Tetrapoda	ANCESTRAL SPECIES	21	ENSGT00670000098179	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000157202 #10	ENSGT00950000182812.A	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c #25	ENSGT00950000182969.B.c.a.a.c	ENSGT00940000155258 #31	ENSGT00940000154403 #32	ENSGT00950000183311 #33	ENSGT00940000161311 #34	ENSGT00940000161077	ENSGT00950000182969.B.d	ENSGT00950000182969.B.c.a.a.d	ENSGT00940000159382	ENSGT00940000159655	ENSGT00390000003628.b	ENSGT01030000234667.a.a.a.a.b
Amniota	ANCESTRAL SPECIES	14	ENSGT00670000098179	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00950000182812.A	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c #25	ENSGT00950000182969.B.c.a.a.c	ENSGT00940000155258.t ##31	ENSGT00940000154403.b ##32	ENSGT00940000154403.a.a #32	ENSGT00950000183311 #33	ENSGT00940000161311 #34	ENSGT00940000161077	ENSGT00940000161855	ENSGT00940000159382	ENSGT00940000160849	ENSGT00940000161783	ENSGT00940000159655
Mammalia	ANCESTRAL SPECIES	12	ENSGT00940000154971	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00950000182812.A	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c #25	ENSGT00940000163247	ENSGT00940000154602 #29	ENSGT00940000162894 #30	ENSGT00940000154403.a.b ##32	ENSGT00940000160681.C ##27	ENSGT00940000162088	ENSGT00940000153980	ENSGT00940000163841	ENSGT00940000154403.a.a #32	ENSGT00950000183311 #33	ENSGT00940000161311 #34	ENSGT00940000156135
Theria	ANCESTRAL SPECIES	9	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00950000182812.A	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602 #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000163444 #37	ENSGT00940000162088
Eutheria	ANCESTRAL SPECIES	4	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00950000182812.A	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000154403.a.b ##32	ENSGT00940000160681.C ##27	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00950000183311 #33	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36
Boreoeutheria	ANCESTRAL SPECIES	4	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00950000182812.A	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.b ##25	ENSGT00900000143461 #26	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000154602.b #28	ENSGT00940000162894 #30	ENSGT00940000154403.a.b ##32	ENSGT00940000160681.C ##27	ENSGT00940000154602.a #29	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00950000183311 #33	ENSGT00940000161311 #34
Euarchontoglires	ANCESTRAL SPECIES	4	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00950000182812.A	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.b ##25	ENSGT00900000143461 #26	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35
Primates	ANCESTRAL SPECIES	3	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00950000182812.A	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.d.b.b ##25	ENSGT00900000143461 #26	ENSGT00390000015789.c.a.b #25	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36
Haplorrhini	ANCESTRAL SPECIES	6	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.d.b.b ##25	ENSGT00900000143461 #26	ENSGT00390000015789.c.a.b #25	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36
Simiiformes	ANCESTRAL SPECIES	7	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.d.b.b ##25	ENSGT00900000143461 #26	ENSGT00390000015789.c.a.b #25	ENSGT00940000160681.A ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.s.a ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36
Catarrhini	ANCESTRAL SPECIES	8	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00910000147701	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.d.b.b ##25	ENSGT00900000143461 #26	ENSGT00390000015789.c.a.b #25	ENSGT00940000160681.A ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.s.b #31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36
Hominoidea	ANCESTRAL SPECIES	13	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00910000147701	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000160681.B #27	ENSGT00940000154602.b.a #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.s.b #31	ENSGT00940000154403.a.a #32	ENSGT00950000183311 #33	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000163444.d #37	ENSGT00940000163444.c ##37
Hominidae	ANCESTRAL SPECIES	16	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00910000147701	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000160681.B #27	ENSGT00940000154602.b.a #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.s.b #31	ENSGT00940000154403.a.a #32	ENSGT00950000183311 #33	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000163444.d #37	ENSGT00940000163444.c ##37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	1	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00910000147701	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000160681.B #27	ENSGT00940000154602.b.a #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.s.b #31	ENSGT00940000154403.a.a #32	ENSGT00950000183311 #33	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000163444.d #37	ENSGT00940000163444.c ##37
Homo/Pan group	ANCESTRAL SPECIES	2	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00910000147701	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000160681.B #27	ENSGT00940000154602.b.a #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.s.b #31	ENSGT00940000154403.a.a #32	ENSGT00950000183311 #33	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000163444.d #37	ENSGT00940000163444.c ##37
Pan	ANCESTRAL SPECIES	3	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00910000147701	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000160681.B #27	ENSGT00940000154602.b.a #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.s.b #31	ENSGT00940000154403.a.a #32	ENSGT00950000183311 #33	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000163444.d #37	ENSGT00940000163444.c ##37
Chimpanzee	MODERN SPECIES	8	HSPB9 (ENSPTRG00000030948) #7	KAT2A (ENSPTRG00000009192) #8	DHX58 (ENSPTRG00000009191) #9	ZNF385C (ENSPTRG00000009190) #10	C17H17orf113 (ENSPTRG00000046977) #11	NKIRAS2 (ENSPTRG00000009189) #12	DNAJC7 (ENSPTRG00000009188) #13	CNP (ENSPTRG00000009187) #14	ODAD4 (ENSPTRG00000030946) #15	ACLY (ENSPTRG00000023148) #16	KLHL11 (ENSPTRG00000009183) #17	KLHL10 (ENSPTRG00000009182) #18	NT5C3B (ENSPTRG00000009181) #19	FKBP10 (ENSPTRG00000009180) #20	P3H4 (ENSPTRG00000009179) #21	JUP (ENSPTRG00000009178) #22	HAP1 (ENSPTRG00000009177) #23	GAST (ENSPTRG00000009176) #24	EIF1 (ENSPTRG00000009175) #25	ENSPTRG00000047091 #26	KRT17 (ENSPTRG00000009173) #27	KRT16 (ENSPTRG00000009171) #28	KRT14 (ENSPTRG00000009172) #29	KRT9 (ENSPTRG00000009169) #30	KRT19 (ENSPTRG00000009168) #31	KRT15 (ENSPTRG00000009167) #32	KRT13 (ENSPTRG00000009166) #33	KRT36 (ENSPTRG00000009165) #34	KRT35 (ENSPTRG00000023885) #35	KRT32 (ENSPTRG00000009164) #36	KRT38 (ENSPTRG00000009163) #37
Bonobo	MODERN SPECIES	8	HSPB9 (ENSPPAG00000005052) #7	KAT2A (ENSPPAG00000041529) #8	DHX58 (ENSPPAG00000031118) #9	ZNF385C (ENSPPAG00000042977) #10	C17orf113 (ENSPPAG00000032366) #11	NKIRAS2 (ENSPPAG00000017742) #12	DNAJC7 (ENSPPAG00000031963) #13	ENSPPAG00000011268	CNP (ENSPPAG00000041028) #14	ODAD4 (ENSPPAG00000034013) #15	ACLY (ENSPPAG00000027072) #16	KLHL11 (ENSPPAG00000030884) #17	KLHL10 (ENSPPAG00000031496) #18	NT5C3B (ENSPPAG00000036201) #19	FKBP10 (ENSPPAG00000028890) #20	JUP (ENSPPAG00000040955) #22	HAP1 (ENSPPAG00000028111) #23	GAST (ENSPPAG00000030298) #24	EIF1 (ENSPPAG00000035240) #25	KRT17 (ENSPPAG00000038385) #27	KRT16 (ENSPPAG00000037025) #28	KRT14 (ENSPPAG00000043292) #29	KRT9 (ENSPPAG00000034094) #30	KRT19 (ENSPPAG00000031096) #31	KRT15 (ENSPPAG00000041916) #32	KRT13 (ENSPPAG00000010206) #33	KRT36 (ENSPPAG00000038948) #34	KRT35 (ENSPPAG00000032332) #35	KRT32 (ENSPPAG00000014018) #36	KRT38 (ENSPPAG00000031330) #37	KRT37 (ENSPPAG00000000108) ##37
Human	MODERN SPECIES	8	ENSG00000267261	KAT2A (ENSG00000108773) #8	DHX58 (ENSG00000108771) #9	C17orf113 (ENSG00000267221) #11	ZNF385C (ENSG00000187595) #10	NKIRAS2 (ENSG00000168256) #12	DNAJC7 (ENSG00000168259) #13	CNP (ENSG00000173786) #14	ODAD4 (ENSG00000204815) #15	ACLY (ENSG00000131473) #16	KLHL11 (ENSG00000178502) #17	KLHL10 (ENSG00000161594) #18	NT5C3B (ENSG00000141698) #19	FKBP10 (ENSG00000141756) #20	P3H4 (ENSG00000141696) #21	JUP (ENSG00000173801) #22	HAP1 (ENSG00000173805) #23	GAST (ENSG00000184502) #24	EIF1 (ENSG00000173812) #25	KRT17 (ENSG00000128422) #27	KRT16 (ENSG00000186832) #28	KRT14 (ENSG00000186847) #29	KRT9 (ENSG00000171403) #30	KRT19 (ENSG00000171345) #31	KRT15 (ENSG00000171346) #32	KRT13 (ENSG00000171401) #33	KRT36 (ENSG00000126337) #34	KRT35 (ENSG00000197079) #35	KRT32 (ENSG00000108759) #36	KRT38 (ENSG00000171360) #37	KRT37 (ENSG00000108417) ##37
Gorilla	MODERN SPECIES	18	KAT2A (ENSGGOG00000005463) #8	DHX58 (ENSGGOG00000005458) #9	ZNF385C (ENSGGOG00000013170) #10	C17orf113 (ENSGGOG00000036804) #11	NKIRAS2 (ENSGGOG00000001000) #12	DNAJC7 (ENSGGOG00000010230) #13	CNP (ENSGGOG00000038251) #14	ENSGGOG00000039284	ODAD4 (ENSGGOG00000003581) #15	ACLY (ENSGGOG00000003570) #16	KLHL11 (ENSGGOG00000003568) #17	KLHL10 (ENSGGOG00000010132) #18	NT5C3B (ENSGGOG00000010128) #19	FKBP10 (ENSGGOG00000010119) #20	P3H4 (ENSGGOG00000010113) #21	JUP (ENSGGOG00000010104) #22	ENSGGOG00000012786 #23	GAST (ENSGGOG00000016628) #24	EIF1 (ENSGGOG00000027201) #25	KRT17 (ENSGGOG00000037892) #27	KRT16 (ENSGGOG00000012807) #28	KRT14 (ENSGGOG00000005328) #29	ENSGGOG00000005324 #30	KRT19 (ENSGGOG00000016901) #31	KRT15 (ENSGGOG00000040448) #32	KRT13 (ENSGGOG00000016882) #33	KRT36 (ENSGGOG00000016873) #34	KRT35 (ENSGGOG00000016868) #35	KRT32 (ENSGGOG00000016863) #36	KRT38 (ENSGGOG00000016860) #37	ENSGGOG00000008460
Orangutan	MODERN SPECIES	8	RAB5C (ENSPPYG00000008398)	KAT2A (ENSPPYG00000030788) #8	DHX58 (ENSPPYG00000029982) #9	C17orf113 (ENSPPYG00000038345) #11	ZNF385C (ENSPPYG00000008400) #10	NKIRAS2 (ENSPPYG00000008401) #12	DNAJC7 (ENSPPYG00000008402) #13	CNP (ENSPPYG00000008403) #14	ODAD4 (ENSPPYG00000008404) #15	ACLY (ENSPPYG00000029534) #16	KLHL11 (ENSPPYG00000008405) #17	KLHL10 (ENSPPYG00000008406) #18	NT5C3B (ENSPPYG00000008407) #19	FKBP10 (ENSPPYG00000008408) #20	P3H4 (ENSPPYG00000008409) #21	JUP (ENSPPYG00000008410) #22	HAP1 (ENSPPYG00000008411) #23	ENSPPYG00000008412 #24	EIF1 (ENSPPYG00000034100) #25	KRT17 (ENSPPYG00000029883) #27	KRT16 (ENSPPYG00000008415) #28	KRT14 (ENSPPYG00000034823) #29	KRT9 (ENSPPYG00000008965) #30	KRT19 (ENSPPYG00000008416) #31	KRT15 (ENSPPYG00000008417) #32	KRT13 (ENSPPYG00000008969) #33	KRT36 (ENSPPYG00000008418) #34	KRT35 (ENSPPYG00000008419) #35	KRT32 (ENSPPYG00000008420) #36	KRT38 (ENSPPYG00000008421) #37	KRT37 (ENSPPYG00000008423) ##37
Gibbon	MODERN SPECIES	106	ENSNLEG00000011357 #8	DHX58 (ENSNLEG00000026691) #9	C17orf113 (ENSNLEG00000036322) #11	ZNF385C (ENSNLEG00000011345) #10	NKIRAS2 (ENSNLEG00000011319) #12	DNAJC7 (ENSNLEG00000011230) #13	ENSNLEG00000033596	CNP (ENSNLEG00000011217) #14	ODAD4 (ENSNLEG00000011200) #15	ACLY (ENSNLEG00000011182) #16	KLHL11 (ENSNLEG00000011177) #17	KLHL10 (ENSNLEG00000011166) #18	NT5C3B (ENSNLEG00000011106) #19	FKBP10 (ENSNLEG00000011092) #20	P3H4 (ENSNLEG00000011079) #21	JUP (ENSNLEG00000011062) #22	HAP1 (ENSNLEG00000011052) #23	GAST (ENSNLEG00000011040) #24	EIF1 (ENSNLEG00000011013) #25	KRT17 (ENSNLEG00000010943) #27	KRT16 (ENSNLEG00000010909) #28	ENSNLEG00000010904 ##29	KRT14 (ENSNLEG00000010819) #29	ENSNLEG00000010814 #30	KRT19 (ENSNLEG00000010787) #31	KRT15 (ENSNLEG00000010758) #32	ENSNLEG00000010740 ##32	KRT36 (ENSNLEG00000010723) #34	KRT35 (ENSNLEG00000010711) #35	KRT32 (ENSNLEG00000010704) #36	KRT38 (ENSNLEG00000010683) #37
Cercopithecidae	ANCESTRAL SPECIES	6	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00910000147701	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.d.b.b ##25	ENSGT00900000143461 #26	ENSGT00390000015789.c.a.b #25	ENSGT00940000160681.A ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.s.b.a.a #31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36
Cercopithecinae	ANCESTRAL SPECIES	4	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00910000147701	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.d.b.b ##25	ENSGT00900000143461 #26	ENSGT00390000015789.c.a.b #25	ENSGT00940000160681.A ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.s.b.a.a #31	ENSGT00940000155258.s.b.a.b #31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35
Vervet Monkey	MODERN SPECIES	7	HSPB9 (ENSCSAG00000019025) #7	KAT2A (ENSCSAG00000003097) #8	DHX58 (ENSCSAG00000003082) #9	C17orf113 (ENSCSAG00000003078) #11	ZNF385C (ENSCSAG00000003074) #10	NKIRAS2 (ENSCSAG00000003069) #12	DNAJC7 (ENSCSAG00000003065) #13	CNP (ENSCSAG00000003059) #14	ODAD4 (ENSCSAG00000003055) #15	ACLY (ENSCSAG00000003049) #16	KLHL11 (ENSCSAG00000003041) #17	KLHL10 (ENSCSAG00000003036) #18	NT5C3B (ENSCSAG00000003031) #19	FKBP10 (ENSCSAG00000003026) #20	P3H4 (ENSCSAG00000003021) #21	JUP (ENSCSAG00000003017) #22	GAST (ENSCSAG00000003011) #24	ENSCSAG00000003007 ##25	ENSCSAG00000003005 ##27	KRT16 (ENSCSAG00000003001) #28	KRT14 (ENSCSAG00000003000) #29	KRT9 (ENSCSAG00000002997) #30	KRT19 (ENSCSAG00000002992) #31	KRT15 (ENSCSAG00000002987) #32	ENSCSAG00000002983 ##32	KRT36 (ENSCSAG00000002979) #34	KRT35 (ENSCSAG00000002967) #35	KRT32 (ENSCSAG00000002953) #36	KRT38 (ENSCSAG00000002941) #37	KRT37 (ENSCSAG00000002934) ##37	ENSCSAG00000002929
Cercopithecinae_a	ANCESTRAL SPECIES	4	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00910000147701	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.d.b.b ##25	ENSGT00900000143461 #26	ENSGT00390000015789.c.a.b #25	ENSGT00940000160681.A ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.s.b.a.a #31	ENSGT00940000155258.s.b.a.b #31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35
Macaca	ANCESTRAL SPECIES	4	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00910000147701	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.s.b.a.a #31	ENSGT00940000155258.s.a.b ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000163444.d #37	ENSGT00940000163444.c ##37
Macaca_a	ANCESTRAL SPECIES	4	ENSGT00940000154971	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00390000014792 #24	ENSGT00390000015789.d.b.b ##25	ENSGT00940000154602.b #28	ENSGT00940000162894 #30	ENSGT00940000155258.s.b.a.a #31	ENSGT00940000154403.a.b ##32	ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.a.b.a.a.a.a.b.d	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000163444.d #37	ENSGT00940000163444.c ##37	ENSGT00940000163841.d	ENSGT00940000153980.j.c	ENSGT00940000163426
Crab-eating macaque	MODERN SPECIES	7	KAT2A (ENSMFAG00000040507) #8	DHX58 (ENSMFAG00000034530) #9	C17orf113 (ENSMFAG00000052896) #11	ZNF385C (ENSMFAG00000044338) #10	NKIRAS2 (ENSMFAG00000031841) #12	DNAJC7 (ENSMFAG00000031935) #13	CNP (ENSMFAG00000000621) #14	ODAD4 (ENSMFAG00000003792) #15	ENSMFAG00000051977	ACLY (ENSMFAG00000001561) #16	KLHL11 (ENSMFAG00000002946) #17	KLHL10 (ENSMFAG00000036160) #18	NT5C3B (ENSMFAG00000001374) #19	FKBP10 (ENSMFAG00000044293) #20	P3H4 (ENSMFAG00000004585) #21	JUP (ENSMFAG00000034238) #22	GAST (ENSMFAG00000054356) #24	ENSMFAG00000039233 ##25	ENSMFAG00000063606	KRT9 (ENSMFAG00000044683) #30	KRT19 (ENSMFAG00000003391) #31	KRT16 (ENSMFAG00000039227) #28	ENSMFAG00000032417 ##32	ENSMFAG00000055327	KRT36 (ENSMFAG00000038005) #34	KRT35 (ENSMFAG00000000514) #35	KRT32 (ENSMFAG00000041780) #36	KRT38 (ENSMFAG00000065364) #37	KRT37 (ENSMFAG00000062223) ##37	ENSMFAG00000008150	KRT34 (ENSMFAG00000038441)
Rhesus	MODERN SPECIES	7	DHX58 (ENSMMUG00000014755) #9	C16H17orf113 (ENSMMUG00000049440) #11	ZNF385C (ENSMMUG00000003894) #10	NKIRAS2 (ENSMMUG00000014275) #12	DNAJC7 (ENSMMUG00000016118) #13	CNP (ENSMMUG00000016114) #14	ODAD4 (ENSMMUG00000021753) #15	ENSMMUG00000050062	ACLY (ENSMMUG00000018931) #16	KLHL11 (ENSMMUG00000005962) #17	KLHL10 (ENSMMUG00000005961) #18	NT5C3B (ENSMMUG00000013056) #19	FKBP10 (ENSMMUG00000013054) #20	P3H4 (ENSMMUG00000013051) #21	ENSMMUG00000050097	JUP (ENSMMUG00000013048) #22	GAST (ENSMMUG00000063004) #24	ENSMMUG00000049151 ##25	KRT9 (ENSMMUG00000008543) #30	KRT19 (ENSMMUG00000018653) #31	KRT16 (ENSMMUG00000009895) #28	ENSMMUG00000040413 ##32	ENSMMUG00000059862	KRT36 (ENSMMUG00000018646) #34	KRT35 (ENSMMUG00000018645) #35	KRT32 (ENSMMUG00000018644) #36	KRT38 (ENSMMUG00000049208) #37	KRT37 (ENSMMUG00000018643) ##37	KRT31 (ENSMMUG00000064317)	KRT34 (ENSMMUG00000010754)	KRT33B (ENSMMUG00000052534)
Pig-tailed macaque	MODERN SPECIES	494	KAT2A (ENSMNEG00000035340) #8	DHX58 (ENSMNEG00000043994) #9	ZNF385C (ENSMNEG00000045282) #10	C17orf113 (ENSMNEG00000034865) #11	NKIRAS2 (ENSMNEG00000038475) #12	ENSMNEG00000032585 #13	ENSMNEG00000041930	CNP (ENSMNEG00000035343) #14	ODAD4 (ENSMNEG00000039183) #15	ACLY (ENSMNEG00000035847) #16	KLHL11 (ENSMNEG00000031885) #17	KLHL10 (ENSMNEG00000042555) #18	NT5C3B (ENSMNEG00000035716) #19	FKBP10 (ENSMNEG00000033649) #20	P3H4 (ENSMNEG00000041698) #21	JUP (ENSMNEG00000036253) #22	HAP1 (ENSMNEG00000035755) #23	GAST (ENSMNEG00000041907) #24	EIF1 (ENSMNEG00000003695) #25	KRT14 (ENSMNEG00000043951) #29	KRT16 (ENSMNEG00000033870) #28	KRT9 (ENSMNEG00000040688) #30	ENSMNEG00000033600 ##31	KRT15 (ENSMNEG00000029627) #32	ENSMNEG00000032411 ##32	KRT36 (ENSMNEG00000044545) #34	KRT35 (ENSMNEG00000039878) #35	KRT32 (ENSMNEG00000045031) #36	KRT38 (ENSMNEG00000000012) #37	KRT37 (ENSMNEG00000035120) ##37	ENSMNEG00000038095
Cercopithecinae_b	ANCESTRAL SPECIES	20	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00910000147701	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00900000143461 #26	ENSGT00390000015789.c.a.b #25	ENSGT00940000160681.A ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.s.b.a.b #31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000163444.d #37
Olive baboon	MODERN SPECIES	8	HSPB9 (ENSPANG00000038062) #7	KAT2A (ENSPANG00000021453) #8	DHX58 (ENSPANG00000021475) #9	C17orf113 (ENSPANG00000032940) #11	ZNF385C (ENSPANG00000021483) #10	NKIRAS2 (ENSPANG00000029487) #12	DNAJC7 (ENSPANG00000021481) #13	CNP (ENSPANG00000021479) #14	ODAD4 (ENSPANG00000021478) #15	ACLY (ENSPANG00000021526) #16	KLHL11 (ENSPANG00000021524) #17	KLHL10 (ENSPANG00000021523) #18	NT5C3B (ENSPANG00000021521) #19	FKBP10 (ENSPANG00000021520) #20	P3H4 (ENSPANG00000021519) #21	JUP (ENSPANG00000021517) #22	GAST (ENSPANG00000021514) #24	EIF1 (ENSPANG00000021513) #25	ENSPANG00000021533 ##27	KRT16 (ENSPANG00000021539) #28	KRT14 (ENSPANG00000021537) #29	KRT9 (ENSPANG00000041676) #30	ENSPANG00000037164	ENSPANG00000032314 #31	ENSPANG00000021550 ##32	KRT35 (ENSPANG00000021556) #35	KRT32 (ENSPANG00000021554) #36	ENSPANG00000021551	KRT34 (ENSPANG00000021557)	KRT33B (ENSPANG00000039315)	KRT33A (ENSPANG00000021574)
Cercopithecinae_d	ANCESTRAL SPECIES	7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00910000147701	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00900000143461 #26	ENSGT00390000015789.c.a.b #25	ENSGT00940000160681.A ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.s.b.a.b #31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000163444.d #37
Sooty mangabey	MODERN SPECIES	564	KAT2A (ENSCATG00000043639) #8	DHX58 (ENSCATG00000043180) #9	C17orf113 (ENSCATG00000026023) #11	ZNF385C (ENSCATG00000044775) #10	NKIRAS2 (ENSCATG00000044320) #12	DNAJC7 (ENSCATG00000033841) #13	CNP (ENSCATG00000034358) #14	ODAD4 (ENSCATG00000033342) #15	ENSCATG00000042719	ACLY (ENSCATG00000035374) #16	KLHL11 (ENSCATG00000041626) #17	KLHL10 (ENSCATG00000005970) #18	NT5C3B (ENSCATG00000041710) #19	FKBP10 (ENSCATG00000034458) #20	P3H4 (ENSCATG00000032032) #21	JUP (ENSCATG00000030228) #22	HAP1 (ENSCATG00000012503) #23	GAST (ENSCATG00000042229) #24	ENSCATG00000040409 #26	EIF1 (ENSCATG00000040397) #25	KRT14 (ENSCATG00000041183) #29	KRT9 (ENSCATG00000038671) #30	KRT19 (ENSCATG00000031681) #31	KRT15 (ENSCATG00000044034) #32	ENSCATG00000003532 ##32	KRT36 (ENSCATG00000044543) #34	KRT35 (ENSCATG00000044302) #35	KRT32 (ENSCATG00000000009) #36	KRT38 (ENSCATG00000041322) #37	KRT37 (ENSCATG00000043810) ##37	ENSCATG00000013757
Drill	MODERN SPECIES	1283	KAT2A (ENSMLEG00000038575) #8	DHX58 (ENSMLEG00000042616) #9	ZNF385C (ENSMLEG00000039465) #10	C17orf113 (ENSMLEG00000032203) #11	NKIRAS2 (ENSMLEG00000009134) #12	DNAJC7 (ENSMLEG00000008578) #13	ENSMLEG00000031077	CNP (ENSMLEG00000043126) #14	ODAD4 (ENSMLEG00000043448) #15	ACLY (ENSMLEG00000044346) #16	KLHL11 (ENSMLEG00000039765) #17	KLHL10 (ENSMLEG00000034366) #18	NT5C3B (ENSMLEG00000041940) #19	FKBP10 (ENSMLEG00000043284) #20	P3H4 (ENSMLEG00000038089) #21	JUP (ENSMLEG00000031175) #22	HAP1 (ENSMLEG00000010153) #23	EIF1 (ENSMLEG00000033362) #25	ENSMLEG00000033141 ##27	KRT16 (ENSMLEG00000043641) #28	KRT14 (ENSMLEG00000040314) #29	KRT9 (ENSMLEG00000026289) #30	KRT19 (ENSMLEG00000028531) #31	KRT15 (ENSMLEG00000041020) #32	ENSMLEG00000041325 ##32	KRT36 (ENSMLEG00000042997) #34	KRT35 (ENSMLEG00000038259) #35	KRT32 (ENSMLEG00000016779) #36	KRT38 (ENSMLEG00000035398) #37	KRT37 (ENSMLEG00000031244) ##37	ENSMLEG00000034859
Rhinopithecus	ANCESTRAL SPECIES	27	ENSGT00910000147867	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881.j #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.s.b.a.a #31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000163444.d #37	ENSGT00940000163444.c ##37	ENSGT00940000162088
Golden snub-nosed monkey	MODERN SPECIES	744	ENSRROG00000027160	KAT2A (ENSRROG00000037766) #8	DHX58 (ENSRROG00000035891) #9	ZNF385C (ENSRROG00000034452) #10	C17orf113 (ENSRROG00000039440) #11	NKIRAS2 (ENSRROG00000030515) #12	DNAJC7 (ENSRROG00000029257) #13	CNP (ENSRROG00000029955) #14	ODAD4 (ENSRROG00000043702) #15	ACLY (ENSRROG00000045153) #16	KLHL11 (ENSRROG00000036397) #17	KLHL10 (ENSRROG00000032058) #18	NT5C3B (ENSRROG00000042794) #19	FKBP10 (ENSRROG00000000421) #20	P3H4 (ENSRROG00000036113) #21	JUP (ENSRROG00000035659) #22	HAP1 (ENSRROG00000003100) #23	GAST (ENSRROG00000043365) #24	EIF1 (ENSRROG00000033015) #25	ENSRROG00000029637 ##27
Black snub-nosed monkey	MODERN SPECIES	638							ZNF813 (ENSRBIG00000044939)	ZNF331 (ENSRBIG00000027427)	DPRX (ENSRBIG00000037069)	ENSRBIG00000012936 #16	KLHL11 (ENSRBIG00000032227) #17	KLHL10 (ENSRBIG00000037914) #18	NT5C3B (ENSRBIG00000042156) #19	FKBP10 (ENSRBIG00000035547) #20	P3H4 (ENSRBIG00000028375) #21	JUP (ENSRBIG00000033194) #22	HAP1 (ENSRBIG00000025280) #23	GAST (ENSRBIG00000034328) #24	EIF1 (ENSRBIG00000029738) #25	KRT14 (ENSRBIG00000035212) #29	KRT16 (ENSRBIG00000039275) #28	ENSRBIG00000040974	KRT9 (ENSRBIG00000030289) #30	ENSRBIG00000031457 #31	KRT15 (ENSRBIG00000044981) #32	ENSRBIG00000039869 ##32	KRT36 (ENSRBIG00000013893) #34	KRT35 (ENSRBIG00000032990) #35	KRT32 (ENSRBIG00000033774) #36	KRT38 (ENSRBIG00000033491) #37	KRT37 (ENSRBIG00000030552) ##37
Platyrrhini	ANCESTRAL SPECIES	1	ENSGT00940000154971	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000160681.A ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.s.a.d ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000163444.b #37	ENSGT00940000163444.a #37	ENSGT00940000163841.d
Cebidae	ANCESTRAL SPECIES	10	ENSGT00940000154971.c	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000160681.A ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.s.a.d ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000162088	ENSGT00940000153980.j.c	ENSGT00950000183407
Cebidae_a	ANCESTRAL SPECIES	69	ENSGT00940000154971.c	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000160681.A ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.s.a.d ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000163444.b #37	ENSGT00940000163444.a #37	ENSGT00940000153980.j.c
Capuchin	MODERN SPECIES	415	RAB5C (ENSCCAG00000025940)	KAT2A (ENSCCAG00000023968) #8	DHX58 (ENSCCAG00000022542) #9	ZNF385C (ENSCCAG00000030786) #10	C17orf113 (ENSCCAG00000023601) #11	NKIRAS2 (ENSCCAG00000016990) #12	DNAJC7 (ENSCCAG00000019562) #13	CNP (ENSCCAG00000017532) #14	ODAD4 (ENSCCAG00000020868) #15	ACLY (ENSCCAG00000033582) #16	KLHL11 (ENSCCAG00000024663) #17	KLHL10 (ENSCCAG00000022400) #18	NT5C3B (ENSCCAG00000035675) #19	FKBP10 (ENSCCAG00000030890) #20	P3H4 (ENSCCAG00000036705) #21	JUP (ENSCCAG00000036633) #22	GAST (ENSCCAG00000024810) #24	EIF1 (ENSCCAG00000031875) #25	KRT17 (ENSCCAG00000031405) ##27	KRT16 (ENSCCAG00000036404) #28	KRT14 (ENSCCAG00000034073) #29	KRT9 (ENSCCAG00000029116) #30	ENSCCAG00000030249 ##31	KRT15 (ENSCCAG00000025038) #32	ENSCCAG00000020701 ##32	KRT36 (ENSCCAG00000035265) #34	KRT35 (ENSCCAG00000035353) #35	KRT32 (ENSCCAG00000021372) #36	ENSCCAG00000024865 #37	ENSCCAG00000030962 #37	KRT34 (ENSCCAG00000030284)
Bolivian squirrel monkey	MODERN SPECIES	208	KAT2A (ENSSBOG00000023343) #8	DHX58 (ENSSBOG00000020589) #9	ZNF385C (ENSSBOG00000030723) #10	C17orf113 (ENSSBOG00000026838) #11	NKIRAS2 (ENSSBOG00000031808) #12	DNAJC7 (ENSSBOG00000030306) #13	CNP (ENSSBOG00000022946) #14	ODAD4 (ENSSBOG00000020274) #15	ENSSBOG00000024371	ACLY (ENSSBOG00000025485) #16	KLHL11 (ENSSBOG00000025449) #17	KLHL10 (ENSSBOG00000003504) #18	NT5C3B (ENSSBOG00000035330) #19	FKBP10 (ENSSBOG00000035490) #20	P3H4 (ENSSBOG00000021564) #21	JUP (ENSSBOG00000005714) #22	ENSSBOG00000032307 ##25	ENSSBOG00000005823 ##27	KRT15 (ENSSBOG00000014321) #32	KRT9 (ENSSBOG00000020353) #30	ENSSBOG00000021967 ##32	KRT36 (ENSSBOG00000022014) #34	ENSSBOG00000032097	KRT32 (ENSSBOG00000031581) #36	KRTAP17-1 (ENSSBOG00000018583)	ENSSBOG00000035595	ENSSBOG00000024889	ENSSBOG00000028255	ENSSBOG00000031036	ENSSBOG00000026326	KRTAP4-5 (ENSSBOG00000024832)
Marmoset	MODERN SPECIES	17	DHX58 (ENSCJAG00000014852) #9	ENSCJAG00000079621	ZNF385C (ENSCJAG00000047842) #10	C17orf113 (ENSCJAG00000014878) #11	NKIRAS2 (ENSCJAG00000086729) #12	CNP (ENSCJAG00000014973) #14	ODAD4 (ENSCJAG00000036444) #15	ACLY (ENSCJAG00000014988) #16	KLHL11 (ENSCJAG00000015068) #17	ENSCJAG00000075103 #18	ENSCJAG00000080903	NT5C3B (ENSCJAG00000012205) #19	ENSCJAG00000066555	FKBP10 (ENSCJAG00000012179) #20	P3H4 (ENSCJAG00000012157) #21	JUP (ENSCJAG00000012139) #22	GAST (ENSCJAG00000012135) #24	ENSCJAG00000045145 #25	KRT14 (ENSCJAG00000037508) #29	KRT16 (ENSCJAG00000047935) #28	KRT9 (ENSCJAG00000048395) #30	ENSCJAG00000029756 ##31	ENSCJAG00000002399 ##32	KRT36 (ENSCJAG00000042265) #34	KRT32 (ENSCJAG00000037849) #36	ENSCJAG00000060821	KRTAP17-1 (ENSCJAG00000038264)	KRTAP16-1 (ENSCJAG00000038552)	KRTAP29-1 (ENSCJAG00000022475)	ENSCJAG00000002348	ENSCJAG00000043000
Mas night monkey	DUPLICATION
Mas night monkey	MODERN SPECIES	734	KAT2A (ENSANAG00000026916) #8	DHX58 (ENSANAG00000029056) #9	C17orf113 (ENSANAG00000030563) #11	ZNF385C (ENSANAG00000036481) #10	NKIRAS2 (ENSANAG00000028895) #12	DNAJC7 (ENSANAG00000018822) #13	CNP (ENSANAG00000033053) #14	ODAD4 (ENSANAG00000028850) #15	ENSANAG00000022815	ACLY (ENSANAG00000036009) #16	KLHL11 (ENSANAG00000025835) #17	KLHL10 (ENSANAG00000034180) #18	NT5C3B (ENSANAG00000034532) #19	FKBP10 (ENSANAG00000032568) #20	P3H4 (ENSANAG00000032174) #21	ENSANAG00000022756 #22	GAST (ENSANAG00000026679) #24	ENSANAG00000024134 #26	ENSANAG00000030349 ##25	ENSANAG00000022401 ##27	KRT16 (ENSANAG00000000025) #28	KRT14 (ENSANAG00000021827) #29	KRT9 (ENSANAG00000036881) #30	ENSANAG00000034168 ##31	KRT15 (ENSANAG00000028893) #32	KRT13 (ENSANAG00000020916) #33	KRT36 (ENSANAG00000033818) #34	KRT35 (ENSANAG00000021510) #35	KRT32 (ENSANAG00000035400) #36	ENSANAG00000020600 #37	ENSANAG00000030838 #37
Mas night monkey	MODERN SPECIES	652											POSTN (ENSANAG00000035323)	TRPC4 (ENSANAG00000025166)	ENSANAG00000026254	FREM2 (ENSANAG00000025633)	ENSANAG00000020209	ENSANAG00000020419 #22	ENSANAG00000025620	ENSANAG00000032010	SLC25A15 (ENSANAG00000019059)	MRPS31 (ENSANAG00000028614)	ENSANAG00000035106	ENSANAG00000027770	COG6 (ENSANAG00000026442)	ENSANAG00000034055	LHFPL6 (ENSANAG00000032994)	ENSANAG00000032588	NHLRC3 (ENSANAG00000028158)	PROSER1 (ENSANAG00000035185)	STOML3 (ENSANAG00000028820)
Tarsier	MODERN SPECIES	6891				ZNF385C (ENSTSYG00000010579) #10	C17orf113 (ENSTSYG00000025394) #11	NKIRAS2 (ENSTSYG00000010573) #12	DNAJC7 (ENSTSYG00000010553) #13	CNP (ENSTSYG00000035746) #14	ODAD4 (ENSTSYG00000011698) #15	ACLY (ENSTSYG00000010520) #16	KLHL11 (ENSTSYG00000012889) #17	KLHL10 (ENSTSYG00000012888) #18	NT5C3B (ENSTSYG00000034020) #19	FKBP10 (ENSTSYG00000032317) #20	P3H4 (ENSTSYG00000026257) #21	JUP (ENSTSYG00000033406) #22	ENSTSYG00000012044	HAP1 (ENSTSYG00000031579) #23	GAST (ENSTSYG00000032402) #24	EIF1 (ENSTSYG00000031918) #25	KRT17 (ENSTSYG00000014310) ##27	KRT16 (ENSTSYG00000027010) #28	KRT14 (ENSTSYG00000033735) #29	ENSTSYG00000031839 #30	KRT19 (ENSTSYG00000005685) ##31	KRT15 (ENSTSYG00000013851) #32	KRT13 (ENSTSYG00000036392) #33	KRT36 (ENSTSYG00000013056) #34	KRT35 (ENSTSYG00000014317) #35	KRT32 (ENSTSYG00000014314) #36	ENSTSYG00000005419 #37
Strepsirrhini	ANCESTRAL SPECIES	4	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00950000182812.A	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00950000183311 #33	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000163444 #37	ENSGT00940000162088
Lemuriformes	ANCESTRAL SPECIES	2	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00950000183311 #33	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000163444 #37	ENSGT00940000162088
Mouse lemur	MODERN SPECIES	7	HSPB9 (ENSMICG00000042824) #7	KAT2A (ENSMICG00000011944) #8	DHX58 (ENSMICG00000011933) #9	C17orf113 (ENSMICG00000042519) #11	ZNF385C (ENSMICG00000015236) #10	NKIRAS2 (ENSMICG00000044707) #12	DNAJC7 (ENSMICG00000011908) #13	CNP (ENSMICG00000011903) #14	ODAD4 (ENSMICG00000011891) #15	ACLY (ENSMICG00000011865) #16	KLHL11 (ENSMICG00000047724) #17	KLHL10 (ENSMICG00000011862) #18	NT5C3B (ENSMICG00000011851) #19	FKBP10 (ENSMICG00000011846) #20	P3H4 (ENSMICG00000011838) #21	JUP (ENSMICG00000011829) #22	HAP1 (ENSMICG00000026602) #23	GAST (ENSMICG00000011819) #24	EIF1 (ENSMICG00000011816) #25	KRT17 (ENSMICG00000011795) ##27	KRT16 (ENSMICG00000011787) #28	KRT14 (ENSMICG00000011774) #29	KRT9 (ENSMICG00000012911) #30	KRT19 (ENSMICG00000033033) ##31	KRT15 (ENSMICG00000012890) #32	KRT13 (ENSMICG00000012884) #33	KRT36 (ENSMICG00000012877) #34	KRT35 (ENSMICG00000012869) #35	KRT32 (ENSMICG00000012857) #36	ENSMICG00000012831 #37	ENSMICG00000012845
Lemuriformes_a	ANCESTRAL SPECIES		ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00950000183311 #33	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000163444 #37	ENSGT00940000162088
Coquerels sifaka	MODERN SPECIES	672	ENSPCOG00000026327	KAT2A (ENSPCOG00000019992) #8	DHX58 (ENSPCOG00000021497) #9	ZNF385C (ENSPCOG00000023229) #10	C17orf113 (ENSPCOG00000011062) #11	NKIRAS2 (ENSPCOG00000016888) #12	DNAJC7 (ENSPCOG00000021375) #13	CNP (ENSPCOG00000022353) #14	ODAD4 (ENSPCOG00000023085) #15	ACLY (ENSPCOG00000024929) #16	KLHL11 (ENSPCOG00000026869) #17	KLHL10 (ENSPCOG00000024335) #18	NT5C3B (ENSPCOG00000025707) #19	FKBP10 (ENSPCOG00000018272) #20	P3H4 (ENSPCOG00000023660) #21	JUP (ENSPCOG00000017771) #22
Greater bamboo lemur	MODERN SPECIES	92	ENSPSMG00000012593 #7	KAT2A (ENSPSMG00000012613) #8	DHX58 (ENSPSMG00000012642) #9	ZNF385C (ENSPSMG00000012679) #10	C17orf113 (ENSPSMG00000012692) #11	NKIRAS2 (ENSPSMG00000012696) #12	DNAJC7 (ENSPSMG00000012751) #13	CNP (ENSPSMG00000012828) #14	ODAD4 (ENSPSMG00000012856) #15	ACLY (ENSPSMG00000013164) #16	KLHL11 (ENSPSMG00000013768) #17	KLHL10 (ENSPSMG00000013796) #18	NT5C3B (ENSPSMG00000013841) #19	FKBP10 (ENSPSMG00000013875) #20	P3H4 (ENSPSMG00000013894) #21	JUP (ENSPSMG00000013930) #22	HAP1 (ENSPSMG00000013966) #23	GAST (ENSPSMG00000014008) #24	EIF1 (ENSPSMG00000014023) ##25	KRT17 (ENSPSMG00000014105) ##27	KRT16 (ENSPSMG00000014155) #28	KRT14 (ENSPSMG00000014171) #29	KRT9 (ENSPSMG00000014177) #30	KRT19 (ENSPSMG00000014194) ##31	KRT15 (ENSPSMG00000014210) #32	KRT13 (ENSPSMG00000014239) #33	KRT36 (ENSPSMG00000014251) #34	KRT35 (ENSPSMG00000014276) #35	KRT32 (ENSPSMG00000014291) #36	ENSPSMG00000014300 #37	ENSPSMG00000014316
Bushbaby	MODERN SPECIES	133	HSPB9 (ENSOGAG00000009452) #7	KAT2A (ENSOGAG00000009442) #8	DHX58 (ENSOGAG00000025321) #9	ZNF385C (ENSOGAG00000017196) #10	ENSOGAG00000024165	NKIRAS2 (ENSOGAG00000017195) #12	DNAJC7 (ENSOGAG00000017194) #13	CNP (ENSOGAG00000024241) #14	ODAD4 (ENSOGAG00000004644) #15	ACLY (ENSOGAG00000004641) #16	ENSOGAG00000034361 #17	KLHL10 (ENSOGAG00000000451) #18	NT5C3B (ENSOGAG00000027167) #19	FKBP10 (ENSOGAG00000009532) #20	P3H4 (ENSOGAG00000009525) #21	JUP (ENSOGAG00000009523) #22	HAP1 (ENSOGAG00000009517) #23	GAST (ENSOGAG00000009512) #24	EIF1 (ENSOGAG00000031577) #25	KRT17 (ENSOGAG00000032869) ##27	KRT16 (ENSOGAG00000025817) #28	KRT14 (ENSOGAG00000011471) #29	KRT9 (ENSOGAG00000011469) #30	KRT19 (ENSOGAG00000024306) ##31	KRT15 (ENSOGAG00000011466) #32	ENSOGAG00000011464 ##32	KRT36 (ENSOGAG00000011461) #34	KRT35 (ENSOGAG00000031733) #35	KRT32 (ENSOGAG00000011449) #36	ENSOGAG00000011453	ENSOGAG00000011459
Euarchontoglires_A	ANCESTRAL SPECIES	4	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00390000015789.c.b ##25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36
Tree shrew	MODERN SPECIES	3947																JUP (ENSTBEG00000007076) #22	ENSTBEG00000006946 #23	ENSTBEG00000006930 ##25
Glires	ANCESTRAL SPECIES	3	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00390000015789.c.b.t ##25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00950000183311 #33	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35
Lagomorpha	ANCESTRAL SPECIES		ENSGT00390000016401	ENSGT00390000014272	ENSGT00940000156363	ENSGT00940000154971	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.d.b.b ##25	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000163444 #37	ENSGT00940000162088	ENSGT00940000153980.j.a.b.a.b
Rabbit	MODERN SPECIES	10	HCRT (ENSOCUG00000013324)	KCNH4 (ENSOCUG00000013312)	RAB5C (ENSOCUG00000013307)	HSPB9 (ENSOCUG00000013299) #7	KAT2A (ENSOCUG00000013285) #8	DHX58 (ENSOCUG00000013278) #9	ZNF385C (ENSOCUG00000013271) #10	NKIRAS2 (ENSOCUG00000013267) #12	DNAJC7 (ENSOCUG00000013255) #13	ODAD4 (ENSOCUG00000013236) #15	ACLY (ENSOCUG00000013212) #16	KLHL10 (ENSOCUG00000024581) #18	FKBP10 (ENSOCUG00000000611) #20	KLHL11 (ENSOCUG00000000614) #17	P3H4 (ENSOCUG00000007629) #21	JUP (ENSOCUG00000012063) #22	GAST (ENSOCUG00000024965) #24	ENSOCUG00000000604 ##25	KRT17 (ENSOCUG00000029569) ##27	KRT16 (ENSOCUG00000011781) #28	KRT35 (ENSOCUG00000013084) #35	KRT15 (ENSOCUG00000013123) #32	KRT32 (ENSOCUG00000013079) #36	ENSOCUG00000014208 #37	ENSOCUG00000009206	ENSOCUG00000011173	KRT34 (ENSOCUG00000014195)	ENSOCUG00000013096	KRT33A (ENSOCUG00000014192)	KRTAP17-1 (ENSOCUG00000025222)	ENSOCUG00000024522
Pika	MODERN SPECIES	3821									ZNF385C (ENSOPRG00000008120) #10	NKIRAS2 (ENSOPRG00000008113) #12	DNAJC7 (ENSOPRG00000008093) #13	ODAD4 (ENSOPRG00000008065) #15	ACLY (ENSOPRG00000008041) #16	ENSOPRG00000008022 #17	KLHL10 (ENSOPRG00000008014) #18	JUP (ENSOPRG00000007992) #22	ENSOPRG00000007970 #23	GAST (ENSOPRG00000007965) #24	KRT17 (ENSOPRG00000007946) ##27	KRT16 (ENSOPRG00000007938) #28	KRT14 (ENSOPRG00000007922) #29	KRT19 (ENSOPRG00000007908) ##31	KRT15 (ENSOPRG00000007893) #32	ENSOPRG00000007873 ##32	KRT36 (ENSOPRG00000007861) #34	KRT35 (ENSOPRG00000007848) #35	KRT32 (ENSOPRG00000007824) #36	ENSOPRG00000007809	ENSOPRG00000007790	KRT34 (ENSOPRG00000007768)	ENSOPRG00000007755
Rodentia	ANCESTRAL SPECIES	4	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00390000015789.c.b.t ##25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36
Rodentia_B	ANCESTRAL SPECIES	1	ENSGT00940000154971	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.b.t ##25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000153980.j.a.b.a.b
Myomorpha	ANCESTRAL SPECIES		ENSGT00940000154971	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.b.t ##25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000153980.j.a.b.a.b
Muroidea	ANCESTRAL SPECIES		ENSGT00940000154971	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.b.t.c.a ##25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000153980.j.a.b.a.b
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00940000154971	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.b.t.c.b.a ##25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000153980.j.a.b.a.b
Cricetidae	ANCESTRAL SPECIES		ENSGT00940000154971	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.b.t.c.b.a ##25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000153980.j.a.b.a.b
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00940000154971	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.b.t.c.b.a ##25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000153980.j.a.b.a.b
Northern American deer mouse	MODERN SPECIES	21	Rab5c (ENSPEMG00000017971)	Hspb9 (ENSPEMG00000017059) #7	Kat2a (ENSPEMG00000017221) #8	Dhx58 (ENSPEMG00000018681) #9	Zfp385c (ENSPEMG00000018609) #10	Nkiras2 (ENSPEMG00000030424) #12	Dnajc7 (ENSPEMG00000009887) #13	Cnp (ENSPEMG00000011807) #14	Odad4 (ENSPEMG00000004971) #15	Acly (ENSPEMG00000006656) #16	Klhl11 (ENSPEMG00000026157) #17	Klhl10 (ENSPEMG00000016939) #18	Nt5c3b (ENSPEMG00000016608) #19	Fkbp10 (ENSPEMG00000015119) #20	P3h4 (ENSPEMG00000003895) #21	Jup (ENSPEMG00000011596) #22	Hap1 (ENSPEMG00000012716) #23	Gast (ENSPEMG00000011428) #24	ENSPEMG00000015694 ##25	Krt42 (ENSPEMG00000012473)	Krt17 (ENSPEMG00000018467) ##27	Krt16 (ENSPEMG00000010768) #28	Krt14 (ENSPEMG00000018789) #29	Krt9 (ENSPEMG00000008176) #30	Krt19 (ENSPEMG00000006832) ##31	Krt15 (ENSPEMG00000017616) #32	Krt13 (ENSPEMG00000018368) ##32	Krt36 (ENSPEMG00000013117) #34	Krt35 (ENSPEMG00000002875) #35	Krt32 (ENSPEMG00000018356) #36	Krt31 (ENSPEMG00000006083)
Prairie vole	MODERN SPECIES	114													Nt5c3b (ENSMOCG00000012904) #19	Fkbp10 (ENSMOCG00000020969) #20	P3h4 (ENSMOCG00000020222) #21	Jup (ENSMOCG00000013988) #22	Hap1 (ENSMOCG00000018599) #23	Gast (ENSMOCG00000015714) #24	Eif1 (ENSMOCG00000013986) ##25	Krt42 (ENSMOCG00000020707)	Krt17 (ENSMOCG00000007079) ##27	Krt16 (ENSMOCG00000002310) #28	Krt14 (ENSMOCG00000012751) #29	Krt9 (ENSMOCG00000007293) #30	Krt19 (ENSMOCG00000015107) ##31	Krt15 (ENSMOCG00000014586) #32	Krt13 (ENSMOCG00000010928) ##32	ENSMOCG00000006876	Krt36 (ENSMOCG00000018894) #34	Krt35 (ENSMOCG00000011239) #35	Krt32 (ENSMOCG00000000760) #36
Cricetinae	ANCESTRAL SPECIES		ENSGT00940000154971	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.b.t.c.b.a ##25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000153980.j.a.b.a.b
Chinese hamster chok1gshd	MODERN SPECIES	33	Rab5c (ENSCGRG00001014226)	Hspb9 (ENSCGRG00001012537) #7	Kat2a (ENSCGRG00001018026) #8	Dhx58 (ENSCGRG00001010336) #9	Zfp385c (ENSCGRG00001021185) #10	Nkiras2 (ENSCGRG00001021109) #12	Dnajc7 (ENSCGRG00001022002) #13	Cnp (ENSCGRG00001019037) #14	Odad4 (ENSCGRG00001022193) #15	ENSCGRG00001020299 #16	Klhl11 (ENSCGRG00001000275) #17	Klhl10 (ENSCGRG00001017363) #18	Nt5c3b (ENSCGRG00001023229) #19	Fkbp10 (ENSCGRG00001015001) #20	P3h4 (ENSCGRG00001005342) #21	Jup (ENSCGRG00001005618) #22	Hap1 (ENSCGRG00001016906) #23	Gast (ENSCGRG00001018132) #24	ENSCGRG00001015513 ##25	Krt42 (ENSCGRG00001005409)	Krt17 (ENSCGRG00001020336) ##27	Krt16 (ENSCGRG00001015254) #28	Krt14 (ENSCGRG00001015161) #29	Krt9 (ENSCGRG00001021018) #30	Krt19 (ENSCGRG00001015028) ##31	Krt15 (ENSCGRG00001012486) #32	Krt13 (ENSCGRG00001006585) ##32	Krt36 (ENSCGRG00001022979) #34	Krt35 (ENSCGRG00001022383) #35	Krt32 (ENSCGRG00001019573) #36	Krt31 (ENSCGRG00001020331)
Golden Hamster	MODERN SPECIES	882	Kcnh4 (ENSMAUG00000021037)	Rab5c (ENSMAUG00000015005)	Kat2a (ENSMAUG00000019208) #8	Dhx58 (ENSMAUG00000019934) #9	Zfp385c (ENSMAUG00000020342) #10	Nkiras2 (ENSMAUG00000015264) #12	Dnajc7 (ENSMAUG00000021058) #13	Cnp (ENSMAUG00000013752) #14	Odad4 (ENSMAUG00000006166) #15	Acly (ENSMAUG00000000465) #16	Klhl11 (ENSMAUG00000017249) #17	Klhl10 (ENSMAUG00000021131) #18	Nt5c3b (ENSMAUG00000015023) #19	Fkbp10 (ENSMAUG00000014011) #20	P3h4 (ENSMAUG00000017873) #21	Jup (ENSMAUG00000015872) #22	Hap1 (ENSMAUG00000015239) #23	Gast (ENSMAUG00000016246) #24	ENSMAUG00000008970	Krt17 (ENSMAUG00000015460) ##27	Krt16 (ENSMAUG00000013514) #28	Krt14 (ENSMAUG00000014542) #29	Krt9 (ENSMAUG00000009863) #30	Krt19 (ENSMAUG00000001379) ##31	Krt15 (ENSMAUG00000012596) #32	Krt13 (ENSMAUG00000016027) ##32	Krt36 (ENSMAUG00000014666) #34	Krt35 (ENSMAUG00000013766) #35	Krt32 (ENSMAUG00000011384) #36	Krt34 (ENSMAUG00000012068)	ENSMAUG00000010414
Murinae	ANCESTRAL SPECIES	6	ENSGT00940000154971	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.b.t.c.b.a ##25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000153980.j.a.b.a.b
Mus	ANCESTRAL SPECIES	2	ENSGT00940000154971	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.b.t.c.b.a ##25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000153980.j.a.b.a.b
Mus_A	ANCESTRAL SPECIES	2	ENSGT00940000154971	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.b.t.c.b.a ##25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000153980.j.a.b.a.b
Mus_B	ANCESTRAL SPECIES	2	ENSGT00940000154971	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.b.t.c.b.a ##25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000153980.j.a.b.a.b
Mouse	MODERN SPECIES	2	Rab5c (ENSMUSG00000019173)	Hspb9 (ENSMUSG00000017832) #7	Kat2a (ENSMUSG00000020918) #8	Dhx58 (ENSMUSG00000017830) #9	Zfp385c (ENSMUSG00000014198) #10	Nkiras2 (ENSMUSG00000017837) #12	Dnajc7 (ENSMUSG00000014195) #13	Cnp (ENSMUSG00000006782) #14	Odad4 (ENSMUSG00000006784) #15	Acly (ENSMUSG00000020917) #16	Klhl11 (ENSMUSG00000048732) #17	Klhl10 (ENSMUSG00000001558) #18	Nt5c3b (ENSMUSG00000017176) #19	Fkbp10 (ENSMUSG00000001555) #20	P3h4 (ENSMUSG00000006931) #21	Jup (ENSMUSG00000001552) #22	Hap1 (ENSMUSG00000006930) #23	Gast (ENSMUSG00000017165) #24	Eif1 (ENSMUSG00000035530) ##25	Krt42 (ENSMUSG00000053654)	Krt17 (ENSMUSG00000035557) ##27	Krt16 (ENSMUSG00000053797) #28	Krt14 (ENSMUSG00000045545) #29	Krt9 (ENSMUSG00000051617) #30	Krt19 (ENSMUSG00000020911) ##31	Krt15 (ENSMUSG00000054146) #32	Krt13 (ENSMUSG00000044041) ##32	Krt36 (ENSMUSG00000020916) #34	Krt35 (ENSMUSG00000048013) #35	Krt32 (ENSMUSG00000046095) #36	Krt31 (ENSMUSG00000048981)
Mus_C	ANCESTRAL SPECIES	21	ENSGT00940000154971	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.b.t.c.b.a ##25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b.c #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000153980.j.a.b.a.b
Steppe mouse	MODERN SPECIES	2508						ENSMSIG00000000293 #13	ENSMSIG00000000383	Cnp (ENSMSIG00000000414) #14	Odad4 (ENSMSIG00000000453) #15	Acly (ENSMSIG00000000565) #16	Klhl11 (ENSMSIG00000000730) #17	Klhl10 (ENSMSIG00000000753) #18	Nt5c3b (ENSMSIG00000000807) #19	Fkbp10 (ENSMSIG00000000865) #20	P3h4 (ENSMSIG00000000942) #21	Jup (ENSMSIG00000001000) #22	Hap1 (ENSMSIG00000001037) #23	Gast (ENSMSIG00000001061) #24	ENSMSIG00000001075 ##25	Krt42 (ENSMSIG00000001103)	Krt17 (ENSMSIG00000001129) ##27	ENSMSIG00000001147 #28	ENSMSIG00000001184 #28	Krt14 (ENSMSIG00000001257) #29	ENSMSIG00000001354 #30	Krt15 (ENSMSIG00000001420) #32	Krt13 (ENSMSIG00000001442) ##32	Krt36 (ENSMSIG00000001468) #34	Krt35 (ENSMSIG00000001493) #35	Krt32 (ENSMSIG00000001532) #36
spretus	MODERN SPECIES	2	Rab5c (MGP_SPRETEiJ_G0018027)	Hspb9 (MGP_SPRETEiJ_G0018026) #7	Kat2a (MGP_SPRETEiJ_G0018025) #8	Dhx58 (MGP_SPRETEiJ_G0018024) #9	Zfp385c (MGP_SPRETEiJ_G0018023) #10	Nkiras2 (MGP_SPRETEiJ_G0018022) #12	Dnajc7 (MGP_SPRETEiJ_G0018021) #13	Cnp (MGP_SPRETEiJ_G0018020) #14	Odad4 (MGP_SPRETEiJ_G0018019) #15	Acly (MGP_SPRETEiJ_G0018018) #16	Klhl11 (MGP_SPRETEiJ_G0018017) #17	Klhl10 (MGP_SPRETEiJ_G0018016) #18	Nt5c3b (MGP_SPRETEiJ_G0018015) #19	Fkbp10 (MGP_SPRETEiJ_G0018014) #20	P3h4 (MGP_SPRETEiJ_G0018013) #21	Jup (MGP_SPRETEiJ_G0018012) #22	Hap1 (MGP_SPRETEiJ_G0018011) #23	Gast (MGP_SPRETEiJ_G0018010) #24	MGP_SPRETEiJ_G0018009 ##25	Krt42 (MGP_SPRETEiJ_G0018008)	Krt17 (MGP_SPRETEiJ_G0018007) ##27	MGP_SPRETEiJ_G0018006 #28	Krt14 (MGP_SPRETEiJ_G0018005) #29	Krt9 (MGP_SPRETEiJ_G0018004) #30	Krt19 (MGP_SPRETEiJ_G0018003) ##31	Krt15 (MGP_SPRETEiJ_G0018002) #32	Krt13 (MGP_SPRETEiJ_G0018001) ##32	Krt36 (MGP_SPRETEiJ_G0018000) #34	Krt35 (MGP_SPRETEiJ_G0017999) #35	Krt32 (MGP_SPRETEiJ_G0017998) #36	Krt31 (MGP_SPRETEiJ_G0017997)
Ryukyu mouse	MODERN SPECIES	2	Rab5c (MGP_CAROLIEiJ_G0017184)	Hspb9 (MGP_CAROLIEiJ_G0017183) #7	Kat2a (MGP_CAROLIEiJ_G0017182) #8	Dhx58 (MGP_CAROLIEiJ_G0017181) #9	Zfp385c (MGP_CAROLIEiJ_G0017180) #10	Nkiras2 (MGP_CAROLIEiJ_G0017179) #12	Dnajc7 (MGP_CAROLIEiJ_G0017178) #13	Cnp (MGP_CAROLIEiJ_G0017177) #14	Odad4 (MGP_CAROLIEiJ_G0017176) #15	Acly (MGP_CAROLIEiJ_G0017175) #16	Klhl11 (MGP_CAROLIEiJ_G0017174) #17	Klhl10 (MGP_CAROLIEiJ_G0017173) #18	Nt5c3b (MGP_CAROLIEiJ_G0017172) #19	Fkbp10 (MGP_CAROLIEiJ_G0017171) #20	P3h4 (MGP_CAROLIEiJ_G0017170) #21	Jup (MGP_CAROLIEiJ_G0017169) #22	Hap1 (MGP_CAROLIEiJ_G0017168) #23	Gast (MGP_CAROLIEiJ_G0017167) #24	Krt42 (MGP_CAROLIEiJ_G0017166)	Krt17 (MGP_CAROLIEiJ_G0017165) ##27	MGP_CAROLIEiJ_G0017164 #28	Krt14 (MGP_CAROLIEiJ_G0017163) #29	Krt9 (MGP_CAROLIEiJ_G0017162) #30	Krt19 (MGP_CAROLIEiJ_G0017161) ##31	Krt15 (MGP_CAROLIEiJ_G0017160) #32	Krt13 (MGP_CAROLIEiJ_G0017159) ##32	Krt36 (MGP_CAROLIEiJ_G0017158) #34	Krt35 (MGP_CAROLIEiJ_G0017157) #35	Krt32 (MGP_CAROLIEiJ_G0017156) #36	Krt31 (MGP_CAROLIEiJ_G0017155)	Krt34 (MGP_CAROLIEiJ_G0017154)
Shrew mouse	MODERN SPECIES	5	Rab5c (MGP_PahariEiJ_G0018314)	Hspb9 (MGP_PahariEiJ_G0018313) #7	Kat2a (MGP_PahariEiJ_G0018312) #8	Dhx58 (MGP_PahariEiJ_G0018311) #9	Zfp385c (MGP_PahariEiJ_G0018310) #10	Nkiras2 (MGP_PahariEiJ_G0018309) #12	Dnajc7 (MGP_PahariEiJ_G0018308) #13	Cnp (MGP_PahariEiJ_G0018307) #14	MGP_PahariEiJ_G0018306 #15	Acly (MGP_PahariEiJ_G0018305) #16	Klhl11 (MGP_PahariEiJ_G0018304) #17	Klhl10 (MGP_PahariEiJ_G0018303) #18	Nt5c3b (MGP_PahariEiJ_G0018302) #19	Fkbp10 (MGP_PahariEiJ_G0018301) #20	P3h4 (MGP_PahariEiJ_G0018300) #21	Jup (MGP_PahariEiJ_G0018299) #22	Hap1 (MGP_PahariEiJ_G0018298) #23	Gast (MGP_PahariEiJ_G0018297) #24	MGP_PahariEiJ_G0018296 ##25	Krt42 (MGP_PahariEiJ_G0018295)	Krt17 (MGP_PahariEiJ_G0018294) ##27	MGP_PahariEiJ_G0018293 #28	Krt14 (MGP_PahariEiJ_G0018292) #29	MGP_PahariEiJ_G0018291 #30	Krt19 (MGP_PahariEiJ_G0018290) ##31	Krt15 (MGP_PahariEiJ_G0018289) #32	Krt13 (MGP_PahariEiJ_G0018288) ##32	Krt36 (MGP_PahariEiJ_G0018287) #34	Krt35 (MGP_PahariEiJ_G0018286) #35	Krt32 (MGP_PahariEiJ_G0018285) #36	Krt31 (MGP_PahariEiJ_G0018284)
Rat	MODERN SPECIES	1	Rab5c (ENSRNOG00000018568)	Hspb9 (ENSRNOG00000036819) #7	Kat2a (ENSRNOG00000018364) #8	Dhx58 (ENSRNOG00000018247) #9	Zfp385c (ENSRNOG00000025370) #10	Nkiras2 (ENSRNOG00000018095) #12	Dnajc7 (ENSRNOG00000017781) #13	Cnp (ENSRNOG00000017496) #14	Odad4 (ENSRNOG00000017473) #15	Acly (ENSRNOG00000016924) #16	Klhl11 (ENSRNOG00000016921) #17	Klhl10 (ENSRNOG00000016749) #18	Nt5c3b (ENSRNOG00000016475) #19	Fkbp10 (ENSRNOG00000015941) #20	P3h4 (ENSRNOG00000015787) #21	Jup (ENSRNOG00000015380) #22	Hap1 (ENSRNOG00000014819) #23	Gast (ENSRNOG00000014740) #24	Eif1 (ENSRNOG00000033765) ##25	Krt42 (ENSRNOG00000034087)	Krt17 (ENSRNOG00000026371) ##27	Krt9 (ENSRNOG00000014370) #30	Krt16 (ENSRNOG00000003899) #28	Krt13 (ENSRNOG00000014070) ##32	Krt36 (ENSRNOG00000031805) #34	Krt35 (ENSRNOG00000013754) #35	Krt32 (ENSRNOG00000013611) #36	Krt31 (ENSRNOG00000030344)	Krt34 (ENSRNOG00000051302)	Krt33b (ENSRNOG00000068212)	Krt33a (ENSRNOG00000062912)
Upper Galilee mountains blind mole rat	MODERN SPECIES	912	ENSNGAG00000010286	Kat2a (ENSNGAG00000011766) #8	Dhx58 (ENSNGAG00000017107) #9	Zfp385c (ENSNGAG00000009495) #10	Nkiras2 (ENSNGAG00000018489) #12	Dnajc7 (ENSNGAG00000014379) #13	Cnp (ENSNGAG00000006656) #14	Odad4 (ENSNGAG00000020605) #15	ENSNGAG00000018695	Acly (ENSNGAG00000009022) #16	Klhl11 (ENSNGAG00000020048) #17	Klhl10 (ENSNGAG00000011124) #18	Nt5c3b (ENSNGAG00000000422) #19	Fkbp10 (ENSNGAG00000017675) #20	P3h4 (ENSNGAG00000000360) #21	Jup (ENSNGAG00000000170) #22	ENSNGAG00000019533	Hap1 (ENSNGAG00000007898) #23	Gast (ENSNGAG00000019585) #24	Eif1 (ENSNGAG00000018937) ##25	Krt42 (ENSNGAG00000019553)	Krt17 (ENSNGAG00000012777) ##27	Krt16 (ENSNGAG00000000117) #28	Krt14 (ENSNGAG00000010672) #29	ENSNGAG00000018654 #30	Krt19 (ENSNGAG00000011315) ##31	Krt15 (ENSNGAG00000001364) #32	Krt13 (ENSNGAG00000015515) ##32	Krt36 (ENSNGAG00000020685) #34	Krt35 (ENSNGAG00000019802) #35	Krt32 (ENSNGAG00000013427) #36
Lesser Egyptian jerboa	MODERN SPECIES	56	Kcnh4 (ENSJJAG00000021495)	Rab5c (ENSJJAG00000021181)	Kat2a (ENSJJAG00000021399) #8	Dhx58 (ENSJJAG00000000855) #9	Zfp385c (ENSJJAG00000020892) #10	Nkiras2 (ENSJJAG00000009448) #12	Dnajc7 (ENSJJAG00000009724) #13	Cnp (ENSJJAG00000021905) #14	Odad4 (ENSJJAG00000021988) #15	Acly (ENSJJAG00000023463) #16	Klhl11 (ENSJJAG00000021286) #17	Klhl10 (ENSJJAG00000023238) #18	Nt5c3b (ENSJJAG00000022142) #19	Fkbp10 (ENSJJAG00000021205) #20	P3h4 (ENSJJAG00000022678) #21	Jup (ENSJJAG00000021441) #22	Hap1 (ENSJJAG00000022760) #23	Gast (ENSJJAG00000021370) #24	Eif1 (ENSJJAG00000021198) ##25	Krt42 (ENSJJAG00000022125)	Krt17 (ENSJJAG00000009622) ##27	Krt16 (ENSJJAG00000022085) #28	Krt14 (ENSJJAG00000023341) #29	ENSJJAG00000022627 #30	Krt19 (ENSJJAG00000023491) ##31	Krt15 (ENSJJAG00000023216) #32	Krt13 (ENSJJAG00000002259) ##32	Krt36 (ENSJJAG00000021463) #34	Krt35 (ENSJJAG00000022241) #35	Krt32 (ENSJJAG00000021346) #36	ENSJJAG00000021849
Kangaroo rat	MODERN SPECIES	326	Kcnh4 (ENSDORG00000002370)	Rab5c (ENSDORG00000006819)	Kat2a (ENSDORG00000006817) #8	Dhx58 (ENSDORG00000006815) #9	Zfp385c (ENSDORG00000001917) #10	Nkiras2 (ENSDORG00000024004) #12	Dnajc7 (ENSDORG00000001914) #13	Cnp (ENSDORG00000001913) #14	Odad4 (ENSDORG00000001910) #15	Acly (ENSDORG00000001906) #16	Klhl11 (ENSDORG00000001903) #17	Klhl10 (ENSDORG00000001899) #18	Nt5c3b (ENSDORG00000003263) #19	Fkbp10 (ENSDORG00000001100) #20	P3h4 (ENSDORG00000001103) #21	Jup (ENSDORG00000001104) #22	Hap1 (ENSDORG00000005913) #23	Gast (ENSDORG00000005917) #24	ENSDORG00000013853 ##25	Krt42 (ENSDORG00000029252)	Krt17 (ENSDORG00000016115) ##27	Krt16 (ENSDORG00000016113) #28	Krt14 (ENSDORG00000029977) #29	Krt9 (ENSDORG00000026645) #30	Krt19 (ENSDORG00000006970) ##31	Krt15 (ENSDORG00000006968) #32	Krt13 (ENSDORG00000006965) ##32	Krt36 (ENSDORG00000006963) #34	Krt35 (ENSDORG00000028712) #35	Krt32 (ENSDORG00000006959) #36	Krt31 (ENSDORG00000025918)
Rodentia_A	ANCESTRAL SPECIES	3	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000163841
Hystricomorpha	ANCESTRAL SPECIES	3	ENSGT00940000154971	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000163426	ENSGT00940000153980.j.a.a
Hystricomorpha_a	ANCESTRAL SPECIES		ENSGT00940000154971	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000153980.j.a.a	ENSGT00940000163658
Hystricomorpha_b	ANCESTRAL SPECIES		ENSGT00940000154971	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000153980.j.a.a	ENSGT00940000163658
Long-tailed chinchilla	MODERN SPECIES	158	KCNH4 (ENSCLAG00000016815)	RAB5C (ENSCLAG00000016650)	KAT2A (ENSCLAG00000015084) #8	DHX58 (ENSCLAG00000013960) #9	ZNF385C (ENSCLAG00000015100) #10	NKIRAS2 (ENSCLAG00000014896) #12	DNAJC7 (ENSCLAG00000015312) #13	CNP (ENSCLAG00000015883) #14	ODAD4 (ENSCLAG00000014476) #15	ACLY (ENSCLAG00000014600) #16	KLHL11 (ENSCLAG00000017003) #17	KLHL10 (ENSCLAG00000017306) #18	NT5C3B (ENSCLAG00000015634) #19	FKBP10 (ENSCLAG00000016960) #20	P3H4 (ENSCLAG00000015645) #21	JUP (ENSCLAG00000015947) #22	GAST (ENSCLAG00000016052) #24	ENSCLAG00000015732 ##25	ENSCLAG00000015351	KRT16 (ENSCLAG00000016344) #28	KRT9 (ENSCLAG00000016583) #30	KRT19 (ENSCLAG00000015425) ##31	KRT15 (ENSCLAG00000013658) #32	ENSCLAG00000015341 ##32	ENSCLAG00000016636	ENSCLAG00000017990	KRTAP16-1 (ENSCLAG00000016554)	ENSCLAG00000015082	ENSCLAG00000017906	ENSCLAG00000015077	ENSCLAG00000015152
Degu	MODERN SPECIES	97	RAB5C (ENSODEG00000017920)	HSPB9 (ENSODEG00000018407) #7	KAT2A (ENSODEG00000018011) #8	DHX58 (ENSODEG00000017902) #9	ZNF385C (ENSODEG00000018049) #10	NKIRAS2 (ENSODEG00000017843) #12	DNAJC7 (ENSODEG00000017953) #13	CNP (ENSODEG00000017962) #14	ODAD4 (ENSODEG00000017939) #15	ACLY (ENSODEG00000018143) #16	KLHL11 (ENSODEG00000017875) #17	KLHL10 (ENSODEG00000018015) #18	NT5C3B (ENSODEG00000018081) #19	FKBP10 (ENSODEG00000017908) #20	P3H4 (ENSODEG00000017979) #21	JUP (ENSODEG00000017964) #22	GAST (ENSODEG00000017853) #24	EIF1 (ENSODEG00000018101) #25	ENSODEG00000017881	KRT17 (ENSODEG00000017862) ##27	KRT16 (ENSODEG00000017857) #28	KRT14 (ENSODEG00000017873) #29	KRT9 (ENSODEG00000017935) #30	KRT19 (ENSODEG00000017884) ##31	KRT15 (ENSODEG00000017969) #32	ENSODEG00000017822 ##32	KRT36 (ENSODEG00000017942) #34	KRT35 (ENSODEG00000017892) #35	KRT32 (ENSODEG00000017895) #36	ENSODEG00000017837	ENSODEG00000017841
Guinea pig	MODERN SPECIES	53	RAB5C (ENSCPOG00000011190)	HSPB9 (ENSCPOG00000026480) #7	KAT2A (ENSCPOG00000040409) #8	DHX58 (ENSCPOG00000023721) #9	ZNF385C (ENSCPOG00000006417) #10	NKIRAS2 (ENSCPOG00000037805) #12	DNAJC7 (ENSCPOG00000023384) #13	CNP (ENSCPOG00000020940) #14	ODAD4 (ENSCPOG00000023846) #15	ACLY (ENSCPOG00000010813) #16	KLHL11 (ENSCPOG00000021621) #17	KLHL10 (ENSCPOG00000002818) #18	NT5C3B (ENSCPOG00000027400) #19	FKBP10 (ENSCPOG00000020998) #20	P3H4 (ENSCPOG00000026262) #21	JUP (ENSCPOG00000003295) #22	GAST (ENSCPOG00000009853) #24	ENSCPOG00000030441 ##25	KRT9 (ENSCPOG00000033124) #30	KRT19 (ENSCPOG00000035147) ##31	KRT14 (ENSCPOG00000006839) #29	ENSCPOG00000034373 ##32	KRT36 (ENSCPOG00000032028) #34	KRT35 (ENSCPOG00000030708) #35	ENSCPOG00000038800	ENSCPOG00000032896	ENSCPOG00000032218	ENSCPOG00000039793	ENSCPOG00000025665	KRTAP16-1 (ENSCPOG00000020936)	ENSCPOG00000032008
Naked mole-rat female	MODERN SPECIES	12	ENSHGLG00000032125 #7	KAT2A (ENSHGLG00000014215) #8	DHX58 (ENSHGLG00000011529) #9	ZNF385C (ENSHGLG00000013481) #10	ENSHGLG00000034407	ENSHGLG00000039749 #12	DNAJC7 (ENSHGLG00000016992) #13	CNP (ENSHGLG00000016638) #14	ODAD4 (ENSHGLG00000016605) #15	ACLY (ENSHGLG00000014233) #16	KLHL11 (ENSHGLG00000037770) #17	KLHL10 (ENSHGLG00000018732) #18	NT5C3B (ENSHGLG00000015568) #19	FKBP10 (ENSHGLG00000016119) #20	P3H4 (ENSHGLG00000016255) #21	JUP (ENSHGLG00000019242) #22	GAST (ENSHGLG00000013252) #24	ENSHGLG00000014274 ##25	ENSHGLG00000014114	KRT17 (ENSHGLG00000014256) ##27	ENSHGLG00000018762 ##32	KRT14 (ENSHGLG00000014710) #29	ENSHGLG00000017248 ##32	KRT35 (ENSHGLG00000014815) #35	KRT32 (ENSHGLG00000017222) #36	ENSHGLG00000041581	KRT34 (ENSHGLG00000048614)	ENSHGLG00000042231	ENSHGLG00000045464	KRTAP29-1 (ENSHGLG00000047368)	ENSHGLG00000016026
Sciuridae	ANCESTRAL SPECIES	4	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00950000183311 #33	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36
Marmotini	ANCESTRAL SPECIES	8	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000153980.j.a.b.b.c.a
Marmotini_b	ANCESTRAL SPECIES	5	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b.i #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000153980.j.a.b.b.c.a
Arctic ground squirrel	MODERN SPECIES	46	HSPB9 (ENSUPAG00010009527) #7	KAT2A (ENSUPAG00010009504) #8	DHX58 (ENSUPAG00010009486) #9	C17orf113 (ENSUPAG00010009476) #11	ZNF385C (ENSUPAG00010009440) #10	NKIRAS2 (ENSUPAG00010009426) #12	DNAJC7 (ENSUPAG00010009401) #13	CNP (ENSUPAG00010009395) #14	ODAD4 (ENSUPAG00010009389) #15	ACLY (ENSUPAG00010009305) #16	KLHL11 (ENSUPAG00010009300) #17	KLHL10 (ENSUPAG00010009288) #18	NT5C3B (ENSUPAG00010009269) #19	FKBP10 (ENSUPAG00010009227) #20	P3H4 (ENSUPAG00010009210) #21	JUP (ENSUPAG00010009167) #22	HAP1 (ENSUPAG00010009150) #23	GAST (ENSUPAG00010009145) #24	ENSUPAG00010009142 ##25	ENSUPAG00010009125	KRT17 (ENSUPAG00010009109) ##27	KRT16 (ENSUPAG00010009069) #28	KRT14 (ENSUPAG00010009018) #29	KRT9 (ENSUPAG00010009000) #30	KRT19 (ENSUPAG00010008984) ##31	KRT15 (ENSUPAG00010008970) #32	ENSUPAG00010008946 ##32	KRT36 (ENSUPAG00010008919) #34	KRT35 (ENSUPAG00010008898) #35	KRT32 (ENSUPAG00010008877) #36	ENSUPAG00010008855
Squirrel	MODERN SPECIES	90	HSPB9 (ENSSTOG00000006602) #7	RAB5C (ENSSTOG00000006620)	KAT2A (ENSSTOG00000006556) #8	DHX58 (ENSSTOG00000006524) #9	ZNF385C (ENSSTOG00000020287) #10	ENSSTOG00000006159 #12	DNAJC7 (ENSSTOG00000006122) #13	CNP (ENSSTOG00000006116) #14	ODAD4 (ENSSTOG00000006075) #15	ACLY (ENSSTOG00000006029) #16	KLHL11 (ENSSTOG00000026300) #17	KLHL10 (ENSSTOG00000005983) #18	NT5C3B (ENSSTOG00000005969) #19	FKBP10 (ENSSTOG00000005956) #20	P3H4 (ENSSTOG00000028974) #21	JUP (ENSSTOG00000005910) #22	HAP1 (ENSSTOG00000020475) #23	GAST (ENSSTOG00000005906) #24	EIF1 (ENSSTOG00000002719) #25	ENSSTOG00000024700	KRT16 (ENSSTOG00000014410) #28	KRT19 (ENSSTOG00000014403) ##31	KRT15 (ENSSTOG00000014415) #32	ENSSTOG00000014393 ##32	KRT36 (ENSSTOG00000014383) #34	KRT35 (ENSSTOG00000034016) #35	KRT32 (ENSSTOG00000014374) #36	ENSSTOG00000034013	ENSSTOG00000013178	ENSSTOG00000033523	ENSSTOG00000013195
Alpin marmot	MODERN SPECIES	42	KCNH4 (ENSMMMG00000006041)	RAB5C (ENSMMMG00000006088)	KAT2A (ENSMMMG00000006120) #8	DHX58 (ENSMMMG00000006156) #9	ZNF385C (ENSMMMG00000006176) #10	ENSMMMG00000006193 #12	DNAJC7 (ENSMMMG00000006215) #13	CNP (ENSMMMG00000006240) #14	ENSMMMG00000006244 #15	ENSMMMG00000006252 #15	ACLY (ENSMMMG00000006262) #16	KLHL11 (ENSMMMG00000006432) #17	KLHL10 (ENSMMMG00000006440) #18	NT5C3B (ENSMMMG00000006451) #19	FKBP10 (ENSMMMG00000006462) #20	JUP (ENSMMMG00000006521) #22	HAP1 (ENSMMMG00000006582) #23	GAST (ENSMMMG00000006600) #24	ENSMMMG00000006606 ##25	ENSMMMG00000006617	KRT17 (ENSMMMG00000006626) ##27	KRT16 (ENSMMMG00000006635) #28	KRT14 (ENSMMMG00000006660) #29	KRT9 (ENSMMMG00000006665) #30	KRT19 (ENSMMMG00000006685) ##31	KRT15 (ENSMMMG00000006700) #32	ENSMMMG00000006714 ##32	KRT36 (ENSMMMG00000006729) #34	KRT35 (ENSMMMG00000006741) #35	KRT32 (ENSMMMG00000006755) #36	ENSMMMG00000006764
Eurasian red squirrel	MODERN SPECIES	12	HSPB9 (ENSSVLG00005000293) #7	KAT2A (ENSSVLG00005000319) #8	DHX58 (ENSSVLG00005000354) #9	ZNF385C (ENSSVLG00005000419) #10	C17orf113 (ENSSVLG00005000459) #11	ENSSVLG00005000476 #12	ENSSVLG00005000498 #13	CNP (ENSSVLG00005000524) #14	ODAD4 (ENSSVLG00005000556) #15	ACLY (ENSSVLG00005000630) #16	KLHL11 (ENSSVLG00005000699) #17	KLHL10 (ENSSVLG00005000723) #18	NT5C3B (ENSSVLG00005000754) #19	FKBP10 (ENSSVLG00005000785) #20	P3H4 (ENSSVLG00005000841) #21	JUP (ENSSVLG00005000914) #22	ENSSVLG00005001006 #21	ENSSVLG00005001022	HAP1 (ENSSVLG00005001065) #23	ENSSVLG00005001138	GAST (ENSSVLG00005001171) #24	EIF1 (ENSSVLG00005001188) #25	ENSSVLG00005001226	KRT17 (ENSSVLG00005001282) ##27	KRT16 (ENSSVLG00005001321) #28	KRT14 (ENSSVLG00005001357) #29	ENSSVLG00005001389 #30	KRT19 (ENSSVLG00005001412) ##31	KRT15 (ENSSVLG00005001448) #32	KRT13 (ENSSVLG00005001499) #33	KRT36 (ENSSVLG00005001573) #34
Laurasiatheria	ANCESTRAL SPECIES	4	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.b ##25	ENSGT00900000143461 #26	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000162894 #30	ENSGT00940000154403.a.b ##32	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00950000183311 #33	ENSGT00940000161311 #34
Laurasiatheria_a	ANCESTRAL SPECIES	4	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00900000143461 #26	ENSGT00390000015789.d.b.b ##25	ENSGT00390000015789.c.b ##25	ENSGT00940000163247	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000154403.a.b ##32	ENSGT00940000160681.C ##27	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00950000183311 #33
Artiodactyla	ANCESTRAL SPECIES	4	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00900000143461 #26	ENSGT00390000015789.d.b.b ##25	ENSGT00940000163247	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000154403.a.b ##32	ENSGT00940000160681.C ##27	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00950000183311 #33	ENSGT00940000161311 #34
Suina	ANCESTRAL SPECIES		ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00900000143461.a #26	ENSGT00390000015789.d.b.b ##25	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00410000025802.g.a.e	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35
Pig	MODERN SPECIES	3	HSPB9 (ENSSSCG00000017413) #7	KAT2A (ENSSSCG00000017414) #8	DHX58 (ENSSSCG00000017416) #9	ZNF385C (ENSSSCG00000028051) #10	C17orf113 (ENSSSCG00000017417) #11	NKIRAS2 (ENSSSCG00000017418) #12	DNAJC7 (ENSSSCG00000017419) #13	CNP (ENSSSCG00000017420) #14	ODAD4 (ENSSSCG00000017415) #15	ACLY (ENSSSCG00000017421) #16	KLHL11 (ENSSSCG00000032404) #17	KLHL10 (ENSSSCG00000033629) #18	NT5C3B (ENSSSCG00000034779) #19	FKBP10 (ENSSSCG00000017422) #20	P3H4 (ENSSSCG00000017429) #21	JUP (ENSSSCG00000017428) #22	HAP1 (ENSSSCG00000017427) #23	GAST (ENSSSCG00000021910) #24	ENSSSCG00000034799 #26	EIF1 (ENSSSCG00000017430) #25	ENSSSCG00000017433	KRT17 (ENSSSCG00000056910) ##27	ENSSSCG00000055849 #29	ENSSSCG00000017448 #29	ENSSSCG00000017446	KRT19 (ENSSSCG00000058816) ##31	KRT15 (ENSSSCG00000017444) #32	ENSSSCG00000017445 ##32	KRT36 (ENSSSCG00000017437) #34	KRT35 (ENSSSCG00000017438) #35	KRT32 (ENSSSCG00000017439) #36
Chacoan peccary	MODERN SPECIES	941	HSPB9 (ENSCWAG00000013992) #7	KAT2A (ENSCWAG00000013951) #8	DHX58 (ENSCWAG00000013859) #9	C17orf113 (ENSCWAG00000013834) #11	ZNF385C (ENSCWAG00000013739) #10	NKIRAS2 (ENSCWAG00000013695) #12	DNAJC7 (ENSCWAG00000013594) #13	CNP (ENSCWAG00000013494) #14	ODAD4 (ENSCWAG00000013314) #15	ACLY (ENSCWAG00000013042) #16	KLHL11 (ENSCWAG00000012990) #17	KLHL10 (ENSCWAG00000012934) #18	NT5C3B (ENSCWAG00000012755) #19	FKBP10 (ENSCWAG00000012699) #20	P3H4 (ENSCWAG00000012602) #21	JUP (ENSCWAG00000012556) #22	HAP1 (ENSCWAG00000012350) #23	GAST (ENSCWAG00000012317) #24	ENSCWAG00000012296 #26	ENSCWAG00000012269 ##25	ENSCWAG00000012256	ENSCWAG00000012198	KRT17 (ENSCWAG00000012112) ##27	KRT16 (ENSCWAG00000012005) #28	ENSCWAG00000011954	KRT14 (ENSCWAG00000011785) #29	ENSCWAG00000011736	KRT19 (ENSCWAG00000018237) ##31	KRT15 (ENSCWAG00000018128) #32	ENSCWAG00000018009 ##32	KRT36 (ENSCWAG00000017896) #34
Artiodactyla_a	ANCESTRAL SPECIES	3	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000154602.b #28	ENSGT00940000162894 #30	ENSGT00940000154403.a.b ##32	ENSGT00940000160681.C ##27	ENSGT00940000154602.a #29	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00950000183311 #33	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36
Camelidae	ANCESTRAL SPECIES	99															ENSGT00940000156331 #20	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000153980.v	ENSGT00940000163426
Arabian camel	MODERN SPECIES	7	SPATA20 (ENSCDRG00005022016)	CACNA1G (ENSCDRG00005005492)	ABCC3 (ENSCDRG00005004448)	ANKRD40 (ENSCDRG00005004421)	LUC7L3 (ENSCDRG00005004195)	ANKRD40CL (ENSCDRG00005004137)	WFIKKN2 (ENSCDRG00005004111)	TOB1 (ENSCDRG00005004090)	SPAG9 (ENSCDRG00005003908)	NME1 (ENSCDRG00005003807)	ENSCDRG00005003757	ENSCDRG00005003645	MBTD1 (ENSCDRG00005003547)	ENSCDRG00005003445	FKBP10 (ENSCDRG00005003410) #20	JUP (ENSCDRG00005003373) #22	HAP1 (ENSCDRG00005011720) #23	GAST (ENSCDRG00005011677) #24	EIF1 (ENSCDRG00005011615) #25	ENSCDRG00005011549	KRT17 (ENSCDRG00005011420) ##27	KRT14 (ENSCDRG00005011145) #29	ENSCDRG00005011084 #30	KRT19 (ENSCDRG00005011031) ##31	KRT15 (ENSCDRG00005010831) #32	ENSCDRG00005010651 ##32	KRT36 (ENSCDRG00005010467) #34	KRT35 (ENSCDRG00005010292) #35	ENSCDRG00005010183	KRT34 (ENSCDRG00005010086)	ENSCDRG00005009998
Alpaca	MODERN SPECIES	2071																ENSVPAG00000010763 #22
Artiodactyla_b	ANCESTRAL SPECIES	3	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000154403.a.b ##32	ENSGT00940000160681.C ##27	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00950000183311 #33	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36
Cetacea	ANCESTRAL SPECIES	5	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000154602.b #28	ENSGT00940000160681.C ##27	ENSGT00940000154602.a #29	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000162088	ENSGT00940000153980.t
Odontoceti	ANCESTRAL SPECIES	16	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000154602.b #28	ENSGT00940000160681.C ##27	ENSGT00940000154602.a #29	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000163841	ENSGT00940000153980.s
Odontoceti_a	ANCESTRAL SPECIES	14	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338.b #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000162088	ENSGT00940000153980.t
Odontoceti_b	ANCESTRAL SPECIES	16	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338.b #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000154602.b #28	ENSGT00940000160681.C ##27	ENSGT00940000154602.a #29	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00950000183311 #33	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000162088
Monodontidae	ANCESTRAL SPECIES	16	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338.b #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000154602.b #28	ENSGT00940000160681.C ##27	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00950000183311 #33	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000162088	ENSGT00940000163841
Beluga whale	MODERN SPECIES	26	KAT2A (ENSDLEG00000009299) #8	DHX58 (ENSDLEG00000009338) #9	C17orf113 (ENSDLEG00000009393) #11	ZNF385C (ENSDLEG00000009409) #10	NKIRAS2 (ENSDLEG00000009501) #12	DNAJC7 (ENSDLEG00000009536) #13	CNP (ENSDLEG00000010017) #14	TTC25 (ENSDLEG00000010061) #15	ENSDLEG00000010155 #16	ENSDLEG00000010204 #16	KLHL11 (ENSDLEG00000010217) #17	KLHL10 (ENSDLEG00000010222) #18	NT5C3B (ENSDLEG00000010242) #19	FKBP10 (ENSDLEG00000010275) #20	P3H4 (ENSDLEG00000010296) #21	JUP (ENSDLEG00000010325) #22	HAP1 (ENSDLEG00000010394) #23	GAST (ENSDLEG00000010409) #24	EIF1 (ENSDLEG00000010424) #25	ENSDLEG00000010442	KRT36 (ENSDLEG00000010471) ##27	ENSDLEG00000010541 #28	ENSDLEG00000010559 ##32	KRT15 (ENSDLEG00000010588) #32	ENSDLEG00000010656 ##32	KRT35 (ENSDLEG00000010700) #35	KRT32 (ENSDLEG00000011003) #36	ENSDLEG00000011512	KRT33A (ENSDLEG00000011528)	KRT12 (ENSDLEG00000011548)	KRT24 (ENSDLEG00000011564)
Narwhal	MODERN SPECIES	316	HSPB9 (ENSMMNG00015018185) #7	KAT2A (ENSMMNG00015018149) #8	DHX58 (ENSMMNG00015018098) #9	C17orf113 (ENSMMNG00015018072) #11	ZNF385C (ENSMMNG00015017980) #10	NKIRAS2 (ENSMMNG00015017918) #12	DNAJC7 (ENSMMNG00015017885) #13	CNP (ENSMMNG00015017828) #14	ODAD4 (ENSMMNG00015017774) #15	ACLY (ENSMMNG00015017610) #16	KLHL11 (ENSMMNG00015017549) #17	KLHL10 (ENSMMNG00015017518) #18	NT5C3B (ENSMMNG00015017429) #19	FKBP10 (ENSMMNG00015017378) #20	P3H4 (ENSMMNG00015017332) #21	JUP (ENSMMNG00015017262) #22	HAP1 (ENSMMNG00015017229) #23	GAST (ENSMMNG00015017208) #24	EIF1 (ENSMMNG00015017110) #25	ENSMMNG00015017066	ENSMMNG00015017022 ##27	KRT16 (ENSMMNG00015016975) #28	ENSMMNG00015016841 ##27	KRT19 (ENSMMNG00015016751) ##31	KRT15 (ENSMMNG00015016652) #32	KRT13 (ENSMMNG00015016552) #33	KRT36 (ENSMMNG00015016489) #34	KRT35 (ENSMMNG00015016167) #35	KRT32 (ENSMMNG00015016021) #36	ENSMMNG00015015975	ENSMMNG00015020884
Vaquita	MODERN SPECIES	12	RAB5C (ENSPSNG00000015935)	HSPB9 (ENSPSNG00000015910) #7	KAT2A (ENSPSNG00000015835) #8	DHX58 (ENSPSNG00000015781) #9	C17orf113 (ENSPSNG00000015734) #11	ZNF385C (ENSPSNG00000015472) #10	NKIRAS2 (ENSPSNG00000015404) #12	DNAJC7 (ENSPSNG00000015335) #13	ODAD4 (ENSPSNG00000015145) #15	ACLY (ENSPSNG00000014644) #16	KLHL11 (ENSPSNG00000014565) #17	KLHL10 (ENSPSNG00000014471) #18	NT5C3B (ENSPSNG00000014308) #19	FKBP10 (ENSPSNG00000014242) #20	P3H4 (ENSPSNG00000014106) #21	JUP (ENSPSNG00000014058) #22	HAP1 (ENSPSNG00000013642) #23	GAST (ENSPSNG00000013554) #24	ENSPSNG00000013484 ##25	ENSPSNG00000013387	KRT17 (ENSPSNG00000013207) ##27	ENSPSNG00000013136	KRT14 (ENSPSNG00000013111) #29	KRT19 (ENSPSNG00000013067) ##31	KRT15 (ENSPSNG00000012869) #32	KRT13 (ENSPSNG00000012628) #33	KRT36 (ENSPSNG00000012532) #34	KRT35 (ENSPSNG00000012426) #35	ENSPSNG00000012074	ENSPSNG00000011974	ENSPSNG00000011948
Dolphin	MODERN SPECIES	1992	ENSTTRG00000006681	KCNH4 (ENSTTRG00000006676)	RAB5C (ENSTTRG00000006673)	KAT2A (ENSTTRG00000006661) #8	DHX58 (ENSTTRG00000006650) #9	ZNF385C (ENSTTRG00000006632) #10	NKIRAS2 (ENSTTRG00000006623) #12	DNAJC7 (ENSTTRG00000006608) #13	CNP (ENSTTRG00000006607) #14	ODAD4 (ENSTTRG00000006606) #15	ACLY (ENSTTRG00000006605) #16	KLHL10 (ENSTTRG00000006604) #18	NT5C3B (ENSTTRG00000006603) #19	FKBP10 (ENSTTRG00000006602) #20	ENSTTRG00000006599 #21	JUP (ENSTTRG00000006595) #22	HAP1 (ENSTTRG00000006587) #23
Sperm whale	MODERN SPECIES	5	ENSPCTG00005011439	ENSPCTG00005011457	ENSPCTG00005011593	ENSPCTG00005011986	KRT32 (ENSPCTG00005012144) #36	KRT36 (ENSPCTG00005012640) #34	KRT13 (ENSPCTG00005012719) ##32	KRT15 (ENSPCTG00005012795) #32	KRT19 (ENSPCTG00005012929) ##31	KRT14 (ENSPCTG00005013034) #29	ENSPCTG00005013296 #28	ENSPCTG00005013413	ENSPCTG00005013518	EIF1 (ENSPCTG00005013605) #25	GAST (ENSPCTG00005013628) #24	JUP (ENSPCTG00005013691) #22	ENSPCTG00005008818 #16	KLHL11 (ENSPCTG00005008895) #17	KLHL10 (ENSPCTG00005008921) #18	CNP (ENSPCTG00005009018) #14	DNAJC7 (ENSPCTG00005009095) #13	NKIRAS2 (ENSPCTG00005009177) #12	ZNF385C (ENSPCTG00005009258) #10	C17orf113 (ENSPCTG00005009444) #11	STAT5B (ENSPCTG00005009499)	STAT5A (ENSPCTG00005009627)	STAT3 (ENSPCTG00005009757)	ENSPCTG00005009976	EZH1 (ENSPCTG00005010030)	HSD17B1 (ENSPCTG00005010292)	COASY (ENSPCTG00005010374)
Blue whale	MODERN SPECIES	12	HSPB9 (ENSBMSG00010019309) #7	KAT2A (ENSBMSG00010019282) #8	DHX58 (ENSBMSG00010019236) #9	C17orf113 (ENSBMSG00010019211) #11	ZNF385C (ENSBMSG00010019096) #10	NKIRAS2 (ENSBMSG00010019064) #12	ENSBMSG00010019019 #13	CNP (ENSBMSG00010018961) #14	ODAD4 (ENSBMSG00010018938) #15	ACLY (ENSBMSG00010018816) #16	KLHL11 (ENSBMSG00010018763) #17	KLHL10 (ENSBMSG00010018740) #18	NT5C3B (ENSBMSG00010018662) #19	FKBP10 (ENSBMSG00010018627) #20	P3H4 (ENSBMSG00010018588) #21	JUP (ENSBMSG00010018564) #22	HAP1 (ENSBMSG00010018495) #23	GAST (ENSBMSG00010018466) #24	EIF1 (ENSBMSG00010018446) #25	ENSBMSG00010018413	KRT16 (ENSBMSG00010018366) #28	KRT19 (ENSBMSG00010018329) ##31	KRT17 (ENSBMSG00010018066) ##27	KRT36 (ENSBMSG00010017972) #34	KRT32 (ENSBMSG00010017927) #36	ENSBMSG00010017872	ENSBMSG00010017828	ENSBMSG00010017779	ENSBMSG00010017768	ENSBMSG00010017743	ENSBMSG00010017722
Pecora	ANCESTRAL SPECIES	1	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000162088.h
Percora_a	ANCESTRAL SPECIES	2	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000162088.h
Bovidae	ANCESTRAL SPECIES	2	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000162088.h
Caprinae	ANCESTRAL SPECIES	1	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000162088.h	ENSGT00940000162088.g
Rambouillet Sheep	DUPLICATION
Rambouillet Sheep	MODERN SPECIES	2	HSPB9 (ENSOARG00020003146) #7	KAT2A (ENSOARG00020003157) #8	DHX58 (ENSOARG00020003248) #9	ZNF385C (ENSOARG00020003283) #10	C17orf113 (ENSOARG00020003445) #11	NKIRAS2 (ENSOARG00020003458) #12	DNAJC7 (ENSOARG00020003489) #13	CNP (ENSOARG00020003531) #14	ENSOARG00020003645 #15	ACLY (ENSOARG00020004412) #16	KLHL11 (ENSOARG00020004760) #17	KLHL10 (ENSOARG00020004791) #18	NT5C3B (ENSOARG00020004822) #19	FKBP10 (ENSOARG00020004898) #20	P3H4 (ENSOARG00020004940) #21	ENSOARG00020004981 #22	GAST (ENSOARG00020005021) #24	EIF1 (ENSOARG00020005044) #25	ENSOARG00020005122	KRT17 (ENSOARG00020005240) #29	KRT16 (ENSOARG00020005408) #28	KRT9 (ENSOARG00020005450) #30	KRT19 (ENSOARG00020005482) ##31	KRT15 (ENSOARG00020005512) #32	ENSOARG00020005568 ##32	KRT36 (ENSOARG00020005599) #34	KRT35 (ENSOARG00020005640) #35	KRT32 (ENSOARG00020005669) #36	K38 (ENSOARG00020005694)	ENSOARG00020005752	ENSOARG00020005824
Rambouillet Sheep	MODERN SPECIES	17	ERO1B (ENSOARG00020018369)	EDARADD (ENSOARG00020018503)	LGALS8 (ENSOARG00020018619)	HEATR1 (ENSOARG00020018840)	ACTN2 (ENSOARG00020019247)	MTR (ENSOARG00020019401)	RYR2 (ENSOARG00020019907)	ENSOARG00020020560	ZP4 (ENSOARG00020020715)	CHRM3 (ENSOARG00020020814)	ZNF33B (ENSOARG00020020852)	ENSOARG00020020945	ZNF25 (ENSOARG00020020987)	ENSOARG00020021022	ZNF248 (ENSOARG00020021209)	ENSOARG00020021255 #22	ENSOARG00020021277	BMS1 (ENSOARG00020021336)	ENSOARG00020021502	RET (ENSOARG00020021522)	ENSOARG00020021602	CSGALNACT2 (ENSOARG00020021613)	RASGEF1A (ENSOARG00020021661)	FXYD4 (ENSOARG00020021800)	ENSOARG00020021844	BICC1 (ENSOARG00020021901)	PHYHIPL (ENSOARG00020022039)	FAM13C (ENSOARG00020022210)	SLC16A9 (ENSOARG00020023213)	MRLN (ENSOARG00020023237)	CCDC6 (ENSOARG00020023260)
Goat	MODERN SPECIES	10	RAB5C (ENSCHIG00000012960)	HSPB9 (ENSCHIG00000011056) #7	KAT2A (ENSCHIG00000021124) #8	DHX58 (ENSCHIG00000017011) #9	ZNF385C (ENSCHIG00000013858) #10	NKIRAS2 (ENSCHIG00000027127) #12	DNAJC7 (ENSCHIG00000026453) #13	CNP (ENSCHIG00000007203) #14	ODAD4 (ENSCHIG00000015441) #15	ACLY (ENSCHIG00000023185) #16	KLHL11 (ENSCHIG00000016423) #17	KLHL10 (ENSCHIG00000017147) #18	NT5C3B (ENSCHIG00000010072) #19	FKBP10 (ENSCHIG00000021843) #20	P3H4 (ENSCHIG00000026227) #21	JUP (ENSCHIG00000026333) #22	ENSCHIG00000012489 #24	EIF1 (ENSCHIG00000019997) #25	ENSCHIG00000012495	KRT17 (ENSCHIG00000010632) ##27	KRT16 (ENSCHIG00000011368) #28	KRT14 (ENSCHIG00000014749) #29	KRT19 (ENSCHIG00000024513) ##31	KRT15 (ENSCHIG00000018811) #32	ENSCHIG00000019803 ##32	KRT36 (ENSCHIG00000023701) #34	KRT35 (ENSCHIG00000015373) #35	KRT32 (ENSCHIG00000010085) #36	ENSCHIG00000012357	ENSCHIG00000027083	ENSCHIG00000021923
Bovinae	ANCESTRAL SPECIES		ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00950000183311 #33	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36
Bos	ANCESTRAL SPECIES	1	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000162088.h
Bos_b	ANCESTRAL SPECIES	21	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000162088.h
Hybrid Bos Indicus	MODERN SPECIES	10	RAB5C (ENSBIXG00005031506)	HSPB9 (ENSBIXG00005031505) #7	KAT2A (ENSBIXG00005031504) #8	DHX58 (ENSBIXG00005031503) #9	ENSBIXG00005031502 #10	ENSBIXG00005031501 ##12	DNAJC7 (ENSBIXG00005031499) #13	CNP (ENSBIXG00005031498) #14	ODAD4 (ENSBIXG00005031497) #15	ACLY (ENSBIXG00005031496) #16	KLHL10 (ENSBIXG00005031488) #18	KLHL11 (ENSBIXG00005031480) #17	NT5C3B (ENSBIXG00005031485) #19	FKBP10 (ENSBIXG00005031478) #20	P3H4 (ENSBIXG00005031475) #21	JUP (ENSBIXG00005031472) #22	ENSBIXG00005031468	ENSBIXG00005031464 #23	ENSBIXG00005031457 ##25	KRT16 (ENSBIXG00005031444) #28	KRT9 (ENSBIXG00005031441) #30	KRT15 (ENSBIXG00005031436) #32	ENSBIXG00005031421 ##32	KRT36 (ENSBIXG00005031418) #34	ENSBIXG00005031414	ENSBIXG00005031411	KRT35 (ENSBIXG00005031406) #35	KRTAP17-1 (ENSBIXG00005031391)	ENSBIXG00005031390	ENSBIXG00005031386	ENSBIXG00005031382
Cow	MODERN SPECIES	10	KAT2A (ENSBTAG00000044019) #8	DHX58 (ENSBTAG00000046580) #9	C19H17orf113 (ENSBTAG00000048660) #11	ZNF385C (ENSBTAG00000046162) #10	NKIRAS2 (ENSBTAG00000002657) #12	DNAJC7 (ENSBTAG00000002654) #13	CNP (ENSBTAG00000025762) #14	ODAD4 (ENSBTAG00000013698) #15	ENSBTAG00000050335	ACLY (ENSBTAG00000016740) #16	KLHL11 (ENSBTAG00000050549) #17	KLHL10 (ENSBTAG00000011459) #18	NT5C3B (ENSBTAG00000011456) #19	FKBP10 (ENSBTAG00000011454) #20	P3H4 (ENSBTAG00000025752) #21	JUP (ENSBTAG00000017685) #22	HAP1 (ENSBTAG00000052414) #23	GAST (ENSBTAG00000017663) #24	EIF1 (ENSBTAG00000002282) #25	KRT42 (ENSBTAG00000047262)	KRT17 (ENSBTAG00000006806) ##27	KRT16 (ENSBTAG00000033766) #28	KRT14 (ENSBTAG00000007583) #29	KRT9 (ENSBTAG00000047165) #30	KRT19 (ENSBTAG00000004905) ##31	KRT15 (ENSBTAG00000004903) #32	ENSBTAG00000050581 ##32	KRT36 (ENSBTAG00000046124) #34	KRT35 (ENSBTAG00000006807) #35	KRT32 (ENSBTAG00000016384) #36	ENSBTAG00000053139
Bos_a	ANCESTRAL SPECIES		ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.d.b.b ##25	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00950000183311 #33	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36
Wild yak	MODERN SPECIES	1070	HSPB9 (ENSBMUG00000016684) #7	KAT2A (ENSBMUG00000016697) #8	DHX58 (ENSBMUG00000016709) #9	C17orf113 (ENSBMUG00000016743) #11	ENSBMUG00000016751 #10	NKIRAS2 (ENSBMUG00000016764) #12	DNAJC7 (ENSBMUG00000016797) #13	CNP (ENSBMUG00000016827) #14	ODAD4 (ENSBMUG00000016849) #15	ACLY (ENSBMUG00000016958) #16	KLHL11 (ENSBMUG00000017001) #17	KLHL10 (ENSBMUG00000017009) #18	NT5C3B (ENSBMUG00000017029) #19	FKBP10 (ENSBMUG00000017449) #20	P3H4 (ENSBMUG00000017565) #21	JUP (ENSBMUG00000017607) #22	ENSBMUG00000017638 #23	GAST (ENSBMUG00000017661) #24	EIF1 (ENSBMUG00000017706) ##25	ENSBMUG00000017757	ENSBMUG00000017780 ##27
Domestic yak	MODERN SPECIES	10	KCNH4 (ENSBGRG00000011609)	RAB5C (ENSBGRG00000011839)	KAT2A (ENSBGRG00000012012) #8	DHX58 (ENSBGRG00000012275) #9	ZNF385C (ENSBGRG00000012653) #10	NKIRAS2 (ENSBGRG00000012994) #12	DNAJC7 (ENSBGRG00000013112) #13	CNP (ENSBGRG00000013438) #14	ODAD4 (ENSBGRG00000013496) #15	ACLY (ENSBGRG00000013734) #16	KLHL11 (ENSBGRG00000014094) #17	KLHL10 (ENSBGRG00000014148) #18	NT5C3B (ENSBGRG00000014235) #19	FKBP10 (ENSBGRG00000010797) #20	P3H4 (ENSBGRG00000010956) #21	JUP (ENSBGRG00000011117) #22	ENSBGRG00000011203 #23	GAST (ENSBGRG00000011383) #24	EIF1 (ENSBGRG00000011435) #25	ENSBGRG00000011563	ENSBGRG00000011650	KRT17 (ENSBGRG00000011737) ##27	KRT16 (ENSBGRG00000011885) #28	KRT14 (ENSBGRG00000012060) #29	KRT15 (ENSBGRG00000012171) #32	KRT13 (ENSBGRG00000012388) #33	KRT36 (ENSBGRG00000012678) #34	KRT35 (ENSBGRG00000012767) #35	KRT32 (ENSBGRG00000012910) #36	ENSBGRG00000012989	ENSBGRG00000013088
American bison	MODERN SPECIES	3101	HSPB9 (ENSBBBG00000010576) #7	KAT2A (ENSBBBG00000010563) #8	DHX58 (ENSBBBG00000010490) #9	ZNF385C (ENSBBBG00000010480) #10	C17orf113 (ENSBBBG00000010462) #11	NKIRAS2 (ENSBBBG00000010459) #12	DNAJC7 (ENSBBBG00000010451) #13	ENSBBBG00000010433	ODAD4 (ENSBBBG00000010428) #15	ACLY (ENSBBBG00000010403) #16	KLHL11 (ENSBBBG00000010289) #17	KLHL10 (ENSBBBG00000010283) #18	NT5C3B (ENSBBBG00000010279) #19	FKBP10 (ENSBBBG00000010271) #20	P3H4 (ENSBBBG00000010264) #21	JUP (ENSBBBG00000000043) #22	ENSBBBG00000000074 #23	GAST (ENSBBBG00000000082) #24	EIF1 (ENSBBBG00000000085) #25	ENSBBBG00000000098	KRT17 (ENSBBBG00000000113) ##27	KRT16 (ENSBBBG00000000131) #28	KRT14 (ENSBBBG00000010236) #29	KRT19 (ENSBBBG00000001735) ##31	ENSBBBG00000010227	ENSBBBG00000010225 #32	KRT13 (ENSBBBG00000010222) #33	KRT36 (ENSBBBG00000010205) #34	ENSBBBG00000010199 #35	KRT32 (ENSBBBG00000010194) #36	ENSBBBG00000010190
Siberian musk deer	MODERN SPECIES	1210	HSPB9 (ENSMMSG00000015518) #7	KAT2A (ENSMMSG00000015477) #8	DHX58 (ENSMMSG00000015446) #9	C17orf113 (ENSMMSG00000015422) #11	ZNF385C (ENSMMSG00000015322) #10	NKIRAS2 (ENSMMSG00000015289) #12	DNAJC7 (ENSMMSG00000015219) #13	CNP (ENSMMSG00000015179) #14	ENSMMSG00000015153 #15	ACLY (ENSMMSG00000015010) #16	KLHL11 (ENSMMSG00000014976) #17	KLHL10 (ENSMMSG00000014955) #18	NT5C3B (ENSMMSG00000014916) #19	FKBP10 (ENSMMSG00000014870) #20	P3H4 (ENSMMSG00000014823) #21	JUP (ENSMMSG00000014793) #22	ENSMMSG00000014728 #23	GAST (ENSMMSG00000014708) #24	ENSMMSG00000014646	ENSMMSG00000014623	ENSMMSG00000014615 #30	KRT15 (ENSMMSG00000014445) #32	KRT36 (ENSMMSG00000014382) #34	KRT35 (ENSMMSG00000014347) #35	KRT32 (ENSMMSG00000014330) #36	ENSMMSG00000014311	ENSMMSG00000014285	ENSMMSG00000014270	KRT34 (ENSMMSG00000014235)	ENSMMSG00000014203	KRT33A (ENSMMSG00000014172)
Yarkand deer	MODERN SPECIES	28	KCNH4 (ENSCHYG00000008672)	HSPB9 (ENSCHYG00000008654) #7	RAB5C (ENSCHYG00000008631)	KAT2A (ENSCHYG00000008506) #8	DHX58 (ENSCHYG00000008429) #9	ENSCHYG00000008188 #10	NKIRAS2 (ENSCHYG00000008120) #12	DNAJC7 (ENSCHYG00000008058) #13	CNP (ENSCHYG00000008034) #14	ODAD4 (ENSCHYG00000008005) #15	ACLY (ENSCHYG00000007603) #16	KLHL10 (ENSCHYG00000007545) #18	NT5C3B (ENSCHYG00000007451) #19	FKBP10 (ENSCHYG00000007407) #20	P3H4 (ENSCHYG00000007262) #21	JUP (ENSCHYG00000007147) #22	ENSCHYG00000006989 #23	GAST (ENSCHYG00000006960) #24	ENSCHYG00000006928 ##25	KRT16 (ENSCHYG00000006828) #28	ENSCHYG00000006786 #30	KRT36 (ENSCHYG00000006721) #34	ENSCHYG00000006665	KRT14 (ENSCHYG00000006340) #29	KRTAP17-1 (ENSCHYG00000006285)	KRTAP16-1 (ENSCHYG00000006270)	ENSCHYG00000006258	ENSCHYG00000006250	ENSCHYG00000006103	ENSCHYG00000006077	ENSCHYG00000006067
Laurasiatheria_b	ANCESTRAL SPECIES	4	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000163444 #37
Carnivora	ANCESTRAL SPECIES	9	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000163444 #37
Caniformia	ANCESTRAL SPECIES	6	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000163444 #37
Caniformia_b	ANCESTRAL SPECIES	20	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000174154	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000163444 #37
Ursidae	ANCESTRAL SPECIES	19	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000174154	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183.d #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000162088
Ursus	ANCESTRAL SPECIES	79	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000174154	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183.d #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.b ##25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000162088.m.a
American black bear	MODERN SPECIES	426	DHX58 (ENSUAMG00000024348) #9	C17orf113 (ENSUAMG00000024596) #11	ZNF385C (ENSUAMG00000024598) #10	NKIRAS2 (ENSUAMG00000024602) #12	DNAJC7 (ENSUAMG00000024604) #13	CNP (ENSUAMG00000024608) #14	ENSUAMG00000024610 #15	ENSUAMG00000024611 #15	ACLY (ENSUAMG00000024612) #16	ENSUAMG00000024614	KLHL11 (ENSUAMG00000024615) #17	KLHL10 (ENSUAMG00000024616) #18	ENSUAMG00000024617 #19	FKBP10 (ENSUAMG00000024618) #20	P3H4 (ENSUAMG00000024620) #21	JUP (ENSUAMG00000024621) #22	HAP1 (ENSUAMG00000024622) #23	GAST (ENSUAMG00000024623) #24
Polar bear	MODERN SPECIES	231	KAT2A (ENSUMAG00000023038) #8	DHX58 (ENSUMAG00000023000) #9	ZNF385C (ENSUMAG00000022993) #10	NKIRAS2 (ENSUMAG00000022990) #12	DNAJC7 (ENSUMAG00000022907) #13	ENSUMAG00000022870 #14	ODAD4 (ENSUMAG00000022857) #15	ENSUMAG00000022852	ACLY (ENSUMAG00000022569) #16	KLHL11 (ENSUMAG00000022524) #17	KLHL10 (ENSUMAG00000022517) #18	ENSUMAG00000022511 #19	ENSUMAG00000022503 #20	ENSUMAG00000022500 #20	P3H4 (ENSUMAG00000022486) #21	JUP (ENSUMAG00000022433) #22	GAST (ENSUMAG00000022415) #24	ENSUMAG00000022413 ##25	ENSUMAG00000022412	ENSUMAG00000022411	ENSUMAG00000022410 ##27	ENSUMAG00000022409 #30	KRT15 (ENSUMAG00000022408) #32	ENSUMAG00000022405 ##32	KRT36 (ENSUMAG00000022403) #34	KRT35 (ENSUMAG00000022402) #35	KRT32 (ENSUMAG00000022401) #36	ENSUMAG00000022398	ENSUMAG00000022393	ENSUMAG00000022392	ENSUMAG00000022389
Giant Panda	MODERN SPECIES	4	RAB5C (ENSAMEG00000006003)	KAT2A (ENSAMEG00000005952) #8	DHX58 (ENSAMEG00000005941) #9	C17orf113 (ENSAMEG00000024863) #11	ZNF385C (ENSAMEG00000005930) #10	ENSAMEG00000030927 #12	DNAJC7 (ENSAMEG00000005906) #13	CNP (ENSAMEG00000005894) #14	ODAD4 (ENSAMEG00000005874) #15	ACLY (ENSAMEG00000005809) #16	KLHL11 (ENSAMEG00000005803) #17	KLHL10 (ENSAMEG00000005782) #18	NT5C3B (ENSAMEG00000005754) #19	FKBP10 (ENSAMEG00000005703) #20	P3H4 (ENSAMEG00000005700) #21	JUP (ENSAMEG00000005649) #22	HAP1 (ENSAMEG00000005636) #23	GAST (ENSAMEG00000005630) #24	EIF1 (ENSAMEG00000005620) #25	ENSAMEG00000029853	ENSAMEG00000023481	KRT9 (ENSAMEG00000027196) #30	KRT16 (ENSAMEG00000005579) #28	ENSAMEG00000028827	ENSAMEG00000025134	ENSAMEG00000027447	ENSAMEG00000027894	ENSAMEG00000028834	ENSAMEG00000008411	ENSAMEG00000019943	ENSAMEG00000026945
Mustelinae	ANCESTRAL SPECIES	1	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000174154	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00950000183311 #33	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000163444 #37
Ferret	MODERN SPECIES	336	KAT2A (ENSMPUG00000010560) #8	DHX58 (ENSMPUG00000010568) #9	ZNF385C (ENSMPUG00000010573) #10	ENSMPUG00000010575	NKIRAS2 (ENSMPUG00000010580) #12	DNAJC7 (ENSMPUG00000010601) #13	CNP (ENSMPUG00000010608) #14	ODAD4 (ENSMPUG00000010622) #15	ACLY (ENSMPUG00000010652) #16	KLHL11 (ENSMPUG00000010711) #17	KLHL10 (ENSMPUG00000010715) #18	NT5C3B (ENSMPUG00000010759) #19	FKBP10 (ENSMPUG00000010810) #20	P3H4 (ENSMPUG00000010815) #21	ENSMPUG00000010869	JUP (ENSMPUG00000010872) #22	ENSMPUG00000010877	GAST (ENSMPUG00000010880) #24	EIF1 (ENSMPUG00000010883) #25	KRT16 (ENSMPUG00000010912) #28	KRT14 (ENSMPUG00000010916) #29	KRT19 (ENSMPUG00000010928) ##31	ENSMPUG00000010966 ##32	KRT36 (ENSMPUG00000010994) #34	KRT35 (ENSMPUG00000011003) #35	KRT32 (ENSMPUG00000011051) #36	ENSMPUG00000011074	ENSMPUG00000011088	ENSMPUG00000011104	ENSMPUG00000011115	ENSMPUG00000011180
American mink	MODERN SPECIES	354	KAT2A (ENSNVIG00000012127) #8	DHX58 (ENSNVIG00000012091) #9	C17orf113 (ENSNVIG00000012082) #11	ZNF385C (ENSNVIG00000012056) #10	KBRS2 (ENSNVIG00000012006) #12	DNAJC7 (ENSNVIG00000011979) #13	CNP (ENSNVIG00000011958) #14	ODAD4 (ENSNVIG00000011931) #15	ENSNVIG00000011910	ACLY (ENSNVIG00000011741) #16	KLHL11 (ENSNVIG00000011712) #17	KLHL10 (ENSNVIG00000011693) #18	NT5C3B (ENSNVIG00000011670) #19	FKBP10 (ENSNVIG00000011651) #20	P3H4 (ENSNVIG00000011616) #21	JUP (ENSNVIG00000011585) #22	GAST (ENSNVIG00000011578) #24	EIF1 (ENSNVIG00000011568) #25	ENSNVIG00000011549	KRT17 (ENSNVIG00000011527) ##27	KRT16 (ENSNVIG00000011506) #28	KRT14 (ENSNVIG00000011484) #29	KRT9 (ENSNVIG00000011463) #30	KRT19 (ENSNVIG00000011452) ##31	ENSNVIG00000011420 #32	KRT13 (ENSNVIG00000011365) #33	KRT36 (ENSNVIG00000011351) #34	KRT35 (ENSNVIG00000011324) #35	KRT32 (ENSNVIG00000011313) #36	ENSNVIG00000011302 #37	ENSNVIG00000011275 #37
Canidae	ANCESTRAL SPECIES	2	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202.f #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000162088.k.a
Canis_lupus	ANCESTRAL SPECIES	3	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202.f #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000162088.k.a
Dog	MODERN SPECIES	37	RAB5C (ENSCAFG00845010240)	KAT2A (ENSCAFG00845010287) #8	DHX58 (ENSCAFG00845010366) #9	ZNF385C (ENSCAFG00845010430) #10	C17orf113 (ENSCAFG00845010493) #11	NKIRAS2 (ENSCAFG00845010527) #12	DNAJC7 (ENSCAFG00845010658) #13	CNP (ENSCAFG00845010898) #14	ODAD4 (ENSCAFG00845010985) #15	ACLY (ENSCAFG00845011071) #16	KLHL11 (ENSCAFG00845011380) #17	KLHL10 (ENSCAFG00845011409) #18	NT5C3B (ENSCAFG00845011477) #19	FKBP10 (ENSCAFG00845011553) #20	P3H4 (ENSCAFG00845011597) #21	JUP (ENSCAFG00845011719) #22	HAP1 (ENSCAFG00845011841) #23	GAST (ENSCAFG00845011939) #24	EIF1 (ENSCAFG00845011975) #25	KRT15 (ENSCAFG00845012157) #29	KRT9 (ENSCAFG00845012484) #30	KRT36 (ENSCAFG00845012542) #34	KRT35 (ENSCAFG00845012643) #35	KRT32 (ENSCAFG00845012695) #36	ENSCAFG00845012768 #37	ENSCAFG00845012830 #37	KRT41 (ENSCAFG00845012892)	KRT31 (ENSCAFG00845012938)	ENSCAFG00845012970	KRT33B (ENSCAFG00845012998)	ENSCAFG00845013050
Dingo	MODERN SPECIES	150	HSPB9 (ENSCAFG00020013540) #7	KAT2A (ENSCAFG00020013546) #8	DHX58 (ENSCAFG00020013642) #9	C17orf113 (ENSCAFG00020013966) #11	ZNF385C (ENSCAFG00020013967) #10	NKIRAS2 (ENSCAFG00020013970) #12	DNAJC7 (ENSCAFG00020013975) #13	CNP (ENSCAFG00020013999) #14	ODAD4 (ENSCAFG00020014002) #15	ACLY (ENSCAFG00020014153) #16	KLHL11 (ENSCAFG00020018252) #17	KLHL10 (ENSCAFG00020018256) #18	NT5C3B (ENSCAFG00020018261) #19	FKBP10 (ENSCAFG00020018262) #20	P3H4 (ENSCAFG00020018265) #21	JUP (ENSCAFG00020018267) #22	HAP1 (ENSCAFG00020018269) #23	GAST (ENSCAFG00020018277) #24	ENSCAFG00020018280 #25	ENSCAFG00020018283	KRT17 (ENSCAFG00020018290) ##27	KRT16 (ENSCAFG00020018298) #28	KRT14 (ENSCAFG00020018313) #29	KRT9 (ENSCAFG00020018328) #30	KRT19 (ENSCAFG00020018332) ##31	KRT15 (ENSCAFG00020018335) #32	ENSCAFG00020018347 ##32	KRT36 (ENSCAFG00020018355) #34	KRT35 (ENSCAFG00020018365) #35	KRT32 (ENSCAFG00020018375) #36	ENSCAFG00020018383
Red fox	MODERN SPECIES	241	KAT2A (ENSVVUG00000021134) #8	DHX58 (ENSVVUG00000020914) #9	C17orf113 (ENSVVUG00000020912) #11	ZNF385C (ENSVVUG00000020910) #10	NKIRAS2 (ENSVVUG00000020909) #12	DNAJC7 (ENSVVUG00000019218) #13	ENSVVUG00000019124	CNP (ENSVVUG00000019121) #14	TTC25 (ENSVVUG00000019117) #15	ACLY (ENSVVUG00000019109) #16	KLHL11 (ENSVVUG00000019107) #17	KLHL10 (ENSVVUG00000019104) #18	NT5C3B (ENSVVUG00000019081) #19	FKBP10 (ENSVVUG00000019076) #20	P3H4 (ENSVVUG00000019047) #21	JUP (ENSVVUG00000019027) #22	HAP1 (ENSVVUG00000019013) #23	GAST (ENSVVUG00000018998) #24	ENSVVUG00000018993 #25	ENSVVUG00000018984	KRT17 (ENSVVUG00000018970) ##27	KRT16 (ENSVVUG00000018933) #28	KRT14 (ENSVVUG00000018897) #29	KRT9 (ENSVVUG00000018879) #30	KRT19 (ENSVVUG00000018871) ##31	KRT15 (ENSVVUG00000018852) #32	ENSVVUG00000018818 ##32	KRT36 (ENSVVUG00000018803) #34	KRT35 (ENSVVUG00000018791) #35	KRT32 (ENSVVUG00000018779) #36	ENSVVUG00000018769
Felidae	ANCESTRAL SPECIES	8	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000163444 #37
Panthera	ANCESTRAL SPECIES	42	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000162088.i.a
Panthera_a	ANCESTRAL SPECIES	13	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00950000183311 #33	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36
leopard	MODERN SPECIES	177	RAB5C (ENSPPRG00000005745)	HSPB9 (ENSPPRG00000015872) #7	KAT2A (ENSPPRG00000005293) #8	DHX58 (ENSPPRG00000004933) #9	ZNF385C (ENSPPRG00000004788) #10	C17orf113 (ENSPPRG00000003642) #11	NKIRAS2 (ENSPPRG00000003498) #12	DNAJC7 (ENSPPRG00000002991) #13	CNP (ENSPPRG00000002512) #14	ACLY (ENSPPRG00000001884) #16	KLHL11 (ENSPPRG00000021994) #17	KLHL10 (ENSPPRG00000020089) #18	NT5C3B (ENSPPRG00000018568) #19	FKBP10 (ENSPPRG00000016170) #20	P3H4 (ENSPPRG00000013330) #21	JUP (ENSPPRG00000013021) #22	HAP1 (ENSPPRG00000010532) #23	GAST (ENSPPRG00000007220) #24	EIF1 (ENSPPRG00000006944) #25	ENSPPRG00000006409	KRT17 (ENSPPRG00000005972) ##27	KRT16 (ENSPPRG00000005644) #28	KRT14 (ENSPPRG00000005571) #29	ENSPPRG00000005162 #30	KRT19 (ENSPPRG00000004847) ##31	KRT15 (ENSPPRG00000004815) #32	KRT13 (ENSPPRG00000004124) #33	KRT36 (ENSPPRG00000003313) #34	KRT35 (ENSPPRG00000002629) #35	KRT32 (ENSPPRG00000002037) #36	ENSPPRG00000001868
lion	MODERN SPECIES	14	HSPB9 (ENSPLOG00000006762) #7	KAT2A (ENSPLOG00000006689) #8	DHX58 (ENSPLOG00000006668) #9	C17orf113 (ENSPLOG00000006650) #11	ZNF385C (ENSPLOG00000006604) #10	NKIRAS2 (ENSPLOG00000006565) #12	DNAJC7 (ENSPLOG00000006528) #13	CNP (ENSPLOG00000006502) #14	ODAD4 (ENSPLOG00000006404) #15	ACLY (ENSPLOG00000006328) #16	KLHL11 (ENSPLOG00000006281) #17	KLHL10 (ENSPLOG00000006239) #18	NT5C3B (ENSPLOG00000006095) #19	FKBP10 (ENSPLOG00000005972) #20	P3H4 (ENSPLOG00000005908) #21	JUP (ENSPLOG00000005881) #22	HAP1 (ENSPLOG00000005794) #23	GAST (ENSPLOG00000005753) #24	EIF1 (ENSPLOG00000005737) #25	ENSPLOG00000005690	KRT17 (ENSPLOG00000005579) ##27	KRT16 (ENSPLOG00000005540) #28	KRT14 (ENSPLOG00000005486) #29	KRT9 (ENSPLOG00000005436) #30	KRT19 (ENSPLOG00000017023) ##31	ENSPLOG00000016896 ##32	KRT36 (ENSPLOG00000016234) #34	KRT35 (ENSPLOG00000016035) #35	KRT32 (ENSPLOG00000015965) #36	ENSPLOG00000015831 #37	ENSPLOG00000015759 #37
Tiger	MODERN SPECIES	268	HSPB9 (ENSPTIG00000009844) #7	KAT2A (ENSPTIG00000008088) #8	DHX58 (ENSPTIG00000007982) #9	C17orf113 (ENSPTIG00000007863) #11	ZNF385C (ENSPTIG00000007806) #10	NKIRAS2 (ENSPTIG00000007686) #12	ENSPTIG00000007675	DNAJC7 (ENSPTIG00000007500) #13	CNP (ENSPTIG00000007387) #14	ACLY (ENSPTIG00000006131) #16	KLHL11 (ENSPTIG00000006057) #17	KLHL10 (ENSPTIG00000005743) #18	NT5C3B (ENSPTIG00000005655) #19	FKBP10 (ENSPTIG00000005540) #20	P3H4 (ENSPTIG00000005444) #21	JUP (ENSPTIG00000005326) #22	GAST (ENSPTIG00000005313) #24	ENSPTIG00000005249 ##25	ENSPTIG00000005071	KRT17 (ENSPTIG00000004921) ##27	KRT16 (ENSPTIG00000004811) #28	KRT9 (ENSPTIG00000003392) #30	KRT19 (ENSPTIG00000003328) ##31	KRT15 (ENSPTIG00000002144) #32	ENSPTIG00000000005 ##32	KRT36 (ENSPTIG00000019860) #34	KRT35 (ENSPTIG00000019786) #35	KRT32 (ENSPTIG00000019689) #36	ENSPTIG00000019673	ENSPTIG00000019630	ENSPTIG00000019510
Cat	MODERN SPECIES	245	RAB5C (ENSFCAG00000002148)	KAT2A (ENSFCAG00000002146) #8	DHX58 (ENSFCAG00000002145) #9	C17orf113 (ENSFCAG00000044511) #11	ZNF385C (ENSFCAG00000002143) #10	ENSFCAG00000049077	DNAJC7 (ENSFCAG00000002142) #13	CNP (ENSFCAG00000022165) #14	ODAD4 (ENSFCAG00000002141) #15	ACLY (ENSFCAG00000002140) #16	KLHL11 (ENSFCAG00000042359) #17	KLHL10 (ENSFCAG00000002139) #18	NT5C3B (ENSFCAG00000023499) #19	FKBP10 (ENSFCAG00000002137) #20	P3H4 (ENSFCAG00000002135) #21	JUP (ENSFCAG00000002133) #22	GAST (ENSFCAG00000038911) #24	ENSFCAG00000038592 #25	KRT17 (ENSFCAG00000012443)	KRT9 (ENSFCAG00000012438) #30	ENSFCAG00000042651 ##31	ENSFCAG00000001928 ##32	KRT36 (ENSFCAG00000039608) #34	ENSFCAG00000042331	KRT32 (ENSFCAG00000032558) #36	ENSFCAG00000051934	ENSFCAG00000045780	ENSFCAG00000053497	ENSFCAG00000045055	ENSFCAG00000040679	ENSFCAG00000027774
Laurasiatheria_c	ANCESTRAL SPECIES	3	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00390000015789.c.b ##25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36
Chiroptera	ANCESTRAL SPECIES	2	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00390000014792 #24	ENSGT00390000015789.c.b ##25	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000162088
Megabat	MODERN SPECIES	3315												KLHL10 (ENSPVAG00000010637) #18	NT5C3B (ENSPVAG00000010634) #19	FKBP10 (ENSPVAG00000010633) #20	P3H4 (ENSPVAG00000010632) #21	JUP (ENSPVAG00000010631) #22	HAP1 (ENSPVAG00000010630) #23	EIF1 (ENSPVAG00000010629) #25	ENSPVAG00000010628	KRT17 (ENSPVAG00000010627) ##27	KRT16 (ENSPVAG00000010626) #28	KRT14 (ENSPVAG00000010625) #29	KRT19 (ENSPVAG00000010624) ##31	KRT15 (ENSPVAG00000010623) #32	ENSPVAG00000010622 ##32	KRT36 (ENSPVAG00000010620) #34	KRT35 (ENSPVAG00000010619) #35	KRT32 (ENSPVAG00000010617) #36	ENSPVAG00000010615	ENSPVAG00000010613	ENSPVAG00000010612
Microchiroptera	ANCESTRAL SPECIES		ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36	ENSGT00940000163841	ENSGT00940000153980	ENSGT00940000163426
Microbat	MODERN SPECIES	2340																JUP (ENSMLUG00000004652) #22
Greater horseshoe bat	MODERN SPECIES	13	HSPB9 (ENSRFEG00010007500) #7	KAT2A (ENSRFEG00010007441) #8	DHX58 (ENSRFEG00010007386) #9	C17orf113 (ENSRFEG00010007359) #11	ZNF385C (ENSRFEG00010007294) #10	NKIRAS2 (ENSRFEG00010007217) #12	DNAJC7 (ENSRFEG00010007117) #13	CNP (ENSRFEG00010007013) #14	ODAD4 (ENSRFEG00010006870) #15	ACLY (ENSRFEG00010006679) #16	KLHL11 (ENSRFEG00010006602) #17	KLHL10 (ENSRFEG00010006571) #18	NT5C3B (ENSRFEG00010006487) #19	FKBP10 (ENSRFEG00010006435) #20	P3H4 (ENSRFEG00010006374) #21	JUP (ENSRFEG00010006328) #22	GAST (ENSRFEG00010006301) #24	ENSRFEG00010006281 ##25	ENSRFEG00010006195	KRT16 (ENSRFEG00010006107) #28	KRT14 (ENSRFEG00010005886) #29	KRT36 (ENSRFEG00010005718) #34	KRT35 (ENSRFEG00010005678) #35	KRT32 (ENSRFEG00010005648) #36	ENSRFEG00010005611	KRT34 (ENSRFEG00010005505)	ENSRFEG00010005390	KRT33A (ENSRFEG00010005367)	KRTAP17-1 (ENSRFEG00010005341)	KRTAP16-1 (ENSRFEG00010005331)	KRTAP29-1 (ENSRFEG00010019825)
Equus	ANCESTRAL SPECIES		ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00900000143461 #26	ENSGT00390000015789.c.b ##25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000162894 #30	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00950000183311 #33	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000161991 #36
Donkey	MODERN SPECIES	4	HSPB9 (ENSEASG00005009283) #7	KAT2A (ENSEASG00005009207) #8	DHX58 (ENSEASG00005009112) #9	C17orf113 (ENSEASG00005009106) #11	ZNF385C (ENSEASG00005009102) #10	NKIRAS2 (ENSEASG00005034516) #12	DNAJC7 (ENSEASG00005008451) #13	CNP (ENSEASG00005008413) #14	ODAD4 (ENSEASG00005008408) #15	ACLY (ENSEASG00005006843) #16	KLHL11 (ENSEASG00005006716) #17	KLHL10 (ENSEASG00005006713) #18	NT5C3B (ENSEASG00005006708) #19	FKBP10 (ENSEASG00005006696) #20	P3H4 (ENSEASG00005006689) #21	JUP (ENSEASG00005006685) #22	HAP1 (ENSEASG00005006673) #23	GAST (ENSEASG00005033317) #24	ENSEASG00005024501 #26	EIF1 (ENSEASG00005036736) ##25	ENSEASG00005006661	KRT17 (ENSEASG00005006658) ##27	KRT16 (ENSEASG00005006656) #28	KRT14 (ENSEASG00005006654) #29	KRT9 (ENSEASG00005029948) #30	KRT19 (ENSEASG00005024924) ##31	KRT15 (ENSEASG00005006648) #32	KRT13 (ENSEASG00005006646) #33	KRT36 (ENSEASG00005006643) #34	KRT35 (ENSEASG00005006641) #35	KRT32 (ENSEASG00005006638) #36
Horse	MODERN SPECIES	2	KCNH4 (ENSECAG00000024953)	RAB5C (ENSECAG00000025054)	HSPB9 (ENSECAG00000048612) #7	ZNF385C (ENSECAG00000016402) #10	C17orf113 (ENSECAG00000033155) #11	DNAJC7 (ENSECAG00000018542) #13	ENSECAG00000060293	CNP (ENSECAG00000050930) #14	CNP (ENSECAG00000002521) #15	ACLY (ENSECAG00000009702) #16	KLHL11 (ENSECAG00000021494) #17	KLHL10 (ENSECAG00000021523) #18	NT5C3B (ENSECAG00000023153) #19	FKBP10 (ENSECAG00000013089) #20	P3H4 (ENSECAG00000020280) #21	JUP (ENSECAG00000020592) #22	HAP1 (ENSECAG00000010380) #23	GAST (ENSECAG00000012504) #24	KRT42 (ENSECAG00000015705) ##27	KRT16 (ENSECAG00000053848) #28	ENSECAG00000034483 #30	KRT36 (ENSECAG00000057997) #34	KRT15 (ENSECAG00000017274) #35	KRT39 (ENSECAG00000012849) #36	KRT38 (ENSECAG00000012909)	KRT34 (ENSECAG00000001081)	KRT33B (ENSECAG00000015178)	KRTAP16-1 (ENSECAG00000010427)	ENSECAG00000010460	ENSECAG00000035840	ENSECAG00000052248
Eulipotyphla	ANCESTRAL SPECIES	2596																ENSGT00940000156395 #22	ENSGT00390000015789.c.b ##25
Common shrew	MODERN SPECIES	5379																JUP (ENSSARG00000006316) #22	ENSSARG00000006287 ##25
Hedgehog	MODERN SPECIES	6898																ENSEEUG00000010828 #22
Atlantogenata	ANCESTRAL SPECIES	1	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00940000163247	ENSGT00940000160681.C ##27	ENSGT00940000154602.b #28	ENSGT00940000154602.a #29	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000162088	ENSGT00940000161991 #36	ENSGT00940000153980
Xenarthra	ANCESTRAL SPECIES	56	ENSGT00940000154971	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000156395 #22
Armadillo	MODERN SPECIES	2950	RAB5C (ENSDNOG00000038853)	HSPB9 (ENSDNOG00000046956) #7	KAT2A (ENSDNOG00000044850) #8	DHX58 (ENSDNOG00000043127) #9	ENSDNOG00000036922 #11	ENSDNOG00000008734 #10	NKIRAS2 (ENSDNOG00000042963) #12	DNAJC7 (ENSDNOG00000004861) #13	CNP (ENSDNOG00000004854) #14	ODAD4 (ENSDNOG00000046290) #15	ACLY (ENSDNOG00000004829) #16	KLHL11 (ENSDNOG00000004827) #17	KLHL10 (ENSDNOG00000004822) #18	NT5C3B (ENSDNOG00000004815) #19	FKBP10 (ENSDNOG00000039668) #20	JUP (ENSDNOG00000004800) #22
Afrotheria	ANCESTRAL SPECIES	2	ENSGT00940000154971	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.b ##25	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000162088	ENSGT00940000161991 #36	ENSGT00940000153980	ENSGT00940000163426	ENSGT00940000163658	ENSGT00940000156135	ENSGT00940000163931
Tenrec	MODERN SPECIES	7054																JUP (ENSETEG00000019463) #22
Afrotheria_a	ANCESTRAL SPECIES	2	ENSGT00940000154971	ENSGT00510000049735 #7	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.b ##25	ENSGT00940000155258.t ##31	ENSGT00940000154403.a.a #32	ENSGT00940000154403.a.b ##32	ENSGT00940000161311 #34	ENSGT00940000161787 #35	ENSGT00940000162088	ENSGT00940000161991 #36	ENSGT00940000153980	ENSGT00940000163426	ENSGT00940000163658	ENSGT00940000156135	ENSGT00940000163931
Elephant	MODERN SPECIES	310	RAB5C (ENSLAFG00000008015)	HSPB9 (ENSLAFG00000008014) #7	KAT2A (ENSLAFG00000008004) #8	DHX58 (ENSLAFG00000027301) #9	ZNF385C (ENSLAFG00000013959) #10	NKIRAS2 (ENSLAFG00000027238) #12	DNAJC7 (ENSLAFG00000013944) #13	CNP (ENSLAFG00000013941) #14	ODAD4 (ENSLAFG00000022415) #15	ACLY (ENSLAFG00000006961) #16	KLHL11 (ENSLAFG00000006960) #17	KLHL10 (ENSLAFG00000006967) #18	NT5C3B (ENSLAFG00000014155) #19	FKBP10 (ENSLAFG00000021916) #20	P3H4 (ENSLAFG00000005055) #21	JUP (ENSLAFG00000002854) #22	HAP1 (ENSLAFG00000008228) #23	GAST (ENSLAFG00000008225) #24	EIF1 (ENSLAFG00000002852) ##25	KRT17 (ENSLAFG00000011402) ##27	KRT14 (ENSLAFG00000017548) #29	KRT19 (ENSLAFG00000027762) ##31	KRT15 (ENSLAFG00000017535) #32	ENSLAFG00000004694 ##32	KRT36 (ENSLAFG00000004692) #34	KRT35 (ENSLAFG00000004691) #35	ENSLAFG00000017206	KRT32 (ENSLAFG00000017179) #36	ENSLAFG00000017176	ENSLAFG00000028624	ENSLAFG00000020912
Hyrax	MODERN SPECIES	5693													NT5C3B (ENSPCAG00000012280) #19	FKBP10 (ENSPCAG00000012204) #20	P3H4 (ENSPCAG00000012088) #21	JUP (ENSPCAG00000011945) #22
Marsupialia	ANCESTRAL SPECIES	3	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00950000182812.A	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183.a.a #23	ENSGT00940000162183.b #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25
Opossum	MODERN SPECIES	1	KAT2A (ENSMODG00000014788) #8	DHX58 (ENSMODG00000014782) #9	ZNF385C (ENSMODG00000014774) #10	ENSMODG00000031964	NKIRAS2 (ENSMODG00000014766) #12	DNAJC7 (ENSMODG00000014760) #13	ENSMODG00000045840	CNP (ENSMODG00000014742) #14	ODAD4 (ENSMODG00000014741) #15	ACLY (ENSMODG00000014738) #16	KLHL11 (ENSMODG00000014725) #17	KLHL10 (ENSMODG00000014695) #18	NT5C3B (ENSMODG00000014723) #19	FKBP10 (ENSMODG00000014716) #20	P3H4 (ENSMODG00000014702) #21	JUP (ENSMODG00000014681) #22	ENSMODG00000014659 #23	GAST (ENSMODG00000014656) #24	ENSMODG00000014651 ##25	ENSMODG00000024140	ENSMODG00000014647	KRT17 (ENSMODG00000014587) ##27	ENSMODG00000014628 #29	ENSMODG00000040104	ENSMODG00000036809 #30	ENSMODG00000036504 #30	ENSMODG00000014625 #30	ENSMODG00000014608 ##32	KRT15 (ENSMODG00000038367) #32	KRT36 (ENSMODG00000014529) #34	KRT35 (ENSMODG00000014510) #35
Marsupialia_b	ANCESTRAL SPECIES	26	ENSGT00940000154971	ENSGT00940000158799.o #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b.e #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183.b #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25
Diprotodontia	ANCESTRAL SPECIES	33	ENSGT00940000154971	ENSGT00940000158799.o #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b.e #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183.b #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25	ENSGT00390000015789.d.b.b ##25	ENSGT00940000163247	ENSGT00940000154602.d #29	ENSGT00940000162894 #30	ENSGT00940000154602.c #29
Diprotodontia_a	ANCESTRAL SPECIES	32	ENSGT00940000154971	ENSGT00940000158799.o #8	ENSGT00940000153173.b.b #9	ENSGT00940000154994.b #11	ENSGT00940000157202 #10	ENSGT00940000157943.b.e #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183.b #23	ENSGT00390000014792 #24	ENSGT00390000015789.c.a.b #25
Common wonbat	MODERN SPECIES	1034	RAB5C (ENSVURG00010021939)	KAT2A (ENSVURG00010021945) #8	DHX58 (ENSVURG00010021951) #9	ENSVURG00010021959	ZNF385C (ENSVURG00010021961) #10	NKIRAS2 (ENSVURG00010021963) #12	DNAJC7 (ENSVURG00010021964) #13	CNP (ENSVURG00010021969) #14	ENSVURG00010021971 #15	ACLY (ENSVURG00010021975) #16	KLHL11 (ENSVURG00010022000) #17	KLHL10 (ENSVURG00010022008) #18	NT5C3B (ENSVURG00010022013) #19	FKBP10 (ENSVURG00010022023) #20	P3H4 (ENSVURG00010022032) #21	JUP (ENSVURG00010022043) #22	ENSVURG00010022063 #23	GAST (ENSVURG00010022068) #24	EIF1 (ENSVURG00010022071) #25	KRT36 (ENSVURG00010022095) #34	KRT13 (ENSVURG00010022121) #33	ENSVURG00010022128	ENSVURG00010022136	ENSVURG00010022141	ENSVURG00010022145	ENSVURG00010022150
koala	MODERN SPECIES	230	KAT2A (ENSPCIG00000020226) #8	LGP2 (ENSPCIG00000020229) #9	C17orf113 (ENSPCIG00000035067) #11	ZNF385C (ENSPCIG00000020238) #10	ENSPCIG00000020241 #12	DNAJC7 (ENSPCIG00000020251) #13	CNP (ENSPCIG00000020254) #14	ENSPCIG00000015444 #15	ENSPCIG00000015437 #15	ACLY (ENSPCIG00000015427) #16	KLHL11 (ENSPCIG00000015423) #17	KLHL10 (ENSPCIG00000015419) #18	NT5C3B (ENSPCIG00000015408) #19	FKBP10 (ENSPCIG00000015404) #20	P3H4 (ENSPCIG00000015400) #21	JUP (ENSPCIG00000015390) #22	ENSPCIG00000015384 #23	GAST (ENSPCIG00000015381) #24	ENSPCIG00000004517 ##25	ENSPCIG00000010888	ENSPCIG00000010886 #29	ENSPCIG00000008602 #30	ENSPCIG00000010887 #29	KRT15 (ENSPCIG00000022904) #32	ENSPCIG00000022903 ##32	KRT36 (ENSPCIG00000022898) #34	KRT35 (ENSPCIG00000002402) #35	KRT32 (ENSPCIG00000002521) #36	ENSPCIG00000005989 #37	ENSPCIG00000005993	ENSPCIG00000006005
Wallaby	MODERN SPECIES	8253																ENSMEUG00000011364 #22
Tasmanian devil	MODERN SPECIES	3	RAB5C (ENSSHAG00000005267)	ENSSHAG00000028135 #8	DHX58 (ENSSHAG00000021205) #9	ENSSHAG00000031428	ZNF385C (ENSSHAG00000006918) #10	NKIRAS2 (ENSSHAG00000007355) #12	DNAJC7 (ENSSHAG00000007478) #13	CNP (ENSSHAG00000021184) #14	ENSSHAG00000027204	ACLY (ENSSHAG00000000861) #16	KLHL11 (ENSSHAG00000020775) #17	KLHL10 (ENSSHAG00000001640) #18	NT5C3B (ENSSHAG00000002012) #19	FKBP10 (ENSSHAG00000003034) #20	P3H4 (ENSSHAG00000002449) #21	JUP (ENSSHAG00000004334) #22	ENSSHAG00000022578 #23	ENSSHAG00000005125 #23	GAST (ENSSHAG00000005479) #24	ENSSHAG00000024650 ##25	ENSSHAG00000006799	KRT17 (ENSSHAG00000006929) ##27	ENSSHAG00000007222 #29	ENSSHAG00000007493 #29	KRT9 (ENSSHAG00000001231) #30	KRT19 (ENSSHAG00000003178) ##31	KRT15 (ENSSHAG00000003577) #32	KRT13 (ENSSHAG00000004067) #33	KRT36 (ENSSHAG00000004477) #34	KRT35 (ENSSHAG00000004914) #35	KRT32 (ENSSHAG00000005214) #36
Platypus	MODERN SPECIES	2	HCRT (ENSOANG00000036684)	RAB5C (ENSOANG00000045966)	KAT2A (ENSOANG00000009954) #8	DHX58 (ENSOANG00000043287) #9	ENSOANG00000043379	ENSOANG00000004705 #10	NKIRAS2 (ENSOANG00000004704) #12	DNAJC7 (ENSOANG00000001098) #13	ENSOANG00000048433 #14	ODAD4 (ENSOANG00000001099) #15	KLHL11 (ENSOANG00000047551) #17	ACLY (ENSOANG00000005788) #16	KLHL10 (ENSOANG00000012657) #18	NT5C3B (ENSOANG00000048924) #19	ENSOANG00000041176 #21	JUP (ENSOANG00000013831) #22	ENSOANG00000051036 #23	FKBP10 (ENSOANG00000003836) #20	ENSOANG00000050443	ENSOANG00000015781 #30	ENSOANG00000015780 #29	ENSOANG00000010482 ##32	ENSOANG00000007598 #34	ENSOANG00000007600	ENSOANG00000014897	ENSOANG00000014895	ENSOANG00000004712	ENSOANG00000013102	ENSOANG00000004440 #34	ENSOANG00000048040	ENSOANG00000042332
Sauria	ANCESTRAL SPECIES	26	ENSGT00670000098179	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00950000182812.A	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT01030000235196	ENSGT00390000015789.c #25	ENSGT00950000182969.B.c.a.a.c.f.a	ENSGT00940000155258.t ##31	ENSGT00390000015789.d ##25	ENSGT00940000163247	ENSGT00940000165820.B	ENSGT00950000182969.B.c.a.a.c.f.b	ENSGT00940000165820.A	ENSGT00940000154403.b ##32	ENSGT00940000161311.d #34	ENSGT00940000161311.c #34	ENSGT00940000161077	ENSGT00940000161855
Archelosauria	ANCESTRAL SPECIES	21	ENSGT00670000098179	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00950000182812.A	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT01030000235196	ENSGT00390000015789.c #25	ENSGT00950000182969.B.c.a.a.c.f.a	ENSGT00940000155258.t ##31	ENSGT00390000015789.d ##25	ENSGT00940000163247	ENSGT00940000165820.B	ENSGT00950000182969.B.c.a.a.c.f.b	ENSGT00940000165820.A	ENSGT00940000154403.b ##32	ENSGT00940000161311.d #34	ENSGT00940000161311.c #34	ENSGT00940000161077	ENSGT00940000161855
Cryptodira	ANCESTRAL SPECIES	23	ENSGT00670000098179	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00950000182812.A	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT01030000235196	ENSGT00390000015789.c #25	ENSGT00940000155258.t ##31	ENSGT00940000163247	ENSGT00950000182969.B.c.a.a.c.f.b	ENSGT00940000165820.A	ENSGT00940000154403.b ##32	ENSGT00940000161077	ENSGT00940000161855	ENSGT00950000182969.B.c.a.a.d	ENSGT00940000159382	ENSGT00940000161783.b	ENSGT00940000159655	ENSGT00390000003628.b
Testudinoidea	ANCESTRAL SPECIES	19	ENSGT00950000185241.c	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00950000182812.A	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT01030000235196	ENSGT00390000015789.c #25	ENSGT00940000155258.t ##31	ENSGT00940000163247.w	ENSGT00940000163247.v	ENSGT00950000182969.B.c.a.a.c.f.b	ENSGT00940000165820.A	ENSGT00940000154403.b ##32	ENSGT00940000161077	ENSGT00950000182969.B.c.a.a.d	ENSGT00940000159382.d	ENSGT00940000161783.b	ENSGT00940000159655	ENSGT00390000003628.b
Emydidae	ANCESTRAL SPECIES	26	ENSGT00950000185241.c	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00950000182812.A	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT01030000235196	ENSGT00390000015789.c #25	ENSGT00940000155258.t ##31	ENSGT00940000163247.w	ENSGT00940000163247.v	ENSGT00950000182969.B.c.a.a.c.f.b	ENSGT00940000165820.A	ENSGT00940000154403.b ##32	ENSGT00940000161077	ENSGT00950000182969.B.c.a.a.d	ENSGT00940000159382.d	ENSGT00940000161783.b	ENSGT00940000159655	ENSGT00390000003628.b
Three-toed box turtle	MODERN SPECIES	91	RAB5C (ENSTMTG00000005672)	DHX58 (ENSTMTG00000005685) #9	ENSTMTG00000005711 #10	ENSTMTG00000005729	ENSTMTG00000005733 #10	NKIRAS2 (ENSTMTG00000005744) #12	DNAJC7 (ENSTMTG00000005835) #13	CNP (ENSTMTG00000006824) #14	ODAD4 (ENSTMTG00000006839) #15	ACLY (ENSTMTG00000006881) #16	KLHL11 (ENSTMTG00000007004) #17	KLHL10 (ENSTMTG00000007021) #18	NT5C3B (ENSTMTG00000007037) #19	FKBP10 (ENSTMTG00000007058) #20	P3H4 (ENSTMTG00000007081) #21	JUP (ENSTMTG00000007105) #22	ENSTMTG00000007181 #23	ENSTMTG00000007574	EIF1 (ENSTMTG00000007588) #25	ENSTMTG00000007603 ##31	ENSTMTG00000007628	ENSTMTG00000007662	ENSTMTG00000007676	ENSTMTG00000007705 ##32	KRT15 (ENSTMTG00000007720) ##32	KRT23 (ENSTMTG00000007749)	ENSTMTG00000007803	KRT12 (ENSTMTG00000008143)	KRT24 (ENSTMTG00000008250)	KRT222 (ENSTMTG00000008270)	SMARCE1 (ENSTMTG00000008288)
painted turtle	MODERN SPECIES	2394	KAT2A (ENSCPBG00000006907) #8	DHX58 (ENSCPBG00000006804) #9	ENSCPBG00000006797	ZNF385C (ENSCPBG00000006782) #10	NKIRAS2 (ENSCPBG00000006772) #12	DNAJC7 (ENSCPBG00000006760) #13	CNP (ENSCPBG00000006750) #14	ODAD4 (ENSCPBG00000006714) #15	ACLY (ENSCPBG00000006669) #16	KLHL11 (ENSCPBG00000006632) #17	KLHL10 (ENSCPBG00000006629) #18	NT5C3B (ENSCPBG00000006621) #19	FKBP10 (ENSCPBG00000006612) #20	P3H4 (ENSCPBG00000006605) #21	ENSCPBG00000006602	JUP (ENSCPBG00000006592) #22	ENSCPBG00000006587 #23	ENSCPBG00000006570	ENSCPBG00000006566	ENSCPBG00000006557	ENSCPBG00000006527	ENSCPBG00000006507	ENSCPBG00000006500 ##32	KRT15 (ENSCPBG00000006494) ##32	KRT23 (ENSCPBG00000006488)	ENSCPBG00000005869	KRT12 (ENSCPBG00000005794)	KRT24 (ENSCPBG00000005755)	KRT222 (ENSCPBG00000005743)	SMARCE1 (ENSCPBG00000005734)	CCR7 (ENSCPBG00000005728)
Testudinidae	ANCESTRAL SPECIES	24	ENSGT00670000098179.q	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000157202 #10	ENSGT00950000182812.A	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT01030000235196	ENSGT00390000015789.c #25	ENSGT00940000163247.w	ENSGT00940000163247.v	ENSGT00950000182969.B.c.a.a.c.f.b	ENSGT00940000165820.A	ENSGT00940000154403.b ##32	ENSGT00940000161077	ENSGT00950000182969.B.c.a.a.d	ENSGT00940000159382.d	ENSGT00940000161783.b	ENSGT00940000159655	ENSGT00390000003628.b	ENSGT01030000234667.a.a.a.a.b
Goode s thornscrub tortoise	MODERN SPECIES	15	ENSGEVG00005008481	KAT2A (ENSGEVG00005008716) #8	DHX58 (ENSGEVG00005010247) #9	ZNF385C (ENSGEVG00005010297) #10	ENSGEVG00005010382	NKIRAS2 (ENSGEVG00005010454) #12	DNAJC7 (ENSGEVG00005010483) #13	CNP (ENSGEVG00005010526) #14	ODAD4 (ENSGEVG00005010597) #15	ACLY (ENSGEVG00005010903) #16	KLHL11 (ENSGEVG00005010959) #17	KLHL10 (ENSGEVG00005011024) #18	NT5C3B (ENSGEVG00005011091) #19	FKBP10 (ENSGEVG00005011165) #20	P3H4 (ENSGEVG00005011368) #21	JUP (ENSGEVG00005011560) #22	ENSGEVG00005011615 #23	ENSGEVG00005011873	EIF1 (ENSGEVG00005011907) #25	ENSGEVG00005011929	ENSGEVG00005012012	ENSGEVG00005012106	ENSGEVG00005012196	ENSGEVG00005012379	ENSGEVG00005012618	ENSGEVG00005012756 ##32	KRT15 (ENSGEVG00005012829) ##32	KRT23 (ENSGEVG00005012916)	ENSGEVG00005013074	KRT12 (ENSGEVG00005013775)	SMARCE1 (ENSGEVG00005014242)
Abingdon island giant tortoise	MODERN SPECIES	1384	ENSCABG00000015150	ENSCABG00000015149	KAT2A (ENSCABG00000014692) #8	DHX58 (ENSCABG00000014690) #9	ZNF385C (ENSCABG00000014686) #10	NKIRAS2 (ENSCABG00000014683) #12	DNAJC7 (ENSCABG00000013543) #13	CNP (ENSCABG00000013533) #14	ODAD4 (ENSCABG00000013530) #15	ACLY (ENSCABG00000011752) #16	KLHL11 (ENSCABG00000011694) #17	KLHL10 (ENSCABG00000011693) #18	NT5C3B (ENSCABG00000011692) #19	FKBP10 (ENSCABG00000011687) #20	P3H4 (ENSCABG00000011671) #21	JUP (ENSCABG00000011670) #22	ENSCABG00000011669 #23	ENSCABG00000011667	ENSCABG00000011664	ENSCABG00000011663	ENSCABG00000011659	ENSCABG00000011657	ENSCABG00000011651	ENSCABG00000011642	ENSCABG00000011634	ENSCABG00000011629 ##32	ENSCABG00000011624 ##32	KRT23 (ENSCABG00000011620)	ENSCABG00000011586	KRT12 (ENSCABG00000011355)	KRT24 (ENSCABG00000011350)
Chinese turtle	MODERN SPECIES	401													ENSPSIG00000002752 #19	FKBP10 (ENSPSIG00000002740) #20	P3H4 (ENSPSIG00000002702) #21	JUP (ENSPSIG00000002691) #22	ENSPSIG00000002686	EIF1 (ENSPSIG00000002672) #25	ENSPSIG00000002669	ENSPSIG00000002668	ENSPSIG00000002643	ENSPSIG00000002638	KRT15 (ENSPSIG00000002628) ##32	KRT23 (ENSPSIG00000002604)	ENSPSIG00000002600	KRT19 (ENSPSIG00000002599) ##31	ENSPSIG00000002598	ENSPSIG00000002065	ENSPSIG00000002596	ENSPSIG00000002595	KRT222 (ENSPSIG00000002590)
Archosauria	ANCESTRAL SPECIES	20	ENSGT00670000098179	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00950000182812.A	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT01030000235196	ENSGT00390000015789.c #25	ENSGT00940000165820.B	ENSGT00950000182969.B.c.a.a.c.f.b	ENSGT00940000165820.A.c.b	ENSGT00940000165820.A.c.a	ENSGT00950000182969.B.c.a.a.c.f.a	ENSGT00940000155258.t ##31	ENSGT00940000154403.b ##32	ENSGT00940000161311.d #34	ENSGT00940000161311.c #34	ENSGT00940000161077	ENSGT00940000161855	ENSGT00940000159382
Aves	ANCESTRAL SPECIES	26	ENSGT00670000098179.r	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00950000182812.A	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT01030000235196	ENSGT00390000015789.c #25	ENSGT00940000165820.A.c.b	ENSGT00940000165820.A.c.a	ENSGT00950000182969.B.c.a.a.c.f.a	ENSGT00940000155258.t ##31	ENSGT00940000154403.b ##32	ENSGT00940000161077	ENSGT00940000161855	ENSGT00940000159382	ENSGT00940000159655	ENSGT00390000003628.b	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142
Neognathae	ANCESTRAL SPECIES	23	ENSGT00670000098179.r	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00950000182812.A	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT01030000235196	ENSGT00390000015789.c #25	ENSGT00940000163247.u	ENSGT00940000165820.B	ENSGT00950000182969.B.c.a.a.c.f.b	ENSGT00940000165820.A.c.b	ENSGT00940000165820.A.c.a	ENSGT00950000182969.B.c.a.a.c.f.a	ENSGT00940000155258.t ##31	ENSGT00940000154403.b ##32	ENSGT00940000161077	ENSGT00940000161855	ENSGT00940000159382	ENSGT00940000159655
Neognathae_b	ANCESTRAL SPECIES	23	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000157202.b #10	ENSGT00950000182812.A	ENSGT00940000157202.a #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT01030000235196	ENSGT00390000015789.c #25	ENSGT00940000163247.u	ENSGT00940000165820.B	ENSGT00950000182969.B.c.a.a.c.f.b	ENSGT00940000160849.o	ENSGT00940000165820.A.c.b	ENSGT00940000165820.A.c.a	ENSGT00950000182969.B.c.a.a.c.f.a	ENSGT00940000155258.t ##31	ENSGT00940000154403.b ##32	ENSGT00940000161077	ENSGT00940000161855	ENSGT00940000159382
Neognathae_c	ANCESTRAL SPECIES	26	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000157202.b #10	ENSGT00950000182812.A	ENSGT00940000157202.a #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT01030000235196	ENSGT00390000015789.c #25	ENSGT00940000163247.u	ENSGT00940000163247.t	ENSGT00940000165820.B	ENSGT00950000182969.B.c.a.a.c.f.b	ENSGT00940000160849.o	ENSGT00940000165820.A.c.b	ENSGT00940000165820.A.c.a	ENSGT00950000182969.B.c.a.a.c.f.a	ENSGT00940000155258.t ##31	ENSGT00940000154403.b ##32	ENSGT00940000161077	ENSGT00940000161855
Kakapo	MODERN SPECIES	12	KAT2A (ENSSHBG00005012033) #8	DHX58 (ENSSHBG00005011969) #9	ENSSHBG00005011950	ENSSHBG00005011929 #10	ENSSHBG00005011921 #10	NKIRAS2 (ENSSHBG00005011903) #12	DNAJC7 (ENSSHBG00005011878) #13	CNP (ENSSHBG00005000727) #14	ODAD4 (ENSSHBG00005014857) #15	ACLY (ENSSHBG00005014817) #16	KLHL11 (ENSSHBG00005014800) #17	KLHL10 (ENSSHBG00005014792) #18	NT5C3B (ENSSHBG00005014785) #19	FKBP10 (ENSSHBG00005014777) #20	P3H4 (ENSSHBG00005014770) #21	JUP (ENSSHBG00005014758) #22	COPZ2 (ENSSHBG00005014730)	NFE2L1 (ENSSHBG00005014718)	CBX1 (ENSSHBG00005014707)	ENSSHBG00005014697	SKAP1 (ENSSHBG00005014653)	HOXB1 (ENSSHBG00005014632)	HOXB2 (ENSSHBG00005014624)	HOXB3 (ENSSHBG00005014612)	ENSSHBG00005014606	HOXB6 (ENSSHBG00005014592)	HOXB5 (ENSSHBG00005014586)	HOXB7 (ENSSHBG00005014576)	HOXB8 (ENSSHBG00005014570)	HOXB9 (ENSSHBG00005014566)	HOXB13 (ENSSHBG00005014551)
Golden eagle	MODERN SPECIES	24	KAT2A (ENSACCG00020001972) #8	DHX58 (ENSACCG00020002017) #9	ENSACCG00020002053 #10	ENSACCG00020002069	ENSACCG00020002081 #10	NKIRAS2 (ENSACCG00020002097) #12	DNAJC7 (ENSACCG00020002132) #13	CNP (ENSACCG00020002165) #14	ODAD4 (ENSACCG00020002212) #15	ACLY (ENSACCG00020002290) #16	KLHL11 (ENSACCG00020002337) #17	KLHL10 (ENSACCG00020002349) #18	NT5C3B (ENSACCG00020002366) #19	FKBP10 (ENSACCG00020002383) #20	P3H4 (ENSACCG00020002413) #21	JUP (ENSACCG00020002451) #22	ENSACCG00020002472 #23	ENSACCG00020002490	ENSACCG00020002498	EIF1 (ENSACCG00020002514) #25	ENSACCG00020002559	ENSACCG00020002592	ENSACCG00020002614	ENSACCG00020002631	ENSACCG00020002646 #34	ENSACCG00020002661	ENSACCG00020002680	ENSACCG00020002765	ENSACCG00020002840	KRT19 (ENSACCG00020002860) ##31	KRT15 (ENSACCG00020002881) ##32
Passeriformes	ANCESTRAL SPECIES	29	ENSGT00670000098179.r	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00950000182812.A	ENSGT00940000157202.a #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT01030000235196	ENSGT00390000015789.c #25	ENSGT00940000163247.u	ENSGT00940000165820.B	ENSGT00950000182969.B.c.a.a.c.f.b	ENSGT00940000160849.o	ENSGT00940000165820.A.c.b	ENSGT00940000165820.A.c.a	ENSGT00950000182969.B.c.a.a.c.f.a	ENSGT00940000155258.t ##31	ENSGT00940000154403.b ##32	ENSGT00940000161077	ENSGT00940000161855	ENSGT00940000159382
Great tit	MODERN SPECIES	20	ENSPMJG00000001107	KAT2A (ENSPMJG00000001104) #8	DHX58 (ENSPMJG00000001094) #9	ENSPMJG00000001089	ZNF385C (ENSPMJG00000001087) #10	NKIRAS2 (ENSPMJG00000001076) #12	DNAJC7 (ENSPMJG00000001071) #13	CNP (ENSPMJG00000001067) #14	ODAD4 (ENSPMJG00000001062) #15	ACLY (ENSPMJG00000001014) #16	KLHL11 (ENSPMJG00000001012) #17	KLHL10 (ENSPMJG00000001010) #18	NT5C3B (ENSPMJG00000001008) #19	FKBP10 (ENSPMJG00000001007) #20	P3H4 (ENSPMJG00000001004) #21	JUP (ENSPMJG00000000991) #22	ENSPMJG00000000941	EIF1 (ENSPMJG00000000936) ##25	ENSPMJG00000000917	KRT13 (ENSPMJG00000000913) #33	ENSPMJG00000000768	ENSPMJG00000000388	ENSPMJG00000000358	ENSPMJG00000000335	KRT19 (ENSPMJG00000000323) ##31	KRT15 (ENSPMJG00000000316) ##32	KRT23 (ENSPMJG00000000306)	KRT20 (ENSPMJG00000000284)	KRT12 (ENSPMJG00000000279)	KRT222 (ENSPMJG00000000276)	SMARCE1 (ENSPMJG00000000262)
Passeriformes_d	ANCESTRAL SPECIES	25	ENSGT00670000098179.r	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000157202.a #10	ENSGT00950000182812.A	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT01030000235196	ENSGT00390000015789.c #25	ENSGT00940000163247.u	ENSGT00940000165820.B	ENSGT00950000182969.B.c.a.a.c.f.b	ENSGT00940000160849.o	ENSGT00940000165820.A.c.b	ENSGT00940000165820.A.c.a	ENSGT00950000182969.B.c.a.a.c.f.a.f	ENSGT00940000155258.t ##31	ENSGT00940000154403.b ##32	ENSGT00940000161077	ENSGT00940000161855	ENSGT00940000159382
Flycatcher	MODERN SPECIES	19	KAT2A (ENSFALG00000000656) #8	DHX58 (ENSFALG00000000653) #9	ZNF385C (ENSFALG00000000647) #10	ENSFALG00000000649	ENSFALG00000023489	NKIRAS2 (ENSFALG00000023807) #12	DNAJC7 (ENSFALG00000000639) #13	CNP (ENSFALG00000000635) #14	ODAD4 (ENSFALG00000000633) #15	ACLY (ENSFALG00000000631) #16	KLHL11 (ENSFALG00000000630) #17	KLHL10 (ENSFALG00000000629) #18	NT5C3B (ENSFALG00000000628) #19	FKBP10 (ENSFALG00000000626) #20	P3H4 (ENSFALG00000000622) #21	JUP (ENSFALG00000000297) #22	ENSFALG00000000310 #23	ENSFALG00000000312	EIF1 (ENSFALG00000000314) #25	ENSFALG00000026044	ENSFALG00000000318	ENSFALG00000023326	ENSFALG00000027809 #33	ENSFALG00000000327	ENSFALG00000000331	ENSFALG00000000335	KRT19 (ENSFALG00000000341) ##31	KRT15 (ENSFALG00000000346) ##32	KRT23 (ENSFALG00000000349)	KRT20 (ENSFALG00000000350)	KRT12 (ENSFALG00000000351)
Passeriformes_g	ANCESTRAL SPECIES	26	ENSGT00670000098179.r	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000157202.a #10	ENSGT00950000182812.A	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT01030000235196	ENSGT00390000015789.c #25	ENSGT00940000163247.u	ENSGT00940000165820.B	ENSGT00950000182969.B.c.a.a.c.f.b	ENSGT00940000160849.o	ENSGT00940000165820.A.c.b	ENSGT00940000165820.A.c.a	ENSGT00950000182969.B.c.a.a.c.f.a.f	ENSGT00940000155258.t ##31	ENSGT00940000154403.b ##32	ENSGT00940000161077	ENSGT00940000161855	ENSGT00940000159382
Medium ground finch	MODERN SPECIES	363				ENSGFOG00000005165	ZNF385C (ENSGFOG00000005161) #10	NKIRAS2 (ENSGFOG00000005148) #12	DNAJC7 (ENSGFOG00000005132) #13	CNP (ENSGFOG00000005123) #14	ODAD4 (ENSGFOG00000005099) #15	ACLY (ENSGFOG00000005083) #16	KLHL11 (ENSGFOG00000005064) #17	KLHL10 (ENSGFOG00000005051) #18	NT5C3B (ENSGFOG00000005036) #19	FKBP10 (ENSGFOG00000005026) #20	P3H4 (ENSGFOG00000004925) #21	JUP (ENSGFOG00000004851) #22	EIF1 (ENSGFOG00000004842) #25	ENSGFOG00000004830
Passeroidea	ANCESTRAL SPECIES	32	ENSGT00670000098179.s	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000157202.a #10	ENSGT00950000182812.A	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT01030000235196	ENSGT00390000015789.c #25	ENSGT00940000163247.u	ENSGT00940000165820.B	ENSGT00950000182969.B.c.a.a.c.f.b	ENSGT00940000165820.A.c.b	ENSGT00940000165820.A.c.a	ENSGT00950000182969.B.c.a.a.c.f.a.f	ENSGT00940000155258.t ##31	ENSGT00940000154403.b ##32	ENSGT00940000161077	ENSGT00940000161855	ENSGT00940000159382	ENSGT00940000159655
Common canary	MODERN SPECIES	42	KCNH4 (ENSSCAG00000006974)	RAB5C (ENSSCAG00000006986)	ENSSCAG00000006988	KAT2A (ENSSCAG00000007033) #8	ZNF385C (ENSSCAG00000007191) #10	NKIRAS2 (ENSSCAG00000007197) #12	DNAJC7 (ENSSCAG00000007248) #13	CNP (ENSSCAG00000007417) #14	ODAD4 (ENSSCAG00000007436) #15	ACLY (ENSSCAG00000007470) #16	KLHL11 (ENSSCAG00000007483) #17	KLHL10 (ENSSCAG00000007488) #18	NT5C3B (ENSSCAG00000007493) #19	FKBP10 (ENSSCAG00000007514) #20	P3H4 (ENSSCAG00000007526) #21	JUP (ENSSCAG00000007549) #22	ENSSCAG00000007584 #23	ENSSCAG00000007653	EIF1 (ENSSCAG00000007656) #25	ENSSCAG00000007660	ENSSCAG00000007664	ENSSCAG00000007670	ENSSCAG00000007673	ENSSCAG00000007681	ENSSCAG00000007686	ENSSCAG00000007692	ENSSCAG00000007701	KRT19 (ENSSCAG00000007706) ##31	KRT15 (ENSSCAG00000007710) ##32	KRT23 (ENSSCAG00000007713)	KRT20 (ENSSCAG00000007719)
Zebra finch	MODERN SPECIES	20	RAB5C (ENSTGUG00000002554)	KAT2A (ENSTGUG00000002531) #8	DHX58 (ENSTGUG00000002516) #9	ZNF385C (ENSTGUG00000002501) #10	ENSTGUG00000019302	NKIRAS2 (ENSTGUG00000018383) #12	DNAJC7 (ENSTGUG00000002483) #13	CNP (ENSTGUG00000002478) #14	ODAD4 (ENSTGUG00000002476) #15	ACLY (ENSTGUG00000002447) #16	KLHL11 (ENSTGUG00000027938) #17	KLHL10 (ENSTGUG00000013823) #18	NT5C3B (ENSTGUG00000013789) #19	FKBP10 (ENSTGUG00000002431) #20	P3H4 (ENSTGUG00000002427) #21	JUP (ENSTGUG00000002410) #22	ENSTGUG00000027542 #23	ENSTGUG00000027189	EIF1 (ENSTGUG00000026666) #25	ENSTGUG00000024454	KRT13 (ENSTGUG00000016947) #33	ENSTGUG00000002392	ENSTGUG00000002388	ENSTGUG00000019538	ENSTGUG00000016530	KRT19 (ENSTGUG00000002393) ##31	KRT23 (ENSTGUG00000018328)	KRT20 (ENSTGUG00000026084)	KRT12 (ENSTGUG00000002372)	KRT222 (ENSTGUG00000002371)	SMARCE1 (ENSTGUG00000002357)
Galloanserae	ANCESTRAL SPECIES	23	ENSGT00670000098179.r	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00950000182812.A	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT01030000235196	ENSGT00390000015789.c #25	ENSGT00940000163247.u	ENSGT00940000165820.B	ENSGT00950000183311 #33	ENSGT00950000182969.B.c.a.a.c.f.b	ENSGT00940000165820.A.c.b	ENSGT00940000165820.A.c.a	ENSGT00950000182969.B.c.a.a.c.f.a.c	ENSGT00940000155258.t ##31	ENSGT00940000154403.b ##32	ENSGT00940000161077	ENSGT00940000161855	ENSGT00940000159382
Anatidae	ANCESTRAL SPECIES	43	ENSGT00670000098179.r	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00950000182812.A	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT01030000235196	ENSGT00940000163247.t	ENSGT00940000165820.B	ENSGT00950000182969.B.c.a.a.c.f.b	ENSGT00940000165820.A.c.b	ENSGT00940000165820.A.c.a	ENSGT00940000154403.b ##32	ENSGT00940000161077	ENSGT00940000161855	ENSGT00940000159382	ENSGT00940000159655	ENSGT00390000003628.b	ENSGT01030000234667.a.a.a.a.b	ENSGT00940000160142
Pink-footed goose	MODERN SPECIES	200	ENSABRG00000009575	KAT2A (ENSABRG00000009561) #8	DHX58 (ENSABRG00000009544) #9	ENSABRG00000009539	ZNF385C (ENSABRG00000009526) #10	NKIRAS2 (ENSABRG00000009507) #12	DNAJC7 (ENSABRG00000009496) #13	CNP (ENSABRG00000009480) #14	ODAD4 (ENSABRG00000009465) #15	ACLY (ENSABRG00000009396) #16	KLHL11 (ENSABRG00000009354) #17	KLHL10 (ENSABRG00000009322) #18	NT5C3B (ENSABRG00000009275) #19	FKBP10 (ENSABRG00000009239) #20	P3H4 (ENSABRG00000009188) #21	JUP (ENSABRG00000009164) #22	ENSABRG00000008659 #23	ENSABRG00000008630	ENSABRG00000008514	ENSABRG00000008472	ENSABRG00000008452	ENSABRG00000008429	EIF1 (ENSABRG00000008424) #25	ENSABRG00000008408
Duck	MODERN SPECIES	702											ENSAPLG00000001436 #15	ENSAPLG00000020285 #16	NT5C3B (ENSAPLG00000015879) #19	FKBP10 (ENSAPLG00000015733) #20	P3H4 (ENSAPLG00000015731) #21	JUP (ENSAPLG00000014851) #22	ENSAPLG00000023688
Phasianidae	ANCESTRAL SPECIES	21	ENSGT00670000098179.r	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00950000182812.A	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00940000174634	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT01030000235196	ENSGT00390000015789.c #25	ENSGT00940000163247.u	ENSGT00940000165820.B	ENSGT00950000182969.B.c.a.a.c.f.b	ENSGT00940000165820.A.c.b	ENSGT00940000165820.A.c.a	ENSGT00950000182969.B.c.a.a.c.f.a.c	ENSGT00940000155258.t ##31	ENSGT00940000154403.b ##32	ENSGT00940000161077	ENSGT00940000161855	ENSGT00940000159382	ENSGT00940000159655
Japanese quail	MODERN SPECIES	19	ENSCJPG00005004858	KAT2A (ENSCJPG00005004853) #8	DHX58 (ENSCJPG00005004851) #9	ENSCJPG00005004849	ZNF385C (ENSCJPG00005004842) #10	NKIRAS2 (ENSCJPG00005004839) #12	DNAJC7 (ENSCJPG00005004798) #13	CNP (ENSCJPG00005004793) #14	ENSCJPG00005004787	ACLY (ENSCJPG00005004772) #16	KLHL11 (ENSCJPG00005004771) #17	KLHL10 (ENSCJPG00005004770) #18	NT5C3B (ENSCJPG00005004769) #19	FKBP10 (ENSCJPG00005004766) #20	P3H4 (ENSCJPG00005004763) #21	JUP (ENSCJPG00005004757) #22	ENSCJPG00005004756	ENSCJPG00005004601 #23	EIF1 (ENSCJPG00005004600) #25	ENSCJPG00005004598	KRT13 (ENSCJPG00005004597) #33	ENSCJPG00005004596	ENSCJPG00005004595	ENSCJPG00005004594	KRT19 (ENSCJPG00005004587) ##31	KRT15 (ENSCJPG00005004586) ##32	KRT23 (ENSCJPG00005004577)	KRT20 (ENSCJPG00005004576)	KRT12 (ENSCJPG00005004575)	KRT222 (ENSCJPG00005004574)	SMARCE1 (ENSCJPG00005004573)
Phasianidae_b	ANCESTRAL SPECIES	21	ENSGT00670000098179.s	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00950000182812.A	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00940000174634	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT01030000235196	ENSGT00390000015789.c #25	ENSGT00940000163247.u	ENSGT00940000165820.B	ENSGT00950000182969.B.c.a.a.c.f.b	ENSGT00940000165820.A.c.b	ENSGT00940000165820.A.c.a	ENSGT00950000182969.B.c.a.a.c.f.a.d	ENSGT00950000182969.B.c.a.a.c.f.a.c	ENSGT00940000155258.t ##31	ENSGT00940000154403.b ##32	ENSGT00940000161077	ENSGT00940000161855	ENSGT00940000159382
Turkey	MODERN SPECIES	21	KRT19 (ENSMGAG00000003084) ##31	KRT23 (ENSMGAG00000003057)	KRT20 (ENSMGAG00000016371)	KRT12 (ENSMGAG00000017405)	KRT222 (ENSMGAG00000002908)	ENSMGAG00000002913	ENSMGAG00000020999	ENSMGAG00000016744	ENSMGAG00000003113 ##32	ENSMGAG00000016911 ##27	ENSMGAG00000017065 ##27	ENSMGAG00000016949	ENSMGAG00000016477 #25	ENSMGAG00000016610 #23	ENSMGAG00000016750	ENSMGAG00000010064 #22	ENSMGAG00000022609 #21	ENSMGAG00000006992 #20	NT5C3B (ENSMGAG00000007006) #19	ENSMGAG00000003146 #17	ENSMGAG00000003122 #18	ACLY (ENSMGAG00000003163) #16	ODAD4 (ENSMGAG00000003248) #15	ENSMGAG00000003293 #13	CNP (ENSMGAG00000003273) #14	ENSMGAG00000017173 #10	NKIRAS2 (ENSMGAG00000003260) #12	ENSMGAG00000016964	DHX58 (ENSMGAG00000006752) #9	ENSMGAG00000006718 #8	ENSMGAG00000003373
Chicken	MODERN SPECIES	19	RAB5C (ENSGALG00010023265)	HSPB9 (ENSGALG00010023206)	KAT2A (ENSGALG00010023179) #8	DHX58 (ENSGALG00010023172) #9	ENSGALG00010022590	NKIRAS2 (ENSGALG00010023164) #12	DNAJC7 (ENSGALG00010023076) #13	CNP (ENSGALG00010023043) #14	ENSGALG00010022985	ACLY (ENSGALG00010022919) #16	KLHL11 (ENSGALG00010022866) #17	KLHL10 (ENSGALG00010022800) #18	NT5C3B (ENSGALG00010022747) #19	FKBP10 (ENSGALG00010022656) #20	P3H4 (ENSGALG00010022608) #21	JUP (ENSGALG00010021261) #22	ENSGALG00010021221 #23	ENSGALG00010021209	EIF1 (ENSGALG00010022682) #25	KRT17 (ENSGALG00010022946)	KRT14 (ENSGALG00010026690)	ENSGALG00010023183	ENSGALG00010026731	ENSGALG00010023089	ENSGALG00010026755	ENSGALG00010026719	ENSGALG00010022953	KRT24 (ENSGALG00010026706) ##31	KRT13 (ENSGALG00010022872) ##32	KRT23 (ENSGALG00010022817)	KRT40 (ENSGALG00010022786)
African ostrich	MODERN SPECIES	1063			RAB5C (ENSSCUG00000019171)	ENSSCUG00000013751	KAT2A (ENSSCUG00000013767) #8	DHX58 (ENSSCUG00000013803) #9	ENSSCUG00000013804	NKIRAS2 (ENSSCUG00000013806) #12	DNAJC7 (ENSSCUG00000013811) #13	CNP (ENSSCUG00000013817) #14	ODAD4 (ENSSCUG00000013820) #15	ACLY (ENSSCUG00000013827) #16	KLHL11 (ENSSCUG00000013838) #17	KLHL10 (ENSSCUG00000013839) #18	NT5C3B (ENSSCUG00000013841) #19	JUP (ENSSCUG00000013848) #22	KRT15 (ENSSCUG00000013863) ##32	ENSSCUG00000013869	ENSSCUG00000013874	ENSSCUG00000013880	ENSSCUG00000013882	ENSSCUG00000013888	KRT23 (ENSSCUG00000013894)	KRT20 (ENSSCUG00000013897)	KRT12 (ENSSCUG00000013904)	KRT222 (ENSSCUG00000013911)	SMARCE1 (ENSSCUG00000013919)	CCR7 (ENSSCUG00000013931)	TNS4 (ENSSCUG00000013935)
Australian saltwater crocodile	MODERN SPECIES	61	ENSCPRG00005005768	ENSCPRG00005005763	KAT2A (ENSCPRG00005005475) #8	DHX58 (ENSCPRG00005005375) #9	ZNF385C (ENSCPRG00005005349) #10	NKIRAS2 (ENSCPRG00005005343) #12	DNAJC7 (ENSCPRG00005005328) #13	CNP (ENSCPRG00005005320) #14	ODAD4 (ENSCPRG00005005310) #15	ACLY (ENSCPRG00005003731) #16	KLHL11 (ENSCPRG00005003587) #17	KLHL10 (ENSCPRG00005003584) #18	NT5C3B (ENSCPRG00005003578) #19	FKBP10 (ENSCPRG00005003571) #20	P3H4 (ENSCPRG00005003567) #21	JUP (ENSCPRG00005003553) #22	ENSCPRG00005003538 #23	ENSCPRG00005003535	EIF1 (ENSCPRG00005003501) #25	ENSCPRG00005003496	KRT19 (ENSCPRG00005003494) ##31	ENSCPRG00005003480	ENSCPRG00005003472	ENSCPRG00005003467 ##32	ENSCPRG00005003464 ##32	ENSCPRG00005003463	ENSCPRG00005003461	ENSCPRG00005003457	ENSCPRG00005003452	ENSCPRG00005003447 ##32	ENSCPRG00005003446 ##32
Lepidosauria	ANCESTRAL SPECIES	23	ENSGT00940000154971	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00950000182812.A	ENSGT00940000157202 #10	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00940000154664 #18	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT01030000235196	ENSGT00390000015789.c #25	ENSGT00940000155258.t ##31	ENSGT00940000163247	ENSGT00950000182969.B.c.a.a.c.f.b.j	ENSGT00950000183311 #33	ENSGT00940000165820.B	ENSGT00950000182969.B.c.a.a.c.f.b.i	ENSGT00940000165820.A	ENSGT00940000154403.b ##32	ENSGT00940000161311.d #34	ENSGT00940000161311.c #34	ENSGT00940000161077	ENSGT00940000161855
Episquamata	ANCESTRAL SPECIES	5	ENSGT00940000161077	ENSGT00940000161311.c #34	ENSGT00940000161311.d #34	ENSGT00940000154403.b ##32	ENSGT00940000165820.A.a	ENSGT00940000165820.A.b	ENSGT00950000182969.B.c.a.a.c.f.b.i	ENSGT00940000165820.B	ENSGT00950000183311 #33	ENSGT00950000182969.B.c.a.a.c.f.b.j	ENSGT00940000163247	ENSGT00940000155258.t ##31	ENSGT00390000015789.c #25	ENSGT01030000235196	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00940000162770.p.a.a	ENSGT00940000158410	ENSGT01100000263505.b.b.b.b	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00390000008726.h.b.f.b	ENSGT00940000154991.b	ENSGT00940000162770.p.a.b	ENSGT00940000154991.a.b	ENSGT00950000182881.a.a.b	ENSGT00950000182910.b	ENSGT01050000244905.B	ENSGT01080000257420.C.b.b.b
Toxicofera	ANCESTRAL SPECIES	4	ENSGT00940000161783.a	ENSGT00940000159382	ENSGT00950000182969.B.c.a.a.d	ENSGT00940000161077	ENSGT00940000154403.b ##32	ENSGT00940000165820.A.a	ENSGT00940000165820.A.b	ENSGT00950000182969.B.c.a.a.c.f.b.i	ENSGT00940000165820.B	ENSGT00950000183311 #33	ENSGT00950000182969.B.c.a.a.c.f.b.j	ENSGT00940000163247	ENSGT00390000015789.c #25	ENSGT01030000235196	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00940000162770.p.a.a	ENSGT00940000158410	ENSGT01100000263505.b.b.b.b	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00390000008726.h.b.f.b	ENSGT00940000154991.b	ENSGT00940000154991.a.b	ENSGT00950000182881.a.a.b	ENSGT00950000182910.b	ENSGT01050000244905.B	ENSGT01080000257420.C.b.b.b	ENSGT00940000164828
Elapidae	ANCESTRAL SPECIES	5	ENSGT00940000159382.e	ENSGT00940000160849.p.b	ENSGT00940000159382.f	ENSGT00950000182969.B.c.a.a.d	ENSGT00940000161077	ENSGT00940000154403.b ##32	ENSGT00950000183311 #33	ENSGT00950000182969.B.c.a.a.c.f.b.j	ENSGT00940000154403.a.b ##32	ENSGT00940000163247.p	ENSGT00950000182969.B.c.a.a.c.g	ENSGT00940000163247.q	ENSGT00390000015789.c #25	ENSGT01030000235196	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00940000162770.p.a.a	ENSGT00940000158410	ENSGT01100000263505.b.b.b.b	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00390000008726.h.b.f.b	ENSGT00940000154991.b	ENSGT00940000154991.a.b	ENSGT00950000182881.a.a.b	ENSGT00950000182910.b	ENSGT01050000244905.B	ENSGT01080000257420.C.b.b.b	ENSGT00940000164828
Elapidae_a	ANCESTRAL SPECIES	19								ENSGT00950000182969.B.c.a.a.c.f.b.i	ENSGT00950000182969.B.c.a.a.c.f.b.j	ENSGT00940000163247.p	ENSGT00950000182969.B.c.a.a.c.g	ENSGT00940000163247.q	ENSGT00390000015789.c #25	ENSGT01030000235196	ENSGT00940000153814.b.a #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00940000162770.p.a.a	ENSGT00940000158410	ENSGT01100000263505.b.b.b.b	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00390000008726.h.b.f.b	ENSGT00940000154991.b	ENSGT00940000154991.a.b	ENSGT00950000182881.a.a.b	ENSGT00950000182910.b	ENSGT01050000244905.B.f	ENSGT01050000244905.B.e	ENSGT01080000257420.C.b.b.b
Acanthophiinae	ANCESTRAL SPECIES	19								ENSGT00950000182969.B.c.a.a.c.f.b.i	ENSGT00950000182969.B.c.a.a.c.f.b.j	ENSGT00940000163247.p	ENSGT00950000182969.B.c.a.a.c.g	ENSGT00940000163247.q	ENSGT00390000015789.c #25	ENSGT01030000235196	ENSGT00940000153814.b.a #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000018397	ENSGT00940000162770.p.a.a	ENSGT00940000158410	ENSGT01100000263505.b.b.b.b	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00390000008726.h.b.f.b	ENSGT00940000154991.b	ENSGT00940000154991.a.b	ENSGT00950000182881.a.a.b	ENSGT00950000182910.b	ENSGT01050000244905.B.f	ENSGT01080000257420.C.b.b.b
Mainland tiger snake	MODERN SPECIES	29										ENSNSUG00000013514 ##32	ENSNSUG00000013200	ENSNSUG00000012774	EIF1 (ENSNSUG00000012764) #25	ENSNSUG00000012763	P3H4 (ENSNSUG00000012751) #21	JUP (ENSNSUG00000012750) #22	ENSNSUG00000012749 #23	ENSNSUG00000012748	ENSNSUG00000012747	CRHR1 (ENSNSUG00000012743)	ENSNSUG00000012741	SMARCD2 (ENSNSUG00000012582)	PSMC5 (ENSNSUG00000012042)	FTSJ3 (ENSNSUG00000011809)	ENSNSUG00000011807	ASIC2 (ENSNSUG00000011806)	ENSNSUG00000011803	ATP6V0A1 (ENSNSUG00000009586)	CAVIN1 (ENSNSUG00000009559)	STAT3 (ENSNSUG00000008728)	ENSNSUG00000008721
Eastern brown snake	MODERN SPECIES	139										ENSPTXG00000018027	ENSPTXG00000018029	ENSPTXG00000018030	ENSPTXG00000018240	EIF1 (ENSPTXG00000018305) #25	P3H4 (ENSPTXG00000018306) #21	JUP (ENSPTXG00000018308) #22	ENSPTXG00000018311 #23	RDM1 (ENSPTXG00000018313)	ENSPTXG00000018314	CRHR1 (ENSPTXG00000018316)	ENSPTXG00000018317	SMARCD2 (ENSPTXG00000018318)	PSMC5 (ENSPTXG00000018319)	FTSJ3 (ENSPTXG00000018321)	ENSPTXG00000011707	ASIC2 (ENSPTXG00000011708)
Blue-lipped sea krait	MODERN SPECIES	7371																JUP (ENSLLTG00000016939) #22
Indian cobra	MODERN SPECIES	337	ENSNNAG00000015547	ENSNNAG00000003221	KRT12 (ENSNNAG00000003388)	KRT10 (ENSNNAG00000003431)	ENSNNAG00000003608	KRT23 (ENSNNAG00000003719)	KRT15 (ENSNNAG00000003755) ##32	ENSNNAG00000003812 ##32	KRT13 (ENSNNAG00000003849) #33	ENSNNAG00000003935	ENSNNAG00000003954	ENSNNAG00000004052	EIF1 (ENSNNAG00000004838) #25	ENSNNAG00000004857	P3H4 (ENSNNAG00000004861) #21	JUP (ENSNNAG00000004885) #22	ENSNNAG00000004950 #23	CRHR1 (ENSNNAG00000005231)	ENSNNAG00000005306	SMARCD2 (ENSNNAG00000005345)	PSMC5 (ENSNNAG00000005372)	FTSJ3 (ENSNNAG00000005406)	ENSNNAG00000005455	ASIC2 (ENSNNAG00000005523)	ENSNNAG00000005714	ATP6V0A1 (ENSNNAG00000005793)	CAVIN1 (ENSNNAG00000006373)	STAT3 (ENSNNAG00000006383)	ENSNNAG00000006456	ENSNNAG00000006574	HCRT (ENSNNAG00000006594)
Lizard	MODERN SPECIES	5	KRT15 (ENSACAG00000028720) ##32	KRT36 (ENSACAG00000015803) #34	ENSACAG00000017868 ##32	ENSACAG00000029628	ENSACAG00000027366	ENSACAG00000017874	ENSACAG00000017876	ENSACAG00000035166	ENSACAG00000035898	ENSACAG00000026769	ENSACAG00000037211	KRT19 (ENSACAG00000028562) ##31	EIF1 (ENSACAG00000036849) #25	ENSACAG00000035521	P3H4 (ENSACAG00000017887) #21	ENSACAG00000017889 #22	ENSACAG00000041527	ENSACAG00000037441	ENSACAG00000017899 #23	ENSACAG00000017908	ENSACAG00000017907	ENSACAG00000044378	ENSACAG00000017912	ENSACAG00000017919	SMARCD2 (ENSACAG00000017920)	ENSACAG00000017921	FTSJ3 (ENSACAG00000017930)	ENSACAG00000017931	ENSACAG00000026083	ENSACAG00000017932	ENSACAG00000037224
Laterata	ANCESTRAL SPECIES	11	ENSGT00950000182969.B.c.a.a.d	ENSGT00940000161077	ENSGT00940000161311.c #34	ENSGT00940000161311.d #34	ENSGT00940000154403.b ##32	ENSGT00940000165820.A.a	ENSGT00940000165820.A.b	ENSGT00950000182969.B.c.a.a.c.f.b.i	ENSGT00940000165820.B	ENSGT00950000182969.B.c.a.a.c.f.b.j	ENSGT00940000163247	ENSGT00940000155258.t ##31	ENSGT00390000015789.c #25	ENSGT01030000235196	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00940000162770.p.a.a	ENSGT00940000158410	ENSGT01100000263505.b.b.b.b	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00390000008726.h.b.f.b	ENSGT00940000154991.b	ENSGT00940000162770.p.a.b	ENSGT00940000154991.a.b	ENSGT00950000182881.a.a.b	ENSGT00950000182910.b	ENSGT01050000244905.B	ENSGT01080000257420.C.b.b.b
Common wall lizard	MODERN SPECIES	4	KRT23 (ENSPMRG00000016687)	ENSPMRG00000016684 #34	ENSPMRG00000016555 #34	KRT15 (ENSPMRG00000016495) ##32	ENSPMRG00000016479	ENSPMRG00000016471	ENSPMRG00000016468	ENSPMRG00000016458	ENSPMRG00000016447	ENSPMRG00000016440	ENSPMRG00000016412	EIF1 (ENSPMRG00000016400) #25	ENSPMRG00000016387 ##31	ENSPMRG00000016378	P3H4 (ENSPMRG00000016362) #21	JUP (ENSPMRG00000016348) #22	ENSPMRG00000016329 #23	ENSPMRG00000016318	CRHR1 (ENSPMRG00000016303)	ENSPMRG00000016296	SMARCD2 (ENSPMRG00000016290)	PSMC5 (ENSPMRG00000016280)	ENSPMRG00000016276	ENSPMRG00000016266	ASIC2 (ENSPMRG00000016236)	ENSPMRG00000016224	ENSPMRG00000016215	ENSPMRG00000016211	ATP6V0A1 (ENSPMRG00000016187)	CAVIN1 (ENSPMRG00000016169)	STAT3 (ENSPMRG00000016161)
Argentine black and white tegu	MODERN SPECIES	32	ENSSMRG00000004380 #34	ENSSMRG00000003231 #34	KRT15 (ENSSMRG00000003225) ##32	ENSSMRG00000003224 ##32	ENSSMRG00000003133	ENSSMRG00000003125	ENSSMRG00000003116	ENSSMRG00000003114	KRT17 (ENSSMRG00000003112) ##27	ENSSMRG00000002871 ##32	ENSSMRG00000002850	ENSSMRG00000002819	EIF1 (ENSSMRG00000002817) #25	ENSSMRG00000002816	P3H4 (ENSSMRG00000002814) #21	JUP (ENSSMRG00000002811) #22	ENSSMRG00000002676 #23	ENSSMRG00000002674	ENSSMRG00000002673	CRHR1 (ENSSMRG00000002663)	ENSSMRG00000002629	SMARCD2 (ENSSMRG00000002625)	PSMC5 (ENSSMRG00000002618)	FTSJ3 (ENSSMRG00000002614)	ENSSMRG00000002598	ASIC2 (ENSSMRG00000002594)	ENSSMRG00000002570	ENSSMRG00000002556	ATP6V0A1 (ENSSMRG00000002546)	CAVIN1 (ENSSMRG00000002544)	STAT3 (ENSSMRG00000002528)
tuatara	MODERN SPECIES	1950	RAB5C (ENSSPUG00000012950)	KAT2A (ENSSPUG00000012964) #8	DHX58 (ENSSPUG00000012993) #9	ENSSPUG00000013120	ZNF385C (ENSSPUG00000013129) #10	NKIRAS2 (ENSSPUG00000013148) #12	DNAJC7 (ENSSPUG00000013180) #13	CNP (ENSSPUG00000013203) #14	ODAD4 (ENSSPUG00000013219) #15	ACLY (ENSSPUG00000013260) #16	KLHL11 (ENSSPUG00000013389) #17	KLHL10 (ENSSPUG00000013393) #18	NT5C3B (ENSSPUG00000013406) #19	FKBP10 (ENSSPUG00000013421) #20	P3H4 (ENSSPUG00000013436) #21	JUP (ENSSPUG00000013455) #22	ENSSPUG00000013483	EIF1 (ENSSPUG00000013490) #25	ENSSPUG00000013500 ##31	ENSSPUG00000013511	ENSSPUG00000013534 #29	ENSSPUG00000013544	ENSSPUG00000013576 ##32	KRT15 (ENSSPUG00000013597) ##32	ENSSPUG00000013612 #34	ENSSPUG00000013664 #34	KRT23 (ENSSPUG00000013704)	KRT20 (ENSSPUG00000013731)	KRT12 (ENSSPUG00000013794)	KRT10 (ENSSPUG00000013830)	ENSSPUG00000013886
Anura	ANCESTRAL SPECIES	15	ENSGT00940000154971	ENSGT00670000098179	ENSGT00940000158799 #8	ENSGT00940000153173.b.b #9	ENSGT00940000157202 #10	ENSGT00950000182812.A	ENSGT00940000157943.b #12	ENSGT00940000155338 #13	ENSGT00510000048410 #14	ENSGT00390000007911 #15	ENSGT00940000154881 #16	ENSGT00940000159275 #17	ENSGT00390000012959.a #19	ENSGT00940000156331 #20	ENSGT00940000153814.b #21	ENSGT00940000156395 #22	ENSGT00940000162183 #23	ENSGT00390000014792.a #24	ENSGT00390000015789.c #25	ENSGT00940000155258 #31	ENSGT00950000182969.B.c.a.a.c	ENSGT00950000183311.a #33	ENSGT00940000154403 #32	ENSGT00950000183311.b.a #33	ENSGT00950000183311.b.b #33	ENSGT00940000161311 #34	ENSGT00940000161077	ENSGT00950000182969.B.d	ENSGT00950000182969.B.c.a.a.d	ENSGT00940000159382.m.b.b	ENSGT00940000159382.m.b.a
Frog	MODERN SPECIES	1	rab5c (ENSXETG00000046256)	ENSXETG00000036857	kat2a (ENSXETG00000002303) #8	dhx58 (ENSXETG00000002302) #9	znf385c (ENSXETG00000023277)	znf385c (ENSXETG00000002298) #10	nkiras2 (ENSXETG00000002296) #12	dnajc7 (ENSXETG00000002295) #13	cnp (ENSXETG00000036371) #14	odad4 (ENSXETG00000002294) #15	acly (ENSXETG00000002292) #16	klhl11 (ENSXETG00000042941) #17	nt5c3b (ENSXETG00000002290) #19	fkbp10 (ENSXETG00000002288) #20	p3h4 (ENSXETG00000002284) #21	jup (ENSXETG00000006970) #22	hap1 (ENSXETG00000012489) #23	gast (ENSXETG00000012490) #24	terf2ip (ENSXETG00000012487)	eif1 (ENSXETG00000025051) #25	krt70 (ENSXETG00000012488) #31	krt19 (ENSXETG00000012482)	krt9.1 (ENSXETG00000038225)	krt9.2 (ENSXETG00000035234)	krt15.1 (ENSXETG00000029985) #33	krt15.2 (ENSXETG00000017467) #33	krt34 (ENSXETG00000036344) #34	krt23 (ENSXETG00000040013)	ENSXETG00000045090	krt12.1 (ENSXETG00000045813)	krt12.2 (ENSXETG00000021341)
Leishan spiny toad	MODERN SPECIES	3	ENSLLEG00000024414 #34	ENSLLEG00000024316 #34	ENSLLEG00000024257 #34	ENSLLEG00000024209 #33	ENSLLEG00000024134 #33	KRT15 (ENSLLEG00000023980) #32	ENSLLEG00000023893 #33	ENSLLEG00000023614	EIF1 (ENSLLEG00000023516) #25	ENSLLEG00000023489	ENSLLEG00000023380	ENSLLEG00000023302	NT5C3B (ENSLLEG00000023148) #19	FKBP10 (ENSLLEG00000023029) #20	P3H4 (ENSLLEG00000022959) #21	JUP (ENSLLEG00000021971) #22	ENSLLEG00000021649 #23	ENSLLEG00000021596 #24	ENSLLEG00000021561	ZNF281 (ENSLLEG00000021456)	TMEM98 (ENSLLEG00000021348)	ZNF652 (ENSLLEG00000021148)	PHB1 (ENSLLEG00000020990)	ENSLLEG00000020974	ENSLLEG00000020907	NGFR (ENSLLEG00000020843)	NXPH3 (ENSLLEG00000020801)	SPOP (ENSLLEG00000020342)	SLC35B1 (ENSLLEG00000020066)	KAT7 (ENSLLEG00000019312)	ENSLLEG00000019273