Sciuridae	ANCESTRAL SPECIES	5	ENSGT00390000018123.a.a #7	ENSGT00940000160934 #8	ENSGT00530000063759.a #9	ENSGT00440000033589.c #10	ENSGT00950000183170.a #11	ENSGT00940000159096 #12	ENSGT00940000158301 #13	ENSGT00960000190798	ENSGT00390000012529 #14	ENSGT00390000008576 #15	ENSGT00940000158492 #16	ENSGT00390000014556 #17	ENSGT00940000159811 #18	ENSGT00940000158682 #19	ENSGT00940000175746.a.a #21	ENSGT00940000154837.f #22	ENSGT00530000063553.b.b #23	ENSGT00940000162968 #24	ENSGT00940000159578 #25	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #33	ENSGT00940000160007 #34	ENSGT00390000007370 #35	ENSGT00390000007315 #36	ENSGT00940000163206.a #37	ENSGT00940000161310	ENSGT00390000001014.s
Marmotini	ANCESTRAL SPECIES	17	ENSGT00390000018123.a.a #7	ENSGT00940000160934 #8	ENSGT00530000063759.a #9	ENSGT00440000033589.c #10	ENSGT00950000183170.a #11	ENSGT00940000159096 #12	ENSGT00940000158301 #13	ENSGT00960000190798	ENSGT00390000012529 #14	ENSGT00390000008576 #15	ENSGT00940000158492 #16	ENSGT00390000014556 #17	ENSGT00940000159811 #18	ENSGT00940000158682 #19	ENSGT00940000175746.a.a.a #21	ENSGT00940000154837.f #22	ENSGT00530000063553.b.b #23	ENSGT00940000162968 #24	ENSGT00940000159578 #25	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #33	ENSGT00940000160007 #34	ENSGT00390000007370 #35	ENSGT00390000007315 #36	ENSGT00940000163206.a #37	ENSGT00940000161310
Alpin marmot	MODERN SPECIES	23	CYLD (ENSMMMG00000013093) #7	NOD2 (ENSMMMG00000013415) #8	SNX20 (ENSMMMG00000013445) #9	NKD1 (ENSMMMG00000013451) #10	BRD7 (ENSMMMG00000013473) #11	ADCY7 (ENSMMMG00000013505) #12	ENSMMMG00000014304 #13	HEATR3 (ENSMMMG00000014311) #14	CNEP1R1 (ENSMMMG00000014341) #15	ZNF423 (ENSMMMG00000014383) #16	ENSMMMG00000014403 #17	CBLN1 (ENSMMMG00000014438) #18	N4BP1 (ENSMMMG00000014453) #19	ENSMMMG00000014456 #20	ENSMMMG00000014468 #21	SIAH1 (ENSMMMG00000014478) #22	LONP2 (ENSMMMG00000014489) #23	ABCC11 (ENSMMMG00000014520) #24	ABCC12 (ENSMMMG00000014549) #25	ENSMMMG00000014636 #26	PHKB (ENSMMMG00000014653) #27	ITFG1 (ENSMMMG00000014700) #28	NETO2 (ENSMMMG00000015229) #29	ENSMMMG00000015252 #30	GPT2 (ENSMMMG00000015258) #31	ENSMMMG00000015275 #32	C16orf87 (ENSMMMG00000015312) #33	MYLK3 (ENSMMMG00000015317) #34	ORC6 (ENSMMMG00000015378) #35	VPS35 (ENSMMMG00000015395) #36	ENSMMMG00000015425 #37
Marmotini_b	ANCESTRAL SPECIES	7	ENSGT00390000018123.a.a #7	ENSGT00940000160934 #8	ENSGT00530000063759.a #9	ENSGT00440000033589.c #10	ENSGT00950000183170.a #11	ENSGT00940000159096 #12	ENSGT00940000158301 #13	ENSGT00960000190798	ENSGT00390000012529 #14	ENSGT00390000008576 #15	ENSGT00940000158492 #16	ENSGT00390000014556 #17	ENSGT00940000159811 #18	ENSGT00940000158682 #19	ENSGT00940000175746.a.a.a #21	ENSGT00940000154837.f #22	ENSGT00530000063553.b.b #23	ENSGT00940000162968 #24	ENSGT00940000159578 #25	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #33	ENSGT00940000160007 #34	ENSGT00390000007370 #35	ENSGT00390000007315 #36	ENSGT00940000163206.a #37	ENSGT00940000161310
Arctic ground squirrel	MODERN SPECIES	446										ZNF423 (ENSUPAG00010005254) #16	ENSUPAG00010005243 #17	CBLN1 (ENSUPAG00010005237) #18	ENSUPAG00010005232	N4BP1 (ENSUPAG00010005221) #19	ENSUPAG00010005216 #21	SIAH1 (ENSUPAG00010005210) #22	ENSUPAG00010005197 #23
Squirrel	MODERN SPECIES	75	TOX3 (ENSSTOG00000009587)	SALL1 (ENSSTOG00000020885)	CYLD (ENSSTOG00000010194) #7	NOD2 (ENSSTOG00000025139) #8	SNX20 (ENSSTOG00000031296) #9	NKD1 (ENSSTOG00000027729) #10	BRD7 (ENSSTOG00000024547) #11	ADCY7 (ENSSTOG00000001199) #12	ENSSTOG00000001196 #13	HEATR3 (ENSSTOG00000001183) #14	CNEP1R1 (ENSSTOG00000001179) #15	ZNF423 (ENSSTOG00000028569) #16	ENSSTOG00000005303 #17	CBLN1 (ENSSTOG00000027557) #18	N4BP1 (ENSSTOG00000006205) #19	SIAH1 (ENSSTOG00000008805) #22	LONP2 (ENSSTOG00000008780) #23	ABCC12 (ENSSTOG00000028133) #25	PHKB (ENSSTOG00000007705) #27	ITFG1 (ENSSTOG00000007671) #28	NETO2 (ENSSTOG00000004037) #29	ENSSTOG00000031645	DNAJA2 (ENSSTOG00000004007) #30	GPT2 (ENSSTOG00000014851) #31	C16orf87 (ENSSTOG00000027329) #33	MYLK3 (ENSSTOG00000003802) #34	ORC6 (ENSSTOG00000003785) #35	VPS35 (ENSSTOG00000003772) #36	ENSSTOG00000025341 #37
Eurasian red squirrel	MODERN SPECIES	8	NKD1 (ENSSVLG00005025829) #10	ENSSVLG00005025838 #11	ADCY7 (ENSSVLG00005025857) #12	TENT4B (ENSSVLG00005025875) #13	HEATR3 (ENSSVLG00005025878) #14	ENSSVLG00005025884 #15	ENSSVLG00005025890	ENSSVLG00005025893	ENSSVLG00005025899	ZNF423 (ENSSVLG00005016875) #16	ENSSVLG00005016966 #17	CBLN1 (ENSSVLG00005017023) #18	ENSSVLG00005017072	N4BP1 (ENSSVLG00005017117) #19	ENSSVLG00005017168 #21	SIAH1 (ENSSVLG00005017212) #22	LONP2 (ENSSVLG00005017285) #23	ABCC11 (ENSSVLG00005017407) #24	ABCC12 (ENSSVLG00005018066) #25	ENSSVLG00005018386 #27	ITFG1 (ENSSVLG00005018515) #28	NETO2 (ENSSVLG00005018574) #29	ENSSVLG00005018635	ENSSVLG00005018657 #30	GPT2 (ENSSVLG00005018752) #31	C16orf87 (ENSSVLG00005018828) #33	ENSSVLG00005018900	MYLK3 (ENSSVLG00005018924) #34	ENSSVLG00005019080 #35	VPS35 (ENSSVLG00005019175) #36	ENSSVLG00005019566 #37