Vertebrata ANCESTRAL SPECIES 171 ENSGT00490000043404 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 Gnathostomata ANCESTRAL SPECIES 7 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 ENSGT00390000001014 Euteleostomi ANCESTRAL SPECIES 30 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00990000203845 ENSGT00940000154688.b #31 ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 Sarcopterygii ANCESTRAL SPECIES 38 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00390000005105 #30 ENSGT00990000203845 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00940000160007 #34 ENSGT00390000009505 #33 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 Tetrapoda ANCESTRAL SPECIES 16 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00390000005105 #30 ENSGT00990000203845 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 Amniota ANCESTRAL SPECIES 25 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00990000203845 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 ENSGT00390000001014 Mammalia ANCESTRAL SPECIES 62 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00990000204193 ENSGT00390000005105 #30 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a Theria ANCESTRAL SPECIES 17 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00990000204193 ENSGT00390000005105 #30 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a Eutheria DUPLICATION Eutheria ANCESTRAL SPECIES 19 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00390000005105 #30 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 Boreoeutheria ANCESTRAL SPECIES 5 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00960000190798 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00390000005105 #30 ENSGT00940000154688.b #31 ENSGT00990000204193 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a Euarchontoglires ANCESTRAL SPECIES 5 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00960000190798 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00390000005105 #30 ENSGT00940000154688.b #31 ENSGT00990000204193 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a Primates ANCESTRAL SPECIES 21 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00390000005105 #30 ENSGT00940000154688.b #31 ENSGT00990000204193 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 Haplorrhini ANCESTRAL SPECIES 21 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00390000005105 #30 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 ENSGT00910000144311.G Simiiformes ANCESTRAL SPECIES 21 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576.g.a #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B.j #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00390000005105 #30 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 ENSGT00910000144311.G Catarrhini ANCESTRAL SPECIES 11 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576.g.a #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B.j #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00390000005105 #30 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315.d #36 ENSGT00940000161310 #37 ENSGT00940000155702.l Hominoidea ANCESTRAL SPECIES 9 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576.g.a #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00390000016567.f ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B.j #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00390000005105 #30 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315.d #36 ENSGT00940000161310 #37 ENSGT00940000155702.l Hominidae ANCESTRAL SPECIES 9 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576.g.a #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00390000016567.f ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B.j #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00390000005105 #30 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315.d #36 ENSGT00940000161310 #37 ENSGT00940000155702.l Orangutan MODERN SPECIES 7 ENSPPYG00000040133 #7 CYLD (ENSPPYG00000007344) #8 NOD2 (ENSPPYG00000007343) #9 SNX20 (ENSPPYG00000035536) #10 NKD1 (ENSPPYG00000007340) #11 BRD7 (ENSPPYG00000007339) #12 ADCY7 (ENSPPYG00000007338) #13 TENT4B (ENSPPYG00000007337) #14 HEATR3 (ENSPPYG00000007336) #15 CNEP1R1 (ENSPPYG00000007335) #16 ENSPPYG00000035778 #17 ZNF423 (ENSPPYG00000007334) #18 C16orf78 (ENSPPYG00000007333) #19 CBLN1 (ENSPPYG00000007331) #20 N4BP1 (ENSPPYG00000007330) #21 SIAH1 (ENSPPYG00000031045) #22 LONP2 (ENSPPYG00000007328) #23 ABCC11 (ENSPPYG00000007327) #24 ABCC12 (ENSPPYG00000007326) #25 ENSPPYG00000038100 #26 PHKB (ENSPPYG00000007325) #27 ITFG1 (ENSPPYG00000007324) #28 NETO2 (ENSPPYG00000007323) #29 ENSPPYG00000007322 #30 DNAJA2 (ENSPPYG00000007321) #31 GPT2 (ENSPPYG00000007320) #32 ENSPPYG00000007729 #33 MYLK3 (ENSPPYG00000007730) #34 ORC6 (ENSPPYG00000007731) #35 VPS35 (ENSPPYG00000007732) #36 SHCBP1 (ENSPPYG00000007733) #37 Homo/Pan/Gorilla group ANCESTRAL SPECIES 19 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576.g.a #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00390000016567.f ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B.j #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00390000005105 #30 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315.d #36 ENSGT00940000161310 #37 ENSGT00940000155702.l Gorilla MODERN SPECIES 7 SALL1 (ENSGGOG00000000663) CYLD (ENSGGOG00000008448) #8 NOD2 (ENSGGOG00000010795) #9 SNX20 (ENSGGOG00000042612) #10 NKD1 (ENSGGOG00000008141) #11 ENSGGOG00000014824 #12 ADCY7 (ENSGGOG00000014807) #13 TENT4B (ENSGGOG00000006316) #14 HEATR3 (ENSGGOG00000000878) #15 CNEP1R1 (ENSGGOG00000025211) #16 ZNF423 (ENSGGOG00000016641) #18 C16orf78 (ENSGGOG00000008081) #19 CBLN1 (ENSGGOG00000015205) #20 N4BP1 (ENSGGOG00000015565) #21 ENSGGOG00000026977 SIAH1 (ENSGGOG00000000938) #22 LONP2 (ENSGGOG00000006559) #23 ABCC11 (ENSGGOG00000005674) #24 ABCC12 (ENSGGOG00000004009) #25 ENSGGOG00000036580 ENSGGOG00000038408 PHKB (ENSGGOG00000003010) #27 ITFG1 (ENSGGOG00000003004) #28 NETO2 (ENSGGOG00000007529) #29 ENSGGOG00000025028 #30 DNAJA2 (ENSGGOG00000005200) #31 GPT2 (ENSGGOG00000016287) #32 C16orf87 (ENSGGOG00000041597) #33 MYLK3 (ENSGGOG00000011020) #34 ORC6 (ENSGGOG00000011804) #35 VPS35 (ENSGGOG00000008789) #36 Homo/Pan group ANCESTRAL SPECIES 19 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576.g.a #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00390000016567.f ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B.j #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00390000005105 #30 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315.d #36 ENSGT00940000161310 #37 ENSGT00940000155702.l Pan ANCESTRAL SPECIES 19 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576.g.a #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00390000016567.f ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00910000147721 ENSGT00390000008099.w.b.c.a #26 ENSGT00940000153336.e.a.a.a.b.a.a ENSGT00950000183118.B.j #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00390000005105 #30 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 Chimpanzee MODERN SPECIES 7 SALL1 (ENSPTRG00000008108) CYLD (ENSPTRG00000008107) #8 NOD2 (ENSPTRG00000008106) #9 SNX20 (ENSPTRG00000008105) #10 NKD1 (ENSPTRG00000008104) #11 BRD7 (ENSPTRG00000008103) #12 ADCY7 (ENSPTRG00000008102) #13 TENT4B (ENSPTRG00000008101) #14 HEATR3 (ENSPTRG00000008100) #15 CNEP1R1 (ENSPTRG00000041682) #16 ZNF423 (ENSPTRG00000008099) #18 C16H16orf78 (ENSPTRG00000008098) #19 CBLN1 (ENSPTRG00000008097) #20 N4BP1 (ENSPTRG00000008096) #21 ENSPTRG00000051824 SIAH1 (ENSPTRG00000008094) #22 LONP2 (ENSPTRG00000008093) #23 ABCC11 (ENSPTRG00000008092) #24 ABCC12 (ENSPTRG00000008091) #25 ENSPTRG00000051119 ENSPTRG00000050539 #26 ENSPTRG00000046984 PHKB (ENSPTRG00000008090) #27 ITFG1 (ENSPTRG00000008089) #28 NETO2 (ENSPTRG00000008087) #29 ENSPTRG00000047701 #30 DNAJA2 (ENSPTRG00000008085) #31 GPT2 (ENSPTRG00000008084) #32 C16H16orf87 (ENSPTRG00000008082) #33 MYLK3 (ENSPTRG00000008081) #34 ORC6 (ENSPTRG00000008080) #35 Bonobo MODERN SPECIES 7 SALL1 (ENSPPAG00000035657) CYLD (ENSPPAG00000027949) #8 NOD2 (ENSPPAG00000042973) #9 SNX20 (ENSPPAG00000031596) #10 ENSPPAG00000017627 #11 BRD7 (ENSPPAG00000038742) #12 ADCY7 (ENSPPAG00000026254) #13 TENT4B (ENSPPAG00000033650) #14 HEATR3 (ENSPPAG00000040469) #15 CNEP1R1 (ENSPPAG00000028006) #16 ZNF423 (ENSPPAG00000038999) #18 C16orf78 (ENSPPAG00000030795) #19 CBLN1 (ENSPPAG00000037058) #20 N4BP1 (ENSPPAG00000034858) #21 ENSPPAG00000030753 SIAH1 (ENSPPAG00000031633) #22 LONP2 (ENSPPAG00000033002) #23 ABCC11 (ENSPPAG00000043908) #24 ABCC12 (ENSPPAG00000028717) #25 ENSPPAG00000011862 ENSPPAG00000033278 #26 ENSPPAG00000030041 PHKB (ENSPPAG00000034914) #27 ITFG1 (ENSPPAG00000040718) #28 NETO2 (ENSPPAG00000032711) #29 ENSPPAG00000031174 #30 DNAJA2 (ENSPPAG00000012449) #31 GPT2 (ENSPPAG00000036585) #32 C16orf87 (ENSPPAG00000038293) #33 MYLK3 (ENSPPAG00000028365) #34 ORC6 (ENSPPAG00000038893) #35 Human MODERN SPECIES 7 HNRNPA1L3 (ENSG00000224578) SALL1 (ENSG00000103449) CYLD (ENSG00000083799) #8 NOD2 (ENSG00000167207) #9 SNX20 (ENSG00000167208) #10 NKD1 (ENSG00000140807) #11 BRD7 (ENSG00000166164) #12 ADCY7 (ENSG00000121281) #13 TENT4B (ENSG00000121274) #14 HEATR3 (ENSG00000155393) #15 CNEP1R1 (ENSG00000205423) #16 ZNF423 (ENSG00000102935) #18 C16orf78 (ENSG00000166152) #19 CBLN1 (ENSG00000102924) #20 N4BP1 (ENSG00000102921) #21 SIAH1 (ENSG00000196470) #22 LONP2 (ENSG00000102910) #23 ABCC11 (ENSG00000121270) #24 ABCC12 (ENSG00000140798) #25 PHKB (ENSG00000102893) #27 ITFG1 (ENSG00000129636) #28 NETO2 (ENSG00000171208) #29 DNAJA2 (ENSG00000069345) #31 GPT2 (ENSG00000166123) #32 C16orf87 (ENSG00000155330) #33 MYLK3 (ENSG00000140795) #34 ORC6 (ENSG00000091651) #35 VPS35 (ENSG00000069329) #36 SHCBP1 (ENSG00000171241) #37 ENSG00000284209 IGHV3OR16-17 (ENSG00000259680) Gibbon MODERN SPECIES 11 SALL1 (ENSNLEG00000001008) CYLD (ENSNLEG00000000923) #8 NOD2 (ENSNLEG00000000910) #9 SNX20 (ENSNLEG00000033286) #10 NKD1 (ENSNLEG00000029864) #11 BRD7 (ENSNLEG00000000834) #12 ADCY7 (ENSNLEG00000000816) #13 TENT4B (ENSNLEG00000000797) #14 HEATR3 (ENSNLEG00000000745) #15 CNEP1R1 (ENSNLEG00000034194) #16 ZNF423 (ENSNLEG00000000697) #18 C16orf78 (ENSNLEG00000027879) #19 CBLN1 (ENSNLEG00000000675) #20 N4BP1 (ENSNLEG00000000653) #21 ENSNLEG00000033251 SIAH1 (ENSNLEG00000035150) #22 LONP2 (ENSNLEG00000000605) #23 ABCC12 (ENSNLEG00000000497) #25 PHKB (ENSNLEG00000015813) #27 ENSNLEG00000027311 #26 ENSNLEG00000027255 ITFG1 (ENSNLEG00000015744) #28 NETO2 (ENSNLEG00000015738) #29 DNAJA2 (ENSNLEG00000015696) #31 ENSNLEG00000030783 #30 GPT2 (ENSNLEG00000015678) #32 C16orf87 (ENSNLEG00000015672) #33 ENSNLEG00000015670 #34 ENSNLEG00000013115 #35 VPS35 (ENSNLEG00000015584) #36 SHCBP1 (ENSNLEG00000028098) #37 Cercopithecidae ANCESTRAL SPECIES 8 ENSGT01020000230346.C.c.a.b.a ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576.g.a #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B.j #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00390000005105 #30 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315.d #36 ENSGT00940000161310 #37 ENSGT00940000155702.l Rhinopithecus ANCESTRAL SPECIES 334 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B.j #27 ENSGT00950000183118.B.i.b ##27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315.d #36 ENSGT00940000161310 #37 Golden snub-nosed monkey MODERN SPECIES 2968 N4BP1 (ENSRROG00000037371) #21 SIAH1 (ENSRROG00000035971) #22 LONP2 (ENSRROG00000026704) #23 ABCC11 (ENSRROG00000034803) #24 ABCC12 (ENSRROG00000033734) #25 ENSRROG00000012670 PHKB (ENSRROG00000033180) #27 ITFG1 (ENSRROG00000038711) #28 NETO2 (ENSRROG00000041130) #29 DNAJA2 (ENSRROG00000041281) #31 GPT2 (ENSRROG00000042469) #32 C16orf87 (ENSRROG00000027463) #33 MYLK3 (ENSRROG00000044699) #34 ORC6 (ENSRROG00000000515) #35 VPS35 (ENSRROG00000040561) #36 SHCBP1 (ENSRROG00000044250) #37 ENSRROG00000043934 Black snub-nosed monkey MODERN SPECIES 46 N4BP1 (ENSRBIG00000035001) #21 SIAH1 (ENSRBIG00000033450) #22 LONP2 (ENSRBIG00000032072) #23 ABCC11 (ENSRBIG00000034888) #24 ABCC12 (ENSRBIG00000041328) #25 ENSRBIG00000015956 ENSRBIG00000041668 ENSRBIG00000041631 ##27 Cercopithecinae ANCESTRAL SPECIES 10 ENSGT01020000230346.C.c.a.b.a ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576.g.a #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B.j #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00390000005105 #30 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315.d #36 ENSGT00940000161310 #37 ENSGT00940000155702.l Cercopithecinae_a ANCESTRAL SPECIES 10 ENSGT01020000230346.C.c.a.b.a ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576.g.a #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00910000147721 ENSGT00950000183118.B.j #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00390000005105 #30 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315.d #36 ENSGT00940000161310 #37 Macaca ANCESTRAL SPECIES 8 ENSGT01020000230346.C.c.a.b.a ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576.g.a #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00910000147721 ENSGT00950000183118.B.j #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00390000005105 #30 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315.d #36 ENSGT00940000161310 #37 Macaca_a ANCESTRAL SPECIES 14 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576.g.a #16 ENSGT00940000166898.a.a.b.b.a.a.a.b.b.a.a.b.b.a.a.b.a ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000167556.b.b.a.b.a.a.a.b.b.b.b.b.a.a.a.a.b.a.a.a.a.b.b ENSGT00940000161627.a.a.a.a.b.a.a.a.b.c.a.b.b.a.b.b ENSGT00940000159811 #20 ENSGT01100000263509.a.a.b.b.a.b.b.b.a.a.a.a.b.a.b.b.a.a.b ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B.j #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00390000007370 #35 ENSGT00390000007315.d #36 ENSGT00940000161310 #37 ENSGT00940000162459.c.b.b.b ENSGT00940000154453.b.a.a.b.a.c ENSGT00940000154453.b.a.a.b.b Rhesus MODERN SPECIES 12 HEATR3 (ENSMMUG00000020065) #15 ENSMMUG00000051827 CNEP1R1 (ENSMMUG00000008365) #16 ENSMMUG00000065197 ZNF423 (ENSMMUG00000021261) #18 C20H16orf78 (ENSMMUG00000019881) #19 ENSMMUG00000057032 ENSMMUG00000061908 ENSMMUG00000059883 CBLN1 (ENSMMUG00000022217) #20 ENSMMUG00000053141 ENSMMUG00000054426 ENSMMUG00000056885 ENSMMUG00000061708 N4BP1 (ENSMMUG00000018978) #21 SIAH1 (ENSMMUG00000007400) #22 LONP2 (ENSMMUG00000007397) #23 ABCC11 (ENSMMUG00000008290) #24 ABCC12 (ENSMMUG00000002201) #25 PHKB (ENSMMUG00000004718) #27 ITFG1 (ENSMMUG00000004717) #28 NETO2 (ENSMMUG00000028921) #29 DNAJA2 (ENSMMUG00000002247) #31 GPT2 (ENSMMUG00000003288) #32 C20H16orf87 (ENSMMUG00000049708) #33 ORC6 (ENSMMUG00000011942) #35 VPS35 (ENSMMUG00000011940) #36 SHCBP1 (ENSMMUG00000012376) #37 ENSMMUG00000012407 ENSMMUG00000059064 ENSMMUG00000058480 Crab-eating macaque MODERN SPECIES 12 ADCY7 (ENSMFAG00000037814) #13 ENSMFAG00000002315 #14 HEATR3 (ENSMFAG00000002184) #15 CNEP1R1 (ENSMFAG00000001901) #16 ENSMFAG00000054799 ZNF423 (ENSMFAG00000045032) #18 C16orf78 (ENSMFAG00000001439) #19 ENSMFAG00000053236 ENSMFAG00000056302 ENSMFAG00000059766 CBLN1 (ENSMFAG00000003677) #20 ENSMFAG00000060549 N4BP1 (ENSMFAG00000025909) #21 ENSMFAG00000054625 ENSMFAG00000048671 SIAH1 (ENSMFAG00000045157) #22 LONP2 (ENSMFAG00000029975) #23 ABCC11 (ENSMFAG00000030745) #24 ABCC12 (ENSMFAG00000039229) #25 ENSMFAG00000052045 ENSMFAG00000017159 PHKB (ENSMFAG00000043545) #27 ITFG1 (ENSMFAG00000038548) #28 NETO2 (ENSMFAG00000000612) #29 DNAJA2 (ENSMFAG00000003461) #31 ENSMFAG00000054512 GPT2 (ENSMFAG00000033087) #32 C16orf87 (ENSMFAG00000061258) #33 ORC6 (ENSMFAG00000005502) #35 VPS35 (ENSMFAG00000049538) #36 SHCBP1 (ENSMFAG00000036653) #37 Pig-tailed macaque MODERN SPECIES 188 ENSMNEG00000030103 SALL1 (ENSMNEG00000034770) CYLD (ENSMNEG00000030288) #8 NOD2 (ENSMNEG00000032525) #9 SNX20 (ENSMNEG00000000544) #10 NKD1 (ENSMNEG00000029629) #11 BRD7 (ENSMNEG00000041585) #12 ADCY7 (ENSMNEG00000028598) #13 TENT4B (ENSMNEG00000036382) #14 HEATR3 (ENSMNEG00000044688) #15 CNEP1R1 (ENSMNEG00000040247) #16 ZNF423 (ENSMNEG00000007103) #18 C16orf78 (ENSMNEG00000044619) #19 CBLN1 (ENSMNEG00000039224) #20 N4BP1 (ENSMNEG00000035504) #21 SIAH1 (ENSMNEG00000032985) #22 LONP2 (ENSMNEG00000033321) #23 ABCC11 (ENSMNEG00000041830) #24 ABCC12 (ENSMNEG00000041035) #25 ENSMNEG00000020189 PHKB (ENSMNEG00000040305) #27 ITFG1 (ENSMNEG00000010412) #28 NETO2 (ENSMNEG00000037070) #29 ENSMNEG00000030871 #30 DNAJA2 (ENSMNEG00000043155) #31 GPT2 (ENSMNEG00000036184) #32 C16orf87 (ENSMNEG00000039612) #33 MYLK3 (ENSMNEG00000037469) #34 ORC6 (ENSMNEG00000043380) #35 VPS35 (ENSMNEG00000038494) #36 ENSMNEG00000026922 Cercopithecinae_b ANCESTRAL SPECIES 5 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576.g.a #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00910000147721 ENSGT00950000183118.B.j #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00390000005105 #30 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315.d #36 ENSGT00940000161310 #37 Olive baboon MODERN SPECIES 9 NOD2 (ENSPANG00000019150) #9 SNX20 (ENSPANG00000000812) #10 NKD1 (ENSPANG00000009782) #11 BRD7 (ENSPANG00000024571) #12 ADCY7 (ENSPANG00000011498) #13 TENT4B (ENSPANG00000006934) #14 HEATR3 (ENSPANG00000024573) #15 CNEP1R1 (ENSPANG00000016962) #16 ZNF423 (ENSPANG00000022231) #18 ENSPANG00000038448 C16orf78 (ENSPANG00000022694) #19 CBLN1 (ENSPANG00000009450) #20 ENSPANG00000051011 N4BP1 (ENSPANG00000007118) #21 LONP2 (ENSPANG00000016834) #23 SIAH1 (ENSPANG00000021505) #22 ABCC11 (ENSPANG00000015025) #24 ABCC12 (ENSPANG00000024451) #25 PHKB (ENSPANG00000017340) #27 ITFG1 (ENSPANG00000001301) #28 ENSPANG00000040531 NETO2 (ENSPANG00000026489) #29 DNAJA2 (ENSPANG00000008681) #31 GPT2 (ENSPANG00000007620) #32 ENSPANG00000044573 C16orf87 (ENSPANG00000018045) #33 MYLK3 (ENSPANG00000017645) #34 ORC6 (ENSPANG00000000625) #35 VPS35 (ENSPANG00000015747) #36 SHCBP1 (ENSPANG00000019950) #37 ENSPANG00000050110 Cercopithecinae_d ANCESTRAL SPECIES 4 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576.g.a #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00390000006350.m.a.c.a.lb.b ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00910000147721 ENSGT00950000183118.B.j #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00390000005105 #30 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315.d #36 ENSGT00940000161310 #37 Drill MODERN SPECIES 1001 HEATR3 (ENSMLEG00000029177) #15 CNEP1R1 (ENSMLEG00000037462) #16 ZNF423 (ENSMLEG00000041391) #18 C16orf78 (ENSMLEG00000035013) #19 CBLN1 (ENSMLEG00000002999) #20 ENSMLEG00000037168 N4BP1 (ENSMLEG00000030992) #21 SIAH1 (ENSMLEG00000038118) #22 LONP2 (ENSMLEG00000034647) #23 ABCC11 (ENSMLEG00000033170) #24 ABCC12 (ENSMLEG00000029732) #25 ENSMLEG00000013619 ENSMLEG00000036067 ##27 ENSMLEG00000024919 Sooty mangabey MODERN SPECIES 96 CYLD (ENSCATG00000025694) #8 NOD2 (ENSCATG00000032818) #9 SNX20 (ENSCATG00000031155) #10 NKD1 (ENSCATG00000033443) #11 BRD7 (ENSCATG00000027818) #12 ENSCATG00000003671 ADCY7 (ENSCATG00000022081) #13 TENT4B (ENSCATG00000031641) #14 HEATR3 (ENSCATG00000021656) #15 CNEP1R1 (ENSCATG00000015240) #16 ZNF423 (ENSCATG00000034661) #18 C16orf78 (ENSCATG00000021615) #19 CBLN1 (ENSCATG00000042192) #20 ENSCATG00000028377 N4BP1 (ENSCATG00000036429) #21 SIAH1 (ENSCATG00000031876) #22 LONP2 (ENSCATG00000028734) #23 ABCC11 (ENSCATG00000036396) #24 ABCC12 (ENSCATG00000033549) #25 ENSCATG00000003133 PHKB (ENSCATG00000031431) #27 ITFG1 (ENSCATG00000032468) #28 ENSCATG00000031428 NETO2 (ENSCATG00000035156) #29 DNAJA2 (ENSCATG00000033759) #31 ENSCATG00000032159 #30 GPT2 (ENSCATG00000035440) #32 C16orf87 (ENSCATG00000031280) #33 MYLK3 (ENSCATG00000033172) #34 ORC6 (ENSCATG00000042186) #35 VPS35 (ENSCATG00000033979) #36 Vervet Monkey MODERN SPECIES 24 TOX3 (ENSCSAG00000005317) SALL1 (ENSCSAG00000005319) CYLD (ENSCSAG00000005324) #8 NOD2 (ENSCSAG00000005331) #9 SNX20 (ENSCSAG00000005339) #10 NKD1 (ENSCSAG00000005349) #11 BRD7 (ENSCSAG00000005361) #12 ADCY7 (ENSCSAG00000005371) #13 TENT4B (ENSCSAG00000005390) #14 HEATR3 (ENSCSAG00000005398) #15 CNEP1R1 (ENSCSAG00000005400) #16 ZNF423 (ENSCSAG00000005405) #18 C16orf78 (ENSCSAG00000005410) #19 CBLN1 (ENSCSAG00000005415) #20 N4BP1 (ENSCSAG00000005417) #21 SIAH1 (ENSCSAG00000005422) #22 ENSCSAG00000018862 LONP2 (ENSCSAG00000005425) #23 ABCC11 (ENSCSAG00000005454) #24 ABCC12 (ENSCSAG00000005497) #25 PHKB (ENSCSAG00000005516) #27 ITFG1 (ENSCSAG00000005522) #28 NETO2 (ENSCSAG00000005537) #29 ENSCSAG00000005547 #31 GPT2 (ENSCSAG00000005551) #32 C16orf87 (ENSCSAG00000005553) #33 MYLK3 (ENSCSAG00000005556) #34 ORC6 (ENSCSAG00000005565) #35 VPS35 (ENSCSAG00000005571) #36 SHCBP1 (ENSCSAG00000005573) #37 ENSCSAG00000005578 Platyrrhini ANCESTRAL SPECIES 21 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576.h ##16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000153336.e.a.a.a.b.a.a ENSGT00950000183118.B.j #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00390000005105 #30 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 Cebidae ANCESTRAL SPECIES 21 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934.a #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576.h ##16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000153336.e.a.a.a.b.a.a ENSGT00950000183118.B.j #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00390000005105 #30 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 Cebidae_a ANCESTRAL SPECIES 95 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934.a #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576.g.a #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000153336.e.a.a.a.b.a.a ENSGT00950000183118.B.j #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00390000005105 #30 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 Capuchin MODERN SPECIES 63 NOD2 (ENSCCAG00000034885) #9 ENSCCAG00000026084 SNX20 (ENSCCAG00000036877) #10 NKD1 (ENSCCAG00000033942) #11 ENSCCAG00000011713 BRD7 (ENSCCAG00000023437) #12 ADCY7 (ENSCCAG00000023487) #13 TENT4B (ENSCCAG00000035345) #14 HEATR3 (ENSCCAG00000031847) #15 ENSCCAG00000035613 ##16 ZNF423 (ENSCCAG00000009645) #18 C16orf78 (ENSCCAG00000036138) #19 CBLN1 (ENSCCAG00000023628) #20 N4BP1 (ENSCCAG00000013512) #21 ENSCCAG00000023246 SIAH1 (ENSCCAG00000026445) #22 LONP2 (ENSCCAG00000013470) #23 ABCC11 (ENSCCAG00000020774) #24 Bolivian squirrel monkey MODERN SPECIES 133 SALL1 (ENSSBOG00000032186) CYLD (ENSSBOG00000023333) #8 NOD2 (ENSSBOG00000024291) #9 ENSSBOG00000025917 SNX20 (ENSSBOG00000029064) #10 NKD1 (ENSSBOG00000033910) #11 ENSSBOG00000029661 #12 ADCY7 (ENSSBOG00000030162) #13 TENT4B (ENSSBOG00000020525) #14 HEATR3 (ENSSBOG00000026626) #15 CNEP1R1 (ENSSBOG00000000332) #16 ZNF423 (ENSSBOG00000029124) #18 C16orf78 (ENSSBOG00000024244) #19 CBLN1 (ENSSBOG00000028668) #20 N4BP1 (ENSSBOG00000019911) #21 SIAH1 (ENSSBOG00000027075) #22 LONP2 (ENSSBOG00000010480) #23 ABCC11 (ENSSBOG00000030679) #24 ENSSBOG00000032333 PHKB (ENSSBOG00000013796) #27 ITFG1 (ENSSBOG00000033400) #28 NETO2 (ENSSBOG00000029707) #29 ENSSBOG00000035157 #30 DNAJA2 (ENSSBOG00000026460) #31 GPT2 (ENSSBOG00000034808) #32 C16orf87 (ENSSBOG00000026255) #33 MYLK3 (ENSSBOG00000033739) #34 ORC6 (ENSSBOG00000018353) #35 VPS35 (ENSSBOG00000023629) #36 SHCBP1 (ENSSBOG00000032502) #37 Marmoset MODERN SPECIES 12 ENSCJAG00000078065 ENSCJAG00000075236 SNX20 (ENSCJAG00000001791) #10 NKD1 (ENSCJAG00000001801) #11 BRD7 (ENSCJAG00000001832) #12 ADCY7 (ENSCJAG00000001898) #13 TENT4B (ENSCJAG00000001932) #14 ENSCJAG00000075120 HEATR3 (ENSCJAG00000001972) #15 CNEP1R1 (ENSCJAG00000001997) ##16 ZNF423 (ENSCJAG00000011975) #18 C16orf78 (ENSCJAG00000012672) #19 CBLN1 (ENSCJAG00000012660) #20 ENSCJAG00000023015 N4BP1 (ENSCJAG00000012640) #21 SIAH1 (ENSCJAG00000053793) #22 ENSCJAG00000082008 LONP2 (ENSCJAG00000012577) #23 ABCC11 (ENSCJAG00000012514) #24 ENSCJAG00000084793 ENSCJAG00000073786 ENSCJAG00000079236 ENSCJAG00000069845 PHKB (ENSCJAG00000018324) #27 ENSCJAG00000084782 ITFG1 (ENSCJAG00000018388) #28 NETO2 (ENSCJAG00000007534) #29 DNAJA2 (ENSCJAG00000007552) #31 GPT2 (ENSCJAG00000007578) #32 C16orf87 (ENSCJAG00000083227) #33 ENSCJAG00000080350 Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 726 N4BP1 (ENSANAG00000023220) #21 ENSANAG00000016994 #22 ENSANAG00000027187 #23 Mas night monkey MODERN SPECIES 441 LRP2BP (ENSANAG00000006498) ANKRD37 (ENSANAG00000027379) UFSP2 (ENSANAG00000031393) C4orf47 (ENSANAG00000030249) CCDC110 (ENSANAG00000029580) PDLIM3 (ENSANAG00000030189) SORBS2 (ENSANAG00000031351) TLR3 (ENSANAG00000022917) FAM149A (ENSANAG00000025627) CYP4V2 (ENSANAG00000033858) KLKB1 (ENSANAG00000026589) F11 (ENSANAG00000021281) MTNR1A (ENSANAG00000031786) FAT1 (ENSANAG00000030288) ENSANAG00000024776 ENSANAG00000033461 #22 TRIML2 (ENSANAG00000021903) TRIML1 (ENSANAG00000022226) FRG1 (ENSANAG00000020876) ADH7 (ENSANAG00000032476) ENSANAG00000028664 Tarsier MODERN SPECIES 6082 N4BP1 (ENSTSYG00000025531) #21 SIAH1 (ENSTSYG00000028257) #22 LONP2 (ENSTSYG00000001400) #23 ABCC11 (ENSTSYG00000001398) #24 ABCC12 (ENSTSYG00000001389) #25 ENSTSYG00000027992 Strepsirrhini DUPLICATION Strepsirrhini ANCESTRAL SPECIES 17 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f.q #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00990000204193 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 Lemuriformes ANCESTRAL SPECIES 69 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f.q #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00990000204193 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 Lemuriformes_a ANCESTRAL SPECIES 151 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f.q #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 Greater bamboo lemur MODERN SPECIES 501 SIAH1 (ENSPSMG00000005887) #22 LONP2 (ENSPSMG00000005828) #23 ABCC11 (ENSPSMG00000005714) #24 ENSPSMG00000005656 #25 ENSPSMG00000005649 PHKB (ENSPSMG00000005626) #27 ITFG1 (ENSPSMG00000005505) #28 NETO2 (ENSPSMG00000005472) #29 ENSPSMG00000005468 #31 GPT2 (ENSPSMG00000005465) #32 Coquerels sifaka MODERN SPECIES 609 TMEM47 (ENSPCOG00000019390) ENSPCOG00000023082 #18 C16orf78 (ENSPCOG00000021897) #19 CBLN1 (ENSPCOG00000016497) #20 ENSPCOG00000014553 N4BP1 (ENSPCOG00000026157) #21 SIAH1 (ENSPCOG00000016801) #22 LONP2 (ENSPCOG00000027872) #23 ABCC11 (ENSPCOG00000012940) #24 ABCC12 (ENSPCOG00000021669) #25 Mouse lemur MODERN SPECIES 12 CDH5 (ENSMICG00000010353) CDH11 (ENSMICG00000012944) CDH8 (ENSMICG00000009649) ENSMICG00000038193 NKD1 (ENSMICG00000031027) #11 BRD7 (ENSMICG00000045004) #12 ADCY7 (ENSMICG00000011063) #13 TENT4B (ENSMICG00000027866) #14 ENSMICG00000031640 HEATR3 (ENSMICG00000012805) #15 CNEP1R1 (ENSMICG00000038531) #16 ZNF423 (ENSMICG00000005195) #18 C16orf78 (ENSMICG00000000865) #19 CBLN1 (ENSMICG00000032478) #20 N4BP1 (ENSMICG00000035077) #21 SIAH1 (ENSMICG00000042262) #22 LONP2 (ENSMICG00000014752) #23 ABCC11 (ENSMICG00000007811) #24 ABCC12 (ENSMICG00000007797) #25 ENSMICG00000026987 ENSMICG00000036396 PHKB (ENSMICG00000012314) #27 ITFG1 (ENSMICG00000012296) #28 NETO2 (ENSMICG00000029065) #29 DNAJA2 (ENSMICG00000017777) #31 ENSMICG00000043798 GPT2 (ENSMICG00000013187) #32 C16orf87 (ENSMICG00000005922) #33 MYLK3 (ENSMICG00000046381) #34 ORC6 (ENSMICG00000028393) #35 VPS35 (ENSMICG00000011393) #36 Bushbaby DUPLICATION Bushbaby DUPLICATION Bushbaby DUPLICATION Bushbaby DUPLICATION Bushbaby DUPLICATION Bushbaby DUPLICATION Bushbaby DUPLICATION Bushbaby MODERN SPECIES 171 ENSOGAG00000028006 SLITRK2 (ENSOGAG00000034490) ENSOGAG00000026949 #22 ENSOGAG00000031404 ENSOGAG00000030145 ENSOGAG00000031757 ENSOGAG00000033637 #22 ZDHHC14 (ENSOGAG00000028522) SNX9 (ENSOGAG00000000487) SYNJ2 (ENSOGAG00000000488) SERAC1 (ENSOGAG00000000490) GTF2H5 (ENSOGAG00000032151) TULP4 (ENSOGAG00000000492) TMEM181 (ENSOGAG00000000493) DYNLT1 (ENSOGAG00000000494) SYTL3 (ENSOGAG00000000495) ENSOGAG00000000499 RSPH3 (ENSOGAG00000033207) ENSOGAG00000010321 TAGAP (ENSOGAG00000012767) FNDC1 (ENSOGAG00000003812) SOD2 (ENSOGAG00000017100) Bushbaby MODERN SPECIES 232 MCF2 (ENSOGAG00000000864) ATP11C (ENSOGAG00000002088) ENSOGAG00000015306 ENSOGAG00000029856 ENSOGAG00000033659 ENSOGAG00000030168 ENSOGAG00000034439 ENSOGAG00000031982 ENSOGAG00000028331 ENSOGAG00000034324 SOX3 (ENSOGAG00000025781) ENSOGAG00000026459 #22 ENSOGAG00000029605 ENSOGAG00000034583 LDOC1 (ENSOGAG00000034696) ENSOGAG00000029867 #22 ENSOGAG00000029270 SLITRK4 (ENSOGAG00000007373) Bushbaby DUPLICATION Bushbaby DUPLICATION Bushbaby MODERN SPECIES 232 ENSOGAG00000028331 ENSOGAG00000031982 ENSOGAG00000034439 ENSOGAG00000030168 ENSOGAG00000033659 ENSOGAG00000029856 ENSOGAG00000015306 ATP11C (ENSOGAG00000002088) MCF2 (ENSOGAG00000000864) F9 (ENSOGAG00000000863) ENSOGAG00000028887 #22 ENSOGAG00000029354 ENSOGAG00000030480 FGF13 (ENSOGAG00000031744) ENSOGAG00000027112 ENSOGAG00000025744 #22 ZIC3 (ENSOGAG00000011700) GPR101 (ENSOGAG00000006478) ENSOGAG00000032990 Bushbaby MODERN SPECIES 101 ENSOGAG00000027143 #22 Bushbaby MODERN SPECIES 232 ENSOGAG00000034583 ENSOGAG00000029605 ENSOGAG00000026459 #22 SOX3 (ENSOGAG00000025781) ENSOGAG00000034324 ENSOGAG00000028331 ENSOGAG00000031982 ENSOGAG00000034439 ENSOGAG00000030168 ENSOGAG00000033659 ENSOGAG00000029856 ENSOGAG00000015306 ATP11C (ENSOGAG00000002088) MCF2 (ENSOGAG00000000864) F9 (ENSOGAG00000000863) ENSOGAG00000028887 #22 ENSOGAG00000029354 ENSOGAG00000030480 FGF13 (ENSOGAG00000031744) ENSOGAG00000027112 ENSOGAG00000025744 #22 ZIC3 (ENSOGAG00000011700) GPR101 (ENSOGAG00000006478) ENSOGAG00000032990 Bushbaby MODERN SPECIES 232 SLITRK4 (ENSOGAG00000007373) ENSOGAG00000029270 ENSOGAG00000029867 #22 LDOC1 (ENSOGAG00000034696) ENSOGAG00000034583 ENSOGAG00000029605 ENSOGAG00000026459 #22 SOX3 (ENSOGAG00000025781) ENSOGAG00000034324 ENSOGAG00000028331 ENSOGAG00000031982 ENSOGAG00000034439 ENSOGAG00000030168 ENSOGAG00000033659 ENSOGAG00000029856 ENSOGAG00000015306 ATP11C (ENSOGAG00000002088) MCF2 (ENSOGAG00000000864) F9 (ENSOGAG00000000863) ENSOGAG00000028887 #22 ENSOGAG00000029354 ENSOGAG00000030480 Bushbaby MODERN SPECIES 171 ENSOGAG00000028006 SLITRK2 (ENSOGAG00000034490) ENSOGAG00000026949 #22 ENSOGAG00000031404 ENSOGAG00000030145 ENSOGAG00000031757 ENSOGAG00000033637 #22 ZDHHC14 (ENSOGAG00000028522) SNX9 (ENSOGAG00000000487) SYNJ2 (ENSOGAG00000000488) SERAC1 (ENSOGAG00000000490) GTF2H5 (ENSOGAG00000032151) TULP4 (ENSOGAG00000000492) TMEM181 (ENSOGAG00000000493) DYNLT1 (ENSOGAG00000000494) SYTL3 (ENSOGAG00000000495) ENSOGAG00000000499 RSPH3 (ENSOGAG00000033207) Bushbaby MODERN SPECIES 272 ENSOGAG00000025161 NAP1L3 (ENSOGAG00000025630) ENSOGAG00000000324 ENSOGAG00000031690 ENSOGAG00000024995 ENSOGAG00000031095 ENSOGAG00000026741 DIAPH2 (ENSOGAG00000013639) ENSOGAG00000032949 #22 Bushbaby MODERN SPECIES 363 ENSOGAG00000005299 TCEAL4 (ENSOGAG00000030967) ENSOGAG00000034552 ENSOGAG00000027934 BEX3 (ENSOGAG00000014857) ENSOGAG00000014854 TCEAL7 (ENSOGAG00000028590) ENSOGAG00000014850 ENSOGAG00000025432 ENSOGAG00000027892 TCEAL8 (ENSOGAG00000015533) ENSOGAG00000025040 ENSOGAG00000002202 ENSOGAG00000002201 ENSOGAG00000024066 ENSOGAG00000031379 #22 Bushbaby MODERN SPECIES 423 ENSOGAG00000009382 #22 ENSOGAG00000025771 Strepsirrhini ANCESTRAL SPECIES ENSGT00940000154837.f.r #22 Bushbaby MODERN SPECIES 173 TOX3 (ENSOGAG00000009531) SALL1 (ENSOGAG00000027316) CYLD (ENSOGAG00000014666) #8 NOD2 (ENSOGAG00000014655) #9 SNX20 (ENSOGAG00000014652) #10 NKD1 (ENSOGAG00000024948) #11 BRD7 (ENSOGAG00000011289) #12 ADCY7 (ENSOGAG00000011284) #13 TENT4B (ENSOGAG00000011282) #14 HEATR3 (ENSOGAG00000011658) #15 CNEP1R1 (ENSOGAG00000015665) #16 ZNF423 (ENSOGAG00000029813) #18 C16orf78 (ENSOGAG00000012618) #19 CBLN1 (ENSOGAG00000026093) #20 N4BP1 (ENSOGAG00000012341) #21 ENSOGAG00000027052 #22 LONP2 (ENSOGAG00000000674) #23 ENSOGAG00000028743 ABCC11 (ENSOGAG00000006391) #24 ABCC12 (ENSOGAG00000006382) #25 ENSOGAG00000029001 ENSOGAG00000026086 PHKB (ENSOGAG00000014190) #27 ITFG1 (ENSOGAG00000014184) #28 NETO2 (ENSOGAG00000004721) #29 DNAJA2 (ENSOGAG00000013624) #31 GPT2 (ENSOGAG00000014309) #32 C16orf87 (ENSOGAG00000000186) #33 MYLK3 (ENSOGAG00000000398) #34 ORC6 (ENSOGAG00000000688) #35 VPS35 (ENSOGAG00000000396) #36 Euarchontoglires_A ANCESTRAL SPECIES 7 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00960000190798 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00990000204193 ENSGT00390000005105 #30 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a Glires ANCESTRAL SPECIES 6 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00960000190798 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00990000204193 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 Lagomorpha ANCESTRAL SPECIES 175 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 Rabbit MODERN SPECIES 465 CYLD (ENSOCUG00000012853) #8 NOD2 (ENSOCUG00000012840) #9 SNX20 (ENSOCUG00000005239) #10 NKD1 (ENSOCUG00000005228) #11 BRD7 (ENSOCUG00000003102) #12 ADCY7 (ENSOCUG00000003091) #13 TENT4B (ENSOCUG00000014750) #14 HEATR3 (ENSOCUG00000014184) #15 CNEP1R1 (ENSOCUG00000005923) #16 ZNF423 (ENSOCUG00000003685) #18 C16orf78 (ENSOCUG00000002911) #19 CBLN1 (ENSOCUG00000000990) #20 N4BP1 (ENSOCUG00000012740) #21 SIAH1 (ENSOCUG00000004814) #22 LONP2 (ENSOCUG00000007288) #23 ABCC11 (ENSOCUG00000002039) #24 ABCC12 (ENSOCUG00000002029) #25 Rodentia ANCESTRAL SPECIES 8 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00960000190798 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00990000204193 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 Rodentia_A ANCESTRAL SPECIES 6 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00960000190798 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 ENSGT00390000001014 Sciuridae ANCESTRAL SPECIES 5 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00960000190798 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000175746.a.a ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 ENSGT00390000001014.s Marmotini ANCESTRAL SPECIES 17 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00960000190798 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000175746.a.a.a ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 Marmotini_b ANCESTRAL SPECIES 7 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00960000190798 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000175746.a.a.a ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 Arctic ground squirrel MODERN SPECIES 446 ZNF423 (ENSUPAG00010005254) #18 ENSUPAG00010005243 #19 CBLN1 (ENSUPAG00010005237) #20 ENSUPAG00010005232 N4BP1 (ENSUPAG00010005221) #21 ENSUPAG00010005216 SIAH1 (ENSUPAG00010005210) #22 ENSUPAG00010005197 #23 Squirrel MODERN SPECIES 75 TOX3 (ENSSTOG00000009587) SALL1 (ENSSTOG00000020885) CYLD (ENSSTOG00000010194) #8 NOD2 (ENSSTOG00000025139) #9 SNX20 (ENSSTOG00000031296) #10 NKD1 (ENSSTOG00000027729) #11 BRD7 (ENSSTOG00000024547) #12 ADCY7 (ENSSTOG00000001199) #13 ENSSTOG00000001196 #14 HEATR3 (ENSSTOG00000001183) #15 CNEP1R1 (ENSSTOG00000001179) #16 ZNF423 (ENSSTOG00000028569) #18 ENSSTOG00000005303 #19 CBLN1 (ENSSTOG00000027557) #20 N4BP1 (ENSSTOG00000006205) #21 SIAH1 (ENSSTOG00000008805) #22 LONP2 (ENSSTOG00000008780) #23 ABCC12 (ENSSTOG00000028133) #25 PHKB (ENSSTOG00000007705) #27 ITFG1 (ENSSTOG00000007671) #28 NETO2 (ENSSTOG00000004037) #29 ENSSTOG00000031645 DNAJA2 (ENSSTOG00000004007) #31 GPT2 (ENSSTOG00000014851) #32 C16orf87 (ENSSTOG00000027329) #33 MYLK3 (ENSSTOG00000003802) #34 ORC6 (ENSSTOG00000003785) #35 VPS35 (ENSSTOG00000003772) #36 ENSSTOG00000025341 Alpin marmot MODERN SPECIES 23 CYLD (ENSMMMG00000013093) #8 NOD2 (ENSMMMG00000013415) #9 SNX20 (ENSMMMG00000013445) #10 NKD1 (ENSMMMG00000013451) #11 BRD7 (ENSMMMG00000013473) #12 ADCY7 (ENSMMMG00000013505) #13 ENSMMMG00000014304 #14 HEATR3 (ENSMMMG00000014311) #15 CNEP1R1 (ENSMMMG00000014341) #16 ZNF423 (ENSMMMG00000014383) #18 ENSMMMG00000014403 #19 CBLN1 (ENSMMMG00000014438) #20 N4BP1 (ENSMMMG00000014453) #21 ENSMMMG00000014456 ENSMMMG00000014468 SIAH1 (ENSMMMG00000014478) #22 LONP2 (ENSMMMG00000014489) #23 ABCC11 (ENSMMMG00000014520) #24 ABCC12 (ENSMMMG00000014549) #25 ENSMMMG00000014636 PHKB (ENSMMMG00000014653) #27 ITFG1 (ENSMMMG00000014700) #28 NETO2 (ENSMMMG00000015229) #29 ENSMMMG00000015252 #31 GPT2 (ENSMMMG00000015258) #32 ENSMMMG00000015275 C16orf87 (ENSMMMG00000015312) #33 MYLK3 (ENSMMMG00000015317) #34 ORC6 (ENSMMMG00000015378) #35 VPS35 (ENSMMMG00000015395) #36 ENSMMMG00000015425 Eurasian red squirrel MODERN SPECIES 8 NKD1 (ENSSVLG00005025829) #11 ENSSVLG00005025838 #12 ADCY7 (ENSSVLG00005025857) #13 TENT4B (ENSSVLG00005025875) #14 HEATR3 (ENSSVLG00005025878) #15 ENSSVLG00005025884 #16 ENSSVLG00005025890 ENSSVLG00005025893 ENSSVLG00005025899 ZNF423 (ENSSVLG00005016875) #18 ENSSVLG00005016966 #19 CBLN1 (ENSSVLG00005017023) #20 ENSSVLG00005017072 N4BP1 (ENSSVLG00005017117) #21 ENSSVLG00005017168 SIAH1 (ENSSVLG00005017212) #22 LONP2 (ENSSVLG00005017285) #23 ABCC11 (ENSSVLG00005017407) #24 ABCC12 (ENSSVLG00005018066) #25 ENSSVLG00005018386 #27 ITFG1 (ENSSVLG00005018515) #28 NETO2 (ENSSVLG00005018574) #29 ENSSVLG00005018635 ENSSVLG00005018657 #31 GPT2 (ENSSVLG00005018752) #32 C16orf87 (ENSSVLG00005018828) #33 ENSSVLG00005018900 MYLK3 (ENSSVLG00005018924) #34 ENSSVLG00005019080 #35 VPS35 (ENSSVLG00005019175) #36 ENSSVLG00005019566 Hystricomorpha ANCESTRAL SPECIES 72 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370.r #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 27 ENSHGLG00000033455 GK5 (ENSHGLG00000014374) XRN1 (ENSHGLG00000014476) ATR (ENSHGLG00000016875) TRPC1 (ENSHGLG00000017039) ENSHGLG00000048356 PCOLCE2 (ENSHGLG00000017054) PAQR9 (ENSHGLG00000017213) U2SURP (ENSHGLG00000017227) CHST2 (ENSHGLG00000041521) ENSHGLG00000018200 ENSHGLG00000011825 ENSHGLG00000044802 ENSHGLG00000019576 #21 ENSHGLG00000003222 SIAH1 (ENSHGLG00000003142) #22 ENSHGLG00000003081 #23 ENSHGLG00000048075 ENSHGLG00000003031 ENSHGLG00000039002 ENSHGLG00000047723 ENSHGLG00000048126 ENSHGLG00000012004 ENSHGLG00000032846 #35 PHKB (ENSHGLG00000002597) #27 ITFG1 (ENSHGLG00000002469) #28 NETO2 (ENSHGLG00000002342) #29 ENSHGLG00000002300 ENSHGLG00000002271 #30 ENSHGLG00000002235 #31 ENSHGLG00000050778 #32 Naked mole-rat female MODERN SPECIES ENSHGLG00000045321 ENSHGLG00000042358 ENSHGLG00000000746 ENSHGLG00000020121 ENSHGLG00000032106 ENSHGLG00000041333 ENSHGLG00000044343 ENSHGLG00000035030 ENSHGLG00000019642 ENSHGLG00000009764 ENSHGLG00000036657 ENSHGLG00000044549 ENSHGLG00000000510 ENSHGLG00000019985 ENSHGLG00000046356 ENSHGLG00000009234 #22 ENSHGLG00000043662 ENSHGLG00000041448 ENSHGLG00000040729 ENSHGLG00000046780 ENSHGLG00000036605 ENSHGLG00000045900 ENSHGLG00000048949 ENSHGLG00000020965 ENSHGLG00000039295 ENSHGLG00000043095 ENSHGLG00000050360 ENSHGLG00000045720 ENSHGLG00000037899 ENSHGLG00000048591 ENSHGLG00000043878 Hystricomorpha_a ANCESTRAL SPECIES 68 ENSGT00940000153692.A ENSGT00950000183015.D ENSGT00940000155680.d ENSGT00940000158223 ENSGT00940000160897 ENSGT01030000234574.B.c.a ENSGT00530000063424.b ENSGT00390000003791.p ENSGT00940000157350 ENSGT00390000004874.a.b ENSGT00940000153771.B ENSGT00940000157329 ENSGT00940000153510.b ENSGT00940000155881 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370.r #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 Guinea pig MODERN SPECIES 33 PTPN13 (ENSCPOG00000007122) MAPK10 (ENSCPOG00000013605) ARHGAP24 (ENSCPOG00000012796) WDFY3 (ENSCPOG00000006746) CDS1 (ENSCPOG00000030064) GPAT3 (ENSCPOG00000014802) ABRAXAS1 (ENSCPOG00000001374) MRPS18C (ENSCPOG00000009198) HELQ (ENSCPOG00000009180) HPSE (ENSCPOG00000001853) COQ2 (ENSCPOG00000035211) PLAC8 (ENSCPOG00000026026) COPS4 (ENSCPOG00000020170) LIN54 (ENSCPOG00000001139) N4BP1 (ENSCPOG00000022635) #21 SIAH1 (ENSCPOG00000020708) #22 LONP2 (ENSCPOG00000003859) #23 ABCC12 (ENSCPOG00000006873) #25 PHKB (ENSCPOG00000006408) #27 ITFG1 (ENSCPOG00000006398) #28 NETO2 (ENSCPOG00000011813) #29 ENSCPOG00000006955 #31 GPT2 (ENSCPOG00000013685) #32 C16orf87 (ENSCPOG00000010228) #33 MYLK3 (ENSCPOG00000003786) #34 ORC6 (ENSCPOG00000003779) #35 VPS35 (ENSCPOG00000003773) #36 SHCBP1 (ENSCPOG00000023425) #37 PTCHD3 (ENSCPOG00000026866) ENSCPOG00000032879 ENSCPOG00000035406 Hystricomorpha_b ANCESTRAL SPECIES 45 ENSGT00940000153692.A ENSGT00950000183015.D ENSGT00940000155680.d ENSGT00940000158223 ENSGT00940000160897 ENSGT01030000234574.B.c.a ENSGT00530000063424.b ENSGT00390000003791.p ENSGT00940000157350 ENSGT00390000004874.a.b ENSGT00940000153771.B ENSGT00940000157329 ENSGT00940000153510.b ENSGT00940000155881 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00910000144305 ENSGT00940000154674 ENSGT00940000161551 ENSGT00940000157819 ENSGT01050000244888.b.a.c.b ENSGT00940000160269 ENSGT00940000154200.B ENSGT00940000161728 Degu MODERN SPECIES 69 NKX6-1 (ENSODEG00000009272) ENSODEG00000007028 ENSODEG00000007416 ENSODEG00000019508 ENSODEG00000008639 ENSODEG00000008636 ABRAXAS1 (ENSODEG00000009343) ENSODEG00000007599 HELQ (ENSODEG00000008738) HPSE (ENSODEG00000007894) COQ2 (ENSODEG00000007764) PLAC8 (ENSODEG00000008537) ENSODEG00000008788 LIN54 (ENSODEG00000009071) N4BP1 (ENSODEG00000009642) #21 SIAH1 (ENSODEG00000010400) #22 ENSODEG00000007971 #23 ENSODEG00000009232 #23 ABCC12 (ENSODEG00000010786) #25 PHKB (ENSODEG00000008822) #27 ITFG1 (ENSODEG00000007883) #28 ENSODEG00000008342 NETO2 (ENSODEG00000008553) #29 ENSODEG00000007831 #31 GPT2 (ENSODEG00000008090) #32 HLTF (ENSODEG00000009415) ENSODEG00000009053 CPA3 (ENSODEG00000008292) CPB1 (ENSODEG00000011062) AGTR1 (ENSODEG00000019590) ENSODEG00000019589 Long-tailed chinchilla MODERN SPECIES 181 PTPN13 (ENSCLAG00000006187) MAPK10 (ENSCLAG00000007752) ARHGAP24 (ENSCLAG00000004468) WDFY3 (ENSCLAG00000004977) CDS1 (ENSCLAG00000006900) GPAT3 (ENSCLAG00000007713) ABRAXAS1 (ENSCLAG00000008039) ENSCLAG00000008205 HELQ (ENSCLAG00000004733) HPSE (ENSCLAG00000004879) ENSCLAG00000004962 PLAC8 (ENSCLAG00000005017) COPS4 (ENSCLAG00000005060) LIN54 (ENSCLAG00000006502) N4BP1 (ENSCLAG00000006600) #21 SIAH1 (ENSCLAG00000006639) #22 LONP2 (ENSCLAG00000006722) #23 ABCC12 (ENSCLAG00000006887) #25 PHKB (ENSCLAG00000007130) #27 ITFG1 (ENSCLAG00000007967) #28 NETO2 (ENSCLAG00000008739) #29 ENSCLAG00000002868 #31 GPT2 (ENSCLAG00000003182) #32 ENSCLAG00000003230 HLTF (ENSCLAG00000003408) GYG1 (ENSCLAG00000003920) CPA3 (ENSCLAG00000004064) CPB1 (ENSCLAG00000004152) AGTR1 (ENSCLAG00000004411) ZIC1 (ENSCLAG00000006845) ZIC4 (ENSCLAG00000007107) Rodentia_B ANCESTRAL SPECIES 21 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00990000204193 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 Kangaroo rat MODERN SPECIES 425 ENSDORG00000004249 Cyld (ENSDORG00000004192) #8 Nod2 (ENSDORG00000026607) #9 ENSDORG00000029324 #10 Nkd1 (ENSDORG00000008529) #11 Brd7 (ENSDORG00000010508) #12 Adcy7 (ENSDORG00000010503) #13 Tent4b (ENSDORG00000000031) #14 Heatr3 (ENSDORG00000004409) #15 ENSDORG00000026472 #16 Zfp423 (ENSDORG00000023772) #18 ENSDORG00000001017 #19 Cbln1 (ENSDORG00000025356) #20 ENSDORG00000024454 N4bp1 (ENSDORG00000002154) #21 ENSDORG00000025633 #22 Lonp2 (ENSDORG00000008240) #23 Abcc12 (ENSDORG00000008328) #25 Phkb (ENSDORG00000003977) #27 Myomorpha ANCESTRAL SPECIES 22 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00990000204193 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 114 Tox3 (ENSJJAG00000022737) ENSJJAG00000022677 Cyld (ENSJJAG00000013829) #8 Nod2 (ENSJJAG00000017441) #9 Snx20 (ENSJJAG00000022175) #10 Nkd1 (ENSJJAG00000016347) #11 Brd7 (ENSJJAG00000024144) #12 Adcy7 (ENSJJAG00000010449) #13 Tent4b (ENSJJAG00000015670) #14 Heatr3 (ENSJJAG00000016795) #15 Cnep1r1 (ENSJJAG00000016846) #16 Zfp423 (ENSJJAG00000019328) #18 4933402J07Rik (ENSJJAG00000013910) #19 Cbln1 (ENSJJAG00000021584) #20 N4bp1 (ENSJJAG00000017340) #21 ENSJJAG00000016189 #22 ENSJJAG00000022493 #23 ENSJJAG00000004386 #23 Abcc12 (ENSJJAG00000012348) #25 ENSJJAG00000018816 #27 Itfg1 (ENSJJAG00000015425) #28 Neto2 (ENSJJAG00000024020) #29 ENSJJAG00000000914 #31 Gpt2 (ENSJJAG00000017421) #32 4921524J17Rik (ENSJJAG00000021053) #33 Mylk3 (ENSJJAG00000004162) #34 ENSJJAG00000021576 #35 Vps35 (ENSJJAG00000013611) #36 Wfdc1 (ENSJJAG00000019944) Atp2c2 (ENSJJAG00000000433) Gas8 (ENSJJAG00000011248) Lesser Egyptian jerboa MODERN SPECIES 70 ENSJJAG00000016263 Fgf8 (ENSJJAG00000014440) Npm3 (ENSJJAG00000018907) Oga (ENSJJAG00000020565) Kcnip2 (ENSJJAG00000019358) Armh3 (ENSJJAG00000018861) Hps6 (ENSJJAG00000011662) Ldb1 (ENSJJAG00000012307) ENSJJAG00000024088 ENSJJAG00000005177 Nolc1 (ENSJJAG00000021131) Elovl3 (ENSJJAG00000020437) Pitx3 (ENSJJAG00000020721) ENSJJAG00000023637 ENSJJAG00000010788 ENSJJAG00000018772 #22 Nfkb2 (ENSJJAG00000011519) Psd (ENSJJAG00000020932) Fbxl15 (ENSJJAG00000018833) Cuedc2 (ENSJJAG00000019898) Mfsd13a (ENSJJAG00000019354) Actr1a (ENSJJAG00000012214) Sufu (ENSJJAG00000004811) Trim8 (ENSJJAG00000022961) Arl3 (ENSJJAG00000001249) Sfxn2 (ENSJJAG00000020334) Wbp1l (ENSJJAG00000005618) Cyp17a1 (ENSJJAG00000020313) ENSJJAG00000007546 Borcs7 (ENSJJAG00000019848) As3mt (ENSJJAG00000017269) Muroidea ANCESTRAL SPECIES 19 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00990000204193 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 1802 4933402J07Rik (ENSNGAG00000012355) #19 Cbln1 (ENSNGAG00000012727) #20 N4bp1 (ENSNGAG00000013195) #21 ENSNGAG00000013502 #22 Lonp2 (ENSNGAG00000014764) #23 ENSNGAG00000015300 Abcc12 (ENSNGAG00000016447) #25 ENSNGAG00000002305 Upper Galilee mountains blind mole rat MODERN SPECIES 1781 Bhlhb9 (ENSNGAG00000013197) Gprasp2 (ENSNGAG00000013470) Gprasp1 (ENSNGAG00000013442) Armcx5 (ENSNGAG00000013176) Tcp11x2 (ENSNGAG00000012701) ENSNGAG00000001001 ENSNGAG00000014763 ENSNGAG00000019000 #22 ENSNGAG00000014778 Muroidea_A DUPLICATION Muroidea_A DUPLICATION Muroidea_A ANCESTRAL SPECIES 16 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f.y.a #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000164424 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT01030000234638.b.a.a ENSGT00390000002121 Cricetidae ANCESTRAL SPECIES 7 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f.y.a #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000164424 ENSGT01030000234638.b.a.a ENSGT00390000002121 ENSGT00940000159016 Cricetinae ANCESTRAL SPECIES 16 ENSGT00940000158043 ENSGT00940000155938.s ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f.y.a #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 Chinese hamster chok1gshd MODERN SPECIES 112 ENSCGRG00001023314 ENSCGRG00001019423 Cyld (ENSCGRG00001000533) #8 Nod2 (ENSCGRG00001011531) #9 Snx20 (ENSCGRG00001020312) #10 Nkd1 (ENSCGRG00001011787) #11 Brd7 (ENSCGRG00001003449) #12 Adcy7 (ENSCGRG00001014504) #13 Tent4b (ENSCGRG00001023597) #14 Heatr3 (ENSCGRG00001024755) #15 Cnep1r1 (ENSCGRG00001009199) #16 Zfp423 (ENSCGRG00001023063) #18 4933402J07Rik (ENSCGRG00001021069) #19 Cbln1 (ENSCGRG00001018308) #20 N4bp1 (ENSCGRG00001014095) #21 Siah1b (ENSCGRG00001006463) #22 LONP2 (ENSCGRG00001009685) #23 Abcc12 (ENSCGRG00001017268) #25 Phkb (ENSCGRG00001003257) #27 Itfg1 (ENSCGRG00001016387) #28 Neto2 (ENSCGRG00001019397) #29 Dnaja2 (ENSCGRG00001019174) #31 Gpt2 (ENSCGRG00001022110) #32 4921524J17Rik (ENSCGRG00001019894) #33 Mylk3 (ENSCGRG00001016524) #34 Orc6 (ENSCGRG00001000545) #35 Vps35 (ENSCGRG00001010516) #36 Cricetidae_B ANCESTRAL SPECIES 5 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f.y.a #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000164424 ENSGT01030000234638.b.a.a ENSGT00390000002121 ENSGT00940000159016 Northern American deer mouse MODERN SPECIES 18 Sall1 (ENSPEMG00000012331) Cyld (ENSPEMG00000011322) #8 Nod2 (ENSPEMG00000016933) #9 Snx20 (ENSPEMG00000015231) #10 Nkd1 (ENSPEMG00000028031) #11 Brd7 (ENSPEMG00000015843) #12 Adcy7 (ENSPEMG00000018675) #13 Tent4b (ENSPEMG00000029372) #14 Heatr3 (ENSPEMG00000016174) #15 Cnep1r1 (ENSPEMG00000017702) #16 ENSPEMG00000002704 Zfp423 (ENSPEMG00000015523) #18 4933402J07Rik (ENSPEMG00000016843) #19 Cbln1 (ENSPEMG00000029511) #20 N4bp1 (ENSPEMG00000016429) #21 Siah1b (ENSPEMG00000008065) #22 Lonp2 (ENSPEMG00000010377) #23 Abcc12 (ENSPEMG00000015588) #25 Phkb (ENSPEMG00000004503) #27 Itfg1 (ENSPEMG00000013284) #28 Neto2 (ENSPEMG00000014306) #29 Dnaja2 (ENSPEMG00000016348) #31 Gpt2 (ENSPEMG00000008151) #32 4921524J17Rik (ENSPEMG00000025838) #33 Mylk3 (ENSPEMG00000000415) #34 ENSPEMG00000021580 Orc6 (ENSPEMG00000000721) #35 Vps35 (ENSPEMG00000011942) #36 Or7c19 (ENSPEMG00000024814) ENSPEMG00000025354 ENSPEMG00000026081 Prairie vole MODERN SPECIES 98 ENSMOCG00000009848 Nod2 (ENSMOCG00000021721) #9 Snx20 (ENSMOCG00000015078) #10 Nkd1 (ENSMOCG00000019054) #11 Brd7 (ENSMOCG00000022495) #12 Adcy7 (ENSMOCG00000000434) #13 ENSMOCG00000016736 Tent4b (ENSMOCG00000013042) #14 Heatr3 (ENSMOCG00000019132) #15 ENSMOCG00000019184 #16 Zfp423 (ENSMOCG00000002689) #18 4933402J07Rik (ENSMOCG00000020575) #19 Cbln1 (ENSMOCG00000003934) #20 ENSMOCG00000017947 N4bp1 (ENSMOCG00000016652) #21 Siah1b (ENSMOCG00000004613) #22 Lonp2 (ENSMOCG00000003841) #23 Abcc12 (ENSMOCG00000001840) #25 Phkb (ENSMOCG00000021928) #27 Itfg1 (ENSMOCG00000012550) #28 Neto2 (ENSMOCG00000000575) #29 ENSMOCG00000006972 #31 Gpt2 (ENSMOCG00000016944) #32 4921524J17Rik (ENSMOCG00000022491) #33 Mylk3 (ENSMOCG00000008937) #34 Orc6 (ENSMOCG00000020756) #35 Vps35 (ENSMOCG00000002997) #36 ENSMOCG00000006321 Man2b1 (ENSMOCG00000019337) Wdr83os (ENSMOCG00000000084) Wdr83 (ENSMOCG00000015572) Murinae ANCESTRAL SPECIES ENSGT00940000154837.f.y.a #22 Mus ANCESTRAL SPECIES 9 ENSGT00510000047168 ENSGT00390000001798 ENSGT00390000006915.c.c.b ENSGT00390000013608 ENSGT00940000158730 ENSGT00390000009885 ENSGT00390000016713 ENSGT00940000157160 ENSGT00940000160592 ENSGT00390000014405 ENSGT00940000159726 ENSGT00390000008044 ENSGT00940000161172 ENSGT00940000158077 ENSGT00940000160862 ENSGT00940000154837.f.y.a #22 ENSGT00940000156978 ENSGT00940000166817 ENSGT00970000193372.a.a ENSGT00950000182909.b.a.a.e ENSGT01100000263512.b.b.a ENSGT00910000144179.b.a ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 ENSGT00950000182963.b.a ENSGT00940000154164.d ENSGT00940000163807 ENSGT00940000159407 Mus_A ANCESTRAL SPECIES 8 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f.y.b #22 ENSGT00860000136300 ENSGT00940000154837.f.y.a #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000164424 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT01030000234638.b.a.a ENSGT00390000002121.i Ryukyu mouse DUPLICATION Ryukyu mouse MODERN SPECIES 17 Cyld (MGP_CAROLIEiJ_G0031361) #8 Nod2 (MGP_CAROLIEiJ_G0031360) #9 Snx20 (MGP_CAROLIEiJ_G0031359) #10 Nkd1 (MGP_CAROLIEiJ_G0031358) #11 Brd7 (MGP_CAROLIEiJ_G0031357) #12 Adcy7 (MGP_CAROLIEiJ_G0031356) #13 Tent4b (MGP_CAROLIEiJ_G0031355) #14 Heatr3 (MGP_CAROLIEiJ_G0031354) #15 Cnep1r1 (MGP_CAROLIEiJ_G0031353) #16 Zfp423 (MGP_CAROLIEiJ_G0031352) #18 4933402J07Rik (MGP_CAROLIEiJ_G0031351) #19 Cbln1 (MGP_CAROLIEiJ_G0031350) #20 N4bp1 (MGP_CAROLIEiJ_G0031349) #21 MGP_CAROLIEiJ_G0031348 MGP_CAROLIEiJ_G0031347 #22 MGP_CAROLIEiJ_G0031346 #22 Lonp2 (MGP_CAROLIEiJ_G0031345) #23 Abcc12 (MGP_CAROLIEiJ_G0031344) #25 Phkb (MGP_CAROLIEiJ_G0031343) #27 Itfg1 (MGP_CAROLIEiJ_G0031342) #28 Neto2 (MGP_CAROLIEiJ_G0031341) #29 Dnaja2 (MGP_CAROLIEiJ_G0031340) #31 Gpt2 (MGP_CAROLIEiJ_G0031339) #32 4921524J17Rik (MGP_CAROLIEiJ_G0031338) #33 Mylk3 (MGP_CAROLIEiJ_G0031337) #34 Orc6 (MGP_CAROLIEiJ_G0031336) #35 Vps35 (MGP_CAROLIEiJ_G0031335) #36 Or7c19 (MGP_CAROLIEiJ_G0031334) Zfp791 (MGP_CAROLIEiJ_G0031333) Man2b1 (MGP_CAROLIEiJ_G0031332) Wdr83os (MGP_CAROLIEiJ_G0031331) Ryukyu mouse MODERN SPECIES 17 Sall1 (MGP_CAROLIEiJ_G0031362) Cyld (MGP_CAROLIEiJ_G0031361) #8 Nod2 (MGP_CAROLIEiJ_G0031360) #9 Snx20 (MGP_CAROLIEiJ_G0031359) #10 Nkd1 (MGP_CAROLIEiJ_G0031358) #11 Brd7 (MGP_CAROLIEiJ_G0031357) #12 Adcy7 (MGP_CAROLIEiJ_G0031356) #13 Tent4b (MGP_CAROLIEiJ_G0031355) #14 Heatr3 (MGP_CAROLIEiJ_G0031354) #15 Cnep1r1 (MGP_CAROLIEiJ_G0031353) #16 Zfp423 (MGP_CAROLIEiJ_G0031352) #18 4933402J07Rik (MGP_CAROLIEiJ_G0031351) #19 Cbln1 (MGP_CAROLIEiJ_G0031350) #20 N4bp1 (MGP_CAROLIEiJ_G0031349) #21 MGP_CAROLIEiJ_G0031348 MGP_CAROLIEiJ_G0031347 #22 MGP_CAROLIEiJ_G0031346 #22 Lonp2 (MGP_CAROLIEiJ_G0031345) #23 Abcc12 (MGP_CAROLIEiJ_G0031344) #25 Phkb (MGP_CAROLIEiJ_G0031343) #27 Itfg1 (MGP_CAROLIEiJ_G0031342) #28 Neto2 (MGP_CAROLIEiJ_G0031341) #29 Dnaja2 (MGP_CAROLIEiJ_G0031340) #31 Gpt2 (MGP_CAROLIEiJ_G0031339) #32 4921524J17Rik (MGP_CAROLIEiJ_G0031338) #33 Mylk3 (MGP_CAROLIEiJ_G0031337) #34 Orc6 (MGP_CAROLIEiJ_G0031336) #35 Vps35 (MGP_CAROLIEiJ_G0031335) #36 Or7c19 (MGP_CAROLIEiJ_G0031334) Zfp791 (MGP_CAROLIEiJ_G0031333) Man2b1 (MGP_CAROLIEiJ_G0031332) Mus_B ANCESTRAL SPECIES 6 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f.y.b #22 ENSGT00860000136300 ENSGT00940000154837.f.y.a #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000164424 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT01030000234638.b.a.a ENSGT00390000002121.i Mouse MODERN SPECIES 37 Trappc2 (ENSMUSG00000079317) Ofd1 (ENSMUSG00000040586) Gpm6b (ENSMUSG00000031342) Gemin8 (ENSMUSG00000040621) Glra2 (ENSMUSG00000018589) Fancb (ENSMUSG00000047757) Mospd2 (ENSMUSG00000061778) Asb9 (ENSMUSG00000031384) Asb11 (ENSMUSG00000031382) Piga (ENSMUSG00000031381) Vegfd (ENSMUSG00000031380) Pir (ENSMUSG00000031379) Bmx (ENSMUSG00000031377) Ace2 (ENSMUSG00000015405) Cltrn (ENSMUSG00000015401) Siah1b (ENSMUSG00000040749) #22 Car5b (ENSMUSG00000031373) Zrsr2 (ENSMUSG00000031370) Ap1s2 (ENSMUSG00000031367) Rnf138rt1 (ENSMUSG00000083695) Grpr (ENSMUSG00000031364) S100g (ENSMUSG00000040808) Ctps2 (ENSMUSG00000031360) Syap1 (ENSMUSG00000031357) Txlng (ENSMUSG00000038344) Rbbp7 (ENSMUSG00000031353) Reps2 (ENSMUSG00000040855) Nhs (ENSMUSG00000059493) Rai2 (ENSMUSG00000043518) Bend2 (ENSMUSG00000108981) Scml2 (ENSMUSG00000000037) Mus_C ANCESTRAL SPECIES 5 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f.y.b #22 ENSGT00860000136300 ENSGT00940000154837.f.y.a #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000164424 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT01030000234638.b.a.a ENSGT00390000002121.i Steppe mouse MODERN SPECIES 914 Siah1b (ENSMSIG00000007705) #22 spretus MODERN SPECIES 17 Sall1 (MGP_SPRETEiJ_G0032480) Cyld (MGP_SPRETEiJ_G0032479) #8 Nod2 (MGP_SPRETEiJ_G0032478) #9 Snx20 (MGP_SPRETEiJ_G0032477) #10 Nkd1 (MGP_SPRETEiJ_G0032476) #11 Brd7 (MGP_SPRETEiJ_G0032475) #12 Adcy7 (MGP_SPRETEiJ_G0032474) #13 Tent4b (MGP_SPRETEiJ_G0032473) #14 Heatr3 (MGP_SPRETEiJ_G0032472) #15 Cnep1r1 (MGP_SPRETEiJ_G0032471) #16 Zfp423 (MGP_SPRETEiJ_G0032470) #18 4933402J07Rik (MGP_SPRETEiJ_G0032469) #19 Cbln1 (MGP_SPRETEiJ_G0032468) #20 N4bp1 (MGP_SPRETEiJ_G0032467) #21 MGP_SPRETEiJ_G0032466 MGP_SPRETEiJ_G0032465 #22 Lonp2 (MGP_SPRETEiJ_G0032464) #23 Abcc12 (MGP_SPRETEiJ_G0032463) #25 Phkb (MGP_SPRETEiJ_G0032462) #27 Itfg1 (MGP_SPRETEiJ_G0032461) #28 Neto2 (MGP_SPRETEiJ_G0032460) #29 MGP_SPRETEiJ_G0032459 Dnaja2 (MGP_SPRETEiJ_G0032458) #31 Gpt2 (MGP_SPRETEiJ_G0032457) #32 Mylk3 (MGP_SPRETEiJ_G0032456) #34 Orc6 (MGP_SPRETEiJ_G0032455) #35 Vps35 (MGP_SPRETEiJ_G0032454) #36 Or7c19 (MGP_SPRETEiJ_G0032453) Zfp791 (MGP_SPRETEiJ_G0032452) Man2b1 (MGP_SPRETEiJ_G0032451) Wdr83os (MGP_SPRETEiJ_G0032450) Shrew mouse MODERN SPECIES 23 Trappc2 (MGP_PahariEiJ_G0032111) Ofd1 (MGP_PahariEiJ_G0032110) Gpm6b (MGP_PahariEiJ_G0032109) Gemin8 (MGP_PahariEiJ_G0032108) Glra2 (MGP_PahariEiJ_G0032107) Fancb (MGP_PahariEiJ_G0032106) Mospd2 (MGP_PahariEiJ_G0032105) Asb9 (MGP_PahariEiJ_G0032104) Asb11 (MGP_PahariEiJ_G0032103) MGP_PahariEiJ_G0032102 Vegfd (MGP_PahariEiJ_G0032101) Pir (MGP_PahariEiJ_G0032100) Bmx (MGP_PahariEiJ_G0032099) Ace2 (MGP_PahariEiJ_G0032098) Cltrn (MGP_PahariEiJ_G0032097) Siah1b (MGP_PahariEiJ_G0032096) #22 Car5b (MGP_PahariEiJ_G0032095) Zrsr2 (MGP_PahariEiJ_G0032094) Ap1s2 (MGP_PahariEiJ_G0032093) Rnf138rt1 (MGP_PahariEiJ_G0032092) Grpr (MGP_PahariEiJ_G0032091) S100g (MGP_PahariEiJ_G0032090) Ctps2 (MGP_PahariEiJ_G0032089) Syap1 (MGP_PahariEiJ_G0032088) Txlng (MGP_PahariEiJ_G0032087) Rbbp7 (MGP_PahariEiJ_G0032086) Reps2 (MGP_PahariEiJ_G0032085) Nhs (MGP_PahariEiJ_G0032084) Rai2 (MGP_PahariEiJ_G0032083) MGP_PahariEiJ_G0032082 Gja6 (MGP_PahariEiJ_G0032081) Muroidea_A ANCESTRAL SPECIES ENSGT00940000154837.f.y.b #22 Murinae ANCESTRAL SPECIES 15 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f.y.b #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000164424 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT01030000234638.b.a.a ENSGT00390000002121 Mus ANCESTRAL SPECIES 6 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f.y.b #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000164424 ENSGT00950000182755.b.a.a.a.a.a.b.d.b ENSGT01030000234638.b.a.a ENSGT00390000002121 Mus_A ANCESTRAL SPECIES 8 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f.y.b #22 ENSGT00860000136300 ENSGT00940000154837.f.y.a #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000164424 ENSGT00950000182755.b.a.a.a.a.a.b.d.b Mus_B ANCESTRAL SPECIES 6 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f.y.b #22 ENSGT00860000136300 ENSGT00940000154837.f.y.a #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000164424 ENSGT00950000182755.b.a.a.a.a.a.b.d.b Mus_C ANCESTRAL SPECIES 5 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f.y.b #22 ENSGT00860000136300 ENSGT00940000154837.f.y.a #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000164424 ENSGT00950000182755.b.a.a.a.a.a.b.d.b Steppe mouse MODERN SPECIES 3149 Tent4b (ENSMSIG00000015046) #14 Heatr3 (ENSMSIG00000014972) #15 Cnep1r1 (ENSMSIG00000014910) #16 Zfp423 (ENSMSIG00000014783) #18 ENSMSIG00000014762 4933402J07Rik (ENSMSIG00000014743) #19 Cbln1 (ENSMSIG00000014701) #20 ENSMSIG00000014694 N4bp1 (ENSMSIG00000014641) #21 ENSMSIG00000014629 #22 Lonp2 (ENSMSIG00000014552) #23 Abcc12 (ENSMSIG00000014487) #25 ENSMSIG00000014471 Phkb (ENSMSIG00000014316) #27 ENSMSIG00000014284 #28 Mouse MODERN SPECIES 17 Tox3 (ENSMUSG00000043668) Sall1 (ENSMUSG00000031665) Cyld (ENSMUSG00000036712) #8 Nod2 (ENSMUSG00000055994) #9 Snx20 (ENSMUSG00000031662) #10 Nkd1 (ENSMUSG00000031661) #11 Brd7 (ENSMUSG00000031660) #12 Adcy7 (ENSMUSG00000031659) #13 Tent4b (ENSMUSG00000036779) #14 Heatr3 (ENSMUSG00000031657) #15 Cnep1r1 (ENSMUSG00000036810) #16 Zfp423 (ENSMUSG00000045333) #18 4933402J07Rik (ENSMUSG00000069971) #19 Cbln1 (ENSMUSG00000031654) #20 N4bp1 (ENSMUSG00000031652) #21 Siah1a (ENSMUSG00000036840) #22 Lonp2 (ENSMUSG00000047866) #23 Abcc12 (ENSMUSG00000036872) #25 Phkb (ENSMUSG00000036879) #27 Itfg1 (ENSMUSG00000031703) #28 Neto2 (ENSMUSG00000036902) #29 Dnaja2 (ENSMUSG00000031701) #31 Gpt2 (ENSMUSG00000031700) #32 4921524J17Rik (ENSMUSG00000036934) #33 Mylk3 (ENSMUSG00000031698) #34 Orc6 (ENSMUSG00000031697) #35 Vps35 (ENSMUSG00000031696) #36 Or7c19 (ENSMUSG00000051952) Cks1brt (ENSMUSG00000062687) Zfp791 (ENSMUSG00000074194) Man2b1 (ENSMUSG00000005142) Shrew mouse MODERN SPECIES 12 Chd9 (MGP_PahariEiJ_G0022964) MGP_PahariEiJ_G0022963 Tox3 (MGP_PahariEiJ_G0022962) Sall1 (MGP_PahariEiJ_G0022961) Cyld (MGP_PahariEiJ_G0022960) #8 Nod2 (MGP_PahariEiJ_G0022959) #9 Snx20 (MGP_PahariEiJ_G0022958) #10 Nkd1 (MGP_PahariEiJ_G0022957) #11 Brd7 (MGP_PahariEiJ_G0022956) #12 Adcy7 (MGP_PahariEiJ_G0022955) #13 Tent4b (MGP_PahariEiJ_G0022954) #14 Zfp423 (MGP_PahariEiJ_G0022953) #18 4933402J07Rik (MGP_PahariEiJ_G0022952) #19 Cbln1 (MGP_PahariEiJ_G0022951) #20 N4bp1 (MGP_PahariEiJ_G0022950) #21 Siah1a (MGP_PahariEiJ_G0022949) #22 Lonp2 (MGP_PahariEiJ_G0022948) #23 Abcc12 (MGP_PahariEiJ_G0022947) #25 Phkb (MGP_PahariEiJ_G0022946) #27 MGP_PahariEiJ_G0022945 #29 MGP_PahariEiJ_G0022944 Dnaja2 (MGP_PahariEiJ_G0022943) #31 Gpt2 (MGP_PahariEiJ_G0022942) #32 Mylk3 (MGP_PahariEiJ_G0022941) #34 Orc6 (MGP_PahariEiJ_G0022940) #35 Vps35 (MGP_PahariEiJ_G0022939) #36 Or7c19 (MGP_PahariEiJ_G0022938) Zfp791 (MGP_PahariEiJ_G0022937) Man2b1 (MGP_PahariEiJ_G0022936) Wdr83 (MGP_PahariEiJ_G0022935) Dhps (MGP_PahariEiJ_G0022934) Rat MODERN SPECIES 10 Sall1 (ENSRNOG00000013907) Cyld (ENSRNOG00000014048) #8 Nod2 (ENSRNOG00000014124) #9 Snx20 (ENSRNOG00000014202) #10 Nkd1 (ENSRNOG00000014293) #11 Brd7 (ENSRNOG00000014419) #12 Adcy7 (ENSRNOG00000014776) #13 Tent4b (ENSRNOG00000024212) #14 Heatr3 (ENSRNOG00000015459) #15 Cnep1r1 (ENSRNOG00000015534) #16 Zfp423 (ENSRNOG00000014658) #18 LOC680913 (ENSRNOG00000024182) #19 Cbln1 (ENSRNOG00000000010) #20 Rps15a-ps3 (ENSRNOG00000055046) N4bp1 (ENSRNOG00000015121) #21 Siah1 (ENSRNOG00000015143) #22 Lonp2 (ENSRNOG00000015162) #23 Abcc12 (ENSRNOG00000015666) #25 Phkb (ENSRNOG00000024101) #27 Itfg1 (ENSRNOG00000015843) #28 Neto2 (ENSRNOG00000016245) #29 Dnaja2 (ENSRNOG00000016251) #31 Gpt2 (ENSRNOG00000059579) #32 RGD1308706 (ENSRNOG00000017090) #33 ENSRNOG00000070220 AC131806.3 (ENSRNOG00000058218) Mylk3 (ENSRNOG00000017546) #34 Orc6 (ENSRNOG00000024043) #35 Vps35 (ENSRNOG00000017612) #36 Or7c19 (ENSRNOG00000017868) ENSRNOG00000069573 Cricetidae ANCESTRAL SPECIES ENSGT00940000154837.f.y.b #22 Cricetinae ANCESTRAL SPECIES ENSGT00940000154837.f.y.b #22 Golden Hamster MODERN SPECIES 706 Nod2 (ENSMAUG00000004325) #9 Snx20 (ENSMAUG00000020254) #10 Nkd1 (ENSMAUG00000000515) #11 Brd7 (ENSMAUG00000000695) #12 Adcy7 (ENSMAUG00000005638) #13 Tent4b (ENSMAUG00000018042) #14 Heatr3 (ENSMAUG00000020748) #15 Cnep1r1 (ENSMAUG00000012481) #16 ENSMAUG00000013750 Zfp423 (ENSMAUG00000015448) #18 ENSMAUG00000019410 ENSMAUG00000015721 4933402J07Rik (ENSMAUG00000017355) #19 Cbln1 (ENSMAUG00000020791) #20 N4bp1 (ENSMAUG00000019066) #21 Siah1a (ENSMAUG00000001370) #22 ENSMAUG00000017496 ENSMAUG00000001567 #23 Abcc12 (ENSMAUG00000005078) #25 Phkb (ENSMAUG00000016799) #27 Itfg1 (ENSMAUG00000011749) #28 Neto2 (ENSMAUG00000005646) #29 ENSMAUG00000008382 Dnaja2 (ENSMAUG00000013341) #31 Gpt2 (ENSMAUG00000017417) #32 Muroidea_A ANCESTRAL SPECIES ENSGT00940000154837.f.z #22 Murinae ANCESTRAL SPECIES ENSGT00940000154837.f.z #22 Mus ANCESTRAL SPECIES ENSGT00940000154837.f.z #22 Mus_A ANCESTRAL SPECIES ENSGT00940000154837.f.z #22 Mus_B ANCESTRAL SPECIES ENSGT00940000154837.f.z #22 Mus_C ANCESTRAL SPECIES ENSGT00940000154837.f.z #22 spretus MODERN SPECIES 19 Trappc2 (MGP_SPRETEiJ_G0034742) Ofd1 (MGP_SPRETEiJ_G0034741) Gpm6b (MGP_SPRETEiJ_G0034740) Gemin8 (MGP_SPRETEiJ_G0034739) Glra2 (MGP_SPRETEiJ_G0034738) Fancb (MGP_SPRETEiJ_G0034737) Mospd2 (MGP_SPRETEiJ_G0034736) Asb9 (MGP_SPRETEiJ_G0034735) Asb11 (MGP_SPRETEiJ_G0034734) Piga (MGP_SPRETEiJ_G0034733) Vegfd (MGP_SPRETEiJ_G0034732) Pir (MGP_SPRETEiJ_G0034731) Bmx (MGP_SPRETEiJ_G0034730) Ace2 (MGP_SPRETEiJ_G0034729) Cltrn (MGP_SPRETEiJ_G0034728) MGP_SPRETEiJ_G0034727 #22 Car5b (MGP_SPRETEiJ_G0034726) Zrsr2 (MGP_SPRETEiJ_G0034725) Ap1s2 (MGP_SPRETEiJ_G0034724) Rnf138rt1 (MGP_SPRETEiJ_G0034723) Grpr (MGP_SPRETEiJ_G0034722) S100g (MGP_SPRETEiJ_G0034721) Ctps2 (MGP_SPRETEiJ_G0034720) Syap1 (MGP_SPRETEiJ_G0034719) Txlng (MGP_SPRETEiJ_G0034718) Rbbp7 (MGP_SPRETEiJ_G0034717) Reps2 (MGP_SPRETEiJ_G0034716) Nhs (MGP_SPRETEiJ_G0034715) Rai2 (MGP_SPRETEiJ_G0034714) MGP_SPRETEiJ_G0034713 Gja6 (MGP_SPRETEiJ_G0034712) Laurasiatheria ANCESTRAL SPECIES 5 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00960000190798 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00390000005105 #30 ENSGT00940000154688.b #31 ENSGT00990000204193 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 Laurasiatheria_a ANCESTRAL SPECIES 5 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00960000190798 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00390000005105 #30 ENSGT00940000154688.b #31 ENSGT00990000204193 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 Artiodactyla ANCESTRAL SPECIES 5 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00960000190798 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00990000204193 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 ENSGT00390000001014 Suina ANCESTRAL SPECIES 2 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 ENSGT00390000001014 ENSGT00940000161356 Pig MODERN SPECIES 14 TOX3 (ENSSSCG00000002835) SALL1 (ENSSSCG00000002836) CYLD (ENSSSCG00000040286) #8 NOD2 (ENSSSCG00000038073) #9 SNX20 (ENSSSCG00000025741) #10 NKD1 (ENSSSCG00000039875) #11 BRD7 (ENSSSCG00000021644) #12 ADCY7 (ENSSSCG00000039408) #13 TENT4B (ENSSSCG00000062607) #14 HEATR3 (ENSSSCG00000040887) #15 CNEP1R1 (ENSSSCG00000036005) #16 ZNF423 (ENSSSCG00000002838) #18 C16orf78 (ENSSSCG00000002839) #19 CBLN1 (ENSSSCG00000040652) #20 N4BP1 (ENSSSCG00000002841) #21 SIAH1 (ENSSSCG00000037263) #22 LONP2 (ENSSSCG00000023391) #23 ABCC11 (ENSSSCG00000032298) #24 ABCC12 (ENSSSCG00000022813) #25 PHKB (ENSSSCG00000002844) #27 ITFG1 (ENSSSCG00000033527) #28 NETO2 (ENSSSCG00000026318) #29 DNAJA2 (ENSSSCG00000002846) #31 GPT2 (ENSSSCG00000002847) #32 C16orf87 (ENSSSCG00000022333) #33 MYLK3 (ENSSSCG00000036874) #34 ORC6 (ENSSSCG00000024443) #35 VPS35 (ENSSSCG00000026239) #36 SHCBP1 (ENSSSCG00000002849) #37 ENSSSCG00000002850 ENSSSCG00000038906 Chacoan peccary MODERN SPECIES 105 ENSCWAG00000002812 #12 ENSCWAG00000002798 #12 ADCY7 (ENSCWAG00000002780) #13 TENT4B (ENSCWAG00000002755) #14 HEATR3 (ENSCWAG00000002737) #15 CNEP1R1 (ENSCWAG00000002721) #16 ZNF423 (ENSCWAG00000002702) #18 C16orf78 (ENSCWAG00000002696) #19 CBLN1 (ENSCWAG00000002688) #20 N4BP1 (ENSCWAG00000002680) #21 SIAH1 (ENSCWAG00000002671) #22 LONP2 (ENSCWAG00000002606) #23 Artiodactyla_a ANCESTRAL SPECIES 4 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00940000166964 ENSGT00960000190798 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00990000204193 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 ENSGT00390000001014 Camelidae ANCESTRAL SPECIES 9 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 ENSGT00390000001014 ENSGT00390000010067 Arabian camel MODERN SPECIES 35 TOX3 (ENSCDRG00005001153) SALL1 (ENSCDRG00005001107) CYLD (ENSCDRG00005001037) #8 NOD2 (ENSCDRG00005000930) #9 SNX20 (ENSCDRG00005000889) #10 NKD1 (ENSCDRG00005000863) #11 BRD7 (ENSCDRG00005000831) #12 ADCY7 (ENSCDRG00005000750) #13 TENT4B (ENSCDRG00005000655) #14 HEATR3 (ENSCDRG00005000603) #15 CNEP1R1 (ENSCDRG00005000581) #16 ZNF423 (ENSCDRG00005000552) #18 C16orf78 (ENSCDRG00005000529) #19 CBLN1 (ENSCDRG00005000510) #20 N4BP1 (ENSCDRG00005000490) #21 SIAH1 (ENSCDRG00005000466) #22 LONP2 (ENSCDRG00005000407) #23 ABCC11 (ENSCDRG00005000144) #24 ABCC12 (ENSCDRG00005022311) #25 PHKB (ENSCDRG00005022272) #27 ITFG1 (ENSCDRG00005022204) #28 NETO2 (ENSCDRG00005022162) #29 DNAJA2 (ENSCDRG00005022140) #31 GPT2 (ENSCDRG00005022050) #32 ENSCDRG00005022000 #33 MYLK3 (ENSCDRG00005021954) #34 ORC6 (ENSCDRG00005021936) #35 VPS35 (ENSCDRG00005021932) #36 SHCBP1 (ENSCDRG00005021912) #37 ENSCDRG00005021909 UQCRFS1 (ENSCDRG00005021891) Artiodactyla_b ANCESTRAL SPECIES 4 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00960000190798 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00990000204193 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 ENSGT00390000001014 Pecora DUPLICATION Pecora DUPLICATION Pecora ANCESTRAL SPECIES 4 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f.a.a #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00990000204193 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 ENSGT00940000153229.A.a.a Yarkand deer MODERN SPECIES 27 ENSCHYG00000005452 SALL1 (ENSCHYG00000005364) CYLD (ENSCHYG00000005179) #8 NOD2 (ENSCHYG00000005036) #9 SNX20 (ENSCHYG00000004988) #10 NKD1 (ENSCHYG00000004944) #11 BRD7 (ENSCHYG00000004908) #12 ADCY7 (ENSCHYG00000004827) #13 TENT4B (ENSCHYG00000004780) #14 HEATR3 (ENSCHYG00000004729) #15 CNEP1R1 (ENSCHYG00000004697) #16 ZNF423 (ENSCHYG00000004665) #18 C16orf78 (ENSCHYG00000004643) #19 CBLN1 (ENSCHYG00000004635) #20 N4BP1 (ENSCHYG00000004618) #21 ENSCHYG00000004605 #22 LONP2 (ENSCHYG00000004582) #23 ABCC11 (ENSCHYG00000004542) #24 ABCC12 (ENSCHYG00000004510) #25 ENSCHYG00000004492 ENSCHYG00000002555 #27 ITFG1 (ENSCHYG00000001906) #28 ENSCHYG00000001892 NETO2 (ENSCHYG00000001873) #29 DNAJA2 (ENSCHYG00000001848) #31 GPT2 (ENSCHYG00000001813) #32 ENSCHYG00000001787 #33 MYLK3 (ENSCHYG00000001728) #34 ORC6 (ENSCHYG00000001691) #35 VPS35 (ENSCHYG00000001622) #36 SHCBP1 (ENSCHYG00000001586) #37 Percora_a ANCESTRAL SPECIES 4 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f.a.a #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00990000204193 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 ENSGT00940000153229.A.a.a Bovidae ANCESTRAL SPECIES 4 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f.a.a #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000155525.j ENSGT00940000154688.b #31 ENSGT00990000204193 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 Bovinae ANCESTRAL SPECIES 3 ENSGT00960000189733 #7 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f.a.a #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000155525.j ENSGT00940000154688.b #31 ENSGT00990000204193 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 Bos ANCESTRAL SPECIES 4 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00960000187150 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f.a.a #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT01100000263480.a.a.a.a.b.b.a.a.a.a.a.b ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000155525.j ENSGT00940000156041 #29 ENSGT00940000154688.b.l #31 ENSGT00990000204193 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315.k.a #36 Bos_a ANCESTRAL SPECIES 22 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00390000003561.m.c.a ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00960000187150 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f.a.a #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT01100000263480.a.a.a.a.b.b.a.a.a.a.a.b ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000155525.j ENSGT00940000156041 #29 ENSGT00990000204193 ENSGT00940000154688.b.l #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315.k.a #36 Wild yak MODERN SPECIES 2234 N4BP1 (ENSBMUG00000016350) #21 ENSBMUG00000016336 #22 LONP2 (ENSBMUG00000016315) #23 ABCC11 (ENSBMUG00000016214) #24 ABCC12 (ENSBMUG00000016025) #25 ENSBMUG00000015976 #27 Domestic yak MODERN SPECIES 12 SNX20 (ENSBGRG00000006807) #10 NKD1 (ENSBGRG00000007093) #11 ENSBGRG00000007550 BRD7 (ENSBGRG00000007865) #12 ADCY7 (ENSBGRG00000008786) #13 TENT4B (ENSBGRG00000009967) #14 ENSBGRG00000010894 ENSBGRG00000010983 HEATR3 (ENSBGRG00000011232) #15 ENSBGRG00000011559 CNEP1R1 (ENSBGRG00000011705) #16 ZNF423 (ENSBGRG00000012116) #18 C16orf78 (ENSBGRG00000012467) #19 CBLN1 (ENSBGRG00000012677) #20 N4BP1 (ENSBGRG00000012870) #21 ENSBGRG00000013045 #22 LONP2 (ENSBGRG00000013373) #23 ABCC11 (ENSBGRG00000014263) #24 ENSBGRG00000014670 ABCC12 (ENSBGRG00000014865) #25 PHKB (ENSBGRG00000015830) #27 ITFG1 (ENSBGRG00000016573) #28 NETO2 (ENSBGRG00000017316) #29 DNAJA2 (ENSBGRG00000017976) #31 GPT2 (ENSBGRG00000018375) #32 C16orf87 (ENSBGRG00000018654) #33 MYLK3 (ENSBGRG00000019153) #34 ORC6 (ENSBGRG00000019858) #35 ENSBGRG00000020208 #36 ENSBGRG00000020551 SHCBP1 (ENSBGRG00000020652) #37 Bos_b ANCESTRAL SPECIES ENSGT00390000018141.i.a.b.b.b.a.b.b.a.b.b ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f.a.a #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT01100000263480.a.a.a.a.b.b.a.a.a.a.a.b ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000155525.j ENSGT00940000156041 #29 ENSGT00990000204193 ENSGT00940000154688.b.l #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315.k.a #36 Cow MODERN SPECIES 9 CYLD (ENSBTAG00000006291) #8 NOD2 (ENSBTAG00000020936) #9 SNX20 (ENSBTAG00000003961) #10 NKD1 (ENSBTAG00000012295) #11 BRD7 (ENSBTAG00000021575) #12 ADCY7 (ENSBTAG00000006208) #13 TENT4B (ENSBTAG00000007942) #14 HEATR3 (ENSBTAG00000016640) #15 CNEP1R1 (ENSBTAG00000033078) #16 ENSBTAG00000052469 ENSBTAG00000051062 ZNF423 (ENSBTAG00000017397) #18 C18H16orf78 (ENSBTAG00000008720) #19 CBLN1 (ENSBTAG00000015194) #20 N4BP1 (ENSBTAG00000019938) #21 SIAH1 (ENSBTAG00000010868) #22 LONP2 (ENSBTAG00000010867) #23 ABCC11 (ENSBTAG00000010858) #24 ABCC12 (ENSBTAG00000044191) #25 PHKB (ENSBTAG00000004806) #27 ITFG1 (ENSBTAG00000004805) #28 ENSBTAG00000053690 NETO2 (ENSBTAG00000014370) #29 ENSBTAG00000054464 DNAJA2 (ENSBTAG00000003757) #31 GPT2 (ENSBTAG00000002980) #32 C18H16orf87 (ENSBTAG00000003503) #33 MYLK3 (ENSBTAG00000014818) #34 ORC6 (ENSBTAG00000001872) #35 VPS35 (ENSBTAG00000002493) #36 ENSBTAG00000025283 Hybrid Bos Indicus MODERN SPECIES 9 SALL1 (ENSBIXG00005006737) CYLD (ENSBIXG00005014346) #8 NOD2 (ENSBIXG00005014215) #9 SNX20 (ENSBIXG00005005704) #10 NKD1 (ENSBIXG00005005932) #11 BRD7 (ENSBIXG00005014141) #12 ADCY7 (ENSBIXG00005014084) #13 TENT4B (ENSBIXG00005007491) #14 HEATR3 (ENSBIXG00005013925) #15 ENSBIXG00005005400 CNEP1R1 (ENSBIXG00005001738) #16 ZNF423 (ENSBIXG00005005395) #18 C16orf78 (ENSBIXG00005013700) #19 CBLN1 (ENSBIXG00005001667) #20 N4BP1 (ENSBIXG00005013624) #21 ENSBIXG00005013587 #22 LONP2 (ENSBIXG00005013538) #23 ABCC11 (ENSBIXG00005013461) #24 ENSBIXG00005013363 ABCC12 (ENSBIXG00005007115) #25 ENSBIXG00005005390 ENSBIXG00005013270 PHKB (ENSBIXG00005001511) #27 ENSBIXG00005013037 ITFG1 (ENSBIXG00005013019) #28 NETO2 (ENSBIXG00005001469) #29 ENSBIXG00005012947 ENSBIXG00005001455 DNAJA2 (ENSBIXG00005012920) #31 ENSBIXG00005012897 GPT2 (ENSBIXG00005012865) #32 American bison MODERN SPECIES 3111 ZNF423 (ENSBBBG00000004327) #18 ENSBBBG00000017453 C16orf78 (ENSBBBG00000007267) #19 CBLN1 (ENSBBBG00000017429) #20 N4BP1 (ENSBBBG00000004311) #21 ENSBBBG00000017408 #22 LONP2 (ENSBBBG00000017392) #23 ABCC11 (ENSBBBG00000004282) #24 ABCC12 (ENSBBBG00000017067) #25 PHKB (ENSBBBG00000016907) #27 ITFG1 (ENSBBBG00000016792) #28 NETO2 (ENSBBBG00000008556) #29 ENSBBBG00000004136 DNAJA2 (ENSBBBG00000016724) #31 ENSBBBG00000000726 GPT2 (ENSBBBG00000000730) #32 C16orf87 (ENSBBBG00000016694) #33 MYLK3 (ENSBBBG00000016672) #34 ORC6 (ENSBBBG00000016634) #35 VPS35 (ENSBBBG00000004106) #36 SHCBP1 (ENSBBBG00000016599) #37 Caprinae ANCESTRAL SPECIES 4 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f.a.a #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00990000204193 ENSGT00940000154688.b.i #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 ENSGT00940000153229.A.a.a Rambouillet Sheep MODERN SPECIES 5 NOD2 (ENSOARG00020006729) #9 SNX20 (ENSOARG00020006621) #10 NKD1 (ENSOARG00020006504) #11 ENSOARG00020006477 BRD7 (ENSOARG00020006275) #12 ADCY7 (ENSOARG00020006198) #13 TENT4B (ENSOARG00020006032) #14 HEATR3 (ENSOARG00020005991) #15 CNEP1R1 (ENSOARG00020005909) #16 ENSOARG00020005883 ZNF423 (ENSOARG00020005823) #18 C16orf78 (ENSOARG00020005789) #19 CBLN1 (ENSOARG00020005764) #20 ENSOARG00020005755 N4BP1 (ENSOARG00020005726) #21 ENSOARG00020005714 #22 LONP2 (ENSOARG00020005643) #23 ABCC12 (ENSOARG00020005118) #25 ENSOARG00020005096 ENSOARG00020005082 ITFG1 (ENSOARG00020004914) #28 NETO2 (ENSOARG00020004813) #29 ENSOARG00020004784 DNAJA2 (ENSOARG00020004751) #31 GPT2 (ENSOARG00020004699) #32 C14H16orf87 (ENSOARG00020004624) #33 MYLK3 (ENSOARG00020004459) #34 ORC6 (ENSOARG00020004404) #35 VPS35 (ENSOARG00020004298) #36 SHCBP1 (ENSOARG00020004241) #37 ENSOARG00020004215 Goat MODERN SPECIES 9 ENSCHIG00000011085 CYLD (ENSCHIG00000026390) #8 NOD2 (ENSCHIG00000024746) #9 SNX20 (ENSCHIG00000026020) #10 NKD1 (ENSCHIG00000022144) #11 BRD7 (ENSCHIG00000023787) #12 ADCY7 (ENSCHIG00000025184) #13 TENT4B (ENSCHIG00000021933) #14 HEATR3 (ENSCHIG00000016750) #15 CNEP1R1 (ENSCHIG00000021937) #16 ZNF423 (ENSCHIG00000027139) #18 C16orf78 (ENSCHIG00000026888) #19 CBLN1 (ENSCHIG00000016657) #20 ENSCHIG00000020063 N4BP1 (ENSCHIG00000019641) #21 ENSCHIG00000017834 #22 LONP2 (ENSCHIG00000027250) #23 ABCC11 (ENSCHIG00000001779) #24 ABCC12 (ENSCHIG00000022733) #25 PHKB (ENSCHIG00000015267) #27 ENSCHIG00000010050 ITFG1 (ENSCHIG00000020564) #28 NETO2 (ENSCHIG00000014739) #29 ENSCHIG00000000692 ENSCHIG00000023464 #31 GPT2 (ENSCHIG00000027095) #32 C16orf87 (ENSCHIG00000024479) #33 MYLK3 (ENSCHIG00000019555) #34 ORC6 (ENSCHIG00000022439) #35 VPS35 (ENSCHIG00000025912) #36 SHCBP1 (ENSCHIG00000022997) #37 Siberian musk deer MODERN SPECIES 1191 N4BP1 (ENSMMSG00000008356) #21 ENSMMSG00000008331 ENSMMSG00000008303 #22 LONP2 (ENSMMSG00000008241) #23 ABCC11 (ENSMMSG00000007923) #24 ABCC12 (ENSMMSG00000007739) #25 PHKB (ENSMMSG00000007449) #27 ITFG1 (ENSMMSG00000007334) #28 NETO2 (ENSMMSG00000007241) #29 DNAJA2 (ENSMMSG00000007217) #31 GPT2 (ENSMMSG00000007182) #32 C16orf87 (ENSMMSG00000007167) #33 MYLK3 (ENSMMSG00000007045) #34 ENSMMSG00000006974 #35 VPS35 (ENSMMSG00000006901) #36 SHCBP1 (ENSMMSG00000006807) #37 ENSMMSG00000006777 GAS8 (ENSMMSG00000006712) Pecora ANCESTRAL SPECIES 3 ENSGT00510000048550 ENSGT00950000183124.B ENSGT00390000007831 ENSGT00940000158113 ENSGT00390000017740.a.a ENSGT00940000158692 ENSGT00390000006913 ENSGT00940000161222 ENSGT01050000244940.b ENSGT00390000012979 ENSGT00940000163109 ENSGT00940000155240.A ENSGT00940000157643 ENSGT00940000160401 ENSGT00940000159226 ENSGT00940000154837.f.a.b #22 ENSGT00940000158420 ENSGT00940000157502 ENSGT00950000182937.B.b ENSGT00390000007890 ENSGT00390000018424 ENSGT00390000009583 ENSGT00950000182824.a.a.a ENSGT00390000003526 ENSGT01050000244882.a.a.a.a ENSGT00940000160095 ENSGT00390000013286 ENSGT00940000154932.A ENSGT00940000161214 ENSGT00940000157309 ENSGT00940000157098 Percora_a ANCESTRAL SPECIES 3 ENSGT00510000048550 ENSGT00950000183124.B ENSGT00390000007831 ENSGT00940000158113 ENSGT00390000017740.a.a ENSGT00940000158692 ENSGT00390000006913 ENSGT00940000161222 ENSGT01050000244940.b ENSGT00390000012979 ENSGT00940000163109 ENSGT00940000155240.A ENSGT00940000157643 ENSGT00940000160401 ENSGT00940000159226 ENSGT00940000154837.f.a.b #22 ENSGT00940000158420 ENSGT00940000157502 ENSGT00950000182937.B.b ENSGT00390000007890 ENSGT00390000018424 ENSGT00390000009583 ENSGT00950000182824.a.a.a ENSGT00390000003526 ENSGT01050000244882.a.a.a.a ENSGT00940000160095 ENSGT00390000013286 ENSGT00940000154932.A ENSGT00940000161214 ENSGT00940000157309 ENSGT00940000157098 Bovidae ANCESTRAL SPECIES 3 ENSGT00510000048550 ENSGT00950000183124.B ENSGT00390000007831 ENSGT00940000158113 ENSGT00390000017740.a.a ENSGT00940000158692 ENSGT00390000006913 ENSGT00940000161222 ENSGT01050000244940.b ENSGT00390000012979 ENSGT00940000163109 ENSGT00940000155240.A ENSGT00940000157643 ENSGT00940000160401 ENSGT00940000159226 ENSGT00940000154837.f.a.b #22 ENSGT00940000158420 ENSGT00940000157502 ENSGT00950000182937.B.b ENSGT00390000007890 ENSGT00390000018424 ENSGT00390000009583 ENSGT00950000182824.a.a.a ENSGT00390000003526 ENSGT01050000244882.a.a.a.a ENSGT00940000160095 ENSGT00390000013286 ENSGT00940000154932.A ENSGT00940000161214 ENSGT00940000157309 ENSGT00940000157098 Bovinae ANCESTRAL SPECIES 17 ENSGT00940000153095.g.b.b.d.a ENSGT00950000183124.B ENSGT00390000007831 ENSGT00940000158113 ENSGT00390000017740.a.a ENSGT00940000158692 ENSGT00390000006913 ENSGT00940000161222 ENSGT01050000244940.b ENSGT00390000012979 ENSGT00940000163109 ENSGT00940000155240.A ENSGT00940000157643 ENSGT00940000160401 ENSGT00940000159226 ENSGT00940000154837.f.a.b #22 ENSGT00940000158420 ENSGT00940000157502 ENSGT00950000182937.B.b ENSGT00390000007890 ENSGT00390000018424 ENSGT00390000009583 ENSGT00950000182824.a.a.a ENSGT00390000003526 ENSGT01050000244882.a.a.a.a ENSGT00940000160095 ENSGT00390000013286 ENSGT00940000154932.A ENSGT00940000161214 ENSGT00940000157309 ENSGT00940000157098 Bos ANCESTRAL SPECIES 2 ENSGT00950000183124.B ENSGT00390000007831 ENSGT00940000158113 ENSGT00390000017740.a.a ENSGT00940000158692 ENSGT00390000006913 ENSGT00940000161222 ENSGT00390000018141.i.a.b.b.b.a.b.b.b.b.b ENSGT01050000244940.b ENSGT00390000012979.x ENSGT00940000163109 ENSGT00940000155240.A ENSGT00940000157643 ENSGT00940000160401 ENSGT00940000159226 ENSGT00940000154837.f.a.b #22 ENSGT00940000158420 ENSGT00940000157502 ENSGT00950000182937.B.b ENSGT00390000007890 ENSGT00390000018424 ENSGT00390000009583 ENSGT00950000182824.a.a.a ENSGT00390000003526 ENSGT01050000244882.a.a.a.a ENSGT00940000160095 ENSGT00390000013286 ENSGT01100000263480.a.b.b.a.b.b.b.b.a.a.a.b.a.b ENSGT00940000154932.A ENSGT00940000161214 ENSGT00940000172584 Bos_a ANCESTRAL SPECIES 3 ENSGT00390000007831 ENSGT00940000158113 ENSGT00390000017740.a.a ENSGT00940000158692 ENSGT00950000185293 ENSGT00390000006913 ENSGT00940000161222 ENSGT00390000018141.i.a.b.b.b.a.b.b.b.b.b ENSGT01050000244940.b ENSGT00390000012979.x ENSGT00940000163109 ENSGT00940000155240.A ENSGT00940000157643 ENSGT00940000160401 ENSGT00940000159226 ENSGT00940000154837.f.a.b #22 ENSGT00940000158420 ENSGT00940000157502 ENSGT00950000182937.B.b ENSGT00390000007890 ENSGT00390000018424 ENSGT00390000009583 ENSGT00950000182824.a.a.a ENSGT00390000003526 ENSGT01050000244882.a.a.a.a ENSGT00940000160095 ENSGT00390000013286 ENSGT01100000263480.a.b.b.a.b.b.b.b.a.a.a.b.a.b ENSGT00940000154932.A ENSGT00940000161214 ENSGT00940000172584 Wild yak MODERN SPECIES 1425 WIF1 (ENSBMUG00000024654) TBC1D30 (ENSBMUG00000024682) ENSBMUG00000024699 #22 GNS (ENSBMUG00000024719) RASSF3 (ENSBMUG00000024725) TBK1 (ENSBMUG00000024743) XPOT (ENSBMUG00000024756) C12orf56 (ENSBMUG00000024778) KICS2 (ENSBMUG00000024788) SRGAP1 (ENSBMUG00000024813) RXYLT1 (ENSBMUG00000024827) ENSBMUG00000024835 AVPR1A (ENSBMUG00000024841) Domestic yak MODERN SPECIES 24 ENSBGRG00000020011 GRIP1 (ENSBGRG00000019259) ENSBGRG00000019195 HELB (ENSBGRG00000019099) ENSBGRG00000019078 IRAK3 (ENSBGRG00000018895) ENSBGRG00000018872 TMBIM4 (ENSBGRG00000018533) LLPH (ENSBGRG00000018482) HMGA2 (ENSBGRG00000018376) ENSBGRG00000018311 ENSBGRG00000018295 ENSBGRG00000018174 LEMD3 (ENSBGRG00000018023) WIF1 (ENSBGRG00000017933) ENSBGRG00000017916 #22 TBC1D30 (ENSBGRG00000017676) GNS (ENSBGRG00000017029) RASSF3 (ENSBGRG00000016976) TBK1 (ENSBGRG00000016670) C12orf56 (ENSBGRG00000016255) XPOT (ENSBGRG00000016168) KICS2 (ENSBGRG00000016102) ENSBGRG00000016076 SRGAP1 (ENSBGRG00000015742) RXYLT1 (ENSBGRG00000015661) AVPR1A (ENSBGRG00000015589) PPM1H (ENSBGRG00000015365) MON2 (ENSBGRG00000010558) ENSBGRG00000010369 USP15 (ENSBGRG00000009962) Bos_b ANCESTRAL SPECIES 4 ENSGT00950000183124.B ENSGT00390000007831 ENSGT00940000158113 ENSGT00390000017740.a.a ENSGT00940000158692 ENSGT00390000006913 ENSGT00940000161222 ENSGT00390000018141.i.a.b.b.b.a.b.b.b.b.b ENSGT01050000244940.b ENSGT00390000012979.w ENSGT00940000163109 ENSGT00940000155240.A ENSGT00940000157643 ENSGT00940000160401 ENSGT00940000159226 ENSGT00940000154837.f.a.b #22 ENSGT00940000158420 ENSGT00940000157502 ENSGT00950000182937.B.b ENSGT00390000007890 ENSGT00390000018424 ENSGT00390000009583 ENSGT00950000182824.a.a.a ENSGT00390000003526 ENSGT01050000244882.a.a.a.a ENSGT00940000160095 ENSGT00390000013286 ENSGT01100000263480.a.b.b.a.b.b.b.b.a.a.a.b.a.b ENSGT00940000154932.A ENSGT00940000161214 ENSGT00940000157309 Cow MODERN SPECIES 24 IFNG (ENSBTAG00000012529) DYRK2 (ENSBTAG00000007256) CAND1 (ENSBTAG00000009939) GRIP1 (ENSBTAG00000033726) HELB (ENSBTAG00000020806) ENSBTAG00000053419 IRAK3 (ENSBTAG00000007636) ENSBTAG00000052954 TMBIM4 (ENSBTAG00000026993) LLPH (ENSBTAG00000002004) HMGA2 (ENSBTAG00000044118) MSRB3 (ENSBTAG00000044017) LEMD3 (ENSBTAG00000039435) WIF1 (ENSBTAG00000014758) TBC1D30 (ENSBTAG00000011352) ENSBTAG00000000237 #22 GNS (ENSBTAG00000017465) RASSF3 (ENSBTAG00000051013) TBK1 (ENSBTAG00000017401) XPOT (ENSBTAG00000026962) C5H12orf56 (ENSBTAG00000018861) KICS2 (ENSBTAG00000013486) SRGAP1 (ENSBTAG00000011892) RXYLT1 (ENSBTAG00000004753) AVPR1A (ENSBTAG00000007175) PPM1H (ENSBTAG00000011857) MON2 (ENSBTAG00000011068) USP15 (ENSBTAG00000010428) ENSBTAG00000053892 TAFA2 (ENSBTAG00000047818) ENSBTAG00000040344 Hybrid Bos Indicus MODERN SPECIES 24 CAND1 (ENSBIXG00005008828) ENSBIXG00005008879 GRIP1 (ENSBIXG00005008977) HELB (ENSBIXG00005009036) ENSBIXG00005009040 IRAK3 (ENSBIXG00005000380) ENSBIXG00005009091 ENSBIXG00005009112 TMBIM4 (ENSBIXG00005000408) LLPH (ENSBIXG00005009186) HMGA2 (ENSBIXG00005009212) ENSBIXG00005000443 LEMD3 (ENSBIXG00005005365) WIF1 (ENSBIXG00005006309) ENSBIXG00005009335 ENSBIXG00005009340 #22 TBC1D30 (ENSBIXG00005000493) GNS (ENSBIXG00005009700) RASSF3 (ENSBIXG00005000572) TBK1 (ENSBIXG00005009791) ENSBIXG00005000612 C12orf56 (ENSBIXG00005009823) XPOT (ENSBIXG00005009939) KICS2 (ENSBIXG00005000724) ENSBIXG00005000730 ENSBIXG00005000741 ENSBIXG00005009993 SRGAP1 (ENSBIXG00005010054) RXYLT1 (ENSBIXG00005010094) AVPR1A (ENSBIXG00005010131) PPM1H (ENSBIXG00005010177) American bison MODERN SPECIES 3085 ENSBBBG00000012826 IL26 (ENSBBBG00000002489) IFNG (ENSBBBG00000012820) DYRK2 (ENSBBBG00000012816) CAND1 (ENSBBBG00000001779) GRIP1 (ENSBBBG00000002485) HELB (ENSBBBG00000012760) IRAK3 (ENSBBBG00000002462) TMBIM4 (ENSBBBG00000012720) LLPH (ENSBBBG00000012681) HMGA2 (ENSBBBG00000012674) MSRB3 (ENSBBBG00000012656) LEMD3 (ENSBBBG00000012575) WIF1 (ENSBBBG00000012556) TBC1D30 (ENSBBBG00000012542) ENSBBBG00000012528 #22 GNS (ENSBBBG00000002394) RASSF3 (ENSBBBG00000012446) TBK1 (ENSBBBG00000012433) XPOT (ENSBBBG00000012410) C12orf56 (ENSBBBG00000009048) KICS2 (ENSBBBG00000002345) SRGAP1 (ENSBBBG00000012364) RXYLT1 (ENSBBBG00000001916) AVPR1A (ENSBBBG00000012309) PPM1H (ENSBBBG00000012304) MON2 (ENSBBBG00000002321) USP15 (ENSBBBG00000012006) TAFA2 (ENSBBBG00000011972) ENSBBBG00000011964 ENSBBBG00000011958 Siberian musk deer MODERN SPECIES 1242 IL26 (ENSMMSG00000019041) IFNG (ENSMMSG00000019007) DYRK2 (ENSMMSG00000018984) CAND1 (ENSMMSG00000018923) GRIP1 (ENSMMSG00000018549) HELB (ENSMMSG00000018442) IRAK3 (ENSMMSG00000018347) TMBIM4 (ENSMMSG00000018268) LLPH (ENSMMSG00000018234) HMGA2 (ENSMMSG00000018204) MSRB3 (ENSMMSG00000018149) ENSMMSG00000018126 LEMD3 (ENSMMSG00000018031) WIF1 (ENSMMSG00000017944) TBC1D30 (ENSMMSG00000017850) ENSMMSG00000017824 #22 GNS (ENSMMSG00000017616) RASSF3 (ENSMMSG00000017582) TBK1 (ENSMMSG00000017508) XPOT (ENSMMSG00000017426) C12orf56 (ENSMMSG00000017286) KICS2 (ENSMMSG00000017241) ENSMMSG00000017217 ENSMMSG00000017187 SRGAP1 (ENSMMSG00000017138) RXYLT1 (ENSMMSG00000017107) AVPR1A (ENSMMSG00000017095) PPM1H (ENSMMSG00000017078) MON2 (ENSMMSG00000016822) ENSMMSG00000016678 ENSMMSG00000016643 Yarkand deer MODERN SPECIES 22 IFNG (ENSCHYG00000002762) DYRK2 (ENSCHYG00000002782) CAND1 (ENSCHYG00000002806) ENSCHYG00000002854 GRIP1 (ENSCHYG00000002912) HELB (ENSCHYG00000003149) IRAK3 (ENSCHYG00000003198) TMBIM4 (ENSCHYG00000003280) LLPH (ENSCHYG00000003345) HMGA2 (ENSCHYG00000003354) ENSCHYG00000003367 MSRB3 (ENSCHYG00000003388) LEMD3 (ENSCHYG00000003418) WIF1 (ENSCHYG00000003465) TBC1D30 (ENSCHYG00000003516) ENSCHYG00000003547 #22 GNS (ENSCHYG00000003576) RASSF3 (ENSCHYG00000003677) TBK1 (ENSCHYG00000003764) XPOT (ENSCHYG00000003835) C12orf56 (ENSCHYG00000003921) KICS2 (ENSCHYG00000003935) SRGAP1 (ENSCHYG00000003958) RXYLT1 (ENSCHYG00000003994) ENSCHYG00000004012 AVPR1A (ENSCHYG00000004018) PPM1H (ENSCHYG00000004040) ENSCHYG00000004062 ENSCHYG00000004070 ENSCHYG00000004079 MON2 (ENSCHYG00000004121) Pecora ANCESTRAL SPECIES ENSGT00940000154837.f.b #22 Percora_a ANCESTRAL SPECIES 163 ENSGT00940000159951.d.b ENSGT00940000154837.f.b #22 Siberian musk deer MODERN SPECIES 8 FAM133A (ENSMMSG00000008570) ENSMMSG00000008552 ENSMMSG00000008511 ENSMMSG00000008443 ENSMMSG00000008384 #22 DIAPH2 (ENSMMSG00000008282) ENSMMSG00000008253 ENSMMSG00000008230 ENSMMSG00000008218 ENSMMSG00000008202 PCDH19 (ENSMMSG00000008079) ENSMMSG00000008060 TNMD (ENSMMSG00000008036) TSPAN6 (ENSMMSG00000007947) SRPX2 (ENSMMSG00000007899) ENSMMSG00000007890 Bovidae ANCESTRAL SPECIES 154 ENSGT00940000159951.d.b.b.a ENSGT00940000154837.f.b #22 Caprinae ANCESTRAL SPECIES 38 ENSGT00940000162668 ENSGT00940000158335 ENSGT00390000012807.cb.b ENSGT00940000154837.f.b #22 ENSGT00940000157822 ENSGT00390000000378.d.b.gb ENSGT00390000001618.db ENSGT00390000000378.d.b.fb.a.a ENSGT00940000159162 ENSGT00480000042679.a ENSGT00940000159092.d ENSGT00940000159149 ENSGT00940000153412.A.a.d.c ENSGT00390000007539.i.b.b.i ENSGT00940000161990 ENSGT00940000162726 ENSGT00940000163081 ENSGT00940000160792 ENSGT01030000234531.A.a Rambouillet Sheep DUPLICATION Rambouillet Sheep MODERN SPECIES 205 PABPC5 (ENSOARG00020020062) ENSOARG00020020044 ENSOARG00020020016 ENSOARG00020019902 ENSOARG00020019580 FAM133A (ENSOARG00020019478) ENSOARG00020019414 #22 ENSOARG00020019388 #22 ENSOARG00020019268 DIAPH2 (ENSOARG00020019118) ENSOARG00020019085 ENSOARG00020019044 ENSOARG00020018987 ENSOARG00020018865 ENSOARG00020018799 ENSOARG00020018749 ENSOARG00020018729 ENSOARG00020018701 ENSOARG00020018677 PCDH19 (ENSOARG00020018564) TNMD (ENSOARG00020018483) TSPAN6 (ENSOARG00020018379) SRPX2 (ENSOARG00020018342) Rambouillet Sheep MODERN SPECIES 205 PABPC5 (ENSOARG00020020062) ENSOARG00020020044 ENSOARG00020020016 ENSOARG00020019902 ENSOARG00020019580 FAM133A (ENSOARG00020019478) ENSOARG00020019414 #22 ENSOARG00020019388 #22 ENSOARG00020019268 DIAPH2 (ENSOARG00020019118) ENSOARG00020019085 ENSOARG00020019044 ENSOARG00020018987 ENSOARG00020018865 ENSOARG00020018799 ENSOARG00020018749 ENSOARG00020018729 ENSOARG00020018701 ENSOARG00020018677 PCDH19 (ENSOARG00020018564) TNMD (ENSOARG00020018483) TSPAN6 (ENSOARG00020018379) Goat MODERN SPECIES 30 FAM133A (ENSCHIG00000020066) NAP1L3 (ENSCHIG00000020503) ENSCHIG00000018022 ENSCHIG00000015524 ENSCHIG00000012934 ENSCHIG00000008332 ENSCHIG00000009197 #22 ENSCHIG00000000445 ENSCHIG00000000411 ENSCHIG00000000375 ENSCHIG00000000344 ENSCHIG00000000308 ENSCHIG00000000275 ENSCHIG00000000236 ENSCHIG00000018890 TNMD (ENSCHIG00000000164) SRPX2 (ENSCHIG00000000098) ENSCHIG00000000063 ENSCHIG00000008561 ENSCHIG00000020751 ENSCHIG00000008681 GPRASP2 (ENSCHIG00000006797) Bovinae DUPLICATION Bovinae ANCESTRAL SPECIES ENSGT00940000154837.f.b.c #22 Bos ANCESTRAL SPECIES ENSGT00940000154837.f.b.c #22 Bos_a ANCESTRAL SPECIES ENSGT00940000154837.f.b.c #22 Wild yak MODERN SPECIES 2825 ENSBMUG00000023589 #22 Bovinae DUPLICATION Bovinae ANCESTRAL SPECIES ENSGT00940000154837.f.b.d.a #22 Bos ANCESTRAL SPECIES 36 ENSGT00940000161244 ENSGT00940000153412.B ENSGT01030000234531.A.a ENSGT00940000160792 ENSGT00940000163081 ENSGT00940000163396 ENSGT00940000162726 ENSGT00940000161990 ENSGT00530000063205.B.b ENSGT00390000007539.i.b.b.i ENSGT00940000153412.A.a.d ENSGT00940000159149 ENSGT00940000159092.d ENSGT00480000042679.a ENSGT00940000159162 ENSGT00940000154837.f.b.d.a #22 ENSGT00940000164266 ENSGT00940000157822 ENSGT00940000154837.f.b.d.b #22 ENSGT00940000159951.d.b.b.a.c.b ENSGT00730000111097.e ENSGT00940000158335 ENSGT00940000163888 ENSGT00940000162668 ENSGT00960000186859 ENSGT00410000025802.g.b ENSGT00530000063808.a ENSGT01100000263481.n.a.b.b.a.a.b.b ENSGT00530000063435.a ENSGT00950000183004.a.a.a.b ENSGT00950000182808.b.b Bos_a ANCESTRAL SPECIES 39 ENSGT00940000161244 ENSGT00940000153412.B ENSGT01030000234531.A.a ENSGT00940000160792 ENSGT00940000163081 ENSGT00940000163396 ENSGT00940000162726 ENSGT00940000161990 ENSGT00530000063205.B.b ENSGT00390000007539.i.b.b.i ENSGT00940000153412.A.a.d ENSGT00940000159149 ENSGT00940000159092.d ENSGT00480000042679.a ENSGT00940000159162 ENSGT00940000154837.f.b.d.a #22 ENSGT00940000157822 ENSGT00940000154837.f.b.d.b #22 ENSGT00940000159951.d.b.b.a.c.b ENSGT00730000111097.e ENSGT00940000158335 ENSGT00940000163888 ENSGT00940000162668 ENSGT00940000161825.v.a.a.a ENSGT00940000161825.v.a.b ENSGT00390000001700.a.b.b.a.b ENSGT00910000144363.g.a.a.a.a.a ENSGT00910000144363.g.a.a.a.a.b ENSGT00940000154891 ENSGT00410000025802.g.b ENSGT00530000063808.a Domestic yak MODERN SPECIES 69 ARMCX2 (ENSBGRG00000019252) ENSBGRG00000019145 ZMAT1 (ENSBGRG00000019010) ENSBGRG00000018983 ENSBGRG00000018949 ENSBGRG00000018831 ENSBGRG00000018782 GPRASP1 (ENSBGRG00000018689) ENSBGRG00000018423 ENSBGRG00000018300 ENSBGRG00000018278 SRPX2 (ENSBGRG00000018193) TSPAN6 (ENSBGRG00000017980) TNMD (ENSBGRG00000017871) PCDH19 (ENSBGRG00000017593) ENSBGRG00000017498 #22 ENSBGRG00000017475 DIAPH2 (ENSBGRG00000026395) ENSBGRG00000026389 #22 ENSBGRG00000026386 ENSBGRG00000026379 FAM133A (ENSBGRG00000026368) ENSBGRG00000026355 ENSBGRG00000026351 PABPC5 (ENSBGRG00000026348) ENSBGRG00000026345 #36 ENSBGRG00000026343 ENSBGRG00000026339 ENSBGRG00000026338 ENSBGRG00000026335 ENSBGRG00000026333 Wild yak MODERN SPECIES 1432 ENSBMUG00000025240 #22 Bos_b ANCESTRAL SPECIES 31 ENSGT00940000161244 ENSGT00940000153412.B ENSGT01030000234531.A.a ENSGT00940000160792 ENSGT00940000163081 ENSGT00940000163396 ENSGT00940000162726 ENSGT00940000161990 ENSGT00530000063205.B.b ENSGT00390000007539.i.b.b.i ENSGT00940000153412.A.a.d ENSGT00940000159149 ENSGT00940000159092.d ENSGT00480000042679.a ENSGT00940000159162 ENSGT00940000154837.f.b.d.a #22 ENSGT00950000182878.b.a.c.a.a.b.p.b.b.b ENSGT00940000165737 ENSGT00940000164848 ENSGT00940000164062 ENSGT00940000162232 ENSGT00940000164266 ENSGT00940000157822 ENSGT00940000154837.f.b.d.b.b #22 ENSGT00730000111097.e ENSGT00940000158335 ENSGT00940000163888 ENSGT00940000162668 ENSGT00960000192909 ENSGT00940000161825.v.a.a.a ENSGT00390000012182.i.a.b Hybrid Bos Indicus MODERN SPECIES 315 ZMAT1 (ENSBIXG00005015846) BEX5 (ENSBIXG00005015823) ENSBIXG00005015797 ENSBIXG00005015731 ARMCX5 (ENSBIXG00005015713) GPRASP2 (ENSBIXG00005015630) ENSBIXG00005015449 ENSBIXG00005015274 ENSBIXG00005015261 ENSBIXG00005015252 ENSBIXG00005002232 SRPX2 (ENSBIXG00005015161) TSPAN6 (ENSBIXG00005015120) TNMD (ENSBIXG00005015090) PCDH19 (ENSBIXG00005015067) ENSBIXG00005002199 #22 DIAPH2 (ENSBIXG00005014924) ENSBIXG00005014883 ENSBIXG00005007127 #22 ENSBIXG00005006377 #22 FAM133A (ENSBIXG00005014766) ENSBIXG00005005495 ENSBIXG00005014508 ENSBIXG00005014480 PABPC5 (ENSBIXG00005006433) ENSBIXG00005014439 ENSBIXG00005014423 ENSBIXG00005014407 ENSBIXG00005005973 ENSBIXG00005006735 ENSBIXG00005014316 Cow MODERN SPECIES 177 ZMAT1 (ENSBTAG00000003601) BEX5 (ENSBTAG00000014670) ENSBTAG00000027978 ENSBTAG00000020522 ARMCX5 (ENSBTAG00000010114) ENSBTAG00000047213 GPRASP2 (ENSBTAG00000032852) ENSBTAG00000046608 ENSBTAG00000048265 ENSBTAG00000022502 BEX2 (ENSBTAG00000032875) SRPX2 (ENSBTAG00000037686) TSPAN6 (ENSBTAG00000045550) TNMD (ENSBTAG00000021059) PCDH19 (ENSBTAG00000014169) ENSBTAG00000032923 #22 ENSBTAG00000016019 ENSBTAG00000005395 DIAPH2 (ENSBTAG00000050709) DIAPH2 (ENSBTAG00000038815) ENSBTAG00000048495 #22 ENSBTAG00000053993 #22 FAM133A (ENSBTAG00000011277) ENSBTAG00000001911 ENSBTAG00000051994 ENSBTAG00000033749 PABPC5 (ENSBTAG00000019942) ENSBTAG00000049694 ENSBTAG00000033445 ENSBTAG00000049844 ENSBTAG00000036343 Bovinae ANCESTRAL SPECIES 47 ENSGT00940000162668 ENSGT00940000163888 ENSGT00940000158335 ENSGT00730000111097.e ENSGT00940000159951.d.b.b.a ENSGT00940000154837.f.b.d.b #22 ENSGT00940000157822 ENSGT00940000164266 ENSGT00940000162232 ENSGT00940000164062 ENSGT00940000164848 ENSGT00940000159162 ENSGT00480000042679.a ENSGT00940000159092.d ENSGT00940000159149 ENSGT00940000153412.A.a.d ENSGT00390000007539.i.b.b.i ENSGT00940000161990 ENSGT00940000162726 ENSGT00940000163396 ENSGT00940000163081 Bos ANCESTRAL SPECIES 36 ENSGT01050000244850.A.a ENSGT00410000025802.g.a ENSGT00730000111022 ENSGT00950000182808.b.b ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT01100000263481.n.a.b.b.a.a.b.b ENSGT00530000063808.a ENSGT00410000025802.g.b ENSGT00960000186859 ENSGT00940000162668 ENSGT00940000163888 ENSGT00940000158335 ENSGT00730000111097.e ENSGT00940000159951.d.b.b.a.c.b ENSGT00940000154837.f.b.d.b #22 ENSGT00940000157822 ENSGT00940000164266 ENSGT00940000154837.f.b.d.a #22 ENSGT00940000159162 ENSGT00480000042679.a ENSGT00940000159092.d ENSGT00940000159149 ENSGT00940000153412.A.a.d ENSGT00390000007539.i.b.b.i ENSGT00530000063205.B.b ENSGT00940000161990 ENSGT00940000162726 ENSGT00940000163396 ENSGT00940000163081 ENSGT00940000160792 Bos_a ANCESTRAL SPECIES 39 ENSGT00530000063435.a ENSGT01100000263481.n.a.b.b.a.a.b.b ENSGT00530000063808.a ENSGT00410000025802.g.b ENSGT00940000154891 ENSGT00910000144363.g.a.a.a.a.b ENSGT00910000144363.g.a.a.a.a.a ENSGT00390000001700.a.b.b.a.b ENSGT00940000161825.v.a.b ENSGT00940000161825.v.a.a.a ENSGT00940000162668 ENSGT00940000163888 ENSGT00940000158335 ENSGT00730000111097.e ENSGT00940000159951.d.b.b.a.c.b ENSGT00940000154837.f.b.d.b #22 ENSGT00940000157822 ENSGT00940000154837.f.b.d.a #22 ENSGT00940000159162 ENSGT00480000042679.a ENSGT00940000159092.d ENSGT00940000159149 ENSGT00940000153412.A.a.d ENSGT00390000007539.i.b.b.i ENSGT00530000063205.B.b ENSGT00940000161990 ENSGT00940000162726 ENSGT00940000163396 ENSGT00940000163081 ENSGT00940000160792 ENSGT01030000234531.A.a Wild yak MODERN SPECIES 909 ENSBMUG00000003732 #22 DIAPH2 (ENSBMUG00000003844) Domestic yak MODERN SPECIES 69 ENSBGRG00000026327 ENSBGRG00000026328 ENSBGRG00000026332 ENSBGRG00000026333 ENSBGRG00000026335 ENSBGRG00000026338 ENSBGRG00000026339 ENSBGRG00000026343 ENSBGRG00000026345 #36 PABPC5 (ENSBGRG00000026348) ENSBGRG00000026351 ENSBGRG00000026355 FAM133A (ENSBGRG00000026368) ENSBGRG00000026379 ENSBGRG00000026386 ENSBGRG00000026389 #22 DIAPH2 (ENSBGRG00000026395) ENSBGRG00000017475 ENSBGRG00000017498 #22 PCDH19 (ENSBGRG00000017593) TNMD (ENSBGRG00000017871) TSPAN6 (ENSBGRG00000017980) SRPX2 (ENSBGRG00000018193) ENSBGRG00000018278 ENSBGRG00000018300 ENSBGRG00000018423 GPRASP1 (ENSBGRG00000018689) ENSBGRG00000018782 ENSBGRG00000018831 ENSBGRG00000018949 ENSBGRG00000018983 Bos_b DUPLICATION Bos_b ANCESTRAL SPECIES ENSGT00940000154837.f.b.d.b.a #22 Cow MODERN SPECIES 177 ENSBTAG00000053848 ENSBTAG00000052652 ENSBTAG00000049584 ENSBTAG00000054052 ENSBTAG00000048281 ENSBTAG00000049678 ENSBTAG00000036343 ENSBTAG00000049844 ENSBTAG00000033445 ENSBTAG00000049694 PABPC5 (ENSBTAG00000019942) ENSBTAG00000033749 ENSBTAG00000051994 ENSBTAG00000001911 FAM133A (ENSBTAG00000011277) ENSBTAG00000053993 #22 ENSBTAG00000048495 #22 DIAPH2 (ENSBTAG00000038815) DIAPH2 (ENSBTAG00000050709) ENSBTAG00000005395 ENSBTAG00000016019 ENSBTAG00000032923 #22 PCDH19 (ENSBTAG00000014169) TNMD (ENSBTAG00000021059) TSPAN6 (ENSBTAG00000045550) SRPX2 (ENSBTAG00000037686) BEX2 (ENSBTAG00000032875) ENSBTAG00000022502 ENSBTAG00000048265 ENSBTAG00000046608 GPRASP2 (ENSBTAG00000032852) Hybrid Bos Indicus MODERN SPECIES 315 ENSBIXG00005000250 ENSBIXG00005014255 ENSBIXG00005001881 ENSBIXG00005014316 ENSBIXG00005006735 ENSBIXG00005005973 ENSBIXG00005014407 ENSBIXG00005014423 ENSBIXG00005014439 PABPC5 (ENSBIXG00005006433) ENSBIXG00005014480 ENSBIXG00005014508 ENSBIXG00005005495 FAM133A (ENSBIXG00005014766) ENSBIXG00005006377 #22 ENSBIXG00005007127 #22 ENSBIXG00005014883 DIAPH2 (ENSBIXG00005014924) ENSBIXG00005002199 #22 PCDH19 (ENSBIXG00005015067) TNMD (ENSBIXG00005015090) TSPAN6 (ENSBIXG00005015120) SRPX2 (ENSBIXG00005015161) ENSBIXG00005002232 ENSBIXG00005015252 ENSBIXG00005015261 ENSBIXG00005015274 ENSBIXG00005015449 GPRASP2 (ENSBIXG00005015630) ARMCX5 (ENSBIXG00005015713) ENSBIXG00005015731 Bos_b ANCESTRAL SPECIES 31 ENSGT00530000063808.a ENSGT00940000160561.d.b ENSGT00410000025802.g.b ENSGT00960000186859 ENSGT00910000144363.g.a.a.a.a.b ENSGT00910000144363.g.a.a.a.a.a.a.a ENSGT00940000161825.v.a.b ENSGT00390000012182.i.a.a.b ENSGT00390000012182.i.a.b ENSGT00940000161825.v.a.a.a ENSGT00960000192909 ENSGT00940000162668 ENSGT00940000163888 ENSGT00940000158335 ENSGT00730000111097.e ENSGT00940000154837.f.b.d.b.b #22 ENSGT00940000157822 ENSGT00940000164266 ENSGT00940000162232 ENSGT00940000164062 ENSGT00940000164848 ENSGT00940000165737 ENSGT00950000182878.b.a.c.a.a.b.p.b.b.b ENSGT00940000154837.f.b.d.a #22 ENSGT00940000159162 ENSGT00480000042679.a ENSGT00940000159092.d ENSGT00940000159149 ENSGT00940000153412.A.a.d ENSGT00390000007539.i.b.b.i ENSGT00530000063205.B.b Cow MODERN SPECIES 177 ENSBTAG00000052652 ENSBTAG00000049584 ENSBTAG00000054052 ENSBTAG00000048281 ENSBTAG00000049678 ENSBTAG00000036343 ENSBTAG00000049844 ENSBTAG00000033445 ENSBTAG00000049694 PABPC5 (ENSBTAG00000019942) ENSBTAG00000033749 ENSBTAG00000051994 ENSBTAG00000001911 FAM133A (ENSBTAG00000011277) ENSBTAG00000053993 #22 ENSBTAG00000048495 #22 DIAPH2 (ENSBTAG00000038815) DIAPH2 (ENSBTAG00000050709) ENSBTAG00000005395 ENSBTAG00000016019 ENSBTAG00000032923 #22 PCDH19 (ENSBTAG00000014169) TNMD (ENSBTAG00000021059) TSPAN6 (ENSBTAG00000045550) SRPX2 (ENSBTAG00000037686) BEX2 (ENSBTAG00000032875) ENSBTAG00000022502 ENSBTAG00000048265 ENSBTAG00000046608 GPRASP2 (ENSBTAG00000032852) ENSBTAG00000047213 Hybrid Bos Indicus MODERN SPECIES 315 IKBKG (ENSBIXG00005014233) ENSBIXG00005000250 ENSBIXG00005014255 ENSBIXG00005001881 ENSBIXG00005014316 ENSBIXG00005006735 ENSBIXG00005005973 ENSBIXG00005014407 ENSBIXG00005014423 ENSBIXG00005014439 PABPC5 (ENSBIXG00005006433) ENSBIXG00005014480 ENSBIXG00005014508 ENSBIXG00005005495 FAM133A (ENSBIXG00005014766) ENSBIXG00005006377 #22 ENSBIXG00005007127 #22 ENSBIXG00005014883 DIAPH2 (ENSBIXG00005014924) ENSBIXG00005002199 #22 PCDH19 (ENSBIXG00005015067) TNMD (ENSBIXG00005015090) TSPAN6 (ENSBIXG00005015120) SRPX2 (ENSBIXG00005015161) ENSBIXG00005002232 ENSBIXG00005015252 ENSBIXG00005015261 ENSBIXG00005015274 ENSBIXG00005015449 GPRASP2 (ENSBIXG00005015630) ARMCX5 (ENSBIXG00005015713) American bison MODERN SPECIES 2685 ENSBBBG00000016864 #22 Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 1323 ALAS2 (ENSCHYG00000013150) ENSCHYG00000013116 ZNF81 (ENSCHYG00000013067) ZNF182 (ENSCHYG00000013010) ENSCHYG00000012978 ENSCHYG00000012946 SLC38A5 (ENSCHYG00000012767) ENSCHYG00000012549 PORCN (ENSCHYG00000012176) EBP (ENSCHYG00000012133) TBC1D25 (ENSCHYG00000012073) RBM3 (ENSCHYG00000011980) WDR13 (ENSCHYG00000011832) WAS (ENSCHYG00000011572) SUV39H1 (ENSCHYG00000011530) ENSCHYG00000011491 #22 GLOD5 (ENSCHYG00000011409) GATA1 (ENSCHYG00000011351) HDAC6 (ENSCHYG00000011007) ERAS (ENSCHYG00000010970) PCSK1N (ENSCHYG00000010927) ENSCHYG00000010894 TIMM17B (ENSCHYG00000010797) PQBP1 (ENSCHYG00000010724) SLC35A2 (ENSCHYG00000010376) PIM2 (ENSCHYG00000010311) OTUD5 (ENSCHYG00000010124) KCND1 (ENSCHYG00000010050) ENSCHYG00000009761 TFE3 (ENSCHYG00000009588) CCDC120 (ENSCHYG00000009246) Yarkand deer MODERN SPECIES 376 ENSCHYG00000019348 #22 Cetacea ANCESTRAL SPECIES 6 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00960000190798 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00390000012524.a.b ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00990000204193 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 ENSGT00390000001014 Odontoceti ANCESTRAL SPECIES 6 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00960000190798 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00390000012524.a.b ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041.h.a #29 ENSGT00990000204193 ENSGT00940000156041.g #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 Odontoceti_a ANCESTRAL SPECIES 7 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00390000012524.a.b ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041.h.a #29 ENSGT00990000204193 ENSGT00940000156041.g #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370.i #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 Odontoceti_b ANCESTRAL SPECIES 5 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00390000012524.a.b ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B.bb #27 ENSGT00390000013367 #28 ENSGT00940000156041.h.a #29 ENSGT00990000204193 ENSGT00940000156041.g #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370.i #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 Monodontidae ANCESTRAL SPECIES 3 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00390000012524.a.b ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B.bb #27 ENSGT00390000013367 #28 ENSGT00940000156041.h.a #29 ENSGT00990000204193 ENSGT00940000156041.g #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370.i #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 Narwhal MODERN SPECIES 296 SALL1 (ENSMMNG00015009605) CYLD (ENSMMNG00015009618) #8 NOD2 (ENSMMNG00015009637) #9 SNX20 (ENSMMNG00015009652) #10 NKD1 (ENSMMNG00015009664) #11 BRD7 (ENSMMNG00015009678) #12 ADCY7 (ENSMMNG00015009697) #13 TENT4B (ENSMMNG00015009736) #14 HEATR3 (ENSMMNG00015009780) #15 CNEP1R1 (ENSMMNG00015009819) #16 ZNF423 (ENSMMNG00015009834) #18 C16orf78 (ENSMMNG00015009847) #19 CBLN1 (ENSMMNG00015009855) #20 ENSMMNG00015009863 N4BP1 (ENSMMNG00015009871) #21 SIAH1 (ENSMMNG00015000049) #22 LONP2 (ENSMMNG00015000143) #23 ENSMMNG00015000198 #24 ABCC12 (ENSMMNG00015000285) #25 ENSMMNG00015000546 #27 ITFG1 (ENSMMNG00015000673) #28 NETO2 (ENSMMNG00015000741) #29 DNAJA2 (ENSMMNG00015000782) #31 GPT2 (ENSMMNG00015000815) #32 C16orf87 (ENSMMNG00015000869) #33 MYLK3 (ENSMMNG00015000932) #34 ENSMMNG00015001005 #35 VPS35 (ENSMMNG00015001063) #36 SHCBP1 (ENSMMNG00015001117) #37 UQCRFS1 (ENSMMNG00015001165) VSTM2B (ENSMMNG00015001182) Beluga whale MODERN SPECIES 3 SALL1 (ENSDLEG00000004477) CYLD (ENSDLEG00000004470) #8 NOD2 (ENSDLEG00000004464) #9 SNX20 (ENSDLEG00000004455) #10 NKD1 (ENSDLEG00000004447) #11 BRD7 (ENSDLEG00000004432) #12 ADCY7 (ENSDLEG00000004403) #13 TENT4B (ENSDLEG00000004389) #14 HEATR3 (ENSDLEG00000004380) #15 CNEP1R1 (ENSDLEG00000004375) #16 ZNF423 (ENSDLEG00000004357) #18 C16orf78 (ENSDLEG00000004349) #19 CBLN1 (ENSDLEG00000004341) #20 ENSDLEG00000004338 N4BP1 (ENSDLEG00000004331) #21 SIAH1 (ENSDLEG00000004325) #22 LONP2 (ENSDLEG00000004298) #23 ENSDLEG00000004257 #25 ENSDLEG00000004254 PHKB (ENSDLEG00000003990) #27 ITFG1 (ENSDLEG00000003922) #28 NETO2 (ENSDLEG00000003917) #29 ENSDLEG00000003914 DNAJA2 (ENSDLEG00000003905) #31 GPT2 (ENSDLEG00000003886) #32 CUNH16orf87 (ENSDLEG00000003869) #33 MYLK3 (ENSDLEG00000003839) #34 ENSDLEG00000003816 #35 VPS35 (ENSDLEG00000003791) #36 SHCBP1 (ENSDLEG00000003776) #37 Vaquita MODERN SPECIES 10 SALL1 (ENSPSNG00000015573) CYLD (ENSPSNG00000015466) #8 NOD2 (ENSPSNG00000015318) #9 SNX20 (ENSPSNG00000015147) #10 NKD1 (ENSPSNG00000015073) #11 BRD7 (ENSPSNG00000014996) #12 ENSPSNG00000014944 #13 TENT4B (ENSPSNG00000014186) #14 HEATR3 (ENSPSNG00000014045) #15 CNEP1R1 (ENSPSNG00000013955) #16 ZNF423 (ENSPSNG00000013840) #18 C16orf78 (ENSPSNG00000013755) #19 CBLN1 (ENSPSNG00000013689) #20 ENSPSNG00000013659 N4BP1 (ENSPSNG00000013602) #21 SIAH1 (ENSPSNG00000013519) #22 LONP2 (ENSPSNG00000013371) #23 ENSPSNG00000013246 #25 ENSPSNG00000013216 PHKB (ENSPSNG00000013066) #27 ITFG1 (ENSPSNG00000021338) #28 NETO2 (ENSPSNG00000021319) #29 ENSPSNG00000021303 DNAJA2 (ENSPSNG00000021284) #31 GPT2 (ENSPSNG00000021261) #32 C16orf87 (ENSPSNG00000021234) #33 MYLK3 (ENSPSNG00000021168) #34 ENSPSNG00000021135 #35 VPS35 (ENSPSNG00000021085) #36 SHCBP1 (ENSPSNG00000021057) #37 UQCRFS1 (ENSPSNG00000021044) Sperm whale MODERN SPECIES 8 TOX3 (ENSPCTG00005011262) ENSPCTG00005011229 #7 CYLD (ENSPCTG00005011098) #8 SNX20 (ENSPCTG00005010956) #10 NKD1 (ENSPCTG00005010867) #11 BRD7 (ENSPCTG00005010758) #12 ADCY7 (ENSPCTG00005010652) #13 TENT4B (ENSPCTG00005010555) #14 ENSPCTG00005010513 HEATR3 (ENSPCTG00005010371) #15 CNEP1R1 (ENSPCTG00005010290) #16 ZNF423 (ENSPCTG00005010161) #18 C17H16orf78 (ENSPCTG00005010092) #19 CBLN1 (ENSPCTG00005010053) #20 N4BP1 (ENSPCTG00005009990) #21 SIAH1 (ENSPCTG00005009946) #22 LONP2 (ENSPCTG00005009803) #23 ENSPCTG00005009733 #24 ENSPCTG00005009613 #25 PHKB (ENSPCTG00005009489) #27 ITFG1 (ENSPCTG00005009263) #28 ENSPCTG00005009015 #29 ENSPCTG00005008968 DNAJA2 (ENSPCTG00005018810) #31 GPT2 (ENSPCTG00005018753) #32 C16orf87 (ENSPCTG00005018678) #33 ORC6 (ENSPCTG00005018581) #35 MYLK3 (ENSPCTG00005018229) #36 SHCBP1 (ENSPCTG00005018139) #37 ENSPCTG00005018116 ENSPCTG00005018104 Blue whale MODERN SPECIES 10 SNX20 (ENSBMSG00010015078) #10 NKD1 (ENSBMSG00010015016) #11 ENSBMSG00010014986 BRD7 (ENSBMSG00010014944) #12 ADCY7 (ENSBMSG00010014515) #13 TENT4B (ENSBMSG00010014342) #14 ENSBMSG00010014321 HEATR3 (ENSBMSG00010014266) #15 CNEP1R1 (ENSBMSG00010014215) #16 ENSBMSG00010014176 ZNF423 (ENSBMSG00010019661) #18 C16orf78 (ENSBMSG00010019643) #19 CBLN1 (ENSBMSG00010019622) #20 ENSBMSG00010019615 N4BP1 (ENSBMSG00010019590) #21 SIAH1 (ENSBMSG00010019562) #22 LONP2 (ENSBMSG00010019517) #23 ENSBMSG00010019474 #25 PHKB (ENSBMSG00010019329) #27 ITFG1 (ENSBMSG00010019268) #28 NETO2 (ENSBMSG00010019202) #29 ENSBMSG00010019175 DNAJA2 (ENSBMSG00010019149) #31 GPT2 (ENSBMSG00010019103) #32 C16orf87 (ENSBMSG00010019068) #33 MYLK3 (ENSBMSG00010018990) #34 ORC6 (ENSBMSG00010018899) #35 VPS35 (ENSBMSG00010018847) #36 ENSBMSG00010018825 SHCBP1 (ENSBMSG00010018800) #37 UQCRFS1 (ENSBMSG00010018781) Laurasiatheria_b ANCESTRAL SPECIES 5 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00960000190798 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00990000204193 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 ENSGT00390000001014 Carnivora ANCESTRAL SPECIES 2 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00960000190798 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00990000204193 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 ENSGT00390000001014 Felidae DUPLICATION Felidae ANCESTRAL SPECIES 7 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00960000190798 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f.c #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00990000204193 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 ENSGT00390000001014 Panthera ANCESTRAL SPECIES 10 ENSGT00940000155938.j ENSGT00940000155938.i ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f.c #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00990000204193 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 ENSGT00390000001014.b Tiger MODERN SPECIES 547 ENSPTIG00000013539 ENSPTIG00000002799 CYLD (ENSPTIG00000014633) #8 NOD2 (ENSPTIG00000007371) #9 SNX20 (ENSPTIG00000009177) #10 NKD1 (ENSPTIG00000010677) #11 BRD7 (ENSPTIG00000011411) #12 ADCY7 (ENSPTIG00000014532) #13 ENSPTIG00000020374 #14 HEATR3 (ENSPTIG00000020656) #15 CNEP1R1 (ENSPTIG00000005471) #16 ZNF423 (ENSPTIG00000008348) #18 C16orf78 (ENSPTIG00000012056) #19 CBLN1 (ENSPTIG00000012479) #20 N4BP1 (ENSPTIG00000013078) #21 SIAH1 (ENSPTIG00000013734) #22 LONP2 (ENSPTIG00000013959) #23 ABCC11 (ENSPTIG00000016229) #24 ABCC12 (ENSPTIG00000019872) #25 PHKB (ENSPTIG00000021444) #27 ITFG1 (ENSPTIG00000007464) #28 NETO2 (ENSPTIG00000009224) #29 DNAJA2 (ENSPTIG00000011350) #31 GPT2 (ENSPTIG00000011669) #32 C16orf87 (ENSPTIG00000012961) #33 ENSPTIG00000013190 #34 ORC6 (ENSPTIG00000013837) #35 VPS35 (ENSPTIG00000014402) #36 SHCBP1 (ENSPTIG00000015014) #37 UQCRFS1 (ENSPTIG00000016425) POP4 (ENSPTIG00000016598) Panthera_a ANCESTRAL SPECIES 8 ENSGT00940000158043 ENSGT00940000155938.i ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f.c #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00990000204193 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 ENSGT00390000001014.b lion MODERN SPECIES 15 TOX3 (ENSPLOG00000006207) SALL1 (ENSPLOG00000006158) CYLD (ENSPLOG00000005966) #8 NOD2 (ENSPLOG00000005838) #9 SNX20 (ENSPLOG00000005801) #10 NKD1 (ENSPLOG00000005679) #11 BRD7 (ENSPLOG00000005652) #12 ADCY7 (ENSPLOG00000005432) #13 TENT4B (ENSPLOG00000015102) #14 HEATR3 (ENSPLOG00000015035) #15 CNEP1R1 (ENSPLOG00000014960) #16 ZNF423 (ENSPLOG00000014807) #18 C16orf78 (ENSPLOG00000014751) #19 CBLN1 (ENSPLOG00000014707) #20 N4BP1 (ENSPLOG00000014675) #21 ENSPLOG00000014631 #22 LONP2 (ENSPLOG00000014544) #23 ABCC11 (ENSPLOG00000013941) #24 ABCC12 (ENSPLOG00000013608) #25 PHKB (ENSPLOG00000013220) #27 ITFG1 (ENSPLOG00000012963) #28 NETO2 (ENSPLOG00000012794) #29 ENSPLOG00000012756 DNAJA2 (ENSPLOG00000012673) #31 GPT2 (ENSPLOG00000012599) #32 ENSPLOG00000012572 C16orf87 (ENSPLOG00000012519) #33 MYLK3 (ENSPLOG00000012295) #34 ORC6 (ENSPLOG00000012223) #35 VPS35 (ENSPLOG00000012152) #36 SHCBP1 (ENSPLOG00000012099) #37 leopard MODERN SPECIES 28 ENSPPRG00000023231 SALL1 (ENSPPRG00000023283) CYLD (ENSPPRG00000023533) #8 NOD2 (ENSPPRG00000024296) #9 SNX20 (ENSPPRG00000024487) #10 NKD1 (ENSPPRG00000024626) #11 BRD7 (ENSPPRG00000024677) #12 ADCY7 (ENSPPRG00000024790) #13 TENT4B (ENSPPRG00000024986) #14 HEATR3 (ENSPPRG00000025034) #15 CNEP1R1 (ENSPPRG00000021139) #16 ZNF423 (ENSPPRG00000019601) #18 C16orf78 (ENSPPRG00000016709) #19 CBLN1 (ENSPPRG00000016053) #20 N4BP1 (ENSPPRG00000014683) #21 ENSPPRG00000014448 #22 LONP2 (ENSPPRG00000013784) #23 ABCC11 (ENSPPRG00000013105) #24 ABCC12 (ENSPPRG00000011869) #25 PHKB (ENSPPRG00000010511) #27 ITFG1 (ENSPPRG00000008702) #28 NETO2 (ENSPPRG00000008404) #29 DNAJA2 (ENSPPRG00000008142) #31 GPT2 (ENSPPRG00000008061) #32 ENSPPRG00000007490 C16orf87 (ENSPPRG00000007067) #33 ENSPPRG00000006605 #34 ORC6 (ENSPPRG00000006469) #35 VPS35 (ENSPPRG00000006061) #36 SHCBP1 (ENSPPRG00000005919) #37 Cat MODERN SPECIES 246 NOD2 (ENSFCAG00000008505) #9 SNX20 (ENSFCAG00000008504) #10 NKD1 (ENSFCAG00000045078) #11 BRD7 (ENSFCAG00000009072) #12 ADCY7 (ENSFCAG00000029424) #13 ENSFCAG00000043056 TENT4B (ENSFCAG00000018796) #14 ENSFCAG00000052869 HEATR3 (ENSFCAG00000007212) #15 CNEP1R1 (ENSFCAG00000023936) #16 ENSFCAG00000053653 ZNF423 (ENSFCAG00000012158) #18 C16orf78 (ENSFCAG00000042254) #19 CBLN1 (ENSFCAG00000028536) #20 N4BP1 (ENSFCAG00000025750) #21 ENSFCAG00000011336 #22 LONP2 (ENSFCAG00000005281) #23 ABCC11 (ENSFCAG00000005280) #24 ABCC12 (ENSFCAG00000005279) #25 ENSFCAG00000052800 PHKB (ENSFCAG00000008580) #27 ITFG1 (ENSFCAG00000008579) #28 NETO2 (ENSFCAG00000044763) #29 ENSFCAG00000052656 DNAJA2 (ENSFCAG00000026439) #31 GPT2 (ENSFCAG00000001642) #32 ENSFCAG00000038831 ENSFCAG00000042208 #33 MYLK3 (ENSFCAG00000001388) #34 ORC6 (ENSFCAG00000024275) #35 VPS35 (ENSFCAG00000001383) #36 Felidae ANCESTRAL SPECIES ENSGT00940000154837.f.d #22 Panthera ANCESTRAL SPECIES 41 ENSGT00390000009885 ENSGT00390000016713 ENSGT00940000157160 ENSGT00940000160592 ENSGT00390000014405 ENSGT00940000159726 ENSGT00390000008044 ENSGT00940000161172 ENSGT00940000158077 ENSGT00940000160862 ENSGT00940000156978 ENSGT00950000183152.A.u ENSGT00970000193372.a.a ENSGT01100000263512.b.b.a ENSGT00940000159951 ENSGT00940000154837.f.d #22 ENSGT00940000166998 ENSGT00910000144179.b.a ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 ENSGT00510000046986.v.b.b.b ENSGT00540000073670 ENSGT01000000221142 ENSGT00950000182963.b.a ENSGT00940000154164.d ENSGT00940000159407 ENSGT00940000157355 ENSGT01090000260070.A Panthera_a ANCESTRAL SPECIES 40 ENSGT00390000009885 ENSGT00390000016713 ENSGT00940000157160 ENSGT00940000160592 ENSGT00390000014405 ENSGT00940000159726 ENSGT00390000008044 ENSGT00940000161172 ENSGT00940000158077 ENSGT00940000160862 ENSGT00940000156978 ENSGT00950000183152.A.u ENSGT00970000193372.a.a ENSGT01100000263512.b.b.a ENSGT00940000159951 ENSGT00940000154837.f.d #22 ENSGT00910000144179.b.a ENSGT00530000064238 ENSGT00390000007662 ENSGT00940000155463 ENSGT00940000154748.C ENSGT00940000158080 ENSGT00510000046986.v.b.b.b ENSGT00540000073670 ENSGT01000000221142 ENSGT00950000182963.b.a ENSGT00940000154164.d ENSGT00940000159407 ENSGT00940000157355 ENSGT00940000161181 ENSGT00940000159830 leopard MODERN SPECIES 71 MOSPD2 (ENSPPRG00000005327) ASB9 (ENSPPRG00000003789) ASB11 (ENSPPRG00000002632) PIGA (ENSPPRG00000002288) VEGFD (ENSPPRG00000001248) PIR (ENSPPRG00000000909) BMX (ENSPPRG00000000706) ACE2 (ENSPPRG00000018844) CLTRN (ENSPPRG00000018350) ENSPPRG00000018116 ENSPPRG00000018098 ENSPPRG00000016585 AP1S2 (ENSPPRG00000015703) GRPR (ENSPPRG00000014895) ENSPPRG00000016195 ENSPPRG00000016178 #22 CTPS2 (ENSPPRG00000013806) S100G (ENSPPRG00000013343) SYAP1 (ENSPPRG00000013173) TXLNG (ENSPPRG00000012775) RBBP7 (ENSPPRG00000011905) REPS2 (ENSPPRG00000011134) ENSPPRG00000011025 ENSPPRG00000010496 NHS (ENSPPRG00000010237) lion MODERN SPECIES 88 FANCB (ENSPLOG00000022169) MOSPD2 (ENSPLOG00000022201) ASB9 (ENSPLOG00000022246) ASB11 (ENSPLOG00000022279) PIGA (ENSPLOG00000022309) VEGFD (ENSPLOG00000022326) PIR (ENSPLOG00000022347) BMX (ENSPLOG00000022373) ACE2 (ENSPLOG00000022387) CLTRN (ENSPLOG00000022406) CA5B (ENSPLOG00000014458) ENSPLOG00000014586 AP1S2 (ENSPLOG00000014728) GRPR (ENSPLOG00000014837) ENSPLOG00000014885 ENSPLOG00000014899 #22 CTPS2 (ENSPLOG00000014974) S100G (ENSPLOG00000015030) SYAP1 (ENSPLOG00000015066) TXLNG (ENSPLOG00000015204) RBBP7 (ENSPLOG00000015390) REPS2 (ENSPLOG00000015573) ENSPLOG00000015930 ENSPLOG00000015961 NHS (ENSPLOG00000016019) RAI2 (ENSPLOG00000016300) SCML2 (ENSPLOG00000016350) CDKL5 (ENSPLOG00000016436) ENSPLOG00000016465 RS1 (ENSPLOG00000016497) PPEF1 (ENSPLOG00000016638) Cat MODERN SPECIES 252 FANCB (ENSFCAG00000029176) MOSPD2 (ENSFCAG00000022388) ENSFCAG00000047752 ASB9 (ENSFCAG00000010484) ASB11 (ENSFCAG00000022236) PIGA (ENSFCAG00000010727) PIR (ENSFCAG00000010486) BMX (ENSFCAG00000010487) ACE2 (ENSFCAG00000009320) CLTRN (ENSFCAG00000036385) CA5B (ENSFCAG00000031216) AP1S2 (ENSFCAG00000045977) GRPR (ENSFCAG00000001733) ENSFCAG00000040841 ENSFCAG00000033472 ENSFCAG00000013713 #22 CTPS2 (ENSFCAG00000006519) S100G (ENSFCAG00000042272) SYAP1 (ENSFCAG00000031081) TXLNG (ENSFCAG00000006523) RBBP7 (ENSFCAG00000028919) REPS2 (ENSFCAG00000006527) ENSFCAG00000052354 NHS (ENSFCAG00000000186) ENSFCAG00000043428 ENSFCAG00000047052 ENSFCAG00000053338 SCML2 (ENSFCAG00000006438) CDKL5 (ENSFCAG00000001075) ENSFCAG00000026145 RS1 (ENSFCAG00000037717) Caniformia ANCESTRAL SPECIES 1 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00960000190798 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00990000204193 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 ENSGT00390000001014 Canidae ANCESTRAL SPECIES 14 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00960000190798 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00990000204193 ENSGT00940000154688.b #31 ENSGT00940000161580 ENSGT00940000160840 ENSGT00950000182858.C ENSGT00940000156275 ENSGT00940000158433 ENSGT00950000182995.e.a.a.b ENSGT00940000154576 Canis_lupus ANCESTRAL SPECIES 6 ENSGT00940000168933 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00960000190798 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000161580 ENSGT00940000160840 ENSGT00950000182858.C ENSGT00940000156275 ENSGT00940000158433 ENSGT00950000182995.e.a.a.b ENSGT00940000154576 ENSGT00940000158451 Dingo MODERN SPECIES 41 ENSCAFG00020002827 CYLD (ENSCAFG00020001785) #8 NOD2 (ENSCAFG00020001497) #9 SNX20 (ENSCAFG00020001482) #10 NKD1 (ENSCAFG00020001437) #11 BRD7 (ENSCAFG00020001425) #12 ADCY7 (ENSCAFG00020001134) #13 TENT4B (ENSCAFG00020000987) #14 ENSCAFG00020000975 HEATR3 (ENSCAFG00020000624) #15 CNEP1R1 (ENSCAFG00020000556) #16 ZNF423 (ENSCAFG00020000541) #18 C16orf78 (ENSCAFG00020000518) #19 CBLN1 (ENSCAFG00020000480) #20 N4BP1 (ENSCAFG00020000467) #21 SIAH1 (ENSCAFG00020000454) #22 LONP2 (ENSCAFG00020000441) #23 ABCC11 (ENSCAFG00020000152) #24 ABCC12 (ENSCAFG00020025500) #25 ENSCAFG00020025471 #27 ENSCAFG00020025463 #27 ITFG1 (ENSCAFG00020025448) #28 NETO2 (ENSCAFG00020025433) #29 ENSCAFG00020025431 #31 ENSCAFG00020025427 #31 ZSCAN20 (ENSCAFG00020025424) PHC2 (ENSCAFG00020025412) A3GALT2 (ENSCAFG00020025408) ZNF362 (ENSCAFG00020025405) ENSCAFG00020025403 TRIM62 (ENSCAFG00020025401) Dog MODERN SPECIES 11 SNX20 (ENSCAFG00845003924) #10 NKD1 (ENSCAFG00845003953) #11 BRD7 (ENSCAFG00845003994) #12 ADCY7 (ENSCAFG00845004089) #13 TENT4B (ENSCAFG00845004208) #14 HEATR3 (ENSCAFG00845004241) #15 ENSCAFG00845004273 CNEP1R1 (ENSCAFG00845004308) #16 ENSCAFG00845004320 ENSCAFG00845004326 ZNF423 (ENSCAFG00845004378) #18 C2H16orf78 (ENSCAFG00845004423) #19 CBLN1 (ENSCAFG00845004446) #20 ENSCAFG00845004454 N4BP1 (ENSCAFG00845004469) #21 SIAH1 (ENSCAFG00845004556) #22 LONP2 (ENSCAFG00845004588) #23 ABCC11 (ENSCAFG00845004630) #24 ABCC12 (ENSCAFG00845004726) #25 PHKB (ENSCAFG00845004803) #27 ITFG1 (ENSCAFG00845004881) #28 NETO2 (ENSCAFG00845004942) #29 ENSCAFG00845004970 #31 ENSCAFG00845004991 PHC2 (ENSCAFG00845005005) A3GALT2 (ENSCAFG00845005027) ZNF362 (ENSCAFG00845005042) TRIM62 (ENSCAFG00845005051) AZIN2 (ENSCAFG00845005076) AK2 (ENSCAFG00845005127) RNF19B (ENSCAFG00845005205) Red fox MODERN SPECIES 103 SIAH1 (ENSVVUG00000016148) #22 LONP2 (ENSVVUG00000016144) #23 ABCC11 (ENSVVUG00000016112) #24 ABCC12 (ENSVVUG00000016011) #25 PHKB (ENSVVUG00000015938) #27 ITFG1 (ENSVVUG00000015901) #28 NETO2 (ENSVVUG00000015867) #29 ENSVVUG00000015855 DNAJA2 (ENSVVUG00000015609) #31 ZSCAN20 (ENSVVUG00000015598) PHC2 (ENSVVUG00000015581) ZNF362 (ENSVVUG00000015569) TRIM62 (ENSVVUG00000015555) AZIN2 (ENSVVUG00000015543) AK2 (ENSVVUG00000015537) RNF19B (ENSVVUG00000015500) Caniformia_b ANCESTRAL SPECIES 2 ENSGT00940000155938.i ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 ENSGT00390000001014.d ENSGT00940000161356 Ursidae DUPLICATION Ursidae ANCESTRAL SPECIES 8 ENSGT00940000155938.i ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f.e #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 ENSGT00390000001014.d ENSGT00940000161356 Ursus ANCESTRAL SPECIES 26 ENSGT00940000155938.i ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529.g #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f.e #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 ENSGT00390000001014.d ENSGT00940000161356 American black bear MODERN SPECIES 8967 ENSUAMG00000002539 #22 Polar bear MODERN SPECIES 246 ENSUMAG00000005357 CYLD (ENSUMAG00000005408) #8 NOD2 (ENSUMAG00000005890) #9 ENSUMAG00000005926 #10 NKD1 (ENSUMAG00000005931) #11 BRD7 (ENSUMAG00000005986) #12 ADCY7 (ENSUMAG00000006160) #13 TENT4B (ENSUMAG00000006309) #14 HEATR3 (ENSUMAG00000006385) #15 CNEP1R1 (ENSUMAG00000006630) #16 ENSUMAG00000006646 ENSUMAG00000006664 #18 ENSUMAG00000006675 #19 CBLN1 (ENSUMAG00000006680) #20 N4BP1 (ENSUMAG00000006688) #21 ENSUMAG00000006693 #22 LONP2 (ENSUMAG00000006716) #23 ABCC11 (ENSUMAG00000007046) #24 ABCC12 (ENSUMAG00000007107) #25 PHKB (ENSUMAG00000007207) #27 ITFG1 (ENSUMAG00000007275) #28 NETO2 (ENSUMAG00000007445) #29 DNAJA2 (ENSUMAG00000007456) #31 GPT2 (ENSUMAG00000007464) #32 C16orf87 (ENSUMAG00000007482) #33 MYLK3 (ENSUMAG00000007489) #34 ORC6 (ENSUMAG00000007497) #35 VPS35 (ENSUMAG00000007502) #36 SHCBP1 (ENSUMAG00000007514) #37 UQCRFS1 (ENSUMAG00000007517) ENSUMAG00000007522 Giant Panda MODERN SPECIES 3 SALL1 (ENSAMEG00000025292) CYLD (ENSAMEG00000006757) #8 NOD2 (ENSAMEG00000006741) #9 SNX20 (ENSAMEG00000024024) #10 ENSAMEG00000006721 #11 BRD7 (ENSAMEG00000006689) #12 ADCY7 (ENSAMEG00000006564) #13 TENT4B (ENSAMEG00000006535) #14 HEATR3 (ENSAMEG00000006493) #15 CNEP1R1 (ENSAMEG00000006491) #16 ENSAMEG00000006486 ZNF423 (ENSAMEG00000006481) #18 C16orf78 (ENSAMEG00000006474) #19 CBLN1 (ENSAMEG00000006468) #20 N4BP1 (ENSAMEG00000010288) #21 ENSAMEG00000010284 #22 LONP2 (ENSAMEG00000010282) #23 ABCC11 (ENSAMEG00000004329) #24 ABCC12 (ENSAMEG00000006218) #25 ENSAMEG00000026895 #27 ENSAMEG00000015093 #27 ITFG1 (ENSAMEG00000004849) #28 NETO2 (ENSAMEG00000004857) #29 DNAJA2 (ENSAMEG00000004874) #31 GPT2 (ENSAMEG00000004904) #32 C16orf87 (ENSAMEG00000000887) #33 MYLK3 (ENSAMEG00000000866) #34 ORC6 (ENSAMEG00000018347) #35 ENSAMEG00000018344 #36 ENSAMEG00000018332 #37 ENSAMEG00000018330 Ursidae ANCESTRAL SPECIES 28 ENSGT00390000013608 ENSGT00390000006915.c.c.b.x ENSGT00390000006915.c.c.b.w.a ENSGT00390000001798 ENSGT01010000222530 ENSGT00510000047168 ENSGT00940000158619 ENSGT00940000162067 ENSGT00930000150973.A ENSGT00960000187246 ENSGT00940000154433.a.b ENSGT00940000160879 ENSGT00940000159771 ENSGT00950000182803.B.d.b.d.b ENSGT00950000183035.a.b.a ENSGT00940000154837.f.f #22 ENSGT00950000182965.b ENSGT00390000009151.m ENSGT00940000153904.a ENSGT00390000004175 ENSGT00940000155821.k.a ENSGT00940000158265 ENSGT00410000025556.a.b ENSGT00390000005717 ENSGT00520000056155 ENSGT00940000155212 ENSGT00390000016722.m ENSGT00940000153421.a.a.a.a.b ENSGT00440000033720.a ENSGT00940000162022 ENSGT00940000161153 Ursus ANCESTRAL SPECIES 148 ENSGT00390000009885 ENSGT01090000263445 ENSGT00940000158730 ENSGT00390000013608 ENSGT00390000006915.c.c.b.x ENSGT00390000006915.c.c.b.w.a ENSGT00390000001798 ENSGT01010000222530 ENSGT00940000158619.m ENSGT00940000162067 ENSGT00930000150973.A ENSGT00940000160879 ENSGT00940000159771 ENSGT00950000182803.B.d.b.d.b ENSGT00950000183035.a.b.a ENSGT00940000154837.f.f #22 ENSGT00950000182965.b ENSGT00390000009151.m ENSGT00940000153904.a ENSGT00390000004175 ENSGT00940000155821.k.a ENSGT00940000158265 ENSGT00410000025556.a.b ENSGT00390000005717 American black bear MODERN SPECIES 8786 ENSUAMG00000004158 #22 Polar bear MODERN SPECIES 198 ENSUMAG00000005590 ENSUMAG00000005578 GLRA2 (ENSUMAG00000005489) GEMIN8 (ENSUMAG00000005467) ENSUMAG00000005464 OFD1 (ENSUMAG00000005363) ENSUMAG00000005354 ENSUMAG00000005348 TCEANC (ENSUMAG00000005344) EGFL6 (ENSUMAG00000005330) ENSUMAG00000005319 TLR8 (ENSUMAG00000005307) TLR7 (ENSUMAG00000005306) PRPS2 (ENSUMAG00000005206) FRMPD4 (ENSUMAG00000005131) ENSUMAG00000005120 #22 MSL3 (ENSUMAG00000005111) AMELX (ENSUMAG00000005104) ARHGAP6 (ENSUMAG00000005091) HCCS (ENSUMAG00000005085) MID1 (ENSUMAG00000005077) ENSUMAG00000005053 WWC3 (ENSUMAG00000004920) ENSUMAG00000004899 Giant Panda DUPLICATION Giant Panda MODERN SPECIES 2165 ENSAMEG00000024669 #22 Giant Panda MODERN SPECIES 2288 MOSPD2 (ENSAMEG00000006343) FANCB (ENSAMEG00000006335) ENSAMEG00000015222 GLRA2 (ENSAMEG00000006316) GEMIN8 (ENSAMEG00000028790) GPM6B (ENSAMEG00000015927) OFD1 (ENSAMEG00000015890) ENSAMEG00000015888 RAB9A (ENSAMEG00000018882) TCEANC (ENSAMEG00000020098) EGFL6 (ENSAMEG00000015873) ENSAMEG00000010093 TLR8 (ENSAMEG00000019770) TLR7 (ENSAMEG00000019777) PRPS2 (ENSAMEG00000010106) ENSAMEG00000019784 #22 FRMPD4 (ENSAMEG00000010130) MSL3 (ENSAMEG00000010145) AMELX (ENSAMEG00000010171) ENSAMEG00000010177 HCCS (ENSAMEG00000010198) ENSAMEG00000010220 CLCN4 (ENSAMEG00000010265) WWC3 (ENSAMEG00000010338) SHROOM2 (ENSAMEG00000004939) ENSAMEG00000009277 ENSAMEG00000015133 ENSAMEG00000010492 ENSAMEG00000014903 ENSAMEG00000030660 ENSAMEG00000030203 Mustelinae ANCESTRAL SPECIES 6 ENSGT00940000155938.i ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 American mink DUPLICATION American mink MODERN SPECIES 42 FANCB (ENSNVIG00000020080) ENSNVIG00000020070 GLRA2 (ENSNVIG00000020008) GEMIN8 (ENSNVIG00000019981) GPM6B (ENSNVIG00000019935) OFD1 (ENSNVIG00000019866) ENSNVIG00000019851 ENSNVIG00000019832 RAB9A (ENSNVIG00000019824) TCEANC (ENSNVIG00000019808) EGFL6 (ENSNVIG00000019786) TMSB4X (ENSNVIG00000019760) TLR8 (ENSNVIG00000019756) TLR7 (ENSNVIG00000019753) PRPS2 (ENSNVIG00000019729) ENSNVIG00000019726 #22 FRMPD4 (ENSNVIG00000019707) MSL3 (ENSNVIG00000019505) AMELX (ENSNVIG00000019432) ENSNVIG00000019398 CCHL (ENSNVIG00000019371) MID1 (ENSNVIG00000019318) CLCN4 (ENSNVIG00000019247) WWC3 (ENSNVIG00000019080) ENSNVIG00000019054 ENSNVIG00000019019 GPR143 (ENSNVIG00000018962) American mink MODERN SPECIES 2 TOX3 (ENSNVIG00000018161) SALL1 (ENSNVIG00000018193) CYLD (ENSNVIG00000018201) #8 NOD2 (ENSNVIG00000018277) #9 SNX20 (ENSNVIG00000018295) #10 NKD1 (ENSNVIG00000018300) #11 BRD7 (ENSNVIG00000018322) #12 ADCY7 (ENSNVIG00000018370) #13 TENT4B (ENSNVIG00000018447) #14 HEATR3 (ENSNVIG00000018476) #15 CNEP1R1 (ENSNVIG00000018482) #16 ZNF423 (ENSNVIG00000018526) #18 ENSNVIG00000018548 #19 CBLN1 (ENSNVIG00000018559) #20 N4BP1 (ENSNVIG00000018575) #21 SIAH1 (ENSNVIG00000018590) #22 LONP2 (ENSNVIG00000018597) #23 ABCC11 (ENSNVIG00000018635) #24 ABCC12 (ENSNVIG00000018684) #25 KPBB (ENSNVIG00000018749) #27 ITFG1 (ENSNVIG00000018931) #28 NETO2 (ENSNVIG00000018988) #29 DNAJA2 (ENSNVIG00000019018) #31 GPT2 (ENSNVIG00000019028) #32 ENSNVIG00000019048 C16orf87 (ENSNVIG00000019087) #33 ENSNVIG00000019106 MYLK3 (ENSNVIG00000019118) #34 ORC6 (ENSNVIG00000019167) #35 VPS35 (ENSNVIG00000019198) #36 SHCBP1 (ENSNVIG00000019246) #37 Ferret DUPLICATION Ferret MODERN SPECIES 229 ASB11 (ENSMPUG00000002634) ASB9 (ENSMPUG00000002629) MOSPD2 (ENSMPUG00000002622) FANCB (ENSMPUG00000002612) GLRA2 (ENSMPUG00000002601) GEMIN8 (ENSMPUG00000002595) GPM6B (ENSMPUG00000002590) OFD1 (ENSMPUG00000002577) RAB9A (ENSMPUG00000019014) TCEANC (ENSMPUG00000019012) EGFL6 (ENSMPUG00000002572) TLR8 (ENSMPUG00000002568) TLR7 (ENSMPUG00000002563) ENSMPUG00000002560 FRMPD4 (ENSMPUG00000002551) ENSMPUG00000019010 #22 MSL3 (ENSMPUG00000002545) ENSMPUG00000002542 AMELX (ENSMPUG00000002517) ARHGAP6 (ENSMPUG00000002514) HCCS (ENSMPUG00000002511) MID1 (ENSMPUG00000002505) ENSMPUG00000019009 ENSMPUG00000002502 CLCN4 (ENSMPUG00000002495) WWC3 (ENSMPUG00000002486) ENSMPUG00000019006 SHROOM2 (ENSMPUG00000002478) GPR143 (ENSMPUG00000002452) Ferret MODERN SPECIES 174 ENSMPUG00000003260 CYLD (ENSMPUG00000003199) #8 NOD2 (ENSMPUG00000003188) #9 SNX20 (ENSMPUG00000003184) #10 NKD1 (ENSMPUG00000003177) #11 BRD7 (ENSMPUG00000003164) #12 ADCY7 (ENSMPUG00000003154) #13 TENT4B (ENSMPUG00000003121) #14 HEATR3 (ENSMPUG00000003112) #15 CNEP1R1 (ENSMPUG00000003109) #16 ENSMPUG00000003081 ZNF423 (ENSMPUG00000003075) #18 C16orf78 (ENSMPUG00000003067) #19 CBLN1 (ENSMPUG00000003041) #20 N4BP1 (ENSMPUG00000003034) #21 SIAH1 (ENSMPUG00000003029) #22 LONP2 (ENSMPUG00000003022) #23 ABCC11 (ENSMPUG00000003011) #24 ABCC12 (ENSMPUG00000003000) #25 PHKB (ENSMPUG00000002987) #27 ITFG1 (ENSMPUG00000002973) #28 NETO2 (ENSMPUG00000002918) #29 DNAJA2 (ENSMPUG00000002844) #31 GPT2 (ENSMPUG00000002837) #32 C16orf87 (ENSMPUG00000002833) #33 ENSMPUG00000002805 MYLK3 (ENSMPUG00000002736) #34 ORC6 (ENSMPUG00000002704) #35 VPS35 (ENSMPUG00000002621) #36 SHCBP1 (ENSMPUG00000002614) #37 Laurasiatheria_c ANCESTRAL SPECIES 4 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00390000005105 #30 ENSGT00940000154688.b #31 ENSGT00990000204193 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 Chiroptera ANCESTRAL SPECIES 21 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a.d #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00390000005105 #30 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 ENSGT00390000001014 Microchiroptera ANCESTRAL SPECIES 12 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a.d #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00390000005105 #30 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 ENSGT00390000001014 Microbat DUPLICATION Microbat MODERN SPECIES 2276 ENSMLUG00000013782 #22 LONP2 (ENSMLUG00000013775) #23 Microbat MODERN SPECIES 940 ENSMLUG00000022412 ENSMLUG00000027760 AOX1 (ENSMLUG00000016684) SGO2 (ENSMLUG00000004245) KCTD18 (ENSMLUG00000006605) SPATS2L (ENSMLUG00000006594) MAIP1 (ENSMLUG00000015960) TYW5 (ENSMLUG00000015955) C2orf69 (ENSMLUG00000026751) ENSMLUG00000011411 SATB2 (ENSMLUG00000001554) PLCL1 (ENSMLUG00000002677) BOLL (ENSMLUG00000004999) RFTN2 (ENSMLUG00000004991) MOB4 (ENSMLUG00000004971) ENSMLUG00000000883 #22 HSPE1 (ENSMLUG00000000878) ENSMLUG00000000871 COQ10B (ENSMLUG00000000865) SF3B1 (ENSMLUG00000000840) ENSMLUG00000005254 ANKRD44 (ENSMLUG00000010842) PGAP1 (ENSMLUG00000010784) GTF3C3 (ENSMLUG00000024692) CCDC150 (ENSMLUG00000001986) HECW2 (ENSMLUG00000007654) STK17B (ENSMLUG00000007648) DNAH7 (ENSMLUG00000007538) SLC39A10 (ENSMLUG00000007527) ENSMLUG00000028828 TMEFF2 (ENSMLUG00000007530) Greater horseshoe bat MODERN SPECIES 6 SALL1 (ENSRFEG00010016793) CYLD (ENSRFEG00010016753) #8 NOD2 (ENSRFEG00010016709) #9 SNX20 (ENSRFEG00010016632) #10 NKD1 (ENSRFEG00010016587) #11 BRD7 (ENSRFEG00010016521) #12 ADCY7 (ENSRFEG00010016429) #13 TENT4B (ENSRFEG00010016149) #14 HEATR3 (ENSRFEG00010016102) #15 CNEP1R1 (ENSRFEG00010016028) #16 ZNF423 (ENSRFEG00010015923) #18 C16orf78 (ENSRFEG00010015887) #19 CBLN1 (ENSRFEG00010015814) #20 ENSRFEG00010015754 N4BP1 (ENSRFEG00010015699) #21 SIAH1 (ENSRFEG00010015675) #22 LONP2 (ENSRFEG00010015576) #23 ABCC11 (ENSRFEG00010015462) #24 ABCC12 (ENSRFEG00010015021) #25 PHKB (ENSRFEG00010014738) #27 ITFG1 (ENSRFEG00010014334) #28 NETO2 (ENSRFEG00010014246) #29 ENSRFEG00010014197 #30 DNAJA2 (ENSRFEG00010014129) #31 GPT2 (ENSRFEG00010014039) #32 C16orf87 (ENSRFEG00010013924) #33 MYLK3 (ENSRFEG00010013868) #34 ORC6 (ENSRFEG00010013754) #35 VPS35 (ENSRFEG00010013687) #36 SHCBP1 (ENSRFEG00010013445) #37 UQCRFS1 (ENSRFEG00010013392) Equus ANCESTRAL SPECIES 20 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682.l #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00990000204193 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 Donkey DUPLICATION Donkey MODERN SPECIES 20 TOX3 (ENSEASG00005014606) SALL1 (ENSEASG00005014602) CYLD (ENSEASG00005014600) #8 NOD2 (ENSEASG00005014576) #9 SNX20 (ENSEASG00005025406) #10 NKD1 (ENSEASG00005014569) #11 BRD7 (ENSEASG00005014566) #12 ADCY7 (ENSEASG00005014561) #13 TENT4B (ENSEASG00005014551) #14 HEATR3 (ENSEASG00005014548) #15 CNEP1R1 (ENSEASG00005014546) #16 ZNF423 (ENSEASG00005014542) #18 C16orf78 (ENSEASG00005014539) #19 CBLN1 (ENSEASG00005029359) #20 N4BP1 (ENSEASG00005014535) #21 ENSEASG00005032316 #22 LONP2 (ENSEASG00005014532) #23 ABCC11 (ENSEASG00005014518) #24 ABCC12 (ENSEASG00005014498) #25 PHKB (ENSEASG00005012644) #27 ENSEASG00005027031 ENSEASG00005023690 ENSEASG00005034281 ITFG1 (ENSEASG00005022771) #28 NETO2 (ENSEASG00005022776) #29 ENSEASG00005026511 DNAJA2 (ENSEASG00005022778) #31 GPT2 (ENSEASG00005022782) #32 ENSEASG00005038267 C16orf87 (ENSEASG00005029473) #33 MYLK3 (ENSEASG00005031125) #34 Donkey MODERN SPECIES 17 ENSEASG00005034105 ENSEASG00005013667 ENSEASG00005035705 ENSEASG00005032351 HSPA6 (ENSEASG00005036040) ENSEASG00005013720 ENSEASG00005013728 FCRLA (ENSEASG00005013742) FCRLB (ENSEASG00005013747) ENSEASG00005013749 DUSP12 (ENSEASG00005013752) ATF6 (ENSEASG00005013757) ENSEASG00005013764 ENSEASG00005024673 ENSEASG00005029835 ENSEASG00005014533 #22 ENSEASG00005025372 ENSEASG00005027941 ENSEASG00005027599 ENSEASG00005031223 ENSEASG00005033819 Horse MODERN SPECIES 22 TOX3 (ENSECAG00000011429) SALL1 (ENSECAG00000011334) CYLD (ENSECAG00000007240) #8 NOD2 (ENSECAG00000017005) #9 SNX20 (ENSECAG00000016834) #10 NKD1 (ENSECAG00000015958) #11 ENSECAG00000053051 BRD7 (ENSECAG00000013213) #12 ADCY7 (ENSECAG00000007149) #13 TENT4B (ENSECAG00000040529) #14 HEATR3 (ENSECAG00000000361) #15 ZNF423 (ENSECAG00000000244) #18 C3H16orf78 (ENSECAG00000000159) #19 CBLN1 (ENSECAG00000000034) #20 N4BP1 (ENSECAG00000024238) #21 SIAH1 (ENSECAG00000044655) #22 LONP2 (ENSECAG00000022436) #23 ABCC11 (ENSECAG00000021168) #24 ABCC12 (ENSECAG00000019541) #25 ENSECAG00000053363 PHKB (ENSECAG00000018240) #27 ITFG1 (ENSECAG00000013539) #28 NETO2 (ENSECAG00000009754) #29 DNAJA2 (ENSECAG00000009636) #31 GPT2 (ENSECAG00000009485) #32 ENSECAG00000001016 C3H16orf87 (ENSECAG00000009182) #33 RAP1A (ENSECAG00000006203) MYLK3 (ENSECAG00000008775) #34 ORC6 (ENSECAG00000007182) #35 VPS35 (ENSECAG00000004911) #36 Atlantogenata ANCESTRAL SPECIES 24 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00390000005105 #30 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 ENSGT00390000001014 Afrotheria ANCESTRAL SPECIES 44 ENSGT00940000155706 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00390000005105 #30 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 ENSGT00390000001014 Afrotheria_a ANCESTRAL SPECIES 43 ENSGT00940000155706 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000161310 #37 ENSGT00390000001014 ENSGT00940000161356 Elephant MODERN SPECIES 393 ENSLAFG00000029037 #12 ENSLAFG00000006069 #14 HEATR3 (ENSLAFG00000016006) #15 CNEP1R1 (ENSLAFG00000012573) #16 ZNF423 (ENSLAFG00000018386) #18 ENSLAFG00000029190 CBLN1 (ENSLAFG00000026685) #20 N4BP1 (ENSLAFG00000017688) #21 SIAH1 (ENSLAFG00000017685) #22 LONP2 (ENSLAFG00000014081) #23 ABCC11 (ENSLAFG00000000414) #24 ABCC12 (ENSLAFG00000014750) #25 PHKB (ENSLAFG00000006480) #27 ITFG1 (ENSLAFG00000006897) #28 NETO2 (ENSLAFG00000007257) #29 DNAJA2 (ENSLAFG00000013396) #31 GPT2 (ENSLAFG00000016529) #32 C16orf87 (ENSLAFG00000009006) #33 MYLK3 (ENSLAFG00000001709) #34 ORC6 (ENSLAFG00000001707) #35 VPS35 (ENSLAFG00000001705) #36 SHCBP1 (ENSLAFG00000030123) #37 ENSLAFG00000029634 UQCRFS1 (ENSLAFG00000002797) Xenarthra ANCESTRAL SPECIES 1448 ENSGT00940000154837.f #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 Armadillo MODERN SPECIES 4061 SIAH1 (ENSDNOG00000044591) #22 LONP2 (ENSDNOG00000020009) #23 ABCC12 (ENSDNOG00000013556) #25 Eutheria DUPLICATION Eutheria ANCESTRAL SPECIES ENSGT00940000154837.e.a ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00940000154837.e.a ##22 Laurasiatheria ANCESTRAL SPECIES ENSGT00940000154837.e.a ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00940000154837.e.a ##22 Artiodactyla ANCESTRAL SPECIES ENSGT00940000154837.e.a ##22 Artiodactyla_a ANCESTRAL SPECIES ENSGT00940000154837.e.a ##22 Artiodactyla_b ANCESTRAL SPECIES ENSGT00940000154837.e.a ##22 Cetacea ANCESTRAL SPECIES ENSGT00940000154837.e.a ##22 Odontoceti ANCESTRAL SPECIES ENSGT00940000154837.e.a ##22 Odontoceti_a ANCESTRAL SPECIES ENSGT00940000154837.e.a ##22 Dolphin MODERN SPECIES 683 SIAH1 (ENSTTRG00000015195) ##22 LONP2 (ENSTTRG00000015194) #23 ABCC11 (ENSTTRG00000015193) #24 ABCC12 (ENSTTRG00000015191) #25 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000154837.e.a ##22 Hedgehog MODERN SPECIES 8093 SIAH1 (ENSEEUG00000002196) ##22 Atlantogenata ANCESTRAL SPECIES ENSGT00940000154837.e.a ##22 Afrotheria ANCESTRAL SPECIES ENSGT00940000154837.e.a ##22 Tenrec MODERN SPECIES 8018 ENSETEG00000019171 ##22 Eutheria ANCESTRAL SPECIES ENSGT00940000154837.e.b ##22 Atlantogenata ANCESTRAL SPECIES ENSGT00940000154837.e.b ##22 Afrotheria ANCESTRAL SPECIES ENSGT00940000154837.e.b ##22 Tenrec MODERN SPECIES 12515 ENSETEG00000016240 ##22 Marsupialia ANCESTRAL SPECIES 18 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 ENSGT00390000001014 Opossum MODERN SPECIES CYLD (ENSMODG00000013111) #8 NOD2 (ENSMODG00000013087) #9 SNX20 (ENSMODG00000013071) #10 NKD1 (ENSMODG00000013068) #11 ENSMODG00000013057 #12 ADCY7 (ENSMODG00000013047) #13 TENT4B (ENSMODG00000013026) #14 HEATR3 (ENSMODG00000013019) #15 CNEP1R1 (ENSMODG00000048858) #16 ENSMODG00000028787 ZNF423 (ENSMODG00000012988) #18 ENSMODG00000044145 CBLN1 (ENSMODG00000012983) #20 ENSMODG00000037529 ENSMODG00000012970 #21 SIAH1 (ENSMODG00000012963) #22 LONP2 (ENSMODG00000012957) #23 ABCC11 (ENSMODG00000029131) #24 ABCC12 (ENSMODG00000012914) #25 ENSMODG00000043051 PHKB (ENSMODG00000012900) #27 NETO2 (ENSMODG00000012864) #29 ITFG1 (ENSMODG00000012883) #28 DNAJA2 (ENSMODG00000012845) #31 GPT2 (ENSMODG00000012837) #32 C16orf87 (ENSMODG00000012820) #33 MYLK3 (ENSMODG00000012813) #34 ORC6 (ENSMODG00000012795) #35 VPS35 (ENSMODG00000012784) #36 ENSMODG00000042100 SHCBP1 (ENSMODG00000012749) #37 Marsupialia_b ANCESTRAL SPECIES 5 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00390000014556 #19 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 ENSGT00390000001014 Diprotodontia ANCESTRAL SPECIES 4 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00950000186190 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 ENSGT00390000001014 Diprotodontia_a ANCESTRAL SPECIES 5 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00950000186190 ENSGT00940000153430.a.a.e ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000162968 #24 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 ENSGT00390000001014 Common wonbat MODERN SPECIES 1024 PLAGL2 (ENSVURG00010013877) POFUT1 (ENSVURG00010013868) KIF3B (ENSVURG00010013862) ASXL1 (ENSVURG00010013852) NOL4L (ENSVURG00010013845) COMMD7 (ENSVURG00010013836) DNMT3B (ENSVURG00010013818) MAPRE1 (ENSVURG00010013812) BPIFB3 (ENSVURG00010013792) BPIFB4 (ENSVURG00010013784) ENSVURG00010013774 ENSVURG00010013743 ENSVURG00010013733 CBLN1 (ENSVURG00010013727) #20 N4BP1 (ENSVURG00010013716) #21 SIAH1 (ENSVURG00010013707) #22 LONP2 (ENSVURG00010013694) #23 ABCC11 (ENSVURG00010013674) #24 ENSVURG00010013664 #25 PHKB (ENSVURG00010013619) #27 ITFG1 (ENSVURG00010012993) #28 NETO2 (ENSVURG00010012945) #29 DNAJA2 (ENSVURG00010012918) #31 GPT2 (ENSVURG00010012907) #32 ENSVURG00010012900 C16orf87 (ENSVURG00010012890) #33 ORC6 (ENSVURG00010012881) #35 VPS35 (ENSVURG00010012859) #36 ENSVURG00010012592 SHCBP1 (ENSVURG00010012550) #37 UQCRFS1 (ENSVURG00010012533) koala MODERN SPECIES 19 CYLD (ENSPCIG00000017853) #8 NOD2 (ENSPCIG00000017861) #9 SNX20 (ENSPCIG00000017863) #10 NKD1 (ENSPCIG00000017864) #11 BRD7 (ENSPCIG00000017871) #12 ADCY7 (ENSPCIG00000016804) #13 TENT4B (ENSPCIG00000018132) #14 HEATR3 (ENSPCIG00000012841) #15 CNEP1R1 (ENSPCIG00000003801) #16 ENSPCIG00000002963 ZNF423 (ENSPCIG00000021085) #18 ENSPCIG00000021089 ENSPCIG00000033644 CBLN1 (ENSPCIG00000031036) #20 N4BP1 (ENSPCIG00000021093) #21 SIAH1 (ENSPCIG00000021095) #22 LONP2 (ENSPCIG00000021096) #23 ABCC11 (ENSPCIG00000024830) #24 ENSPCIG00000033816 #25 PHKB (ENSPCIG00000021099) #27 ITFG1 (ENSPCIG00000018576) #28 NETO2 (ENSPCIG00000016201) #29 DNAJA2 (ENSPCIG00000018580) #31 GPT2 (ENSPCIG00000018581) #32 C16orf87 (ENSPCIG00000018582) #33 MYLK3 (ENSPCIG00000018586) #34 ORC6 (ENSPCIG00000018588) #35 VPS35 (ENSPCIG00000018597) #36 ENSPCIG00000018612 SHCBP1 (ENSPCIG00000015536) #37 UQCRFS1 (ENSPCIG00000024743) Tasmanian devil MODERN SPECIES 1 CYLD (ENSSHAG00000003079) #8 NOD2 (ENSSHAG00000029900) #9 SNX20 (ENSSHAG00000018921) #10 NKD1 (ENSSHAG00000028041) #11 BRD7 (ENSSHAG00000018810) #12 ADCY7 (ENSSHAG00000018774) #13 TENT4B (ENSSHAG00000018746) #14 HEATR3 (ENSSHAG00000014261) #15 CNEP1R1 (ENSSHAG00000018694) #16 ENSSHAG00000018669 ZNF423 (ENSSHAG00000018342) #18 ENSSHAG00000018055 #19 CBLN1 (ENSSHAG00000026579) #20 N4BP1 (ENSSHAG00000016460) #21 ENSSHAG00000020968 SIAH1 (ENSSHAG00000015954) #22 LONP2 (ENSSHAG00000015566) #23 ABCC11 (ENSSHAG00000015355) #24 ABCC12 (ENSSHAG00000015026) #25 ENSSHAG00000022909 PHKB (ENSSHAG00000012047) #27 ITFG1 (ENSSHAG00000010089) #28 NETO2 (ENSSHAG00000009671) #29 DNAJA2 (ENSSHAG00000008438) #31 GPT2 (ENSSHAG00000007548) #32 C16orf87 (ENSSHAG00000029891) #33 MYLK3 (ENSSHAG00000004502) #34 ORC6 (ENSSHAG00000004207) #35 ENSSHAG00000003156 #36 ENSSHAG00000002563 ENSSHAG00000018876 #37 Platypus MODERN SPECIES 2 ACAD8 (ENSOANG00000009004) ENSOANG00000036995 VPS26B (ENSOANG00000041478) NCAPD3 (ENSOANG00000044476) JAM3 (ENSOANG00000020973) IGSF9B (ENSOANG00000043181) SPATA19 (ENSOANG00000006905) ENSOANG00000044916 OPCML (ENSOANG00000040181) NTM (ENSOANG00000042941) ENSOANG00000041435 SNX19 (ENSOANG00000004066) ADAMTS15 (ENSOANG00000048042) ADAMTS8 (ENSOANG00000012480) ZBTB44 (ENSOANG00000012479) SIAH1 (ENSOANG00000016047) #22 LONP2 (ENSOANG00000014848) #23 ABCC11 (ENSOANG00000014849) #24 ABCC12 (ENSOANG00000014850) #25 PHKB (ENSOANG00000002156) #27 ITFG1 (ENSOANG00000002159) #28 NETO2 (ENSOANG00000002160) #29 DNAJA2 (ENSOANG00000002162) #31 ENSOANG00000040349 #30 GPT2 (ENSOANG00000038755) #32 C16orf87 (ENSOANG00000002163) #33 ENSOANG00000003660 #35 VPS35 (ENSOANG00000002249) #36 SHCBP1 (ENSOANG00000005202) #37 UQCRFS1 (ENSOANG00000002291) ENSOANG00000051058 Sauria ANCESTRAL SPECIES 14 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00990000203845 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 ENSGT00390000001014 Lepidosauria ANCESTRAL SPECIES 49 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00950000186190 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00990000203845 ENSGT00390000011115 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 Episquamata ANCESTRAL SPECIES 11 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00950000186190 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00990000203845 ENSGT00390000011115 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 Laterata ANCESTRAL SPECIES 28 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00950000186190 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00990000203845 ENSGT00940000154688.b #31 ENSGT00390000011115 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 Common wall lizard MODERN SPECIES 16 AKTIP (ENSPMRG00000018887) SNX20 (ENSPMRG00000018900) #10 NKD1 (ENSPMRG00000018905) #11 ENSPMRG00000018916 BRD7 (ENSPMRG00000018967) #12 ADCY7 (ENSPMRG00000019178) #13 TENT4B (ENSPMRG00000019207) #14 HEATR3 (ENSPMRG00000019219) #15 ENSPMRG00000019239 ZNF423 (ENSPMRG00000019246) #18 ENSPMRG00000019258 CBLN1 (ENSPMRG00000019262) #20 ENSPMRG00000019267 ENSPMRG00000019269 N4BP1 (ENSPMRG00000019276) #21 SIAH1 (ENSPMRG00000019284) #22 LONP2 (ENSPMRG00000019286) #23 ABCC12 (ENSPMRG00000019304) #25 PHKB (ENSPMRG00000019388) #27 ITFG1 (ENSPMRG00000019548) #28 NETO2 (ENSPMRG00000019573) #29 DNAJA2 (ENSPMRG00000019588) #31 ENSPMRG00000019592 GPT2 (ENSPMRG00000019601) #32 ENSPMRG00000019607 ENSPMRG00000019612 C16orf87 (ENSPMRG00000019615) #33 MYLK3 (ENSPMRG00000019618) #34 ORC6 (ENSPMRG00000019627) #35 VPS35 (ENSPMRG00000019631) #36 ENSPMRG00000019644 Argentine black and white tegu MODERN SPECIES 51 TOX3 (ENSSMRG00000005925) SALL1 (ENSSMRG00000005776) CYLD (ENSSMRG00000005740) #8 SNX20 (ENSSMRG00000005732) #10 NKD1 (ENSSMRG00000005727) #11 BRD7 (ENSSMRG00000005252) #12 ADCY7 (ENSSMRG00000005205) #13 TENT4B (ENSSMRG00000005198) #14 HEATR3 (ENSSMRG00000005192) #15 CNEP1R1 (ENSSMRG00000005189) #16 ENSSMRG00000005169 ZNF423 (ENSSMRG00000005142) #18 ENSSMRG00000005139 CBLN1 (ENSSMRG00000005135) #20 N4BP1 (ENSSMRG00000005116) #21 SIAH1 (ENSSMRG00000005113) #22 LONP2 (ENSSMRG00000005107) #23 ABCC12 (ENSSMRG00000005050) #25 PHKB (ENSSMRG00000005032) #27 ITFG1 (ENSSMRG00000005020) #28 NETO2 (ENSSMRG00000005006) #29 ENSSMRG00000005000 DNAJA2 (ENSSMRG00000004994) #31 ENSSMRG00000004993 GPT2 (ENSSMRG00000004992) #32 C16orf87 (ENSSMRG00000004991) #33 MYLK3 (ENSSMRG00000004989) #34 ORC6 (ENSSMRG00000004986) #35 VPS35 (ENSSMRG00000004978) #36 ENSSMRG00000004805 Toxicofera ANCESTRAL SPECIES 16 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00950000186190 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00990000203845 ENSGT00390000011115 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 Elapidae ANCESTRAL SPECIES 17 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00950000186190 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00530000063553.b.b.z.a #23 ENSGT00940000154837 #22 ENSGT00530000063553.b.b.z.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B.g #27 ENSGT00390000013367.a #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00990000203845 ENSGT00390000011115 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 Elapidae_a ANCESTRAL SPECIES 28 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00950000186190 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b.z.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B.g #27 ENSGT00390000013367.a #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00990000203845 ENSGT00390000011115 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 Acanthophiinae ANCESTRAL SPECIES 26 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00950000186190 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b.z.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B.g #27 ENSGT00390000013367.a #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00990000203845 ENSGT00390000011115 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 Eastern brown snake MODERN SPECIES 65 SALL1 (ENSPTXG00000009238) ENSPTXG00000009237 CYLD (ENSPTXG00000009236) #8 SNX20 (ENSPTXG00000009222) #10 NKD1 (ENSPTXG00000009220) #11 BRD7 (ENSPTXG00000009078) #12 ADCY7 (ENSPTXG00000009074) #13 TENT4B (ENSPTXG00000009072) #14 HEATR3 (ENSPTXG00000009063) #15 CNEP1R1 (ENSPTXG00000009061) #16 ENSPTXG00000009059 ZNF423 (ENSPTXG00000009058) #18 ENSPTXG00000009057 ENSPTXG00000009056 #20 N4BP1 (ENSPTXG00000009055) #21 SIAH1 (ENSPTXG00000009054) #22 LONP2 (ENSPTXG00000009053) #23 ABCC12 (ENSPTXG00000009051) #25 ENSPTXG00000009048 #27 ITFG1 (ENSPTXG00000009047) #28 NETO2 (ENSPTXG00000009046) #29 ENSPTXG00000009045 DNAJA2 (ENSPTXG00000009044) #31 ENSPTXG00000009043 GPT2 (ENSPTXG00000009042) #32 C16orf87 (ENSPTXG00000009041) #33 MYLK3 (ENSPTXG00000009040) #34 ORC6 (ENSPTXG00000009039) #35 VPS35 (ENSPTXG00000009038) #36 ENSPTXG00000009037 SHCBP1 (ENSPTXG00000009036) #37 Blue-lipped sea krait MODERN SPECIES 647 N4BP1 (ENSLLTG00000017372) #21 SIAH1 (ENSLLTG00000017367) #22 Indian cobra MODERN SPECIES 12 SALL1 (ENSNNAG00000013749) CYLD (ENSNNAG00000013712) #8 SNX20 (ENSNNAG00000013703) #10 NKD1 (ENSNNAG00000013679) #11 BRD7 (ENSNNAG00000013586) #12 ADCY7 (ENSNNAG00000013071) #13 TENT4B (ENSNNAG00000012985) #14 HEATR3 (ENSNNAG00000012932) #15 CNEP1R1 (ENSNNAG00000012910) #16 ENSNNAG00000012817 ENSNNAG00000012795 #18 ENSNNAG00000012776 #18 CBLN1 (ENSNNAG00000012761) #20 N4BP1 (ENSNNAG00000012736) #21 ENSNNAG00000012720 #23 SIAH1 (ENSNNAG00000012705) #22 ENSNNAG00000012593 #23 ENSNNAG00000012561 #25 ENSNNAG00000012537 #25 ENSNNAG00000012496 #25 PHKB (ENSNNAG00000012262) #27 ITFG1 (ENSNNAG00000012137) #28 NETO2 (ENSNNAG00000012025) #29 ENSNNAG00000011998 DNAJA2 (ENSNNAG00000011972) #31 ENSNNAG00000011909 GPT2 (ENSNNAG00000011858) #32 MYLK3 (ENSNNAG00000011712) #34 ORC6 (ENSNNAG00000011683) #35 VPS35 (ENSNNAG00000011604) #36 ENSNNAG00000011400 Lizard MODERN SPECIES 803 CHD9 (ENSACAG00000016150) RBL2 (ENSACAG00000016269) AKTIP (ENSACAG00000034690) RPGRIP1L (ENSACAG00000016458) ENSACAG00000037502 FTO (ENSACAG00000016467) ENSACAG00000026158 ENSACAG00000038416 MMP2 (ENSACAG00000016520) LPCAT2 (ENSACAG00000016591) ENSACAG00000045118 ENSACAG00000016647 SLC6A2 (ENSACAG00000016675) ENSACAG00000034601 ENSACAG00000042674 SIAH1 (ENSACAG00000014413) #22 LONP2 (ENSACAG00000014302) #23 ABCC12 (ENSACAG00000014129) #25 PHKB (ENSACAG00000013941) #27 ENSACAG00000040760 ENSACAG00000039953 ENSACAG00000042577 ITFG1 (ENSACAG00000013775) #28 ENSACAG00000042982 ENSACAG00000041183 ENSACAG00000035123 NETO2 (ENSACAG00000013742) #29 DNAJA2 (ENSACAG00000013584) #31 ENSACAG00000041233 ENSACAG00000021995 GPT2 (ENSACAG00000013552) #32 tuatara MODERN SPECIES 1591 SIAH1 (ENSSPUG00000002647) #22 LONP2 (ENSSPUG00000002661) #23 Archelosauria ANCESTRAL SPECIES 16 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00990000203845 ENSGT00940000154688.b #31 ENSGT00990000204193 ENSGT01040000242725 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a Archosauria ANCESTRAL SPECIES 14 ENSGT01040000241257 ENSGT00940000155706 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00990000203845 ENSGT00940000154688.b #31 ENSGT00990000204193 ENSGT01040000242725 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a Aves ANCESTRAL SPECIES 22 ENSGT01040000241257 ENSGT00940000155706 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00990000203845 ENSGT00940000154688.b #31 ENSGT01040000242725 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 African ostrich MODERN SPECIES 737 ENSSCUG00000011651 TOX3 (ENSSCUG00000011654) ENSSCUG00000011661 ENSSCUG00000011662 ENSSCUG00000011664 CYLD (ENSSCUG00000011670) #8 SNX20 (ENSSCUG00000011673) #10 NKD1 (ENSSCUG00000011675) #11 BRD7 (ENSSCUG00000011678) #12 ADCY7 (ENSSCUG00000011683) #13 TENT4B (ENSSCUG00000011689) #14 HEATR3 (ENSSCUG00000011696) #15 CNEP1R1 (ENSSCUG00000011701) #16 ZNF423 (ENSSCUG00000011707) #18 N4BP1 (ENSSCUG00000011720) #21 SIAH1 (ENSSCUG00000011723) #22 LONP2 (ENSSCUG00000011726) #23 ABCC12 (ENSSCUG00000011735) #25 PHKB (ENSSCUG00000011790) #27 ITFG1 (ENSSCUG00000011856) #28 NETO2 (ENSSCUG00000011869) #29 DNAJA2 (ENSSCUG00000011872) #31 ENSSCUG00000011876 C16orf87 (ENSSCUG00000011880) #33 GPT2 (ENSSCUG00000011886) #32 MYLK3 (ENSSCUG00000011892) #34 ORC6 (ENSSCUG00000011895) #35 VPS35 (ENSSCUG00000011901) #36 ENSSCUG00000011904 SHCBP1 (ENSSCUG00000011909) #37 UQCRFS1 (ENSSCUG00000011911) Neognathae ANCESTRAL SPECIES 13 ENSGT01040000241257 ENSGT00940000155706 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00990000203845 ENSGT00940000154688.b #31 ENSGT01040000242725 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 ENSGT00390000001014 Neognathae_b ANCESTRAL SPECIES 15 ENSGT00940000155706 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00960000190127 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00990000203845 ENSGT00940000154688.b #31 ENSGT01040000242725 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 ENSGT00390000001014 Passeriformes ANCESTRAL SPECIES 13 ENSGT00940000155706 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00960000190127 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00990000203845 ENSGT00940000154688.b #31 ENSGT01040000242725 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 ENSGT00390000001014 Passeriformes_d ANCESTRAL SPECIES 13 ENSGT00940000155706 ENSGT00940000158043.a ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00960000190127 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00990000203845 ENSGT00940000154688.b #31 ENSGT01040000242725 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 ENSGT00390000001014 Flycatcher MODERN SPECIES 2 TOX3 (ENSFALG00000000072) SALL1 (ENSFALG00000000074) CYLD (ENSFALG00000000075) #8 SNX20 (ENSFALG00000000077) #10 NKD1 (ENSFALG00000000078) #11 ENSFALG00000027589 BRD7 (ENSFALG00000000080) #12 ADCY7 (ENSFALG00000000086) #13 TENT4B (ENSFALG00000000087) #14 HEATR3 (ENSFALG00000000089) #15 CNEP1R1 (ENSFALG00000025598) #16 ZNF423 (ENSFALG00000000097) #18 CBLN1 (ENSFALG00000000098) #20 ENSFALG00000026934 N4BP1 (ENSFALG00000000101) #21 SIAH1 (ENSFALG00000000104) #22 LONP2 (ENSFALG00000000103) #23 PHKB (ENSFALG00000000107) #27 ITFG1 (ENSFALG00000000123) #28 NETO2 (ENSFALG00000000130) #29 DNAJA2 (ENSFALG00000000132) #31 ENSFALG00000000135 GPT2 (ENSFALG00000028158) #32 ENSFALG00000000152 #33 MYLK3 (ENSFALG00000000153) #34 ORC6 (ENSFALG00000028855) #35 VPS35 (ENSFALG00000000176) #36 ENSFALG00000000193 ENSFALG00000028734 UQCRFS1 (ENSFALG00000014175) POP4 (ENSFALG00000000206) Passeriformes_g ANCESTRAL SPECIES 17 ENSGT00940000155706 ENSGT00940000158043.a ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00960000190127 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00990000203845 ENSGT00940000154688.b #31 ENSGT00940000164552.f.b ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a Passeroidea ANCESTRAL SPECIES 17 ENSGT00950000183202.a.b ENSGT00940000155706 ENSGT00940000158043.a ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000008576 #16 ENSGT00390000012529 #15 ENSGT00940000158492 #18 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00990000203845 ENSGT00940000154688.b #31 ENSGT01040000242725 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 ENSGT00390000001014 Common canary MODERN SPECIES 14 AKTIP (ENSSCAG00000004831) RBL2 (ENSSCAG00000004824) CHD9 (ENSSCAG00000004806) TOX3 (ENSSCAG00000004793) SALL1 (ENSSCAG00000004776) CYLD (ENSSCAG00000004758) #8 SNX20 (ENSSCAG00000004752) #10 NKD1 (ENSSCAG00000004748) #11 BRD7 (ENSSCAG00000004669) #12 ADCY7 (ENSSCAG00000004597) #13 TENT4B (ENSSCAG00000004547) #14 HEATR3 (ENSSCAG00000004471) #15 ENSSCAG00000004461 ZNF423 (ENSSCAG00000004455) #18 N4BP1 (ENSSCAG00000004443) #21 SIAH1 (ENSSCAG00000004438) #22 LONP2 (ENSSCAG00000004317) #23 PHKB (ENSSCAG00000004271) #27 ITFG1 (ENSSCAG00000004260) #28 NETO2 (ENSSCAG00000004251) #29 ENSSCAG00000004245 DNAJA2 (ENSSCAG00000004239) #31 ENSSCAG00000004233 GPT2 (ENSSCAG00000004200) #32 C16orf87 (ENSSCAG00000004191) #33 MYLK3 (ENSSCAG00000004186) #34 ORC6 (ENSSCAG00000004180) #35 VPS35 (ENSSCAG00000004178) #36 ENSSCAG00000004175 SHCBP1 (ENSSCAG00000004167) #37 UQCRFS1 (ENSSCAG00000004159) Zebra finch MODERN SPECIES 2 PHLPP2 (ENSTGUG00000008329) TAT (ENSTGUG00000008391) TERF2IP (ENSTGUG00000020387) KARS1 (ENSTGUG00000008400) ADAT1 (ENSTGUG00000008449) GABARAPL2 (ENSTGUG00000024691) TMEM231 (ENSTGUG00000008461) BRD7 (ENSTGUG00000008471) #12 ADCY7 (ENSTGUG00000008504) #13 TENT4B (ENSTGUG00000008561) #14 CNEP1R1 (ENSTGUG00000022831) #16 HEATR3 (ENSTGUG00000008582) #15 ZNF423 (ENSTGUG00000008627) #18 CBLN1 (ENSTGUG00000024110) #20 N4BP1 (ENSTGUG00000008647) #21 SIAH1 (ENSTGUG00000008664) #22 LONP2 (ENSTGUG00000008667) #23 PHKB (ENSTGUG00000008701) #27 ITFG1 (ENSTGUG00000008754) #28 NETO2 (ENSTGUG00000025323) #29 DNAJA2 (ENSTGUG00000029001) #31 ENSTGUG00000026236 ENSTGUG00000008822 GPT2 (ENSTGUG00000008832) #32 C16orf87 (ENSTGUG00000028626) #33 MYLK3 (ENSTGUG00000008856) #34 ENSTGUG00000008874 #35 VPS35 (ENSTGUG00000008891) #36 ENSTGUG00000008928 SHCBP1 (ENSTGUG00000008933) #37 UQCRFS1 (ENSTGUG00000008947) Medium ground finch MODERN SPECIES 118 RBL2 (ENSGFOG00000014816) CHD9 (ENSGFOG00000014815) TOX3 (ENSGFOG00000014814) SALL1 (ENSGFOG00000014812) CYLD (ENSGFOG00000014811) #8 SNX20 (ENSGFOG00000014810) #10 NKD1 (ENSGFOG00000014809) #11 ENSGFOG00000014808 BRD7 (ENSGFOG00000014801) #12 ADCY7 (ENSGFOG00000014793) #13 TENT4B (ENSGFOG00000014790) #14 HEATR3 (ENSGFOG00000014785) #15 CNEP1R1 (ENSGFOG00000014782) #16 ZNF423 (ENSGFOG00000014781) #18 N4BP1 (ENSGFOG00000014780) #21 SIAH1 (ENSGFOG00000014779) #22 LONP2 (ENSGFOG00000014777) #23 Great tit MODERN SPECIES 2 CHD9 (ENSPMJG00000001906) TOX3 (ENSPMJG00000002068) SALL1 (ENSPMJG00000002204) CYLD (ENSPMJG00000002241) #8 SNX20 (ENSPMJG00000002269) #10 NKD1 (ENSPMJG00000002321) #11 ENSPMJG00000002341 BRD7 (ENSPMJG00000002349) #12 ADCY7 (ENSPMJG00000002418) #13 TENT4B (ENSPMJG00000002519) #14 HEATR3 (ENSPMJG00000002534) #15 CNEP1R1 (ENSPMJG00000002544) #16 ZNF423 (ENSPMJG00000002597) #18 CBLN1 (ENSPMJG00000002660) #20 N4BP1 (ENSPMJG00000002728) #21 SIAH1 (ENSPMJG00000002759) #22 LONP2 (ENSPMJG00000002764) #23 PHKB (ENSPMJG00000002784) #27 ITFG1 (ENSPMJG00000002869) #28 NETO2 (ENSPMJG00000002880) #29 DNAJA2 (ENSPMJG00000002889) #31 ENSPMJG00000002906 ENSPMJG00000002915 GPT2 (ENSPMJG00000002932) #32 C16orf87 (ENSPMJG00000002939) #33 ENSPMJG00000002942 ORC6 (ENSPMJG00000002970) #35 VPS35 (ENSPMJG00000002974) #36 ENSPMJG00000002999 SHCBP1 (ENSPMJG00000003015) #37 UQCRFS1 (ENSPMJG00000003016) Neognathae_c ANCESTRAL SPECIES 18 ENSGT00940000155706 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00960000190127 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00940000159811.c #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00990000203845 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 ENSGT00390000001014 ENSGT00940000161356 Kakapo DUPLICATION Kakapo MODERN SPECIES 4 ENSSHBG00005019731 ENSSHBG00005019748 ENSSHBG00005000016 ENSSHBG00005000034 ENSSHBG00005000042 ENSSHBG00005000057 ENSSHBG00005000059 ENSSHBG00005000067 ENSSHBG00005000077 ENSSHBG00005000080 ENSSHBG00005000083 #32 ENSSHBG00005000087 ENSSHBG00005000089 ENSSHBG00005000095 #29 ENSSHBG00005000122 ENSSHBG00005000141 #22 ENSSHBG00005000164 #23 ENSSHBG00005000175 ENSSHBG00005000184 ENSSHBG00005000196 ENSSHBG00005000217 ENSSHBG00005000223 ENSSHBG00005000228 ENSSHBG00005000231 ENSSHBG00005000234 ENSSHBG00005000237 ENSSHBG00005000240 ENSSHBG00005000247 ENSSHBG00005000249 ENSSHBG00005000261 ENSSHBG00005000267 Kakapo MODERN SPECIES 19 ENSSHBG00005002921 ENSSHBG00005002199 ENSSHBG00005002192 CYLD (ENSSHBG00005002168) #8 ENSSHBG00005002150 #10 ENSSHBG00005002133 #11 ENSSHBG00005002050 BRD7 (ENSSHBG00005002033) #12 ADCY7 (ENSSHBG00005001991) #13 ENSSHBG00005001960 #14 ENSSHBG00005001903 #15 CNEP1R1 (ENSSHBG00005001851) #16 ENSSHBG00005001748 #18 ENSSHBG00005001669 #20 ENSSHBG00005001653 #21 ENSSHBG00005001629 #22 LONP2 (ENSSHBG00005001588) #23 ENSSHBG00005001570 ENSSHBG00005001553 ENSSHBG00005001540 ENSSHBG00005001524 ENSSHBG00005001492 ENSSHBG00005001466 ENSSHBG00005001409 ENSSHBG00005001350 ENSSHBG00005000156 ENSSHBG00005014347 DPY19L3 (ENSSHBG00005014311) ENSSHBG00005014261 PDCD5 (ENSSHBG00005014245) RGS9BP (ENSSHBG00005014236) Golden eagle MODERN SPECIES 25 RBL2 (ENSACCG00020003164) CHD9 (ENSACCG00020003121) TOX3 (ENSACCG00020003095) SALL1 (ENSACCG00020003074) CYLD (ENSACCG00020003038) #8 SNX20 (ENSACCG00020003015) #10 NKD1 (ENSACCG00020002998) #11 BRD7 (ENSACCG00020002949) #12 ADCY7 (ENSACCG00020002875) #13 TENT4B (ENSACCG00020002781) #14 HEATR3 (ENSACCG00020002623) #15 CNEP1R1 (ENSACCG00020002590) #16 ZNF423 (ENSACCG00020002554) #18 CBLN1 (ENSACCG00020002538) #20 N4BP1 (ENSACCG00020002525) #21 SIAH1 (ENSACCG00020002509) #22 LONP2 (ENSACCG00020002482) #23 PHKB (ENSACCG00020002367) #27 ITFG1 (ENSACCG00020002263) #28 NETO2 (ENSACCG00020002228) #29 ENSACCG00020002190 DNAJA2 (ENSACCG00020002167) #31 ENSACCG00020002146 GPT2 (ENSACCG00020002131) #32 C16orf87 (ENSACCG00020002109) #33 ORC6 (ENSACCG00020002091) #35 VPS35 (ENSACCG00020002071) #36 ENSACCG00020002051 SHCBP1 (ENSACCG00020002035) #37 ENSACCG00020002013 UQCRFS1 (ENSACCG00020002004) Galloanserae ANCESTRAL SPECIES 12 ENSGT00950000183202.a.b ENSGT00940000155706 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00990000203845 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 ENSGT00390000001014 ENSGT00940000161356 Phasianidae ANCESTRAL SPECIES 12 ENSGT00950000183202.a.b ENSGT00940000155706.x ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00990000203845 ENSGT00390000011115 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 ENSGT00390000001014 Japanese quail MODERN SPECIES 2 RBL2 (ENSCJPG00005012415) CHD9 (ENSCJPG00005012416) TOX3 (ENSCJPG00005014332) SALL1 (ENSCJPG00005014342) CYLD (ENSCJPG00005014348) #8 SNX20 (ENSCJPG00005014349) #10 NKD1 (ENSCJPG00005014352) #11 BRD7 (ENSCJPG00005014353) #12 ADCY7 (ENSCJPG00005014354) #13 TENT4B (ENSCJPG00005014355) #14 HEATR3 (ENSCJPG00005014356) #15 CNEP1R1 (ENSCJPG00005014357) #16 ZNF423 (ENSCJPG00005014360) #18 CBLN1 (ENSCJPG00005014363) #20 N4BP1 (ENSCJPG00005014367) #21 SIAH1 (ENSCJPG00005014369) #22 LONP2 (ENSCJPG00005014370) #23 PHKB (ENSCJPG00005014372) #27 ITFG1 (ENSCJPG00005014373) #28 NETO2 (ENSCJPG00005014374) #29 DNAJA2 (ENSCJPG00005014375) #31 ENSCJPG00005014376 ENSCJPG00005014377 GPT2 (ENSCJPG00005014378) #32 C16orf87 (ENSCJPG00005014379) #33 MYLK3 (ENSCJPG00005014380) #34 ORC6 (ENSCJPG00005014381) #35 VPS35 (ENSCJPG00005014382) #36 SHCBP1 (ENSCJPG00005014383) #37 UQCRFS1 (ENSCJPG00005014384) VSTM2B (ENSCJPG00005014385) Phasianidae_b ANCESTRAL SPECIES 14 ENSGT00950000183202.a.b ENSGT00940000155706.x ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301.c #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00990000203845 ENSGT00390000011115 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 ENSGT00390000001014 Chicken MODERN SPECIES 2 RBL2 (ENSGALG00010021778) CHD9 (ENSGALG00010021789) TOX3 (ENSGALG00010024523) SALL1 (ENSGALG00010022707) CYLD (ENSGALG00010022737) #8 SNX20 (ENSGALG00010022754) #10 NKD1 (ENSGALG00010024038) #11 BRD7 (ENSGALG00010024063) #12 ADCY7 (ENSGALG00010024074) #13 PAPD5 (ENSGALG00010024080) #14 HEATR3 (ENSGALG00010025910) #15 CNEP1R1 (ENSGALG00010024101) #16 ZNF423 (ENSGALG00010024152) #18 CBLN1 (ENSGALG00010024173) #20 N4BP1 (ENSGALG00010024178) #21 SIAH1 (ENSGALG00010024220) #22 LONP2 (ENSGALG00010024230) #23 PHKB (ENSGALG00010024263) #27 ITFG1 (ENSGALG00010024314) #28 NETO2 (ENSGALG00010024340) #29 DNAJA2 (ENSGALG00010023405) #31 ENSGALG00010023468 CDCA9 (ENSGALG00010023513) GPT2 (ENSGALG00010023612) #32 C16orf87 (ENSGALG00010023665) #33 MYLK3 (ENSGALG00010023686) #34 ORC6 (ENSGALG00010023733) #35 VPS35 (ENSGALG00010023783) #36 ENSGALG00010023832 SHCBP1 (ENSGALG00010023854) #37 UQCRFS1 (ENSGALG00010023871) Turkey MODERN SPECIES 4 ENSMGAG00000005283 #36 ENSMGAG00000005307 #37 ENSMGAG00000018317 MYLK3 (ENSMGAG00000005260) #34 ORC6 (ENSMGAG00000005268) #35 C16orf87 (ENSMGAG00000005255) #33 ENSMGAG00000005229 #32 ENSMGAG00000005213 ENSMGAG00000005195 #31 ENSMGAG00000018952 ENSMGAG00000005178 #29 ENSMGAG00000022235 #27 ENSMGAG00000005122 #27 ENSMGAG00000022110 #23 ENSMGAG00000005089 #23 ENSMGAG00000015587 #22 ENSMGAG00000005064 #21 ENSMGAG00000017995 #20 ENSMGAG00000021372 #18 ENSMGAG00000005058 #18 ENSMGAG00000022910 ENSMGAG00000018529 #16 ENSMGAG00000005016 #15 ENSMGAG00000021282 #15 ENSMGAG00000022137 #14 ENSMGAG00000004957 #14 ENSMGAG00000004849 #13 ENSMGAG00000004779 #12 ENSMGAG00000004728 #11 ENSMGAG00000004775 #10 ENSMGAG00000004739 #8 Anatidae ANCESTRAL SPECIES 17 ENSGT00950000183202.a.b ENSGT00940000155706 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00940000158492 #18 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT01010000224815 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 ENSGT00390000001014 ENSGT00940000161356 Pink-footed goose MODERN SPECIES 80 CYLD (ENSABRG00000003363) #8 SNX20 (ENSABRG00000003350) #10 NKD1 (ENSABRG00000003329) #11 BRD7 (ENSABRG00000002889) #12 ADCY7 (ENSABRG00000002759) #13 TENT4B (ENSABRG00000002683) #14 HEATR3 (ENSABRG00000002263) #15 CNEP1R1 (ENSABRG00000002231) #16 ZNF423 (ENSABRG00000002216) #18 CBLN1 (ENSABRG00000002207) #20 ENSABRG00000002203 N4BP1 (ENSABRG00000002167) #21 SIAH1 (ENSABRG00000002147) #22 LONP2 (ENSABRG00000002117) #23 PHKB (ENSABRG00000001982) #27 ITFG1 (ENSABRG00000001965) #28 NETO2 (ENSABRG00000001942) #29 ENSABRG00000001917 DNAJA2 (ENSABRG00000001910) #31 ENSABRG00000001876 GPT2 (ENSABRG00000001845) #32 C16orf87 (ENSABRG00000001820) #33 MYLK3 (ENSABRG00000001750) #34 ORC6 (ENSABRG00000001721) #35 VPS35 (ENSABRG00000001695) #36 ENSABRG00000001429 SHCBP1 (ENSABRG00000001406) #37 UQCRFS1 (ENSABRG00000001387) Duck MODERN SPECIES 3 AMFR (ENSAPLG00000011375) NUDT21 (ENSAPLG00000012153) OGFOD1 (ENSAPLG00000012283) BBS2 (ENSAPLG00000012564) MT4 (ENSAPLG00000013360) ENSAPLG00000021636 NUP93 (ENSAPLG00000014016) ENSAPLG00000016836 TMEM170A (ENSAPLG00000014893) ENSAPLG00000015029 WDR59 (ENSAPLG00000015680) RFWD3 (ENSAPLG00000016162) ENSAPLG00000002850 ENSAPLG00000016202 N4BP1 (ENSAPLG00000012344) #21 SIAH1 (ENSAPLG00000002314) #22 LONP2 (ENSAPLG00000012127) #23 PHKB (ENSAPLG00000011023) #27 ITFG1 (ENSAPLG00000010587) #28 NETO2 (ENSAPLG00000010563) #29 ENSAPLG00000028752 DNAJA2 (ENSAPLG00000010151) #31 ENSAPLG00000010106 GPT2 (ENSAPLG00000009804) #32 C16orf87 (ENSAPLG00000009799) #33 MYLK3 (ENSAPLG00000009568) #34 ENSAPLG00000020114 #35 VPS35 (ENSAPLG00000009261) #36 ENSAPLG00000020084 SHCBP1 (ENSAPLG00000008932) #37 UQCRFS1 (ENSAPLG00000002275) Australian saltwater crocodile MODERN SPECIES 35 ENSCPRG00005003475 TOX3 (ENSCPRG00005003482) ENSCPRG00005003503 ENSCPRG00005003506 CYLD (ENSCPRG00005003515) #8 SNX20 (ENSCPRG00005003533) #10 NKD1 (ENSCPRG00005003548) #11 BRD7 (ENSCPRG00005003570) #12 ADCY7 (ENSCPRG00005003595) #13 TENT4B (ENSCPRG00005003615) #14 HEATR3 (ENSCPRG00005003660) #15 CNEP1R1 (ENSCPRG00005003802) #16 ZNF423 (ENSCPRG00005003814) #18 CBLN1 (ENSCPRG00005003876) #20 N4BP1 (ENSCPRG00005003890) #21 SIAH1 (ENSCPRG00005003908) #22 LONP2 (ENSCPRG00005003912) #23 ABCC12 (ENSCPRG00005003919) #25 PHKB (ENSCPRG00005003951) #27 ITFG1 (ENSCPRG00005003999) #28 NETO2 (ENSCPRG00005004001) #29 DNAJA2 (ENSCPRG00005004005) #31 ENSCPRG00005004009 ENSCPRG00005004013 GPT2 (ENSCPRG00005004017) #32 C16orf87 (ENSCPRG00005004023) #33 MYLK3 (ENSCPRG00005004027) #34 ORC6 (ENSCPRG00005004032) #35 VPS35 (ENSCPRG00005004039) #36 ENSCPRG00005004055 SHCBP1 (ENSCPRG00005004067) #37 Cryptodira ANCESTRAL SPECIES 14 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00990000203845 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 ENSGT00390000001014 Testudinoidea ANCESTRAL SPECIES 13 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492.w.b #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00990000203845 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 ENSGT00390000001014 Emydidae ANCESTRAL SPECIES 33 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492.w.b #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 ENSGT00390000001014 ENSGT00940000161356 Three-toed box turtle MODERN SPECIES 60 TOX3 (ENSTMTG00000022443) SALL1 (ENSTMTG00000022452) CYLD (ENSTMTG00000022457) #8 SNX20 (ENSTMTG00000022462) #10 NKD1 (ENSTMTG00000022468) #11 BRD7 (ENSTMTG00000022489) #12 ADCY7 (ENSTMTG00000022528) #13 TENT4B (ENSTMTG00000022548) #14 HEATR3 (ENSTMTG00000022550) #15 CNEP1R1 (ENSTMTG00000022551) #16 ENSTMTG00000022552 ZNF423 (ENSTMTG00000022555) #18 ENSTMTG00000022559 CBLN1 (ENSTMTG00000022561) #20 N4BP1 (ENSTMTG00000022563) #21 SIAH1 (ENSTMTG00000022565) #22 LONP2 (ENSTMTG00000022570) #23 ABCC12 (ENSTMTG00000022577) #25 PHKB (ENSTMTG00000022592) #27 ITFG1 (ENSTMTG00000022635) #28 NETO2 (ENSTMTG00000022688) #29 DNAJA2 (ENSTMTG00000022691) #31 GPT2 (ENSTMTG00000022695) #32 C16orf87 (ENSTMTG00000022698) #33 MYLK3 (ENSTMTG00000022699) #34 ORC6 (ENSTMTG00000022700) #35 VPS35 (ENSTMTG00000022702) #36 ENSTMTG00000022710 SHCBP1 (ENSTMTG00000022715) #37 UQCRFS1 (ENSTMTG00000022718) VSTM2B (ENSTMTG00000022720) painted turtle MODERN SPECIES 4 TOX3 (ENSCPBG00000015917) SALL1 (ENSCPBG00000015924) CYLD (ENSCPBG00000015931) #8 SNX20 (ENSCPBG00000015934) #10 NKD1 (ENSCPBG00000015936) #11 BRD7 (ENSCPBG00000015938) #12 ADCY7 (ENSCPBG00000015953) #13 TENT4B (ENSCPBG00000015960) #14 HEATR3 (ENSCPBG00000015964) #15 CNEP1R1 (ENSCPBG00000015966) #16 ENSCPBG00000015969 ZNF423 (ENSCPBG00000015985) #18 ENSCPBG00000015998 CBLN1 (ENSCPBG00000016000) #20 N4BP1 (ENSCPBG00000016004) #21 SIAH1 (ENSCPBG00000016014) #22 LONP2 (ENSCPBG00000016016) #23 ENSCPBG00000016021 #25 ENSCPBG00000016027 #25 PHKB (ENSCPBG00000016038) #27 ITFG1 (ENSCPBG00000016056) #28 NETO2 (ENSCPBG00000016061) #29 DNAJA2 (ENSCPBG00000016066) #31 ENSCPBG00000016068 ENSCPBG00000016071 GPT2 (ENSCPBG00000016074) #32 C16orf87 (ENSCPBG00000016079) #33 MYLK3 (ENSCPBG00000016081) #34 ORC6 (ENSCPBG00000016088) #35 VPS35 (ENSCPBG00000016092) #36 ENSCPBG00000016095 Testudinidae ANCESTRAL SPECIES 17 ENSGT01000000220330 ENSGT00940000158043 ENSGT00940000155938 ENSGT00390000018123.a.a #8 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00940000158492.w.b #18 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000159578 #25 ENSGT00950000183118.B #27 ENSGT00390000013367 #28 ENSGT00940000156041 #29 ENSGT00940000154688.b #31 ENSGT00990000203845 ENSGT00940000159061 #32 ENSGT00390000009505 #33 ENSGT00940000160007 #34 ENSGT00390000007370 #35 ENSGT00390000007315 #36 ENSGT00940000163206.a ENSGT00940000161310 #37 ENSGT00390000001014 Goode s thornscrub tortoise MODERN SPECIES 3 TOX3 (ENSGEVG00005013709) ENSGEVG00005013844 SALL1 (ENSGEVG00005013862) CYLD (ENSGEVG00005013915) #8 SNX20 (ENSGEVG00005013947) #10 NKD1 (ENSGEVG00005013964) #11 BRD7 (ENSGEVG00005014130) #12 ADCY7 (ENSGEVG00005014804) #13 TENT4B (ENSGEVG00005014891) #14 HEATR3 (ENSGEVG00005014998) #15 CNEP1R1 (ENSGEVG00005015041) #16 ENSGEVG00005015090 ZNF423 (ENSGEVG00005015167) #18 CBLN1 (ENSGEVG00005015229) #20 N4BP1 (ENSGEVG00005015279) #21 SIAH1 (ENSGEVG00005015318) #22 LONP2 (ENSGEVG00005015339) #23 ABCC12 (ENSGEVG00005015407) #25 PHKB (ENSGEVG00005015655) #27 ITFG1 (ENSGEVG00005015840) #28 NETO2 (ENSGEVG00005015875) #29 DNAJA2 (ENSGEVG00005015899) #31 ENSGEVG00005015919 GPT2 (ENSGEVG00005015954) #32 C16orf87 (ENSGEVG00005015988) #33 MYLK3 (ENSGEVG00005016013) #34 ORC6 (ENSGEVG00005016083) #35 VPS35 (ENSGEVG00005016109) #36 ENSGEVG00005016209 SHCBP1 (ENSGEVG00005016588) #37 UQCRFS1 (ENSGEVG00005016745) Abingdon island giant tortoise MODERN SPECIES 1204 ENSCABG00000015270 #18 CBLN1 (ENSCABG00000015269) #20 N4BP1 (ENSCABG00000015262) #21 SIAH1 (ENSCABG00000015259) #22 LONP2 (ENSCABG00000015083) #23 ABCC12 (ENSCABG00000015070) #25 PHKB (ENSCABG00000012168) #27 ITFG1 (ENSCABG00000011788) #28 NETO2 (ENSCABG00000011722) #29 Chinese turtle MODERN SPECIES 940 CYLD (ENSPSIG00000008623) #8 SNX20 (ENSPSIG00000009076) #10 NKD1 (ENSPSIG00000009112) #11 BRD7 (ENSPSIG00000010123) #12 ENSPSIG00000010651 #13 ENSPSIG00000010658 #13 TENT4B (ENSPSIG00000010667) #14 HEATR3 (ENSPSIG00000010737) #15 CNEP1R1 (ENSPSIG00000011071) #16 ENSPSIG00000011077 ZNF423 (ENSPSIG00000011110) #18 ENSPSIG00000011186 ENSPSIG00000011190 CBLN1 (ENSPSIG00000011197) #20 N4BP1 (ENSPSIG00000011341) #21 SIAH1 (ENSPSIG00000011346) #22 LONP2 (ENSPSIG00000011349) #23 ABCC12 (ENSPSIG00000011610) #25 PHKB (ENSPSIG00000012180) #27 ITFG1 (ENSPSIG00000012582) #28 NETO2 (ENSPSIG00000013009) #29 DNAJA2 (ENSPSIG00000013452) #31 ENSPSIG00000013516 GPT2 (ENSPSIG00000013523) #32 C16orf87 (ENSPSIG00000013617) #33 MYLK3 (ENSPSIG00000013680) #34 ORC6 (ENSPSIG00000014037) #35 VPS35 (ENSPSIG00000014218) #36 ENSPSIG00000014407 SHCBP1 (ENSPSIG00000014494) #37 ENSPSIG00000001884 Anura ANCESTRAL SPECIES 471 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 Frog MODERN SPECIES 4 mylk3 (ENSXETG00000049471) #34 ENSXETG00000049269 c16orf87 (ENSXETG00000003894) #33 gpt2 (ENSXETG00000003895) #32 cdca9 (ENSXETG00000003906) dnaja2 (ENSXETG00000024999) #31 mcoln2 (ENSXETG00000003908) neto2 (ENSXETG00000003911) #29 itfg1 (ENSXETG00000025004) #28 phkb (ENSXETG00000003918) #27 ENSXETG00000022270 aktip (ENSXETG00000008091) n4bp1 (ENSXETG00000025007) #21 ENSXETG00000044398 ENSXETG00000039235 siah1 (ENSXETG00000008090) #22 lonp2 (ENSXETG00000008089) #23 ENSXETG00000039171 plekhg4 (ENSXETG00000008088) slc9a5 (ENSXETG00000008087) fhod1 (ENSXETG00000007686) ENSXETG00000043585 pllp (ENSXETG00000007683) znrf1 (ENSXETG00000007681) wdr59 (ENSXETG00000007677) fa2h (ENSXETG00000007676) mlkl (ENSXETG00000007675) rfwd3 (ENSXETG00000007674) glg1 (ENSXETG00000025025) pdpr (ENSXETG00000007670) ENSXETG00000007669 Leishan spiny toad MODERN SPECIES 1 COG4 (ENSLLEG00000030449) FCSK (ENSLLEG00000030382) AARS1 (ENSLLEG00000030340) EXOSC6 (ENSLLEG00000030329) ENSLLEG00000030323 ST3GAL2 (ENSLLEG00000030313) ENSLLEG00000030294 PDPR (ENSLLEG00000030249) GLG1 (ENSLLEG00000029926) RFWD3 (ENSLLEG00000029816) MLKL (ENSLLEG00000029739) ENSLLEG00000029706 ENSLLEG00000029496 ENSLLEG00000029471 N4BP1 (ENSLLEG00000029427) #21 SIAH1 (ENSLLEG00000029408) #22 LONP2 (ENSLLEG00000029295) #23 ENSLLEG00000029253 #27 ENSLLEG00000029241 TCF25 (ENSLLEG00000028990) MC1R (ENSLLEG00000028937) ENSLLEG00000028917 ENSLLEG00000028906 ENSLLEG00000028896 ENSLLEG00000028706 DBNDD1 (ENSLLEG00000028667) GAS8 (ENSLLEG00000028536) ENSLLEG00000028458 HAS3 (ENSLLEG00000028431) UTP4 (ENSLLEG00000028327) SNTB2 (ENSLLEG00000028281) Coelacanth MODERN SPECIES 667 N4BP1 (ENSLACG00000014946) #21 SIAH1 (ENSLACG00000014463) #22 LONP2 (ENSLACG00000013534) #23 ABCC12 (ENSLACG00000012588) #25 PDCD5 (ENSLACG00000012401) ENSLACG00000012365 ENSLACG00000012294 ENSLACG00000011462 DPY19L3 (ENSLACG00000010632) ZNF507 (ENSLACG00000010271) ENSLACG00000010174 Actinopterygii ANCESTRAL SPECIES 38 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00960000187150 ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b ENSGT00940000154065.a ENSGT00390000002251 ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A Reedfish DUPLICATION Reedfish DUPLICATION Reedfish MODERN SPECIES 12 ENSECRG00000001354 b4galt4 (ENSECRG00000001378) ENSECRG00000001399 mtmr2 (ENSECRG00000001543) CEP57 (ENSECRG00000001817) fam76b (ENSECRG00000001845) cwc15 (ENSECRG00000001885) AMOTL1 (ENSECRG00000001914) ANKRD49 (ENSECRG00000001941) mre11a (ENSECRG00000001963) GPR83 (ENSECRG00000002001) panx1a (ENSECRG00000002011) HEPH (ENSECRG00000002227) ENSECRG00000003373 ENSECRG00000003391 siah1 (ENSECRG00000003412) #22 trim3b (ENSECRG00000003434) smpd1 (ENSECRG00000003451) ENSECRG00000003461 ENSECRG00000003470 PKNOX1 (ENSECRG00000003484) ilk (ENSECRG00000003496) u2af1 (ENSECRG00000003513) cbsb (ENSECRG00000003539) ENSECRG00000003570 RRP1B (ENSECRG00000003580) ENSECRG00000003596 pdxka (ENSECRG00000003602) agpat3 (ENSECRG00000003615) TRAPPC10 (ENSECRG00000003635) pwp2h (ENSECRG00000003662) Reedfish MODERN SPECIES 11 ENSECRG00000006017 shisa4 (ENSECRG00000005976) LMOD1 (ENSECRG00000005963) timm17a (ENSECRG00000005940) CYB5R1 (ENSECRG00000005919) ENSECRG00000005904 adipor1b (ENSECRG00000005891) KLHL12 (ENSECRG00000005881) rabif (ENSECRG00000005871) ENSECRG00000005859 kdm5ba (ENSECRG00000005836) ipo9 (ENSECRG00000005788) ENSECRG00000005755 rap1aa (ENSECRG00000005733) ENSECRG00000005711 siah1 (ENSECRG00000005705) #22 ENSECRG00000005697 mmut (ENSECRG00000005564) ENSECRG00000005466 cdc5l (ENSECRG00000005435) supt3h (ENSECRG00000005415) runx2a (ENSECRG00000005402) CLIC5 (ENSECRG00000005045) opn8a (ENSECRG00000004945) enpp4 (ENSECRG00000004928) enpp5 (ENSECRG00000004922) fam167aa (ENSECRG00000004917) ENSECRG00000004909 ccm2 (ENSECRG00000004876) xkr6b (ENSECRG00000004849) mtmr9 (ENSECRG00000004828) Reedfish MODERN SPECIES 17 CYLD (ENSECRG00000013689) #8 nod2 (ENSECRG00000013650) #9 SNX20 (ENSECRG00000013637) #10 nkd1 (ENSECRG00000013561) #11 ENSECRG00000013516 ##12 adcy7 (ENSECRG00000013403) #13 tent4b (ENSECRG00000013351) #14 heatr3 (ENSECRG00000013321) #15 cnep1r1 (ENSECRG00000013276) #16 si:ch211-216l23.2 (ENSECRG00000013231) ENSECRG00000013209 ZNF423 (ENSECRG00000013167) #18 si:ch211-212o1.2 (ENSECRG00000013114) cbln1 (ENSECRG00000013095) #20 n4bp1 (ENSECRG00000013073) #21 siah1 (ENSECRG00000013056) #22 lonp2 (ENSECRG00000013033) #23 il34 (ENSECRG00000013016) sf3b3 (ENSECRG00000012961) cog4 (ENSECRG00000012849) FCSK (ENSECRG00000012755) st3gal2 (ENSECRG00000012730) aars1 (ENSECRG00000012691) exosc6 (ENSECRG00000012675) ENSECRG00000012661 ENSECRG00000012474 B3GALT9 (ENSECRG00000012359) psmd5 (ENSECRG00000012320) ENSECRG00000012297 zgc:101858 (ENSECRG00000012270) PPIL3 (ENSECRG00000012237) Neopterygii ANCESTRAL SPECIES 51 ENSGT00390000018123.a.a #8 ENSGT00940000160934 #9 ENSGT00530000063759.a #10 ENSGT00440000033589.c #11 ENSGT00950000183170.a #12 ENSGT00940000159096 #13 ENSGT00940000158301 #14 ENSGT00390000012529 #15 ENSGT00390000008576 #16 ENSGT00530000064134.a.a ENSGT00960000187150 ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b ENSGT00940000154065.a ENSGT00390000002251 ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT01050000244866.C ENSGT00390000010260 ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000157894 ENSGT00500000044916 ENSGT00940000157653 Spotted gar MODERN SPECIES 662 TOX3 (ENSLOCG00000007257) sall1a (ENSLOCG00000007283) CYLD (ENSLOCG00000007312) #8 SNX20 (ENSLOCG00000007326) #10 nkd1 (ENSLOCG00000007336) #11 brd7 (ENSLOCG00000007355) #12 adcy7 (ENSLOCG00000007376) #13 tent4b (ENSLOCG00000007410) #14 heatr3 (ENSLOCG00000007426) #15 cnep1r1 (ENSLOCG00000007445) #16 si:ch211-216l23.2 (ENSLOCG00000007455) ZNF423 (ENSLOCG00000007466) #18 si:ch211-212o1.2 (ENSLOCG00000007493) cbln1 (ENSLOCG00000007512) #20 n4bp1 (ENSLOCG00000007525) #21 siah1 (ENSLOCG00000007536) #22 lonp2 (ENSLOCG00000007553) #23 sf3b3 (ENSLOCG00000007566) cog4 (ENSLOCG00000007581) FCSK (ENSLOCG00000007604) ENSLOCG00000007618 st3gal2 (ENSLOCG00000007629) ENSLOCG00000007641 ENSLOCG00000007654 exosc6 (ENSLOCG00000017597) tmppe (ENSLOCG00000007681) pllp (ENSLOCG00000007690) arl2bp (ENSLOCG00000007707) rspry1 (ENSLOCG00000007716) psme3ip1 (ENSLOCG00000007733) cpne2 (ENSLOCG00000007746) Osteoglossocephalai ANCESTRAL SPECIES ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.e ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00530000064134.a.a ENSGT00960000187150 ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b ENSGT00940000154065.a ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT01050000244866.C ENSGT00390000010260 ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000157894 ENSGT00500000044916 ENSGT00940000157653 ENSGT00940000160652 Clupeocephala ANCESTRAL SPECIES 2 ENSGT00940000153533.b ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00530000064134.a.a ENSGT00960000187150 ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT01050000244866.C ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000157894 ENSGT00500000044916 ENSGT00940000157653 ENSGT00940000160652 ENSGT01100000263545.a.b.d.a ENSGT00390000017671.b Otomorpha ANCESTRAL SPECIES ENSGT00940000153533.b ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00530000064134.a.a ENSGT00960000187150 ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT01050000244866.C ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000157894 ENSGT00500000044916 ENSGT00940000157653 ENSGT00940000160652 ENSGT01100000263545.a.b.d.a ENSGT00390000017671.b Otophysi ANCESTRAL SPECIES 4 ENSGT00950000182967 ENSGT00390000016353 ENSGT00940000155044.B ENSGT00390000017671.b ENSGT01100000263545.a.b.d.a ENSGT00940000160652 ENSGT00940000157653 ENSGT00500000044916 ENSGT00940000157894 ENSGT00530000064134.a.a ENSGT00960000187150 ENSGT00940000158492.b #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT01050000244866.C ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f ENSGT00940000155836.B Characiphysae ANCESTRAL SPECIES 8 ENSGT00950000182967 ENSGT00390000016353 ENSGT00940000155044.B ENSGT00390000017671.b ENSGT01100000263545.a.b.d.a ENSGT00940000160652 ENSGT00940000157653.u ENSGT00500000044916 ENSGT00940000157894 ENSGT00530000064134.a.a ENSGT00940000163703.b ENSGT00940000158492.b #18 ENSGT00960000187150 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT01050000244866.C ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f ENSGT00940000155836.B Characiphysae_b ANCESTRAL SPECIES 4 ENSGT00940000155044.B ENSGT00390000017671.b ENSGT01100000263545.a.b.d.a ENSGT00940000160652 ENSGT00940000157653.v ENSGT01100000263476.B.b.a.a.a.b ENSGT00940000157653.u ENSGT00500000044916 ENSGT00940000157894 ENSGT00530000064134.a.a ENSGT00940000163703.b ENSGT00940000158492.b #18 ENSGT00960000187150 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT01050000244866.C ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f ENSGT00940000155836.B Characoidei ANCESTRAL SPECIES 30 ENSGT00950000182967 ENSGT00390000016353 ENSGT00940000155044.B ENSGT00390000017671.b ENSGT01100000263545.a.b.d.a ENSGT00940000160652 ENSGT01100000263476.B.b.a.a.a.b ENSGT00940000157653.u ENSGT00500000044916 ENSGT00940000157894 ENSGT00530000064134.a.a ENSGT00940000163703.b ENSGT00940000158492.b #18 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT01050000244866.C ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f ENSGT00940000155836.B Red-bellied piranha DUPLICATION Red-bellied piranha MODERN SPECIES 2908 siah1 (ENSPNAG00000005723) #22 Red-bellied piranha MODERN SPECIES B3GNT9 (ENSPNAG00000016652) bbs2 (ENSPNAG00000005140) nup93 (ENSPNAG00000016530) slc12a3 (ENSPNAG00000016514) herpud1 (ENSPNAG00000016400) cetp (ENSPNAG00000016378) nlrc5 (ENSPNAG00000005083) cpne2 (ENSPNAG00000015888) psme3ip1 (ENSPNAG00000015836) rspry1 (ENSPNAG00000015819) si:ch211-216l23.2 (ENSPNAG00000015729) si:ch211-212o1.2 (ENSPNAG00000015706) znf423 (ENSPNAG00000015599) #18 cbln1 (ENSPNAG00000003394) #20 n4bp1 (ENSPNAG00000015520) #21 siah1 (ENSPNAG00000015510) #22 lonp2 (ENSPNAG00000015490) #23 il34 (ENSPNAG00000015434) sf3b3 (ENSPNAG00000015419) st3gal2 (ENSPNAG00000015314) aars1 (ENSPNAG00000015269) ENSPNAG00000015237 pllp (ENSPNAG00000015182) arl2bp (ENSPNAG00000015169) arih1 (ENSPNAG00000015135) ENSPNAG00000015080 ppcdc (ENSPNAG00000015060) hacd3 (ENSPNAG00000015056) ints14 (ENSPNAG00000015024) SLC24A1 (ENSPNAG00000003338) dennd4a (ENSPNAG00000014917) Mexicana tetra MODERN SPECIES 9 nup93 (ENSAMXG00000003669) slc12a3 (ENSAMXG00000003658) herpud1 (ENSAMXG00000030407) cetp (ENSAMXG00000003656) ENSAMXG00000003651 ENSAMXG00000035089 cpne2 (ENSAMXG00000003597) psme3ip1 (ENSAMXG00000043696) rspry1 (ENSAMXG00000003559) si:ch211-216l23.2 (ENSAMXG00000003546) si:ch211-212o1.2 (ENSAMXG00000038315) znf423 (ENSAMXG00000003519) #18 ENSAMXG00000032296 cbln1 (ENSAMXG00000041854) #20 n4bp1 (ENSAMXG00000029866) #21 siah1 (ENSAMXG00000040928) #22 lonp2 (ENSAMXG00000003436) #23 il34 (ENSAMXG00000029682) sf3b3 (ENSAMXG00000003410) st3gal2 (ENSAMXG00000003386) aars1 (ENSAMXG00000003368) ENSAMXG00000003354 pllp (ENSAMXG00000037550) arl2bp (ENSAMXG00000039327) arih1 (ENSAMXG00000003281) ENSAMXG00000003257 ppcdc (ENSAMXG00000038023) hacd3 (ENSAMXG00000036622) ints14 (ENSAMXG00000003207) SLC24A1 (ENSAMXG00000003180) dennd4a (ENSAMXG00000003173) Electric eel MODERN SPECIES 460 cbln1 (ENSEEEG00000014639) #20 n4bp1 (ENSEEEG00000014642) #21 siah1 (ENSEEEG00000014645) #22 lonp2 (ENSEEEG00000014648) #23 il34 (ENSEEEG00000014649) sf3b3 (ENSEEEG00000014658) st3gal2 (ENSEEEG00000014681) aars1 (ENSEEEG00000014683) ENSEEEG00000014695 pllp (ENSEEEG00000014746) arl2bp (ENSEEEG00000014748) arih1 (ENSEEEG00000014749) ENSEEEG00000014751 Channel catfish MODERN SPECIES 23 mt2 (ENSIPUG00000019287) nup93 (ENSIPUG00000019319) slc12a3 (ENSIPUG00000019448) herpud1 (ENSIPUG00000019543) cetp (ENSIPUG00000019568) nlrc5 (ENSIPUG00000019679) cpne2 (ENSIPUG00000020071) fam192a (ENSIPUG00000020154) Rspry1 (ENSIPUG00000020177) si:ch211-216l23.2 (ENSIPUG00000020235) si:ch211-212o1.2 (ENSIPUG00000020256) znf423 (ENSIPUG00000020274) #18 cbln1 (ENSIPUG00000020331) #20 ENSIPUG00000020342 n4bp1 (ENSIPUG00000020354) #21 siah1 (ENSIPUG00000020372) #22 lonp2 (ENSIPUG00000020393) #23 il34 (ENSIPUG00000020427) sf3b3 (ENSIPUG00000020435) st3gal2 (ENSIPUG00000020529) aars (ENSIPUG00000020538) ENSIPUG00000020630 pllp (ENSIPUG00000020662) arl2bp (ENSIPUG00000020669) arih1 (ENSIPUG00000020676) c4h15orf39 (ENSIPUG00000021229) ppcdc (ENSIPUG00000021242) hacd3 (ENSIPUG00000021269) vwa9 (ENSIPUG00000021289) slc24a1 (ENSIPUG00000021316) dennd4a (ENSIPUG00000021338) Cyprinoidei ANCESTRAL SPECIES 10 ENSGT00390000016353 ENSGT00940000155044.B ENSGT00390000017671.b ENSGT01100000263545.a.b.d.a ENSGT00940000160652 ENSGT00940000157653 ENSGT00500000044916 ENSGT00940000157894 ENSGT00530000064134.a.a ENSGT00940000158492.b.b.b #18 ENSGT00960000187150 ENSGT00940000158492.b.b.a #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT01050000244866.C ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f ENSGT00940000155836.B Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 123 ENSGT00950000182967.p ENSGT00390000016353.q ENSGT00940000155044.B.h ENSGT00390000017671.b.l ENSGT00940000160652.a.b ENSGT00940000157653.s ENSGT00500000044916.ab ENSGT00940000157894.h ENSGT00530000064134.a.a.c ENSGT00940000158492.b.b.b.b #18 ENSGT00960000187150 ENSGT00940000158492.b.b.a #18 ENSGT00940000163703.b.c ENSGT00940000159811.h #20 ENSGT00940000158682.c #21 ENSGT00940000154837.k #22 ENSGT00530000063553.b.b.d #23 ENSGT00940000168336.c ENSGT00950000183151.a.a.b.b.i ENSGT00940000156356.d ENSGT00940000157335.l ENSGT01050000244866.C.b ENSGT00940000156011.`b ENSGT00390000015052.b ENSGT00940000155744.g.a ENSGT00940000169185.a ENSGT00440000038107.o ENSGT00530000062962.b.a.f.a ENSGT00390000009486.e ENSGT01030000234532.B.e.b.f.b ENSGT00940000155836.B.c Goldfish MODERN SPECIES 37 zfpm1 (ENSCARG00000067133) kiaa0513 (ENSCARG00000067086) foxl1 (ENSCARG00000067076) phaf1 (ENSCARG00000066763) mt (ENSCARG00000066625) herpud1 (ENSCARG00000066596) cpne2 (ENSCARG00000065927) psme3ip1 (ENSCARG00000065882) rspry1 (ENSCARG00000065846) si:ch211-216l23.2 (ENSCARG00000065838) ENSCARG00000065826 znf423 (ENSCARG00000065792) #18 si:ch211-212o1.2 (ENSCARG00000065783) cbln1 (ENSCARG00000065779) #20 n4bp1 (ENSCARG00000065774) #21 siah1 (ENSCARG00000065769) #22 lonp2 (ENSCARG00000065548) #23 il34 (ENSCARG00000065462) sf3b3 (ENSCARG00000065369) st3gal2 (ENSCARG00000065325) aars1 (ENSCARG00000065093) ENSCARG00000064321 pllp (ENSCARG00000064293) arl2bp (ENSCARG00000064261) arih1 (ENSCARG00000063977) ENSCARG00000063954 ppcdc (ENSCARG00000063932) hacd3 (ENSCARG00000063827) ints14 (ENSCARG00000063746) SLC24A1 (ENSCARG00000063727) dennd4a (ENSCARG00000062471) Cyprininae_a ANCESTRAL SPECIES 131 ENSGT00940000153528.a.a.d ENSGT00940000162243.f ENSGT00950000182967.p ENSGT00390000016353.q ENSGT00940000155044.B.h ENSGT00390000017671.b.l ENSGT00940000160652.a.b ENSGT00940000157653.s ENSGT00500000044916.ab ENSGT00940000157894.h ENSGT00530000064134.a.a.c ENSGT00940000158492.b.b.b.b #18 ENSGT00940000163703.b.c ENSGT00940000159811.h #20 ENSGT00940000158682.c #21 ENSGT00940000154837.k #22 ENSGT00530000063553.b.b.d #23 ENSGT00940000168336.c ENSGT00950000183151.a.a.b.b.i ENSGT00940000156356.d ENSGT00940000157335.l ENSGT01050000244866.C.b ENSGT00940000156011.`b ENSGT00390000015052.b ENSGT00940000155744.g.a ENSGT00940000169185.a ENSGT00440000038107.o ENSGT00530000062962.b.a.f.a ENSGT00390000009486.e ENSGT01030000234532.B.e.b.f.b ENSGT00940000155836.B.c Common carp reference MODERN SPECIES 9 foxl1 (ENSCCRG00000030167) phaf1 (ENSCCRG00000030147) bbs2 (ENSCCRG00000029334) nup93 (ENSCCRG00000029280) herpud1 (ENSCCRG00000015768) ENSCCRG00000068018 NLRC5 (ENSCCRG00000014861) cpne2 (ENSCCRG00000006043) psme3ip1 (ENSCCRG00000063767) rspry1 (ENSCCRG00000078907) si:ch211-216l23.2 (ENSCCRG00000080274) ZNF423 (ENSCCRG00000078744) #18 si:ch211-212o1.2 (ENSCCRG00000080717) cbln1 (ENSCCRG00000077181) #20 n4bp1 (ENSCCRG00000061978) #21 siah1 (ENSCCRG00000072198) #22 lonp2 (ENSCCRG00000034928) #23 il34 (ENSCCRG00000060641) sf3b3 (ENSCCRG00000024068) st3gal2 (ENSCCRG00000076295) aars1 (ENSCCRG00000005376) ENSCCRG00000006513 pllp (ENSCCRG00000005176) arl2bp (ENSCCRG00000005183) arih1 (ENSCCRG00000025952) ENSCCRG00000081007 ppcdc (ENSCCRG00000018299) hacd3 (ENSCCRG00000017852) ints14 (ENSCCRG00000047151) SLC24A1 (ENSCCRG00000066083) dennd4a (ENSCCRG00000020231) Golden-line barbel MODERN SPECIES 5088 siah1 (ENSSGRG00000003996) #22 Cyprininae ANCESTRAL SPECIES 74 ENSGT00390000017113 ENSGT00950000182967.o ENSGT00390000016353.r ENSGT00940000155044.B.g ENSGT00390000017671.b.k ENSGT01100000263545.a.b.d.a ENSGT00940000160652.a.a ENSGT00940000157653.t ENSGT00500000044916.`b ENSGT00940000157894.g ENSGT00530000064134.a.a.d ENSGT00940000158492.b.b.b.a.b #18 ENSGT00940000163703.b.d ENSGT00940000159811.g #20 ENSGT00940000158682.d #21 ENSGT00940000154837.l #22 ENSGT00530000063553.b.b.c #23 ENSGT00940000168336.d ENSGT00950000183151.a.a.b.b.j ENSGT00940000156356.c ENSGT00940000157335.k ENSGT01050000244866.C.a ENSGT00940000156011.ab ENSGT00390000015052.a ENSGT00940000155744.g.b ENSGT00940000169185.b ENSGT00440000038107.p ENSGT00530000062962.b.a.f.b ENSGT00390000009486.f ENSGT01030000234532.B.e.b.f.a ENSGT00940000155836.B.d Cyprininae_a ANCESTRAL SPECIES 15 ENSGT00940000162243.e ENSGT00390000017113 ENSGT00390000016353.r ENSGT00940000155044.B.g ENSGT00390000017671.b.k ENSGT01100000263545.a.b.d.a ENSGT00940000160652.a.a ENSGT00940000157653.t ENSGT00500000044916.`b ENSGT00940000157894.g ENSGT00530000064134.a.a.d ENSGT00940000158492.b.b.a #18 ENSGT00940000163703.b.d ENSGT00940000159811.g #20 ENSGT00940000158682.d #21 ENSGT00940000154837.l #22 ENSGT00530000063553.b.b.c #23 ENSGT00940000168336.d ENSGT00950000183151.a.a.b.b.j ENSGT00940000156356.c ENSGT00940000157335.k ENSGT01050000244866.C.a ENSGT00940000156011.ab ENSGT00390000015052.a ENSGT00940000155744.g.b ENSGT00940000169185.b ENSGT00440000038107.p ENSGT00530000062962.b.a.f.b ENSGT00390000009486.f ENSGT01030000234532.B.e.b.f.a ENSGT00940000155836.B.d Golden-line barbel MODERN SPECIES 376 nup93 (ENSSGRG00000026278) slc12a3 (ENSSGRG00000027397) herpud1 (ENSSGRG00000027398) ENSSGRG00000027400 ENSSGRG00000027406 ENSSGRG00000027618 cpne2 (ENSSGRG00000027619) psme3ip1 (ENSSGRG00000027620) rspry1 (ENSSGRG00000027624) ENSSGRG00000027892 si:ch211-216l23.2 (ENSSGRG00000027891) ZNF423 (ENSSGRG00000027893) #18 si:ch211-212o1.2 (ENSSGRG00000027894) cbln1 (ENSSGRG00000027896) #20 n4bp1 (ENSSGRG00000027902) #21 siah1 (ENSSGRG00000027903) #22 lonp2 (ENSSGRG00000027904) #23 il34 (ENSSGRG00000028134) sf3b3 (ENSSGRG00000028143) st3gal2 (ENSSGRG00000028160) aars1 (ENSSGRG00000028189) ENSSGRG00000029146 pllp (ENSSGRG00000029156) arl2bp (ENSSGRG00000029157) arih1 (ENSSGRG00000029159) ENSSGRG00000029172 fbln1 (ENSSGRG00000029184) ENSSGRG00000029294 MON2 (ENSSGRG00000029302) ppm1h (ENSSGRG00000029623) avpr1aa (ENSSGRG00000029628) Common carp reference MODERN SPECIES 19 phaf1 (ENSCCRG00000053484) ENSCCRG00000073396 nup93 (ENSCCRG00000039603) slc12a3 (ENSCCRG00000037360) herpud1 (ENSCCRG00000037277) cetp (ENSCCRG00000037266) NLRC5 (ENSCCRG00000037228) cpne2 (ENSCCRG00000033807) psme3ip1 (ENSCCRG00000005874) rspry1 (ENSCCRG00000003628) si:ch211-216l23.2 (ENSCCRG00000003588) znf423 (ENSCCRG00000039463) #18 si:ch211-212o1.2 (ENSCCRG00000055857) cbln1 (ENSCCRG00000081095) #20 n4bp1 (ENSCCRG00000029198) #21 siah1 (ENSCCRG00000073445) #22 lonp2 (ENSCCRG00000070534) #23 il34 (ENSCCRG00000025227) sf3b3 (ENSCCRG00000026756) st3gal2 (ENSCCRG00000077284) aars1 (ENSCCRG00000004748) ENSCCRG00000005086 arl2bp (ENSCCRG00000058906) arih1 (ENSCCRG00000005206) ENSCCRG00000071734 ppcdc (ENSCCRG00000072999) hacd3 (ENSCCRG00000047136) ints14 (ENSCCRG00000017792) SLC24A1 (ENSCCRG00000009282) ENSCCRG00000072431 dennd4a (ENSCCRG00000009528) Goldfish MODERN SPECIES 9 bbs2 (ENSCARG00000059164) mt2 (ENSCARG00000059276) nup93 (ENSCARG00000059341) slc12a3 (ENSCARG00000059929) herpud1 (ENSCARG00000062329) cetp (ENSCARG00000062369) NLRC5 (ENSCARG00000062617) cpne2 (ENSCARG00000063858) psme3ip1 (ENSCARG00000064311) rspry1 (ENSCARG00000064320) si:ch211-216l23.2 (ENSCARG00000010946) ZNF423 (ENSCARG00000010957) #18 si:ch211-212o1.2 (ENSCARG00000011103) cbln1 (ENSCARG00000011105) #20 n4bp1 (ENSCARG00000011117) #21 siah1 (ENSCARG00000011126) #22 lonp2 (ENSCARG00000011141) #23 il34 (ENSCARG00000011515) sf3b3 (ENSCARG00000011537) st3gal2 (ENSCARG00000011584) aars1 (ENSCARG00000011630) ENSCARG00000011736 pllp (ENSCARG00000011891) arl2bp (ENSCARG00000011894) arih1 (ENSCARG00000011916) ENSCARG00000011988 ppcdc (ENSCARG00000011991) hacd3 (ENSCARG00000012002) ints14 (ENSCARG00000012147) SLC24A1 (ENSCARG00000012194) dennd4a (ENSCARG00000012263) Zebrafish MODERN SPECIES 9 nup93 (ENSDARG00000003487) slc12a3 (ENSDARG00000013855) herpud1 (ENSDARG00000024314) cetp (ENSDARG00000030872) nlrc5 (ENSDARG00000024631) cpne2 (ENSDARG00000007753) psme3ip1 (ENSDARG00000041631) rspry1 (ENSDARG00000062558) si:ch211-216l23.2 (ENSDARG00000069122) znf423 (ENSDARG00000059707) #18 ENSDARG00000095732 #18 si:ch211-212o1.2 (ENSDARG00000011498) ENSDARG00000112014 cbln1 (ENSDARG00000057296) #20 n4bp1 (ENSDARG00000057491) #21 siah1 (ENSDARG00000030871) #22 lonp2 (ENSDARG00000101438) #23 il34 (ENSDARG00000091003) sf3b3 (ENSDARG00000103553) st3gal2 (ENSDARG00000112898) aars1 (ENSDARG00000069142) ENSDARG00000093381 pllp (ENSDARG00000062756) arl2bp (ENSDARG00000025383) arih1 (ENSDARG00000003616) ENSDARG00000069168 ppcdc (ENSDARG00000033020) hacd3 (ENSDARG00000016038) ints14 (ENSDARG00000041429) SLC24A1 (ENSDARG00000041431) dennd4a (ENSDARG00000062721) Clupeiformes ANCESTRAL SPECIES 71 ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00530000064134.a.a ENSGT00960000187150 ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000153212.y.a ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00390000007739 ENSGT00940000160745.d ENSGT00940000164715.b ENSGT01060000248595.b.a.b.a.n.a ENSGT00440000039564.a.b.i ENSGT00940000159535.i ENSGT00990000203615.a.a.a.b.d ENSGT00940000156626 ENSGT00950000183002.A.f ENSGT00920000149457 ENSGT00950000182959.b.b ENSGT00940000158477.a.b.a Denticle herring MODERN SPECIES 8 CDH13 (ENSDCDG00000018612) ENSDCDG00000018610 ENSDCDG00000018608 si:ch211-216l23.2 (ENSDCDG00000018606) ENSDCDG00000018605 znf423 (ENSDCDG00000018514) #18 si:ch211-212o1.2 (ENSDCDG00000018511) cbln1 (ENSDCDG00000018508) #20 ENSDCDG00000017955 ENSDCDG00000017101 ENSDCDG00000017098 ENSDCDG00000014908 ENSDCDG00000014883 ENSDCDG00000014881 n4bp1 (ENSDCDG00000014880) #21 siah1 (ENSDCDG00000014878) #22 ENSDCDG00000014877 il34 (ENSDCDG00000014875) sf3b3 (ENSDCDG00000014868) mrpl23 (ENSDCDG00000014864) igf2b (ENSDCDG00000014862) ENSDCDG00000014858 ENSDCDG00000013856 ENSDCDG00000013798 phlda2 (ENSDCDG00000013795) OSBPL5 (ENSDCDG00000008088) ENSDCDG00000007814 dusp8a (ENSDCDG00000007781) mob2a (ENSDCDG00000007735) kcnj11 (ENSDCDG00000007731) abcc8 (ENSDCDG00000007647) Atlantic herring MODERN SPECIES 19 ranbp10 (ENSCHAG00000014310) pard6a (ENSCHAG00000014274) zgc:158868 (ENSCHAG00000014261) ripor1 (ENSCHAG00000013125) ctcf (ENSCHAG00000012414) carmil2 (ENSCHAG00000012182) tmem170a (ENSCHAG00000012161) cfdp1 (ENSCHAG00000012151) bcar1 (ENSCHAG00000012134) ENSCHAG00000012099 ENSCHAG00000012073 NUDT21 (ENSCHAG00000012056) ENSCHAG00000012032 nudt21 (ENSCHAG00000011942) n4bp1 (ENSCHAG00000011931) #21 siah1 (ENSCHAG00000011918) #22 lonp2 (ENSCHAG00000010871) #23 il34 (ENSCHAG00000010849) sf3b3 (ENSCHAG00000010639) mrpl23 (ENSCHAG00000010615) igf2b (ENSCHAG00000010568) ENSCHAG00000010499 CPT1A (ENSCHAG00000008928) ENSCHAG00000008842 phlda2 (ENSCHAG00000008832) OSBPL5 (ENSCHAG00000007848) zgc:77748 (ENSCHAG00000007808) ENSCHAG00000007790 smpd3 (ENSCHAG00000007772) ENSCHAG00000007731 mterf2 (ENSCHAG00000007688) Euteleosteomorpha ANCESTRAL SPECIES 1 ENSGT00940000153533.b ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00530000064134.a.a ENSGT00960000187150 ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT01050000244866.C ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000157894 ENSGT00500000044916 ENSGT00940000157653 ENSGT00940000160652 ENSGT01100000263545.a.b.d.a ENSGT00390000017671.b Acanthomorphata ANCESTRAL SPECIES 193 ENSGT00940000163301.c.a.b ENSGT00940000153577.C ENSGT00390000014869 ENSGT00530000064134.a.a ENSGT00960000187150 ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT01050000244866.C ENSGT00940000179140 ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000157894 ENSGT00940000168208 ENSGT00390000008673 Euacanthomorphacea ANCESTRAL SPECIES 7 ENSGT00940000155883.a.b.b ENSGT00940000155883.a.b.a.a ENSGT00390000018132 ENSGT00940000153528.a.a ENSGT00940000162243 ENSGT00390000017113 ENSGT00940000163301.c.a.b ENSGT00940000153577.C ENSGT00390000014869 ENSGT00530000064134.a.a ENSGT00960000187150 ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT01050000244866.C ENSGT00940000179140 ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000157894 ENSGT00940000168208 ENSGT00390000008673 ENSGT00390000002197 ENSGT00550000075101.r Percomorphaceae ANCESTRAL SPECIES 4 ENSGT00940000155883.a.a ENSGT00940000155883.a.b.b ENSGT00940000155883.a.b.a.a ENSGT00390000018132 ENSGT00940000153528.a.a ENSGT00940000162243 ENSGT00390000017113 ENSGT00940000153577.C ENSGT00390000014869 ENSGT00530000064134.a.a ENSGT00960000187150 ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT00940000179140 ENSGT01050000244866.C ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000157894 ENSGT00940000168208 ENSGT00390000008673 ENSGT00390000002197 ENSGT00550000075101.r Tiger tail seahorse MODERN SPECIES 364 ENSHCOG00000011458 ENSHCOG00000011467 ENSHCOG00000011476 ENSHCOG00000011484 FGL2 (ENSHCOG00000011510) RSBN1L (ENSHCOG00000011527) TMEM60 (ENSHCOG00000011534) PRR5 (ENSHCOG00000011577) rad52 (ENSHCOG00000011594) ENSHCOG00000011622 erc1a (ENSHCOG00000011683) fbxl14a (ENSHCOG00000011704) ENSHCOG00000011785 DYNLRB2 (ENSHCOG00000011800) n4bp1 (ENSHCOG00000011807) #21 siah1 (ENSHCOG00000011819) #22 lonp2 (ENSHCOG00000011871) #23 il34 (ENSHCOG00000011896) sf3b3 (ENSHCOG00000011981) st3gal2 (ENSHCOG00000012009) aars1 (ENSHCOG00000012089) exosc6 (ENSHCOG00000012112) mcl1b (ENSHCOG00000012125) ENSHCOG00000012165 PLLP (ENSHCOG00000012182) arl2bp (ENSHCOG00000012200) rspry1 (ENSHCOG00000012256) ENSHCOG00000012269 anapc13 (ENSHCOG00000012282) sc5d (ENSHCOG00000012299) mt2 (ENSHCOG00000012314) Percomorphaceae_B ANCESTRAL SPECIES 5 ENSGT00940000155883.a.b.b ENSGT00940000155883.a.b.a.a ENSGT00390000018132 ENSGT00940000153528.a.a ENSGT00940000162243 ENSGT00390000017113 ENSGT00940000153577.C ENSGT00390000014869 ENSGT00940000179157 ENSGT00530000064134.a.a ENSGT00960000187150 ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT00500000044916 ENSGT00940000157653 ENSGT00940000160652 ENSGT01010000222686 ENSGT00940000166578 ENSGT00940000165046.b ENSGT00950000183108.b.a.a.i.b ENSGT00950000182991.A.a.c.b ENSGT00940000163228 Ovalentaria ANCESTRAL SPECIES 7 ENSGT00940000155883.a.a ENSGT00940000155883.a.b.b ENSGT00940000155883.a.b.a.a ENSGT00390000018132 ENSGT00940000153528.a.a ENSGT00940000162243 ENSGT00390000017113 ENSGT00940000153577.C ENSGT00390000014869 ENSGT00940000179157 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT00500000044916 ENSGT00940000157653 ENSGT00940000160652 ENSGT00940000163461.a.a.a.b.c.g ENSGT01010000222686 ENSGT00940000164626.b.b.d.s ENSGT00940000166578 ENSGT00940000165046.b ENSGT00950000183108.b.a.a.i.b Atherinomorphae ANCESTRAL SPECIES 5 ENSGT00940000158063 ENSGT00940000155883.a.a ENSGT00940000155883.a.b.a.a ENSGT00390000018132 ENSGT00940000153528.a.a ENSGT00940000162243 ENSGT00390000017113 ENSGT00940000153577.C ENSGT00390000014869 ENSGT00940000179157 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT00500000044916 ENSGT00940000157653 ENSGT00940000160652 ENSGT00940000163461.a.a.a.b.c.g ENSGT00940000166578 ENSGT00940000165046.b ENSGT00950000183108.b.a.a.i.b ENSGT00950000182991.A.a.c.b ENSGT00940000163228 Oryzias ANCESTRAL SPECIES 35 ENSGT00390000018220 ENSGT01050000244866.C ENSGT00940000163301.d.a.a.c.b.b.a ENSGT00940000163301.d.a.a.c.b.a ENSGT00940000163301.d.a.a.c.a ENSGT00940000158063 ENSGT00940000153528.a.a ENSGT00390000018132 ENSGT00940000155883.a.b.a.a ENSGT00390000014869 ENSGT00960000187150 ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335.n ENSGT00940000153348.A ENSGT00500000044916 ENSGT00940000157653 ENSGT00940000160652 ENSGT00940000163461.a.a.a.b.c.g ENSGT00940000166578 ENSGT00940000165046.b ENSGT00950000183108.b.a.a.i.b ENSGT00950000182991.A.a.c.b ENSGT00940000163228 Oryzias_a ANCESTRAL SPECIES 1 ENSGT00940000155273 ENSGT00390000018220 ENSGT01050000244866.C ENSGT00940000163301.d.a.a.c.b.b.a ENSGT00940000163301.d.a.a.c.b.a ENSGT00940000158063 ENSGT00940000153528.a.a ENSGT00390000018132 ENSGT00940000155883.a.b.a.a ENSGT00390000014869 ENSGT00960000187150 ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335.n ENSGT00940000153348.A ENSGT00500000044916 ENSGT00940000157653 ENSGT00940000160652 ENSGT00940000166578 ENSGT00940000165046.b ENSGT00950000183108.b.a.a.i.b ENSGT00950000182991.A.a.c.b ENSGT00940000163228 ENSGT00950000183131.b.b Chinese medaka MODERN SPECIES 123 GAN (ENSOSIG00000019438) CMIP (ENSOSIG00000019211) ENSOSIG00000019129 ENSOSIG00000019024 ENSOSIG00000018988 hsf4 (ENSOSIG00000018975) phaf1 (ENSOSIG00000018944) cbfb (ENSOSIG00000018930) ENSOSIG00000018916 ENSOSIG00000018913 ENSOSIG00000018911 cnot1 (ENSOSIG00000018890) si:ch211-212o1.2 (ENSOSIG00000018341) cbln1 (ENSOSIG00000018337) #20 n4bp1 (ENSOSIG00000018333) #21 siah1 (ENSOSIG00000018327) #22 lonp2 (ENSOSIG00000018264) #23 il34 (ENSOSIG00000018241) sf3b3 (ENSOSIG00000018202) st3gal2 (ENSOSIG00000018191) AARS1 (ENSOSIG00000018183) exosc6 (ENSOSIG00000018178) cpne2 (ENSOSIG00000011634) ENSOSIG00000011453 ENSOSIG00000011452 calb2a (ENSOSIG00000011448) pnp6 (ENSOSIG00000011444) necab2 (ENSOSIG00000011437) SLC38A8 (ENSOSIG00000011435) mbtps1 (ENSOSIG00000010555) pskh1 (ENSOSIG00000010551) Japanese Medaka HdrR MODERN SPECIES 20 ENSORLG00000013811 ENSORLG00000019947 ENSORLG00000027041 ENSORLG00000023654 hsf4 (ENSORLG00000013768) ENSORLG00000013837 phaf1 (ENSORLG00000030399) cbfb (ENSORLG00000024937) gnao1a (ENSORLG00000013739) cnot1 (ENSORLG00000013734) ENSORLG00000025243 znf423 (ENSORLG00000013673) #18 si:ch211-212o1.2 (ENSORLG00000026020) cbln1 (ENSORLG00000013593) #20 n4bp1 (ENSORLG00000027201) #21 siah1 (ENSORLG00000013569) #22 lonp2 (ENSORLG00000013529) #23 il34 (ENSORLG00000028998) sf3b3 (ENSORLG00000013472) st3gal2 (ENSORLG00000013421) aars1 (ENSORLG00000013398) exosc6 (ENSORLG00000013325) psme3ip1 (ENSORLG00000013311) cpne2 (ENSORLG00000013257) ENSORLG00000013082 ENSORLG00000027185 si:dkey-12e7.4 (ENSORLG00000013045) calb2a (ENSORLG00000013038) pnp6 (ENSORLG00000012988) ENSORLG00000012964 ENSORLG00000029147 Oryzias_b ANCESTRAL SPECIES ENSGT01050000244866.C ENSGT00940000163301.d.a.a.c.b.b.b.b ENSGT00940000163301.d.a.a.c.b.b.b.a ENSGT00940000163301.d.a.a.c.b.b.a ENSGT00940000163301.d.a.a.c.b.a ENSGT00940000163301.d.a.a.c.a ENSGT00940000158063 ENSGT00940000153528.a.a ENSGT00390000018132 ENSGT00940000155883.a.b.a.a ENSGT00390000014869 ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335.n ENSGT00940000153348.A ENSGT00500000044916 ENSGT00940000157653 ENSGT00940000160652 ENSGT00940000163461.a.a.a.b.c.g ENSGT00940000166578 ENSGT00940000165046.b ENSGT00950000183108.b.a.a.i.b ENSGT00950000182991.A.a.c.b ENSGT00940000163228 Indian medaka MODERN SPECIES 15 ENSOMEG00000015594 ENSOMEG00000015441 ENSOMEG00000015419 ENSOMEG00000015376 hsf4 (ENSOMEG00000015331) phaf1 (ENSOMEG00000015279) cbfb (ENSOMEG00000015215) gnao1a (ENSOMEG00000000385) cnot1 (ENSOMEG00000015124) znf423 (ENSOMEG00000000376) #18 si:ch211-212o1.2 (ENSOMEG00000014726) cbln1 (ENSOMEG00000014702) #20 ENSOMEG00000014695 ENSOMEG00000014679 n4bp1 (ENSOMEG00000014670) #21 siah1 (ENSOMEG00000000362) #22 lonp2 (ENSOMEG00000014608) #23 il34 (ENSOMEG00000014555) ENSOMEG00000014517 ENSOMEG00000000861 sf3b3 (ENSOMEG00000014483) st3gal2 (ENSOMEG00000014397) aars1 (ENSOMEG00000014361) exosc6 (ENSOMEG00000014317) psme3ip1 (ENSOMEG00000014279) cpne2 (ENSOMEG00000014196) ENSOMEG00000014149 ENSOMEG00000014116 ENSOMEG00000014025 ENSOMEG00000013940 ENSOMEG00000013833 Javanese ricefish MODERN SPECIES 20 GAN (ENSOJAG00000007196) ENSOJAG00000006855 ENSOJAG00000006833 ENSOJAG00000006825 ENSOJAG00000006373 ENSOJAG00000006224 ENSOJAG00000006060 hsf4 (ENSOJAG00000005982) phaf1 (ENSOJAG00000005851) cbfb (ENSOJAG00000005661) ENSOJAG00000014878 znf423 (ENSOJAG00000014040) #18 si:ch211-212o1.2 (ENSOJAG00000014000) cbln1 (ENSOJAG00000013954) #20 n4bp1 (ENSOJAG00000013938) #21 siah1 (ENSOJAG00000013917) #22 lonp2 (ENSOJAG00000013782) #23 il34 (ENSOJAG00000013763) ENSOJAG00000013759 ENSOJAG00000013753 sf3b3 (ENSOJAG00000013502) st3gal2 (ENSOJAG00000013450) aars1 (ENSOJAG00000013195) exosc6 (ENSOJAG00000013161) psme3ip1 (ENSOJAG00000013149) cpne2 (ENSOJAG00000012192) ENSOJAG00000011827 ENSOJAG00000009956 ENSOJAG00000009824 si:dkey-12e7.4 (ENSOJAG00000009812) calb2a (ENSOJAG00000009653) Cyprinodontiformes ANCESTRAL SPECIES 6 ENSGT00940000158063 ENSGT00940000155883.a.a ENSGT00940000155883.a.b.a.a ENSGT00390000018132 ENSGT00940000153528.a.a ENSGT00940000162243 ENSGT00390000017113 ENSGT00940000153577.C ENSGT00390000014869 ENSGT00940000179157 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT00500000044916 ENSGT00940000170707 ENSGT00730000111190 ENSGT01100000263484.B.a ENSGT00530000063823.b.a ENSGT00940000166187 ENSGT00390000009535 ENSGT00940000162251 ENSGT00940000175365 Cyprinodontoidei ANCESTRAL SPECIES 47 ENSGT00390000006218 ENSGT00940000157398.i.b ENSGT00390000006548.a.b.b ENSGT00390000018319.a.a.a.b.c ENSGT00940000164795 ENSGT00950000182940.b.a.a.g.a ENSGT00940000154876.a.b.b ENSGT00940000154876.a.b.a ENSGT00390000004930 ENSGT00950000183093.B.a.a ENSGT00390000014757 ENSGT00390000012935 ENSGT00940000157089.A ENSGT00940000159073 ENSGT01050000245029 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT00940000162251 ENSGT00390000009535 ENSGT00940000166187 ENSGT00530000063823.b.a ENSGT01100000263484.B.a ENSGT00730000111190 ENSGT00940000170707 ENSGT00500000044916 ENSGT00390000004877 Poeciliinae ANCESTRAL SPECIES 3 ENSGT00390000006218 ENSGT00940000157398.i.b ENSGT00390000006548.a.b.b ENSGT00390000018319.a.a.a.b.c ENSGT00940000164795 ENSGT00950000182940.b.a.a.g.a ENSGT00940000154876.a.b.b ENSGT00940000154876.a.b.a ENSGT00390000004930 ENSGT00950000183093.B.a.a ENSGT00390000014757 ENSGT00390000012935 ENSGT00940000157089.A ENSGT00940000159073 ENSGT01050000245029 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT00940000162251 ENSGT00390000009535 ENSGT00940000166187 ENSGT00530000063823.b.a ENSGT01100000263484.B.a ENSGT00730000111190 ENSGT00940000170707 ENSGT00500000044916 ENSGT00390000004877 Poecilia ANCESTRAL SPECIES 39 ENSGT00390000000062 ENSGT00390000006218 ENSGT00940000157398.i.b ENSGT00390000006548.a.b.b ENSGT00390000018319.a.a.a.b.c ENSGT00940000164795 ENSGT00950000182940.b.a.a.g.a ENSGT00940000154876.a.b.b ENSGT00940000154876.a.b.a ENSGT00390000004930 ENSGT00950000183093.B.a.a ENSGT00390000014757 ENSGT00390000012935 ENSGT00940000157089.A ENSGT00940000159073 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT00940000162251 ENSGT00390000009535 ENSGT00940000166187.o ENSGT00530000063823.b.a ENSGT01100000263484.B.a ENSGT00730000111190 ENSGT00940000170707 ENSGT00500000044916 ENSGT00390000004877 NAME_6 ANCESTRAL SPECIES 29 ENSGT00390000006218 ENSGT00940000157398.i.b ENSGT00390000006548.a.b.b ENSGT00390000018319.a.a.a.b.c ENSGT00940000164795 ENSGT00950000182940.b.a.a.g.a ENSGT00940000154876.a.b.b ENSGT00940000154876.a.b.a ENSGT00390000004930 ENSGT00950000183093.B.a.a ENSGT00390000014757.z ENSGT00390000014757.y ENSGT00390000012935 ENSGT00940000157089.A ENSGT00940000159073 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT00940000162251 ENSGT00390000009535 ENSGT00940000166187.o ENSGT00530000063823.b.a ENSGT01100000263484.B.a ENSGT00940000168053 ENSGT00940000170707 ENSGT00500000044916 ENSGT00390000004877 Sailfin molly MODERN SPECIES 184 siah1 (ENSPLAG00000000588) #22 lonp2 (ENSPLAG00000014407) #23 il34 (ENSPLAG00000014364) sf3b3 (ENSPLAG00000014330) st3gal2 (ENSPLAG00000014247) aars1 (ENSPLAG00000014226) exosc6 (ENSPLAG00000014150) foxl1 (ENSPLAG00000014145) kiaa0513 (ENSPLAG00000014132) ENSPLAG00000014084 zfpm1 (ENSPLAG00000013968) Amazon molly MODERN SPECIES 459 commd9 (ENSPFOG00000013964) sh3gl3b (ENSPFOG00000013975) zgc:114188 (ENSPFOG00000014035) cart2 (ENSPFOG00000014040) ENSPFOG00000014042 ENSPFOG00000014055 ANPEP (ENSPFOG00000014266) anpepb.1 (ENSPFOG00000014311) dnaaf4 (ENSPFOG00000014680) DBX1 (ENSPFOG00000014727) ENSPFOG00000022200 ckap5 (ENSPFOG00000014769) cstpp1 (ENSPFOG00000015125) mapk8ip1a (ENSPFOG00000015129) cry2 (ENSPFOG00000015153) siah1 (ENSPFOG00000015278) #22 lonp2 (ENSPFOG00000015295) #23 il34 (ENSPFOG00000015458) sf3b3 (ENSPFOG00000015516) st3gal2 (ENSPFOG00000015679) aars1 (ENSPFOG00000015763) exosc6 (ENSPFOG00000015869) foxl1 (ENSPFOG00000023339) kiaa0513 (ENSPFOG00000015879) ENSPFOG00000015926 ENSPFOG00000023224 zfpm1 (ENSPFOG00000022969) zfpm1 (ENSPFOG00000016095) Guppy MODERN SPECIES 458 sycp3 (ENSPREG00000020246) commd9 (ENSPREG00000020230) sh3gl3b (ENSPREG00000020218) zgc:114188 (ENSPREG00000020192) cart2 (ENSPREG00000020180) ENSPREG00000020158 ENSPREG00000020142 ANPEP (ENSPREG00000020078) anpepb.1 (ENSPREG00000020040) dnaaf4 (ENSPREG00000019982) DBX1 (ENSPREG00000019962) ckap5 (ENSPREG00000019911) cstpp1 (ENSPREG00000019884) mapk8ip1a (ENSPREG00000019855) cry2 (ENSPREG00000019837) siah1 (ENSPREG00000019816) #22 lonp2 (ENSPREG00000019787) #23 il34 (ENSPREG00000019768) sf3b3 (ENSPREG00000019669) st3gal2 (ENSPREG00000019603) aars1 (ENSPREG00000019562) exosc6 (ENSPREG00000019548) foxl1 (ENSPREG00000019542) kiaa0513 (ENSPREG00000019529) ENSPREG00000019506 ENSPREG00000019492 zfpm1 (ENSPREG00000019479) trhr2 (ENSPREG00000019353) zc3h18 (ENSPREG00000019303) ENSPREG00000019288 psme3ip1 (ENSPREG00000019274) Platyfish MODERN SPECIES 11 commd9 (ENSXMAG00000006626) sh3gl3b (ENSXMAG00000006602) zgc:114188 (ENSXMAG00000006593) cart2 (ENSXMAG00000021655) ENSXMAG00000006586 ENSXMAG00000006549 ANPEP (ENSXMAG00000006541) anpepb.1 (ENSXMAG00000006489) dnaaf4 (ENSXMAG00000006476) DBX1 (ENSXMAG00000021940) ckap5 (ENSXMAG00000006428) cstpp1 (ENSXMAG00000006426) mapk8ip1a (ENSXMAG00000006418) cry2 (ENSXMAG00000006417) ENSXMAG00000026648 siah1 (ENSXMAG00000023362) #22 ENSXMAG00000023005 lonp2 (ENSXMAG00000006374) #23 il34 (ENSXMAG00000006373) sf3b3 (ENSXMAG00000006334) st3gal2 (ENSXMAG00000006324) aars1 (ENSXMAG00000006282) exosc6 (ENSXMAG00000006280) foxl1 (ENSXMAG00000024110) kiaa0513 (ENSXMAG00000006268) ces3 (ENSXMAG00000006261) zfpm1 (ENSXMAG00000009855) trhr2 (ENSXMAG00000006255) zc3h18 (ENSXMAG00000006239) ENSXMAG00000006238 psme3ip1 (ENSXMAG00000006232) NAME_4 ANCESTRAL SPECIES 30 ENSGT00390000006218 ENSGT00940000157398.i.b ENSGT00390000006548.a.b.b ENSGT00390000018319.a.a.a.b.c ENSGT00940000164795 ENSGT00950000182940.b.a.a.g.a ENSGT00940000154876.a.b.b ENSGT00940000154876.a.b.a ENSGT00390000004930 ENSGT00950000183093.B.a.a ENSGT00390000014757 ENSGT00390000012935 ENSGT00940000157089.A ENSGT00940000159073 ENSGT01050000245029 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT00940000162251 ENSGT00390000009535 ENSGT00940000166187 ENSGT00530000063823.b.a ENSGT01100000263484.B.a ENSGT00730000111190 ENSGT00940000170707 ENSGT00500000044916 ENSGT00390000004877 Mummichog MODERN SPECIES 2241 commd9 (ENSFHEG00000018398) sh3gl3b (ENSFHEG00000018367) zgc:114188 (ENSFHEG00000018360) cart2 (ENSFHEG00000000474) zgc:193812 (ENSFHEG00000000472) ENSFHEG00000018321 ANPEP (ENSFHEG00000018265) anpepb.1 (ENSFHEG00000018249) dnaaf4 (ENSFHEG00000018238) DBX1 (ENSFHEG00000018231) ckap5 (ENSFHEG00000018197) cstpp1 (ENSFHEG00000018079) mapk8ip1a (ENSFHEG00000018062) cry2 (ENSFHEG00000017988) ENSFHEG00000017932 siah1 (ENSFHEG00000017928) #22 lonp2 (ENSFHEG00000017910) #23 il34 (ENSFHEG00000017863) sf3b3 (ENSFHEG00000017824) st3gal2 (ENSFHEG00000017508) exosc6 (ENSFHEG00000017490) foxl1 (ENSFHEG00000017483) kiaa0513 (ENSFHEG00000000439) Sheepshead minnow MODERN SPECIES 406 sycp3 (ENSCVAG00000011505) commd9 (ENSCVAG00000011463) sh3gl3b (ENSCVAG00000011426) zgc:114188 (ENSCVAG00000011417) cart3 (ENSCVAG00000011397) zgc:193812 (ENSCVAG00000011388) ENSCVAG00000011382 ANPEP (ENSCVAG00000011336) anpepb.1 (ENSCVAG00000011320) dnaaf4 (ENSCVAG00000011205) DBX1 (ENSCVAG00000011052) ENSCVAG00000011041 ENSCVAG00000000298 cstpp1 (ENSCVAG00000000705) cry2 (ENSCVAG00000010968) siah1 (ENSCVAG00000010927) #22 lonp2 (ENSCVAG00000010911) #23 il34 (ENSCVAG00000010501) sf3b3 (ENSCVAG00000010459) st3gal2 (ENSCVAG00000010376) aars1 (ENSCVAG00000000882) Aplocheiloidei ANCESTRAL SPECIES 118 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT00500000044916 ENSGT00940000170707 ENSGT00730000111190 ENSGT01100000263484.B.a ENSGT00530000063823.b.a ENSGT00390000009535 ENSGT00940000162251 ENSGT00940000175365 ENSGT00940000155273 Turquoise killifish MODERN SPECIES 1622 actr6 (ENSNFUG00015022161) KIAA0101 (ENSNFUG00015022169) nedd1 (ENSNFUG00015022171) Nfu_g_1_008559 (ENSNFUG00015022172) RPS17 (ENSNFUG00015022174) SH3GL3B (ENSNFUG00015022177) commd9 (ENSNFUG00015022178) SYCP3 (ENSNFUG00015022180) OLA.7388 (ENSNFUG00015022186) MAPK8IP1 (ENSNFUG00015022188) si:ch211-212o1.2 (ENSNFUG00015022193) znf423 (ENSNFUG00015022199) #18 Nfu_g_1_008338 (ENSNFUG00015022244) CNOT1 (ENSNFUG00015022269) N4BP1 (ENSNFUG00015022326) #21 siah1 (ENSNFUG00015022333) #22 lonp2 (ENSNFUG00015022348) #23 il34 (ENSNFUG00015022360) SF3B3 (ENSNFUG00015022368) st3gal2 (ENSNFUG00015022391) AARS (ENSNFUG00015022393) EXOSC6 (ENSNFUG00015022404) psme3ip1 (ENSNFUG00015022405) ENSNFUG00015022406 zc3h18 (ENSNFUG00015022407) trhr2 (ENSNFUG00015022408) zfpm1 (ENSNFUG00015022409) SMAD3 (ENSNFUG00015022410) ENSNFUG00015022411 KIAA0513 (ENSNFUG00015022416) foxl1 (ENSNFUG00015022423) Mangrove rivulus MODERN SPECIES 788 n4bp1 (ENSKMAG00000019562) #21 siah1 (ENSKMAG00000019584) #22 lonp2 (ENSKMAG00000019600) #23 Ovalentaria_B ANCESTRAL SPECIES 3 ENSGT00940000163301.d.a.a ENSGT00940000163301.d.a.b ENSGT00940000158063 ENSGT00940000155883.a.a ENSGT00390000018132 ENSGT00940000153528.a.a ENSGT00940000162243 ENSGT00390000017113 ENSGT00940000153577.C ENSGT00390000014869 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT00500000044916 ENSGT00940000157653 ENSGT00940000160652 ENSGT01010000222686 ENSGT00940000163461.a.a.a.b.c.g ENSGT00940000166578 ENSGT00940000165046.b ENSGT00950000183108.b.a.a.i.b ENSGT00950000182991.A.a.c.b Pomacentridae ANCESTRAL SPECIES 1 ENSGT00940000163301.d.a.b ENSGT00940000158063 ENSGT00940000155883.a.a ENSGT00940000155883.a.b.a.a ENSGT00390000018132 ENSGT00940000153528.a.a ENSGT00940000162243 ENSGT00390000017113 ENSGT00940000153577.C ENSGT00390000014869 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT00500000044916 ENSGT00940000157653 ENSGT00940000160652 ENSGT00940000163461.a.a.a.b.c.f.b.a ENSGT01010000222686 ENSGT00940000163461.a.a.a.b.c.g ENSGT00940000166578 ENSGT00940000165046.b ENSGT00950000183108.b.a.a.i.b Pomacentridae_A ANCESTRAL SPECIES 68 ENSGT00940000163301.d.a.a.e.b.a.a.a.a.a.b ENSGT00940000163301.d.a.b ENSGT00940000158063 ENSGT00940000155883.a.b.a.a ENSGT00390000018132 ENSGT00940000153528.a.a ENSGT00940000162243 ENSGT00390000017113 ENSGT00940000153577.C ENSGT00390000014869 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT00500000044916 ENSGT00940000157653 ENSGT00940000160652 ENSGT00940000163461.a.a.a.b.c.f.b.a ENSGT01010000222686 ENSGT00940000163461.a.a.a.b.c.g ENSGT00940000166578 ENSGT00940000165046.b ENSGT00950000183108.b.a.a.i.b Amphiprion ANCESTRAL SPECIES 64 ENSGT00940000158063 ENSGT00940000155883.a.a ENSGT00940000155883.a.b.a.a ENSGT00390000018132 ENSGT00940000153528.a.a ENSGT00940000162243 ENSGT00390000017113 ENSGT00940000168006.f ENSGT00940000153577.C ENSGT00390000014869 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000174775 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT00500000044916 ENSGT00940000157653 ENSGT00940000160652 ENSGT00940000163461.a.a.a.b.c.g.db.b ENSGT01010000222686 ENSGT00940000163461.a.a.a.b.c.g.db.a ENSGT00940000163461.a.a.a.b.c.g.eb ENSGT00940000166578 Clown anemonefish MODERN SPECIES 881 n4bp1 (ENSAOCG00000016073) #21 siah1 (ENSAOCG00000016101) #22 ENSAOCG00000016114 ubl3b (ENSAOCG00000016136) FOXO4 (ENSAOCG00000016150) ENSAOCG00000016186 zgc:92907 (ENSAOCG00000016198) Orange clownfish MODERN SPECIES 18 hsf4 (ENSAPEG00000022093) ENSAPEG00000022144 ENSAPEG00000022166 cbfb (ENSAPEG00000022174) phaf1 (ENSAPEG00000022235) B3GNT9 (ENSAPEG00000022288) bbs2 (ENSAPEG00000022300) ENSAPEG00000022325 setd6 (ENSAPEG00000022329) cnot1 (ENSAPEG00000022342) si:ch211-216l23.2 (ENSAPEG00000022439) znf423 (ENSAPEG00000022511) #18 si:ch211-212o1.2 (ENSAPEG00000022592) cbln1 (ENSAPEG00000022622) #20 n4bp1 (ENSAPEG00000022641) #21 siah1 (ENSAPEG00000022716) #22 lonp2 (ENSAPEG00000022731) #23 ENSAPEG00000022766 il34 (ENSAPEG00000022777) sf3b3 (ENSAPEG00000022786) st3gal2 (ENSAPEG00000022858) aars1 (ENSAPEG00000022892) exosc6 (ENSAPEG00000022951) psme3ip1 (ENSAPEG00000022959) cpne2 (ENSAPEG00000022981) ENSAPEG00000023021 ENSAPEG00000023065 ENSAPEG00000023118 ENSAPEG00000023130 ENSAPEG00000023196 ENSAPEG00000023269 Spiny chromis MODERN SPECIES 654 cbln1 (ENSAPOG00000019443) #20 n4bp1 (ENSAPOG00000019418) #21 siah1 (ENSAPOG00000019314) #22 ENSAPOG00000019284 #23 Bicolor damselfish MODERN SPECIES 545 ENSSPAG00000009322 ENSSPAG00000009308 #18 si:ch211-212o1.2 (ENSSPAG00000009287) cbln1 (ENSSPAG00000009280) #20 n4bp1 (ENSSPAG00000009205) #21 siah1 (ENSSPAG00000009177) #22 Cichlidae ANCESTRAL SPECIES 5 ENSGT01050000244866.C ENSGT00940000163301.d.a.a.g.a.b ENSGT00940000158063 ENSGT00940000155883.a.a ENSGT00390000018132 ENSGT00940000153528.a.a ENSGT00940000162243 ENSGT00390000017113 ENSGT00940000153577.C ENSGT00390000014869 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT00500000044916 ENSGT00940000157653 ENSGT00940000160652 ENSGT00940000163461.a.a.a.b.c.g ENSGT01010000222686 ENSGT00940000166578 ENSGT00940000165046.b ENSGT00950000183108.b.a.a.i.b ENSGT00950000182991.A.a.c.b Midas cichlid MODERN SPECIES 1255 ENSACIG00000015787 ENSACIG00000015793 ENSACIG00000015807 cbfb (ENSACIG00000015821) phaf1 (ENSACIG00000015839) B3GNT9 (ENSACIG00000015868) bbs2 (ENSACIG00000015892) setd6 (ENSACIG00000015929) cnot1 (ENSACIG00000016003) ENSACIG00000016103 si:ch211-216l23.2 (ENSACIG00000016111) znf423 (ENSACIG00000016128) #18 si:ch211-212o1.2 (ENSACIG00000016174) cbln1 (ENSACIG00000016213) #20 n4bp1 (ENSACIG00000016386) #21 siah1 (ENSACIG00000016422) #22 lonp2 (ENSACIG00000016434) #23 il34 (ENSACIG00000016469) sf3b3 (ENSACIG00000016487) st3gal2 (ENSACIG00000016564) aars1 (ENSACIG00000016586) exosc6 (ENSACIG00000016636) psme3ip1 (ENSACIG00000016647) cpne2 (ENSACIG00000016664) ENSACIG00000016709 ENSACIG00000016871 ENSACIG00000016955 si:dkey-12e7.4 (ENSACIG00000016970) calb2a (ENSACIG00000016986) pnp6 (ENSACIG00000017001) Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00940000154837 #22 ENSGT00940000158682 #21 ENSGT00940000159811 #20 ENSGT00940000163703.b ENSGT00940000158492 #18 ENSGT00530000064134.a.a ENSGT00390000014869 ENSGT00940000153577.C ENSGT00390000017113 ENSGT00940000162243 ENSGT00940000153528.a.a ENSGT00390000018132 ENSGT00940000155883.a.a ENSGT00940000158063 ENSGT00940000163301.d.a.a.h ENSGT00940000163301.d.a.a.g.b.a Nile tilapia DUPLICATION Nile tilapia MODERN SPECIES 19 ENSONIG00000040531 ENSONIG00000010649 ENSONIG00000038407 ENSONIG00000030463 lamb1a (ENSONIG00000017383) ENSONIG00000017391 IRX5 (ENSONIG00000018236) RBL2 (ENSONIG00000018239) KCTD15 (ENSONIG00000018241) CHST8 (ENSONIG00000027541) ENSONIG00000035628 ENSONIG00000027880 ENSONIG00000029449 gpia (ENSONIG00000018246) mphosph6 (ENSONIG00000039940) ENSONIG00000038862 #22 SNX20 (ENSONIG00000036517) #10 tph2 (ENSONIG00000018258) ENSONIG00000042294 ENSONIG00000037639 tbc1d15 (ENSONIG00000018266) ZFC3H1 (ENSONIG00000018271) PTPRB (ENSONIG00000018272) frs2b (ENSONIG00000018278) nup160 (ENSONIG00000018279) ENSONIG00000031707 TMED6 (ENSONIG00000010650) ENSONIG00000041776 chka (ENSONIG00000010654) ENSONIG00000038636 ENSONIG00000041959 Nile tilapia MODERN SPECIES 19 ENSONIG00000032947 ccnd2a (ENSONIG00000032436) tigara (ENSONIG00000042173) ENSONIG00000039946 FGF6 (ENSONIG00000041125) slc45a3 (ENSONIG00000010277) ENSONIG00000028180 zgc:154077 (ENSONIG00000010272) e2f4 (ENSONIG00000010271) ELMO3 (ENSONIG00000010266) ENSONIG00000010264 ENSONIG00000033564 MMP15 (ENSONIG00000010259) zpd (ENSONIG00000010255) nup93 (ENSONIG00000010250) siah1 (ENSONIG00000035905) #22 n4bp1 (ENSONIG00000007367) #21 ENSONIG00000028086 ENSONIG00000038902 ENSONIG00000029901 cbln1 (ENSONIG00000040280) #20 si:ch211-212o1.2 (ENSONIG00000007362) znf423 (ENSONIG00000007360) #18 si:ch211-216l23.2 (ENSONIG00000007359) cnot1 (ENSONIG00000007358) steep1 (ENSONIG00000021285) sc5d (ENSONIG00000009503) anapc13 (ENSONIG00000032477) rspry1 (ENSONIG00000010243) arl2bp (ENSONIG00000010240) pllp (ENSONIG00000010238) Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00940000154837 #22 ENSGT00940000158682 #21 ENSGT00940000159811 #20 ENSGT00940000163703.b ENSGT00940000158492 #18 ENSGT00530000064134.a.a ENSGT00390000014869 ENSGT00940000153577.C ENSGT00390000017113 ENSGT00940000162243 ENSGT00940000153528.a.a ENSGT00390000018132 ENSGT00940000155883.a.a ENSGT00940000158063 ENSGT00940000163301.d.a.a.h ENSGT00940000163301.d.a.a.g.b.a.a Lyretail cichlid MODERN SPECIES 330 siah1 (ENSNBRG00000019604) #22 n4bp1 (ENSNBRG00000019593) #21 cbln1 (ENSNBRG00000019574) #20 si:ch211-212o1.2 (ENSNBRG00000019553) znf423 (ENSNBRG00000019486) #18 si:ch211-216l23.2 (ENSNBRG00000019457) cnot1 (ENSNBRG00000019358) setd6 (ENSNBRG00000019302) bbs2 (ENSNBRG00000019254) B3GNT9 (ENSNBRG00000019234) phaf1 (ENSNBRG00000019201) cbfb (ENSNBRG00000019154) ENSNBRG00000019120 hsf4 (ENSNBRG00000019082) ENSNBRG00000019039 ENSNBRG00000018999 Haplochromini ANCESTRAL SPECIES ENSGT00940000154837 #22 ENSGT00940000158682 #21 ENSGT00940000159811 #20 ENSGT00940000163703.b ENSGT00940000158492 #18 ENSGT00530000064134.a.a ENSGT00390000014869 ENSGT00940000153577.C ENSGT00390000017113 ENSGT00940000162243 ENSGT00940000153528.a.a ENSGT00390000018132 ENSGT00940000155883.a.a ENSGT00940000158063 ENSGT00940000163301.d.a.a.h ENSGT00940000163301.d.a.a.g.b.a.b Burton s mouthbrooder MODERN SPECIES 1280 siah1 (ENSHBUG00000004751) #22 n4bp1 (ENSHBUG00000004798) #21 Haplochromini_A ANCESTRAL SPECIES 1 ENSGT00940000154837 #22 ENSGT00940000158682 #21 ENSGT00940000159811 #20 ENSGT00940000163703.b ENSGT00940000158492 #18 ENSGT00530000064134.a.a ENSGT00390000014869 ENSGT00940000153577.C ENSGT00390000017113 ENSGT00940000162243 ENSGT00940000153528.a.a ENSGT00390000018132 ENSGT00940000155883.a.b.b ENSGT00940000155883.a.a ENSGT00940000158063 ENSGT00940000163301.d.a.a.h.a P. nyererei MODERN SPECIES 614 siah1 (ENSPNYG00000023294) #22 n4bp1 (ENSPNYG00000023298) #21 cbln1 (ENSPNYG00000023301) #20 Haplochromini_B ANCESTRAL SPECIES 40 ENSGT00940000154837 #22 ENSGT00940000158682 #21 ENSGT00940000159811 #20 ENSGT00940000163703.b ENSGT00940000158492 #18 ENSGT00530000064134.a.a ENSGT00390000014869 ENSGT00940000153577.C ENSGT00390000017113 ENSGT00940000162243 ENSGT00940000153528.a.a ENSGT00390000018132 ENSGT00940000155883.a.a ENSGT00940000158063 ENSGT00940000163301.d.a.a.h.a ENSGT00940000163301.d.a.a.g.b.a.a Zebra mbuna MODERN SPECIES 1110 sc5d (ENSMZEG00005015902) anapc13 (ENSMZEG00005015913) ENSMZEG00005015919 rspry1 (ENSMZEG00005015927) arl2bp (ENSMZEG00005015941) pllp (ENSMZEG00005015946) ENSMZEG00005015955 ENSMZEG00005015972 ENSMZEG00005015975 ENSMZEG00005015986 ENSMZEG00005016002 ENSMZEG00005016008 ENSMZEG00005016016 hsf4 (ENSMZEG00005016023) ENSMZEG00005016029 siah1 (ENSMZEG00005016100) #22 n4bp1 (ENSMZEG00005016117) #21 cbln1 (ENSMZEG00005016145) #20 si:ch211-212o1.2 (ENSMZEG00005016154) znf423 (ENSMZEG00005016171) #18 si:ch211-216l23.2 (ENSMZEG00005016197) cnot1 (ENSMZEG00005016210) setd6 (ENSMZEG00005016231) bbs2 (ENSMZEG00005016240) B3GNT9 (ENSMZEG00005016259) ENSMZEG00005016263 phaf1 (ENSMZEG00005016267) cbfb (ENSMZEG00005016281) ELMO3 (ENSMZEG00005016325) ENSMZEG00005016351 e2f4 (ENSMZEG00005016357) Eastern happy DUPLICATION Eastern happy MODERN SPECIES 19 lyrm5b (ENSACLG00000022704) ENSACLG00000022707 ENSACLG00000022721 sycp3 (ENSACLG00000022736) ENSACLG00000022744 ENSACLG00000022808 ENSACLG00000022820 ENSACLG00000022826 ITGA11 (ENSACLG00000022852) ENSACLG00000022942 CLN6 (ENSACLG00000022955) CALML4 (ENSACLG00000023107) ENSACLG00000023113 ENSACLG00000023234 ENSACLG00000023243 siah1 (ENSACLG00000023251) #22 CIAO2A (ENSACLG00000023268) spg11 (ENSACLG00000023303) ENSACLG00000023531 ENSACLG00000023546 znf277 (ENSACLG00000023549) immp2l (ENSACLG00000023676) ENSACLG00000023686 LRRN3 (ENSACLG00000023690) ENSACLG00000023729 ENSACLG00000023698 DUS2 (ENSACLG00000023737) SLC7A10 (ENSACLG00000023774) faap24 (ENSACLG00000023802) ANKRD27 (ENSACLG00000023816) ENSACLG00000023848 Eastern happy MODERN SPECIES 19 siah1 (ENSACLG00000014923) #22 n4bp1 (ENSACLG00000014886) #21 ENSACLG00000014870 cbln1 (ENSACLG00000014806) #20 si:ch211-212o1.2 (ENSACLG00000014781) znf423 (ENSACLG00000014606) #18 si:ch211-216l23.2 (ENSACLG00000014470) cnot1 (ENSACLG00000014234) setd6 (ENSACLG00000014124) bbs2 (ENSACLG00000014001) ENSACLG00000013994 ENSACLG00000013988 B3GNT9 (ENSACLG00000013959) ENSACLG00000013944 phaf1 (ENSACLG00000013835) cbfb (ENSACLG00000013797) Percomorphaceae_C ANCESTRAL SPECIES 5 ENSGT00940000155883.a.b.b ENSGT00940000155883.a.b.a.a ENSGT00390000018132 ENSGT00940000153528.a.a ENSGT00940000162243 ENSGT00390000017113 ENSGT00940000153577.C ENSGT00390000014869 ENSGT00940000179157 ENSGT00530000064134.a.a ENSGT00960000187150 ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT01050000244866.C ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000157894 ENSGT00940000168208 ENSGT00390000008673 ENSGT00550000075101.r ENSGT00950000182967 ENSGT00390000002197 Percomorphaceae_D ANCESTRAL SPECIES 5 ENSGT00940000155883.a.b.b ENSGT00940000155883.a.b.a.a ENSGT00390000018132 ENSGT00940000153528.a.a ENSGT00940000162243 ENSGT00390000017113 ENSGT00940000153577.C ENSGT00390000014869 ENSGT00940000179157 ENSGT00530000064134.a.a ENSGT00960000187150 ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT01050000244866.C ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000157894 ENSGT00940000168208 ENSGT00390000008673 ENSGT00550000075101.r ENSGT00950000182967 ENSGT00390000002197 Anabantaria ANCESTRAL SPECIES 5 ENSGT00940000163301.d.a.a.i.b ENSGT00940000163301.d.a.b ENSGT00940000158063 ENSGT00940000155883.a.a ENSGT00390000018132 ENSGT00940000153528.a.a ENSGT00940000162243 ENSGT00390000017113 ENSGT00940000153577.C ENSGT00390000014869 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT01050000244866.C ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000157894 ENSGT00940000168208 ENSGT00390000008673 ENSGT00550000075101.r ENSGT00950000182967 ENSGT00390000002197 Anabantoidei ANCESTRAL SPECIES 5 ENSGT00940000163301.d.a.a.i.b ENSGT00940000163301.d.a.b ENSGT00940000158063 ENSGT00940000155883.a.a ENSGT00390000018132 ENSGT00940000153528.a.a ENSGT00940000162243 ENSGT00390000017113 ENSGT00940000153577.C ENSGT00390000014869 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT00940000155356.d.b.b.a ENSGT01050000244866.C ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000157894 ENSGT00940000168208 ENSGT00390000008673 ENSGT00550000075101.r ENSGT00950000182967 Climbing perch MODERN SPECIES 19 ENSATEG00000011263 ENSATEG00000011283 ENSATEG00000012545 ENSATEG00000012600 ENSATEG00000028466 phaf1 (ENSATEG00000012680) ENSATEG00000012754 bbs2 (ENSATEG00000012766) ENSATEG00000012847 ENSATEG00000012892 si:ch211-216l23.2 (ENSATEG00000013056) znf423 (ENSATEG00000013103) #18 si:ch211-212o1.2 (ENSATEG00000028268) cbln1 (ENSATEG00000025678) #20 n4bp1 (ENSATEG00000013553) #21 siah1 (ENSATEG00000013586) #22 lonp2 (ENSATEG00000013617) #23 il34 (ENSATEG00000013660) sf3b3 (ENSATEG00000013708) st3gal2 (ENSATEG00000013795) aars1 (ENSATEG00000013826) ENSATEG00000014148 ENSATEG00000013918 ENSATEG00000014166 PLLP (ENSATEG00000028516) ENSATEG00000027222 RSPRY1 (ENSATEG00000014238) ENSATEG00000014269 ENSATEG00000014285 ENSATEG00000014289 ENSATEG00000029750 Siamese fighting fish MODERN SPECIES 17 pard6a (ENSBSLG00000000593) NTRK3 (ENSBSLG00000000671) ENSBSLG00000000758 ENSBSLG00000000761 ENSBSLG00000000776 setd6 (ENSBSLG00000000802) cnot1 (ENSBSLG00000000845) si:ch211-216l23.2 (ENSBSLG00000000885) znf423 (ENSBSLG00000000898) #18 ENSBSLG00000000943 si:ch211-212o1.2 (ENSBSLG00000000946) ENSBSLG00000000949 cbln1 (ENSBSLG00000001235) #20 ENSBSLG00000001266 n4bp1 (ENSBSLG00000001280) #21 siah1 (ENSBSLG00000001296) #22 lonp2 (ENSBSLG00000001333) #23 il34 (ENSBSLG00000001448) sf3b3 (ENSBSLG00000001464) st3gal2 (ENSBSLG00000001489) aars1 (ENSBSLG00000001503) exosc6 (ENSBSLG00000001640) pth1a (ENSBSLG00000001655) btbd10a (ENSBSLG00000001660) bmal1a (ENSBSLG00000001780) PPFIBP2 (ENSBSLG00000002468) sb:cb470 (ENSBSLG00000002988) poglut3 (ENSBSLG00000002991) ENSBSLG00000003566 cyb5r2 (ENSBSLG00000003644) far1 (ENSBSLG00000003698) Zig-zag eel MODERN SPECIES 20 ENSMAMG00000016165 ENSMAMG00000016194 HSF4 (ENSMAMG00000016233) ENSMAMG00000016286 ENSMAMG00000024985 C16orf70 (ENSMAMG00000016379) ENSMAMG00000016439 bbs2 (ENSMAMG00000016450) ENSMAMG00000016475 ENSMAMG00000016524 si:ch211-216l23.2 (ENSMAMG00000016619) znf423 (ENSMAMG00000016634) #18 si:ch211-212o1.2 (ENSMAMG00000016716) cbln1 (ENSMAMG00000016734) #20 n4bp1 (ENSMAMG00000016743) #21 siah1 (ENSMAMG00000016758) #22 lonp2 (ENSMAMG00000016780) #23 il34 (ENSMAMG00000016825) sf3b3 (ENSMAMG00000016837) st3gal2 (ENSMAMG00000016924) aars1 (ENSMAMG00000016945) ENSMAMG00000016983 ENSMAMG00000016997 pllp (ENSMAMG00000017040) ENSMAMG00000017050 RSPRY1 (ENSMAMG00000017061) ENSMAMG00000017111 ENSMAMG00000028149 ENSMAMG00000027790 ENSMAMG00000017143 ENSMAMG00000017155 Carangaria ANCESTRAL SPECIES 6 ENSGT00940000155883.a.b.b ENSGT00940000155883.a.b.a.a ENSGT00390000018132 ENSGT00940000153528.a.a ENSGT00940000162243 ENSGT00390000017113 ENSGT00940000153577.C ENSGT00390000014869 ENSGT00940000179157 ENSGT00530000064134.a.a ENSGT00960000187150 ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT00500000044916 ENSGT00940000157653 ENSGT00940000160652 ENSGT00940000163461.a.a.a.b.c.g ENSGT01010000222686 ENSGT00940000166578 ENSGT00940000165046.b ENSGT00950000183108.b.a.a.i.b ENSGT00950000182991.A.a.c.b Carangaria_A ANCESTRAL SPECIES ENSGT00940000158063 ENSGT00940000155883.a.a ENSGT00940000155883.a.b.b ENSGT00940000155883.a.b.a.a ENSGT00390000018132 ENSGT00940000153528.a.a ENSGT00940000162243 ENSGT00390000017113 ENSGT00940000153577.C ENSGT00390000014869 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT00500000044916 ENSGT00940000157653 ENSGT00940000160652 ENSGT00940000163461.a.a.a.b.c.g ENSGT01010000222686 ENSGT00940000166578 ENSGT00940000165046.b ENSGT00950000183108.b.a.a.i.b ENSGT00950000182991.A.a.c.b Seriola ANCESTRAL SPECIES 54 ENSGT00940000158063 ENSGT00940000155883.a.a ENSGT00940000155883.a.b.b ENSGT00940000155883.a.b.a.a ENSGT00390000018132 ENSGT00940000153528.a.a ENSGT00940000162243 ENSGT00390000017113 ENSGT00940000153577.C ENSGT00390000014869 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT00500000044916 ENSGT00940000157653 ENSGT00940000160652 ENSGT00940000163461.a.a.a.b.c.g ENSGT01010000222686 ENSGT00940000166578 ENSGT00940000165046.b ENSGT00950000183108.b.a.a.i.b ENSGT00950000182991.A.a.c.b Greater amberjack MODERN SPECIES 61 ENSSDUG00000021642 hsf4 (ENSSDUG00000021623) ENSSDUG00000021609 GNAO1 (ENSSDUG00000021606) cbfb (ENSSDUG00000021590) phaf1 (ENSSDUG00000021578) B3GNT9 (ENSSDUG00000021564) bbs2 (ENSSDUG00000021555) setd6 (ENSSDUG00000021547) cnot1 (ENSSDUG00000021491) si:ch211-216l23.2 (ENSSDUG00000021463) znf423 (ENSSDUG00000021415) #18 si:ch211-212o1.2 (ENSSDUG00000021402) cbln1 (ENSSDUG00000021395) #20 n4bp1 (ENSSDUG00000021382) #21 siah1 (ENSSDUG00000021372) #22 lonp2 (ENSSDUG00000021340) #23 il34 (ENSSDUG00000021317) sf3b3 (ENSSDUG00000021201) st3gal2 (ENSSDUG00000021172) aars1 (ENSSDUG00000021127) exosc6 (ENSSDUG00000021109) psme3ip1 (ENSSDUG00000021094) cpne2 (ENSSDUG00000021065) NLRC5 (ENSSDUG00000021003) ENSSDUG00000020957 ENSSDUG00000020944 ENSSDUG00000020765 ENSSDUG00000020728 si:dkey-12e7.4 (ENSSDUG00000020721) calb2a (ENSSDUG00000020695) Yellowtail amberjack MODERN SPECIES 2723 znf423 (ENSSLDG00000005127) #18 si:ch211-212o1.2 (ENSSLDG00000005066) cbln1 (ENSSLDG00000005051) #20 n4bp1 (ENSSLDG00000004993) #21 siah1 (ENSSLDG00000004967) #22 Barramundi perch MODERN SPECIES 112 ENSLCAG00010010819 hsf4 (ENSLCAG00010010825) ENSLCAG00010010845 cbfb (ENSLCAG00010010883) phaf1 (ENSLCAG00010010912) B3GNT9 (ENSLCAG00010010978) bbs2 (ENSLCAG00010010991) setd6 (ENSLCAG00010011033) cnot1 (ENSLCAG00010011068) si:ch211-216l23.2 (ENSLCAG00010011104) znf423 (ENSLCAG00010011126) #18 si:ch211-212o1.2 (ENSLCAG00010011196) cbln1 (ENSLCAG00010011200) #20 ENSLCAG00010011207 n4bp1 (ENSLCAG00010011211) #21 siah1 (ENSLCAG00010011216) #22 lonp2 (ENSLCAG00010011219) #23 il34 (ENSLCAG00010011226) ENSLCAG00010011231 sf3b3 (ENSLCAG00010011252) st3gal2 (ENSLCAG00010011314) aars1 (ENSLCAG00010011424) exosc6 (ENSLCAG00010012025) psme3ip1 (ENSLCAG00010012037) cpne2 (ENSLCAG00010012149) ENSLCAG00010012598 ENSLCAG00010012728 ENSLCAG00010013084 ENSLCAG00010013091 ENSLCAG00010013187 ENSLCAG00010013612 Pleuronectoidei ANCESTRAL SPECIES ENSGT00940000158063 ENSGT00940000155883.a.a ENSGT00390000018132 ENSGT00940000153528.a.a ENSGT00940000162243 ENSGT00390000017113 ENSGT00940000153577.C ENSGT00390000014869 ENSGT00940000179157 ENSGT00530000064134.a.a ENSGT00960000187150 ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT00500000044916 ENSGT00940000157653 ENSGT00940000160652 ENSGT01010000222686 ENSGT00940000164626.b.b.d ENSGT00940000163461.a.a.a.b.c.g ENSGT00940000166578 ENSGT00940000165046.b ENSGT00950000183108.b.a.a.i.b Turbot MODERN SPECIES 1 ENSSMAG00000013602 ENSSMAG00000028181 phaf1 (ENSSMAG00000013689) ENSSMAG00000013714 bbs2 (ENSSMAG00000013760) ENSSMAG00000013819 ENSSMAG00000013844 ENSSMAG00000025397 si:ch211-216l23.2 (ENSSMAG00000014094) znf423 (ENSSMAG00000014126) #18 ENSSMAG00000014194 si:ch211-212o1.2 (ENSSMAG00000014206) cbln1 (ENSSMAG00000022911) #20 ENSSMAG00000026131 n4bp1 (ENSSMAG00000014235) #21 siah1 (ENSSMAG00000014264) #22 lonp2 (ENSSMAG00000014295) #23 il34 (ENSSMAG00000034409) sf3b3 (ENSSMAG00000014386) st3gal2 (ENSSMAG00000014462) AARS (ENSSMAG00000014488) ENSSMAG00000014550 PSME3IP1 (ENSSMAG00000014561) ENSSMAG00000014579 ENSSMAG00000014651 ENSSMAG00000027081 ENSSMAG00000015016 ENSSMAG00000013570 ENSSMAG00000022963 ENSSMAG00000002786 ENSSMAG00000027915 Tongue sole MODERN SPECIES 16 ENSCSEG00000021473 nup160 (ENSCSEG00000021474) frs2b (ENSCSEG00000021475) PTPRB (ENSCSEG00000021477) syt9b (ENSCSEG00000021485) ENSCSEG00000021488 ENSCSEG00000021491 cnot1 (ENSCSEG00000021493) cnot1 (ENSCSEG00000021495) si:ch211-216l23.2 (ENSCSEG00000021500) znf423 (ENSCSEG00000021534) #18 ENSCSEG00000021535 si:ch211-212o1.2 (ENSCSEG00000021537) cbln1 (ENSCSEG00000021543) #20 n4bp1 (ENSCSEG00000021560) #21 siah1 (ENSCSEG00000021565) #22 ENSCSEG00000021571 wfdc1 (ENSCSEG00000021573) ENSCSEG00000021575 kcng4a (ENSCSEG00000021577) ENSCSEG00000021578 hsbp1a (ENSCSEG00000021579) ENSCSEG00000021580 mlycd (ENSCSEG00000021595) CDH13 (ENSCSEG00000021596) ccnd2a (ENSCSEG00000021626) tigara (ENSCSEG00000021630) ENSCSEG00000021631 ENSCSEG00000021634 ENSCSEG00000021637 slc2a13b (ENSCSEG00000021640) Eupercaria ANCESTRAL SPECIES 6 ENSGT00940000163301.d.a.a.i.b ENSGT00940000163301.d.a.b ENSGT00940000158063 ENSGT00940000155883.a.b.a.a ENSGT00390000018132 ENSGT00940000153528.a.a ENSGT00940000162243 ENSGT00390000017113 ENSGT00940000153577.C ENSGT00390000014869 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT01050000244866.C ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000157894 ENSGT00940000168208 ENSGT00390000008673 ENSGT00550000075101.r ENSGT00950000182967 ENSGT00390000002197 Tetraodontidae ANCESTRAL SPECIES 247 ENSGT00940000159811 #20 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 Tetraodon DUPLICATION Tetraodon MODERN SPECIES 26 ldb1a (ENSTNIG00000003998) ENSTNIG00000003997 tfap2d (ENSTNIG00000003995) MAST2 (ENSTNIG00000003994) ENSTNIG00000003993 mmd2a (ENSTNIG00000003992) ap5z1 (ENSTNIG00000003991) ENSTNIG00000003990 SDS (ENSTNIG00000003987) ENSTNIG00000003980 ENSTNIG00000003979 YTHDF1 (ENSTNIG00000003975) birc7 (ENSTNIG00000003974) ENSTNIG00000003968 ENSTNIG00000003967 siah1 (ENSTNIG00000003964) #22 lonp2 (ENSTNIG00000003963) #23 ENSTNIG00000003961 ENSTNIG00000000906 ENSTNIG00000003954 PLPPR1 (ENSTNIG00000003943) pus1 (ENSTNIG00000003942) ENSTNIG00000001866 noc4l (ENSTNIG00000003941) nek7 (ENSTNIG00000003934) ENSTNIG00000003929 ENSTNIG00000003928 ENSTNIG00000003927 ENSTNIG00000003920 gss (ENSTNIG00000003919) ENSTNIG00000001636 Tetraodon MODERN SPECIES 26 ENSTNIG00000002349 pthlha (ENSTNIG00000000580) ENSTNIG00000002440 ENSTNIG00000002352 tspan13a (ENSTNIG00000002353) ENSTNIG00000002354 ENSTNIG00000002356 ENSTNIG00000002357 ENSTNIG00000002359 ENSTNIG00000002360 ENSTNIG00000002362 ENSTNIG00000002363 rgma (ENSTNIG00000001545) ENSTNIG00000002365 n4bp1 (ENSTNIG00000002366) #21 siah1 (ENSTNIG00000002367) #22 ENSTNIG00000002368 ENSTNIG00000002374 ENSTNIG00000002375 ENSTNIG00000002376 ENSTNIG00000002377 ENSTNIG00000002378 ENSTNIG00000002379 ENSTNIG00000002380 glt8d2 (ENSTNIG00000003326) ENSTNIG00000002382 ENSTNIG00000000133 sars1 (ENSTNIG00000002383) ENSTNIG00000002384 KCNJ15 (ENSTNIG00000002385) ENSTNIG00000002386 Fugu MODERN SPECIES 72 ENSTRUG00000032193 ENSTRUG00000031939 ckap5 (ENSTRUG00000015453) cstpp1 (ENSTRUG00000032210) mapk8ip1a (ENSTRUG00000033130) cry2 (ENSTRUG00000015322) trhr2 (ENSTRUG00000032145) ENSTRUG00000015318 cry2 (ENSTRUG00000027831) ENSTRUG00000026659 cstpp1 (ENSTRUG00000015425) DBX1 (ENSTRUG00000032605) ENSTRUG00000026032 cbln1 (ENSTRUG00000029533) #20 ENSTRUG00000026063 siah1 (ENSTRUG00000003707) #22 lonp2 (ENSTRUG00000003832) #23 il34 (ENSTRUG00000022582) Eupecaria_A ANCESTRAL SPECIES 7 ENSGT00940000163301.d.a.a.i.b ENSGT00940000163301.d.a.b ENSGT00940000158063 ENSGT00940000155883.a.b.a.a ENSGT00390000018132 ENSGT00940000153528.a.a ENSGT00940000162243 ENSGT00390000017113 ENSGT00940000153577.C ENSGT00390000014869 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT01050000244866.C ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000157894 ENSGT00940000168208 ENSGT00390000008673 ENSGT00550000075101.r ENSGT00390000002197 ENSGT00950000182967 Ballan wrasse MODERN SPECIES 472 n4bp1 (ENSLBEG00000018074) #21 siah1 (ENSLBEG00000018136) #22 lonp2 (ENSLBEG00000018196) #23 il34 (ENSLBEG00000018250) sf3b3 (ENSLBEG00000018302) st3gal2 (ENSLBEG00000018471) aars1 (ENSLBEG00000018551) exosc6 (ENSLBEG00000018680) ENSLBEG00000018693 Eupecaria_B ANCESTRAL SPECIES 7 ENSGT00940000163301.d.a.a.i.b ENSGT00940000163301.d.a.b ENSGT00940000158063 ENSGT00940000155883.a.b.a.a ENSGT00390000018132 ENSGT00940000153528.a.a ENSGT00940000162243 ENSGT00390000017113 ENSGT00940000153577.C ENSGT00390000014869 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT01050000244866.C ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000157894 ENSGT00940000168208 ENSGT00390000008673 ENSGT00550000075101.r ENSGT00390000002197 ENSGT00950000182967 Eupecaria_C ANCESTRAL SPECIES 6 ENSGT00940000163301.d.a.a.i.b ENSGT00940000163301.d.a.b ENSGT00940000158063 ENSGT00940000155883.a.b.a.a ENSGT00390000018132 ENSGT00940000153528.a.a ENSGT00940000162243 ENSGT00390000017113 ENSGT00940000153577.C ENSGT00390000014869 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT01050000244866.C ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000157894 ENSGT00940000168208 ENSGT00390000008673 ENSGT00550000075101.r ENSGT00950000182967 ENSGT00390000002197 Eupercaria_incertae_sedis ANCESTRAL SPECIES 4 ENSGT00940000163301.d.a.a.i.b ENSGT00940000158063 ENSGT00940000155883.a.a ENSGT00940000155883.a.b.a.a ENSGT00390000018132 ENSGT00940000153528.a.a ENSGT00940000162243 ENSGT00390000017113 ENSGT00940000153577.C ENSGT00390000014869 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT01050000244866.C ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000157894 ENSGT00940000154745.b ENSGT00390000008673 ENSGT00550000075101.r ENSGT00950000182967 ENSGT00390000002197 Large yellow croaker MODERN SPECIES 492 FANCA (ENSLCRG00005022765) znf276 (ENSLCRG00005022772) vps9d1 (ENSLCRG00005022781) ENSLCRG00005022787 ENSLCRG00005022790 pdf (ENSLCRG00005022791) tat (ENSLCRG00005022802) ENSLCRG00005022878 setd6 (ENSLCRG00005022879) cnot1 (ENSLCRG00005022888) si:ch211-216l23.2 (ENSLCRG00005022916) znf423 (ENSLCRG00005022926) #18 si:ch211-212o1.2 (ENSLCRG00005022935) cbln1 (ENSLCRG00005022936) #20 n4bp1 (ENSLCRG00005022937) #21 siah1 (ENSLCRG00005022940) #22 lonp2 (ENSLCRG00005022952) #23 il34 (ENSLCRG00005023072) sf3b3 (ENSLCRG00005023078) ENSLCRG00005023087 pnp6 (ENSLCRG00005023091) calb2a (ENSLCRG00005023096) si:dkey-12e7.4 (ENSLCRG00005023106) ENSLCRG00005023109 ENSLCRG00005023113 ENSLCRG00005023120 ENSLCRG00005023122 ENSLCRG00005023125 ENSLCRG00005023128 NLRC5 (ENSLCRG00005023144) cpne2 (ENSLCRG00005023173) European seabass MODERN SPECIES 19 ENSDLAG00005027593 ENSDLAG00005003124 ENSDLAG00005018653 ENSDLAG00005027879 ENSDLAG00005015413 SLC10A7 (ENSDLAG00005015389) ENSDLAG00005033208 ENSDLAG00005032060 ENSDLAG00005012875 ENSDLAG00005018926 si:ch211-216l23.2 (ENSDLAG00005019148) znf423 (ENSDLAG00005008914) #18 si:ch211-212o1.2 (ENSDLAG00005008965) cbln1 (ENSDLAG00005031014) #20 ENSDLAG00005030791 #21 siah1 (ENSDLAG00005029137) #22 lonp2 (ENSDLAG00005009078) #23 il34 (ENSDLAG00005010454) sf3b3 (ENSDLAG00005010582) st3gal2 (ENSDLAG00005029110) aars1 (ENSDLAG00005010724) ENSDLAG00005010819 ENSDLAG00005011276 ENSDLAG00005010836 ENSDLAG00005029005 ENSDLAG00005028257 ENSDLAG00005011610 ENSDLAG00005032407 ENSDLAG00005011639 zpd (ENSDLAG00005011690) ENSDLAG00005030412 Gilthead seabream MODERN SPECIES 22 ENSSAUG00010011239 ENSSAUG00010011233 hsf4 (ENSSAUG00010011232) gnao1a (ENSSAUG00010011230) cbfb (ENSSAUG00010011222) phaf1 (ENSSAUG00010010869) B3GNT9 (ENSSAUG00010010868) bbs2 (ENSSAUG00010010815) setd6 (ENSSAUG00010010811) cnot1 (ENSSAUG00010010716) si:ch211-216l23.2 (ENSSAUG00010010711) znf423 (ENSSAUG00010010690) #18 si:ch211-212o1.2 (ENSSAUG00010010680) cbln1 (ENSSAUG00010010677) #20 n4bp1 (ENSSAUG00010010675) #21 siah1 (ENSSAUG00010010674) #22 lonp2 (ENSSAUG00010010661) #23 IL-34 (ENSSAUG00010010653) sf3b3 (ENSSAUG00010010637) st3gal2 (ENSSAUG00010010628) ENSSAUG00010010624 aars1 (ENSSAUG00010010615) exosc6 (ENSSAUG00010010607) ENSSAUG00010010565 MMP15 (ENSSAUG00010009516) zpd (ENSSAUG00010009515) nup93 (ENSSAUG00010009513) steep1 (ENSSAUG00010009510) mta (ENSSAUG00010009507) sc5d (ENSSAUG00010009503) anapc13 (ENSSAUG00010009501) Perciformes ANCESTRAL SPECIES 7 ENSGT00940000163301.d.a.a.i.b ENSGT00940000163301.d.a.b ENSGT00940000158063 ENSGT00940000155883.a.b.a.a ENSGT00390000018132 ENSGT00940000153528.a.a ENSGT00940000162243 ENSGT00390000017113 ENSGT00940000153577.C ENSGT00390000014869 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT00500000044916 ENSGT00940000157653 ENSGT00940000160652 ENSGT01010000222686 ENSGT00940000163461.a.a.a.b.c.g ENSGT00940000166578 ENSGT00940000165046.b ENSGT00950000183108.b.a.a.i.b ENSGT00950000182991.A.a.c.b Cottioidei ANCESTRAL SPECIES 6 ENSGT00940000156011 ENSGT01050000244866.C ENSGT00940000158063 ENSGT00940000155883.a.a ENSGT00940000155883.a.b.a.a ENSGT00390000018132 ENSGT00940000153528.a.a ENSGT00940000162243 ENSGT00390000017113 ENSGT00940000153577.C ENSGT00390000014869 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT00500000044916 ENSGT00940000157653 ENSGT00940000160652 ENSGT00940000163461.a.a.a.b.c.g ENSGT00940000166578 ENSGT00940000165046.b ENSGT00950000183108.b.a.a.i.b ENSGT00950000182991.A.a.c.b ENSGT00940000163228 Lumpfish MODERN SPECIES 21 ENSCLMG00005004107 ENSCLMG00005004109 ENSCLMG00005004110 ENSCLMG00005004112 ENSCLMG00005004113 ENSCLMG00005004114 ENSCLMG00005004116 ENSCLMG00005004117 ENSCLMG00005004119 setd6 (ENSCLMG00005004120) cnot1 (ENSCLMG00005004164) si:ch211-216l23.2 (ENSCLMG00005009214) znf423 (ENSCLMG00005009217) #18 cbln1 (ENSCLMG00005009219) #20 n4bp1 (ENSCLMG00005009220) #21 siah1 (ENSCLMG00005009221) #22 lonp2 (ENSCLMG00005009224) #23 il34 (ENSCLMG00005010624) sf3b3 (ENSCLMG00005010627) st3gal2 (ENSCLMG00005010644) aars1 (ENSCLMG00005010645) exosc6 (ENSCLMG00005010646) ENSCLMG00005010647 ENSCLMG00005010648 ENSCLMG00005010650 ENSCLMG00005010653 ENSCLMG00005010655 ENSCLMG00005010656 ENSCLMG00005010657 psme3ip1 (ENSCLMG00005010660) cpne2 (ENSCLMG00005010666) Stickleback MODERN SPECIES 14 trhr2 (ENSGACG00000002560) ENSGACG00000002565 ENSGACG00000002568 ENSGACG00000002572 ENSGACG00000002574 ENSGACG00000002579 ENSGACG00000002580 ENSGACG00000002581 ENSGACG00000002586 ENSGACG00000002591 setd6 (ENSGACG00000002601) cnot1 (ENSGACG00000002606) si:ch211-216l23.2 (ENSGACG00000002623) znf423 (ENSGACG00000002626) #18 n4bp1 (ENSGACG00000002633) #21 siah1 (ENSGACG00000002638) #22 lonp2 (ENSGACG00000002644) #23 sf3b3 (ENSGACG00000002646) st3gal2 (ENSGACG00000002651) aars1 (ENSGACG00000002667) exosc6 (ENSGACG00000002690) ENSGACG00000002692 ENSGACG00000002697 ENSGACG00000002702 ENSGACG00000002704 ENSGACG00000002706 ENSGACG00000002709 ENSGACG00000002713 ENSGACG00000002721 ENSGACG00000002722 ENSGACG00000002725 Perciformes_a ANCESTRAL SPECIES 7 ENSGT00940000163301.d.a.a.i.b ENSGT00940000163301.d.a.b ENSGT00940000158063 ENSGT00940000155883.a.b.a.a ENSGT00390000018132 ENSGT00940000153528.a.a ENSGT00940000162243 ENSGT00390000017113 ENSGT00940000153577.C ENSGT00390000014869 ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT01050000244866.C ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000157894 ENSGT00940000168208 ENSGT00390000008673 ENSGT00550000075101.r ENSGT00390000002197 ENSGT00950000182967 Pike perch MODERN SPECIES 122 ENSSLUG00000024352 cbfb (ENSSLUG00000024361) phaf1 (ENSSLUG00000024381) B3GNT9 (ENSSLUG00000002856) bbs2 (ENSSLUG00000002874) ENSSLUG00000002921 setd6 (ENSSLUG00000002928) cnot1 (ENSSLUG00000003445) ENSSLUG00000008091 ENSSLUG00000008096 znf423 (ENSSLUG00000008107) #18 si:ch211-212o1.2 (ENSSLUG00000008146) ENSSLUG00000008148 cbln1 (ENSSLUG00000008150) #20 n4bp1 (ENSSLUG00000008155) #21 siah1 (ENSSLUG00000008161) #22 lonp2 (ENSSLUG00000008190) #23 il34 (ENSSLUG00000008260) sf3b3 (ENSSLUG00000008290) Channel bull blenny MODERN SPECIES 20 ENSCGOG00000007652 ENSCGOG00000007647 ENSCGOG00000007645 ENSCGOG00000007644 ENSCGOG00000007639 ENSCGOG00000007637 ENSCGOG00000007633 setd6 (ENSCGOG00000007627) cnot1 (ENSCGOG00000003265) si:ch211-216l23.2 (ENSCGOG00000003120) znf423 (ENSCGOG00000002752) #18 si:ch211-212o1.2 (ENSCGOG00000002662) cbln1 (ENSCGOG00000002630) #20 ENSCGOG00000011165 n4bp1 (ENSCGOG00000011150) #21 siah1 (ENSCGOG00000011145) #22 lonp2 (ENSCGOG00000010849) #23 il34 (ENSCGOG00000010831) sf3b3 (ENSCGOG00000010201) st3gal2 (ENSCGOG00000010077) aars1 (ENSCGOG00000009939) exosc6 (ENSCGOG00000009928) ENSCGOG00000009923 ENSCGOG00000009921 ENSCGOG00000009915 ENSCGOG00000009888 ENSCGOG00000009876 ENSCGOG00000009857 ENSCGOG00000009842 ENSCGOG00000009806 ENSCGOG00000009801 Pinecone sodierfish MODERN SPECIES 20 nedd1 (ENSMMDG00005008728) hsf4 (ENSMMDG00005008729) ENSMMDG00005008734 cbfb (ENSMMDG00005008744) phaf1 (ENSMMDG00005008754) B3GNT9 (ENSMMDG00005008990) bbs2 (ENSMMDG00005008994) ENSMMDG00005009039 setd6 (ENSMMDG00005009061) cnot1 (ENSMMDG00005009076) si:ch211-216l23.2 (ENSMMDG00005009145) znf423 (ENSMMDG00005009159) #18 si:ch211-212o1.2 (ENSMMDG00005009201) cbln1 (ENSMMDG00005009207) #20 n4bp1 (ENSMMDG00005009211) #21 siah1 (ENSMMDG00005009216) #22 lonp2 (ENSMMDG00005009234) #23 il34 (ENSMMDG00005009474) sf3b3 (ENSMMDG00005009497) st3gal2 (ENSMMDG00005009521) aars1 (ENSMMDG00005009524) exosc6 (ENSMMDG00005009563) ENSMMDG00005009567 pllp (ENSMMDG00005009748) arl2bp (ENSMMDG00005009751) rspry1 (ENSMMDG00005009756) ENSMMDG00005009808 anapc13 (ENSMMDG00005009809) sc5d (ENSMMDG00005009811) ENSMMDG00005009816 sc5d (ENSMMDG00005009820) Cod MODERN SPECIES 22 ENSGMOG00000000021 ENSGMOG00000019752 mt2 (ENSGMOG00000026156) mt2 (ENSGMOG00000029639) mt2 (ENSGMOG00000024157) ENSGMOG00000033313 ENSGMOG00000026082 ENSGMOG00000012857 ENSGMOG00000012864 si:ch211-216l23.2 (ENSGMOG00000012886) znf423 (ENSGMOG00000012893) #18 ENSGMOG00000027870 si:ch211-212o1.2 (ENSGMOG00000024391) cbln1 (ENSGMOG00000026039) #20 n4bp1 (ENSGMOG00000012940) #21 siah1 (ENSGMOG00000013178) #22 lonp2 (ENSGMOG00000008136) #23 il34 (ENSGMOG00000029545) sf3b3 (ENSGMOG00000008139) st3gal2 (ENSGMOG00000008144) aars1 (ENSGMOG00000008147) ENSGMOG00000008151 chka (ENSGMOG00000017207) si:dkey-12e7.1 (ENSGMOG00000031062) anpeplb (ENSGMOG00000017152) arpin (ENSGMOG00000017134) ENSGMOG00000017129 ENSGMOG00000017107 ENSGMOG00000031123 gins3 (ENSGMOG00000007285) ndrg4 (ENSGMOG00000019419) Protacanthopterygii ANCESTRAL SPECIES 25 ENSGT00940000153533.b ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.f ENSGT00390000002381.b.d ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00530000064134.a.a ENSGT00960000187150 ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT00940000153348.A ENSGT01050000244866.C ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000157894 ENSGT00500000044916 ENSGT00940000157653 ENSGT00940000170853 ENSGT00390000017671.b ENSGT00940000155044.B Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 18 ENSGT00400000025006.c ENSGT00940000153533.b.d ENSGT00390000014299.f ENSGT00940000164450.b ENSGT00940000156938.f.c ENSGT00390000002381.b.d.a.b ENSGT00390000006293.s.a ENSGT00940000166270 ENSGT00390000005410.e ENSGT00940000155218.B.u.b ENSGT00940000158492.d #18 ENSGT00960000187150 ENSGT00940000163703.b.a ENSGT00940000159811.l #20 ENSGT00940000158682.f #21 ENSGT00940000154837.s #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336.f ENSGT00950000183151.a.a.b.b.a ENSGT00940000156356.e ENSGT00940000157335.o.a ENSGT00940000153348.A ENSGT01050000244866.C.q ENSGT00390000015052.d ENSGT00940000157894.c ENSGT00500000044916.hb ENSGT00940000157653.r ENSGT00940000160652.c ENSGT01100000263545.a.b.d.a.b ENSGT00390000017671.b.m ENSGT00940000155044.B Huchen MODERN SPECIES 983 n4bp1 (ENSHHUG00000036799) #21 siah1 (ENSHHUG00000036790) #22 lonp2 (ENSHHUG00000036674) #23 il34 (ENSHHUG00000036665) sf3b3 (ENSHHUG00000036627) st3gal2 (ENSHHUG00000036625) aars1 (ENSHHUG00000036575) exosc6 (ENSHHUG00000036569) ENSHHUG00000036527 arl2bp (ENSHHUG00000036513) rspry1 (ENSHHUG00000036497) psme3ip1 (ENSHHUG00000036477) cpne2 (ENSHHUG00000036438) ENSHHUG00000036415 Salmoninae_a ANCESTRAL SPECIES 13 ENSGT00390000010337.B.a.a.k ENSGT00400000025006.c ENSGT00940000153533.b.d ENSGT00390000014299.f ENSGT00940000164450.b ENSGT00940000156938.f.c ENSGT00390000002381.b.d.a.b ENSGT00390000006293.s.a ENSGT00940000166270 ENSGT00390000005410.e ENSGT00940000155218.B.u.b ENSGT00940000158492.d #18 ENSGT00940000163703.b.a ENSGT00940000159811.l #20 ENSGT00940000158682.f #21 ENSGT00940000154837.s #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336.f ENSGT00950000183151.a.a.b.b.a ENSGT00940000156356.e ENSGT00940000157335.o.a ENSGT00940000153348.A ENSGT01050000244866.C.q ENSGT00390000015052.d ENSGT00940000157894.c ENSGT00500000044916.hb ENSGT00940000157653.r ENSGT00940000160652.c ENSGT01100000263545.a.b.d.a.b ENSGT00390000017671.b.m ENSGT00940000155044.B Oncorhynchus ANCESTRAL SPECIES 10 ENSGT00390000010337.B.a.a.k ENSGT00400000025006.c ENSGT00940000153533.b.d ENSGT00390000014299.f ENSGT00940000164450.b ENSGT00940000156938.f.c ENSGT00390000002381.b.d.a.b ENSGT00390000006293.s.a ENSGT00940000166270.b ENSGT00390000005410.e ENSGT00940000155218.B.u.b ENSGT00940000158492.d #18 ENSGT00940000163703.b.a ENSGT00940000159811.l #20 ENSGT00940000158682.f #21 ENSGT00940000154837.s #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336.f ENSGT00950000183151.a.a.b.b.a ENSGT00940000156356.e ENSGT00940000157335.o.a ENSGT00940000153348.A.l ENSGT01050000244866.C.q ENSGT00390000015052.d ENSGT00940000157894.c ENSGT00500000044916.hb ENSGT00940000157653.r ENSGT00940000160652.c ENSGT01100000263545.a.b.d.a.b ENSGT00390000017671.b.m ENSGT00940000155044.B Oncorhynchus_a ANCESTRAL SPECIES 5 ENSGT00390000010337.B.a.a.k ENSGT00400000025006.c ENSGT00940000153533.b.d ENSGT00390000014299.f ENSGT00940000164450.b ENSGT00940000156938.f.c ENSGT00390000002381.b.d.a.b ENSGT00390000006293.s.a ENSGT00940000166270.b ENSGT00390000005410.e ENSGT00940000155218.B.u.b ENSGT00940000158492.d #18 ENSGT00940000163703.b.a ENSGT00940000159811.l #20 ENSGT00940000158682.f #21 ENSGT00940000154837.s #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336.f ENSGT00950000183151.a.a.b.b.a ENSGT00940000156356.e ENSGT00940000157335.o.a ENSGT00940000153348.A.l ENSGT01050000244866.C.q ENSGT00390000015052.d ENSGT00940000157894.c ENSGT00500000044916.hb ENSGT00940000157653.r ENSGT00940000160652.c ENSGT01100000263545.a.b.d.a.b ENSGT00390000017671.b.m ENSGT00940000155044.B Chinook salmon MODERN SPECIES 10 chtf8 (ENSOTSG00005004842) utp4 (ENSOTSG00005004844) wfdc1 (ENSOTSG00005004865) ENSOTSG00005004870 KCNG4 (ENSOTSG00005004873) ENSOTSG00005004874 hsbp1a (ENSOTSG00005004877) ENSOTSG00005004890 mlycd (ENSOTSG00005006582) ENSOTSG00005006583 znf423 (ENSOTSG00005006587) #18 si:ch211-212o1.2 (ENSOTSG00005006720) cbln1 (ENSOTSG00005006721) #20 n4bp1 (ENSOTSG00005006722) #21 ENSOTSG00005006723 siah1 (ENSOTSG00005006725) #22 lonp2 (ENSOTSG00005006732) #23 il34 (ENSOTSG00005007503) SF3B3 (ENSOTSG00005007510) st3gal2 (ENSOTSG00005007636) aars1 (ENSOTSG00005007642) exosc6 (ENSOTSG00005007645) ENSOTSG00005007646 arl2bp (ENSOTSG00005007647) rspry1 (ENSOTSG00005007648) psme3ip1 (ENSOTSG00005007651) cpne2 (ENSOTSG00005007653) ENSOTSG00005008496 cetp (ENSOTSG00005008540) herpud1 (ENSOTSG00005008548) slc12a3 (ENSOTSG00005008573) Coho salmon MODERN SPECIES 14 chtf8 (ENSOKIG00005049368) UTP4 (ENSOKIG00005049379) wfdc1 (ENSOKIG00005049409) ENSOKIG00005049412 kcng4a (ENSOKIG00005049415) ENSOKIG00005049417 hsbp1a (ENSOKIG00005049422) ENSOKIG00005049467 MLYCD (ENSOKIG00005049599) CDH13 (ENSOKIG00005049612) znf423 (ENSOKIG00005049662) #18 si:ch211-212o1.2 (ENSOKIG00005020137) ENSOKIG00005020146 cbln1 (ENSOKIG00005020158) #20 n4bp1 (ENSOKIG00005020175) #21 siah1 (ENSOKIG00005020183) #22 lonp2 (ENSOKIG00005020232) #23 il34 (ENSOKIG00005021228) sf3b3 (ENSOKIG00005021287) st3gal2 (ENSOKIG00005021531) aars1 (ENSOKIG00005021580) ENSOKIG00005021685 exosc6 (ENSOKIG00005021748) arl2bp (ENSOKIG00005021754) rspry1 (ENSOKIG00005021801) psme3ip1 (ENSOKIG00005021915) cpne2 (ENSOKIG00005021944) NLRC5 (ENSOKIG00005022165) cetp (ENSOKIG00005022284) herpud1 (ENSOKIG00005022313) slc12a3 (ENSOKIG00005022823) Rainbow trout MODERN SPECIES 11 ENSOMYG00000014805 ENSOMYG00000072865 ENSOMYG00000035277 ENSOMYG00000014815 ENSOMYG00000058043 ENSOMYG00000014942 ENSOMYG00000016528 ENSOMYG00000063042 ENSOMYG00000016533 ENSOMYG00000073276 znf423 (ENSOMYG00000016599) #18 ENSOMYG00000017270 si:ch211-212o1.2 (ENSOMYG00000017289) cbln1 (ENSOMYG00000017301) #20 n4bp1 (ENSOMYG00000017321) #21 siah1 (ENSOMYG00000017326) #22 lonp2 (ENSOMYG00000017458) #23 il34 (ENSOMYG00000019582) sf3b3 (ENSOMYG00000019657) st3gal2 (ENSOMYG00000019723) aars1 (ENSOMYG00000019782) ENSOMYG00000019841 ENSOMYG00000019851 ARL2BP (ENSOMYG00000019897) rspry1 (ENSOMYG00000019914) ENSOMYG00000061812 psme3ip1 (ENSOMYG00000019945) cpne2 (ENSOMYG00000020062) NLRC5 (ENSOMYG00000021005) ENSOMYG00000051993 ENSOMYG00000065324 Salmo ANCESTRAL SPECIES 36 ENSGT00940000153533.b.d ENSGT00390000014299.f ENSGT00940000164450.b ENSGT00940000156938.f.c ENSGT00390000002381.b.d.a.b ENSGT00390000006293.s.a ENSGT00940000166270 ENSGT00390000005410.e ENSGT00940000155218.B.u.b ENSGT00530000064134.a.a.b ENSGT00940000158492.d #18 ENSGT00960000187150 ENSGT00940000163703.b.a ENSGT00940000159811.l #20 ENSGT00940000158682.f #21 ENSGT00940000154837.s #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336.f ENSGT00950000183151.a.a.b.b.a ENSGT00940000156356.e ENSGT00940000157335.o.a ENSGT00940000153348.A ENSGT01050000244866.C.q ENSGT00390000015052.d ENSGT00940000157894.c ENSGT00500000044916.hb ENSGT00940000157653.r ENSGT00940000160652.c ENSGT01100000263545.a.b.d.a.b ENSGT00390000017671.b.m ENSGT00940000155044.B River trout MODERN SPECIES 37 kcng4a (ENSSTUG00000016954) ENSSTUG00000016942 HSBP1 (ENSSTUG00000016933) ENSSTUG00000016184 mlycd (ENSSTUG00000016132) ENSSTUG00000016119 ENSSTUG00000016107 CDH13 (ENSSTUG00000015797) si:ch211-216l23.2 (ENSSTUG00000015714) ENSSTUG00000015702 znf423 (ENSSTUG00000015504) #18 si:ch211-212o1.2 (ENSSTUG00000015431) cbln1 (ENSSTUG00000015416) #20 ENSSTUG00000015399 n4bp1 (ENSSTUG00000015391) #21 siah1 (ENSSTUG00000015386) #22 lonp2 (ENSSTUG00000013794) #23 il34 (ENSSTUG00000013615) sf3b3 (ENSSTUG00000013351) st3gal2 (ENSSTUG00000013304) aars1 (ENSSTUG00000012846) exosc6 (ENSSTUG00000012769) ENSSTUG00000012686 ENSSTUG00000012676 arl2bp (ENSSTUG00000012627) rspry1 (ENSSTUG00000012489) psme3ip1 (ENSSTUG00000012451) cpne2 (ENSSTUG00000010999) ENSSTUG00000010785 cetp (ENSSTUG00000010672) herpud1 (ENSSTUG00000010659) Atlantic salmon MODERN SPECIES 1 ENSSSAG00000098771 ENSSSAG00000047621 ENSSSAG00000047633 ENSSSAG00000096713 ENSSSAG00000047702 ENSSSAG00000091440 ENSSSAG00000069414 ENSSSAG00000083196 ENSSSAG00000084159 ENSSSAG00000094484 znf423 (ENSSSAG00000050870) #18 ENSSSAG00000051939 si:ch211-212o1.2 (ENSSSAG00000120241) cbln1 (ENSSSAG00000114338) #20 n4bp1 (ENSSSAG00000051964) #21 siah1 (ENSSSAG00000102245) #22 lonp2 (ENSSSAG00000052001) #23 il34 (ENSSSAG00000052184) sf3b3 (ENSSSAG00000052244) ENSSSAG00000089420 st3gal2 (ENSSSAG00000052514) aars1 (ENSSSAG00000052562) exosc6 (ENSSSAG00000052706) ENSSSAG00000118531 rspry1 (ENSSSAG00000052992) psme3ip1 (ENSSSAG00000053536) cpne2 (ENSSSAG00000053599) NLRC5 (ENSSSAG00000056446) cetp (ENSSSAG00000056455) herpud1 (ENSSSAG00000056479) slc12a3 (ENSSSAG00000056647) Salmoninae ANCESTRAL SPECIES 909 ENSGT00940000158492.c #18 ENSGT00940000163703.b.b ENSGT00940000159811.k #20 ENSGT00940000158682.e #21 ENSGT00940000154837.t #22 ENSGT00940000168336.e ENSGT00950000183151.a.a.b.a.a Salmoninae_a ANCESTRAL SPECIES 1 ENSGT00390000010337.B.a.a.l ENSGT00400000025006.d ENSGT00940000153533.b.c ENSGT00390000014299.e ENSGT00940000156938.f.d ENSGT00390000002381.b.d.a.a ENSGT00390000006293.s.b ENSGT00390000005410.f ENSGT00940000155218.B.u.a ENSGT00530000064134.a.a ENSGT00960000187150 ENSGT00940000158492.c #18 ENSGT00940000163703.b.b ENSGT00940000159811.k #20 ENSGT00940000158682.e #21 ENSGT00940000154837.t #22 ENSGT00940000168336.e ENSGT00950000183151.a.a.b.b.b ENSGT00940000156356.f ENSGT00940000157335.o.b ENSGT01050000244866.C.r ENSGT00940000156011 ENSGT00390000015052.c ENSGT00940000157894.d ENSGT00500000044916.ib ENSGT00940000157653.q ENSGT00940000160652.d ENSGT01100000263545.a.b.d.a.a ENSGT00390000017671.b.n ENSGT00390000016353.i ENSGT00950000182967.d Salmo ANCESTRAL SPECIES 9 ENSGT00940000166375.g.a ENSGT00390000010337.B.a.a.l ENSGT00400000025006.d ENSGT00940000153533.b.c ENSGT00390000014299.e ENSGT00940000156938.f.d ENSGT00390000002381.b.d.a.a ENSGT00390000006293.s.b ENSGT00390000005410.f ENSGT00940000155218.B.u.a ENSGT00530000064134.a.a.a ENSGT00940000158492.c #18 ENSGT00940000163703.b.b ENSGT00940000159811.k #20 ENSGT00940000158682.e #21 ENSGT00940000154837.t #22 ENSGT00940000168336.e ENSGT00950000183151.a.a.b.b.b ENSGT00940000156356.f ENSGT00940000157335.o.b ENSGT01050000244866.C.r ENSGT00940000156011 ENSGT00390000015052.c ENSGT00940000157894.d ENSGT00500000044916.ib ENSGT00940000157653.q ENSGT00940000160652.d ENSGT01100000263545.a.b.d.a.a ENSGT00390000017671.b.n ENSGT00390000016353.i ENSGT00950000182967.d River trout MODERN SPECIES 8 chtf8 (ENSSTUG00000019184) utp4 (ENSSTUG00000019208) wfdc1 (ENSSTUG00000019284) kcng4a (ENSSTUG00000019314) ENSSTUG00000019329 HSBP1 (ENSSTUG00000019337) ENSSTUG00000019354 mlycd (ENSSTUG00000019363) ENSSTUG00000019371 CDH13 (ENSSTUG00000023593) si:ch211-216l23.2 (ENSSTUG00000023651) znf423 (ENSSTUG00000023697) #18 si:ch211-212o1.2 (ENSSTUG00000023863) cbln1 (ENSSTUG00000023876) #20 n4bp1 (ENSSTUG00000023890) #21 siah1 (ENSSTUG00000023919) #22 il34 (ENSSTUG00000023937) ENSSTUG00000023966 st3gal2 (ENSSTUG00000023980) ENSSTUG00000024030 ENSSTUG00000024070 pllp (ENSSTUG00000024540) arl2bp (ENSSTUG00000024546) rspry1 (ENSSTUG00000024570) psme3ip1 (ENSSTUG00000024602) cpne2 (ENSSTUG00000024665) ENSSTUG00000025994 cetp (ENSSTUG00000026020) herpud1 (ENSSTUG00000026059) nup93 (ENSSTUG00000026085) bbs2 (ENSSTUG00000026261) Atlantic salmon MODERN SPECIES 7 ENSSSAG00000006069 has3 (ENSSSAG00000082559) ENSSSAG00000093260 ENSSSAG00000069460 wfdc1 (ENSSSAG00000069436) kcng4 (ENSSSAG00000069433) ENSSSAG00000069428 ENSSSAG00000050779 ENSSSAG00000108830 ENSSSAG00000069422 ENSSSAG00000050795 si:ch211-216l23.2 (ENSSSAG00000069403) znf423 (ENSSSAG00000069285) #18 cbln1 (ENSSSAG00000081747) #20 n4bp1 (ENSSSAG00000069262) #21 siah1 (ENSSSAG00000086790) #22 ENSSSAG00000089482 il34 (ENSSSAG00000118060) st3gal2 (ENSSSAG00000107909) ENSSSAG00000096684 pllp (ENSSSAG00000119995) rspry1 (ENSSSAG00000108455) psme3ip1 (ENSSSAG00000069121) cpne2 (ENSSSAG00000068562) nlrc5 (ENSSSAG00000068298) cetp (ENSSSAG00000068285) herpud1 (ENSSSAG00000095551) nup93 (ENSSSAG00000113886) bbs2 (ENSSSAG00000068189) ENSSSAG00000113537 phaf1 (ENSSSAG00000064390) Oncorhynchus ANCESTRAL SPECIES 2 ENSGT00400000025006.d ENSGT00940000153533.b.c ENSGT00390000014299.e ENSGT00940000156938.f.d ENSGT00390000002381.b.d.a.a ENSGT00390000006293.s.b ENSGT00940000166270.a ENSGT00390000005410.f ENSGT00940000155218.B.u.a ENSGT00530000064134.a.a ENSGT00960000187150 ENSGT00940000158492.c #18 ENSGT00940000163703.b.b ENSGT00940000159811.k #20 ENSGT00940000158682.e #21 ENSGT00940000154837.t #22 ENSGT00940000168336.e ENSGT00950000183151.a.a.b.a.a ENSGT00940000156356.f ENSGT00940000157335.o.b ENSGT01050000244866.C.r ENSGT00940000156011 ENSGT00390000015052.c ENSGT00940000157894.d ENSGT00500000044916.ib ENSGT00940000157653.q ENSGT01100000263545.a.b.d.a.a ENSGT00390000017671.b.n ENSGT00390000016353.i ENSGT00950000182967.d ENSGT00390000017113.a Rainbow trout MODERN SPECIES chtf8 (ENSOMYG00000036062) UTP4 (ENSOMYG00000036113) wfdc1 (ENSOMYG00000036223) ENSOMYG00000036233 ENSOMYG00000036241 ENSOMYG00000036248 mlycd (ENSOMYG00000012161) ENSOMYG00000012199 si:ch211-216l23.2 (ENSOMYG00000012305) znf423 (ENSOMYG00000012329) #18 ENSOMYG00000075868 si:ch211-212o1.2 (ENSOMYG00000012481) ENSOMYG00000050249 cbln1 (ENSOMYG00000012491) #20 n4bp1 (ENSOMYG00000012502) #21 siah1 (ENSOMYG00000012509) #22 il34 (ENSOMYG00000012523) st3gal2 (ENSOMYG00000012550) ENSOMYG00000052360 ENSOMYG00000055425 ENSOMYG00000012899 pllp (ENSOMYG00000013008) arl2bp (ENSOMYG00000013015) rspry1 (ENSOMYG00000013033) PSME3IP1 (ENSOMYG00000013046) cpne2 (ENSOMYG00000013172) ENSOMYG00000057086 herpud1 (ENSOMYG00000013648) nup93 (ENSOMYG00000013695) mta (ENSOMYG00000059738) bbs2 (ENSOMYG00000013781) Oncorhynchus_a ANCESTRAL SPECIES 1 ENSGT00990000211668 ENSGT00940000153533.b.c ENSGT00390000014299.e ENSGT00940000156938.f.d ENSGT00390000002381.b.d.a.a ENSGT00390000006293.s.b ENSGT00940000166270.a ENSGT00390000005410.f ENSGT00940000155218.B.u.a ENSGT00530000064134.a.a ENSGT00960000187150 ENSGT00940000158492.c #18 ENSGT00940000163703.b.b ENSGT00940000159811.k #20 ENSGT00940000158682.e #21 ENSGT00940000154837.t #22 ENSGT00940000168336.e ENSGT00950000183151.a.a.b.a.a ENSGT00940000156356.f ENSGT00940000157335.o.b ENSGT01050000244866.C.r ENSGT00940000156011 ENSGT00390000015052.c ENSGT00940000157894.d ENSGT00500000044916.ib ENSGT00940000157653.q ENSGT01100000263545.a.b.d.a.a ENSGT00390000017671.b.n ENSGT00390000016353.i ENSGT00950000182967.d ENSGT00390000017113.a Coho salmon MODERN SPECIES 24 wfdc1 (ENSOKIG00005000367) KCNG4 (ENSOKIG00005000375) ENSOKIG00005000382 HSBP1 (ENSOKIG00005000388) mlycd (ENSOKIG00005000395) CDH13 (ENSOKIG00005000416) ENSOKIG00005000438 ENSOKIG00005000444 si:ch211-216l23.2 (ENSOKIG00005000457) znf423 (ENSOKIG00005000521) #18 ENSOKIG00005000630 ENSOKIG00005000638 PEDS1 (ENSOKIG00005000644) cbln1 (ENSOKIG00005000656) #20 n4bp1 (ENSOKIG00005000667) #21 siah1 (ENSOKIG00005000677) #22 il34 (ENSOKIG00005000682) st3gal2 (ENSOKIG00005000690) ENSOKIG00005000712 pllp (ENSOKIG00005000731) arl2bp (ENSOKIG00005000741) rspry1 (ENSOKIG00005000757) psme3ip1 (ENSOKIG00005000778) cpne2 (ENSOKIG00005000863) cetp (ENSOKIG00005001018) herpud1 (ENSOKIG00005001027) nup93 (ENSOKIG00005001034) mt2 (ENSOKIG00005001044) bbs2 (ENSOKIG00005001080) B3GNT9 (ENSOKIG00005001133) phaf1 (ENSOKIG00005001149) Chinook salmon MODERN SPECIES 30 trhr2 (ENSOTSG00005042437) zc3h18 (ENSOTSG00005042440) ENSOTSG00005042446 has3 (ENSOTSG00005042447) ENSOTSG00005042448 utp4 (ENSOTSG00005042456) wfdc1 (ENSOTSG00005042494) kcng4a (ENSOTSG00005042495) CDH13 (ENSOTSG00005042499) ENSOTSG00005042500 si:ch211-216l23.2 (ENSOTSG00005042501) znf423 (ENSOTSG00005042504) #18 si:ch211-212o1.2 (ENSOTSG00005042537) cbln1 (ENSOTSG00005042542) #20 n4bp1 (ENSOTSG00005042545) #21 siah1 (ENSOTSG00005042548) #22 il34 (ENSOTSG00005042550) ENSOTSG00005042553 st3gal2 (ENSOTSG00005042555) aars1 (ENSOTSG00005042561) ENSOTSG00005042715 pllp (ENSOTSG00005042725) arl2bp (ENSOTSG00005042727) rspry1 (ENSOTSG00005042728) psme3ip1 (ENSOTSG00005042730) cpne2 (ENSOTSG00005042731) cetp (ENSOTSG00005043006) herpud1 (ENSOTSG00005028735) nup93 (ENSOTSG00005028745) mt2 (ENSOTSG00005028780) bbs2 (ENSOTSG00005028784) Huchen MODERN SPECIES 3056 n4bp1 (ENSHHUG00000021836) #21 siah1 (ENSHHUG00000021848) #22 il34 (ENSHHUG00000021857) ENSHHUG00000021867 ENSHHUG00000021870 Northern pike MODERN SPECIES 18 utp4 (ENSELUG00000014598) wfdc1 (ENSELUG00000014638) ENSELUG00000014724 kcng4a (ENSELUG00000014741) ENSELUG00000014782 ENSELUG00000014817 ENSELUG00000014854 mlycd (ENSELUG00000014870) CDH13 (ENSELUG00000014967) si:ch211-216l23.2 (ENSELUG00000015006) znf423 (ENSELUG00000015088) #18 si:ch211-212o1.2 (ENSELUG00000001443) cbln1 (ENSELUG00000015203) #20 ENSELUG00000015226 n4bp1 (ENSELUG00000015239) #21 siah1 (ENSELUG00000015250) #22 lonp2 (ENSELUG00000015292) #23 il34 (ENSELUG00000015316) sf3b3 (ENSELUG00000015417) st3gal2 (ENSELUG00000015453) aars1 (ENSELUG00000015496) exosc6 (ENSELUG00000015515) ENSELUG00000015558 pllp (ENSELUG00000015571) arl2bp (ENSELUG00000029347) rspry1 (ENSELUG00000015638) psme3ip1 (ENSELUG00000015668) cpne2 (ENSELUG00000015711) ENSELUG00000000589 cetp (ENSELUG00000015835) herpud1 (ENSELUG00000015860) Osteoglossiformes ANCESTRAL SPECIES 26 ENSGT00390000010337.B.a.a ENSGT00940000153533.b ENSGT00390000014299 ENSGT00940000164450.b ENSGT00940000156938.e ENSGT00390000002381.b ENSGT00390000006293 ENSGT00940000166270 ENSGT00390000005410 ENSGT00940000155218.B ENSGT00530000064134.a.a ENSGT00940000158492 #18 ENSGT00940000163703.b ENSGT00940000159811 #20 ENSGT00940000158682 #21 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 ENSGT00940000168336.i ENSGT00950000183151.a.a.b ENSGT00940000154065.a ENSGT00940000156356.a ENSGT00940000157335.i ENSGT01050000244866.C ENSGT00390000010260 ENSGT00940000156011.cb ENSGT00390000015052 ENSGT00940000157894 ENSGT00940000157653.w ENSGT01100000263545.a.b.d.a ENSGT00390000017671.b ENSGT00940000155044.B P. kingsleyae DUPLICATION P. kingsleyae MODERN SPECIES 175 ciapin1 (ENSPKIG00000020811) prmt7 (ENSPKIG00000020866) ENSPKIG00000020942 septin15 (ENSPKIG00000021214) ndrg4 (ENSPKIG00000021595) ZNRF1 (ENSPKIG00000021624) ENSPKIG00000021647 ca5a (ENSPKIG00000021682) SLC7A5 (ENSPKIG00000021715) cotl1 (ENSPKIG00000021758) CMIP (ENSPKIG00000021798) ENSPKIG00000021870 chtf8 (ENSPKIG00000021900) hsbp1b (ENSPKIG00000021926) cbln1 (ENSPKIG00000021941) #20 siah1 (ENSPKIG00000021953) #22 il34 (ENSPKIG00000021971) st3gal2 (ENSPKIG00000021996) exosc6 (ENSPKIG00000022020) pllp (ENSPKIG00000022030) psme3ip1 (ENSPKIG00000022049) ENSPKIG00000022067 CPNE2 (ENSPKIG00000022107) ENSPKIG00000022182 nup93 (ENSPKIG00000022268) mt2 (ENSPKIG00000022445) CBFB (ENSPKIG00000022466) GNAO1 (ENSPKIG00000022508) nudt21 (ENSPKIG00000022541) pdcd2l (ENSPKIG00000022557) lto1 (ENSPKIG00000022620) P. kingsleyae MODERN SPECIES 23 zc3h18 (ENSPKIG00000003664) ENSPKIG00000003637 TANGO6 (ENSPKIG00000003592) has3 (ENSPKIG00000003565) utp4 (ENSPKIG00000003525) wfdc1 (ENSPKIG00000003498) KCNG4 (ENSPKIG00000003478) ENSPKIG00000003451 ENSPKIG00000003361 mlycd (ENSPKIG00000003317) CDH13 (ENSPKIG00000003185) ENSPKIG00000003080 #29 znf423 (ENSPKIG00000003000) #18 cbln1 (ENSPKIG00000002929) #20 n4bp1 (ENSPKIG00000002908) #21 siah1 (ENSPKIG00000002893) #22 lonp2 (ENSPKIG00000002838) #23 il34 (ENSPKIG00000002808) sf3b3 (ENSPKIG00000002712) cog4 (ENSPKIG00000002644) st3gal2 (ENSPKIG00000002618) aars1 (ENSPKIG00000002593) ENSPKIG00000002572 tmppe (ENSPKIG00000002552) PLLP (ENSPKIG00000002530) arl2bp (ENSPKIG00000002514) rspry1 (ENSPKIG00000002468) cpne2 (ENSPKIG00000002365) cetp (ENSPKIG00000002300) herpud1 (ENSPKIG00000002281) slc12a3 (ENSPKIG00000002184) Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES 1 trip12 (ENSSFOG00015016991) fbxo36b (ENSSFOG00015017082) ENSSFOG00015017088 RASA2 (ENSSFOG00015017105) ENSSFOG00015017168 ENSSFOG00015017219 atp1b3b (ENSSFOG00015017231) ece2b (ENSSFOG00015017271) ANO7 (ENSSFOG00015017392) rnf168 (ENSSFOG00015017412) ENSSFOG00015017442 P2RY14 (ENSSFOG00015017540) GPR171 (ENSSFOG00015017546) clrn1 (ENSSFOG00015017554) MINDY4B (ENSSFOG00015017562) ENSSFOG00015009785 #22 tsen34 (ENSSFOG00015017579) selenot1a (ENSSFOG00015017602) eif2a (ENSSFOG00015017634) PCYT1A (ENSSFOG00015017682) mmp23bb (ENSSFOG00015017722) ap2m1a (ENSSFOG00015017743) DVL3 (ENSSFOG00015017762) rnpepl1 (ENSSFOG00015017828) abcc5 (ENSSFOG00015017938) rpl35a (ENSSFOG00015017998) ENSSFOG00015018008 LRCH3 (ENSSFOG00015018030) ABCF3 (ENSSFOG00015018075) ENSSFOG00015018158 ENSSFOG00015018169 Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES ENSSFOG00015012341 cdk10 (ENSSFOG00015012269) chst6 (ENSSFOG00015012252) tmem231 (ENSSFOG00015012221) ciapin1 (ENSSFOG00015012188) prmt7 (ENSSFOG00015012160) ENSSFOG00015012145 NDRG4 (ENSSFOG00015012123) csnk2a2a (ENSSFOG00015024524) ZNF319 (ENSSFOG00015012089) ENSSFOG00015012082 ENSSFOG00015012072 chtf8 (ENSSFOG00015012056) KCNG4 (ENSSFOG00015012046) hsbp1b (ENSSFOG00015012008) siah1 (ENSSFOG00015012000) #22 il34 (ENSSFOG00015011985) ENSSFOG00015011959 aars1 (ENSSFOG00015011897) exosc6 (ENSSFOG00015030267) pllp (ENSSFOG00015027318) psme3ip1 (ENSSFOG00015011789) ENSSFOG00015011595 ENSSFOG00015027875 ENSSFOG00015011552 nup93 (ENSSFOG00015011462) cbfb (ENSSFOG00015011379) nudt21 (ENSSFOG00015011349) ENSSFOG00015011321 bcar1 (ENSSFOG00015011305) ENSSFOG00015011270 Asian bonytongue MODERN SPECIES 22 has3 (ENSSFOG00015028764) utp4 (ENSSFOG00015022605) wfdc1 (ENSSFOG00015022596) ENSSFOG00015022589 KCNG4 (ENSSFOG00015022581) ENSSFOG00015022575 hsbp1b (ENSSFOG00015022571) ENSSFOG00015022564 mlycd (ENSSFOG00015012486) CDH13 (ENSSFOG00015012506) si:ch211-216l23.2 (ENSSFOG00015012576) znf423 (ENSSFOG00015012603) #18 si:ch211-212o1.2 (ENSSFOG00015012664) cbln1 (ENSSFOG00015027918) #20 n4bp1 (ENSSFOG00015012741) #21 siah1 (ENSSFOG00015012754) #22 lonp2 (ENSSFOG00015012780) #23 ENSSFOG00015012848 sf3b3 (ENSSFOG00015012877) cog4 (ENSSFOG00015012985) st3gal2 (ENSSFOG00015030555) aars1 (ENSSFOG00015013147) ENSSFOG00015013258 tmppe (ENSSFOG00015013317) PLLP (ENSSFOG00015027025) arl2bp (ENSSFOG00015032410) rspry1 (ENSSFOG00015013378) cpne2 (ENSSFOG00015013468) cetp (ENSSFOG00015013540) herpud1 (ENSSFOG00015013575) slc12a3 (ENSSFOG00015013603) Elephant shark DUPLICATION Elephant shark MODERN SPECIES 1497 ENSCMIG00000017279 sall1a (ENSCMIG00000017277) CYLD (ENSCMIG00000017244) #8 SNX20 (ENSCMIG00000017213) #10 NKD1 (ENSCMIG00000017202) #11 brd7 (ENSCMIG00000017192) #12 adcy7 (ENSCMIG00000017109) #13 tent4b (ENSCMIG00000017040) #14 heatr3 (ENSCMIG00000016973) #15 cnep1r1 (ENSCMIG00000016930) #16 ENSCMIG00000016927 ZNF423 (ENSCMIG00000016919) #18 si:ch211-212o1.2 (ENSCMIG00000016904) cbln1 (ENSCMIG00000016899) #20 n4bp1 (ENSCMIG00000016891) #21 siah1 (ENSCMIG00000016883) #22 lonp2 (ENSCMIG00000016870) #23 ABCC12 (ENSCMIG00000016776) #25 PHKB (ENSCMIG00000016319) #27 ITFG1 (ENSCMIG00000016086) #28 NETO2 (ENSCMIG00000016078) #29 dnaja2b (ENSCMIG00000016017) #31 ENSCMIG00000015989 gpt2 (ENSCMIG00000015920) #32 zgc:92818 (ENSCMIG00000015858) #33 ENSCMIG00000015853 #34 orc6 (ENSCMIG00000015840) #35 vps35 (ENSCMIG00000015825) #36 SHCBP1 (ENSCMIG00000015820) #37 uqcrfs1 (ENSCMIG00000015813) ENSCMIG00000015803 Elephant shark MODERN SPECIES 1512 ENSCMIG00000016980 ENSCMIG00000016984 ENSCMIG00000016989 ENSCMIG00000016991 MCTP1 (ENSCMIG00000017020) ENSCMIG00000017061 SKIC3 (ENSCMIG00000017071) arsk (ENSCMIG00000017086) ENSCMIG00000017089 ENSCMIG00000017094 RHOBTB3 (ENSCMIG00000017101) glrx (ENSCMIG00000017111) ELL2 (ENSCMIG00000017123) ENSCMIG00000017147 pcsk1 (ENSCMIG00000017174) siah1 (ENSCMIG00000017214) #22 ENSCMIG00000017241 erap2 (ENSCMIG00000017391) erap2 (ENSCMIG00000017479) erap2 (ENSCMIG00000017493) lnpep (ENSCMIG00000017542) ENSCMIG00000017601 lix1 (ENSCMIG00000017605) riok2 (ENSCMIG00000017639) rgmb (ENSCMIG00000017670) ENSCMIG00000017677 chd1 (ENSCMIG00000017733) FAM174A (ENSCMIG00000017820) st8sia4 (ENSCMIG00000017825) ENSCMIG00000017827 SLCO4C1 (ENSCMIG00000017833) Cyclostomata ANCESTRAL SPECIES 592 ENSGT00940000154837 #22 ENSGT00530000063553.b.b #23 Lamprey MODERN SPECIES 2 ENSPMAG00000001607 twsg1a (ENSPMAG00000001612) hydin (ENSPMAG00000001615) ENSPMAG00000001642 mbtps1 (ENSPMAG00000001643) siah1 (ENSPMAG00000001685) #22 lonp2 (ENSPMAG00000001687) #23 st3gal2 (ENSPMAG00000001703) got2b (ENSPMAG00000001719) ENSPMAG00000001742 MMP24 (ENSPMAG00000001746) Hagfish DUPLICATION Hagfish MODERN SPECIES 659 ENSEBUG00000011725 ENSEBUG00000015961 ENSEBUG00000005568 ENSEBUG00000000828 ENSEBUG00000014391 ENSEBUG00000011053 ENSEBUG00000004126 ENSEBUG00000010836 ENSEBUG00000014507 SLC7A9 (ENSEBUG00000004655) ENSEBUG00000013901 ENSEBUG00000010615 SLC7A5 (ENSEBUG00000002211) ENSEBUG00000006096 ENSEBUG00000016091 ENSEBUG00000001264 #22 ENSEBUG00000007954 ENSEBUG00000011189 Hagfish DUPLICATION Hagfish DUPLICATION Hagfish DUPLICATION Hagfish MODERN SPECIES 483 ENSEBUG00000011251 ENSEBUG00000013349 ENSEBUG00000010483 siah1 (ENSEBUG00000009592) #22 ENSEBUG00000005227 ENSEBUG00000014837 siah1 (ENSEBUG00000012429) #22 siah1 (ENSEBUG00000010011) #22 ENSEBUG00000002868 ENSEBUG00000015504 ENSEBUG00000015159 ENSEBUG00000015364 ENSEBUG00000009008 DNAH12 (ENSEBUG00000005802) tmf1 (ENSEBUG00000013082) ENSEBUG00000012894 Hagfish MODERN SPECIES 483 ENSEBUG00000012894 tmf1 (ENSEBUG00000013082) DNAH12 (ENSEBUG00000005802) ENSEBUG00000009008 ENSEBUG00000015364 ENSEBUG00000015159 ENSEBUG00000015504 ENSEBUG00000002868 siah1 (ENSEBUG00000010011) #22 siah1 (ENSEBUG00000012429) #22 ENSEBUG00000014837 ENSEBUG00000005227 siah1 (ENSEBUG00000009592) #22 ENSEBUG00000010483 ENSEBUG00000013349 ENSEBUG00000011251 Hagfish MODERN SPECIES 483 ENSEBUG00000012894 tmf1 (ENSEBUG00000013082) DNAH12 (ENSEBUG00000005802) ENSEBUG00000009008 ENSEBUG00000015364 ENSEBUG00000015159 ENSEBUG00000015504 ENSEBUG00000002868 siah1 (ENSEBUG00000010011) #22 siah1 (ENSEBUG00000012429) #22 ENSEBUG00000014837 ENSEBUG00000005227 siah1 (ENSEBUG00000009592) #22 ENSEBUG00000010483 ENSEBUG00000013349 ENSEBUG00000011251 Hagfish MODERN SPECIES 576 ENSEBUG00000009323 ENSEBUG00000006766 ENSEBUG00000002503 siah1 (ENSEBUG00000000306) #22 lonp2 (ENSEBUG00000015038) #23 rspry1 (ENSEBUG00000006321) ENSEBUG00000009735 ctsa (ENSEBUG00000003539)