25 ENSGT00500000044987 #26 ENSGT00390000003050 #27 ENSGT00530000063923.a #28 ENSGT00390000006096.a.b #29 ENSGT00940000160020 #30 ENSGT00940000154668 #31 ENSGT00510000049326.b.b ENSGT00390000010075 ENSGT00940000159987 #34 ENSGT00390000014416 #36 ENSGT00390000011383 #37 ENSGT00390000009130.a.a.b ENSGT00940000158747 Myomorpha ANCESTRAL SPECIES 5 ENSGT00940000157724 ENSGT00940000161247 ENSGT00940000156244 ENSGT00390000013835 #7 ENSGT00940000157072 #8 ENSGT00510000047669 #9 ENSGT00940000156303 #10 ENSGT00940000157646 #12 ENSGT00390000016326 #11 ENSGT00940000153731.a.a #16 ENSGT00950000183129.b.a #18 ENSGT00940000158944 #19 ENSGT00940000158207 #20 ENSGT00390000001442 #21 ENSGT00860000135667 ENSGT00940000158907 #22 ENSGT00390000004624.a.a #24 ENSGT00940000153432.B #25 ENSGT00500000044987 #26 ENSGT00390000003050 #27 ENSGT00530000063923.a #28 ENSGT00390000006096.a.b #29 ENSGT00940000160020 #30 ENSGT00940000154668 #31 ENSGT00510000049326.b.b ENSGT00390000010075 ENSGT00940000159987 #34 ENSGT00390000014416 #36 ENSGT00390000011383 #37 ENSGT00390000009130.a.a.b ENSGT00940000158747 Muroidea ANCESTRAL SPECIES 4 ENSGT00940000157724 ENSGT00940000161247 ENSGT00940000156244 ENSGT00390000013835 #7 ENSGT00940000157072 #8 ENSGT00510000047669 #9 ENSGT00940000156303 #10 ENSGT00940000157646 #12 ENSGT00390000016326 #11 ENSGT00940000153731.a.a #16 ENSGT00950000183129.b.a #18 ENSGT00940000158944 #19 ENSGT00940000158207 #20 ENSGT00390000001442 #21 ENSGT00860000135667 ENSGT00940000158907 #22 ENSGT00390000004624.a.a #24 ENSGT00940000153432.B #25 ENSGT00500000044987 #26 ENSGT00390000003050 #27 ENSGT00530000063923.a #28 ENSGT00390000006096.a.b #29 ENSGT00940000160020 #30 ENSGT00940000154668 #31 ENSGT00510000049326.b.b ENSGT00390000010075 ENSGT00940000159987 #34 ENSGT00390000014416 #36 ENSGT00390000011383 #37 ENSGT00390000009130.a.a.b ENSGT00940000158747 Muroidea_A ANCESTRAL SPECIES 11 ENSGT00940000157724 ENSGT00940000161247 ENSGT00940000156244 ENSGT00390000013835 #7 ENSGT00940000157072 #8 ENSGT00510000047669 #9 ENSGT00940000156303 #10 ENSGT00940000157646 #12 ENSGT00390000016326 #11 ENSGT00940000153731.a.a #16 ENSGT00950000183129.b.a #18 ENSGT00940000158944 #19 ENSGT00940000158207 #20 ENSGT00390000001442 #21 ENSGT00860000135667 ENSGT00940000158907 #22 ENSGT00390000004624.a.a #24 ENSGT00940000153432.B #25 ENSGT00500000044987 #26 ENSGT00390000003050 #27 ENSGT00530000063923.a #28 ENSGT00390000006096.a.b #29 ENSGT00940000160020 #30 ENSGT00940000154668 #31 ENSGT00840000130401 #32 ENSGT00730000112355 ENSGT00510000049326.b.b ENSGT00390000010075 ENSGT00940000159987 #34 ENSGT00390000014416 #36 ENSGT00390000011383 #37 Cricetidae ANCESTRAL SPECIES 11 ENSGT00940000157724 ENSGT00940000161247 ENSGT00940000156244 ENSGT00390000013835 #7 ENSGT00940000157072 #8 ENSGT00510000047669 #9 ENSGT00940000156303 #10 ENSGT00940000157646 #12 ENSGT00390000016326 #11 ENSGT00940000153731.a.a #16 ENSGT00950000183129.b.a #18 ENSGT00940000158944 #19 ENSGT00940000158207 #20 ENSGT00390000001442 #21 ENSGT00860000135667 ENSGT00940000158907 #22 ENSGT00390000004624.a.a #24 ENSGT00940000153432.B.r #25 ENSGT00500000044987 #26 ENSGT00390000003050 #27 ENSGT00530000063923.a #28 ENSGT00390000006096.a.b #29 ENSGT00940000160020 #30 ENSGT00940000154668 #31 ENSGT00840000130401 #32 ENSGT00730000112355 ENSGT00510000049326.b.b ENSGT00390000010075 ENSGT00940000159987 #34 ENSGT00390000014416 #36 ENSGT00390000011383 #37 Cricetidae_B ANCESTRAL SPECIES 48 ENSGT00940000154091.a.a ENSGT00940000157724 ENSGT00940000161247 ENSGT00940000156244 ENSGT00390000013835 #7 ENSGT00940000157072 #8 ENSGT00510000047669 #9 ENSGT00940000156303 #10 ENSGT00940000157646 #12 ENSGT00390000016326 #11 ENSGT00940000153731.a.a #16 ENSGT00950000183129.b.a #18 ENSGT00940000158944 #19 ENSGT00940000158207 #20 ENSGT00390000001442 #21 ENSGT00940000158907 #22 ENSGT00390000004624.a.a #24 ENSGT00940000153432.B.r #25 ENSGT00500000044987 #26 ENSGT00390000003050 #27 ENSGT00530000063923.a #28 ENSGT00390000006096.a.b #29 ENSGT00940000160020 #30 ENSGT00940000154668 #31 ENSGT00840000130401 #32 ENSGT00730000112355 Northern American deer mouse MODERN SPECIES 6 Ndufs4 (ENSPEMG00000001791) #7 Fst (ENSPEMG00000000790) #8 Mocs2 (ENSPEMG00000018879) #9 Itga2 (ENSPEMG00000017698) #10 Pelo (ENSPEMG00000015584) #11 Itga1 (ENSPEMG00000013296) #12 ENSPEMG00000009701 #13 ENSPEMG00000025032 #14 ENSPEMG00000013817 #15 Isl1 (ENSPEMG00000019348) #16 ENSPEMG00000019728 #17 Parp8 (ENSPEMG00000019817) #18 Emb (ENSPEMG00000019310) #19 Hcn1 (ENSPEMG00000019487) #20 Mrps30 (ENSPEMG00000019509) #21 Fgf10 (ENSPEMG00000019519) #22 ENSPEMG00000019709 #23 ENSPEMG00000021154 #24 Paip1 (ENSPEMG00000020312) #25 4833420G17Rik (ENSPEMG00000020812) #26 Tmem267 (ENSPEMG00000024315) #27 Ccl28 (ENSPEMG00000020603) #28 Hmgcs1 (ENSPEMG00000020424) #29 Nim1k (ENSPEMG00000024204) #30 Zfp131 (ENSPEMG00000025948) #31 ENSPEMG00000029508 #32 ENSPEMG00000009877 #33 Ghr (ENSPEMG00000006686) #34 ENSPEMG00000025781 #35 Fbxo4 (ENSPEMG00000020075) #36 Rimoc1 (ENSPEMG00000010011) #37 Prairie vole MODERN SPECIES 6 Hspb3 (ENSMOCG00000008919) ENSMOCG00000017721 Arl15 (ENSMOCG00000021567) Ndufs4 (ENSMOCG00000002566) #7 Fst (ENSMOCG00000018211) #8 Mocs2 (ENSMOCG00000000506) #9 Itga2 (ENSMOCG00000007589) #10 Itga1 (ENSMOCG00000011870) #12 Pelo (ENSMOCG00000017554) #11 Isl1 (ENSMOCG00000004124) #16 Parp8 (ENSMOCG00000019443) #18 Emb (ENSMOCG00000000821) #19 ENSMOCG00000012646 #20 ENSMOCG00000017160 #20 Mrps30 (ENSMOCG00000019175) #21 Fgf10 (ENSMOCG00000009474) #22 ENSMOCG00000001432 #24 Paip1 (ENSMOCG00000000834) #25 4833420G17Rik (ENSMOCG00000012223) #26 Tmem267 (ENSMOCG00000000895) #27 Ccl28 (ENSMOCG00000005784) #28 Hmgcs1 (ENSMOCG00000019430) #29 Nim1k (ENSMOCG00000013523) #30 Zfp131 (ENSMOCG00000016567) #31 ENSMOCG00000019632 #32 Cricetinae ANCESTRAL SPECIES 7 ENSGT00940000157724 ENSGT00940000161247 ENSGT00940000156244 ENSGT00390000013835 #7 ENSGT00940000157072 #8 ENSGT00510000047669 #9 ENSGT00940000156303 #10 ENSGT00940000157646 #12 ENSGT00390000016326 #11 ENSGT00940000153731.a.a #16 ENSGT00950000183129.b.a #18 ENSGT00940000158944 #19 ENSGT00940000158207 #20 ENSGT00390000001442 #21 ENSGT00860000135667 ENSGT00940000158907 #22 ENSGT00390000004624.a.a #24 ENSGT00940000153432.B.r #25 ENSGT00500000044987 #26 ENSGT00390000003050 #27 ENSGT00530000063923.a #28 ENSGT00390000006096.a.b #29 ENSGT00940000160020 #30 ENSGT00940000154668 #31 ENSGT00840000130401 #32 ENSGT00510000049326.b.b ENSGT00390000010075 ENSGT00940000159987 #34 ENSGT00390000014416 #36 ENSGT00390000011383 #37 ENSGT00390000009130.a.a.b Chinese hamster chok1gshd MODERN SPECIES 1 Fst (ENSCGRG00001024535) #8 MOCS2 (ENSCGRG00001021273) #9 Itga2 (ENSCGRG00001021951) #10 Itga1 (ENSCGRG00001020614) #12 Pelo (ENSCGRG00001024665) #11 ENSCGRG00001000834 ENSCGRG00001024282 Isl1 (ENSCGRG00001000561) #16 ENSCGRG00001024228 Parp8 (ENSCGRG00001019353) #18 ENSCGRG00001006936 Emb (ENSCGRG00001023682) #19 Hcn1 (ENSCGRG00001024192) #20 ENSCGRG00001006656 Mrps30 (ENSCGRG00001003133) #21 Fgf10 (ENSCGRG00001005274) #22 ENSCGRG00001006400 ENSCGRG00001013480 ENSCGRG00001013713 ENSCGRG00001021827 #24 Paip1 (ENSCGRG00001009535) #25 4833420G17Rik (ENSCGRG00001011989) #26 Tmem267 (ENSCGRG00001003827) #27 Ccl28 (ENSCGRG00001020584) #28 Hmgcs1 (ENSCGRG00001021007) #29 Nim1k (ENSCGRG00001021680) #30 Zfp131 (ENSCGRG00001021210) #31 ENSCGRG00001007226 #32 Ccdc152 (ENSCGRG00001022348) Ghr (ENSCGRG00001019428) #34 Fbxo4 (ENSCGRG00001019798) #36 Golden Hamster MODERN SPECIES 753 Ndufs4 (ENSMAUG00000008411) #7 Fst (ENSMAUG00000008573) #8 ENSMAUG00000008668 Itga2 (ENSMAUG00000008103) #10 ENSMAUG00000009756 #12 Pelo (ENSMAUG00000009770) #11 Isl1 (ENSMAUG00000009787) #16 ENSMAUG00000010697 Parp8 (ENSMAUG00000012024) #18 Emb (ENSMAUG00000010613) #19 Hcn1 (ENSMAUG00000011222) #20 ENSMAUG00000012705 ENSMAUG00000013225 Mrps30 (ENSMAUG00000013462) #21 ENSMAUG00000011648 Fgf10 (ENSMAUG00000012052) #22 ENSMAUG00000013640 #24 Paip1 (ENSMAUG00000014688) #25 4833420G17Rik (ENSMAUG00000000141) #26 Tmem267 (ENSMAUG00000015637) #27 Ccl28 (ENSMAUG00000018511) #28 Hmgcs1 (ENSMAUG00000000052) #29 Nim1k (ENSMAUG00000017026) #30 Zfp131 (ENSMAUG00000000415) #31 Murinae ANCESTRAL SPECIES 24 ENSGT00940000157724 ENSGT00940000161247 ENSGT00940000156244 ENSGT00390000013835 #7 ENSGT00940000157072 #8 ENSGT00510000047669 #9 ENSGT00940000156303 #10 ENSGT00940000157646 #12 ENSGT00390000016326 #11 ENSGT00940000153731.a.a #16 ENSGT00950000183129.b.a #18 ENSGT00940000158944 #19 ENSGT00940000158207 #20 ENSGT00390000001442 #21 ENSGT00860000135667 ENSGT00940000158907 #22 ENSGT00940000153096.b.d.t ENSGT00390000004624.a.a #24 ENSGT00940000153432.B #25 ENSGT00500000044987 #26 ENSGT00390000003050 #27 ENSGT00530000063923.a #28 ENSGT00390000006096.a.b #29 ENSGT00940000160020 #30 ENSGT00940000154668 #31 ENSGT00840000130401 #32 ENSGT00730000112355 ENSGT00510000049326.b.b ENSGT00390000010075 ENSGT00940000159987 #34 ENSGT00390000014416 #36 Mus ANCESTRAL SPECIES 22 ENSGT00940000161247 ENSGT00940000156244 ENSGT00390000013835 #7 ENSGT00940000157072 #8 ENSGT00510000047669 #9 ENSGT00940000156303 #10 ENSGT00940000157646 #12 ENSGT00390000016326 #11 ENSGT00940000153731.a.a #16 ENSGT00950000183129.b.a #18 ENSGT00860000136141 ENSGT00940000158944 #19 ENSGT00940000158207 #20 ENSGT00390000001442 #21 ENSGT00860000135667 ENSGT00940000158907 #22 ENSGT00390000004624.a.a #24 ENSGT00940000153432.B #25 ENSGT00500000044987 #26 ENSGT00390000003050 #27 ENSGT00530000063923.a #28 ENSGT00390000006096.a.b #29 ENSGT00940000160020 #30 ENSGT00940000154668 #31 ENSGT00840000130401.d #32 ENSGT00510000049326.b.b ENSGT00390000010075 ENSGT00940000159987 #34 ENSGT00390000014416 #36 ENSGT00390000011383 #37 ENSGT00390000009130.a.a.b Mus_A ANCESTRAL SPECIES 14 ENSGT00940000161247 ENSGT00940000156244 ENSGT00390000013835 #7 ENSGT00940000157072 #8 ENSGT00510000047669 #9 ENSGT00940000156303 #10 ENSGT00940000157646 #12 ENSGT00390000016326 #11 ENSGT00940000153731.a.a #16 ENSGT00950000183129.b.a #18 ENSGT00860000136141 ENSGT00940000158944 #19 ENSGT00940000158207 #20 ENSGT00390000001442 #21 ENSGT00860000135667 ENSGT00940000158907 #22 ENSGT00390000004624.a.a #24 ENSGT00940000153432.B #25 ENSGT00500000044987 #26 ENSGT00390000003050 #27 ENSGT00530000063923.a #28 ENSGT00390000006096.a.b #29 ENSGT00940000160020 #30 ENSGT00940000154668 #31 ENSGT00840000130401.d #32 Ryukyu mouse MODERN SPECIES 4 Hspb3 (MGP_CAROLIEiJ_G0018908) Arl15 (MGP_CAROLIEiJ_G0018909) Ndufs4 (MGP_CAROLIEiJ_G0018910) #7 Fst (MGP_CAROLIEiJ_G0018911) #8 Mocs2 (MGP_CAROLIEiJ_G0018912) #9 Itga2 (MGP_CAROLIEiJ_G0018913) #10 Itga1 (MGP_CAROLIEiJ_G0018914) #12 Pelo (MGP_CAROLIEiJ_G0018915) #11 Isl1 (MGP_CAROLIEiJ_G0018916) #16 Parp8 (MGP_CAROLIEiJ_G0018917) #18 MGP_CAROLIEiJ_G0018918 Emb (MGP_CAROLIEiJ_G0018919) #19 Hcn1 (MGP_CAROLIEiJ_G0018920) #20 Mrps30 (MGP_CAROLIEiJ_G0018921) #21 MGP_CAROLIEiJ_G0018922 Fgf10 (MGP_CAROLIEiJ_G0018923) #22 MGP_CAROLIEiJ_G0018924 #24 Paip1 (MGP_CAROLIEiJ_G0018925) #25 4833420G17Rik (MGP_CAROLIEiJ_G0018926) #26 MGP_CAROLIEiJ_G0018927 MGP_CAROLIEiJ_G0018928 #27 MGP_CAROLIEiJ_G0018929 #27 Ccl28 (MGP_CAROLIEiJ_G0018930) #28 Hmgcs1 (MGP_CAROLIEiJ_G0018931) #29 Nim1k (MGP_CAROLIEiJ_G0018932) #30 Zfp131 (MGP_CAROLIEiJ_G0018933) #31 MGP_CAROLIEiJ_G0018934 #32 MGP_CAROLIEiJ_G0018935 #32 Mus_B ANCESTRAL SPECIES 13 ENSGT00940000161247 ENSGT00940000156244 ENSGT00390000013835 #7 ENSGT00940000157072 #8 ENSGT00510000047669 #9 ENSGT00940000156303 #10 ENSGT00940000157646 #12 ENSGT00390000016326 #11 ENSGT00940000153731.a.a #16 ENSGT00950000183129.b.a #18 ENSGT00860000136141 ENSGT00940000158944 #19 ENSGT00940000158207 #20 ENSGT00390000001442 #21 ENSGT00860000135667 ENSGT00940000158907 #22 ENSGT00390000004624.a.a #24 ENSGT00940000153432.B #25 ENSGT00500000044987 #26 ENSGT00390000003050 #27 ENSGT00530000063923.a #28 ENSGT00390000006096.a.b #29 ENSGT00940000160020 #30 ENSGT00940000154668 #31 ENSGT00840000130401.d #32 Mus_C ANCESTRAL SPECIES 10 ENSGT00940000161247 ENSGT00940000156244 ENSGT00390000013835 #7 ENSGT00940000157072 #8 ENSGT00510000047669 #9 ENSGT00940000156303 #10 ENSGT00940000157646 #12 ENSGT00390000016326 #11 ENSGT00940000153731.a.a #16 ENSGT00950000183129.b.a #18 ENSGT00860000136141 ENSGT00940000158944 #19 ENSGT00940000158207 #20 ENSGT00390000001442 #21 ENSGT00860000135667 ENSGT00940000158907 #22 ENSGT00390000004624.a.a #24 ENSGT00940000153432.B #25 ENSGT00500000044987 #26 ENSGT00860000136068 ENSGT00390000003050 #27 ENSGT00530000063923.a #28 ENSGT00390000006096.a.b #29 ENSGT00940000160020 #30 ENSGT00940000154668 #31 ENSGT00840000130401.d #32 spretus MODERN SPECIES 4 Arl15 (MGP_SPRETEiJ_G0019787) Ndufs4 (MGP_SPRETEiJ_G0019788) #7 Fst (MGP_SPRETEiJ_G0019789) #8 Mocs2 (MGP_SPRETEiJ_G0019790) #9 Itga2 (MGP_SPRETEiJ_G0019791) #10 MGP_SPRETEiJ_G0019792 #12 Pelo (MGP_SPRETEiJ_G0019793) #11 Isl1 (MGP_SPRETEiJ_G0019794) #16 MGP_SPRETEiJ_G0019795 #18 MGP_SPRETEiJ_G0019796 MGP_SPRETEiJ_G0019797 #19 MGP_SPRETEiJ_G0019798 #19 Hcn1 (MGP_SPRETEiJ_G0019799) #20 Mrps30 (MGP_SPRETEiJ_G0019800) #21 MGP_SPRETEiJ_G0019801 Fgf10 (MGP_SPRETEiJ_G0019802) #22 MGP_SPRETEiJ_G0019803 #24 Paip1 (MGP_SPRETEiJ_G0019804) #25 4833420G17Rik (MGP_SPRETEiJ_G0019805) #26 MGP_SPRETEiJ_G0019806 MGP_SPRETEiJ_G0019807 #27 MGP_SPRETEiJ_G0019808 #27 Hmgcs1 (MGP_SPRETEiJ_G0019809) #29 Nim1k (MGP_SPRETEiJ_G0019810) #30 Zfp131 (MGP_SPRETEiJ_G0019811) #31 MGP_SPRETEiJ_G0019812 #32 Steppe mouse MODERN SPECIES 2898 ENSMSIG00000003357 #20 Mrps30 (ENSMSIG00000003605) #21 ENSMSIG00000003626 Fgf10 (ENSMSIG00000003648) #22 Mouse MODERN SPECIES 4 Snx18 (ENSMUSG00000042364) Hspb3 (ENSMUSG00000051456) Arl15 (ENSMUSG00000042348) Ndufs4 (ENSMUSG00000021764) #7 Fst (ENSMUSG00000021765) #8 Mocs2 (ENSMUSG00000015536) #9 Itga2 (ENSMUSG00000015533) #10 Itga1 (ENSMUSG00000042284) #12 Gm49395 (ENSMUSG00000114470) Pelo (ENSMUSG00000042275) #11 Isl1 (ENSMUSG00000042258) #16 Parp8 (ENSMUSG00000021725) #18 Emb (ENSMUSG00000021728) #19 Hcn1 (ENSMUSG00000021730) #20 Mrps30 (ENSMUSG00000021731) #21 Fgf10 (ENSMUSG00000021732) #22 Nnt (ENSMUSG00000025453) #24 Nnt (ENSMUSG00000116207) #24 Paip1 (ENSMUSG00000025451) #25 4833420G17Rik (ENSMUSG00000062822) #26 Tmem267 (ENSMUSG00000074634) #27 Ccl28 (ENSMUSG00000074715) #28 Hmgcs1 (ENSMUSG00000093930) #29 Nim1k (ENSMUSG00000095930) #30 Zfp131 (ENSMUSG00000094870) #31 AF067063 (ENSMUSG00000094237) #32 D13Ertd608e (ENSMUSG00000095514) #32 Tcstv1 (ENSMUSG00000096284) #32 Gm21761 (ENSMUSG00000096175) #32 B020031M17Rik (ENSMUSG00000078537) #32 Gm36079 (ENSMUSG00000095029) Shrew mouse MODERN SPECIES 2 Hspb3 (MGP_PahariEiJ_G0015978) Arl15 (MGP_PahariEiJ_G0015979) Ndufs4 (MGP_PahariEiJ_G0015980) #7 Fst (MGP_PahariEiJ_G0015981) #8 Mocs2 (MGP_PahariEiJ_G0015982) #9 Itga2 (MGP_PahariEiJ_G0015983) #10 Itga1 (MGP_PahariEiJ_G0015984) #12 Pelo (MGP_PahariEiJ_G0015985) #11 Isl1 (MGP_PahariEiJ_G0015986) #16 Parp8 (MGP_PahariEiJ_G0015987) #18 MGP_PahariEiJ_G0015988 Emb (MGP_PahariEiJ_G0015989) #19 Hcn1 (MGP_PahariEiJ_G0015990) #20 Mrps30 (MGP_PahariEiJ_G0015991) #21 MGP_PahariEiJ_G0015992 Fgf10 (MGP_PahariEiJ_G0015993) #22 MGP_PahariEiJ_G0015994 #24 Paip1 (MGP_PahariEiJ_G0015995) #25 4833420G17Rik (MGP_PahariEiJ_G0015996) #26 MGP_PahariEiJ_G0015997 #27 MGP_PahariEiJ_G0015998 #27 Ccl28 (MGP_PahariEiJ_G0015999) #28 Hmgcs1 (MGP_PahariEiJ_G0016000) #29 Nim1k (MGP_PahariEiJ_G0016001) #30 Zfp131 (MGP_PahariEiJ_G0016002) #31 MGP_PahariEiJ_G0016003 #32 MGP_PahariEiJ_G0016004 #32 MGP_PahariEiJ_G0016005 Ccdc152 (MGP_PahariEiJ_G0016006) Ghr (MGP_PahariEiJ_G0016007) #34 Fbxo4 (MGP_PahariEiJ_G0016008) #36 Rat MODERN SPECIES 11 LOC100359700 (ENSRNOG00000067576) ENSRNOG00000066826 Arl15 (ENSRNOG00000068448) Ndufs4 (ENSRNOG00000011383) #7 Fst (ENSRNOG00000011631) #8 Mocs2 (ENSRNOG00000056325) #9 Itga2 (ENSRNOG00000058111) #10 Itga1 (ENSRNOG00000053550) #12 Pelo (ENSRNOG00000061128) #11 Isl1 (ENSRNOG00000012556) #16 ENSRNOG00000031115 Parp8 (ENSRNOG00000010824) #18 Emb (ENSRNOG00000060329) #19 Hcn1 (ENSRNOG00000055382) #20 Mrps30 (ENSRNOG00000012136) #21 Fgf10 (ENSRNOG00000012278) #22 RGD1561520 (ENSRNOG00000022407) Nnt (ENSRNOG00000026842) #24 Paip1 (ENSRNOG00000058580) #25 C2h5orf34 (ENSRNOG00000017581) #26 Tmem267 (ENSRNOG00000064070) #27 Ccl28 (ENSRNOG00000059640) #28 Hmgcs1 (ENSRNOG00000016552) #29 Nim1k (ENSRNOG00000016353) #30 Zfp131 (ENSRNOG00000015925) #31 AABR07008319.1 (ENSRNOG00000056627) #32 ENSRNOG00000063925 ENSRNOG00000064077 ENSRNOG00000062769 Anxa2rl-ps1 (ENSRNOG00000070775) ENSRNOG00000070222 Upper Galilee mountains blind mole rat MODERN SPECIES 818 Hspb3 (ENSNGAG00000008362) Arl15 (ENSNGAG00000023159) Ndufs4 (ENSNGAG00000018554) #7 Fst (ENSNGAG00000016625) #8 Mocs2 (ENSNGAG00000013661) #9 Itga2 (ENSNGAG00000021941) #10 Pelo (ENSNGAG00000019331) #11 Itga1 (ENSNGAG00000019016) #12 Isl1 (ENSNGAG00000022146) #16 Parp8 (ENSNGAG00000013057) #18 Emb (ENSNGAG00000010465) #19 Hcn1 (ENSNGAG00000016519) #20 Mrps30 (ENSNGAG00000016518) #21 Fgf10 (ENSNGAG00000021554) #22 ENSNGAG00000021202 #24 Paip1 (ENSNGAG00000022919) #25 4833420G17Rik (ENSNGAG00000022468) #26 ENSNGAG00000022126 #27 ENSNGAG00000021934 #27 Lesser Egyptian jerboa MODERN SPECIES 115 Hspb3 (ENSJJAG00000014004) Arl15 (ENSJJAG00000012052) Ndufs4 (ENSJJAG00000013703) #7 Fst (ENSJJAG00000014889) #8 ENSJJAG00000015304 Itga2 (ENSJJAG00000018880) #10 Itga1 (ENSJJAG00000021426) #12 Pelo (ENSJJAG00000015032) #11 Isl1 (ENSJJAG00000016415) #16 ENSJJAG00000017685 #18 ENSJJAG00000016485 #18 Emb (ENSJJAG00000017528) #19 ENSJJAG00000019032 #20 ENSJJAG00000019334 #20 Mrps30 (ENSJJAG00000007272) #21 Fgf10 (ENSJJAG00000007774) #22 ENSJJAG00000009531 #24 ENSJJAG00000011812 #25 4833420G17Rik (ENSJJAG00000001921) #26 Tmem267 (ENSJJAG00000009644) #27 ENSJJAG00000011107 #29 Nim1k (ENSJJAG00000011286) #30 ENSJJAG00000011423 #31 Kangaroo rat MODERN SPECIES 360 Hspb3 (ENSDORG00000003165) Arl15 (ENSDORG00000001836) Ndufs4 (ENSDORG00000002429) #7 Fst (ENSDORG00000002373) #8 Mocs2 (ENSDORG00000001600) #9 Itga2 (ENSDORG00000001595) #10 Itga1 (ENSDORG00000016688) #12 Pelo (ENSDORG00000016689) #11 Isl1 (ENSDORG00000016645) #16 Parp8 (ENSDORG00000012344) #18 ENSDORG00000023309 Emb (ENSDORG00000008346) #19 Hcn1 (ENSDORG00000016126) #20 Mrps30 (ENSDORG00000014828) #21 ENSDORG00000026722 Fgf10 (ENSDORG00000007685) #22 ENSDORG00000009742 #24 Paip1 (ENSDORG00000009739) #25 4833420G17Rik (ENSDORG00000009737) #26 ENSDORG00000027609 #27 ENSDORG00000009736 #27 ENSDORG00000026513 Hmgcs1 (ENSDORG00000001725) #29 Nim1k (ENSDORG00000001716) #30 Zfp131 (ENSDORG00000028178) #31 ENSDORG00000004794 Ccdc152 (ENSDORG00000004793) Ghr (ENSDORG00000008027) #34 ENSDORG00000016321 #36 Rimoc1 (ENSDORG00000016319) #37 ENSDORG00000016318 Rodentia_A ANCESTRAL SPECIES 7 ENSGT00940000157724 ENSGT00940000161247 ENSGT00940000156244 ENSGT00390000013835 #7 ENSGT00940000157072 #8 ENSGT00530000066485 ENSGT00510000047669 #9 ENSGT00940000156303 #10 ENSGT00940000157646 #12 ENSGT00390000016326 #11 ENSGT00940000153731.a.a #16 ENSGT00950000183129.b.a #18 ENSGT00940000158944 #19 ENSGT00940000158207 #20 ENSGT00390000001442 #21 ENSGT00940000158907 #22 ENSGT00390000004624.a.a #24 ENSGT00940000153432.B #25 ENSGT00500000044987 #26 ENSGT00390000003050 #27 ENSGT00530000063923.a #28 ENSGT00390000006096.a.b #29 ENSGT00940000160020 #30 ENSGT00940000154668 #31 ENSGT00510000049326.b.b ENSGT00390000010075 ENSGT00940000159987 #34 ENSGT00390000014416 #36 ENSGT00390000011383 #37 ENSGT00390000009130.a.a.b ENSGT00940000158747 Sciuridae ANCESTRAL SPECIES 32 ENSGT00940000157724 ENSGT00940000161247 ENSGT00940000156244 ENSGT00390000013835 #7 ENSGT00940000157072 #8 ENSGT00530000066485 ENSGT00510000047669 #9 ENSGT00940000156303 #10 ENSGT00940000157646 #12 ENSGT00390000016326 #11 ENSGT00940000153731.a.a #16 ENSGT00950000183129.b.a #18 ENSGT00940000158944 #19 ENSGT00940000158207 #20 ENSGT00390000001442 #21 ENSGT00940000158907 #22 ENSGT00390000004624.a.a #24 ENSGT00940000153432.B #25 ENSGT00500000044987 #26 ENSGT00390000003050 #27 ENSGT00530000063923.a #28 ENSGT00390000006096.a.b #29 ENSGT00940000160020 #30 ENSGT00940000154668 #31 ENSGT00390000009290 ENSGT00510000049326.b.b ENSGT00390000010075 ENSGT00940000159987 #34 ENSGT00390000014416 #36 ENSGT00390000011383 #37 ENSGT00390000009130.a.a.b Marmotini ANCESTRAL SPECIES 54 ENSGT00940000161247 ENSGT00940000156244 ENSGT00390000013835 #7 ENSGT00940000157072 #8 ENSGT00530000066485 ENSGT00510000047669 #9 ENSGT00940000156303 #10 ENSGT00940000157646 #12 ENSGT00390000016326 #11 ENSGT00940000153731.a.a #16 ENSGT00950000183129.b.a #18 ENSGT00940000158944 #19 ENSGT00940000154175.i.b.f ENSGT00940000158207 #20 ENSGT00390000001442 #21 ENSGT00940000158907 #22 ENSGT00390000004624.a.a #24 ENSGT00940000153432.B #25 ENSGT00500000044987 #26 ENSGT00390000003050 #27 ENSGT00530000063923.a #28 ENSGT00390000006096.a.b #29 ENSGT00940000160020 #30 ENSGT00940000154668.bb.a #31 ENSGT00390000018047 ENSGT00940000160746 ENSGT00940000155469 ENSGT00940000154690.mb.a.a ENSGT00730000111450 ENSGT00940000157512 Alpin marmot MODERN SPECIES 46 NDUFS4 (ENSMMMG00000009503) #7 FST (ENSMMMG00000009517) #8 ENSMMMG00000009548 MOCS2 (ENSMMMG00000009556) #9 ITGA2 (ENSMMMG00000009586) #10 ITGA1 (ENSMMMG00000009646) #12 PELO (ENSMMMG00000009680) #11 ISL1 (ENSMMMG00000009692) #16 ENSMMMG00000009728 PARP8 (ENSMMMG00000009741) #18 EMB (ENSMMMG00000009831) #19 ENSMMMG00000009859 HCN1 (ENSMMMG00000009894) #20 ENSMMMG00000009946 MRPS30 (ENSMMMG00000009959) #21 FGF10 (ENSMMMG00000010011) #22 NNT (ENSMMMG00000010081) #24 PAIP1 (ENSMMMG00000010312) #25 C5orf34 (ENSMMMG00000010361) #26 ENSMMMG00000010422 #27 CCL28 (ENSMMMG00000010424) #28 HMGCS1 (ENSMMMG00000010439) #29 NIM1K (ENSMMMG00000010469) #30 ENSMMMG00000010474 ENSMMMG00000010479 #31 ENSMMMG00000010561 ZNF622 (ENSMMMG00000010567) RETREG1 (ENSMMMG00000010577) MYO10 (ENSMMMG00000010627) ENSMMMG00000010697 ENSMMMG00000010704 Marmotini_b ANCESTRAL SPECIES 55 ENSGT00940000161247 ENSGT00940000156244 ENSGT00390000013835 #7 ENSGT00940000157072 #8 ENSGT00530000066485 ENSGT00510000047669 #9 ENSGT00940000156303 #10 ENSGT00940000157646 #12 ENSGT00390000016326 #11 ENSGT00940000153731.a.a #16 ENSGT00950000183129.b.a #18 ENSGT00940000158944 #19 ENSGT00940000154175.i.b.f ENSGT00940000158207 #20 ENSGT00390000001442 #21 ENSGT00940000158907 #22 ENSGT00390000004624.a.a #24 ENSGT00940000153432.B #25 ENSGT00500000044987 #26 ENSGT00390000003050 #27 ENSGT00530000063923.a #28 ENSGT00390000006096.a.b #29 ENSGT00940000160020 #30 ENSGT00940000154668.bb.a #31 ENSGT00390000018047 ENSGT00940000160746 ENSGT00940000155469 ENSGT00940000154690.mb.a.a ENSGT00730000111450 ENSGT00940000157512 Arctic ground squirrel MODERN SPECIES 122 MRPS30 (ENSUPAG00010003675) #21 FGF10 (ENSUPAG00010003651) #22 ENSUPAG00010003643 NNT (ENSUPAG00010003597) #24 C5orf34 (ENSUPAG00010003541) #26 TMEM267 (ENSUPAG00010003538) #27 CCL28 (ENSUPAG00010003526) #28 HMGCS1 (ENSUPAG00010003286) #29 NIM1K (ENSUPAG00010003276) #30 ZNF131 (ENSUPAG00010003204) #31 ZNF622 (ENSUPAG00010003200) RETREG1 (ENSUPAG00010003159) MYO10 (ENSUPAG00010003073) ENSUPAG00010003068 BASP1 (ENSUPAG00010003065) CDH18 (ENSUPAG00010003003) Squirrel MODERN SPECIES 80 ENSSTOG00000033600 NDUFS4 (ENSSTOG00000005327) #7 FST (ENSSTOG00000013273) #8 ENSSTOG00000030819 ENSSTOG00000010607 #9 ITGA2 (ENSSTOG00000010586) #10 ITGA1 (ENSSTOG00000010565) #12 PELO (ENSSTOG00000027378) #11 ISL1 (ENSSTOG00000013320) #16 ENSSTOG00000022960 PARP8 (ENSSTOG00000006572) #18 EMB (ENSSTOG00000026143) #19 ENSSTOG00000034900 HCN1 (ENSSTOG00000008842) #20 MRPS30 (ENSSTOG00000015844) #21 FGF10 (ENSSTOG00000023167) #22 NNT (ENSSTOG00000011209) #24 PAIP1 (ENSSTOG00000011203) #25 C5orf34 (ENSSTOG00000011197) #26 ENSSTOG00000016333 #27 CCL28 (ENSSTOG00000005720) #28 HMGCS1 (ENSSTOG00000005698) #29 NIM1K (ENSSTOG00000025018) #30 ZNF131 (ENSSTOG00000015383) #31 ZNF622 (ENSSTOG00000000623) RETREG1 (ENSSTOG00000024173) MYO10 (ENSSTOG00000004826) ENSSTOG00000024457 CDH18 (ENSSTOG00000012038) Eurasian red squirrel MODERN SPECIES 15 ENSSVLG00005008898 ENSSVLG00005008918 #7 FST (ENSSVLG00005008975) #8 MOCS2 (ENSSVLG00005009062) #9 ITGA2 (ENSSVLG00005009124) #10 ITGA1 (ENSSVLG00005009298) #12 PELO (ENSSVLG00005009325) #11 ENSSVLG00005009354 ENSSVLG00005009370 ISL1 (ENSSVLG00005009398) #16 PARP8 (ENSSVLG00005009527) #18 EMB (ENSSVLG00005010153) #19 ENSSVLG00005010286 HCN1 (ENSSVLG00005010333) #20 MRPS30 (ENSSVLG00005010453) #21 FGF10 (ENSSVLG00005010487) #22 NNT (ENSSVLG00005010535) #24 ENSSVLG00005010623 #25 C5orf34 (ENSSVLG00005010862) #26 TMEM267 (ENSSVLG00005010958) #27 CCL28 (ENSSVLG00005010999) #28 ENSSVLG00005011087 #29 NIM1K (ENSSVLG00005011195) #30 ZNF131 (ENSSVLG00005011245) #31 ENSSVLG00005004195 ENSSVLG00005004202 ENSSVLG00005004212 ENSSVLG00005004229 ENSSVLG00005004232 ENSSVLG00005004240 CCDC152 (ENSSVLG00005004279) Hystricomorpha ANCESTRAL SPECIES 31 ENSGT00940000157724 ENSGT00940000161247 ENSGT00940000156244 ENSGT00390000013835 #7 ENSGT00940000157072 #8 ENSGT00530000066485 ENSGT00510000047669 #9 ENSGT00940000156303 #10 ENSGT00940000157646 #12 ENSGT00390000016326 #11 ENSGT00940000153731.a.a #16 ENSGT00950000183129.b.a #18 ENSGT00940000158944 #19 ENSGT00940000158207 #20 ENSGT00390000001442 #21 ENSGT00940000158907 #22 ENSGT00390000004624.a.a #24 ENSGT00940000153432.B #25 ENSGT00500000044987 #26 ENSGT00390000003050 #27 ENSGT00530000063923.a #28 ENSGT00390000006096.a.b #29 ENSGT00940000160020 #30 ENSGT00940000154668 #31 ENSGT00510000049326.b.b ENSGT00390000010075 ENSGT00940000159987 #34 ENSGT00390000014416 #36 ENSGT00390000011383 #37 ENSGT00390000009130.a.a.b ENSGT00940000158747 Naked mole-rat female MODERN SPECIES 7 ENSHGLG00000039934 ENSHGLG00000042146 ISL1 (ENSHGLG00000008042) #16 ENSHGLG00000006369 #18 ENSHGLG00000040347 ENSHGLG00000033962 ENSHGLG00000006419 #19 ENSHGLG00000020384 ENSHGLG00000033727 ENSHGLG00000038081 #20 ENSHGLG00000020276 ENSHGLG00000043987 ENSHGLG00000034117 ##17 ENSHGLG00000032152 ENSHGLG00000047502 #21 FGF10 (ENSHGLG00000050919) #22 ENSHGLG00000020569 NNT (ENSHGLG00000009267) #24 ENSHGLG00000041248 PAIP1 (ENSHGLG00000010516) #25 C5orf34 (ENSHGLG00000011848) #26 TMEM267 (ENSHGLG00000047128) #27 CCL28 (ENSHGLG00000048954) #28 ENSHGLG00000041075 ENSHGLG00000003333 #29 NIM1 (ENSHGLG00000041036) #30 ENSHGLG00000003740 #31 ENSHGLG00000036462 ENSHGLG00000004582 ENSHGLG00000002792 ENSHGLG00000047645 Hystricomorpha_a ANCESTRAL SPECIES 29 ENSGT00940000157724 ENSGT00940000161247 ENSGT00940000156244 ENSGT00390000013835 #7 ENSGT00940000157072 #8 ENSGT00530000066485 ENSGT00510000047669 #9 ENSGT00940000156303 #10 ENSGT00940000157646 #12 ENSGT00390000016326 #11 ENSGT00940000153731.a.a #16 ENSGT00950000183129.b.a #18 ENSGT00940000158944 #19 ENSGT00940000158207 #20 ENSGT00390000001442 #21 ENSGT00940000158907 #22 ENSGT00390000004624.a.a #24 ENSGT00940000153432.B #25 ENSGT00500000044987 #26 ENSGT00390000003050 #27 ENSGT00530000063923.a #28 ENSGT00390000006096.a.b #29 ENSGT00940000160020 #30 ENSGT00940000154668 #31 ENSGT00510000049326.b.b ENSGT00390000010075 ENSGT00940000159987 #34 ENSGT00390000014416 #36 ENSGT00390000011383 #37 ENSGT00390000009130.a.a.b ENSGT00940000158747 Guinea pig MODERN SPECIES 29 ESM1 (ENSCPOG00000032085) SNX18 (ENSCPOG00000031271) HSPB3 (ENSCPOG00000004246) ARL15 (ENSCPOG00000020833) ENSCPOG00000034374 #7 FST (ENSCPOG00000000969) #8 MOCS2 (ENSCPOG00000015752) #9 ITGA2 (ENSCPOG00000015751) #10 ITGA1 (ENSCPOG00000013675) #12 PELO (ENSCPOG00000027406) #11 ISL1 (ENSCPOG00000005782) #16 PARP8 (ENSCPOG00000013957) #18 EMB (ENSCPOG00000019838) #19 HCN1 (ENSCPOG00000014131) #20 MRPS30 (ENSCPOG00000002067) #21 FGF10 (ENSCPOG00000032932) #22 NNT (ENSCPOG00000002255) #24 ENSCPOG00000002525 #25 C5orf34 (ENSCPOG00000015360) #26 TMEM267 (ENSCPOG00000001894) #27 HMGCS1 (ENSCPOG00000007115) #29 NIM1K (ENSCPOG00000019426) #30 ZNF131 (ENSCPOG00000033475) #31 ENSCPOG00000030497 CCDC152 (ENSCPOG00000002761) GHR (ENSCPOG00000035401) #34 FBXO4 (ENSCPOG00000033716) #36 RIMOC1 (ENSCPOG00000031496) #37 OXCT1 (ENSCPOG00000012966) PLCXD3 (ENSCPOG00000007095) C6 (ENSCPOG00000030163) Hystricomorpha_b ANCESTRAL SPECIES 68 ENSGT00940000157724 ENSGT00940000161247 ENSGT00940000156244 ENSGT00390000013835 #7 ENSGT00940000157072 #8 ENSGT00530000066485 ENSGT00510000047669 #9 ENSGT00940000156303 #10 ENSGT00940000157646 #12 ENSGT00390000016326 #11 ENSGT00940000153731.a.a #16 ENSGT00950000183129.b.a #18 ENSGT00940000158944 #19 ENSGT00940000158207 #20 ENSGT00390000001442 #21 ENSGT00940000158907 #22 ENSGT00390000004624.a.a #24 ENSGT00940000153432.B #25 ENSGT00500000044987 #26 ENSGT00390000003050 #27 ENSGT00530000063923.a #28 ENSGT00390000006096.a.b #29 ENSGT00940000160020 #30 ENSGT00940000154668 #31 Long-tailed chinchilla MODERN SPECIES 153 SNX18 (ENSCLAG00000005795) HSPB3 (ENSCLAG00000017635) ARL15 (ENSCLAG00000005872) NDUFS4 (ENSCLAG00000006010) #7 FST (ENSCLAG00000006300) #8 ENSCLAG00000003525 MOCS2 (ENSCLAG00000003598) #9 ITGA2 (ENSCLAG00000003990) #10 ITGA1 (ENSCLAG00000004284) #12 PELO (ENSCLAG00000005043) #11 ISL1 (ENSCLAG00000005237) #16 PARP8 (ENSCLAG00000006360) #18 EMB (ENSCLAG00000007007) #19 HCN1 (ENSCLAG00000007218) #20 MRPS30 (ENSCLAG00000007412) #21 FGF10 (ENSCLAG00000008337) #22 NNT (ENSCLAG00000007011) #24 PAIP1 (ENSCLAG00000009167) #25 C5orf34 (ENSCLAG00000007586) #26 TMEM267 (ENSCLAG00000007961) #27 CCL28 (ENSCLAG00000008222) #28 HMGCS1 (ENSCLAG00000017108) #29 NIM1K (ENSCLAG00000016609) #30 ZNF131 (ENSCLAG00000016740) #31 Degu MODERN SPECIES 340 FGF10 (ENSODEG00000000256) #22 ENSODEG00000000371 NNT (ENSODEG00000000412) #24 ENSODEG00000000445 #25 C5orf34 (ENSODEG00000000459) #26 ENSODEG00000018556 TMEM267 (ENSODEG00000000507) #27 CCL28 (ENSODEG00000000524) #28 HMGCS1 (ENSODEG00000000555) #29 NIM1K (ENSODEG00000000571) #30 ENSODEG00000000660 ZNF131 (ENSODEG00000000696) #31 ENSODEG00000000715 ENSODEG00000000722