Euarchontoglires_A	ANCESTRAL SPECIES	4	ENSGT00510000049735	ENSGT00940000158799	ENSGT00940000153173.b.b	ENSGT00940000154994.b	ENSGT00940000157202 #15	ENSGT00940000157943.b #16	ENSGT00940000155338 #17	ENSGT00510000048410	ENSGT00390000007911 #18	ENSGT00940000154881 #19	ENSGT00940000159275 #20	ENSGT00940000154664 #21	ENSGT00390000012959.a	ENSGT00940000156331	ENSGT00940000153814.b	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b	ENSGT00390000015789.c.b	ENSGT00940000163247	ENSGT00940000160681.C #25	ENSGT00940000154602.b #26	ENSGT00940000154602.a #27	ENSGT00940000162894	ENSGT00940000155258.t #28	ENSGT00940000154403.a.a #29	ENSGT00940000154403.a.b #30	ENSGT00940000161311 #31	ENSGT00940000161787 #32	ENSGT00940000161991 #33
Glires	ANCESTRAL SPECIES	3	ENSGT00510000049735	ENSGT00940000158799	ENSGT00940000153173.b.b	ENSGT00940000154994.b	ENSGT00940000157202 #15	ENSGT00940000157943.b #16	ENSGT00940000155338 #17	ENSGT00510000048410	ENSGT00390000007911 #18	ENSGT00940000154881 #19	ENSGT00940000159275 #20	ENSGT00940000154664 #21	ENSGT00390000012959.a	ENSGT00940000156331	ENSGT00940000153814.b	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b	ENSGT00390000015789.c.b.t	ENSGT00940000163247	ENSGT00940000160681.C #25	ENSGT00940000154602.b #26	ENSGT00940000154602.a #27	ENSGT00940000162894	ENSGT00940000155258.t #28	ENSGT00940000154403.a.a #29	ENSGT00950000183311	ENSGT00940000154403.a.b #30	ENSGT00940000161311 #31	ENSGT00940000161787 #32
Lagomorpha	ANCESTRAL SPECIES		ENSGT00390000016401	ENSGT00390000014272	ENSGT00940000156363	ENSGT00940000154971	ENSGT00510000049735	ENSGT00940000158799	ENSGT00940000153173.b.b	ENSGT00940000157202 #15	ENSGT00940000157943.b #16	ENSGT00940000155338 #17	ENSGT00390000007911 #18	ENSGT00940000154881 #19	ENSGT00940000159275 #20	ENSGT00940000154664 #21	ENSGT00940000153814.b	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.d.b.b	ENSGT00940000160681.C #25	ENSGT00940000154602.b #26	ENSGT00940000154602.a #27	ENSGT00940000155258.t #28	ENSGT00940000154403.a.a #29	ENSGT00940000154403.a.b #30	ENSGT00940000161311 #31	ENSGT00940000161787 #32	ENSGT00940000161991 #33	ENSGT00940000163444	ENSGT00940000162088 #34	ENSGT00940000153980.j.a.b.a.b #35
Pika	MODERN SPECIES	3821									ZNF385C (ENSOPRG00000008120) #15	NKIRAS2 (ENSOPRG00000008113) #16	DNAJC7 (ENSOPRG00000008093) #17	ODAD4 (ENSOPRG00000008065) #18	ACLY (ENSOPRG00000008041) #19	ENSOPRG00000008022 #20	KLHL10 (ENSOPRG00000008014) #21	JUP (ENSOPRG00000007992) #22	ENSOPRG00000007970 #23	GAST (ENSOPRG00000007965) #24	KRT17 (ENSOPRG00000007946) #25	KRT16 (ENSOPRG00000007938) #26	KRT14 (ENSOPRG00000007922) #27	KRT19 (ENSOPRG00000007908) #28	KRT15 (ENSOPRG00000007893) #29	ENSOPRG00000007873 #30	KRT36 (ENSOPRG00000007861) #31	KRT35 (ENSOPRG00000007848) #32	KRT32 (ENSOPRG00000007824) #33	ENSOPRG00000007809 #34	ENSOPRG00000007790 #35	KRT34 (ENSOPRG00000007768) #36	ENSOPRG00000007755 #37
Rabbit	MODERN SPECIES	10	HCRT (ENSOCUG00000013324)	KCNH4 (ENSOCUG00000013312)	RAB5C (ENSOCUG00000013307)	HSPB9 (ENSOCUG00000013299)	KAT2A (ENSOCUG00000013285)	DHX58 (ENSOCUG00000013278)	ZNF385C (ENSOCUG00000013271) #15	NKIRAS2 (ENSOCUG00000013267) #16	DNAJC7 (ENSOCUG00000013255) #17	ODAD4 (ENSOCUG00000013236) #18	ACLY (ENSOCUG00000013212) #19	KLHL10 (ENSOCUG00000024581) #21	FKBP10 (ENSOCUG00000000611)	KLHL11 (ENSOCUG00000000614) #20	P3H4 (ENSOCUG00000007629)	JUP (ENSOCUG00000012063) #22	GAST (ENSOCUG00000024965) #24	ENSOCUG00000000604	KRT17 (ENSOCUG00000029569) #25	KRT16 (ENSOCUG00000011781) #26	KRT35 (ENSOCUG00000013084) #32	KRT15 (ENSOCUG00000013123) #29	KRT32 (ENSOCUG00000013079) #33	ENSOCUG00000014208	ENSOCUG00000009206 #34	ENSOCUG00000011173 #34	KRT34 (ENSOCUG00000014195) #36	ENSOCUG00000013096 #37	KRT33A (ENSOCUG00000014192) ##35	KRTAP17-1 (ENSOCUG00000025222)	ENSOCUG00000024522
Rodentia	ANCESTRAL SPECIES	4	ENSGT00510000049735	ENSGT00940000158799	ENSGT00940000153173.b.b	ENSGT00940000154994.b	ENSGT00940000157202 #15	ENSGT00940000157943.b #16	ENSGT00940000155338 #17	ENSGT00510000048410	ENSGT00390000007911 #18	ENSGT00940000154881 #19	ENSGT00940000159275 #20	ENSGT00940000154664 #21	ENSGT00390000012959.a	ENSGT00940000156331	ENSGT00940000153814.b	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b	ENSGT00390000015789.c.b.t	ENSGT00940000163247	ENSGT00940000160681.C #25	ENSGT00940000154602.b #26	ENSGT00940000154602.a #27	ENSGT00940000162894	ENSGT00940000155258.t #28	ENSGT00940000154403.a.a #29	ENSGT00940000154403.a.b #30	ENSGT00940000161311 #31	ENSGT00940000161787 #32	ENSGT00940000161991 #33
Rodentia_B	ANCESTRAL SPECIES	1	ENSGT00940000154971	ENSGT00510000049735	ENSGT00940000158799	ENSGT00940000153173.b.b	ENSGT00940000157202 #15	ENSGT00940000157943.b #16	ENSGT00940000155338 #17	ENSGT00510000048410	ENSGT00390000007911 #18	ENSGT00940000154881 #19	ENSGT00940000159275 #20	ENSGT00940000154664 #21	ENSGT00390000012959.a	ENSGT00940000156331	ENSGT00940000153814.b	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.b.t	ENSGT00940000163247	ENSGT00940000160681.C #25	ENSGT00940000154602.b #26	ENSGT00940000154602.a #27	ENSGT00940000162894	ENSGT00940000155258.t #28	ENSGT00940000154403.a.a #29	ENSGT00940000154403.a.b #30	ENSGT00940000161311 #31	ENSGT00940000161787 #32	ENSGT00940000161991 #33	ENSGT00940000153980.j.a.b.a.b #35
Myomorpha	ANCESTRAL SPECIES		ENSGT00940000154971	ENSGT00510000049735	ENSGT00940000158799	ENSGT00940000153173.b.b	ENSGT00940000157202 #15	ENSGT00940000157943.b #16	ENSGT00940000155338 #17	ENSGT00510000048410	ENSGT00390000007911 #18	ENSGT00940000154881 #19	ENSGT00940000159275 #20	ENSGT00940000154664 #21	ENSGT00390000012959.a	ENSGT00940000156331	ENSGT00940000153814.b	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.b.t	ENSGT00940000163247	ENSGT00940000160681.C #25	ENSGT00940000154602.b #26	ENSGT00940000154602.a #27	ENSGT00940000162894	ENSGT00940000155258.t #28	ENSGT00940000154403.a.a #29	ENSGT00940000154403.a.b #30	ENSGT00940000161311 #31	ENSGT00940000161787 #32	ENSGT00940000161991 #33	ENSGT00940000153980.j.a.b.a.b #35
Muroidea	ANCESTRAL SPECIES		ENSGT00940000154971	ENSGT00510000049735	ENSGT00940000158799	ENSGT00940000153173.b.b	ENSGT00940000157202 #15	ENSGT00940000157943.b #16	ENSGT00940000155338 #17	ENSGT00510000048410	ENSGT00390000007911 #18	ENSGT00940000154881 #19	ENSGT00940000159275 #20	ENSGT00940000154664 #21	ENSGT00390000012959.a	ENSGT00940000156331	ENSGT00940000153814.b	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.b.t.c.a	ENSGT00940000163247	ENSGT00940000160681.C #25	ENSGT00940000154602.b #26	ENSGT00940000154602.a #27	ENSGT00940000162894	ENSGT00940000155258.t #28	ENSGT00940000154403.a.a #29	ENSGT00940000154403.a.b #30	ENSGT00940000161311 #31	ENSGT00940000161787 #32	ENSGT00940000161991 #33	ENSGT00940000153980.j.a.b.a.b #35
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00940000154971	ENSGT00510000049735	ENSGT00940000158799	ENSGT00940000153173.b.b	ENSGT00940000157202 #15	ENSGT00940000157943.b #16	ENSGT00940000155338 #17	ENSGT00510000048410	ENSGT00390000007911 #18	ENSGT00940000154881 #19	ENSGT00940000159275 #20	ENSGT00940000154664 #21	ENSGT00390000012959.a	ENSGT00940000156331	ENSGT00940000153814.b	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.b.t.c.b.a	ENSGT00940000163247	ENSGT00940000160681.C #25	ENSGT00940000154602.b #26	ENSGT00940000154602.a #27	ENSGT00940000162894	ENSGT00940000155258.t #28	ENSGT00940000154403.a.a #29	ENSGT00940000154403.a.b #30	ENSGT00940000161311 #31	ENSGT00940000161787 #32	ENSGT00940000161991 #33	ENSGT00940000153980.j.a.b.a.b #35
Cricetidae	ANCESTRAL SPECIES		ENSGT00940000154971	ENSGT00510000049735	ENSGT00940000158799	ENSGT00940000153173.b.b	ENSGT00940000157202 #15	ENSGT00940000157943.b #16	ENSGT00940000155338 #17	ENSGT00510000048410	ENSGT00390000007911 #18	ENSGT00940000154881 #19	ENSGT00940000159275 #20	ENSGT00940000154664 #21	ENSGT00390000012959.a	ENSGT00940000156331	ENSGT00940000153814.b	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.b.t.c.b.a	ENSGT00940000163247	ENSGT00940000160681.C #25	ENSGT00940000154602.b #26	ENSGT00940000154602.a #27	ENSGT00940000162894	ENSGT00940000155258.t #28	ENSGT00940000154403.a.a #29	ENSGT00940000154403.a.b #30	ENSGT00940000161311 #31	ENSGT00940000161787 #32	ENSGT00940000161991 #33	ENSGT00940000153980.j.a.b.a.b #35
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00940000154971	ENSGT00510000049735	ENSGT00940000158799	ENSGT00940000153173.b.b	ENSGT00940000157202 #15	ENSGT00940000157943.b #16	ENSGT00940000155338 #17	ENSGT00510000048410	ENSGT00390000007911 #18	ENSGT00940000154881 #19	ENSGT00940000159275 #20	ENSGT00940000154664 #21	ENSGT00390000012959.a	ENSGT00940000156331	ENSGT00940000153814.b	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.b.t.c.b.a	ENSGT00940000163247	ENSGT00940000160681.C #25	ENSGT00940000154602.b #26	ENSGT00940000154602.a #27	ENSGT00940000162894	ENSGT00940000155258.t #28	ENSGT00940000154403.a.a #29	ENSGT00940000154403.a.b #30	ENSGT00940000161311 #31	ENSGT00940000161787 #32	ENSGT00940000161991 #33	ENSGT00940000153980.j.a.b.a.b #35
Northern American deer mouse	MODERN SPECIES	21	Rab5c (ENSPEMG00000017971)	Hspb9 (ENSPEMG00000017059)	Kat2a (ENSPEMG00000017221)	Dhx58 (ENSPEMG00000018681)	Zfp385c (ENSPEMG00000018609) #15	Nkiras2 (ENSPEMG00000030424) #16	Dnajc7 (ENSPEMG00000009887) #17	Cnp (ENSPEMG00000011807)	Odad4 (ENSPEMG00000004971) #18	Acly (ENSPEMG00000006656) #19	Klhl11 (ENSPEMG00000026157) #20	Klhl10 (ENSPEMG00000016939) #21	Nt5c3b (ENSPEMG00000016608)	Fkbp10 (ENSPEMG00000015119)	P3h4 (ENSPEMG00000003895)	Jup (ENSPEMG00000011596) #22	Hap1 (ENSPEMG00000012716) #23	Gast (ENSPEMG00000011428) #24	ENSPEMG00000015694	Krt42 (ENSPEMG00000012473)	Krt17 (ENSPEMG00000018467) #25	Krt16 (ENSPEMG00000010768) #26	Krt14 (ENSPEMG00000018789) #27	Krt9 (ENSPEMG00000008176)	Krt19 (ENSPEMG00000006832) #28	Krt15 (ENSPEMG00000017616) #29	Krt13 (ENSPEMG00000018368) #30	Krt36 (ENSPEMG00000013117) #31	Krt35 (ENSPEMG00000002875) #32	Krt32 (ENSPEMG00000018356) #33	Krt31 (ENSPEMG00000006083) #35
Prairie vole	MODERN SPECIES	114													Nt5c3b (ENSMOCG00000012904)	Fkbp10 (ENSMOCG00000020969)	P3h4 (ENSMOCG00000020222)	Jup (ENSMOCG00000013988) #22	Hap1 (ENSMOCG00000018599) #23	Gast (ENSMOCG00000015714) #24	Eif1 (ENSMOCG00000013986)	Krt42 (ENSMOCG00000020707)	Krt17 (ENSMOCG00000007079) #25	Krt16 (ENSMOCG00000002310) #26	Krt14 (ENSMOCG00000012751) #27	Krt9 (ENSMOCG00000007293)	Krt19 (ENSMOCG00000015107) #28	Krt15 (ENSMOCG00000014586) #29	Krt13 (ENSMOCG00000010928) #30	ENSMOCG00000006876	Krt36 (ENSMOCG00000018894) #31	Krt35 (ENSMOCG00000011239) #32	Krt32 (ENSMOCG00000000760) #33
Cricetinae	ANCESTRAL SPECIES		ENSGT00940000154971	ENSGT00510000049735	ENSGT00940000158799	ENSGT00940000153173.b.b	ENSGT00940000157202 #15	ENSGT00940000157943.b #16	ENSGT00940000155338 #17	ENSGT00510000048410	ENSGT00390000007911 #18	ENSGT00940000154881 #19	ENSGT00940000159275 #20	ENSGT00940000154664 #21	ENSGT00390000012959.a	ENSGT00940000156331	ENSGT00940000153814.b	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.b.t.c.b.a	ENSGT00940000163247	ENSGT00940000160681.C #25	ENSGT00940000154602.b #26	ENSGT00940000154602.a #27	ENSGT00940000162894	ENSGT00940000155258.t #28	ENSGT00940000154403.a.a #29	ENSGT00940000154403.a.b #30	ENSGT00940000161311 #31	ENSGT00940000161787 #32	ENSGT00940000161991 #33	ENSGT00940000153980.j.a.b.a.b #35
Chinese hamster chok1gshd	MODERN SPECIES	33	Rab5c (ENSCGRG00001014226)	Hspb9 (ENSCGRG00001012537)	Kat2a (ENSCGRG00001018026)	Dhx58 (ENSCGRG00001010336)	Zfp385c (ENSCGRG00001021185) #15	Nkiras2 (ENSCGRG00001021109) #16	Dnajc7 (ENSCGRG00001022002) #17	Cnp (ENSCGRG00001019037)	Odad4 (ENSCGRG00001022193) #18	ENSCGRG00001020299 #19	Klhl11 (ENSCGRG00001000275) #20	Klhl10 (ENSCGRG00001017363) #21	Nt5c3b (ENSCGRG00001023229)	Fkbp10 (ENSCGRG00001015001)	P3h4 (ENSCGRG00001005342)	Jup (ENSCGRG00001005618) #22	Hap1 (ENSCGRG00001016906) #23	Gast (ENSCGRG00001018132) #24	ENSCGRG00001015513	Krt42 (ENSCGRG00001005409)	Krt17 (ENSCGRG00001020336) #25	Krt16 (ENSCGRG00001015254) #26	Krt14 (ENSCGRG00001015161) #27	Krt9 (ENSCGRG00001021018)	Krt19 (ENSCGRG00001015028) #28	Krt15 (ENSCGRG00001012486) #29	Krt13 (ENSCGRG00001006585) #30	Krt36 (ENSCGRG00001022979) #31	Krt35 (ENSCGRG00001022383) #32	Krt32 (ENSCGRG00001019573) #33	Krt31 (ENSCGRG00001020331) #35
Golden Hamster	MODERN SPECIES	882	Kcnh4 (ENSMAUG00000021037)	Rab5c (ENSMAUG00000015005)	Kat2a (ENSMAUG00000019208)	Dhx58 (ENSMAUG00000019934)	Zfp385c (ENSMAUG00000020342) #15	Nkiras2 (ENSMAUG00000015264) #16	Dnajc7 (ENSMAUG00000021058) #17	Cnp (ENSMAUG00000013752)	Odad4 (ENSMAUG00000006166) #18	Acly (ENSMAUG00000000465) #19	Klhl11 (ENSMAUG00000017249) #20	Klhl10 (ENSMAUG00000021131) #21	Nt5c3b (ENSMAUG00000015023)	Fkbp10 (ENSMAUG00000014011)	P3h4 (ENSMAUG00000017873)	Jup (ENSMAUG00000015872) #22	Hap1 (ENSMAUG00000015239) #23	Gast (ENSMAUG00000016246) #24	ENSMAUG00000008970	Krt17 (ENSMAUG00000015460) #25	Krt16 (ENSMAUG00000013514) #26	Krt14 (ENSMAUG00000014542) #27	Krt9 (ENSMAUG00000009863)	Krt19 (ENSMAUG00000001379) #28	Krt15 (ENSMAUG00000012596) #29	Krt13 (ENSMAUG00000016027) #30	Krt36 (ENSMAUG00000014666) #31	Krt35 (ENSMAUG00000013766) #32	Krt32 (ENSMAUG00000011384) #33	Krt34 (ENSMAUG00000012068) #36	ENSMAUG00000010414 ##35
Murinae	ANCESTRAL SPECIES	6	ENSGT00940000154971	ENSGT00510000049735	ENSGT00940000158799	ENSGT00940000153173.b.b	ENSGT00940000157202 #15	ENSGT00940000157943.b #16	ENSGT00940000155338 #17	ENSGT00510000048410	ENSGT00390000007911 #18	ENSGT00940000154881 #19	ENSGT00940000159275 #20	ENSGT00940000154664 #21	ENSGT00390000012959.a	ENSGT00940000156331	ENSGT00940000153814.b	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.b.t.c.b.a	ENSGT00940000163247	ENSGT00940000160681.C #25	ENSGT00940000154602.b #26	ENSGT00940000154602.a #27	ENSGT00940000162894	ENSGT00940000155258.t #28	ENSGT00940000154403.a.a #29	ENSGT00940000154403.a.b #30	ENSGT00940000161311 #31	ENSGT00940000161787 #32	ENSGT00940000161991 #33	ENSGT00940000153980.j.a.b.a.b #35
Mus	ANCESTRAL SPECIES	2	ENSGT00940000154971	ENSGT00510000049735	ENSGT00940000158799	ENSGT00940000153173.b.b	ENSGT00940000157202 #15	ENSGT00940000157943.b #16	ENSGT00940000155338 #17	ENSGT00510000048410	ENSGT00390000007911 #18	ENSGT00940000154881 #19	ENSGT00940000159275 #20	ENSGT00940000154664 #21	ENSGT00390000012959.a	ENSGT00940000156331	ENSGT00940000153814.b	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.b.t.c.b.a	ENSGT00940000163247	ENSGT00940000160681.C #25	ENSGT00940000154602.b #26	ENSGT00940000154602.a #27	ENSGT00940000162894	ENSGT00940000155258.t #28	ENSGT00940000154403.a.a #29	ENSGT00940000154403.a.b #30	ENSGT00940000161311 #31	ENSGT00940000161787 #32	ENSGT00940000161991 #33	ENSGT00940000153980.j.a.b.a.b #35
Mus_A	ANCESTRAL SPECIES	2	ENSGT00940000154971	ENSGT00510000049735	ENSGT00940000158799	ENSGT00940000153173.b.b	ENSGT00940000157202 #15	ENSGT00940000157943.b #16	ENSGT00940000155338 #17	ENSGT00510000048410	ENSGT00390000007911 #18	ENSGT00940000154881 #19	ENSGT00940000159275 #20	ENSGT00940000154664 #21	ENSGT00390000012959.a	ENSGT00940000156331	ENSGT00940000153814.b	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.b.t.c.b.a	ENSGT00940000163247	ENSGT00940000160681.C #25	ENSGT00940000154602.b #26	ENSGT00940000154602.a #27	ENSGT00940000162894	ENSGT00940000155258.t #28	ENSGT00940000154403.a.a #29	ENSGT00940000154403.a.b #30	ENSGT00940000161311 #31	ENSGT00940000161787 #32	ENSGT00940000161991 #33	ENSGT00940000153980.j.a.b.a.b #35
Mus_B	ANCESTRAL SPECIES	2	ENSGT00940000154971	ENSGT00510000049735	ENSGT00940000158799	ENSGT00940000153173.b.b	ENSGT00940000157202 #15	ENSGT00940000157943.b #16	ENSGT00940000155338 #17	ENSGT00510000048410	ENSGT00390000007911 #18	ENSGT00940000154881 #19	ENSGT00940000159275 #20	ENSGT00940000154664 #21	ENSGT00390000012959.a	ENSGT00940000156331	ENSGT00940000153814.b	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.b.t.c.b.a	ENSGT00940000163247	ENSGT00940000160681.C #25	ENSGT00940000154602.b #26	ENSGT00940000154602.a #27	ENSGT00940000162894	ENSGT00940000155258.t #28	ENSGT00940000154403.a.a #29	ENSGT00940000154403.a.b #30	ENSGT00940000161311 #31	ENSGT00940000161787 #32	ENSGT00940000161991 #33	ENSGT00940000153980.j.a.b.a.b #35
Mouse	MODERN SPECIES	2	Rab5c (ENSMUSG00000019173)	Hspb9 (ENSMUSG00000017832)	Kat2a (ENSMUSG00000020918)	Dhx58 (ENSMUSG00000017830)	Zfp385c (ENSMUSG00000014198) #15	Nkiras2 (ENSMUSG00000017837) #16	Dnajc7 (ENSMUSG00000014195) #17	Cnp (ENSMUSG00000006782)	Odad4 (ENSMUSG00000006784) #18	Acly (ENSMUSG00000020917) #19	Klhl11 (ENSMUSG00000048732) #20	Klhl10 (ENSMUSG00000001558) #21	Nt5c3b (ENSMUSG00000017176)	Fkbp10 (ENSMUSG00000001555)	P3h4 (ENSMUSG00000006931)	Jup (ENSMUSG00000001552) #22	Hap1 (ENSMUSG00000006930) #23	Gast (ENSMUSG00000017165) #24	Eif1 (ENSMUSG00000035530)	Krt42 (ENSMUSG00000053654)	Krt17 (ENSMUSG00000035557) #25	Krt16 (ENSMUSG00000053797) #26	Krt14 (ENSMUSG00000045545) #27	Krt9 (ENSMUSG00000051617)	Krt19 (ENSMUSG00000020911) #28	Krt15 (ENSMUSG00000054146) #29	Krt13 (ENSMUSG00000044041) #30	Krt36 (ENSMUSG00000020916) #31	Krt35 (ENSMUSG00000048013) #32	Krt32 (ENSMUSG00000046095) #33	Krt31 (ENSMUSG00000048981) #35
Mus_C	ANCESTRAL SPECIES	21	ENSGT00940000154971	ENSGT00510000049735	ENSGT00940000158799	ENSGT00940000153173.b.b	ENSGT00940000157202 #15	ENSGT00940000157943.b #16	ENSGT00940000155338 #17	ENSGT00510000048410	ENSGT00390000007911 #18	ENSGT00940000154881 #19	ENSGT00940000159275 #20	ENSGT00940000154664 #21	ENSGT00390000012959.a	ENSGT00940000156331	ENSGT00940000153814.b	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.b.t.c.b.a	ENSGT00940000163247	ENSGT00940000160681.C #25	ENSGT00940000154602.b.c #26	ENSGT00940000154602.a #27	ENSGT00940000162894	ENSGT00940000155258.t #28	ENSGT00940000154403.a.a #29	ENSGT00940000154403.a.b #30	ENSGT00940000161311 #31	ENSGT00940000161787 #32	ENSGT00940000161991 #33	ENSGT00940000153980.j.a.b.a.b #35
Steppe mouse	MODERN SPECIES	2508						ENSMSIG00000000293 #17	ENSMSIG00000000383	Cnp (ENSMSIG00000000414)	Odad4 (ENSMSIG00000000453) #18	Acly (ENSMSIG00000000565) #19	Klhl11 (ENSMSIG00000000730) #20	Klhl10 (ENSMSIG00000000753) #21	Nt5c3b (ENSMSIG00000000807)	Fkbp10 (ENSMSIG00000000865)	P3h4 (ENSMSIG00000000942)	Jup (ENSMSIG00000001000) #22	Hap1 (ENSMSIG00000001037) #23	Gast (ENSMSIG00000001061) #24	ENSMSIG00000001075	Krt42 (ENSMSIG00000001103)	Krt17 (ENSMSIG00000001129) #25	ENSMSIG00000001147 #26	ENSMSIG00000001184 #26	Krt14 (ENSMSIG00000001257) #27	ENSMSIG00000001354	Krt15 (ENSMSIG00000001420) #29	Krt13 (ENSMSIG00000001442) #30	Krt36 (ENSMSIG00000001468) #31	Krt35 (ENSMSIG00000001493) #32	Krt32 (ENSMSIG00000001532) #33
spretus	MODERN SPECIES	2	Rab5c (MGP_SPRETEiJ_G0018027)	Hspb9 (MGP_SPRETEiJ_G0018026)	Kat2a (MGP_SPRETEiJ_G0018025)	Dhx58 (MGP_SPRETEiJ_G0018024)	Zfp385c (MGP_SPRETEiJ_G0018023) #15	Nkiras2 (MGP_SPRETEiJ_G0018022) #16	Dnajc7 (MGP_SPRETEiJ_G0018021) #17	Cnp (MGP_SPRETEiJ_G0018020)	Odad4 (MGP_SPRETEiJ_G0018019) #18	Acly (MGP_SPRETEiJ_G0018018) #19	Klhl11 (MGP_SPRETEiJ_G0018017) #20	Klhl10 (MGP_SPRETEiJ_G0018016) #21	Nt5c3b (MGP_SPRETEiJ_G0018015)	Fkbp10 (MGP_SPRETEiJ_G0018014)	P3h4 (MGP_SPRETEiJ_G0018013)	Jup (MGP_SPRETEiJ_G0018012) #22	Hap1 (MGP_SPRETEiJ_G0018011) #23	Gast (MGP_SPRETEiJ_G0018010) #24	MGP_SPRETEiJ_G0018009	Krt42 (MGP_SPRETEiJ_G0018008)	Krt17 (MGP_SPRETEiJ_G0018007) #25	MGP_SPRETEiJ_G0018006 #26	Krt14 (MGP_SPRETEiJ_G0018005) #27	Krt9 (MGP_SPRETEiJ_G0018004)	Krt19 (MGP_SPRETEiJ_G0018003) #28	Krt15 (MGP_SPRETEiJ_G0018002) #29	Krt13 (MGP_SPRETEiJ_G0018001) #30	Krt36 (MGP_SPRETEiJ_G0018000) #31	Krt35 (MGP_SPRETEiJ_G0017999) #32	Krt32 (MGP_SPRETEiJ_G0017998) #33	Krt31 (MGP_SPRETEiJ_G0017997) #35
Ryukyu mouse	MODERN SPECIES	2	Rab5c (MGP_CAROLIEiJ_G0017184)	Hspb9 (MGP_CAROLIEiJ_G0017183)	Kat2a (MGP_CAROLIEiJ_G0017182)	Dhx58 (MGP_CAROLIEiJ_G0017181)	Zfp385c (MGP_CAROLIEiJ_G0017180) #15	Nkiras2 (MGP_CAROLIEiJ_G0017179) #16	Dnajc7 (MGP_CAROLIEiJ_G0017178) #17	Cnp (MGP_CAROLIEiJ_G0017177)	Odad4 (MGP_CAROLIEiJ_G0017176) #18	Acly (MGP_CAROLIEiJ_G0017175) #19	Klhl11 (MGP_CAROLIEiJ_G0017174) #20	Klhl10 (MGP_CAROLIEiJ_G0017173) #21	Nt5c3b (MGP_CAROLIEiJ_G0017172)	Fkbp10 (MGP_CAROLIEiJ_G0017171)	P3h4 (MGP_CAROLIEiJ_G0017170)	Jup (MGP_CAROLIEiJ_G0017169) #22	Hap1 (MGP_CAROLIEiJ_G0017168) #23	Gast (MGP_CAROLIEiJ_G0017167) #24	Krt42 (MGP_CAROLIEiJ_G0017166)	Krt17 (MGP_CAROLIEiJ_G0017165) #25	MGP_CAROLIEiJ_G0017164 #26	Krt14 (MGP_CAROLIEiJ_G0017163) #27	Krt9 (MGP_CAROLIEiJ_G0017162)	Krt19 (MGP_CAROLIEiJ_G0017161) #28	Krt15 (MGP_CAROLIEiJ_G0017160) #29	Krt13 (MGP_CAROLIEiJ_G0017159) #30	Krt36 (MGP_CAROLIEiJ_G0017158) #31	Krt35 (MGP_CAROLIEiJ_G0017157) #32	Krt32 (MGP_CAROLIEiJ_G0017156) #33	Krt31 (MGP_CAROLIEiJ_G0017155) #35	Krt34 (MGP_CAROLIEiJ_G0017154) #36
Shrew mouse	MODERN SPECIES	5	Rab5c (MGP_PahariEiJ_G0018314)	Hspb9 (MGP_PahariEiJ_G0018313)	Kat2a (MGP_PahariEiJ_G0018312)	Dhx58 (MGP_PahariEiJ_G0018311)	Zfp385c (MGP_PahariEiJ_G0018310) #15	Nkiras2 (MGP_PahariEiJ_G0018309) #16	Dnajc7 (MGP_PahariEiJ_G0018308) #17	Cnp (MGP_PahariEiJ_G0018307)	MGP_PahariEiJ_G0018306 #18	Acly (MGP_PahariEiJ_G0018305) #19	Klhl11 (MGP_PahariEiJ_G0018304) #20	Klhl10 (MGP_PahariEiJ_G0018303) #21	Nt5c3b (MGP_PahariEiJ_G0018302)	Fkbp10 (MGP_PahariEiJ_G0018301)	P3h4 (MGP_PahariEiJ_G0018300)	Jup (MGP_PahariEiJ_G0018299) #22	Hap1 (MGP_PahariEiJ_G0018298) #23	Gast (MGP_PahariEiJ_G0018297) #24	MGP_PahariEiJ_G0018296	Krt42 (MGP_PahariEiJ_G0018295)	Krt17 (MGP_PahariEiJ_G0018294) #25	MGP_PahariEiJ_G0018293 #26	Krt14 (MGP_PahariEiJ_G0018292) #27	MGP_PahariEiJ_G0018291	Krt19 (MGP_PahariEiJ_G0018290) #28	Krt15 (MGP_PahariEiJ_G0018289) #29	Krt13 (MGP_PahariEiJ_G0018288) #30	Krt36 (MGP_PahariEiJ_G0018287) #31	Krt35 (MGP_PahariEiJ_G0018286) #32	Krt32 (MGP_PahariEiJ_G0018285) #33	Krt31 (MGP_PahariEiJ_G0018284) #35
Rat	MODERN SPECIES	1	Rab5c (ENSRNOG00000018568)	Hspb9 (ENSRNOG00000036819)	Kat2a (ENSRNOG00000018364)	Dhx58 (ENSRNOG00000018247)	Zfp385c (ENSRNOG00000025370) #15	Nkiras2 (ENSRNOG00000018095) #16	Dnajc7 (ENSRNOG00000017781) #17	Cnp (ENSRNOG00000017496)	Odad4 (ENSRNOG00000017473) #18	Acly (ENSRNOG00000016924) #19	Klhl11 (ENSRNOG00000016921) #20	Klhl10 (ENSRNOG00000016749) #21	Nt5c3b (ENSRNOG00000016475)	Fkbp10 (ENSRNOG00000015941)	P3h4 (ENSRNOG00000015787)	Jup (ENSRNOG00000015380) #22	Hap1 (ENSRNOG00000014819) #23	Gast (ENSRNOG00000014740) #24	Eif1 (ENSRNOG00000033765)	Krt42 (ENSRNOG00000034087)	Krt17 (ENSRNOG00000026371) #25	Krt9 (ENSRNOG00000014370)	Krt16 (ENSRNOG00000003899) #26	Krt13 (ENSRNOG00000014070) #30	Krt36 (ENSRNOG00000031805) #31	Krt35 (ENSRNOG00000013754) #32	Krt32 (ENSRNOG00000013611) #33	Krt31 (ENSRNOG00000030344) #35	Krt34 (ENSRNOG00000051302) #36	Krt33b (ENSRNOG00000068212) ##35	Krt33a (ENSRNOG00000062912) ##35
Upper Galilee mountains blind mole rat	MODERN SPECIES	912	ENSNGAG00000010286	Kat2a (ENSNGAG00000011766)	Dhx58 (ENSNGAG00000017107)	Zfp385c (ENSNGAG00000009495) #15	Nkiras2 (ENSNGAG00000018489) #16	Dnajc7 (ENSNGAG00000014379) #17	Cnp (ENSNGAG00000006656)	Odad4 (ENSNGAG00000020605) #18	ENSNGAG00000018695	Acly (ENSNGAG00000009022) #19	Klhl11 (ENSNGAG00000020048) #20	Klhl10 (ENSNGAG00000011124) #21	Nt5c3b (ENSNGAG00000000422)	Fkbp10 (ENSNGAG00000017675)	P3h4 (ENSNGAG00000000360)	Jup (ENSNGAG00000000170) #22	ENSNGAG00000019533	Hap1 (ENSNGAG00000007898) #23	Gast (ENSNGAG00000019585) #24	Eif1 (ENSNGAG00000018937)	Krt42 (ENSNGAG00000019553)	Krt17 (ENSNGAG00000012777) #25	Krt16 (ENSNGAG00000000117) #26	Krt14 (ENSNGAG00000010672) #27	ENSNGAG00000018654	Krt19 (ENSNGAG00000011315) #28	Krt15 (ENSNGAG00000001364) #29	Krt13 (ENSNGAG00000015515) #30	Krt36 (ENSNGAG00000020685) #31	Krt35 (ENSNGAG00000019802) #32	Krt32 (ENSNGAG00000013427) #33
Lesser Egyptian jerboa	MODERN SPECIES	56	Kcnh4 (ENSJJAG00000021495)	Rab5c (ENSJJAG00000021181)	Kat2a (ENSJJAG00000021399)	Dhx58 (ENSJJAG00000000855)	Zfp385c (ENSJJAG00000020892) #15	Nkiras2 (ENSJJAG00000009448) #16	Dnajc7 (ENSJJAG00000009724) #17	Cnp (ENSJJAG00000021905)	Odad4 (ENSJJAG00000021988) #18	Acly (ENSJJAG00000023463) #19	Klhl11 (ENSJJAG00000021286) #20	Klhl10 (ENSJJAG00000023238) #21	Nt5c3b (ENSJJAG00000022142)	Fkbp10 (ENSJJAG00000021205)	P3h4 (ENSJJAG00000022678)	Jup (ENSJJAG00000021441) #22	Hap1 (ENSJJAG00000022760) #23	Gast (ENSJJAG00000021370) #24	Eif1 (ENSJJAG00000021198)	Krt42 (ENSJJAG00000022125)	Krt17 (ENSJJAG00000009622) #25	Krt16 (ENSJJAG00000022085) #26	Krt14 (ENSJJAG00000023341) #27	ENSJJAG00000022627	Krt19 (ENSJJAG00000023491) #28	Krt15 (ENSJJAG00000023216) #29	Krt13 (ENSJJAG00000002259) #30	Krt36 (ENSJJAG00000021463) #31	Krt35 (ENSJJAG00000022241) #32	Krt32 (ENSJJAG00000021346) #33	ENSJJAG00000021849 ##35
Kangaroo rat	MODERN SPECIES	326	Kcnh4 (ENSDORG00000002370)	Rab5c (ENSDORG00000006819)	Kat2a (ENSDORG00000006817)	Dhx58 (ENSDORG00000006815)	Zfp385c (ENSDORG00000001917) #15	Nkiras2 (ENSDORG00000024004) #16	Dnajc7 (ENSDORG00000001914) #17	Cnp (ENSDORG00000001913)	Odad4 (ENSDORG00000001910) #18	Acly (ENSDORG00000001906) #19	Klhl11 (ENSDORG00000001903) #20	Klhl10 (ENSDORG00000001899) #21	Nt5c3b (ENSDORG00000003263)	Fkbp10 (ENSDORG00000001100)	P3h4 (ENSDORG00000001103)	Jup (ENSDORG00000001104) #22	Hap1 (ENSDORG00000005913) #23	Gast (ENSDORG00000005917) #24	ENSDORG00000013853	Krt42 (ENSDORG00000029252)	Krt17 (ENSDORG00000016115) #25	Krt16 (ENSDORG00000016113) #26	Krt14 (ENSDORG00000029977) #27	Krt9 (ENSDORG00000026645)	Krt19 (ENSDORG00000006970) #28	Krt15 (ENSDORG00000006968) #29	Krt13 (ENSDORG00000006965) #30	Krt36 (ENSDORG00000006963) #31	Krt35 (ENSDORG00000028712) #32	Krt32 (ENSDORG00000006959) #33	Krt31 (ENSDORG00000025918) #35
Rodentia_A	ANCESTRAL SPECIES	3	ENSGT00510000049735	ENSGT00940000158799	ENSGT00940000153173.b.b	ENSGT00940000154994.b	ENSGT00940000157202 #15	ENSGT00940000157943.b #16	ENSGT00940000155338 #17	ENSGT00510000048410	ENSGT00390000007911 #18	ENSGT00940000154881 #19	ENSGT00940000159275 #20	ENSGT00940000154664 #21	ENSGT00390000012959.a	ENSGT00940000156331	ENSGT00940000153814.b	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b	ENSGT00940000163247	ENSGT00940000160681.C #25	ENSGT00940000154602.b #26	ENSGT00940000154602.a #27	ENSGT00940000162894	ENSGT00940000155258.t #28	ENSGT00940000154403.a.a #29	ENSGT00940000154403.a.b #30	ENSGT00940000161311 #31	ENSGT00940000161787 #32	ENSGT00940000161991 #33	ENSGT00940000163841 #37
Hystricomorpha	ANCESTRAL SPECIES	3	ENSGT00940000154971	ENSGT00510000049735	ENSGT00940000158799	ENSGT00940000153173.b.b	ENSGT00940000157202 #15	ENSGT00940000157943.b #16	ENSGT00940000155338 #17	ENSGT00510000048410	ENSGT00390000007911 #18	ENSGT00940000154881 #19	ENSGT00940000159275 #20	ENSGT00940000154664 #21	ENSGT00390000012959.a	ENSGT00940000156331	ENSGT00940000153814.b	ENSGT00940000156395 #22	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b	ENSGT00940000163247	ENSGT00940000160681.C #25	ENSGT00940000154602.b #26	ENSGT00940000154602.a #27	ENSGT00940000162894	ENSGT00940000155258.t #28	ENSGT00940000154403.a.a #29	ENSGT00940000154403.a.b #30	ENSGT00940000161311 #31	ENSGT00940000161787 #32	ENSGT00940000161991 #33	ENSGT00940000163426 #36	ENSGT00940000153980.j.a.a ##35
Hystricomorpha_a	ANCESTRAL SPECIES		ENSGT00940000154971	ENSGT00510000049735	ENSGT00940000158799	ENSGT00940000153173.b.b	ENSGT00940000157202 #15	ENSGT00940000157943.b #16	ENSGT00940000155338 #17	ENSGT00510000048410	ENSGT00390000007911 #18	ENSGT00940000154881 #19	ENSGT00940000159275 #20	ENSGT00940000154664 #21	ENSGT00390000012959.a	ENSGT00940000156331	ENSGT00940000153814.b	ENSGT00940000156395 #22	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b	ENSGT00940000163247	ENSGT00940000160681.C #25	ENSGT00940000154602.b #26	ENSGT00940000154602.a #27	ENSGT00940000162894	ENSGT00940000155258.t #28	ENSGT00940000154403.a.a #29	ENSGT00940000154403.a.b #30	ENSGT00940000161311 #31	ENSGT00940000161787 #32	ENSGT00940000161991 #33	ENSGT00940000153980.j.a.a ##35	ENSGT00940000163658
Hystricomorpha_b	ANCESTRAL SPECIES		ENSGT00940000154971	ENSGT00510000049735	ENSGT00940000158799	ENSGT00940000153173.b.b	ENSGT00940000157202 #15	ENSGT00940000157943.b #16	ENSGT00940000155338 #17	ENSGT00510000048410	ENSGT00390000007911 #18	ENSGT00940000154881 #19	ENSGT00940000159275 #20	ENSGT00940000154664 #21	ENSGT00390000012959.a	ENSGT00940000156331	ENSGT00940000153814.b	ENSGT00940000156395 #22	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b	ENSGT00940000163247	ENSGT00940000160681.C #25	ENSGT00940000154602.b #26	ENSGT00940000154602.a #27	ENSGT00940000162894	ENSGT00940000155258.t #28	ENSGT00940000154403.a.a #29	ENSGT00940000154403.a.b #30	ENSGT00940000161311 #31	ENSGT00940000161787 #32	ENSGT00940000161991 #33	ENSGT00940000153980.j.a.a ##35	ENSGT00940000163658
Long-tailed chinchilla	MODERN SPECIES	158	KCNH4 (ENSCLAG00000016815)	RAB5C (ENSCLAG00000016650)	KAT2A (ENSCLAG00000015084)	DHX58 (ENSCLAG00000013960)	ZNF385C (ENSCLAG00000015100) #15	NKIRAS2 (ENSCLAG00000014896) #16	DNAJC7 (ENSCLAG00000015312) #17	CNP (ENSCLAG00000015883)	ODAD4 (ENSCLAG00000014476) #18	ACLY (ENSCLAG00000014600) #19	KLHL11 (ENSCLAG00000017003) #20	KLHL10 (ENSCLAG00000017306) #21	NT5C3B (ENSCLAG00000015634)	FKBP10 (ENSCLAG00000016960)	P3H4 (ENSCLAG00000015645)	JUP (ENSCLAG00000015947) #22	GAST (ENSCLAG00000016052) #24	ENSCLAG00000015732	ENSCLAG00000015351	KRT16 (ENSCLAG00000016344) #26	KRT9 (ENSCLAG00000016583)	KRT19 (ENSCLAG00000015425) #28	KRT15 (ENSCLAG00000013658) #29	ENSCLAG00000015341 #30	ENSCLAG00000016636	ENSCLAG00000017990	KRTAP16-1 (ENSCLAG00000016554)	ENSCLAG00000015082	ENSCLAG00000017906	ENSCLAG00000015077	ENSCLAG00000015152
Degu	MODERN SPECIES	97	RAB5C (ENSODEG00000017920)	HSPB9 (ENSODEG00000018407)	KAT2A (ENSODEG00000018011)	DHX58 (ENSODEG00000017902)	ZNF385C (ENSODEG00000018049) #15	NKIRAS2 (ENSODEG00000017843) #16	DNAJC7 (ENSODEG00000017953) #17	CNP (ENSODEG00000017962)	ODAD4 (ENSODEG00000017939) #18	ACLY (ENSODEG00000018143) #19	KLHL11 (ENSODEG00000017875) #20	KLHL10 (ENSODEG00000018015) #21	NT5C3B (ENSODEG00000018081)	FKBP10 (ENSODEG00000017908)	P3H4 (ENSODEG00000017979)	JUP (ENSODEG00000017964) #22	GAST (ENSODEG00000017853) #24	EIF1 (ENSODEG00000018101)	ENSODEG00000017881	KRT17 (ENSODEG00000017862) #25	KRT16 (ENSODEG00000017857) #26	KRT14 (ENSODEG00000017873) #27	KRT9 (ENSODEG00000017935)	KRT19 (ENSODEG00000017884) #28	KRT15 (ENSODEG00000017969) #29	ENSODEG00000017822 #30	KRT36 (ENSODEG00000017942) #31	KRT35 (ENSODEG00000017892) #32	KRT32 (ENSODEG00000017895) #33	ENSODEG00000017837 ##35	ENSODEG00000017841 ##35
Guinea pig	MODERN SPECIES	53	RAB5C (ENSCPOG00000011190)	HSPB9 (ENSCPOG00000026480)	KAT2A (ENSCPOG00000040409)	DHX58 (ENSCPOG00000023721)	ZNF385C (ENSCPOG00000006417) #15	NKIRAS2 (ENSCPOG00000037805) #16	DNAJC7 (ENSCPOG00000023384) #17	CNP (ENSCPOG00000020940)	ODAD4 (ENSCPOG00000023846) #18	ACLY (ENSCPOG00000010813) #19	KLHL11 (ENSCPOG00000021621) #20	KLHL10 (ENSCPOG00000002818) #21	NT5C3B (ENSCPOG00000027400)	FKBP10 (ENSCPOG00000020998)	P3H4 (ENSCPOG00000026262)	JUP (ENSCPOG00000003295) #22	GAST (ENSCPOG00000009853) #24	ENSCPOG00000030441	KRT9 (ENSCPOG00000033124)	KRT19 (ENSCPOG00000035147) #28	KRT14 (ENSCPOG00000006839) #27	ENSCPOG00000034373 #30	KRT36 (ENSCPOG00000032028) #31	KRT35 (ENSCPOG00000030708) #32	ENSCPOG00000038800 ##35	ENSCPOG00000032896 ##35	ENSCPOG00000032218 ##35	ENSCPOG00000039793 ##35	ENSCPOG00000025665	KRTAP16-1 (ENSCPOG00000020936)	ENSCPOG00000032008
Naked mole-rat female	MODERN SPECIES	12	ENSHGLG00000032125	KAT2A (ENSHGLG00000014215)	DHX58 (ENSHGLG00000011529)	ZNF385C (ENSHGLG00000013481) #15	ENSHGLG00000034407	ENSHGLG00000039749 #16	DNAJC7 (ENSHGLG00000016992) #17	CNP (ENSHGLG00000016638)	ODAD4 (ENSHGLG00000016605) #18	ACLY (ENSHGLG00000014233) #19	KLHL11 (ENSHGLG00000037770) #20	KLHL10 (ENSHGLG00000018732) #21	NT5C3B (ENSHGLG00000015568)	FKBP10 (ENSHGLG00000016119)	P3H4 (ENSHGLG00000016255)	JUP (ENSHGLG00000019242) #22	GAST (ENSHGLG00000013252) #24	ENSHGLG00000014274	ENSHGLG00000014114	KRT17 (ENSHGLG00000014256) #25	ENSHGLG00000018762 ##29	KRT14 (ENSHGLG00000014710) #27	ENSHGLG00000017248 #30	KRT35 (ENSHGLG00000014815) #32	KRT32 (ENSHGLG00000017222) #33	ENSHGLG00000041581 ##35	KRT34 (ENSHGLG00000048614) #36	ENSHGLG00000042231 ##35	ENSHGLG00000045464 ##35	KRTAP29-1 (ENSHGLG00000047368)	ENSHGLG00000016026
Sciuridae	ANCESTRAL SPECIES	4	ENSGT00510000049735	ENSGT00940000158799	ENSGT00940000153173.b.b	ENSGT00940000154994.b	ENSGT00940000157202 #15	ENSGT00940000157943.b #16	ENSGT00940000155338 #17	ENSGT00510000048410	ENSGT00390000007911 #18	ENSGT00940000154881 #19	ENSGT00940000159275 #20	ENSGT00940000154664 #21	ENSGT00390000012959.a	ENSGT00940000156331	ENSGT00940000153814.b	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b	ENSGT00940000163247	ENSGT00940000160681.C #25	ENSGT00940000154602.b #26	ENSGT00940000154602.a #27	ENSGT00940000162894	ENSGT00940000155258.t #28	ENSGT00940000154403.a.a #29	ENSGT00950000183311	ENSGT00940000154403.a.b #30	ENSGT00940000161311 #31	ENSGT00940000161787 #32	ENSGT00940000161991 #33
Marmotini	ANCESTRAL SPECIES	8	ENSGT00510000049735	ENSGT00940000158799	ENSGT00940000153173.b.b	ENSGT00940000154994.b	ENSGT00940000157202 #15	ENSGT00940000157943.b #16	ENSGT00940000155338 #17	ENSGT00510000048410	ENSGT00390000007911 #18	ENSGT00940000154881 #19	ENSGT00940000159275 #20	ENSGT00940000154664 #21	ENSGT00390000012959.a	ENSGT00940000156331	ENSGT00940000153814.b	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b	ENSGT00940000163247	ENSGT00940000160681.C #25	ENSGT00940000154602.b #26	ENSGT00940000154602.a #27	ENSGT00940000162894	ENSGT00940000155258.t #28	ENSGT00940000154403.a.a #29	ENSGT00940000154403.a.b #30	ENSGT00940000161311 #31	ENSGT00940000161787 #32	ENSGT00940000161991 #33	ENSGT00940000153980.j.a.b.b.c.a ##35
Marmotini_b	ANCESTRAL SPECIES	5	ENSGT00510000049735	ENSGT00940000158799	ENSGT00940000153173.b.b	ENSGT00940000154994.b	ENSGT00940000157202 #15	ENSGT00940000157943.b.i #16	ENSGT00940000155338 #17	ENSGT00510000048410	ENSGT00390000007911 #18	ENSGT00940000154881 #19	ENSGT00940000159275 #20	ENSGT00940000154664 #21	ENSGT00390000012959.a	ENSGT00940000156331	ENSGT00940000153814.b	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b	ENSGT00940000163247	ENSGT00940000160681.C #25	ENSGT00940000154602.b #26	ENSGT00940000154602.a #27	ENSGT00940000162894	ENSGT00940000155258.t #28	ENSGT00940000154403.a.a #29	ENSGT00940000154403.a.b #30	ENSGT00940000161311 #31	ENSGT00940000161787 #32	ENSGT00940000161991 #33	ENSGT00940000153980.j.a.b.b.c.a ##35
Arctic ground squirrel	MODERN SPECIES	46	HSPB9 (ENSUPAG00010009527)	KAT2A (ENSUPAG00010009504)	DHX58 (ENSUPAG00010009486)	C17orf113 (ENSUPAG00010009476)	ZNF385C (ENSUPAG00010009440) #15	NKIRAS2 (ENSUPAG00010009426) #16	DNAJC7 (ENSUPAG00010009401) #17	CNP (ENSUPAG00010009395)	ODAD4 (ENSUPAG00010009389) #18	ACLY (ENSUPAG00010009305) #19	KLHL11 (ENSUPAG00010009300) #20	KLHL10 (ENSUPAG00010009288) #21	NT5C3B (ENSUPAG00010009269)	FKBP10 (ENSUPAG00010009227)	P3H4 (ENSUPAG00010009210)	JUP (ENSUPAG00010009167) #22	HAP1 (ENSUPAG00010009150) #23	GAST (ENSUPAG00010009145) #24	ENSUPAG00010009142	ENSUPAG00010009125	KRT17 (ENSUPAG00010009109) #25	KRT16 (ENSUPAG00010009069) #26	KRT14 (ENSUPAG00010009018) #27	KRT9 (ENSUPAG00010009000)	KRT19 (ENSUPAG00010008984) #28	KRT15 (ENSUPAG00010008970) #29	ENSUPAG00010008946 #30	KRT36 (ENSUPAG00010008919) #31	KRT35 (ENSUPAG00010008898) #32	KRT32 (ENSUPAG00010008877) #33	ENSUPAG00010008855 ##35
Squirrel	MODERN SPECIES	90	HSPB9 (ENSSTOG00000006602)	RAB5C (ENSSTOG00000006620)	KAT2A (ENSSTOG00000006556)	DHX58 (ENSSTOG00000006524)	ZNF385C (ENSSTOG00000020287) #15	ENSSTOG00000006159 #16	DNAJC7 (ENSSTOG00000006122) #17	CNP (ENSSTOG00000006116)	ODAD4 (ENSSTOG00000006075) #18	ACLY (ENSSTOG00000006029) #19	KLHL11 (ENSSTOG00000026300) #20	KLHL10 (ENSSTOG00000005983) #21	NT5C3B (ENSSTOG00000005969)	FKBP10 (ENSSTOG00000005956)	P3H4 (ENSSTOG00000028974)	JUP (ENSSTOG00000005910) #22	HAP1 (ENSSTOG00000020475) #23	GAST (ENSSTOG00000005906) #24	EIF1 (ENSSTOG00000002719)	ENSSTOG00000024700	KRT16 (ENSSTOG00000014410) #26	KRT19 (ENSSTOG00000014403) #28	KRT15 (ENSSTOG00000014415) #29	ENSSTOG00000014393 #30	KRT36 (ENSSTOG00000014383) #31	KRT35 (ENSSTOG00000034016) #32	KRT32 (ENSSTOG00000014374) #33	ENSSTOG00000034013 ##35	ENSSTOG00000013178 ##35	ENSSTOG00000033523 ##35	ENSSTOG00000013195 ##35
Alpin marmot	MODERN SPECIES	42	KCNH4 (ENSMMMG00000006041)	RAB5C (ENSMMMG00000006088)	KAT2A (ENSMMMG00000006120)	DHX58 (ENSMMMG00000006156)	ZNF385C (ENSMMMG00000006176) #15	ENSMMMG00000006193 #16	DNAJC7 (ENSMMMG00000006215) #17	CNP (ENSMMMG00000006240)	ENSMMMG00000006244 #18	ENSMMMG00000006252 #18	ACLY (ENSMMMG00000006262) #19	KLHL11 (ENSMMMG00000006432) #20	KLHL10 (ENSMMMG00000006440) #21	NT5C3B (ENSMMMG00000006451)	FKBP10 (ENSMMMG00000006462)	JUP (ENSMMMG00000006521) #22	HAP1 (ENSMMMG00000006582) #23	GAST (ENSMMMG00000006600) #24	ENSMMMG00000006606	ENSMMMG00000006617	KRT17 (ENSMMMG00000006626) #25	KRT16 (ENSMMMG00000006635) #26	KRT14 (ENSMMMG00000006660) #27	KRT9 (ENSMMMG00000006665)	KRT19 (ENSMMMG00000006685) #28	KRT15 (ENSMMMG00000006700) #29	ENSMMMG00000006714 #30	KRT36 (ENSMMMG00000006729) #31	KRT35 (ENSMMMG00000006741) #32	KRT32 (ENSMMMG00000006755) #33	ENSMMMG00000006764 ##35
Eurasian red squirrel	MODERN SPECIES	12	HSPB9 (ENSSVLG00005000293)	KAT2A (ENSSVLG00005000319)	DHX58 (ENSSVLG00005000354)	ZNF385C (ENSSVLG00005000419) #15	C17orf113 (ENSSVLG00005000459)	ENSSVLG00005000476 #16	ENSSVLG00005000498 #17	CNP (ENSSVLG00005000524)	ODAD4 (ENSSVLG00005000556) #18	ACLY (ENSSVLG00005000630) #19	KLHL11 (ENSSVLG00005000699) #20	KLHL10 (ENSSVLG00005000723) #21	NT5C3B (ENSSVLG00005000754)	FKBP10 (ENSSVLG00005000785)	P3H4 (ENSSVLG00005000841)	JUP (ENSSVLG00005000914) #22	ENSSVLG00005001006	ENSSVLG00005001022	HAP1 (ENSSVLG00005001065) #23	ENSSVLG00005001138	GAST (ENSSVLG00005001171) #24	EIF1 (ENSSVLG00005001188)	ENSSVLG00005001226	KRT17 (ENSSVLG00005001282) #25	KRT16 (ENSSVLG00005001321) #26	KRT14 (ENSSVLG00005001357) #27	ENSSVLG00005001389	KRT19 (ENSSVLG00005001412) #28	KRT15 (ENSSVLG00005001448) #29	KRT13 (ENSSVLG00005001499)	KRT36 (ENSSVLG00005001573) #31
Tree shrew	MODERN SPECIES	3947																JUP (ENSTBEG00000007076) #22	ENSTBEG00000006946 #23	ENSTBEG00000006930