Euarchontoglires	ANCESTRAL SPECIES	7	ENSGT01030000234626.B #7	ENSGT00550000074878 #8	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT01030000234985	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00940000157912 #27	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956	ENSGT00400000024673	ENSGT00640000091563.a #34	ENSGT00390000007441 #33	ENSGT01030000234667.b #32	ENSGT00990000203619.A.b.b.a	ENSGT00530000063927.a.a	ENSGT00940000162752	ENSGT00530000063359.A
Euarchontoglires_A	ANCESTRAL SPECIES	6	ENSGT01030000234626.B #7	ENSGT00550000074878 #8	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT01030000234985	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00940000157912 #27	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956	ENSGT00400000024673	ENSGT00640000091563.a #34	ENSGT00390000007441 #33	ENSGT01030000234667.b #32	ENSGT00990000203619.A.b.b.a	ENSGT00530000063927.a.a	ENSGT00940000162752	ENSGT00530000063359.A
Glires	ANCESTRAL SPECIES	5	ENSGT01030000234626.B #7	ENSGT00550000074878 #8	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT01030000234985	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00940000157912 #27	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956	ENSGT00400000024673	ENSGT00640000091563.a #34	ENSGT00390000007441 #33	ENSGT01030000234667.b #32	ENSGT00990000203619.A.b.b.a	ENSGT00530000063927.a.a	ENSGT00940000162752	ENSGT00530000063359.A
Rodentia	ANCESTRAL SPECIES	6	ENSGT01030000234626.B #7	ENSGT00550000074878 #8	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT01030000234985	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00940000157912 #27	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956	ENSGT00400000024673	ENSGT00640000091563.a #34	ENSGT00390000007441 #33	ENSGT01030000234667.b #32	ENSGT00990000203619.A.b.b.a	ENSGT00530000063927.a.a	ENSGT00940000162752	ENSGT00530000063359.A
Rodentia_B	ANCESTRAL SPECIES	18	ENSGT01030000234626.B #7	ENSGT00550000074878 #8	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT01030000234985	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00940000157912 #27	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956	ENSGT00400000024673	ENSGT00640000091563.a #34	ENSGT00390000007441 #33	ENSGT01030000234667.b #32	ENSGT00990000203619.A.b.b.a	ENSGT00530000063927.a.a	ENSGT00940000162752	ENSGT00530000063359.A
Myomorpha	ANCESTRAL SPECIES	21	ENSGT01030000234626.B #7	ENSGT00550000074878 #8	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT01030000234985	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00940000157912 #27	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956	ENSGT00400000024673	ENSGT00640000091563.a #34	ENSGT00390000007441 #33	ENSGT01030000234667.b #32	ENSGT00990000203619.A.b.b.a	ENSGT00530000063927.a.a	ENSGT00940000162752	ENSGT00530000063359.A
Muroidea	ANCESTRAL SPECIES	22	ENSGT01030000234626.B #7	ENSGT00550000074878 #8	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT01030000234985	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00940000157912 #27	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956	ENSGT00400000024673	ENSGT00640000091563.a #34	ENSGT00390000007441 #33	ENSGT01030000234667.b #32	ENSGT00990000203619.A.b.b.a	ENSGT00530000063927.a.a	ENSGT00940000162752	ENSGT00530000063359.A
Muroidea_A	ANCESTRAL SPECIES	11	ENSGT01030000234626.B #7	ENSGT00550000074878 #8	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT01030000234985	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00940000153773.a.a.b.e.b #23	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00940000157912 #27	ENSGT00690000103860 #28	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988.r ##31	ENSGT01030000234667.b #32	ENSGT00390000007441 #33	ENSGT00640000091563.a #34	ENSGT00400000024673	ENSGT00940000159956	ENSGT00990000203619.A.b.b.a	ENSGT00530000063927.a.a
Murinae	ANCESTRAL SPECIES	29	ENSGT01030000234626.B #7	ENSGT00550000074878 #8	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT01030000234985	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00940000153773.a.a.b.e.b #23	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00940000157912 #27	ENSGT00690000103860 #28	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988.q.b #31	ENSGT01030000234667.b #32	ENSGT00390000007441 #33	ENSGT00640000091563.a #34	ENSGT00400000024673	ENSGT00940000159956	ENSGT00990000203619.A.b.b.a	ENSGT00530000063927.a.a
Mus	ANCESTRAL SPECIES	21	ENSGT01030000234626.B #7	ENSGT00550000074878 #8	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT01030000234985	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00940000153773.a.a.b.e.b #23	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00940000157912 #27	ENSGT00690000103860 #28	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988.q.b #31	ENSGT01030000234667.b #32	ENSGT00390000007441 #33	ENSGT00640000091563.a #34	ENSGT00400000024673	ENSGT00940000159956	ENSGT00990000203619.A.b.b.a	ENSGT00530000063927.a.a
Mus_A	ANCESTRAL SPECIES	10	ENSGT01030000234626.B #7	ENSGT00550000074878 #8	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT01030000234985	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00940000153773.a.a.b.e.b #23	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00940000157912 #27	ENSGT00690000103860 #28	ENSGT00390000002164 #29	ENSGT00390000018525.a.a.j #30	ENSGT00510000046988.q.b #31	ENSGT01030000234667.b #32	ENSGT00390000007441 #33	ENSGT00640000091563.a #34	ENSGT00400000024673	ENSGT00940000159956	ENSGT00990000203619.A.b.b.a	ENSGT00530000063927.a.a
Mus_B	ANCESTRAL SPECIES	9	ENSGT00550000074878 #8	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000162065.c.a #14	ENSGT00940000162065.d ##14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT01030000234985	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00940000153773.a.a.b.e.b #23	ENSGT00700000105447.b.a #24	ENSGT00940000154721.db.a	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00940000157912 #27	ENSGT00690000103860 #28	ENSGT00390000002164 #29	ENSGT00390000018525.a.a.j #30	ENSGT00510000046988.q.b.b.a #31	ENSGT01030000234667.b #32	ENSGT00390000007441 #33	ENSGT00640000091563.a #34	ENSGT00400000024673	ENSGT00940000159956
Mouse	MODERN SPECIES	8	Acat3 (ENSMUSG00000062480) #7	Tcp1 (ENSMUSG00000068039) #8	Mrpl18 (ENSMUSG00000057388) #9	Pnldc1 (ENSMUSG00000073460) #10	Mrgprh (ENSMUSG00000059408) #11	Mas1 (ENSMUSG00000068037) #12	Igf2r (ENSMUSG00000023830) #13	Slc22a1 (ENSMUSG00000023829) #14	Slc22a2 (ENSMUSG00000040966) #15	Slc22a3 (ENSMUSG00000023828) #16	Plg (ENSMUSG00000059481) #17	Map3k4 (ENSMUSG00000014426) #18	Agpat4 (ENSMUSG00000023827) #19	Prkn (ENSMUSG00000023826) #20	Pacrg (ENSMUSG00000037196) #21	Qki (ENSMUSG00000062078) #22	Pabpc6 (ENSMUSG00000046173) #23	Gm17728 (ENSMUSG00000072968) #24	1700010I14Rik (ENSMUSG00000023873) #25	Pde10a (ENSMUSG00000023868) #26	T (ENSMUSG00000062327) #27	T2 (ENSMUSG00000058159) #28	Prr18 (ENSMUSG00000055945) #29	Sft2d1 (ENSMUSG00000073468) #30	Mpc1 (ENSMUSG00000023861) #31	Ccr6 (ENSMUSG00000040899) #32	Cep43 (ENSMUSG00000069135) #33	Rnaset2a (ENSMUSG00000095687) #34	Rsph3a (ENSMUSG00000073471) #35	Tagap (ENSMUSG00000033450) #36	Fndc1 (ENSMUSG00000071984) #37
Mus_C	ANCESTRAL SPECIES	35	ENSGT00550000074878 #8	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000162065.c.a #14	ENSGT00940000162065.d ##14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT01030000234985	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00940000153773.a.a.b.e.b #23	ENSGT00700000105447.b.a #24	ENSGT00940000154721.db.a	ENSGT00390000009877 #25	ENSGT00940000156543 #26
spretus	MODERN SPECIES	8	Acat3 (MGP_SPRETEiJ_G0021978) #7	Tcp1 (MGP_SPRETEiJ_G0021977) #8	Mrpl18 (MGP_SPRETEiJ_G0021976) #9	Pnldc1 (MGP_SPRETEiJ_G0021975) #10	Mrgprh (MGP_SPRETEiJ_G0021974) #11	Mas1 (MGP_SPRETEiJ_G0021973) #11	Igf2r (MGP_SPRETEiJ_G0021972) #13	Slc22a1 (MGP_SPRETEiJ_G0021971) ##14	Slc22a2 (MGP_SPRETEiJ_G0021970) #15	Slc22a3 (MGP_SPRETEiJ_G0021969) #16	Plg (MGP_SPRETEiJ_G0021968) #17	Map3k4 (MGP_SPRETEiJ_G0021967) #18	Agpat4 (MGP_SPRETEiJ_G0021966) #19	Prkn (MGP_SPRETEiJ_G0021965) #20	Pacrg (MGP_SPRETEiJ_G0021964) #21	Qki (MGP_SPRETEiJ_G0021963) #22	Pabpc6 (MGP_SPRETEiJ_G0021962) #23	Gm17728 (MGP_SPRETEiJ_G0021961) #24	MGP_SPRETEiJ_G0021960	MGP_SPRETEiJ_G0021959	T (MGP_SPRETEiJ_G0021958) #27	Prr18 (MGP_SPRETEiJ_G0021957) #29	MGP_SPRETEiJ_G0021956 ##30	Sft2d1 (MGP_SPRETEiJ_G0021955) #30	MGP_SPRETEiJ_G0021954 ##31	Ccr6 (MGP_SPRETEiJ_G0021953) #32	Cep43 (MGP_SPRETEiJ_G0021952) #33	MGP_SPRETEiJ_G0021951 #34	MGP_SPRETEiJ_G0021950 #34	MGP_SPRETEiJ_G0021949	MGP_SPRETEiJ_G0021948
Steppe mouse	MODERN SPECIES	3148														ENSMSIG00000014271 #20	Pacrg (ENSMSIG00000014249) #21	Qki (ENSMSIG00000014232) #22	Pabpc6 (ENSMSIG00000014218) #23	Gm17728 (ENSMSIG00000014212) #24	Ppihl (ENSMSIG00000014204)	1700010I14Rik (ENSMSIG00000014152) #25	Pde10a (ENSMSIG00000013595) #26
Ryukyu mouse	MODERN SPECIES	8	MGP_CAROLIEiJ_G0021042 #7	Tcp1 (MGP_CAROLIEiJ_G0021043) #8	Mrpl18 (MGP_CAROLIEiJ_G0021044) #9	Pnldc1 (MGP_CAROLIEiJ_G0021045) #10	Mrgprh (MGP_CAROLIEiJ_G0021046) #11	Mas1 (MGP_CAROLIEiJ_G0021047) #11	MGP_CAROLIEiJ_G0021048	Slc22a1 (MGP_CAROLIEiJ_G0021049) #14	Slc22a2 (MGP_CAROLIEiJ_G0021050) #15	Slc22a3 (MGP_CAROLIEiJ_G0021051) #16	Plg (MGP_CAROLIEiJ_G0021052) #17	Map3k4 (MGP_CAROLIEiJ_G0021053) #18	Agpat4 (MGP_CAROLIEiJ_G0021054) #19	Prkn (MGP_CAROLIEiJ_G0021055) #20	Pacrg (MGP_CAROLIEiJ_G0021056) #21	Qki (MGP_CAROLIEiJ_G0021057) #22	Pabpc6 (MGP_CAROLIEiJ_G0021058) #23	1700010I14Rik (MGP_CAROLIEiJ_G0021059) #25	Pde10a (MGP_CAROLIEiJ_G0021060) #26	T (MGP_CAROLIEiJ_G0021061) #27	Sft2d1 (MGP_CAROLIEiJ_G0021062) #30	Prr18 (MGP_CAROLIEiJ_G0021063) #29	MGP_CAROLIEiJ_G0021064 ##30	MGP_CAROLIEiJ_G0021065 #31	Ccr6 (MGP_CAROLIEiJ_G0021066) #32	Cep43 (MGP_CAROLIEiJ_G0021067) #33	MGP_CAROLIEiJ_G0021068 #34	MGP_CAROLIEiJ_G0021069 #34	Rps6ka2 (MGP_CAROLIEiJ_G0021070)	Gpr31b (MGP_CAROLIEiJ_G0021071)	MGP_CAROLIEiJ_G0021072
Shrew mouse	MODERN SPECIES	13	MGP_PahariEiJ_G0023358 #7	Tcp1 (MGP_PahariEiJ_G0023359) #8	Mrpl18 (MGP_PahariEiJ_G0023360) #9	Pnldc1 (MGP_PahariEiJ_G0023361) #10	Mrgprh (MGP_PahariEiJ_G0023362) #11	Mas1 (MGP_PahariEiJ_G0023363) #11	Igf2r (MGP_PahariEiJ_G0023364) #13	Slc22a1 (MGP_PahariEiJ_G0023365) #14	Slc22a2 (MGP_PahariEiJ_G0023366) #15	Slc22a3 (MGP_PahariEiJ_G0023367) #16	Plg (MGP_PahariEiJ_G0023368) #17	Map3k4 (MGP_PahariEiJ_G0023369) #18	Agpat4 (MGP_PahariEiJ_G0023370) #19	Prkn (MGP_PahariEiJ_G0023371) #20	Pacrg (MGP_PahariEiJ_G0023372) #21	Qki (MGP_PahariEiJ_G0023373) #22	MGP_PahariEiJ_G0023374 #23	MGP_PahariEiJ_G0023375 #25	Pde10a (MGP_PahariEiJ_G0023376) #26	MGP_PahariEiJ_G0023377	T (MGP_PahariEiJ_G0023378) #27	MGP_PahariEiJ_G0023379 #30	Prr18 (MGP_PahariEiJ_G0023380) #29	MGP_PahariEiJ_G0023381 #30	MGP_PahariEiJ_G0023382 #31	Ccr6 (MGP_PahariEiJ_G0023383) #32	Cep43 (MGP_PahariEiJ_G0023384) #33	MGP_PahariEiJ_G0023385 #34	MGP_PahariEiJ_G0023386 #34	MGP_PahariEiJ_G0023387	MGP_PahariEiJ_G0023388
Rat	MODERN SPECIES		ENSRNOG00000069754	Tcp1 (ENSRNOG00000014160) #8	Mrpl18 (ENSRNOG00000014582) #9	Pnldc1 (ENSRNOG00000023140) #10	Mas1 (ENSRNOG00000014971) #11	Igf2r (ENSRNOG00000014997) #13	Slc22a1 (ENSRNOG00000016337) #14	Slc22a2 (ENSRNOG00000016625) #15	Slc22a3 (ENSRNOG00000022946) #16	Plg (ENSRNOG00000017223) #17	AABR07001512.1 (ENSRNOG00000017412)	Map3k4 (ENSRNOG00000017419) #18	Agpat4 (ENSRNOG00000017731) #19	Prkn (ENSRNOG00000055547) #20	Pacrg (ENSRNOG00000068261) #21	Qki (ENSRNOG00000048297) #22	Pabpc6 (ENSRNOG00000017367) #23	MGC94891 (ENSRNOG00000011243) #25	Pde10a (ENSRNOG00000011310) #26	Tbxt (ENSRNOG00000012229) #27	T2 (ENSRNOG00000024172) #28	ENSRNOG00000066810	Prr18 (ENSRNOG00000070586) #29	Sft2d1 (ENSRNOG00000024140) #30	Mpc1 (ENSRNOG00000012415) #31	Ccr6 (ENSRNOG00000012964) #32	Cep43 (ENSRNOG00000055093) #33	Rnaset2 (ENSRNOG00000013190) #34	Rps6ka2 (ENSRNOG00000013194)	Tcp10b (ENSRNOG00000013374)	Ttll2 (ENSRNOG00000033901)
Cricetidae	ANCESTRAL SPECIES	11	ENSGT01030000234626.B #7	ENSGT00550000074878 #8	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208 #17	ENSGT01030000234985	ENSGT00880000138034 #18	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00940000153773.a.a.b.e.b #23	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00940000157912 #27	ENSGT00690000103860 #28	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988.r ##31	ENSGT01030000234667.b #32	ENSGT00390000007441 #33	ENSGT00640000091563.a #34	ENSGT00400000024673	ENSGT00940000159956	ENSGT00990000203619.A.b.b.a	ENSGT00530000063927.a.a
Cricetidae_B	ANCESTRAL SPECIES	21	ENSGT01030000234626.B #7	ENSGT00550000074878 #8	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT01030000234985	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00940000153773.a.a.b.e.b #23	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00940000157912 #27	ENSGT00690000103860 #28	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988.r ##31	ENSGT01030000234667.b #32	ENSGT00640000091563.a #34	ENSGT00940000159956	ENSGT00990000203619.A.b.b.a	ENSGT00530000063927.a.a	ENSGT00940000162752	ENSGT00530000063359.A
Northern American deer mouse	MODERN SPECIES	7	Mrpl18 (ENSPEMG00000016836) #9	Pnldc1 (ENSPEMG00000016301) #10	Mas1 (ENSPEMG00000014302) #11	Igf2r (ENSPEMG00000016189) #13	Slc22a1 (ENSPEMG00000013645) #14	Slc22a2 (ENSPEMG00000009409) #15	Slc22a3 (ENSPEMG00000001370) #16	Plg (ENSPEMG00000006099) #17	Map3k4 (ENSPEMG00000011456) #18	ENSPEMG00000007201	Agpat4 (ENSPEMG00000000276) #19	Prkn (ENSPEMG00000013734) #20	ENSPEMG00000028613	ENSPEMG00000025332	Pacrg (ENSPEMG00000008420) #21	Qki (ENSPEMG00000007765) #22	Pabpc6 (ENSPEMG00000028235) #23	1700010I14Rik (ENSPEMG00000009028) #25	Pde10a (ENSPEMG00000013375) #26	T (ENSPEMG00000015655) #27	ENSPEMG00000027563 #28	Prr18 (ENSPEMG00000014412) #29	ENSPEMG00000017376 #30	ENSPEMG00000018400 ##31	ENSPEMG00000011035 #34	Rps6ka2 (ENSPEMG00000008858)	Gpr31b (ENSPEMG00000029005)	ENSPEMG00000006421	Ttll2 (ENSPEMG00000012262)	ENSPEMG00000017052	Afdn (ENSPEMG00000009605)
Prairie vole	MODERN SPECIES	358	ENSMOCG00000000514 #7	Tcp1 (ENSMOCG00000020265) #8	Mrpl18 (ENSMOCG00000016680) #9	Pnldc1 (ENSMOCG00000014287) #10	Mas1 (ENSMOCG00000012154) #11	Igf2r (ENSMOCG00000016653) #13	Slc22a1 (ENSMOCG00000006138) #14	Slc22a2 (ENSMOCG00000000432) #15	Slc22a3 (ENSMOCG00000009699) #16	Plg (ENSMOCG00000021058) #17	ENSMOCG00000016399	Map3k4 (ENSMOCG00000015705) #18	Agpat4 (ENSMOCG00000002544) #19	Prkn (ENSMOCG00000000910) #20	Pacrg (ENSMOCG00000018703) #21	Qki (ENSMOCG00000008370) #22	1700010I14Rik (ENSMOCG00000011216) #25	Pde10a (ENSMOCG00000016596) #26	T (ENSMOCG00000016940) #27	Prr18 (ENSMOCG00000014100) #29	ENSMOCG00000012383 #30	ENSMOCG00000003155 ##31	Ccr6 (ENSMOCG00000022621) #32	ENSMOCG00000014231 #36	ENSMOCG00000016647 #34	Rps6ka2 (ENSMOCG00000011166)	ENSMOCG00000019493	ENSMOCG00000016335	ENSMOCG00000011368	Afdn (ENSMOCG00000017063)	Dact2 (ENSMOCG00000011813)
Cricetinae	ANCESTRAL SPECIES	7	ENSGT01030000234626.B #7	ENSGT00550000074878 #8	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208 #17	ENSGT01030000234985	ENSGT00880000138034 #18	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00940000153773.a.a.b.e.b #23	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00940000157912 #27	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988.r ##31	ENSGT01030000234667.b #32	ENSGT00390000007441 #33	ENSGT00640000091563.a #34	ENSGT00400000024673	ENSGT00940000159956	ENSGT00990000203619.A.b.b.a	ENSGT00530000063927.a.a	ENSGT00940000162752
Chinese hamster chok1gshd	MODERN SPECIES	1	TCP1 (ENSCGRG00001007629) #8	Mrpl18 (ENSCGRG00001010667) #9	ENSCGRG00001007470 #10	Mas1 (ENSCGRG00001007652) #11	Igf2r (ENSCGRG00001022921) #13	Slc22a1 (ENSCGRG00001023484) #14	Slc22a2 (ENSCGRG00001023859) #15	Slc22a3 (ENSCGRG00001024404) #16	ENSCGRG00001022809	Plg (ENSCGRG00001023181) #17	Map3k4 (ENSCGRG00001023770) #18	Agpat4 (ENSCGRG00001024340) #19	Prkn (ENSCGRG00001011980) #20	ENSCGRG00001009195	Pacrg (ENSCGRG00001010865) #21	Qki (ENSCGRG00001012114) #22	Pabpc6 (ENSCGRG00001007983) #23	1700010I14Rik (ENSCGRG00001014965) #25	Pde10a (ENSCGRG00001016395) #26	ENSCGRG00001024700 #27	ENSCGRG00001024817 #30	ENSCGRG00001024881 ##31	ENSCGRG00001024749 #34	Rps6ka2 (ENSCGRG00001024721)	ENSCGRG00001024787	Gpr31b (ENSCGRG00001006182)	ENSCGRG00001000721	Ttll2 (ENSCGRG00001024844)	ENSCGRG00001024904	ENSCGRG00001007918	Afdn (ENSCGRG00001013153)
Golden Hamster	MODERN SPECIES	888																Qki (ENSMAUG00000001920) #22	Pabpc6 (ENSMAUG00000003031) #23
Upper Galilee mountains blind mole rat	MODERN SPECIES	552													ENSNGAG00000000152	ENSNGAG00000016095	Pacrg (ENSNGAG00000015468) #21	Qki (ENSNGAG00000009989) #22	Pabpc6 (ENSNGAG00000000987) #23
Lesser Egyptian jerboa	MODERN SPECIES	44	ENSJJAG00000022555 #7	ENSJJAG00000019850 #8	Pnldc1 (ENSJJAG00000009937) #10	Mas1 (ENSJJAG00000011567) #11	Igf2r (ENSJJAG00000019554) #13	Slc22a1 (ENSJJAG00000017119) #14	Slc22a2 (ENSJJAG00000020676) #15	Slc22a3 (ENSJJAG00000015842) #16	Plg (ENSJJAG00000023805) #17	ENSJJAG00000016960 #18	ENSJJAG00000017984 #18	Agpat4 (ENSJJAG00000024380) #19	Prkn (ENSJJAG00000011282) #20	ENSJJAG00000022340	Pacrg (ENSJJAG00000013819) #21	Qki (ENSJJAG00000022765) #22	Pabpc6 (ENSJJAG00000019230) #23	ENSJJAG00000017023	ENSJJAG00000010987	ENSJJAG00000005686 #25	Pde10a (ENSJJAG00000010428) #26	ENSJJAG00000022568 #27	ENSJJAG00000023581 #30	ENSJJAG00000020707 #31	Rps6ka2 (ENSJJAG00000005765)	ENSJJAG00000013485 #34	Cep43 (ENSJJAG00000024342) #33	ENSJJAG00000020398	Afdn (ENSJJAG00000011148)	ENSJJAG00000011658	ENSJJAG00000015043
Kangaroo rat	MODERN SPECIES	396	Sod2 (ENSDORG00000001358)	ENSDORG00000026059	ENSDORG00000011505 #7	ENSDORG00000011510 #8	Pnldc1 (ENSDORG00000011517) #10	Mas1 (ENSDORG00000003320) #11	Igf2r (ENSDORG00000009527) #13	Slc22a1 (ENSDORG00000011523) #14	Slc22a2 (ENSDORG00000008400) #15	Slc22a3 (ENSDORG00000008402) #16	Plg (ENSDORG00000024248) #17	ENSDORG00000025664 #18	Agpat4 (ENSDORG00000015627) #19	ENSDORG00000027142 #20	ENSDORG00000026934 #21	Qki (ENSDORG00000008151) #22	Pde10a (ENSDORG00000005783) #26	ENSDORG00000012736 #27	ENSDORG00000010309 #30	Rps6ka2 (ENSDORG00000007779)	ENSDORG00000011636 #34	Cep43 (ENSDORG00000004815) #33	Ccr6 (ENSDORG00000012594) #32	ENSDORG00000012694	Afdn (ENSDORG00000010887)	ENSDORG00000003713	Smoc2 (ENSDORG00000006153)	Thbs2 (ENSDORG00000005713)	Wdr27 (ENSDORG00000010049)	Phf10 (ENSDORG00000013350)	ENSDORG00000014079
Rodentia_A	ANCESTRAL SPECIES	8	ENSGT01030000234626.B #7	ENSGT00550000074878 #8	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT01030000234985	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00940000157912 #27	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956	ENSGT00640000091563.a #34	ENSGT00390000007441 #33	ENSGT01030000234667.b #32	ENSGT00990000203619.A.b.b.a	ENSGT00530000063927.a.a	ENSGT00940000162752	ENSGT00530000063359.A	ENSGT00940000155237
Hystricomorpha	ANCESTRAL SPECIES	53	ENSGT01030000234626.B #7	ENSGT00940000161879	ENSGT00550000074878 #8	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00940000157912 #27	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956	ENSGT00640000091563.a #34	ENSGT00390000007441 #33	ENSGT01030000234667.b #32	ENSGT00990000203619.A.b.b.a	ENSGT00530000063927.a.a	ENSGT00530000063359.A	ENSGT00940000155237	ENSGT00940000162166	ENSGT00390000014904
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES		SLC22A1 (ENSHGLG00000017500) #14	ENSHGLG00000014427	ENSHGLG00000017482 #15	ENSHGLG00000034005	ENSHGLG00000050994	ENSHGLG00000017477 #16	ENSHGLG00000017452 #17	MAP3K4 (ENSHGLG00000011068) #18	AGPAT4 (ENSHGLG00000008163) #19	ENSHGLG00000034284	PRKN (ENSHGLG00000006873) #20	ENSHGLG00000050950 #20	ENSHGLG00000041594	PACRG (ENSHGLG00000048524) #21	ENSHGLG00000040590	QKI (ENSHGLG00000003074) #22	ENSHGLG00000020018	ENSHGLG00000033943	ENSHGLG00000002800	C6orf118 (ENSHGLG00000040311) #25	PDE10A (ENSHGLG00000003609) #26	TBXT (ENSHGLG00000002638) #27	ENSHGLG00000041990	ENSHGLG00000040761	ENSHGLG00000032835 #28	ENSHGLG00000049190 #29	SFT2D1 (ENSHGLG00000002919) #30	MPC1 (ENSHGLG00000034371) #31	RPS6KA2 (ENSHGLG00000003392)	ENSHGLG00000002675 #34	ENSHGLG00000003848 #33
Naked mole-rat female	MODERN SPECIES	4	ENSHGLG00000040711	ENSHGLG00000019550	ENSHGLG00000000110	CYP2E1 (ENSHGLG00000017022)	ENSHGLG00000048896	ENSHGLG00000014212	ENSHGLG00000049345	ENSHGLG00000043421	ENSHGLG00000032317	ENSHGLG00000033697	ENSHGLG00000049329	ENSHGLG00000037889	ENSHGLG00000044637	ENSHGLG00000020629	ENSHGLG00000020573	ENSHGLG00000034029 #22	ENSHGLG00000034938	ENSHGLG00000042935	ENSHGLG00000020866	ENSHGLG00000021063	SPRN (ENSHGLG00000040631)	MTG1 (ENSHGLG00000009989)	PAOX (ENSHGLG00000013497)	ENSHGLG00000014415	FUOM (ENSHGLG00000011771)	PRAP1 (ENSHGLG00000049443)	CALY (ENSHGLG00000034815)	ENSHGLG00000034033	ZNF511 (ENSHGLG00000018509)	TUBGCP2 (ENSHGLG00000016768)	ADAM8 (ENSHGLG00000041572)
Hystricomorpha_a	ANCESTRAL SPECIES	30	ENSGT01030000234626.B #7	ENSGT00940000161879	ENSGT00550000074878 #8	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00940000157912 #27	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956	ENSGT00640000091563.a #34	ENSGT00390000007441 #33	ENSGT01030000234667.b #32	ENSGT00990000203619.A.b.b.a	ENSGT00530000063927.a.a	ENSGT00530000063359.A	ENSGT00940000155237	ENSGT00940000162166	ENSGT00390000014904
Guinea pig	MODERN SPECIES	60	SOD2 (ENSCPOG00000036439)	WTAP (ENSCPOG00000001669)	ACAT2 (ENSCPOG00000001672) #7	TCP1 (ENSCPOG00000001676) #8	MRPL18 (ENSCPOG00000040103) #9	PNLDC1 (ENSCPOG00000019565) #10	MAS1 (ENSCPOG00000000027) #11	IGF2R (ENSCPOG00000013207) #13	SLC22A2 (ENSCPOG00000001527) #15	SLC22A3 (ENSCPOG00000010127) #16	ENSCPOG00000011605 #17	MAP3K4 (ENSCPOG00000013392) #18	AGPAT4 (ENSCPOG00000006135) #19	PRKN (ENSCPOG00000006136) #20	PACRG (ENSCPOG00000013410) #21	QKI (ENSCPOG00000003424) #22	C6orf118 (ENSCPOG00000008774) #25	PDE10A (ENSCPOG00000008783) #26	TBXT (ENSCPOG00000001358) #27	ENSCPOG00000000167	SFT2D1 (ENSCPOG00000031625) #30	MPC1 (ENSCPOG00000005208) #31	RPS6KA2 (ENSCPOG00000005210)	RNASET2 (ENSCPOG00000007899) #34	CEP43 (ENSCPOG00000036620) #33	CCR6 (ENSCPOG00000034828) #32	GPR31 (ENSCPOG00000001786)	ENSCPOG00000009004	UNC93A (ENSCPOG00000031556)	AFDN (ENSCPOG00000008268)	ENSCPOG00000002358
Hystricomorpha_b	ANCESTRAL SPECIES	29	ENSGT01030000234626.B #7	ENSGT00940000161879	ENSGT00550000074878 #8	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00940000157912 #27	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956	ENSGT00640000091563.a #34	ENSGT00390000007441 #33	ENSGT01030000234667.b #32	ENSGT00530000063927.a.a	ENSGT00530000063359.A	ENSGT00940000155237	ENSGT00390000014904	ENSGT00950000182906.b.a	ENSGT00510000048701
Degu	MODERN SPECIES	153	IGF2R (ENSODEG00000007106) #13	ENSODEG00000019312	SLC22A1 (ENSODEG00000007862) #14	SLC22A2 (ENSODEG00000007315) #15	ENSODEG00000007010	ENSODEG00000006583	SLC22A3 (ENSODEG00000006460) #16	ENSODEG00000009894 #17	ENSODEG00000006455	ENSODEG00000019262	ENSODEG00000006392 #18	ENSODEG00000006672 #18	AGPAT4 (ENSODEG00000007571) #19	PRKN (ENSODEG00000006701) #20	PACRG (ENSODEG00000009517) #21	QKI (ENSODEG00000007408) #22	ENSODEG00000019307	ENSODEG00000019798
Long-tailed chinchilla	DUPLICATION
Long-tailed chinchilla	MODERN SPECIES	146	ACAT2 (ENSCLAG00000009441) #7	ENSCLAG00000009354 #8	ENSCLAG00000012133	MRPL18 (ENSCLAG00000012045) #9	PNLDC1 (ENSCLAG00000003228) #10	MAS1 (ENSCLAG00000017515) #11	IGF2R (ENSCLAG00000002642) #13	SLC22A1 (ENSCLAG00000002646) #14	SLC22A2 (ENSCLAG00000002562) #15	SLC22A3 (ENSCLAG00000002492) #16	ENSCLAG00000002399 #17	MAP3K4 (ENSCLAG00000008769) #18	AGPAT4 (ENSCLAG00000008421) #19	PRKN (ENSCLAG00000008284) #20	PACRG (ENSCLAG00000008105) #21	ENSCLAG00000006238 #22	C6orf118 (ENSCLAG00000006108) #25	PDE10A (ENSCLAG00000004872) #26	TBXT (ENSCLAG00000002632) #27	SFT2D1 (ENSCLAG00000002586) #30	MPC1 (ENSCLAG00000002442) #31	RPS6KA2 (ENSCLAG00000002285)	RNASET2 (ENSCLAG00000005811) #34	CEP43 (ENSCLAG00000005200) #33	CCR6 (ENSCLAG00000005134) #32	ENSCLAG00000004820	UNC93A (ENSCLAG00000004396)	AFDN (ENSCLAG00000003013)	ADGB (ENSCLAG00000004642)	STXBP5 (ENSCLAG00000004159)	SASH1 (ENSCLAG00000003367)
Long-tailed chinchilla	MODERN SPECIES	146	ENSCLAG00000004035	VIP (ENSCLAG00000004151)	MYCT1 (ENSCLAG00000004202)	ENSCLAG00000002479	ENSCLAG00000002568	ENSCLAG00000002772	ESR1 (ENSCLAG00000003026)	CCDC170 (ENSCLAG00000003105)	ARMT1 (ENSCLAG00000003161)	ENSCLAG00000003248	ZBTB2 (ENSCLAG00000003435)	AKAP12 (ENSCLAG00000003496)	MTHFD1L (ENSCLAG00000003603)	PLEKHG1 (ENSCLAG00000004103)	IYD (ENSCLAG00000002712)	ENSCLAG00000002777 #22	ENSCLAG00000003173	PCMT1 (ENSCLAG00000003224)	NUP43 (ENSCLAG00000003394)	LATS1 (ENSCLAG00000003449)	KATNA1 (ENSCLAG00000003505)	GINM1 (ENSCLAG00000003584)	PPIL4 (ENSCLAG00000003991)	ZC3H12D (ENSCLAG00000002831)	TAB2 (ENSCLAG00000002977)	UST (ENSCLAG00000003051)	SASH1 (ENSCLAG00000003367)	STXBP5 (ENSCLAG00000004159)	ADGB (ENSCLAG00000004642)	AFDN (ENSCLAG00000003013)	UNC93A (ENSCLAG00000004396)
Sciuridae	ANCESTRAL SPECIES	1	ENSGT01030000234626.B #7	ENSGT00550000074878 #8	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT01030000234985	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00940000157912 #27	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956	ENSGT00640000091563.a #34	ENSGT00390000007441 #33	ENSGT01030000234667.b #32	ENSGT00990000203619.A.b.b.a	ENSGT00530000063927.a.a	ENSGT00940000162787	ENSGT00940000162166	ENSGT00940000155237
Eurasian red squirrel	MODERN SPECIES	16	MRPL18 (ENSSVLG00005014946) #9	ENSSVLG00005014568 #10	MAS1 (ENSSVLG00005014545) #11	ENSSVLG00005014490	IGF2R (ENSSVLG00005013999) #13	SLC22A1 (ENSSVLG00005013724) #14	SLC22A2 (ENSSVLG00005013453) #15	SLC22A3 (ENSSVLG00005013302) #16	ENSSVLG00005013240 #17	ENSSVLG00005013165 #17	ENSSVLG00005013042 #17	MAP3K4 (ENSSVLG00005011972) #18	AGPAT4 (ENSSVLG00005011803) #19	PRKN (ENSSVLG00005011292) #20	PACRG (ENSSVLG00005011174) #21	QKI (ENSSVLG00005011023) #22	C6orf118 (ENSSVLG00005010851) #25	PDE10A (ENSSVLG00005010372) #26	ENSSVLG00005010236	TBXT (ENSSVLG00005010149) #27	PRR18 (ENSSVLG00005010120) #29	SFT2D1 (ENSSVLG00005010090) #30	MPC1 (ENSSVLG00005009984) #31	ENSSVLG00005009943	ENSSVLG00005009919	ENSSVLG00005009894	RPS6KA2 (ENSSVLG00005009658)	RNASET2 (ENSSVLG00005009530) #34	CEP43 (ENSSVLG00005009283) #33	CCR6 (ENSSVLG00005009206) #32	ENSSVLG00005009071
Marmotini	ANCESTRAL SPECIES	11	ENSGT00550000074878 #8	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT01030000234985	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000015545.v	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00940000157912 #27	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956	ENSGT00640000091563.a #34	ENSGT00390000007441 #33	ENSGT01030000234667.b #32	ENSGT00990000203619.A.b.b.a	ENSGT00530000063927.a.a	ENSGT00940000162787	ENSGT00940000162166	ENSGT00940000155237
Alpin marmot	MODERN SPECIES	55	TCP1 (ENSMMMG00000009649) #8	MRPL18 (ENSMMMG00000009635) #9	PNLDC1 (ENSMMMG00000009617) #10	ENSMMMG00000009610 #11	MAS1 (ENSMMMG00000009593) #11	IGF2R (ENSMMMG00000009520) #13	SLC22A1 (ENSMMMG00000009498) #14	SLC22A2 (ENSMMMG00000009474) #15	SLC22A3 (ENSMMMG00000009457) #16	ENSMMMG00000009428 #17	MAP3K4 (ENSMMMG00000009318) #18	AGPAT4 (ENSMMMG00000009306) #19	ENSMMMG00000009285	PRKN (ENSMMMG00000009240) #20	PACRG (ENSMMMG00000009213) #21	QKI (ENSMMMG00000009192) #22	ENSMMMG00000009166 #25	PDE10A (ENSMMMG00000009083) #26	TBXT (ENSMMMG00000009058) #27	ENSMMMG00000009041 #28	MPC1 (ENSMMMG00000009012) #31	RPS6KA2 (ENSMMMG00000008982)	RNASET2 (ENSMMMG00000008966) #34	ENSMMMG00000008953 #33	CCR6 (ENSMMMG00000008925) #32	ENSMMMG00000008905	FRMD1 (ENSMMMG00000008833)	KIF25 (ENSMMMG00000008818)	AFDN (ENSMMMG00000008187)	UNC93A (ENSMMMG00000008150)	DACT2 (ENSMMMG00000008118)
Marmotini_b	ANCESTRAL SPECIES	56	ENSGT00550000074878 #8	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT01030000234985	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000015545.v	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00940000157912 #27	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956	ENSGT00640000091563.a #34	ENSGT00390000007441 #33	ENSGT01030000234667.b #32	ENSGT00990000203619.A.b.b.a	ENSGT00530000063927.a.a	ENSGT00940000162787	ENSGT00940000162166	ENSGT00940000155237
Arctic ground squirrel	MODERN SPECIES	116					IGF2R (ENSUPAG00010011620) #13	SLC22A1 (ENSUPAG00010011671) #14	SLC22A2 (ENSUPAG00010011687) #15	SLC22A3 (ENSUPAG00010011704) #16	ENSUPAG00010011719 #17	MAP3K4 (ENSUPAG00010011747) #18	ENSUPAG00010011827	AGPAT4 (ENSUPAG00010011837) #19	PRKN (ENSUPAG00010011852) #20	ENSUPAG00010011891	PACRG (ENSUPAG00010011904) #21	QKI (ENSUPAG00010011918) #22	ENSUPAG00010011964 #25	PDE10A (ENSUPAG00010011970) #26	TBXT (ENSUPAG00010012160) #27	PRR18 (ENSUPAG00010012167) #29	SFT2D1 (ENSUPAG00010012170) #30
Squirrel	MODERN SPECIES	89	ENSSTOG00000005572 #8	MRPL18 (ENSSTOG00000005583) #9	PNLDC1 (ENSSTOG00000005595) #10	ENSSTOG00000026373 #11	MAS1 (ENSSTOG00000029761) #11	IGF2R (ENSSTOG00000008960) #13	SLC22A1 (ENSSTOG00000009024) #14	SLC22A2 (ENSSTOG00000010147) #15	SLC22A3 (ENSSTOG00000007036) #16	ENSSTOG00000020315 #17	MAP3K4 (ENSSTOG00000002821) #18	AGPAT4 (ENSSTOG00000002544) #19	PRKN (ENSSTOG00000021965) #20	ENSSTOG00000034364	PACRG (ENSSTOG00000010375) #21	QKI (ENSSTOG00000009113) #22	C6orf118 (ENSSTOG00000020468) #25	PDE10A (ENSSTOG00000001947) #26	TBXT (ENSSTOG00000028238) #27	SFT2D1 (ENSSTOG00000031211) #30	MPC1 (ENSSTOG00000024720) #31	RPS6KA2 (ENSSTOG00000005318)	RNASET2 (ENSSTOG00000010853) #34	CEP43 (ENSSTOG00000028679) #33	CCR6 (ENSSTOG00000022381) #32	GPR31 (ENSSTOG00000002401)	ENSSTOG00000025800	ENSSTOG00000002281	FRMD1 (ENSSTOG00000019365)	KIF25 (ENSSTOG00000027308)	AFDN (ENSSTOG00000014943)
Lagomorpha	ANCESTRAL SPECIES	64	ENSGT00390000013931.a.b.b	ENSGT01030000234626.B #7	ENSGT00550000074878 #8	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00940000156543 #26	ENSGT00940000157912 #27	ENSGT00390000018525.a.a #30
Rabbit	MODERN SPECIES	3	MRPL18 (ENSOCUG00000013858) #9	PNLDC1 (ENSOCUG00000013867) #10	MGRA (ENSOCUG00000001493) #11	IGF2R (ENSOCUG00000008785) #13	SLC22A1 (ENSOCUG00000002539) #14	SLC22A2 (ENSOCUG00000002542) #15	SLC22A3 (ENSOCUG00000004222) #16	ENSOCUG00000001766 #17	MAP3K4 (ENSOCUG00000017154) #18	ENSOCUG00000032142	ENSOCUG00000033664 #19	ENSOCUG00000035966 #20	ENSOCUG00000025750 #20	ENSOCUG00000031144	PACRG (ENSOCUG00000013289) #21	QKI (ENSOCUG00000004117) #22	ENSOCUG00000030844	ENSOCUG00000034613	ENSOCUG00000016006	PDE10A (ENSOCUG00000009218) #26	TBXT (ENSOCUG00000000660) #27
Pika	MODERN SPECIES	291															PACRG (ENSOPRG00000011653) #21	QKI (ENSOPRG00000011662) #22
Tree shrew	MODERN SPECIES	464																ENSTBEG00000016809 #22
Primates	ANCESTRAL SPECIES	5	ENSGT01030000234626.B #7	ENSGT00550000074878 #8	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT01030000234985	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00940000157912 #27	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956	ENSGT00400000024673	ENSGT00640000091563.a #34	ENSGT00390000007441 #33	ENSGT01030000234667.b #32	ENSGT00990000203619.A.b.b.a	ENSGT00530000063927.a.a	ENSGT00940000162752	ENSGT00530000063359.A
Strepsirrhini	ANCESTRAL SPECIES	7	ENSGT01030000234626.B #7	ENSGT00550000074878 #8	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT01030000234985	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00940000157912 #27	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956	ENSGT00640000091563.a #34	ENSGT00390000007441 #33	ENSGT01030000234667.b #32	ENSGT00530000063927.a.a	ENSGT00940000162752	ENSGT00530000063359.A	ENSGT00940000155237	ENSGT00940000162166
Lemuriformes	ANCESTRAL SPECIES	3	ENSGT01030000234626.B #7	ENSGT00550000074878 #8	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT01030000234985	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00940000157912 #27	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956	ENSGT00640000091563.a #34	ENSGT00390000007441 #33	ENSGT01030000234667.b #32	ENSGT00940000162752	ENSGT00530000063359.A	ENSGT00940000155237	ENSGT00940000162166	ENSGT00950000183181.A.a
Mouse lemur	MODERN SPECIES	28	WTAP (ENSMICG00000033919)	ENSMICG00000042830	ACAT2 (ENSMICG00000007988) #7	ENSMICG00000007998 #8	MRPL18 (ENSMICG00000044845) #9	PNLDC1 (ENSMICG00000008021) #10	IGF2R (ENSMICG00000007582) #13	SLC22A1 (ENSMICG00000007625) #14	SLC22A2 (ENSMICG00000007636) #15	SLC22A3 (ENSMICG00000007647) #16	ENSMICG00000034395 #17	MAP3K4 (ENSMICG00000007663) #18	AGPAT4 (ENSMICG00000009184) #19	PRKN (ENSMICG00000009200) #20	PACRG (ENSMICG00000009209) #21	QKI (ENSMICG00000009220) #22	C6orf118 (ENSMICG00000046277) #25	PDE10A (ENSMICG00000008121) #26	TBXT (ENSMICG00000016122) #27	PRR18 (ENSMICG00000042137) #29	SFT2D1 (ENSMICG00000034411) #30	MPC1 (ENSMICG00000003851) #31	RPS6KA2 (ENSMICG00000003856)	RNASET2 (ENSMICG00000014184) #34	CEP43 (ENSMICG00000014198) #33	CCR6 (ENSMICG00000028385) #32	TTLL2 (ENSMICG00000047984)	UNC93A (ENSMICG00000004803)	AFDN (ENSMICG00000003571)	KIF25 (ENSMICG00000044733)	DACT2 (ENSMICG00000033819)
Lemuriformes_a	ANCESTRAL SPECIES	28	ENSGT01030000234626.B #7	ENSGT00550000074878 #8	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT01030000234985	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22
Coquerels sifaka	MODERN SPECIES	358	SOD2 (ENSPCOG00000014692)	WTAP (ENSPCOG00000014167)	ACAT2 (ENSPCOG00000011643) #7	ENSPCOG00000017935 #8	MRPL18 (ENSPCOG00000025100) #9	PNLDC1 (ENSPCOG00000025722) #10	IGF2R (ENSPCOG00000018469) #13	SLC22A1 (ENSPCOG00000021330) #14	SLC22A2 (ENSPCOG00000023545) #15	SLC22A3 (ENSPCOG00000017815) #16	ENSPCOG00000026308 #17	MAP3K4 (ENSPCOG00000015288) #18	AGPAT4 (ENSPCOG00000013535) #19	PRKN (ENSPCOG00000019988) #20	PACRG (ENSPCOG00000013888) #21	QKI (ENSPCOG00000007664) #22	ENSPCOG00000022276
Greater bamboo lemur	MODERN SPECIES	451														ENSPSMG00000005490 #20	PACRG (ENSPSMG00000005502) #21	QKI (ENSPSMG00000005558) #22
Bushbaby	MODERN SPECIES	171	MRPL18 (ENSOGAG00000007327) #9	PNLDC1 (ENSOGAG00000007331) #10	ENSOGAG00000031607 #11	ENSOGAG00000031154	MAS1 (ENSOGAG00000005268) #11	IGF2R (ENSOGAG00000005270) #13	SLC22A1 (ENSOGAG00000005276) #14	ENSOGAG00000005280	SLC22A2 (ENSOGAG00000005281) #15	SLC22A3 (ENSOGAG00000004550) #16	ENSOGAG00000030352 #17	MAP3K4 (ENSOGAG00000004556) #18	AGPAT4 (ENSOGAG00000004567) #19	PRKN (ENSOGAG00000010979) #20	PACRG (ENSOGAG00000004947) #21	QKI (ENSOGAG00000003634) #22	C6orf118 (ENSOGAG00000007625) #25	PDE10A (ENSOGAG00000007629) #26	TBXT (ENSOGAG00000007863) #27	PRR18 (ENSOGAG00000030765) #29	SFT2D1 (ENSOGAG00000006302) #30	RPS6KA2 (ENSOGAG00000006306)	ENSOGAG00000033842	RNASET2 (ENSOGAG00000006308) #34	CEP43 (ENSOGAG00000006310) #33	CCR6 (ENSOGAG00000025164) #32	ENSOGAG00000033331	TTLL2 (ENSOGAG00000033615)	UNC93A (ENSOGAG00000027493)	AFDN (ENSOGAG00000003132)	KIF25 (ENSOGAG00000001753)
Haplorrhini	ANCESTRAL SPECIES	2	ENSGT00390000013931.a.b.b	ENSGT01030000234626.B #7	ENSGT00550000074878 #8	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00940000157912 #27	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956	ENSGT00400000024673	ENSGT00640000091563.a #34	ENSGT00390000007441 #33	ENSGT01030000234667.b #32	ENSGT00990000203619.A.b.b.a	ENSGT00530000063927.a.a	ENSGT00940000162752	ENSGT00530000063359.A
Tarsier	MODERN SPECIES	6896															ENSTSYG00000028458	QKI (ENSTSYG00000036757) #22
Simiiformes	ANCESTRAL SPECIES	5	ENSGT00390000013931.a.b.b	ENSGT01030000234626.B #7	ENSGT00550000074878 #8	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00910000146857	ENSGT00940000157912 #27	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956	ENSGT00400000024673	ENSGT00640000091563.a #34	ENSGT00390000007441 #33	ENSGT01030000234667.b #32	ENSGT00990000203619.A.b.b.a	ENSGT00530000063927.a.a.n.b	ENSGT00530000063927.a.a.n.a
Platyrrhini	ANCESTRAL SPECIES	2	ENSGT00390000013931.a.b.b	ENSGT01030000234626.B #7	ENSGT00550000074878 #8	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00390000009877 #25	ENSGT00940000156543.e #26	ENSGT00910000146857	ENSGT00940000156543.f.b #26	ENSGT00940000157912 #27	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956	ENSGT00640000091563.a #34	ENSGT00390000007441 #33	ENSGT01030000234667.b #32	ENSGT00530000063927.a.a.n.b	ENSGT00530000063359.A	ENSGT00940000162752
Mas night monkey	MODERN SPECIES	265	ACAT2 (ENSANAG00000030553) #7	TCP1 (ENSANAG00000033987) #8	MRPL18 (ENSANAG00000033398) #9	PNLDC1 (ENSANAG00000034713) #10	MAS1 (ENSANAG00000019902) #11	IGF2R (ENSANAG00000031865) #13	SLC22A1 (ENSANAG00000038334) #14	SLC22A2 (ENSANAG00000030328) #15	SLC22A3 (ENSANAG00000030361) #16	PLG (ENSANAG00000030380) #17	MAP3K4 (ENSANAG00000030551) #18	AGPAT4 (ENSANAG00000037521) #19	PRKN (ENSANAG00000032287) #20	ENSANAG00000019305	PACRG (ENSANAG00000020727) #21	QKI (ENSANAG00000029669) #22	C6orf118 (ENSANAG00000023807) #25	ENSANAG00000019760 #26	ENSANAG00000037901
Cebidae	ANCESTRAL SPECIES	5	ENSGT00390000013931.a.b.b	ENSGT01030000234626.B #7	ENSGT00550000074878 #8	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00390000009877 #25	ENSGT00940000156543.e #26	ENSGT00910000146857	ENSGT00940000156543.f.b #26	ENSGT00940000157912 #27	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956	ENSGT00640000091563.a #34	ENSGT00390000007441 #33	ENSGT01030000234667.b #32	ENSGT00530000063927.a.a.n.b	ENSGT00940000162752	ENSGT00530000063359.A
Marmoset	MODERN SPECIES	16	WTAP (ENSCJAG00000011722)	ACAT2 (ENSCJAG00000011777) #7	TCP1 (ENSCJAG00000011792) #8	MRPL18 (ENSCJAG00000011859) #9	PNLDC1 (ENSCJAG00000011865) #10	ENSCJAG00000081097	IGF2R (ENSCJAG00000011908) #13	SLC22A2 (ENSCJAG00000012056) #15	SLC22A3 (ENSCJAG00000012093) #16	PLG (ENSCJAG00000012132) #17	ENSCJAG00000084439	MAP3K4 (ENSCJAG00000012176) #18	AGPAT4 (ENSCJAG00000012323) #19	PRKN (ENSCJAG00000012355) #20	PACRG (ENSCJAG00000012365) #21	QKI (ENSCJAG00000012368) #22	ENSCJAG00000077202	ENSCJAG00000075058	PDE10A (ENSCJAG00000012410) #26	TBXT (ENSCJAG00000012508) #27	PRR18 (ENSCJAG00000012527) #29	SFT2D1 (ENSCJAG00000012533) #30	ENSCJAG00000012552 #31	RPS6KA2 (ENSCJAG00000000462)	ENSCJAG00000077718	ENSCJAG00000000469 #34	ENSCJAG00000053408	ENSCJAG00000073948	CEP43 (ENSCJAG00000000473) #33	ENSCJAG00000076555	ENSCJAG00000077314
Cebidae_a	ANCESTRAL SPECIES	26	ENSGT00390000013931.a.b.b	ENSGT01030000234626.B #7	ENSGT00550000074878 #8	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00390000009877 #25	ENSGT00940000156543.e #26	ENSGT00910000146857	ENSGT00940000156543.f.b #26	ENSGT00940000157912 #27	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956	ENSGT00640000091563.a #34	ENSGT00390000007441 #33	ENSGT01030000234667.b #32
Capuchin	MODERN SPECIES	6	WTAP (ENSCCAG00000021303)	ACAT2 (ENSCCAG00000034076) #7	TCP1 (ENSCCAG00000028316) #8	MRPL18 (ENSCCAG00000027672) #9	PNLDC1 (ENSCCAG00000026232) #10	MAS1 (ENSCCAG00000012059) #11	IGF2R (ENSCCAG00000010739) #13	SLC22A1 (ENSCCAG00000030320) #14	SLC22A2 (ENSCCAG00000020700) #15	SLC22A3 (ENSCCAG00000035674) #16	PLG (ENSCCAG00000034420) #17	MAP3K4 (ENSCCAG00000028977) #18	AGPAT4 (ENSCCAG00000022357) #19	PRKN (ENSCCAG00000024514) #20	PACRG (ENSCCAG00000034067) #21	QKI (ENSCCAG00000025230) #22
Bolivian squirrel monkey	MODERN SPECIES	101	ENSSBOG00000017833	ACAT2 (ENSSBOG00000035773) #7	TCP1 (ENSSBOG00000022736) #8	MRPL18 (ENSSBOG00000017384) #9	PNLDC1 (ENSSBOG00000019135) #10	MAS1 (ENSSBOG00000019912) #11	IGF2R (ENSSBOG00000024078) #13	SLC22A1 (ENSSBOG00000029054) #14	SLC22A2 (ENSSBOG00000035664) #15	SLC22A3 (ENSSBOG00000024841) #16	PLG (ENSSBOG00000033802) #17	MAP3K4 (ENSSBOG00000022969) #18	AGPAT4 (ENSSBOG00000023179) #19	PRKN (ENSSBOG00000019735) #20	PACRG (ENSSBOG00000036098) #21	QKI (ENSSBOG00000036267) #22	C6orf118 (ENSSBOG00000024744) #25	ENSSBOG00000030466 #26	ENSSBOG00000030891	TBXT (ENSSBOG00000023313) #27	SFT2D1 (ENSSBOG00000020053) #30	MPC1 (ENSSBOG00000030115) #31	RPS6KA2 (ENSSBOG00000023209)	RNASET2 (ENSSBOG00000022586) #34	CEP43 (ENSSBOG00000021544) #33	CCR6 (ENSSBOG00000026892) #32
Catarrhini	ANCESTRAL SPECIES	5	ENSGT00550000074878.`b.a.a #8	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000157183.a.a	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT00910000148333	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00910000146857	ENSGT00940000157912 #27	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956	ENSGT00400000024673	ENSGT00640000091563.a #34	ENSGT00390000007441 #33	ENSGT01030000234667.b #32	ENSGT00990000203619.A.b.b.a	ENSGT00530000063927.a.a.n.b.b.a	ENSGT00530000063359.A
Cercopithecidae	ANCESTRAL SPECIES	34	ENSGT00390000006394 #9	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00940000154629.B.db.b.a	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000157183.a.a	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT00910000148333	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00910000146857	ENSGT00940000157912 #27	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956	ENSGT00400000024673	ENSGT00640000091563.a #34	ENSGT00390000007441 #33	ENSGT01030000234667.b #32	ENSGT00990000203619.A.b.b.a	ENSGT00530000063927.a.a.n.b.b.a	ENSGT00530000063359.A
Rhinopithecus	ANCESTRAL SPECIES	403											ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00910000146857	ENSGT00940000157912 #27	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956
Black snub-nosed monkey	MODERN SPECIES	295											PLG (ENSRBIG00000042750) #17	MAP3K4 (ENSRBIG00000036975) #18	AGPAT4 (ENSRBIG00000031711) #19	PRKN (ENSRBIG00000027594) #20	PACRG (ENSRBIG00000005726) #21	QKI (ENSRBIG00000043656) #22	C6orf118 (ENSRBIG00000004596) #25	ENSRBIG00000036166	PDE10A (ENSRBIG00000023020) #26	TBXT (ENSRBIG00000037010) #27	SFT2D1 (ENSRBIG00000036071) #30	MPC1 (ENSRBIG00000036142) #31	RPS6KA2 (ENSRBIG00000018635)
Golden snub-nosed monkey	DUPLICATION
Golden snub-nosed monkey	MODERN SPECIES	1712											PLG (ENSRROG00000042779) #17	MAP3K4 (ENSRROG00000042666) #18	AGPAT4 (ENSRROG00000038839) #19	PRKN (ENSRROG00000029447) #20	PACRG (ENSRROG00000039063) #21	QKI (ENSRROG00000040592) #22	C6orf118 (ENSRROG00000040200) #25	PDE10A (ENSRROG00000034670) #26
Golden snub-nosed monkey	MODERN SPECIES	1301																ENSRROG00000037865 #22
Cercopithecinae	ANCESTRAL SPECIES	6	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00940000154629.B.db.b.a	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000157183.a.a.a	ENSGT00940000155208 #17	ENSGT00940000157183.a.a.b	ENSGT00880000138034 #18	ENSGT00910000148333	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00940000157912 #27	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956	ENSGT00400000024673	ENSGT00640000091563.a #34	ENSGT00390000007441 #33	ENSGT01030000234667.b #32	ENSGT00990000203619.A.b.b.a	ENSGT00530000063927.a.a.n.b.b.a	ENSGT00530000063359.A	ENSGT00940000162752
Vervet Monkey	MODERN SPECIES	4	TCP1 (ENSCSAG00000012567) #8	MRPL18 (ENSCSAG00000012516) #9	PNLDC1 (ENSCSAG00000012478) #10	ENSCSAG00000012433 #11	MAS1 (ENSCSAG00000012417) #11	IGF2R (ENSCSAG00000012403) #13	SLC22A1 (ENSCSAG00000012377) #14	SLC22A2 (ENSCSAG00000012370) #15	SLC22A3 (ENSCSAG00000012348) #16	LPA (ENSCSAG00000012297)	PLG (ENSCSAG00000012290) #17	MAP3K4 (ENSCSAG00000012282) #18	AGPAT4 (ENSCSAG00000012273) #19	ENSCSAG00000018983	PRKN (ENSCSAG00000012267) #20	QKI (ENSCSAG00000012257) #22	ENSCSAG00000012244	C6orf118 (ENSCSAG00000012234) #25	PDE10A (ENSCSAG00000012225) #26	ENSCSAG00000012208	TBXT (ENSCSAG00000012200) #27	PRR18 (ENSCSAG00000012184) #29	SFT2D1 (ENSCSAG00000012180) #30	RPS6KA2 (ENSCSAG00000012167)	ENSCSAG00000012150	RNASET2 (ENSCSAG00000012144) #34	CEP43 (ENSCSAG00000012128) #33	CCR6 (ENSCSAG00000012111) #32	GPR31 (ENSCSAG00000018984)	ENSCSAG00000012101	UNC93A (ENSCSAG00000012079)
Cercopithecinae_a	ANCESTRAL SPECIES	6	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00940000154629.B.db.b.a	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000157183.a.a.b	ENSGT00940000157183.a.a.a	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT00910000148333	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00940000153095.g.b.a.a.a.b.b.b	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00940000157912 #27	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956	ENSGT00640000091563.a #34	ENSGT00390000007441 #33	ENSGT01030000234667.b #32	ENSGT00990000203619.A.b.b.a	ENSGT00530000063359.A	ENSGT00940000162752	ENSGT00530000063927.a.a.n.a
Macaca	ANCESTRAL SPECIES	9	ENSGT00550000074878.`b.a.a.a #8	ENSGT00390000006394.i.a #9	ENSGT00940000153167.A.a #10	ENSGT00940000154629.B.db.b.a	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000157183.a.a.b	ENSGT00940000157183.a.a.a	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00940000153095.g.b.a.a.a.b.b.b	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00940000157912 #27	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956	ENSGT00640000091563.a #34	ENSGT00390000007441 #33	ENSGT01030000234667.b #32	ENSGT00990000203619.A.b.b.a	ENSGT00530000063359.A	ENSGT00940000162752	ENSGT00530000063927.a.a.n.a
Macaca_a	ANCESTRAL SPECIES	26												ENSGT00880000138034 #18	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00940000157912 #27	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956	ENSGT00640000091563.a #34	ENSGT00390000007441 #33	ENSGT01030000234667.b #32	ENSGT00990000203619.A.b.b.a	ENSGT00530000063359.A	ENSGT00940000162752	ENSGT00530000063927.a.a.n.a	ENSGT00940000155237
Rhesus	MODERN SPECIES	14	ENSMMUG00000052876	PNLDC1 (ENSMMUG00000004181) #10	MAS1 (ENSMMUG00000016217) #11	IGF2R (ENSMMUG00000015658) #13	SLC22A1 (ENSMMUG00000015662) #14	SLC22A2 (ENSMMUG00000005715) #15	SLC22A3 (ENSMMUG00000005717) #16	ENSMMUG00000016201	PLG (ENSMMUG00000016945) #17	ENSMMUG00000057619	MAP3K4 (ENSMMUG00000006143) #18	AGPAT4 (ENSMMUG00000006147) #19	PRKN (ENSMMUG00000020410) #20	PACRG (ENSMMUG00000020412) #21	ENSMMUG00000054834	QKI (ENSMMUG00000000428) #22	ENSMMUG00000055955	C4H6orf118 (ENSMMUG00000023613) #25	PDE10A (ENSMMUG00000023614) #26	TBXT (ENSMMUG00000017047) #27	PRR18 (ENSMMUG00000011700) #29	SFT2D1 (ENSMMUG00000011736) #30	MPC1 (ENSMMUG00000011739) #31	RPS6KA2 (ENSMMUG00000005670)	RNASET2 (ENSMMUG00000005673) #34	CEP43 (ENSMMUG00000005674) #33	CCR6 (ENSMMUG00000005676) #32	GPR31 (ENSMMUG00000060558)	UNC93A (ENSMMUG00000008228)	TTLL2 (ENSMMUG00000005680)	ENSMMUG00000029352
Crab-eating macaque	MODERN SPECIES	14	MAS1 (ENSMFAG00000004332) #11	IGF2R (ENSMFAG00000034342) #13	SLC22A1 (ENSMFAG00000033700) #14	SLC22A2 (ENSMFAG00000031849) #15	SLC22A3 (ENSMFAG00000002893) #16	ENSMFAG00000064690	ENSMFAG00000063217	ENSMFAG00000051812 #17	PLG (ENSMFAG00000050264) #17	ENSMFAG00000061670	MAP3K4 (ENSMFAG00000036572) #18	AGPAT4 (ENSMFAG00000041781) #19	PRKN (ENSMFAG00000002107) #20	PACRG (ENSMFAG00000039741) #21	ENSMFAG00000057576	QKI (ENSMFAG00000044069) #22	C6orf118 (ENSMFAG00000031329) #25	PDE10A (ENSMFAG00000046132) #26	TBXT (ENSMFAG00000030026) #27	ENSMFAG00000049559	ENSMFAG00000059048 #29	SFT2D1 (ENSMFAG00000039956) #30	MPC1 (ENSMFAG00000003954) #31	RPS6KA2 (ENSMFAG00000032453)	ENSMFAG00000051223	RNASET2 (ENSMFAG00000039774) #34	ENSMFAG00000049160	CEP43 (ENSMFAG00000040151) #33	CCR6 (ENSMFAG00000062524) #32	UNC93A (ENSMFAG00000035470)	TTLL2 (ENSMFAG00000041604)
Pig-tailed macaque	DUPLICATION
Pig-tailed macaque	MODERN SPECIES	220	TPST2 (ENSMNEG00000040345)	TFIP11 (ENSMNEG00000039522)	SRRD (ENSMNEG00000035293)	HPS4 (ENSMNEG00000042993)	ASPHD2 (ENSMNEG00000021494)	SEZ6L (ENSMNEG00000028464)	MYO18B (ENSMNEG00000042147)	GRK3 (ENSMNEG00000029806)	ENSMNEG00000042198	PIWIL3 (ENSMNEG00000040579)	SGSM1 (ENSMNEG00000033806)	LHFPL7 (ENSMNEG00000029647)	KIAA1671 (ENSMNEG00000041829)	CRYBB3 (ENSMNEG00000031926)	CRYBB2 (ENSMNEG00000029640)	ENSMNEG00000015913 #22	ENSMNEG00000037737	ENSMNEG00000031341
Pig-tailed macaque	MODERN SPECIES	139											PLG (ENSMNEG00000042095) #17	MAP3K4 (ENSMNEG00000032311) #18	AGPAT4 (ENSMNEG00000037275) #19	PRKN (ENSMNEG00000027725) #20	PACRG (ENSMNEG00000042289) #21	ENSMNEG00000043724 #22	ENSMNEG00000026836	C6orf118 (ENSMNEG00000036512) #25	PDE10A (ENSMNEG00000027445) #26	ENSMNEG00000038868	ENSMNEG00000022920	ENSMNEG00000037990	TBXT (ENSMNEG00000040011) #27	SFT2D1 (ENSMNEG00000034299) #30	MPC1 (ENSMNEG00000030001) #31	RPS6KA2 (ENSMNEG00000028453)	RNASET2 (ENSMNEG00000033732) #34	CEP43 (ENSMNEG00000044780) #33	CCR6 (ENSMNEG00000033597) #32	UNC93A (ENSMNEG00000033918)	TTLL2 (ENSMNEG00000043374)
Cercopithecinae_b	ANCESTRAL SPECIES	17	ENSGT01030000234639.A.a #11	ENSGT00940000154629.B.db.b.a	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000157183.a.a.b	ENSGT00940000157183.a.a.a	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT00910000148333	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034.`c #20	ENSGT00940000157330 #21	ENSGT01090000260381	ENSGT00940000155310.b #22	ENSGT00940000153095.g.b.a.a.a.b.b.b	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00940000157912 #27	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956	ENSGT00640000091563.a #34	ENSGT00390000007441 #33	ENSGT01030000234667.b #32	ENSGT00990000203619.A.b.b.a	ENSGT00530000063359.A	ENSGT00940000162752	ENSGT00530000063927.a.a.n.a
Olive baboon	MODERN SPECIES	16	SLC22A2 (ENSPANG00000008238) #15	SLC22A3 (ENSPANG00000025907) #16	ENSPANG00000033663	ENSPANG00000048497	ENSPANG00000042063	ENSPANG00000038033	PLG (ENSPANG00000007072) #17	MAP3K4 (ENSPANG00000013261) #18	ENSPANG00000050992	AGPAT4 (ENSPANG00000043829) #19	PRKN (ENSPANG00000022007) #20	ENSPANG00000048628	PACRG (ENSPANG00000030883) #21	ENSPANG00000040612	ENSPANG00000043294	QKI (ENSPANG00000006711) #22	ENSPANG00000047222	C6orf118 (ENSPANG00000010211) #25	PDE10A (ENSPANG00000019045) #26	TBXT (ENSPANG00000005068) #27	PRR18 (ENSPANG00000035337) #29	SFT2D1 (ENSPANG00000000460) #30	MPC1 (ENSPANG00000030766) #31	RPS6KA2 (ENSPANG00000018198)	ENSPANG00000041620	RNASET2 (ENSPANG00000022370) #34	CEP43 (ENSPANG00000008430) #33	CCR6 (ENSPANG00000038558) #32	GPR31 (ENSPANG00000045312)	UNC93A (ENSPANG00000022873)	ENSPANG00000008429
Cercopithecinae_d	ANCESTRAL SPECIES	70	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00940000154629.B.db.b.a	ENSGT00390000013943 #13	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000157183.a.a.b	ENSGT00940000157183.a.a.a	ENSGT00940000155208 #17	ENSGT00880000138034 #18	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034.`c #20	ENSGT00940000157330 #21	ENSGT01090000260381	ENSGT00940000155310.b #22	ENSGT00940000153307.c.a.h.k.a.a	ENSGT00520000056310.A.d
Drill	DUPLICATION
Drill	MODERN SPECIES	510	TFIP11 (ENSMLEG00000039426)	SRRD (ENSMLEG00000023876)	HPS4 (ENSMLEG00000041598)	ASPHD2 (ENSMLEG00000041774)	SEZ6L (ENSMLEG00000041520)	MYO18B (ENSMLEG00000043528)	ENSMLEG00000033023	GRK3 (ENSMLEG00000035729)	ENSMLEG00000009063	PIWIL3 (ENSMLEG00000038128)	SGSM1 (ENSMLEG00000042242)	LHFPL7 (ENSMLEG00000044167)	KIAA1671 (ENSMLEG00000040930)	CRYBB3 (ENSMLEG00000040105)	ENSMLEG00000033212	ENSMLEG00000035836 #22	ENSMLEG00000027386	DRICH1 (ENSMLEG00000042682)
Drill	MODERN SPECIES	1309													PRKN (ENSMLEG00000042695) #20	PACRG (ENSMLEG00000040096) #21	ENSMLEG00000025987	ENSMLEG00000033347 #22	ENSMLEG00000044157	C6orf118 (ENSMLEG00000041650) #25	PDE10A (ENSMLEG00000036596) #26	ENSMLEG00000035256	ENSMLEG00000004880	ENSMLEG00000032182	ENSMLEG00000039755	ENSMLEG00000035760	TBXT (ENSMLEG00000028132) #27	SFT2D1 (ENSMLEG00000036233) #30	MPC1 (ENSMLEG00000040167) #31	ENSMLEG00000024978	RPS6KA2 (ENSMLEG00000018321)	RNASET2 (ENSMLEG00000020984) #34	CEP43 (ENSMLEG00000030168) #33
Sooty mangabey	DUPLICATION
Sooty mangabey	MODERN SPECIES	474	TFIP11 (ENSCATG00000040954)	SRRD (ENSCATG00000032586)	HPS4 (ENSCATG00000044526)	ASPHD2 (ENSCATG00000027082)	SEZ6L (ENSCATG00000034410)	MYO18B (ENSCATG00000043606)	ENSCATG00000030608	GRK3 (ENSCATG00000036335)	PIWIL3 (ENSCATG00000044030)	ENSCATG00000041646	SGSM1 (ENSCATG00000002153)	LHFPL7 (ENSCATG00000044808)	KIAA1671 (ENSCATG00000043893)	CRYBB3 (ENSCATG00000041743)	CRYBB2 (ENSCATG00000040020)	ENSCATG00000030029 #22	ENSCATG00000014595	DRICH1 (ENSCATG00000037304)	ENSCATG00000035022	ENSCATG00000013082
Sooty mangabey	MODERN SPECIES	220									PLG (ENSCATG00000039756) #17	ENSCATG00000034269	MAP3K4 (ENSCATG00000038027) #18	AGPAT4 (ENSCATG00000012223) #19	PRKN (ENSCATG00000033190) #20	PACRG (ENSCATG00000036404) #21	ENSCATG00000038866	ENSCATG00000037623 #22	ENSCATG00000016910	C6orf118 (ENSCATG00000034818) #25	ENSCATG00000040268	PDE10A (ENSCATG00000039033) #26	ENSCATG00000035247	ENSCATG00000038207	TBXT (ENSCATG00000038841) #27	SFT2D1 (ENSCATG00000034006) #30
Hominoidea	ANCESTRAL SPECIES	4	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000154629.B.db.b.a	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208.p #17	ENSGT00940000157183.a.a	ENSGT00940000155208.o.a #17	ENSGT00880000138034 #18	ENSGT00910000148333	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00910000146857	ENSGT00940000157912 #27	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956	ENSGT00940000154957.B.s.b	ENSGT00640000091563.a #34	ENSGT00390000007441 #33	ENSGT01030000234667.b #32	ENSGT00990000203619.A.b.b.a	ENSGT00530000063927.a.a.n.b.b.a	ENSGT00530000063359.A
Gibbon	MODERN SPECIES	18	WTAP (ENSNLEG00000028233)	ACAT2 (ENSNLEG00000011115) #7	TCP1 (ENSNLEG00000011178) #8	MRPL18 (ENSNLEG00000011269) #9	PNLDC1 (ENSNLEG00000011282) #10	IGF2R (ENSNLEG00000011313) #13	ENSNLEG00000035869	ENSNLEG00000035654 #14	SLC22A2 (ENSNLEG00000011367) #15	ENSNLEG00000011373 #16	ENSNLEG00000011380 #17	MAP3K4 (ENSNLEG00000011428) #18	ENSNLEG00000011464 #19	PRKN (ENSNLEG00000011473) #20	PACRG (ENSNLEG00000011474) #21	ENSNLEG00000011478 #22	C6orf118 (ENSNLEG00000011493) #25	ENSNLEG00000011508 #26	ENSNLEG00000033543	TBXT (ENSNLEG00000011552) #27	SFT2D1 (ENSNLEG00000031636) #30	ENSNLEG00000032002 #31	RPS6KA2 (ENSNLEG00000011560)	ENSNLEG00000034042	RNASET2 (ENSNLEG00000027795) #34	CEP43 (ENSNLEG00000011605) #33	CCR6 (ENSNLEG00000032795) #32	ENSNLEG00000011641	UNC93A (ENSNLEG00000011647)	TTLL2 (ENSNLEG00000031278)	ENSNLEG00000033899
Hominidae	ANCESTRAL SPECIES	5	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000154629.B.db.b.a	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208.p #17	ENSGT00940000157183.a.a	ENSGT00940000155208.o.a #17	ENSGT00880000138034 #18	ENSGT00910000148333	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00910000146857	ENSGT00940000157912 #27	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956	ENSGT00940000154957.B.s.b	ENSGT00640000091563.a #34	ENSGT00390000007441 #33	ENSGT01030000234667.b #32	ENSGT00990000203619.A.b.b.a	ENSGT00530000063927.a.a.n.b.b.a	ENSGT00530000063359.A
Orangutan	MODERN SPECIES	19	PNLDC1 (ENSPPYG00000017148) #10	MAS1 (ENSPPYG00000017261) #11	IGF2R (ENSPPYG00000017149) #13	SLC22A1 (ENSPPYG00000017150) #14	SLC22A2 (ENSPPYG00000017151) #15	SLC22A3 (ENSPPYG00000017152) #16	ENSPPYG00000029841 #17	ENSPPYG00000039278	PLG (ENSPPYG00000017153) #17	MAP3K4 (ENSPPYG00000017155) #18	ENSPPYG00000038768	AGPAT4 (ENSPPYG00000017156) #19	PRKN (ENSPPYG00000017158) #20	PACRG (ENSPPYG00000017159) #21	ENSPPYG00000035748	QKI (ENSPPYG00000017160) #22	C6orf118 (ENSPPYG00000017161) #25	PDE10A (ENSPPYG00000017162) #26	TBXT (ENSPPYG00000017163) #27	ENSPPYG00000032308	PRR18 (ENSPPYG00000017164) #29	ENSPPYG00000017165 #30	ENSPPYG00000017166 #31	RPS6KA2 (ENSPPYG00000017167)	RNASET2 (ENSPPYG00000037542) #34	CEP43 (ENSPPYG00000032640) #33	CCR6 (ENSPPYG00000017168) #32	GPR31 (ENSPPYG00000017169)	UNC93A (ENSPPYG00000017170)	TTLL2 (ENSPPYG00000017171)	ENSPPYG00000017172
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	4	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000154629.B.db.b.a	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208.p #17	ENSGT00940000157183.a.a	ENSGT00940000155208.o.a #17	ENSGT00880000138034 #18	ENSGT00910000148333	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00910000146857	ENSGT00940000157912 #27	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956	ENSGT00940000154957.B.s.b	ENSGT00640000091563.a.a #34	ENSGT00390000007441 #33	ENSGT01030000234667.b #32	ENSGT00990000203619.A.b.b.a	ENSGT00530000063927.a.a.n.b.b.a	ENSGT00530000063359.A
Gorilla	MODERN SPECIES	19	TCP1 (ENSGGOG00000014063) #8	MRPL18 (ENSGGOG00000014075) #9	PNLDC1 (ENSGGOG00000014077) #10	MAS1 (ENSGGOG00000010485) #11	IGF2R (ENSGGOG00000001658) #13	ENSGGOG00000022414	SLC22A1 (ENSGGOG00000001671) #14	SLC22A2 (ENSGGOG00000013636) #15	SLC22A3 (ENSGGOG00000001951) #16	LPA (ENSGGOG00000016065)	PLG (ENSGGOG00000010300) #17	MAP3K4 (ENSGGOG00000008360) #18	ENSGGOG00000023810	PRKN (ENSGGOG00000041961) #20	PACRG (ENSGGOG00000014095) #21	QKI (ENSGGOG00000000733) #22	C6orf118 (ENSGGOG00000014415) #25	ENSGGOG00000003914 #26	TBXT (ENSGGOG00000007693) #27	ENSGGOG00000028089 #29	SFT2D1 (ENSGGOG00000024304) #30	ENSGGOG00000038590 #31	RPS6KA2 (ENSGGOG00000004934)	ENSGGOG00000041475	RNASET2 (ENSGGOG00000000498) #34	CEP43 (ENSGGOG00000024970) #33	CCR6 (ENSGGOG00000040098) #32	GPR31 (ENSGGOG00000007378)	ENSGGOG00000040061	ENSGGOG00000011740	TTLL2 (ENSGGOG00000014857)
Homo/Pan group	ANCESTRAL SPECIES	5	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000154629.B.db.b.a	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208.p #17	ENSGT00940000157183.a.a	ENSGT00940000155208.o.a #17	ENSGT00880000138034 #18	ENSGT00910000148333	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00910000146857	ENSGT00940000157912 #27	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956	ENSGT00940000154957.B.s.b	ENSGT00640000091563.a.a #34	ENSGT00390000007441 #33	ENSGT01030000234667.b #32	ENSGT00990000203619.A.b.b.a	ENSGT00530000063927.a.a.n.b.b.a	ENSGT00530000063359.A
Human	MODERN SPECIES	18	ACAT2 (ENSG00000120437) #7	TCP1 (ENSG00000120438) #8	MRPL18 (ENSG00000112110) #9	PNLDC1 (ENSG00000146453) #10	MAS1 (ENSG00000130368) #11	IGF2R (ENSG00000197081) #13	SLC22A1 (ENSG00000175003) #14	SLC22A2 (ENSG00000112499) #15	SLC22A3 (ENSG00000146477) #16	LPA (ENSG00000198670)	PLG (ENSG00000122194) #17	MAP3K4 (ENSG00000085511) #18	AGPAT4 (ENSG00000026652) #19	PRKN (ENSG00000185345) #20	PACRG (ENSG00000112530) #21	QKI (ENSG00000112531) #22	C6orf118 (ENSG00000112539) #25	PDE10A (ENSG00000112541) #26	TBXT (ENSG00000164458) #27	PRR18 (ENSG00000176381) #29	SFT2D1 (ENSG00000198818) #30	MPC1 (ENSG00000060762) #31	RPS6KA2 (ENSG00000071242)	RAMACL (ENSG00000235272)	ENSG00000249141	RNASET2 (ENSG00000026297) #34	CEP43 (ENSG00000213066) #33	ENSG00000272980	CCR6 (ENSG00000112486) #32	GPR31 (ENSG00000120436)	UNC93A (ENSG00000112494)
Pan	ANCESTRAL SPECIES	5	ENSGT00940000153167.A.a #10	ENSGT01030000234639.A.a #11	ENSGT00390000013943 #13	ENSGT00940000154629.B.db.b.a	ENSGT00940000162065 #14	ENSGT00940000155089 #15	ENSGT00940000160810 #16	ENSGT00940000155208.p #17	ENSGT00940000157183.a.a	ENSGT00940000155208.o.a #17	ENSGT00880000138034 #18	ENSGT00910000148333	ENSGT00950000182836.b.b.b.b #19	ENSGT00390000011034 #20	ENSGT00940000157330 #21	ENSGT00940000155310.b #22	ENSGT00390000009877 #25	ENSGT00940000156543 #26	ENSGT00910000146857	ENSGT00940000157912 #27	ENSGT00390000002164 #29	ENSGT00390000018525.a.a #30	ENSGT00510000046988 #31	ENSGT00940000159956	ENSGT00940000154957.B.s.b	ENSGT00640000091563.a.a #34	ENSGT00390000007441 #33	ENSGT01030000234667.b #32	ENSGT00990000203619.A.b.b.a	ENSGT00530000063927.a.a.n.b.b.a	ENSGT00530000063359.A
Chimpanzee	MODERN SPECIES	19	MRPL18 (ENSPTRG00000018761) #9	PNLDC1 (ENSPTRG00000018762) #10	MAS1 (ENSPTRG00000018763) #11	IGF2R (ENSPTRG00000018764) #13	ENSPTRG00000051861	SLC22A1 (ENSPTRG00000018767) #14	SLC22A2 (ENSPTRG00000018768) #15	SLC22A3 (ENSPTRG00000018769) #16	LPA (ENSPTRG00000018770)	PLG (ENSPTRG00000018774) #17	MAP3K4 (ENSPTRG00000046415) #18	ENSPTRG00000048118	AGPAT4 (ENSPTRG00000018779) #19	PRKN (ENSPTRG00000018781) #20	PACRG (ENSPTRG00000048824) #21	QKI (ENSPTRG00000018785) #22	C6H6orf118 (ENSPTRG00000018786) #25	PDE10A (ENSPTRG00000018787) #26	TBXT (ENSPTRG00000018789) #27	PRR18 (ENSPTRG00000018790) #29	SFT2D1 (ENSPTRG00000023700) #30	MPC1 (ENSPTRG00000024084) #31	RPS6KA2 (ENSPTRG00000018793)	ENSPTRG00000047422	RNASET2 (ENSPTRG00000018796) #34	CEP43 (ENSPTRG00000033965) #33	GPR31 (ENSPTRG00000018800)	ENSPTRG00000018802	UNC93A (ENSPTRG00000018803)	TTLL2 (ENSPTRG00000018805)	ENSPTRG00000047252
Bonobo	MODERN SPECIES	19	PNLDC1 (ENSPPAG00000026651) #10	MAS1 (ENSPPAG00000003542) #11	IGF2R (ENSPPAG00000022058) #13	ENSPPAG00000029247	SLC22A1 (ENSPPAG00000017979) #14	SLC22A2 (ENSPPAG00000012601) #15	SLC22A3 (ENSPPAG00000009760) #16	ENSPPAG00000026664 #17	ENSPPAG00000034032	PLG (ENSPPAG00000042434) #17	MAP3K4 (ENSPPAG00000037745) #18	ENSPPAG00000006234	AGPAT4 (ENSPPAG00000041903) #19	PRKN (ENSPPAG00000034661) #20	PACRG (ENSPPAG00000000755) #21	ENSPPAG00000038059 #22	C6orf118 (ENSPPAG00000032502) #25	ENSPPAG00000034143 #26	ENSPPAG00000025444	TBXT (ENSPPAG00000030203) #27	SFT2D1 (ENSPPAG00000001173) #30	ENSPPAG00000034758 #31	RPS6KA2 (ENSPPAG00000038721)	ENSPPAG00000038016	RNASET2 (ENSPPAG00000031557) #34	CEP43 (ENSPPAG00000039127) #33	CCR6 (ENSPPAG00000035908) #32	GPR31 (ENSPPAG00000013225)	ENSPPAG00000028331	ENSPPAG00000031294	UNC93A (ENSPPAG00000034812)