Hystricomorpha_a	ANCESTRAL SPECIES	7	ENSGT00940000160716 #7	ENSGT00950000183205.b.a.b.a.b #8	ENSGT00390000016138 #9	ENSGT00940000158969 #10	ENSGT00950000183093.A.a #11	ENSGT00810000125439.B #12	ENSGT00390000013052 #13	ENSGT00530000063868.b #14	ENSGT00940000158792 #15	ENSGT00530000063554.b #16	ENSGT00940000158636 #17	ENSGT00940000157529 #18	ENSGT00390000016228 #19	ENSGT00730000111061.p.z #20	ENSGT00390000013995.b.b #21	ENSGT00940000156242 #22	ENSGT00950000183062.a.a.b #24	ENSGT00940000155915 #25
Guinea pig	MODERN SPECIES	9	SLC38A1 (ENSCPOG00000005301) #7	SCAF11 (ENSCPOG00000005084) #8	ARID2 (ENSCPOG00000035312) #9	ANO6 (ENSCPOG00000013577) #10	DBX2 (ENSCPOG00000011069) #11	NELL2 (ENSCPOG00000000976) #12	TMEM117 (ENSCPOG00000015520) #13	TWF1 (ENSCPOG00000001499) #14	IRAK4 (ENSCPOG00000001771) #15	PUS7L (ENSCPOG00000001769) #16	ADAMTS20 (ENSCPOG00000005119) #17	PRICKLE1 (ENSCPOG00000005579) #18	PPHLN1 (ENSCPOG00000038546) #19	ZCRB1 (ENSCPOG00000031127) #20	YAF2 (ENSCPOG00000015156) #21	GXYLT1 (ENSCPOG00000000860) #22	ENSCPOG00000021462 #23	PDZRN4 (ENSCPOG00000000372) #24	CNTN1 (ENSCPOG00000008811) #25	ENSCPOG00000037897 #26
Hystricomorpha_b	ANCESTRAL SPECIES	78	ENSGT00940000160716 #7	ENSGT00950000183205.b.a.b.a.b #8	ENSGT00390000016138 #9	ENSGT00940000158969 #10	ENSGT00950000183093.A.a #11	ENSGT00810000125439.B #12	ENSGT00390000013052 #13	ENSGT00530000063868.b #14	ENSGT00940000158792 #15	ENSGT00530000063554.b #16	ENSGT00940000158636 #17	ENSGT00940000157529 #18	ENSGT00390000016228 #19	ENSGT00730000111061.p.z #20	ENSGT00390000013995.b.b #21	ENSGT00940000156242 #22	ENSGT00950000183062.a.a.b #24	ENSGT00940000155915 #25
Degu	MODERN SPECIES	141	ENSODEG00000018973	ENSODEG00000018965	ENSODEG00000003909	ANO6 (ENSODEG00000003814) #10	NELL2 (ENSODEG00000003669) #12	TMEM117 (ENSODEG00000003583) #13	ENSODEG00000003529 #14	ENSODEG00000018930	PUS7L (ENSODEG00000003484) #16	ADAMTS20 (ENSODEG00000003382) #17	PRICKLE1 (ENSODEG00000003320) #18	PPHLN1 (ENSODEG00000003297) #19	ENSODEG00000003268	ENSODEG00000003254	YAF2 (ENSODEG00000004846) #21	GXYLT1 (ENSODEG00000004822) #22	PDZRN4 (ENSODEG00000004788) #24	CNTN1 (ENSODEG00000004694) #25
Long-tailed chinchilla	MODERN SPECIES	207	SCAF11 (ENSCLAG00000002050) #8	ARID2 (ENSCLAG00000001973) #9	ANO6 (ENSCLAG00000002430) #10	DBX2 (ENSCLAG00000002211) #11	ENSCLAG00000002122	NELL2 (ENSCLAG00000002075) #12	TMEM117 (ENSCLAG00000002010) #13	ENSCLAG00000003492 #14	IRAK4 (ENSCLAG00000002656) #15	PUS7L (ENSCLAG00000002416) #16	ADAMTS20 (ENSCLAG00000005016) #17	PRICKLE1 (ENSCLAG00000003980) #18	PPHLN1 (ENSCLAG00000002867) #19	ZCRB1 (ENSCLAG00000002653) #20	YAF2 (ENSCLAG00000002516) #21	GXYLT1 (ENSCLAG00000003085) #22	PDZRN4 (ENSCLAG00000002906) #24	CNTN1 (ENSCLAG00000010381) #25