Gnathostomata ANCESTRAL SPECIES 354 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00390000006492 #10 ENSGT00940000159565 #9 ENSGT00940000157424 ENSGT00940000153222.a.b.b.b.b ENSGT00510000047611 Euteleostomi ANCESTRAL SPECIES 204 ENSGT00940000155128.a.a.b ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000165859 ENSGT00940000159565 #9 ENSGT00940000175781 ENSGT00940000159625 #8 ENSGT00940000153222.a.b.b.b.b ENSGT00940000163684 ENSGT00950000182887.C.b.b ENSGT00940000166245 ENSGT01030000234621.C.a.a.a ENSGT00940000155435.B ENSGT00950000182887.C.b.a ENSGT00940000175729 ENSGT00940000153936.a ENSGT00940000156202.a Sarcopterygii ANCESTRAL SPECIES 538 ENSGT00940000159429 #20 ENSGT00940000155128.a.a.b ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085 #22 ENSGT00440000040163 Tetrapoda ANCESTRAL SPECIES 72 ENSGT00940000159334 #12 ENSGT00950000183168.C ENSGT00510000049291 #13 ENSGT00940000164309 ENSGT01100000265889 ENSGT01030000234513.B.a #17 ENSGT01030000235750 ENSGT01050000244864.B.a ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000167446 ENSGT00940000159429 #20 ENSGT00940000155128.a.a.b ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085 #22 ENSGT00440000040163 Amniota DUPLICATION Amniota ANCESTRAL SPECIES 24 ENSGT00940000159334 #12 ENSGT00950000183168.C ENSGT00510000049291 #13 ENSGT00940000164309 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT01030000235750 ENSGT01050000244864.B.a ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000167446 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 Mammalia ANCESTRAL SPECIES 40 ENSGT00940000159565 #9 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 Theria ANCESTRAL SPECIES 33 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00940000156837 #27 ENSGT00510000047029 #26 ENSGT00950000182963.b.b #25 ENSGT00390000005569.w.a ##28 ENSGT00390000005569.x #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000160940 ENSGT00940000159479 ENSGT00940000164406 ENSGT00940000160459 ENSGT00940000153313.C.a Eutheria ANCESTRAL SPECIES 16 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.b ##28 ENSGT00390000005569.x.a.b #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000163063 ENSGT00940000160311 ENSGT00940000163372 Boreoeutheria ANCESTRAL SPECIES 11 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00410000029400 ENSGT00940000163063 ENSGT00940000160311 ENSGT00940000163372 Euarchontoglires ANCESTRAL SPECIES 11 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00410000029400 ENSGT00940000163063 ENSGT00940000160311 ENSGT00940000163372 Euarchontoglires_A ANCESTRAL SPECIES 11 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442.sc #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000163063 ENSGT00410000029400 ENSGT00940000160311 ENSGT00940000163372 ENSGT00940000162554 Glires ANCESTRAL SPECIES 10 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442.sc.b ##19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000163063 ENSGT00410000029400 ENSGT00940000160311 ENSGT00940000163372 ENSGT00920000150764.a Rodentia ANCESTRAL SPECIES 10 ENSGT00940000159565 #9 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442.sc.b ##19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000163063 ENSGT00410000029400 ENSGT00940000160311 ENSGT00940000163372 ENSGT00920000150764.a Rodentia_B ANCESTRAL SPECIES 16 ENSGT00940000159625 #8 ENSGT00940000159565 #9 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442.sc.b ##19 ENSGT00940000159429 #20 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000163063 ENSGT00410000029400 ENSGT00940000160311 ENSGT00940000163372 ENSGT00940000162554 Myomorpha ANCESTRAL SPECIES 6 ENSGT00940000159625 #8 ENSGT00940000159565 #9 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442.sc.b ##19 ENSGT00940000159429 #20 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00950000182963.b.b #25 ENSGT00940000163191 #24 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000163063 ENSGT00410000029400 ENSGT00940000160311 ENSGT00940000163372 ENSGT00940000162554 Muroidea ANCESTRAL SPECIES 50 ENSGT00940000159565 #9 ENSGT00390000006492 #10 ENSGT00940000165859 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442.sc.b ##19 ENSGT00940000159429 #20 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00950000182963.b.b #25 ENSGT00940000163191 #24 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000163063 ENSGT00410000029400 ENSGT00940000160311 ENSGT00940000163372 ENSGT00940000162554 Muroidea_A ANCESTRAL SPECIES 7 ENSGT00940000159625 #8 ENSGT00940000159565 #9 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442.sc.b ##19 ENSGT00940000159429 #20 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252.c.a.b ENSGT00390000015252.c.a.a ENSGT00390000015252.d ENSGT00950000182963.b.b #25 ENSGT00940000163191 #24 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000168699 ENSGT00410000029400 ENSGT00940000163063 Cricetidae ANCESTRAL SPECIES 8 ENSGT00940000159625 #8 ENSGT00940000159565 #9 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442.sc.b ##19 ENSGT00940000159429 #20 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252.c.a.b ENSGT00390000015252.c.a.a ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000168699 ENSGT00410000029400 ENSGT00940000163063 ENSGT00900000143537 Cricetidae_B ANCESTRAL SPECIES 54 ENSGT00940000159625 #8 ENSGT00940000159565 #9 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442.sc.b ##19 ENSGT00940000159429 #20 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252.c.a.b ENSGT00390000015252.c.a.a ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000168699 ENSGT00410000029400 ENSGT00940000163063 ENSGT00900000143537 Prairie vole MODERN SPECIES 360 ENSMOCG00000005746 #7 Gdpd2 (ENSMOCG00000021168) #8 Dlg3 (ENSMOCG00000015839) #9 Tex11 (ENSMOCG00000017235) #10 Snx12 (ENSMOCG00000001926) #11 Foxo4 (ENSMOCG00000018069) #12 Gm614 (ENSMOCG00000016704) #13 Il2rg (ENSMOCG00000011326) #14 Med12 (ENSMOCG00000013807) #15 Nlgn3 (ENSMOCG00000015847) #16 Gjb1 (ENSMOCG00000009230) #17 Zmym3 (ENSMOCG00000007682) #18 ENSMOCG00000005532 #19 Itgb1bp2 (ENSMOCG00000021266) #20 Taf1 (ENSMOCG00000001297) #21 Ogt (ENSMOCG00000013563) #22 Cxcr3 (ENSMOCG00000007041) #23 Rtl5 (ENSMOCG00000000142) #24 Nhsl2 (ENSMOCG00000002880) #25 ENSMOCG00000000929 #26 Ercc6l (ENSMOCG00000021344) #27 ENSMOCG00000014451 #28 Cited1 (ENSMOCG00000013938) #29 Hdac8 (ENSMOCG00000019902) #30 Phka1 (ENSMOCG00000013482) #31 ENSMOCG00000015005 #32 Ctag2 (ENSMOCG00000017014) #33 ENSMOCG00000014952 #34 Slitrk4 (ENSMOCG00000008180) #35 ENSMOCG00000017215 #36 Magec2 (ENSMOCG00000016294) #37 Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES Chrna7 (ENSPEMG00000015506) ENSPEMG00000027042 ENSPEMG00000024469 Mkrn3 (ENSPEMG00000009895) Magel2 (ENSPEMG00000025417) Ndn (ENSPEMG00000001158) ENSPEMG00000026068 ENSPEMG00000000510 ENSPEMG00000019573 ENSPEMG00000025848 ENSPEMG00000028866 ENSPEMG00000029784 ENSPEMG00000024562 ENSPEMG00000027816 ENSPEMG00000027080 ENSPEMG00000025968 #22 Mrgprx1 (ENSPEMG00000007777) ENSPEMG00000022426 ENSPEMG00000021299 Ptpn5 (ENSPEMG00000022553) Tmem86a (ENSPEMG00000024287) ENSPEMG00000023153 ENSPEMG00000021660 Misfa (ENSPEMG00000021845) Uevld (ENSPEMG00000012328) ENSPEMG00000022662 ENSPEMG00000022031 ENSPEMG00000011562 ENSPEMG00000013216 ENSPEMG00000028549 ENSPEMG00000019594 Northern American deer mouse MODERN SPECIES 475 Tex11 (ENSPEMG00000024188) #10 Slc7a3 (ENSPEMG00000011675) Snx12 (ENSPEMG00000013660) #11 ENSPEMG00000027735 Foxo4 (ENSPEMG00000013500) #12 Gm614 (ENSPEMG00000000266) #13 Il2rg (ENSPEMG00000002794) #14 Med12 (ENSPEMG00000023189) #15 Nlgn3 (ENSPEMG00000023260) #16 Gjb1 (ENSPEMG00000023611) #17 Zmym3 (ENSPEMG00000022158) #18 Nono (ENSPEMG00000011150) ##19 Itgb1bp2 (ENSPEMG00000004183) #20 ENSPEMG00000029064 Taf1 (ENSPEMG00000011524) #21 Ogt (ENSPEMG00000012399) #22 Cxcr3 (ENSPEMG00000018113) #23 Gm4779 (ENSPEMG00000015753) 8030474K03Rik (ENSPEMG00000028164) Rtl5 (ENSPEMG00000028195) #24 Nhsl2 (ENSPEMG00000006950) #25 Pin4 (ENSPEMG00000009326) #26 Ercc6l (ENSPEMG00000007920) #27 ENSPEMG00000016482 #28 Cited1 (ENSPEMG00000004332) #29 ENSPEMG00000029011 Hdac8 (ENSPEMG00000013611) #30 Phka1 (ENSPEMG00000007806) #31 ENSPEMG00000014842 ENSPEMG00000016284 Dmrtc1b (ENSPEMG00000013412) Cricetinae ANCESTRAL SPECIES 17 ENSGT00940000159625 #8 ENSGT00940000159565 #9 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442.sc.b ##19 ENSGT00940000159429 #20 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT01050000244848.B.a.b #23 ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.b.b ##28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000163063 ENSGT00940000168699 ENSGT00940000156489.m ENSGT00940000160311 ENSGT00940000163372 ENSGT00940000162554 Chinese hamster chok1gshd MODERN SPECIES 16 Gm4779 (ENSCGRG00001010077) 8030474K03Rik (ENSCGRG00001022034) Ogt (ENSCGRG00001011594) #22 ENSCGRG00001014167 Cxcr3 (ENSCGRG00001013701) #23 ENSCGRG00001012656 Rtl5 (ENSCGRG00001010452) #24 Nhsl2 (ENSCGRG00001018292) #25 Pin4 (ENSCGRG00001023057) #26 Ercc6l (ENSCGRG00001016668) #27 Rps4x (ENSCGRG00001018159) ##28 Cited1 (ENSCGRG00001022122) #29 Hdac8 (ENSCGRG00001022455) #30 Phka1 (ENSCGRG00001020129) #31 ENSCGRG00001024855 Dmrtc1a (ENSCGRG00001018624) ENSCGRG00001023387 Nap1l2 (ENSCGRG00001003632) Golden Hamster DUPLICATION Golden Hamster DUPLICATION Golden Hamster MODERN SPECIES 727 Gdpd2 (ENSMAUG00000019667) #8 Dlg3 (ENSMAUG00000000856) #9 Tex11 (ENSMAUG00000005559) #10 Slc7a3 (ENSMAUG00000002237) Snx12 (ENSMAUG00000020702) #11 Foxo4 (ENSMAUG00000019650) #12 Gm614 (ENSMAUG00000021631) #13 Il2rg (ENSMAUG00000011396) #14 Med12 (ENSMAUG00000020706) #15 Nlgn3 (ENSMAUG00000004367) #16 Gjb1 (ENSMAUG00000011973) #17 Zmym3 (ENSMAUG00000015148) #18 Nono (ENSMAUG00000016243) ##19 Itgb1bp2 (ENSMAUG00000007311) #20 Taf1 (ENSMAUG00000018664) #21 ENSMAUG00000010446 #22 ENSMAUG00000015275 #22 Cxcr3 (ENSMAUG00000006658) #23 ENSMAUG00000007111 Nhsl2 (ENSMAUG00000013469) #25 Rtl5 (ENSMAUG00000009321) #24 Pin4 (ENSMAUG00000015251) #26 Rps4x (ENSMAUG00000013223) #28 Cited1 (ENSMAUG00000020556) #29 Hdac8 (ENSMAUG00000006310) #30 ENSMAUG00000008738 #31 Dmrtc1b (ENSMAUG00000010338) Golden Hamster MODERN SPECIES 727 Dlg3 (ENSMAUG00000000856) #9 Tex11 (ENSMAUG00000005559) #10 Slc7a3 (ENSMAUG00000002237) Snx12 (ENSMAUG00000020702) #11 Foxo4 (ENSMAUG00000019650) #12 Gm614 (ENSMAUG00000021631) #13 Il2rg (ENSMAUG00000011396) #14 Med12 (ENSMAUG00000020706) #15 Nlgn3 (ENSMAUG00000004367) #16 Gjb1 (ENSMAUG00000011973) #17 Zmym3 (ENSMAUG00000015148) #18 Nono (ENSMAUG00000016243) ##19 Itgb1bp2 (ENSMAUG00000007311) #20 Taf1 (ENSMAUG00000018664) #21 ENSMAUG00000010446 #22 ENSMAUG00000015275 #22 Cxcr3 (ENSMAUG00000006658) #23 ENSMAUG00000007111 Nhsl2 (ENSMAUG00000013469) #25 Rtl5 (ENSMAUG00000009321) #24 Pin4 (ENSMAUG00000015251) #26 Rps4x (ENSMAUG00000013223) #28 Cited1 (ENSMAUG00000020556) #29 Hdac8 (ENSMAUG00000006310) #30 ENSMAUG00000008738 #31 Dmrtc1b (ENSMAUG00000010338) Golden Hamster MODERN SPECIES 901 Mkrn3 (ENSMAUG00000016158) Magel2 (ENSMAUG00000015002) Ndn (ENSMAUG00000016570) ENSMAUG00000015315 #22 Murinae ANCESTRAL SPECIES 14 ENSGT00940000159565 #9 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979.c.b #14 ENSGT00510000048979.c.a #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442.sc.b ##19 ENSGT00940000159429 #20 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252.c.a.a ENSGT00390000015252.d ENSGT00950000182963.b.b #25 ENSGT00940000163191 #24 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000168699 ENSGT00410000029400 ENSGT00940000163063 ENSGT00520000059967 Rat MODERN SPECIES 46 Kif4a (ENSRNOG00000038035) Gdpd2 (ENSRNOG00000002800) #8 Dlg3 (ENSRNOG00000002767) #9 Tex11 (ENSRNOG00000025672) #10 Slc7a3 (ENSRNOG00000004133) Snx12 (ENSRNOG00000004036) #11 Foxo4 (ENSRNOG00000033316) #12 CXHXorf65 (ENSRNOG00000003954) #14 Med12 (ENSRNOG00000003848) #15 Nlgn3 (ENSRNOG00000003812) #16 Gjb1 (ENSRNOG00000063213) #17 Zmym3 (ENSRNOG00000003707) #18 Nono (ENSRNOG00000003689) ##19 Itgb1bp2 (ENSRNOG00000003596) #20 Taf1 (ENSRNOG00000002565) #21 Ogt (ENSRNOG00000003359) #22 LOC102548506 (ENSRNOG00000066689) Cxcr3 (ENSRNOG00000003305) #23 LOC102553785 (ENSRNOG00000025200) Cxhxorf49 (ENSRNOG00000025211) LOC102555994 (ENSRNOG00000060462) Nhsl2 (ENSRNOG00000037951) #25 Rtl5 (ENSRNOG00000045779) #24 Pin4 (ENSRNOG00000050051) #26 Ercc6l (ENSRNOG00000003208) #27 Rps4x (ENSRNOG00000003201) ##28 Cited1 (ENSRNOG00000003189) #29 Hdac8 (ENSRNOG00000003122) #30 Phka1 (ENSRNOG00000003063) #31 LOC679960 (ENSRNOG00000003062) AABR07039229.2 (ENSRNOG00000048295) Mus ANCESTRAL SPECIES 9 ENSGT00940000159565 #9 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979.c.b #14 ENSGT00510000048979.c.a #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442.sc.b ##19 ENSGT00940000159429 #20 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252.c.a.a ENSGT00390000015252.d ENSGT00950000182963.b.b #25 ENSGT00940000163191 #24 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000168699 ENSGT00410000029400 ENSGT00940000163063 ENSGT00520000059967 Shrew mouse MODERN SPECIES 23 Dlg3 (MGP_PahariEiJ_G0031814) #9 Tex11 (MGP_PahariEiJ_G0031815) #10 Slc7a3 (MGP_PahariEiJ_G0031816) Snx12 (MGP_PahariEiJ_G0031817) #11 Foxo4 (MGP_PahariEiJ_G0031818) #12 Gm614 (MGP_PahariEiJ_G0031819) #13 MGP_PahariEiJ_G0031820 #14 Il2rg (MGP_PahariEiJ_G0031821) #14 Med12 (MGP_PahariEiJ_G0031822) #15 Nlgn3 (MGP_PahariEiJ_G0031823) #16 Gjb1 (MGP_PahariEiJ_G0031824) #17 Zmym3 (MGP_PahariEiJ_G0031825) #18 Nono (MGP_PahariEiJ_G0031826) ##19 Itgb1bp2 (MGP_PahariEiJ_G0031827) #20 MGP_PahariEiJ_G0031828 #21 Ogt (MGP_PahariEiJ_G0031829) #22 Cxcr3 (MGP_PahariEiJ_G0031830) #23 MGP_PahariEiJ_G0031831 Nhsl2 (MGP_PahariEiJ_G0031832) #25 Rtl5 (MGP_PahariEiJ_G0031833) #24 Pin4 (MGP_PahariEiJ_G0031834) #26 Ercc6l (MGP_PahariEiJ_G0031835) #27 Rps4x (MGP_PahariEiJ_G0031836) #28 Cited1 (MGP_PahariEiJ_G0031837) #29 Hdac8 (MGP_PahariEiJ_G0031838) #30 Phka1 (MGP_PahariEiJ_G0031839) #31 MGP_PahariEiJ_G0031840 MGP_PahariEiJ_G0031841 MGP_PahariEiJ_G0031842 Dmrtc1a (MGP_PahariEiJ_G0031843) Nap1l2 (MGP_PahariEiJ_G0031844) Mus_A ANCESTRAL SPECIES 15 ENSGT00940000159565 #9 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979.c.b #14 ENSGT00510000048979.c.a #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442.sc.b ##19 ENSGT00940000159429 #20 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252.c.a.a ENSGT00390000015252.d ENSGT00950000182963.b.b #25 ENSGT00940000163191 #24 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000168699 ENSGT00410000029400 ENSGT00940000163063 ENSGT00520000059967 Ryukyu mouse MODERN SPECIES 19 Dlg3 (MGP_CAROLIEiJ_G0033276) #9 Tex11 (MGP_CAROLIEiJ_G0033277) #10 Slc7a3 (MGP_CAROLIEiJ_G0033278) Snx12 (MGP_CAROLIEiJ_G0033279) #11 Foxo4 (MGP_CAROLIEiJ_G0033280) #12 Gm614 (MGP_CAROLIEiJ_G0033281) #13 MGP_CAROLIEiJ_G0033282 #14 Il2rg (MGP_CAROLIEiJ_G0033283) #14 Med12 (MGP_CAROLIEiJ_G0033284) #15 Nlgn3 (MGP_CAROLIEiJ_G0033285) #16 Gjb1 (MGP_CAROLIEiJ_G0033286) #17 Zmym3 (MGP_CAROLIEiJ_G0033287) #18 MGP_CAROLIEiJ_G0033288 ##19 Itgb1bp2 (MGP_CAROLIEiJ_G0033289) #20 Taf1 (MGP_CAROLIEiJ_G0033290) #21 Ogt (MGP_CAROLIEiJ_G0033291) #22 Cxcr3 (MGP_CAROLIEiJ_G0033292) #23 MGP_CAROLIEiJ_G0033293 Nhsl2 (MGP_CAROLIEiJ_G0033294) #25 Rtl5 (MGP_CAROLIEiJ_G0033295) #24 MGP_CAROLIEiJ_G0033296 #26 Ercc6l (MGP_CAROLIEiJ_G0033297) #27 Rps4x (MGP_CAROLIEiJ_G0033298) #28 Cited1 (MGP_CAROLIEiJ_G0033299) #29 Hdac8 (MGP_CAROLIEiJ_G0033300) #30 Phka1 (MGP_CAROLIEiJ_G0033301) #31 MGP_CAROLIEiJ_G0033302 MGP_CAROLIEiJ_G0033303 Dmrtc1a (MGP_CAROLIEiJ_G0033304) MGP_CAROLIEiJ_G0033305 Nap1l2 (MGP_CAROLIEiJ_G0033306) Mus_B ANCESTRAL SPECIES 14 ENSGT00940000159565 #9 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979.c.b #14 ENSGT00510000048979.c.a #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442.sc.b ##19 ENSGT00940000159429 #20 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252.c.a.b ENSGT00390000015252.c.a.a ENSGT00390000015252.d ENSGT00950000182963.b.b #25 ENSGT00940000163191 #24 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000168699 ENSGT00410000029400 ENSGT00940000163063 Mouse MODERN SPECIES 37 Gdpd2 (ENSMUSG00000019359) #8 Dlg3 (ENSMUSG00000000881) #9 Tex11 (ENSMUSG00000009670) #10 Slc7a3 (ENSMUSG00000031297) Snx12 (ENSMUSG00000046032) #11 Foxo4 (ENSMUSG00000042903) #12 Gm614 (ENSMUSG00000090141) #13 Il2rg (ENSMUSG00000031304) #14 Med12 (ENSMUSG00000079487) #15 Nlgn3 (ENSMUSG00000031302) #16 Gjb1 (ENSMUSG00000047797) #17 Zmym3 (ENSMUSG00000031310) #18 Nono (ENSMUSG00000031311) ##19 Itgb1bp2 (ENSMUSG00000031312) #20 Taf1 (ENSMUSG00000031314) #21 Ogt (ENSMUSG00000034160) #22 Cxcr3 (ENSMUSG00000050232) #23 Gm4779 (ENSMUSG00000045010) 8030474K03Rik (ENSMUSG00000046774) Gm3858 (ENSMUSG00000118638) Nhsl2 (ENSMUSG00000079481) #25 Rtl5 (ENSMUSG00000049191) #24 Pin4 (ENSMUSG00000079480) #26 Ercc6l (ENSMUSG00000051220) #27 Rps4x (ENSMUSG00000031320) #28 Cited1 (ENSMUSG00000051159) #29 Hdac8 (ENSMUSG00000067567) #30 Phka1 (ENSMUSG00000034055) #31 Gm3880 (ENSMUSG00000081443) Gm9112 (ENSMUSG00000079479) Dmrtc1b (ENSMUSG00000073027) Mus_C ANCESTRAL SPECIES 22 ENSGT00940000159565 #9 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979.c.b #14 ENSGT00510000048979.c.a #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442.sc.b ##19 ENSGT00940000159429 #20 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252.c.a.a ENSGT00390000015252.d ENSGT00950000182963.b.b #25 ENSGT00940000163191 #24 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.b.b ##28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00520000059967 ENSGT00940000156489.m ENSGT00410000029400 ENSGT00940000163372 spretus MODERN SPECIES 19 Gdpd2 (MGP_SPRETEiJ_G0034439) #8 Dlg3 (MGP_SPRETEiJ_G0034440) #9 Tex11 (MGP_SPRETEiJ_G0034441) #10 Slc7a3 (MGP_SPRETEiJ_G0034442) Snx12 (MGP_SPRETEiJ_G0034443) #11 Foxo4 (MGP_SPRETEiJ_G0034444) #12 Gm614 (MGP_SPRETEiJ_G0034445) #13 MGP_SPRETEiJ_G0034446 #14 Il2rg (MGP_SPRETEiJ_G0034447) #14 Med12 (MGP_SPRETEiJ_G0034448) #15 Nlgn3 (MGP_SPRETEiJ_G0034449) #16 Gjb1 (MGP_SPRETEiJ_G0034450) #17 Zmym3 (MGP_SPRETEiJ_G0034451) #18 Itgb1bp2 (MGP_SPRETEiJ_G0034453) #20 Taf1 (MGP_SPRETEiJ_G0034454) #21 Ogt (MGP_SPRETEiJ_G0034455) #22 Cxcr3 (MGP_SPRETEiJ_G0034456) #23 8030474K03Rik (MGP_SPRETEiJ_G0034457) Nhsl2 (MGP_SPRETEiJ_G0034458) #25 Rtl5 (MGP_SPRETEiJ_G0034459) #24 Pin4 (MGP_SPRETEiJ_G0034460) #26 Ercc6l (MGP_SPRETEiJ_G0034461) #27 MGP_SPRETEiJ_G0034462 ##28 Cited1 (MGP_SPRETEiJ_G0034463) #29 Hdac8 (MGP_SPRETEiJ_G0034464) #30 Phka1 (MGP_SPRETEiJ_G0034465) #31 MGP_SPRETEiJ_G0034466 MGP_SPRETEiJ_G0034467 Dmrtc1a (MGP_SPRETEiJ_G0034468) MGP_SPRETEiJ_G0034469 Nap1l2 (MGP_SPRETEiJ_G0034470) Steppe mouse DUPLICATION Steppe mouse MODERN SPECIES 889 ENSMSIG00000007178 #22 Steppe mouse MODERN SPECIES 2075 Ogt (ENSMSIG00000019243) #22 ENSMSIG00000019278 Cxcr3 (ENSMSIG00000019298) #23 Upper Galilee mountains blind mole rat MODERN SPECIES 1742 ENSNGAG00000018164 Slc7a3 (ENSNGAG00000016276) Snx12 (ENSNGAG00000011415) #11 ENSNGAG00000010512 #12 ENSNGAG00000015548 #12 Gm614 (ENSNGAG00000019851) #13 Il2rg (ENSNGAG00000014836) #14 Med12 (ENSNGAG00000014627) #15 Nlgn3 (ENSNGAG00000011722) #16 Gjb1 (ENSNGAG00000008737) #17 Zmym3 (ENSNGAG00000016287) #18 Nono (ENSNGAG00000010857) ##19 Itgb1bp2 (ENSNGAG00000011479) #20 Taf1 (ENSNGAG00000019411) #21 ENSNGAG00000013716 Ogt (ENSNGAG00000017957) #22 Cxcr3 (ENSNGAG00000012996) #23 Rtl5 (ENSNGAG00000014752) #24 Nhsl2 (ENSNGAG00000006702) #25 ENSNGAG00000000797 #26 Ercc6l (ENSNGAG00000021063) #27 Rps4x (ENSNGAG00000011593) #28 Cited1 (ENSNGAG00000010654) #29 Hdac8 (ENSNGAG00000000558) #30 Phka1 (ENSNGAG00000018710) #31 Dmrtc1b (ENSNGAG00000017712) Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 80 Tex11 (ENSJJAG00000018454) #10 Slc7a3 (ENSJJAG00000019367) ENSJJAG00000022270 Snx12 (ENSJJAG00000018084) #11 Foxo4 (ENSJJAG00000013280) #12 Gm614 (ENSJJAG00000019595) #13 Il2rg (ENSJJAG00000013180) #14 Med12 (ENSJJAG00000011766) #15 Nlgn3 (ENSJJAG00000022749) #16 Gjb1 (ENSJJAG00000015275) #17 Zmym3 (ENSJJAG00000017423) #18 ENSJJAG00000017151 ##19 Itgb1bp2 (ENSJJAG00000022114) #20 Taf1 (ENSJJAG00000016231) #21 ENSJJAG00000016438 #22 ENSJJAG00000013564 #22 ENSJJAG00000020751 Cxcr3 (ENSJJAG00000024149) #23 ENSJJAG00000008830 ENSJJAG00000023103 Pin4 (ENSJJAG00000022110) #26 Ercc6l (ENSJJAG00000022875) #27 Rps4x (ENSJJAG00000018258) #28 Cited1 (ENSJJAG00000021265) #29 ENSJJAG00000013599 #30 Phka1 (ENSJJAG00000016074) #31 ENSJJAG00000020172 ENSJJAG00000017642 ENSJJAG00000007037 ENSJJAG00000009723 Nap1l2 (ENSJJAG00000005294) Lesser Egyptian jerboa MODERN SPECIES 80 ENSJJAG00000016532 Tex11 (ENSJJAG00000018454) #10 Slc7a3 (ENSJJAG00000019367) ENSJJAG00000022270 Snx12 (ENSJJAG00000018084) #11 Foxo4 (ENSJJAG00000013280) #12 Gm614 (ENSJJAG00000019595) #13 Il2rg (ENSJJAG00000013180) #14 Med12 (ENSJJAG00000011766) #15 Nlgn3 (ENSJJAG00000022749) #16 Gjb1 (ENSJJAG00000015275) #17 Zmym3 (ENSJJAG00000017423) #18 ENSJJAG00000017151 ##19 Itgb1bp2 (ENSJJAG00000022114) #20 Taf1 (ENSJJAG00000016231) #21 ENSJJAG00000016438 #22 ENSJJAG00000013564 #22 ENSJJAG00000020751 Cxcr3 (ENSJJAG00000024149) #23 ENSJJAG00000008830 ENSJJAG00000023103 Pin4 (ENSJJAG00000022110) #26 Ercc6l (ENSJJAG00000022875) #27 Rps4x (ENSJJAG00000018258) #28 Cited1 (ENSJJAG00000021265) #29 ENSJJAG00000013599 #30 Phka1 (ENSJJAG00000016074) #31 ENSJJAG00000020172 ENSJJAG00000017642 ENSJJAG00000007037 ENSJJAG00000009723 Kangaroo rat MODERN SPECIES 461 Kif4 (ENSDORG00000007037) Gdpd2 (ENSDORG00000007039) #8 Dlg3 (ENSDORG00000014090) #9 Slc7a3 (ENSDORG00000015674) Snx12 (ENSDORG00000025420) #11 Foxo4 (ENSDORG00000002179) #12 Gm614 (ENSDORG00000002180) #13 ENSDORG00000028448 #14 Med12 (ENSDORG00000009816) #15 Nlgn3 (ENSDORG00000007300) #16 Gjb1 (ENSDORG00000029488) #17 Zmym3 (ENSDORG00000012711) #18 Nono (ENSDORG00000009294) ##19 Itgb1bp2 (ENSDORG00000009296) #20 Taf1 (ENSDORG00000014574) #21 Ogt (ENSDORG00000001452) #22 Cxcr3 (ENSDORG00000008991) #23 Rodentia_A ANCESTRAL SPECIES 9 ENSGT00940000159565 #9 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442.sc.b ##19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000163063 ENSGT00940000160311 ENSGT00940000163372 ENSGT00920000150764.a ENSGT00940000162554 Sciuridae ANCESTRAL SPECIES 35 ENSGT00940000159565 #9 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442.sc.b ##19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252.a.a ENSGT00390000015252.b ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000163063 ENSGT00940000160311 ENSGT00940000163372 ENSGT00920000150764.a Marmotini ANCESTRAL SPECIES 66 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442.sc.b ##19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00950000183030.m.a.a.b.b.a.b.b.a.a.a ENSGT00390000018613.b.t.a ENSGT00940000155085.b #22 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252.a.a ENSGT00390000015252.a.b ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000163063 Alpin marmot DUPLICATION Alpin marmot MODERN SPECIES 74 GDPD2 (ENSMMMG00000022047) #8 ENSMMMG00000022037 #9 SLC7A3 (ENSMMMG00000022021) FOXO4 (ENSMMMG00000022014) #12 CXorf65 (ENSMMMG00000022011) #13 IL2RG (ENSMMMG00000022006) #14 MED12 (ENSMMMG00000021946) #15 NLGN3 (ENSMMMG00000021942) #16 GJB1 (ENSMMMG00000021941) #17 ZMYM3 (ENSMMMG00000021815) #18 ITGB1BP2 (ENSMMMG00000021791) #20 ENSMMMG00000021790 ENSMMMG00000021716 #21 ENSMMMG00000021704 ENSMMMG00000021699 ENSMMMG00000021687 #22 CXCR3 (ENSMMMG00000021685) #23 ENSMMMG00000021680 ENSMMMG00000021674 ENSMMMG00000021670 RTL5 (ENSMMMG00000021665) #24 NHSL2 (ENSMMMG00000021658) #25 PIN4 (ENSMMMG00000021657) #26 ERCC6L (ENSMMMG00000021653) #27 ENSMMMG00000021648 #28 CITED1 (ENSMMMG00000021638) #29 HDAC8 (ENSMMMG00000021613) #30 PHKA1 (ENSMMMG00000021479) #31 ENSMMMG00000021472 ENSMMMG00000021453 Alpin marmot MODERN SPECIES 382 ENSMMMG00000010073 #22 Marmotini_b ANCESTRAL SPECIES 98 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442.sc.b ##19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00950000183030.m.a.a.b.b.a.b.b.a.a.a ENSGT00390000018613.b.t.a ENSGT00940000155085.b #22 ENSGT01050000244848.B.a.b #23 Arctic ground squirrel MODERN SPECIES 546 ENSUPAG00010005983 SLC7A3 (ENSUPAG00010005959) SNX12 (ENSUPAG00010005944) #11 FOXO4 (ENSUPAG00010005942) #12 CXorf65 (ENSUPAG00010005934) #13 IL2RG (ENSUPAG00010005932) #14 MED12 (ENSUPAG00010005824) #15 NLGN3 (ENSUPAG00010005804) #16 GJB1 (ENSUPAG00010005797) #17 ZMYM3 (ENSUPAG00010005753) #18 NONO (ENSUPAG00010005675) ##19 ITGB1BP2 (ENSUPAG00010005653) #20 ENSUPAG00010005634 ENSUPAG00010005288 #21 ENSUPAG00010005279 OGT (ENSUPAG00010005205) #22 CXCR3 (ENSUPAG00010005200) #23 Squirrel MODERN SPECIES 362 TEX11 (ENSSTOG00000009656) #10 SLC7A3 (ENSSTOG00000014255) SNX12 (ENSSTOG00000028586) #11 FOXO4 (ENSSTOG00000014587) #12 CXorf65 (ENSSTOG00000031360) #13 IL2RG (ENSSTOG00000031446) #14 MED12 (ENSSTOG00000015847) #15 NLGN3 (ENSSTOG00000015853) #16 GJB1 (ENSSTOG00000023581) #17 ZMYM3 (ENSSTOG00000015858) #18 NONO (ENSSTOG00000015869) ##19 ITGB1BP2 (ENSSTOG00000015874) #20 ENSSTOG00000015879 #21 ENSSTOG00000024910 ENSSTOG00000032111 OGT (ENSSTOG00000012021) #22 CXCR3 (ENSSTOG00000008726) #23 Eurasian red squirrel MODERN SPECIES 156 TEX11 (ENSSVLG00005015907) #10 SLC7A3 (ENSSVLG00005015759) SNX12 (ENSSVLG00005015734) #11 FOXO4 (ENSSVLG00005015644) #12 CXorf65 (ENSSVLG00005015576) #13 IL2RG (ENSSVLG00005015413) #14 MED12 (ENSSVLG00005014181) #15 NLGN3 (ENSSVLG00005013911) #16 GJB1 (ENSSVLG00005013631) #17 ZMYM3 (ENSSVLG00005019858) #18 NONO (ENSSVLG00005019645) ##19 ITGB1BP2 (ENSSVLG00005019473) #20 ENSSVLG00005019328 ENSSVLG00005018492 #21 ENSSVLG00005018371 OGT (ENSSVLG00005018140) #22 CXCR3 (ENSSVLG00005018095) #23 ENSSVLG00005018019 SERP1 (ENSSVLG00005017996) ENSSVLG00005017896 ENSSVLG00005017662 ENSSVLG00005017338 ENSSVLG00005017271 ENSSVLG00005017206 ENSSVLG00005016970 RTL5 (ENSSVLG00005016947) #24 NHSL2 (ENSSVLG00005016754) #25 ERCC6L (ENSSVLG00005016734) #27 PIN4 (ENSSVLG00005016533) #26 ENSSVLG00005016444 #28 CITED1 (ENSSVLG00005016381) #29 Hystricomorpha ANCESTRAL SPECIES 11 ENSGT00940000159625 #8 ENSGT00940000159565 #9 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442.sc.b ##19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT01050000244848.B.a.b #23 ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837.`b #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00390000005569.x.a.b.b.a.a ##28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000163063 ENSGT00940000160311 ENSGT00390000003601.a ENSGT00940000159450 ENSGT00940000155753 Hystricomorpha_a ANCESTRAL SPECIES 51 ENSGT00940000158195 ENSGT00940000159625 #8 ENSGT00940000159565 #9 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442.sc.b ##19 ENSGT00940000159429 #20 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT01050000244848.B.a.b #23 ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837.`b #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00990000205127 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000160311 ENSGT00390000003601.a ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00940000156281 Hystricomorpha_b ANCESTRAL SPECIES 74 ENSGT00940000158195 ENSGT00940000159625 #8 ENSGT00940000159565 #9 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442.sc.b ##19 ENSGT00940000159429 #20 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT01050000244848.B.a.b #23 ENSGT00950000182963.b.b #25 ENSGT00940000163191 #24 ENSGT00510000047029 #26 ENSGT00940000156837.`b #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00990000205127 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 Long-tailed chinchilla MODERN SPECIES 182 GDPD2 (ENSCLAG00000010906) #8 DLG3 (ENSCLAG00000015561) #9 ENSCLAG00000009581 SLC7A3 (ENSCLAG00000010508) SNX12 (ENSCLAG00000004505) #11 FOXO4 (ENSCLAG00000005543) #12 CXorf65 (ENSCLAG00000005706) #13 IL2RG (ENSCLAG00000003047) #14 MED12 (ENSCLAG00000003799) #15 NLGN3 (ENSCLAG00000006482) #16 GJB1 (ENSCLAG00000004895) #17 ZMYM3 (ENSCLAG00000003585) #18 NONO (ENSCLAG00000003642) ##19 ITGB1BP2 (ENSCLAG00000003431) #20 ENSCLAG00000004940 #21 OGT (ENSCLAG00000006474) #22 ENSCLAG00000009475 CXCR3 (ENSCLAG00000010111) #23 NHSL2 (ENSCLAG00000011242) #25 RTL5 (ENSCLAG00000014510) #24 PIN4 (ENSCLAG00000014880) #26 ENSCLAG00000015218 #27 ENSCLAG00000015266 #28 ENSCLAG00000015363 HDAC8 (ENSCLAG00000015755) #30 PHKA1 (ENSCLAG00000013584) #31 Degu MODERN SPECIES 321 SLC7A3 (ENSODEG00000003945) ENSODEG00000003876 SNX12 (ENSODEG00000003826) #11 FOXO4 (ENSODEG00000003760) #12 IL2RG (ENSODEG00000003714) #14 MED12 (ENSODEG00000003271) #15 NLGN3 (ENSODEG00000003089) #16 GJB1 (ENSODEG00000003069) #17 ZMYM3 (ENSODEG00000003059) #18 ENSODEG00000018894 ENSODEG00000002994 ##19 ITGB1BP2 (ENSODEG00000002957) #20 ENSODEG00000002771 #21 OGT (ENSODEG00000002656) #22 CXCR3 (ENSODEG00000002401) #23 RTL5 (ENSODEG00000002380) #24 NHSL2 (ENSODEG00000002360) #25 ENSODEG00000002336 #26 ERCC6L (ENSODEG00000002328) #27 RPS4X (ENSODEG00000002268) ##28 ENSODEG00000002252 ENSODEG00000002215 ENSODEG00000002191 HDAC8 (ENSODEG00000002146) #30 ENSODEG00000002103 PHKA1 (ENSODEG00000002058) #31 Guinea pig MODERN SPECIES 26 KIF4A (ENSCPOG00000000211) GDPD2 (ENSCPOG00000035846) #8 DLG3 (ENSCPOG00000000746) #9 SLC7A3 (ENSCPOG00000005002) SNX12 (ENSCPOG00000011841) #11 FOXO4 (ENSCPOG00000004771) #12 CXorf65 (ENSCPOG00000004768) #13 IL2RG (ENSCPOG00000031320) #14 MED12 (ENSCPOG00000000903) #15 NLGN3 (ENSCPOG00000006193) #16 ZMYM3 (ENSCPOG00000010256) #18 ENSCPOG00000010263 ##19 ITGB1BP2 (ENSCPOG00000038156) #20 ENSCPOG00000039595 ENSCPOG00000035003 #21 OGT (ENSCPOG00000014682) #22 CXCR3 (ENSCPOG00000008446) #23 RTL5 (ENSCPOG00000021990) #24 NHSL2 (ENSCPOG00000005172) #25 PIN4 (ENSCPOG00000031758) #26 ERCC6L (ENSCPOG00000011407) #27 ENSCPOG00000006337 #28 ENSCPOG00000003816 HDAC8 (ENSCPOG00000005671) #30 PHKA1 (ENSCPOG00000005675) #31 ENSCPOG00000009525 CHIC1 (ENSCPOG00000035632) SLC16A2 (ENSCPOG00000000465) RLIM (ENSCPOG00000031438) NEXMIF (ENSCPOG00000014831) ABCB7 (ENSCPOG00000010708) Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 31 ENSHGLG00000045854 #11 FOXO4 (ENSHGLG00000013305) #12 ENSHGLG00000004894 #13 ENSHGLG00000010744 #14 MED12 (ENSHGLG00000005421) #15 NLGN3 (ENSHGLG00000009982) #16 GJB1 (ENSHGLG00000004743) #17 ZMYM3 (ENSHGLG00000014526) #18 NONO (ENSHGLG00000005550) ##19 ITGB1BP2 (ENSHGLG00000015433) #20 ENSHGLG00000050039 ENSHGLG00000050796 ENSHGLG00000014818 #21 ENSHGLG00000031947 ENSHGLG00000049149 ENSHGLG00000040608 #22 ENSHGLG00000007209 #22 ENSHGLG00000042327 ENSHGLG00000050614 ENSHGLG00000008499 #23 ENSHGLG00000034062 ENSHGLG00000006799 ENSHGLG00000037492 ENSHGLG00000050364 ENSHGLG00000047657 RTL5 (ENSHGLG00000043760) #24 NHSL2 (ENSHGLG00000004791) #25 ENSHGLG00000033358 PIN4 (ENSHGLG00000043461) #26 ERCC6L (ENSHGLG00000016594) #27 ENSHGLG00000009172 ##28 Naked mole-rat female MODERN SPECIES 15 ROGDI (ENSHGLG00000018315) GLYR1 (ENSHGLG00000019553) UBN1 (ENSHGLG00000013188) ENSHGLG00000048344 PPL (ENSHGLG00000017647) SEC14L5 (ENSHGLG00000007409) NAGPA (ENSHGLG00000009058) C16orf89 (ENSHGLG00000010662) ENSHGLG00000016910 ENSHGLG00000014051 ENSHGLG00000020958 ENSHGLG00000044681 ENSHGLG00000041009 ENSHGLG00000015461 ENSHGLG00000016944 ENSHGLG00000013307 #22 ENSHGLG00000037965 ENSHGLG00000042436 ENSHGLG00000020155 ENSHGLG00000032356 ENSHGLG00000017658 ABAT (ENSHGLG00000006051) TMEM186 (ENSHGLG00000006781) PMM2 (ENSHGLG00000042320) ENSHGLG00000036166 USP7 (ENSHGLG00000018774) HAPSTR1 (ENSHGLG00000039743) ENSHGLG00000043848 ENSHGLG00000043325 GRIN2A (ENSHGLG00000018458) ENSHGLG00000034045 Naked mole-rat female MODERN SPECIES 31 FOXO4 (ENSHGLG00000013305) #12 ENSHGLG00000004894 #13 ENSHGLG00000010744 #14 MED12 (ENSHGLG00000005421) #15 NLGN3 (ENSHGLG00000009982) #16 GJB1 (ENSHGLG00000004743) #17 ZMYM3 (ENSHGLG00000014526) #18 NONO (ENSHGLG00000005550) ##19 ITGB1BP2 (ENSHGLG00000015433) #20 ENSHGLG00000050039 ENSHGLG00000050796 ENSHGLG00000014818 #21 ENSHGLG00000031947 ENSHGLG00000049149 ENSHGLG00000040608 #22 ENSHGLG00000007209 #22 ENSHGLG00000042327 ENSHGLG00000050614 ENSHGLG00000008499 #23 ENSHGLG00000034062 ENSHGLG00000006799 ENSHGLG00000037492 ENSHGLG00000050364 ENSHGLG00000047657 RTL5 (ENSHGLG00000043760) #24 NHSL2 (ENSHGLG00000004791) #25 ENSHGLG00000033358 PIN4 (ENSHGLG00000043461) #26 ERCC6L (ENSHGLG00000016594) #27 ENSHGLG00000009172 ##28 CITED1 (ENSHGLG00000013001) #29 Lagomorpha ANCESTRAL SPECIES 40 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442.sc.a.b #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252.f ENSGT00390000015252.e.a ENSGT00950000182963.b.b #25 ENSGT00940000163191 #24 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.b.b ##28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000163063 ENSGT00940000160311 ENSGT00940000163372 ENSGT00920000150764.a Rabbit MODERN SPECIES 1401 ENSOCUG00000030602 SLC7A3 (ENSOCUG00000010551) SNX12 (ENSOCUG00000014919) #11 FOXO4 (ENSOCUG00000027545) #12 CXorf65 (ENSOCUG00000013046) #13 ENSOCUG00000025850 #14 MED12 (ENSOCUG00000006797) #15 NLGN3 (ENSOCUG00000006811) #16 ENSOCUG00000032710 GJB1 (ENSOCUG00000004588) #17 ZMYM3 (ENSOCUG00000012396) #18 ENSOCUG00000021848 #19 ITGB1BP2 (ENSOCUG00000016643) #20 ENSOCUG00000022027 ENSOCUG00000015656 #21 OGT (ENSOCUG00000016965) #22 CXCR3 (ENSOCUG00000015578) #23 ENSOCUG00000030259 ENSOCUG00000028210 ENSOCUG00000003502 ENSOCUG00000036122 ENSOCUG00000029215 ENSOCUG00000029373 ENSOCUG00000021556 ENSOCUG00000022701 NHSL2 (ENSOCUG00000014345) #25 RTL5 (ENSOCUG00000008707) #24 PIN4 (ENSOCUG00000008715) #26 ERCC6L (ENSOCUG00000008724) #27 ENSOCUG00000015749 ##28 ENSOCUG00000013315 #29 Pika MODERN SPECIES 2021 ENSOPRG00000007774 #22 Tree shrew MODERN SPECIES 2338 ENSTBEG00000003610 OGT (ENSTBEG00000003622) #22 Primates ANCESTRAL SPECIES 19 ENSGT00940000159565 #9 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029.z #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00410000029400 ENSGT00940000163063 ENSGT00940000160311 ENSGT00940000163372 Haplorrhini ANCESTRAL SPECIES 18 ENSGT00940000159625 #8 ENSGT00940000159565 #9 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029.z #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00410000029400 ENSGT00940000163063 ENSGT00940000160311 ENSGT00940000163372 Simiiformes ANCESTRAL SPECIES 9 ENSGT00940000159565 #9 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00510000047030.xb.a ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252.h ENSGT00390000015252.g ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029.z.d.a #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00410000029400 ENSGT00940000165171 ENSGT00940000163063 Catarrhini ANCESTRAL SPECIES 12 ENSGT00510000047030.xb.a.d ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000155242.m #21 ENSGT00940000154606.`c.b ENSGT00910000147593 ENSGT00950000183584 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252.g.a.b ENSGT00390000015252.h ENSGT00390000015252.g.a.a ENSGT00950000182963.b.b #25 ENSGT00940000163191 #24 ENSGT00510000047029.z.e #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00410000029400 ENSGT00940000165171 Hominoidea ANCESTRAL SPECIES 16 ENSGT00510000047030.xb.a.d ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000155242.m #21 ENSGT00940000154606.`c.b ENSGT00910000147593 ENSGT00950000183584 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252.g.a.b ENSGT00390000015252.h ENSGT00390000015252.g.b ENSGT00390000015252.g.a.a ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029.z.d.a #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00410000029400 Hominidae ANCESTRAL SPECIES 8 ENSGT00510000047030.xb.a.d ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000155242.m #21 ENSGT00940000154606.`c.b ENSGT00910000147593 ENSGT00950000183584 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252.g.a.b ENSGT00390000015252.h ENSGT00390000015252.g.b ENSGT00390000015252.g.a.a ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029.z.d.a #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00410000029400.b Homo/Pan/Gorilla group ANCESTRAL SPECIES 9 ENSGT00510000047030.xb.a.d ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000155242.m #21 ENSGT00940000154606.`c.b ENSGT00910000147593 ENSGT00950000183584 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252.g.a.b ENSGT00390000015252.h.a ENSGT00390000015252.g.b ENSGT00390000015252.g.a.a ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029.z.d.a #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00410000029400.b Homo/Pan group ANCESTRAL SPECIES 9 ENSGT00510000047030.xb.a.d ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000155242.m #21 ENSGT00940000154606.`c.b ENSGT00910000147593 ENSGT00950000183584 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252.g.a.b ENSGT00390000015252.h.a ENSGT00390000015252.g.a.a ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029.z.d.a #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00410000029400.b ENSGT00410000029400.a Pan ANCESTRAL SPECIES 6 ENSGT00510000047030.xb.a.d ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000155242.m #21 ENSGT00940000154606.`c.b ENSGT00910000147593 ENSGT00950000183584 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252.g.a.b ENSGT00390000015252.h.a ENSGT00950000182963.b.b #25 ENSGT00940000163191 #24 ENSGT00510000047029.z.d.a #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000160311 ENSGT00390000011698.c.a.c.a.j.a.b ENSGT00940000162554 Chimpanzee MODERN SPECIES 972 ENSPTRG00000043495 SNX12 (ENSPTRG00000022003) #11 FOXO4 (ENSPTRG00000022004) #12 IL2RG (ENSPTRG00000022005) #14 MED12 (ENSPTRG00000022006) #15 NLGN3 (ENSPTRG00000022007) #16 GJB1 (ENSPTRG00000022008) #17 ZMYM3 (ENSPTRG00000022009) #18 NONO (ENSPTRG00000022010) #19 ITGB1BP2 (ENSPTRG00000022012) #20 ENSPTRG00000045111 TAF1 (ENSPTRG00000044784) #21 ENSPTRG00000047273 ENSPTRG00000044195 ENSPTRG00000045772 OGT (ENSPTRG00000049301) #22 GCNA (ENSPTRG00000022017) CXCR3 (ENSPTRG00000022018) #23 ENSPTRG00000047794 ENSPTRG00000046702 ENSPTRG00000044432 ENSPTRG00000050221 NHSL2 (ENSPTRG00000028255) #25 RTL5 (ENSPTRG00000039375) #24 PIN4 (ENSPTRG00000049495) #26 ERCC6L (ENSPTRG00000022023) #27 RPS4X (ENSPTRG00000022025) #28 CITED1 (ENSPTRG00000022026) #29 HDAC8 (ENSPTRG00000051531) #30 PHKA1 (ENSPTRG00000022029) #31 ENSPTRG00000045935 Bonobo MODERN SPECIES 369 SNX12 (ENSPPAG00000042824) #11 FOXO4 (ENSPPAG00000031379) #12 CXorf65 (ENSPPAG00000043258) #13 IL2RG (ENSPPAG00000040164) #14 MED12 (ENSPPAG00000032699) #15 NLGN3 (ENSPPAG00000028928) #16 GJB1 (ENSPPAG00000000516) #17 ZMYM3 (ENSPPAG00000029708) #18 NONO (ENSPPAG00000032487) #19 ITGB1BP2 (ENSPPAG00000038113) #20 ENSPPAG00000041848 TAF1 (ENSPPAG00000009193) #21 ENSPPAG00000039421 ENSPPAG00000017119 ENSPPAG00000027775 OGT (ENSPPAG00000030832) #22 ENSPPAG00000041492 CXCR3 (ENSPPAG00000042300) #23 ENSPPAG00000029254 ENSPPAG00000030502 NHSL2 (ENSPPAG00000037776) #25 ENSPPAG00000026409 #24 PIN4 (ENSPPAG00000035593) #26 ERCC6L (ENSPPAG00000031861) #27 ENSPPAG00000039737 #28 CITED1 (ENSPPAG00000037425) #29 HDAC8 (ENSPPAG00000023056) #30 PHKA1 (ENSPPAG00000042021) #31 ENSPPAG00000042207 ENSPPAG00000012920 ENSPPAG00000035410 Human MODERN SPECIES 1827 GDPD2 (ENSG00000130055) #8 DLG3 (ENSG00000082458) #9 TEX11 (ENSG00000120498) #10 SLC7A3 (ENSG00000165349) SNX12 (ENSG00000147164) #11 FOXO4 (ENSG00000184481) #12 CXorf65 (ENSG00000204165) #13 IL2RG (ENSG00000147168) #14 MED12 (ENSG00000184634) #15 NLGN3 (ENSG00000196338) #16 GJB1 (ENSG00000169562) #17 ZMYM3 (ENSG00000147130) #18 NONO (ENSG00000147140) #19 ITGB1BP2 (ENSG00000147166) #20 TAF1 (ENSG00000147133) #21 OGT (ENSG00000147162) #22 GCNA (ENSG00000147174) CXCR3 (ENSG00000186810) #23 ENSG00000283599 CXorf49 (ENSG00000215115) CXorf49B (ENSG00000215113) NHSL2 (ENSG00000204131) #25 RTL5 (ENSG00000242732) #24 PIN4 (ENSG00000102309) #26 ERCC6L (ENSG00000186871) #27 RPS4X (ENSG00000198034) ##28 CITED1 (ENSG00000125931) #29 ENSG00000285547 HDAC8 (ENSG00000147099) #30 PHKA1 (ENSG00000067177) #31 DMRTC1B (ENSG00000184911) Gorilla MODERN SPECIES 523 SNX12 (ENSGGOG00000014926) #11 FOXO4 (ENSGGOG00000001812) #12 CXorf65 (ENSGGOG00000014679) #13 IL2RG (ENSGGOG00000014674) #14 MED12 (ENSGGOG00000009289) #15 NLGN3 (ENSGGOG00000013305) #16 GJB1 (ENSGGOG00000010772) #17 ZMYM3 (ENSGGOG00000006825) #18 ENSGGOG00000006194 #19 ENSGGOG00000037538 #19 ENSGGOG00000043362 TAF1 (ENSGGOG00000015672) #21 ENSGGOG00000039675 ENSGGOG00000039493 ENSGGOG00000036906 OGT (ENSGGOG00000014867) #22 ENSGGOG00000014876 CXCR3 (ENSGGOG00000014881) #23 ENSGGOG00000039521 ENSGGOG00000026973 ENSGGOG00000039791 NHSL2 (ENSGGOG00000012481) #25 RTL5 (ENSGGOG00000037617) #24 PIN4 (ENSGGOG00000016008) #26 ERCC6L (ENSGGOG00000022367) #27 ENSGGOG00000023079 #28 CITED1 (ENSGGOG00000000290) #29 HDAC8 (ENSGGOG00000011587) #30 PHKA1 (ENSGGOG00000006781) #31 ENSGGOG00000024429 ENSGGOG00000039205 Orangutan MODERN SPECIES 242 GDPD2 (ENSPPYG00000020439) #8 DLG3 (ENSPPYG00000020440) #9 TEX11 (ENSPPYG00000020441) #10 SLC7A3 (ENSPPYG00000020442) SNX12 (ENSPPYG00000020443) #11 FOXO4 (ENSPPYG00000020444) #12 CXorf65 (ENSPPYG00000020445) #13 IL2RG (ENSPPYG00000020446) #14 MED12 (ENSPPYG00000020447) #15 NLGN3 (ENSPPYG00000020448) #16 GJB1 (ENSPPYG00000020449) #17 ZMYM3 (ENSPPYG00000020450) #18 NONO (ENSPPYG00000020451) #19 ITGB1BP2 (ENSPPYG00000020452) #20 TAF1 (ENSPPYG00000020453) #21 OGT (ENSPPYG00000020456) #22 GCNA (ENSPPYG00000020457) CXCR3 (ENSPPYG00000020458) #23 ENSPPYG00000020909 ENSPPYG00000035498 ENSPPYG00000035100 NHSL2 (ENSPPYG00000020459) #25 RTL5 (ENSPPYG00000041447) #24 PIN4 (ENSPPYG00000020460) #26 ERCC6L (ENSPPYG00000020461) #27 RPS4X (ENSPPYG00000020462) ##28 CITED1 (ENSPPYG00000032934) #29 HDAC8 (ENSPPYG00000020464) #30 PHKA1 (ENSPPYG00000020465) #31 ENSPPYG00000030578 ENSPPYG00000020466 Gibbon MODERN SPECIES 449 SLC7A3 (ENSNLEG00000001098) SNX12 (ENSNLEG00000001114) #11 FOXO4 (ENSNLEG00000001131) #12 CXorf65 (ENSNLEG00000029869) #13 IL2RG (ENSNLEG00000001139) #14 MED12 (ENSNLEG00000001176) #15 NLGN3 (ENSNLEG00000001230) #16 ENSNLEG00000034741 #17 ZMYM3 (ENSNLEG00000001252) #18 NONO (ENSNLEG00000001278) #19 ITGB1BP2 (ENSNLEG00000001428) #20 ENSNLEG00000032761 TAF1 (ENSNLEG00000000934) #21 ENSNLEG00000030598 ENSNLEG00000032518 OGT (ENSNLEG00000001038) #22 ENSNLEG00000036058 CXCR3 (ENSNLEG00000001116) #23 ENSNLEG00000029115 ENSNLEG00000001121 NHSL2 (ENSNLEG00000018118) #25 RTL5 (ENSNLEG00000018851) #24 ENSNLEG00000018852 PIN4 (ENSNLEG00000036320) #26 ERCC6L (ENSNLEG00000036284) #27 ENSNLEG00000018121 #28 CITED1 (ENSNLEG00000018122) #29 HDAC8 (ENSNLEG00000018123) #30 PHKA1 (ENSNLEG00000018124) #31 ENSNLEG00000018125 ENSNLEG00000029049 Cercopithecidae ANCESTRAL SPECIES 19 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00910000147480 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000155242.m #21 ENSGT00940000154606.`c.b ENSGT00910000147593 ENSGT00950000183584 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252.g.a.b ENSGT00390000015252.h ENSGT00390000015252.g.a.a ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029.z.e.e.b.b #26 ENSGT00390000006051.a.b.a.a.j.b.a ENSGT00510000047029.z.e.e.a #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 Rhinopithecus ANCESTRAL SPECIES 714 ENSGT00950000183584 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252.h Golden snub-nosed monkey MODERN SPECIES 1289 ENSRROG00000029259 OGT (ENSRROG00000029456) #22 GCNA (ENSRROG00000045007) CXCR3 (ENSRROG00000037761) #23 ENSRROG00000045206 Black snub-nosed monkey MODERN SPECIES 1 OGT (ENSRBIG00000007665) #22 Cercopithecinae ANCESTRAL SPECIES 13 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00910000147480 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000155242.m #21 ENSGT00940000154606.`c.b ENSGT00910000147593 ENSGT00950000183584 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252.g.a.b ENSGT00390000015252.h ENSGT00390000015252.g.a.a ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00390000006051.a.b.a.a.j.b.a ENSGT00510000047029.z.e.e.a #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000163063 Cercopithecinae_a ANCESTRAL SPECIES 11 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00910000147480 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000155242.m #21 ENSGT00940000154606.`c.b ENSGT00910000147593 ENSGT00950000183584 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252.g.a.b ENSGT00390000015252.h ENSGT00390000015252.g.a.a ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00390000006051.a.b.a.a.j.b.a ENSGT00510000047029.z.e.e.a #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00550000074828.a.g.b.l Cercopithecinae_b ANCESTRAL SPECIES 46 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00910000147480 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000155242.m #21 ENSGT00940000154606.`c.b ENSGT00950000183584 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252.g.a.b ENSGT00390000015252.h ENSGT00390000015252.g.a.a ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00390000006051.a.b.a.a.j.b.a ENSGT00510000047029.z.e.e.a #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00410000029400.e Olive baboon MODERN SPECIES 792 ENSPANG00000049739 TEX11 (ENSPANG00000009217) #10 SLC7A3 (ENSPANG00000019289) SNX12 (ENSPANG00000024513) #11 ENSPANG00000045699 FOXO4 (ENSPANG00000026427) #12 IL2RG (ENSPANG00000010096) #14 MED12 (ENSPANG00000002788) #15 NLGN3 (ENSPANG00000015903) #16 GJB1 (ENSPANG00000007805) #17 ITGB1BP2 (ENSPANG00000011696) #20 NONO (ENSPANG00000013979) #19 ZMYM3 (ENSPANG00000008073) #18 ENSPANG00000023326 TAF1 (ENSPANG00000023870) #21 OGT (ENSPANG00000026426) #22 CXCR3 (ENSPANG00000026347) #23 ENSPANG00000008493 GCNA (ENSPANG00000012945) ENSPANG00000030068 RTL5 (ENSPANG00000006959) #24 NHSL2 (ENSPANG00000012054) #25 PIN4 (ENSPANG00000034428) #26 ERCC6L (ENSPANG00000011598) #27 ENSPANG00000023869 #28 ENSPANG00000034776 #29 ENSPANG00000013951 ZCCHC13 (ENSPANG00000017963) ENSPANG00000003961 SLC16A2 (ENSPANG00000014705) RLIM (ENSPANG00000005846) Cercopithecinae_d ANCESTRAL SPECIES 103 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00910000147480 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000155242.m #21 ENSGT00940000154606.`c.b ENSGT00950000183584 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252.g.a.b ENSGT00390000015252.h Drill MODERN SPECIES 1074 SNX12 (ENSMLEG00000027944) #11 FOXO4 (ENSMLEG00000040555) #12 CXorf65 (ENSMLEG00000037424) #13 IL2RG (ENSMLEG00000031090) #14 MED12 (ENSMLEG00000039277) #15 NLGN3 (ENSMLEG00000033009) #16 GJB1 (ENSMLEG00000015923) #17 ENSMLEG00000041094 ZMYM3 (ENSMLEG00000036062) #18 NONO (ENSMLEG00000042452) #19 ITGB1BP2 (ENSMLEG00000030057) #20 ENSMLEG00000034590 TAF1 (ENSMLEG00000034748) #21 ENSMLEG00000034623 ENSMLEG00000040993 OGT (ENSMLEG00000029799) #22 GCNA (ENSMLEG00000044024) CXCR3 (ENSMLEG00000031885) #23 ENSMLEG00000040600 ENSMLEG00000035136 Sooty mangabey MODERN SPECIES 653 DLG3 (ENSCATG00000030345) #9 TEX11 (ENSCATG00000041501) #10 SLC7A3 (ENSCATG00000039492) SNX12 (ENSCATG00000037212) #11 FOXO4 (ENSCATG00000033404) #12 CXorf65 (ENSCATG00000018314) #13 IL2RG (ENSCATG00000032098) #14 MED12 (ENSCATG00000042199) #15 NLGN3 (ENSCATG00000035832) #16 GJB1 (ENSCATG00000022934) #17 ZMYM3 (ENSCATG00000041243) #18 NONO (ENSCATG00000039509) #19 ITGB1BP2 (ENSCATG00000042238) #20 TAF1 (ENSCATG00000039715) #21 ENSCATG00000036274 OGT (ENSCATG00000043544) #22 GCNA (ENSCATG00000035781) CXCR3 (ENSCATG00000029282) #23 ENSCATG00000037121 ENSCATG00000040515 Macaca ANCESTRAL SPECIES 13 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00910000147480 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000155242.m #21 ENSGT00940000154606.`c.b ENSGT00910000147593 ENSGT00950000183584 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252.g.a.b ENSGT00390000015252.h ENSGT00390000015252.g.a.a ENSGT00950000182963.b.b #25 ENSGT00940000163191 #24 ENSGT00510000047029.z.e.e.a #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00390000005569.x.a.b.b.b ##28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00550000074828.a.g.b.l Macaca_a ANCESTRAL SPECIES 11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00910000147480 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT01100000263493.a.b.b.a.a.b.a.a.a.d.a.a.a.a ENSGT00940000155242.m #21 ENSGT00940000154606.`c.b ENSGT00910000147593 ENSGT00950000183584 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252.g.a.b ENSGT00390000015252.h ENSGT00390000015252.g.a.a ENSGT00950000182963.b.b #25 ENSGT00940000163191 #24 ENSGT00510000047029.z.e.e.a #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00550000074828.a.g.b.l ENSGT00940000160311 ENSGT00940000163372 Crab-eating macaque MODERN SPECIES 175 NLGN3 (ENSMFAG00000002421) #16 ENSMFAG00000057282 ENSMFAG00000060662 GJB1 (ENSMFAG00000063942) #17 ENSMFAG00000064000 ZMYM3 (ENSMFAG00000043632) #18 NONO (ENSMFAG00000041557) #19 ITGB1BP2 (ENSMFAG00000037969) #20 ENSMFAG00000058252 TAF1 (ENSMFAG00000001749) #21 ENSMFAG00000047652 ENSMFAG00000060403 ENSMFAG00000031355 ENSMFAG00000054759 ENSMFAG00000036860 OGT (ENSMFAG00000001803) #22 GCNA (ENSMFAG00000046224) CXCR3 (ENSMFAG00000031295) #23 ENSMFAG00000044396 ENSMFAG00000000394 ENSMFAG00000031405 NHSL2 (ENSMFAG00000033144) #25 PIN4 (ENSMFAG00000043832) #26 ERCC6L (ENSMFAG00000045509) #27 ENSMFAG00000038135 ##28 HDAC8 (ENSMFAG00000003160) #30 PHKA1 (ENSMFAG00000038543) #31 ENSMFAG00000007994 ENSMFAG00000039331 ENSMFAG00000051621 ENSMFAG00000034324 Rhesus MODERN SPECIES 327 SLC7A3 (ENSMMUG00000003274) SNX12 (ENSMMUG00000021906) #11 FOXO4 (ENSMMUG00000032429) #12 CXHXorf65 (ENSMMUG00000032428) #13 IL2RG (ENSMMUG00000017795) #14 MED12 (ENSMMUG00000017797) #15 NLGN3 (ENSMMUG00000032427) #16 GJB1 (ENSMMUG00000000669) #17 ZMYM3 (ENSMMUG00000000667) #18 NONO (ENSMMUG00000020481) #19 ITGB1BP2 (ENSMMUG00000020479) #20 ENSMMUG00000054587 TAF1 (ENSMMUG00000005663) #21 ENSMMUG00000048382 ENSMMUG00000056450 OGT (ENSMMUG00000015238) #22 GCNA (ENSMMUG00000011469) CXCR3 (ENSMMUG00000032424) #23 ENSMMUG00000017783 ENSMMUG00000014885 NHSL2 (ENSMMUG00000021924) #25 RTL5 (ENSMMUG00000059483) #24 PIN4 (ENSMMUG00000055786) #26 ERCC6L (ENSMMUG00000012957) #27 RPS4X (ENSMMUG00000003295) #28 CITED1 (ENSMMUG00000003296) #30 PHKA1 (ENSMMUG00000007593) #31 ENSMMUG00000055457 ENSMMUG00000057710 ENSMMUG00000059926 ENSMMUG00000053182 Pig-tailed macaque MODERN SPECIES 540 FOXO4 (ENSMNEG00000043365) #12 CXorf65 (ENSMNEG00000038907) #13 IL2RG (ENSMNEG00000031163) #14 MED12 (ENSMNEG00000041257) #15 NLGN3 (ENSMNEG00000041386) #16 GJB1 (ENSMNEG00000006305) #17 ENSMNEG00000021179 ZMYM3 (ENSMNEG00000043291) #18 NONO (ENSMNEG00000009698) #19 ITGB1BP2 (ENSMNEG00000038061) #20 ENSMNEG00000032137 ENSMNEG00000035750 TAF1 (ENSMNEG00000040166) #21 ENSMNEG00000040115 ENSMNEG00000014772 OGT (ENSMNEG00000041038) #22 GCNA (ENSMNEG00000034989) CXCR3 (ENSMNEG00000003697) #23 ENSMNEG00000036489 ENSMNEG00000045480 ENSMNEG00000045487 Vervet Monkey MODERN SPECIES 203 TEX11 (ENSCSAG00000011589) #10 SLC7A3 (ENSCSAG00000011570) ENSCSAG00000011535 #11 FOXO4 (ENSCSAG00000011533) #12 CXorf65 (ENSCSAG00000011528) #13 IL2RG (ENSCSAG00000011507) #14 MED12 (ENSCSAG00000011441) #15 NLGN3 (ENSCSAG00000011419) #16 GJB1 (ENSCSAG00000000106) #17 ZMYM3 (ENSCSAG00000011407) #18 ENSCSAG00000011368 #19 ENSCSAG00000011364 #19 ITGB1BP2 (ENSCSAG00000011356) #20 TAF1 (ENSCSAG00000011320) #21 ENSCSAG00000011236 OGT (ENSCSAG00000011228) #22 CXCR3 (ENSCSAG00000011214) #23 ENSCSAG00000011211 ENSCSAG00000011207 RTL5 (ENSCSAG00000000104) #24 NHSL2 (ENSCSAG00000011202) #25 ERCC6L (ENSCSAG00000011173) #27 ENSCSAG00000011155 ##28 CITED1 (ENSCSAG00000011106) #29 HDAC8 (ENSCSAG00000011100) #30 PHKA1 (ENSCSAG00000011091) #31 ENSCSAG00000011069 ENSCSAG00000000102 NAP1L2 (ENSCSAG00000000099) CDX4 (ENSCSAG00000011047) CHIC1 (ENSCSAG00000011042) Platyrrhini DUPLICATION Platyrrhini ANCESTRAL SPECIES ENSGT00940000155085.b.a #22 Cebidae ANCESTRAL SPECIES ENSGT00940000155085.b.a #22 Cebidae_a ANCESTRAL SPECIES ENSGT00940000155085.b.a #22 Capuchin MODERN SPECIES 251 MAP9 (ENSCCAG00000032529) NPY2R (ENSCCAG00000017441) ENSCCAG00000022596 #22 ENSCCAG00000027619 ENSCCAG00000005096 LRAT (ENSCCAG00000028075) FGG (ENSCCAG00000020729) ENSCCAG00000033876 FGB (ENSCCAG00000018250) PLRG1 (ENSCCAG00000030259) SFRP2 (ENSCCAG00000027729) RNF175 (ENSCCAG00000032466) TLR2 (ENSCCAG00000035932) TMEM131L (ENSCCAG00000030421) ENSCCAG00000033570 ENSCCAG00000024557 TRIM2 (ENSCCAG00000023128) FHDC1 (ENSCCAG00000003243) Platyrrhini ANCESTRAL SPECIES 33 ENSGT00940000159565 #9 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00510000047030.xb.a ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000155242 #21 ENSGT00940000155085.b.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252.g ENSGT00390000015252.h ENSGT00950000182963.b.b #25 ENSGT00510000047029.z.d.a #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.b.b ##28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00410000029400 ENSGT00940000163063 ENSGT00940000165171 ENSGT00940000162554 Cebidae ANCESTRAL SPECIES 18 ENSGT00940000159565 #9 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00510000047030.xb.a ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000155242 #21 ENSGT00940000155085.b.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252.g ENSGT00390000015252.h ENSGT00950000182963.b.b #25 ENSGT00510000047029.z.d.a #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00390000005569.x.a.b.b.b ##28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00410000029400 ENSGT00940000163063 ENSGT00940000165171 Cebidae_a ANCESTRAL SPECIES 104 ENSGT00390000006492 #10 ENSGT00940000165859 ENSGT00940000154651 ENSGT00510000047030.xb.a ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000155242 #21 ENSGT00940000155085.b.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252.g ENSGT00390000015252.h Bolivian squirrel monkey MODERN SPECIES 216 TEX11 (ENSSBOG00000028689) #10 ENSSBOG00000030655 SLC7A3 (ENSSBOG00000027088) SNX12 (ENSSBOG00000033833) #11 FOXO4 (ENSSBOG00000034791) #12 CXorf65 (ENSSBOG00000025817) #13 IL2RG (ENSSBOG00000035608) #14 MED12 (ENSSBOG00000021936) #15 NLGN3 (ENSSBOG00000021594) #16 GJB1 (ENSSBOG00000009060) #17 ZMYM3 (ENSSBOG00000027451) #18 ENSSBOG00000032772 #19 ITGB1BP2 (ENSSBOG00000018221) #20 ENSSBOG00000022234 ENSSBOG00000028005 #21 OGT (ENSSBOG00000022333) #22 ENSSBOG00000028508 CXCR3 (ENSSBOG00000019568) #23 Capuchin MODERN SPECIES 600 ENSCCAG00000012999 ENSCCAG00000033690 SLC7A3 (ENSCCAG00000028393) ENSCCAG00000002965 SNX12 (ENSCCAG00000030985) #11 FOXO4 (ENSCCAG00000035699) #12 IL2RG (ENSCCAG00000010709) #14 MED12 (ENSCCAG00000033545) #15 NLGN3 (ENSCCAG00000011081) #16 GJB1 (ENSCCAG00000006711) #17 ZMYM3 (ENSCCAG00000022575) #18 ITGB1BP2 (ENSCCAG00000035542) #20 ENSCCAG00000021693 ENSCCAG00000027160 #21 ENSCCAG00000026945 #22 GCNA (ENSCCAG00000025816) CXCR3 (ENSCCAG00000037320) #23 ENSCCAG00000034527 ENSCCAG00000028836 Marmoset MODERN SPECIES 78 TEX11 (ENSCJAG00000008159) #10 SLC7A3 (ENSCJAG00000013431) ENSCJAG00000077337 SNX12 (ENSCJAG00000071069) #11 FOXO4 (ENSCJAG00000013651) #12 CXorf65 (ENSCJAG00000035170) #13 IL2RG (ENSCJAG00000045011) #14 MED12 (ENSCJAG00000013584) #15 NLGN3 (ENSCJAG00000013566) #16 ZMYM3 (ENSCJAG00000013481) #18 NONO (ENSCJAG00000036744) #19 ITGB1BP2 (ENSCJAG00000013429) #20 ENSCJAG00000087001 ENSCJAG00000081676 ENSCJAG00000013390 #21 OGT (ENSCJAG00000013308) #22 ENSCJAG00000031514 CXCR3 (ENSCJAG00000006395) #23 ENSCJAG00000032793 ENSCJAG00000032034 ENSCJAG00000086496 ENSCJAG00000084928 NHSL2 (ENSCJAG00000005012) #25 RTL5 (ENSCJAG00000064303) #24 ENSCJAG00000004992 #26 ENSCJAG00000074350 ERCC6L (ENSCJAG00000022332) #27 RPS4X (ENSCJAG00000004192) ##28 CITED1 (ENSCJAG00000004200) #29 ENSCJAG00000058709 ENSCJAG00000081431 Mas night monkey MODERN SPECIES 990 GDPD2 (ENSANAG00000032100) #8 DLG3 (ENSANAG00000037194) #9 TEX11 (ENSANAG00000033655) #10 SLC7A3 (ENSANAG00000024429) SNX12 (ENSANAG00000032402) #11 FOXO4 (ENSANAG00000032029) #12 CXorf65 (ENSANAG00000034991) #13 IL2RG (ENSANAG00000016055) #14 MED12 (ENSANAG00000035428) #15 NLGN3 (ENSANAG00000021478) #16 GJB1 (ENSANAG00000016402) #17 ZMYM3 (ENSANAG00000024977) #18 NONO (ENSANAG00000033266) #19 ITGB1BP2 (ENSANAG00000032690) #20 ENSANAG00000035962 #21 OGT (ENSANAG00000022524) #22 Tarsier MODERN SPECIES 6708 ENSTSYG00000036306 #19 ITGB1BP2 (ENSTSYG00000007439) #20 ENSTSYG00000004121 #21 OGT (ENSTSYG00000010626) #22 CXCR3 (ENSTSYG00000006399) #23 Strepsirrhini ANCESTRAL SPECIES 37 ENSGT00940000159565 #9 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029.z #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00410000029400 ENSGT00940000163063 ENSGT00940000160311.g.b ENSGT00940000163372 ENSGT00940000162554 Lemuriformes ANCESTRAL SPECIES 49 ENSGT00940000159565 #9 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT01050000244848.B.a.b #23 ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029.z #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00410000029400 ENSGT00940000163063 ENSGT00940000160311.g.b ENSGT00940000163372 ENSGT00940000162554 ENSGT00390000003601.a Lemuriformes_a ANCESTRAL SPECIES 95 ENSGT00940000159565 #9 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT01050000244848.B.a.b #23 ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 Coquerels sifaka MODERN SPECIES 56 GDPD2 (ENSPCOG00000025621) #8 DLG3 (ENSPCOG00000019220) #9 TEX11 (ENSPCOG00000016386) #10 SLC7A3 (ENSPCOG00000015546) SNX12 (ENSPCOG00000016031) #11 FOXO4 (ENSPCOG00000023388) #12 IL2RG (ENSPCOG00000022304) #14 MED12 (ENSPCOG00000023218) #15 NLGN3 (ENSPCOG00000015168) #16 GJB1 (ENSPCOG00000009326) #17 ZMYM3 (ENSPCOG00000022189) #18 NONO (ENSPCOG00000008197) #19 ITGB1BP2 (ENSPCOG00000020946) #20 ENSPCOG00000024110 ENSPCOG00000007901 #21 OGT (ENSPCOG00000017367) #22 CXCR3 (ENSPCOG00000022834) #23 NHSL2 (ENSPCOG00000021201) #25 ERCC6L (ENSPCOG00000024286) #27 RPS4X (ENSPCOG00000027468) ##28 CITED1 (ENSPCOG00000013588) #29 HDAC8 (ENSPCOG00000008094) #30 PHKA1 (ENSPCOG00000019881) #31 Greater bamboo lemur MODERN SPECIES 80 SLC7A3 (ENSPSMG00000025440) SNX12 (ENSPSMG00000025447) #11 FOXO4 (ENSPSMG00000025454) #12 ENSPSMG00000025457 #13 IL2RG (ENSPSMG00000025459) #14 MED12 (ENSPSMG00000025497) #15 NLGN3 (ENSPSMG00000025530) #16 GJB1 (ENSPSMG00000025538) #17 ZMYM3 (ENSPSMG00000025586) #18 NONO (ENSPSMG00000025616) #19 ITGB1BP2 (ENSPSMG00000025622) #20 ENSPSMG00000025624 ENSPSMG00000025626 ENSPSMG00000025630 ENSPSMG00000025686 #21 OGT (ENSPSMG00000025711) #22 Mouse lemur MODERN SPECIES 169 GDPD2 (ENSMICG00000028527) #8 DLG3 (ENSMICG00000012615) #9 TEX11 (ENSMICG00000009408) #10 SLC7A3 (ENSMICG00000011546) SNX12 (ENSMICG00000015016) #11 FOXO4 (ENSMICG00000030501) #12 IL2RG (ENSMICG00000013995) #14 MED12 (ENSMICG00000014009) #15 NLGN3 (ENSMICG00000014073) #16 GJB1 (ENSMICG00000014093) #17 ZMYM3 (ENSMICG00000014095) #18 NONO (ENSMICG00000000232) #19 ITGB1BP2 (ENSMICG00000000235) #20 ENSMICG00000042674 ENSMICG00000017461 #21 OGT (ENSMICG00000003078) #22 CXCR3 (ENSMICG00000038479) #23 ENSMICG00000038295 NHSL2 (ENSMICG00000008280) #25 ENSMICG00000001640 #26 ERCC6L (ENSMICG00000035415) #27 ENSMICG00000016606 #28 CITED1 (ENSMICG00000016613) #29 HDAC8 (ENSMICG00000007893) #30 ENSMICG00000028991 ENSMICG00000031459 PHKA1 (ENSMICG00000007902) #31 ENSMICG00000047883 ENSMICG00000043211 ENSMICG00000042715 ENSMICG00000047642 Bushbaby MODERN SPECIES 334 ENSOGAG00000034503 ENSOGAG00000028722 SLC7A3 (ENSOGAG00000006429) SNX12 (ENSOGAG00000008973) #11 FOXO4 (ENSOGAG00000025297) #12 CXorf65 (ENSOGAG00000008976) #13 IL2RG (ENSOGAG00000027643) #14 MED12 (ENSOGAG00000008978) #15 NLGN3 (ENSOGAG00000027118) #16 GJB1 (ENSOGAG00000024239) #17 ZMYM3 (ENSOGAG00000013708) #18 NONO (ENSOGAG00000004834) #19 ITGB1BP2 (ENSOGAG00000004835) #20 ENSOGAG00000026825 ENSOGAG00000012500 #21 OGT (ENSOGAG00000007524) #22 CXCR3 (ENSOGAG00000027782) #23 ENSOGAG00000031180 Laurasiatheria ANCESTRAL SPECIES 16 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00410000029400 ENSGT00940000163063 ENSGT00940000160311 ENSGT00940000163372 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000155085.b #22 Common shrew MODERN SPECIES 12016 OGT (ENSSARG00000006913) #22 Hedgehog MODERN SPECIES 4368 OGT (ENSEEUG00000002534) #22 Laurasiatheria_a ANCESTRAL SPECIES 10 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00410000029400 ENSGT00940000163063 ENSGT00940000160311 ENSGT00940000163372 Artiodactyla ANCESTRAL SPECIES 9 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00410000029400 ENSGT00940000163063 ENSGT00940000160311 ENSGT00940000163372 Suina ANCESTRAL SPECIES 7 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000160311.rb.b ENSGT00940000163372 ENSGT00940000162554 ENSGT00390000003601.a ENSGT00950000183041.A.f Pig MODERN SPECIES 300 TEX11 (ENSSSCG00000030850) #10 ENSSSCG00000025388 SLC7A3 (ENSSSCG00000024346) SNX12 (ENSSSCG00000012400) #11 FOXO4 (ENSSSCG00000012399) #12 CXorf65 (ENSSSCG00000030796) #13 IL2RG (ENSSSCG00000012397) #14 MED12 (ENSSSCG00000012396) #15 NLGN3 (ENSSSCG00000027465) #16 GJB1 (ENSSSCG00000012394) #17 ZMYM3 (ENSSSCG00000024163) #18 NONO (ENSSSCG00000023245) #19 ITGB1BP2 (ENSSSCG00000022209) #20 ENSSSCG00000012392 ENSSSCG00000027115 #21 OGT (ENSSSCG00000012403) #22 CXCR3 (ENSSSCG00000012402) #23 ENSSSCG00000057131 ENSSSCG00000052088 ENSSSCG00000053529 NHSL2 (ENSSSCG00000012408) #25 RTL5 (ENSSSCG00000020876) #24 PIN4 (ENSSSCG00000023312) #26 ERCC6L (ENSSSCG00000021834) #27 ENSSSCG00000012406 RPS4X (ENSSSCG00000012405) #28 ENSSSCG00000034717 CITED1 (ENSSSCG00000012409) #29 HDAC8 (ENSSSCG00000021200) #30 PHKA1 (ENSSSCG00000012411) #31 ENSSSCG00000063130 Chacoan peccary MODERN SPECIES 22 TEX11 (ENSCWAG00000000107) #10 SLC7A3 (ENSCWAG00000000045) SNX12 (ENSCWAG00000000023) #11 FOXO4 (ENSCWAG00000000015) #12 CXorf65 (ENSCWAG00000003586) #13 IL2RG (ENSCWAG00000003554) #14 MED12 (ENSCWAG00000003532) #15 NLGN3 (ENSCWAG00000003470) #16 ENSCWAG00000003459 GJB1 (ENSCWAG00000003454) #17 ZMYM3 (ENSCWAG00000003425) #18 NONO (ENSCWAG00000003409) #19 ITGB1BP2 (ENSCWAG00000003394) #20 ENSCWAG00000003383 ENSCWAG00000003266 #21 OGT (ENSCWAG00000003205) #22 CXCR3 (ENSCWAG00000003190) #23 ENSCWAG00000003178 RTL5 (ENSCWAG00000003169) #24 NHSL2 (ENSCWAG00000003145) #25 ERCC6L (ENSCWAG00000003127) #27 PIN4 (ENSCWAG00000003103) #26 ENSCWAG00000003080 #28 CITED1 (ENSCWAG00000003068) #29 HDAC8 (ENSCWAG00000003037) #30 PHKA1 (ENSCWAG00000002918) #31 ENSCWAG00000002873 ENSCWAG00000002863 ENSCWAG00000002857 ENSCWAG00000002841 NAP1L2 (ENSCWAG00000002830) Artiodactyla_a ANCESTRAL SPECIES 9 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00410000029400 ENSGT00940000163063 ENSGT00940000160311 ENSGT00940000163372 Camelidae ANCESTRAL SPECIES 43 ENSGT00940000159565 #9 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00940000173095 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00950000182963.b.b #25 ENSGT00940000163191 #24 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000163063 ENSGT00940000160311 ENSGT00940000163372 ENSGT00940000162554 Arabian camel MODERN SPECIES 204 TEX11 (ENSCDRG00005015952) #10 SLC7A3 (ENSCDRG00005016266) FOXO4 (ENSCDRG00005016475) #12 ENSCDRG00005016579 #13 IL2RG (ENSCDRG00005016638) #14 MED12 (ENSCDRG00005016792) #15 NLGN3 (ENSCDRG00005016916) #16 ENSCDRG00005017034 GJB1 (ENSCDRG00005017053) #17 ZMYM3 (ENSCDRG00005017134) #18 NONO (ENSCDRG00005017354) #19 ITGB1BP2 (ENSCDRG00005017480) #20 ENSCDRG00005017566 ENSCDRG00005017651 #21 ENSCDRG00005017785 OGT (ENSCDRG00005017831) #22 CXCR3 (ENSCDRG00005009075) #23 ENSCDRG00005009119 ENSCDRG00005009238 ENSCDRG00005009260 NHSL2 (ENSCDRG00005009450) #25 RTL5 (ENSCDRG00005009605) #24 PIN4 (ENSCDRG00005009624) #26 ERCC6L (ENSCDRG00005009654) #27 ENSCDRG00005009701 #28 CITED1 (ENSCDRG00005009756) #29 HDAC8 (ENSCDRG00005010238) #30 PHKA1 (ENSCDRG00005020606) #31 ENSCDRG00005020647 ENSCDRG00005020694 ENSCDRG00005020706 Alpaca MODERN SPECIES 2896 OGT (ENSVPAG00000000888) #22 ENSVPAG00000000891 Artiodactyla_b ANCESTRAL SPECIES 19 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00410000029400 ENSGT00940000163063 ENSGT00940000160311 ENSGT00940000163372 Cetacea ANCESTRAL SPECIES 19 ENSGT00940000154651 ENSGT00940000167707 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00950000182963.b.b #25 ENSGT00940000163191 #24 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00410000029400 ENSGT00940000163063 ENSGT00940000160311 ENSGT00940000163372 Odontoceti DUPLICATION Odontoceti ANCESTRAL SPECIES 19 ENSGT00940000154651 ENSGT00940000167707 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b.o #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00950000182963.b.b #25 ENSGT00940000163191 #24 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00410000029400 ENSGT00940000163063 ENSGT00940000160311 ENSGT00940000163372 Sperm whale DUPLICATION Sperm whale MODERN SPECIES 13 SLC7A3 (ENSPCTG00005009558) ENSPCTG00005009683 SNX12 (ENSPCTG00005009713) #11 FOXO4 (ENSPCTG00005009821) #12 ENSPCTG00005009919 #13 IL2RG (ENSPCTG00005010021) #14 MED12 (ENSPCTG00005010362) #15 NLGN3 (ENSPCTG00005010846) #16 ENSPCTG00005011228 GJB1 (ENSPCTG00005011243) #17 ZMYM3 (ENSPCTG00005011284) #18 NONO (ENSPCTG00005011492) #19 ITGB1BP2 (ENSPCTG00005011575) #20 ENSPCTG00005011800 TAF1 (ENSPCTG00005011907) #21 ENSPCTG00005012425 #22 ENSPCTG00005012056 CXCR3 (ENSPCTG00005012075) #23 NHSL2 (ENSPCTG00005012113) #25 ENSPCTG00005012239 #24 PIN4 (ENSPCTG00005012267) #26 ERCC6L (ENSPCTG00005012377) #27 RPS4X (ENSPCTG00005012433) #28 CITED1 (ENSPCTG00005012508) #29 HDAC8 (ENSPCTG00005012589) #30 ENSPCTG00005012840 PHKA1 (ENSPCTG00005012900) #31 ENSPCTG00005013403 NAP1L2 (ENSPCTG00005013426) CDX4 (ENSPCTG00005013461) CHIC1 (ENSPCTG00005013523) Sperm whale MODERN SPECIES 9 GPD1L (ENSPCTG00005009885) OSBPL10 (ENSPCTG00005009958) STT3B (ENSPCTG00005010073) GADL1 (ENSPCTG00005010232) TGFBR2 (ENSPCTG00005010537) RBMS3 (ENSPCTG00005010613) ENSPCTG00005011062 ENSPCTG00005011103 ZCWPW2 (ENSPCTG00005011151) AZI2 (ENSPCTG00005011209) CMC1 (ENSPCTG00005011334) EOMES (ENSPCTG00005011423) SLC4A7 (ENSPCTG00005011762) NEK10 (ENSPCTG00005013735) ENSPCTG00005013830 #22 ENSPCTG00005013947 #22 KHDRBS2 (ENSPCTG00005014001) PRIM2 (ENSPCTG00005014056) ENSPCTG00005014161 RAB23 (ENSPCTG00005014238) BAG2 (ENSPCTG00005014289) ZNF451 (ENSPCTG00005014342) KIAA1586 (ENSPCTG00005014495) BEND6 (ENSPCTG00005014566) DST (ENSPCTG00005015073) COL21A1 (ENSPCTG00005020038) BMP5 (ENSPCTG00005020211) HMGCLL1 (ENSPCTG00005020290) GFRAL (ENSPCTG00005020543) HCRTR2 (ENSPCTG00005020624) FAM83B (ENSPCTG00005020744) Odontoceti_a ANCESTRAL SPECIES 28 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b.o #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00950000182963.b.b #25 ENSGT00940000163191 #24 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.b.a.b.b ##28 ENSGT00390000005569.x.a.b.b.a.a ##28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00410000029400 ENSGT00940000163063 ENSGT00940000160311 Dolphin MODERN SPECIES 2857 ENSTTRG00000010458 #22 ENSTTRG00000010478 CXCR3 (ENSTTRG00000010486) #23 ENSTTRG00000010494 Odontoceti_b ANCESTRAL SPECIES 17 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00990000210226.a ENSGT00940000155085.b.o #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252.q ENSGT00950000182963.b.b #25 ENSGT00940000163191 #24 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.b.a.b.b ##28 ENSGT00530000063624.B #29 ENSGT00940000154546.xb.b ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00410000029400 ENSGT00940000163063 ENSGT00940000160311 Vaquita MODERN SPECIES 34 SLC7A3 (ENSPSNG00000017602) SNX12 (ENSPSNG00000017640) #11 FOXO4 (ENSPSNG00000017758) #12 ENSPSNG00000017842 #13 IL2RG (ENSPSNG00000017919) #14 MED12 (ENSPSNG00000018152) #15 NLGN3 (ENSPSNG00000018264) #16 ENSPSNG00000018473 GJB1 (ENSPSNG00000018489) #17 ZMYM3 (ENSPSNG00000018584) #18 NONO (ENSPSNG00000018816) #19 ITGB1BP2 (ENSPSNG00000018884) #20 ENSPSNG00000018987 ENSPSNG00000019045 #21 ENSPSNG00000019173 ENSPSNG00000019210 #22 ENSPSNG00000019258 CXCR3 (ENSPSNG00000019284) #23 ENSPSNG00000019317 ENSPSNG00000019357 ENSPSNG00000019407 ENSPSNG00000019652 NHSL2 (ENSPSNG00000019714) #25 RTL5 (ENSPSNG00000019829) #24 PIN4 (ENSPSNG00000019855) #26 ERCC6L (ENSPSNG00000019984) #27 ENSPSNG00000020028 #28 ENSPSNG00000020120 CITED1 (ENSPSNG00000020135) #29 HDAC8 (ENSPSNG00000020257) #30 ENSPSNG00000020488 Monodontidae ANCESTRAL SPECIES 19 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00990000210226.a ENSGT00940000155085.b.o #22 ENSGT01050000244848.B.a.b #23 ENSGT00950000182963.b.b #25 ENSGT00940000163191 #24 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.b.a.b.b ##28 ENSGT00530000063624.B #29 ENSGT00940000154546.xb.b ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00410000029400 ENSGT00940000163063 ENSGT00940000160311 ENSGT00940000163372 ENSGT00940000162554 Narwhal MODERN SPECIES 309 SLC7A3 (ENSMMNG00015009926) SNX12 (ENSMMNG00015009938) #11 FOXO4 (ENSMMNG00015009959) #12 ENSMMNG00015009977 #13 IL2RG (ENSMMNG00015009988) #14 MED12 (ENSMMNG00015010011) #15 NLGN3 (ENSMMNG00015010054) #16 ENSMMNG00015010069 GJB1 (ENSMMNG00015010078) #17 ZMYM3 (ENSMMNG00015010107) #18 NONO (ENSMMNG00015010158) #19 ITGB1BP2 (ENSMMNG00015010179) #20 ENSMMNG00015010213 ENSMMNG00015010247 #21 ENSMMNG00015010298 ENSMMNG00015010315 #22 CXCR3 (ENSMMNG00015010353) #23 NHSL2 (ENSMMNG00015010379) #25 RTL5 (ENSMMNG00015010410) #24 PIN4 (ENSMMNG00015010421) #26 ERCC6L (ENSMMNG00015010438) #27 RPS4X (ENSMMNG00015010476) ##28 ENSMMNG00015010498 CITED1 (ENSMMNG00015010507) #29 HDAC8 (ENSMMNG00015010620) #30 ENSMMNG00015010743 PHKA1 (ENSMMNG00015010994) #31 ENSMMNG00015011531 ENSMMNG00015011562 ENSMMNG00015011584 NAP1L2 (ENSMMNG00015011594) Beluga whale MODERN SPECIES 76 SLC7A3 (ENSDLEG00000008236) SNX12 (ENSDLEG00000008272) #11 FOXO4 (ENSDLEG00000008347) #12 ENSDLEG00000008374 #13 IL2RG (ENSDLEG00000008414) #14 MED12 (ENSDLEG00000008622) #15 NLGN3 (ENSDLEG00000008863) #16 ENSDLEG00000008931 GJB1 (ENSDLEG00000008941) #17 ZMYM3 (ENSDLEG00000008962) #18 NONO (ENSDLEG00000009056) #19 ITGB1BP2 (ENSDLEG00000009102) #20 ENSDLEG00000009235 ENSDLEG00000009348 #21 ENSDLEG00000009535 ENSDLEG00000009579 #22 CXCR3 (ENSDLEG00000009933) #23 Odontoceti DUPLICATION Odontoceti ANCESTRAL SPECIES ENSGT00940000155085.b.p.a #22 Odontoceti_a DUPLICATION Odontoceti_a DUPLICATION Odontoceti_a ANCESTRAL SPECIES ENSGT00940000155085.b.p.a.a.a #22 Odontoceti_b ANCESTRAL SPECIES ENSGT00940000155085.b.p.a.a.a #22 Vaquita DUPLICATION Vaquita MODERN SPECIES CEP170 (ENSPSNG00000002060) ENSPSNG00000002004 PLD5 (ENSPSNG00000001962) ENSPSNG00000001933 ENSPSNG00000001924 MAP1LC3C (ENSPSNG00000001915) EXO1 (ENSPSNG00000001879) WDR64 (ENSPSNG00000001764) ENSPSNG00000001713 CHML (ENSPSNG00000001704) KMO (ENSPSNG00000001618) FH (ENSPSNG00000001550) RGS7 (ENSPSNG00000001350) ENSPSNG00000001221 #22 ENSPSNG00000001209 ENSPSNG00000001192 #22 TMEM183A (ENSPSNG00000001164) PPFIA4 (ENSPSNG00000000975) MYOG (ENSPSNG00000000902) ADORA1 (ENSPSNG00000000886) MYBPH (ENSPSNG00000000847) ENSPSNG00000000822 ENSPSNG00000000806 BTG2 (ENSPSNG00000000796) FMOD (ENSPSNG00000000771) PRELP (ENSPSNG00000000625) OPTC (ENSPSNG00000000731) ATP2B4 (ENSPSNG00000000578) LAX1 (ENSPSNG00000000538) ENSPSNG00000000490 SNRPE (ENSPSNG00000000449) Vaquita MODERN SPECIES 9 ENSPSNG00000013114 KLF5 (ENSPSNG00000013052) ENSPSNG00000012991 ENSPSNG00000012931 PIBF1 (ENSPSNG00000012877) DIS3 (ENSPSNG00000012802) BORA (ENSPSNG00000012652) ENSPSNG00000012582 DACH1 (ENSPSNG00000012131) ENSPSNG00000011916 ENSPSNG00000019494 ENSPSNG00000019482 PCDH9 (ENSPSNG00000019382) KLHL1 (ENSPSNG00000019122) ENSPSNG00000019056 ENSPSNG00000019031 #22 ENSPSNG00000019011 PCDH20 (ENSPSNG00000018984) ENSPSNG00000018936 ENSPSNG00000018901 TDRD3 (ENSPSNG00000018838) DIAPH3 (ENSPSNG00000018689) ENSPSNG00000018611 ENSPSNG00000018599 PCDH17 (ENSPSNG00000018511) ENSPSNG00000018462 ENSPSNG00000018416 OLFM4 (ENSPSNG00000018251) PCDH8 (ENSPSNG00000018182) CNMD (ENSPSNG00000018053) SUGT1 (ENSPSNG00000018012) Monodontidae ANCESTRAL SPECIES ENSGT00940000155085.b.p.a.a.a #22 Narwhal MODERN SPECIES 286 ENSMMNG00015001569 #22 Odontoceti_a ANCESTRAL SPECIES ENSGT00940000155085.b.p.a.a.b #22 Dolphin DUPLICATION Dolphin DUPLICATION Dolphin DUPLICATION Dolphin DUPLICATION Dolphin DUPLICATION Dolphin MODERN SPECIES 5536 ENSTTRG00000021418 #22 Dolphin MODERN SPECIES 5578 ENSTTRG00000010742 #22 Dolphin MODERN SPECIES 5047 ENSTTRG00000005026 #22 Dolphin DUPLICATION Dolphin DUPLICATION Dolphin DUPLICATION Dolphin MODERN SPECIES 5606 ENSTTRG00000021452 #22 Dolphin MODERN SPECIES 5735 ENSTTRG00000021382 #22 Dolphin MODERN SPECIES 5506 ENSTTRG00000015316 #22 Dolphin MODERN SPECIES 5463 ENSTTRG00000006814 #22 Dolphin DUPLICATION Dolphin MODERN SPECIES 5402 ENSTTRG00000021468 #22 Dolphin MODERN SPECIES 4753 ENSTTRG00000007223 ENSTTRG00000007227 #22 Dolphin MODERN SPECIES 5421 ENSTTRG00000021391 #22 Odontoceti_b DUPLICATION Odontoceti_b ANCESTRAL SPECIES ENSGT00940000155085.b.p.a.a.b.c #22 Monodontidae ANCESTRAL SPECIES ENSGT00940000155085.b.p.a.a.b.c #22 Narwhal DUPLICATION Narwhal DUPLICATION Narwhal DUPLICATION Narwhal MODERN SPECIES 211 ENSMMNG00015007340 #22 Narwhal MODERN SPECIES 27 ENSMMNG00015000900 #22 Narwhal DUPLICATION Narwhal MODERN SPECIES 9 ENSMMNG00015000083 #22 Narwhal MODERN SPECIES 104 ENSMMNG00015004927 #22 ENSMMNG00015004920 #22 Narwhal MODERN SPECIES 253 ENSMMNG00015000873 #22 Vaquita MODERN SPECIES LAX1 (ENSPSNG00000000538) ATP2B4 (ENSPSNG00000000578) OPTC (ENSPSNG00000000731) PRELP (ENSPSNG00000000625) FMOD (ENSPSNG00000000771) BTG2 (ENSPSNG00000000796) ENSPSNG00000000806 ENSPSNG00000000822 MYBPH (ENSPSNG00000000847) ADORA1 (ENSPSNG00000000886) MYOG (ENSPSNG00000000902) PPFIA4 (ENSPSNG00000000975) TMEM183A (ENSPSNG00000001164) ENSPSNG00000001192 #22 ENSPSNG00000001209 ENSPSNG00000001221 #22 RGS7 (ENSPSNG00000001350) FH (ENSPSNG00000001550) KMO (ENSPSNG00000001618) CHML (ENSPSNG00000001704) ENSPSNG00000001713 WDR64 (ENSPSNG00000001764) EXO1 (ENSPSNG00000001879) MAP1LC3C (ENSPSNG00000001915) ENSPSNG00000001924 ENSPSNG00000001933 PLD5 (ENSPSNG00000001962) ENSPSNG00000002004 CEP170 (ENSPSNG00000002060) ENSPSNG00000002116 SDCCAG8 (ENSPSNG00000002144) Odontoceti_b ANCESTRAL SPECIES ENSGT00940000155085.b.p.a.a.b.d #22 Monodontidae ANCESTRAL SPECIES ENSGT00940000155085.b.p.a.a.b.d #22 Narwhal DUPLICATION Narwhal DUPLICATION Narwhal DUPLICATION Narwhal DUPLICATION Narwhal MODERN SPECIES 292 ENSMMNG00015001834 #22 Narwhal MODERN SPECIES 104 ENSMMNG00015004920 #22 ENSMMNG00015004927 #22 Narwhal MODERN SPECIES 290 ENSMMNG00015001796 #22 Narwhal MODERN SPECIES 87 ENSMMNG00015004759 #22 Narwhal MODERN SPECIES 29 ENSMMNG00015000931 #22 Vaquita DUPLICATION Vaquita MODERN SPECIES 14 CREBRF (ENSPSNG00000007099) BNIP1 (ENSPSNG00000007042) NKX2-5 (ENSPSNG00000007002) STC2 (ENSPSNG00000006970) ENSPSNG00000006924 CPEB4 (ENSPSNG00000006810) C5orf47 (ENSPSNG00000006745) ENSPSNG00000006717 NSG2 (ENSPSNG00000006661) MSX2 (ENSPSNG00000006615) DRD1 (ENSPSNG00000006598) SFXN1 (ENSPSNG00000006445) HRH2 (ENSPSNG00000006364) CPLX2 (ENSPSNG00000006307) ENSPSNG00000006253 ENSPSNG00000006028 #22 THOC3 (ENSPSNG00000005986) ENSPSNG00000005946 SIMC1 (ENSPSNG00000005913) KIAA1191 (ENSPSNG00000005862) ARL10 (ENSPSNG00000017820) NOP16 (ENSPSNG00000017778) ENSPSNG00000017747 CLTB (ENSPSNG00000017622) FAF2 (ENSPSNG00000017528) ENSPSNG00000017479 RNF44 (ENSPSNG00000017438) CDHR2 (ENSPSNG00000017130) SNCB (ENSPSNG00000016927) EIF4E1B (ENSPSNG00000016839) TSPAN17 (ENSPSNG00000016807) Vaquita MODERN SPECIES 4 DCTN1 (ENSPSNG00000013430) ENSPSNG00000013284 SLC4A5 (ENSPSNG00000012412) MTHFD2 (ENSPSNG00000012222) MOB1A (ENSPSNG00000012154) ENSPSNG00000012096 TET3 (ENSPSNG00000011888) DGUOK (ENSPSNG00000011764) ACTG2 (ENSPSNG00000011617) ENSPSNG00000011509 STAMBP (ENSPSNG00000011437) ENSPSNG00000011335 DUSP11 (ENSPSNG00000011224) TPRKB (ENSPSNG00000011166) ENSPSNG00000011132 ENSPSNG00000011057 #22 ENSPSNG00000011021 ENSPSNG00000010962 #22 ENSPSNG00000010914 ENSPSNG00000010874 ALMS1 (ENSPSNG00000010790) EGR4 (ENSPSNG00000010696) FBXO41 (ENSPSNG00000010548) ENSPSNG00000010519 CCT7 (ENSPSNG00000010258) PRADC1 (ENSPSNG00000010164) SMYD5 (ENSPSNG00000010059) NOTO (ENSPSNG00000009962) RAB11FIP5 (ENSPSNG00000009877) SFXN5 (ENSPSNG00000009721) EMX1 (ENSPSNG00000009636) Odontoceti_a ANCESTRAL SPECIES ENSGT00940000155085.b.p.a.b #22 Odontoceti_b ANCESTRAL SPECIES ENSGT00940000155085.b.p.a.b #22 Monodontidae ANCESTRAL SPECIES ENSGT00940000155085.b.p.a.b #22 Narwhal MODERN SPECIES 315 ENSMMNG00015017817 LMO7 (ENSMMNG00015018041) ENSMMNG00015018642 COMMD6 (ENSMMNG00015018693) TBC1D4 (ENSMMNG00015018825) KLF12 (ENSMMNG00015019076) ENSMMNG00015019092 KLF5 (ENSMMNG00015019110) PIBF1 (ENSMMNG00015019151) ENSMMNG00015019250 ENSMMNG00015019284 DIS3 (ENSMMNG00015019346) BORA (ENSMMNG00015019468) ENSMMNG00015019529 DACH1 (ENSMMNG00015019593) ENSMMNG00015019804 #22 ENSMMNG00015019820 ENSMMNG00015019835 ENSMMNG00015019859 ENSMMNG00015019903 PCDH9 (ENSMMNG00015019935) ENSMMNG00015019971 ENSMMNG00015019990 KLHL1 (ENSMMNG00015020052) PCDH20 (ENSMMNG00015020105) ENSMMNG00015020120 ENSMMNG00015020134 TDRD3 (ENSMMNG00015020168) DIAPH3 (ENSMMNG00015020329) ENSMMNG00015020730 PCDH17 (ENSMMNG00015020740) Beluga whale MODERN SPECIES 29 ENSDLEG00000007555 #22 ENSDLEG00000007550 PCDH20 (ENSDLEG00000007543) ENSDLEG00000007533 ENSDLEG00000007520 TDRD3 (ENSDLEG00000007511) DIAPH3 (ENSDLEG00000007477) ENSDLEG00000007455 PCDH17 (ENSDLEG00000007450) OLFM4 (ENSDLEG00000007414) PCDH8 (ENSDLEG00000007409) CNMD (ENSDLEG00000007399) SUGT1 (ENSDLEG00000007385) ELF1 (ENSDLEG00000007377) WBP4 (ENSDLEG00000007369) KBTBD6 (ENSDLEG00000007365) Sperm whale MODERN SPECIES 9 CMTM8 (ENSPCTG00005009769) GPD1L (ENSPCTG00005009885) OSBPL10 (ENSPCTG00005009958) STT3B (ENSPCTG00005010073) GADL1 (ENSPCTG00005010232) TGFBR2 (ENSPCTG00005010537) RBMS3 (ENSPCTG00005010613) ENSPCTG00005011062 ENSPCTG00005011103 ZCWPW2 (ENSPCTG00005011151) AZI2 (ENSPCTG00005011209) CMC1 (ENSPCTG00005011334) EOMES (ENSPCTG00005011423) SLC4A7 (ENSPCTG00005011762) NEK10 (ENSPCTG00005013735) ENSPCTG00005013830 #22 ENSPCTG00005013947 #22 KHDRBS2 (ENSPCTG00005014001) PRIM2 (ENSPCTG00005014056) ENSPCTG00005014161 RAB23 (ENSPCTG00005014238) BAG2 (ENSPCTG00005014289) ZNF451 (ENSPCTG00005014342) KIAA1586 (ENSPCTG00005014495) BEND6 (ENSPCTG00005014566) DST (ENSPCTG00005015073) COL21A1 (ENSPCTG00005020038) BMP5 (ENSPCTG00005020211) HMGCLL1 (ENSPCTG00005020290) GFRAL (ENSPCTG00005020543) HCRTR2 (ENSPCTG00005020624) Odontoceti DUPLICATION Odontoceti DUPLICATION Odontoceti ANCESTRAL SPECIES ENSGT00940000155085.b.p.b.a.a #22 Sperm whale DUPLICATION Sperm whale MODERN SPECIES 1281 ENSPCTG00005014633 #22 Sperm whale MODERN SPECIES 789 ENSPCTG00005017266 #22 Odontoceti_a ANCESTRAL SPECIES ENSGT00940000155085.b.p.b.a.a #22 Odontoceti_b ANCESTRAL SPECIES ENSGT00940000155085.b.p.b.a.a #22 Vaquita MODERN SPECIES 4 ENSPSNG00000009570 SPR (ENSPSNG00000009589) EMX1 (ENSPSNG00000009636) SFXN5 (ENSPSNG00000009721) RAB11FIP5 (ENSPSNG00000009877) NOTO (ENSPSNG00000009962) SMYD5 (ENSPSNG00000010059) PRADC1 (ENSPSNG00000010164) CCT7 (ENSPSNG00000010258) ENSPSNG00000010519 FBXO41 (ENSPSNG00000010548) EGR4 (ENSPSNG00000010696) ALMS1 (ENSPSNG00000010790) ENSPSNG00000010874 ENSPSNG00000010914 ENSPSNG00000010962 #22 ENSPSNG00000011021 ENSPSNG00000011057 #22 ENSPSNG00000011132 TPRKB (ENSPSNG00000011166) DUSP11 (ENSPSNG00000011224) ENSPSNG00000011335 STAMBP (ENSPSNG00000011437) ENSPSNG00000011509 ACTG2 (ENSPSNG00000011617) DGUOK (ENSPSNG00000011764) TET3 (ENSPSNG00000011888) ENSPSNG00000012096 MOB1A (ENSPSNG00000012154) MTHFD2 (ENSPSNG00000012222) SLC4A5 (ENSPSNG00000012412) Odontoceti ANCESTRAL SPECIES ENSGT00940000155085.b.p.b.a.b #22 Sperm whale MODERN SPECIES 3 TLX2 (ENSPCTG00005010624) DQX1 (ENSPCTG00005010737) AUP1 (ENSPCTG00005011089) HTRA2 (ENSPCTG00005011669) LOXL3 (ENSPCTG00005012638) DOK1 (ENSPCTG00005014240) M1AP (ENSPCTG00005014351) ENSPCTG00005014404 SEMA4F (ENSPCTG00005014463) HK2 (ENSPCTG00005015008) POLE4 (ENSPCTG00005015162) TACR1 (ENSPCTG00005015229) EVA1A (ENSPCTG00005015355) MRPL19 (ENSPCTG00005015403) GCFC2 (ENSPCTG00005015482) ENSPCTG00005016046 #22 ENSPCTG00005016158 ENSPCTG00005016299 ENSPCTG00005016767 ENSPCTG00005016867 ENSPCTG00005016907 ENSPCTG00005016924 ENSPCTG00005017031 #22 ENSPCTG00005017160 ENSPCTG00005017241 Odontoceti ANCESTRAL SPECIES ENSGT00940000155085.b.p.b.b #22 Sperm whale MODERN SPECIES 3 ENSPCTG00005017241 ENSPCTG00005017160 ENSPCTG00005017031 #22 ENSPCTG00005016924 ENSPCTG00005016907 ENSPCTG00005016867 ENSPCTG00005016767 ENSPCTG00005016299 ENSPCTG00005016158 ENSPCTG00005016046 #22 GCFC2 (ENSPCTG00005015482) MRPL19 (ENSPCTG00005015403) EVA1A (ENSPCTG00005015355) TACR1 (ENSPCTG00005015229) POLE4 (ENSPCTG00005015162) HK2 (ENSPCTG00005015008) SEMA4F (ENSPCTG00005014463) ENSPCTG00005014404 Blue whale DUPLICATION Blue whale MODERN SPECIES 40 SLC7A3 (ENSBMSG00010019048) ENSBMSG00010019077 SNX12 (ENSBMSG00010019093) #11 FOXO4 (ENSBMSG00010019131) #12 ENSBMSG00010019173 #13 IL2RG (ENSBMSG00010019221) #14 MED12 (ENSBMSG00010019347) #15 NLGN3 (ENSBMSG00010019420) #16 ENSBMSG00010019629 GJB1 (ENSBMSG00010019635) #17 ZMYM3 (ENSBMSG00010019664) #18 NONO (ENSBMSG00010019773) #19 ITGB1BP2 (ENSBMSG00010019802) #20 ENSBMSG00010019843 ENSBMSG00010019866 #21 ENSBMSG00010019935 #22 CXCR3 (ENSBMSG00010019965) #23 NHSL2 (ENSBMSG00010019980) #25 RTL5 (ENSBMSG00010020020) #24 PIN4 (ENSBMSG00010020035) #26 ERCC6L (ENSBMSG00010020056) #27 ENSBMSG00010020072 #28 CITED1 (ENSBMSG00010020081) #29 HDAC8 (ENSBMSG00010020145) #30 PHKA1 (ENSBMSG00010020455) #31 ENSBMSG00010020587 ENSBMSG00010020600 ENSBMSG00010020608 CDX4 (ENSBMSG00010020620) CHIC1 (ENSBMSG00010020642) ZCCHC13 (ENSBMSG00010020707) Blue whale MODERN SPECIES 14 DOCK6 (ENSBMSG00010010487) RAB3D (ENSBMSG00010010464) ENSBMSG00010010455 CCDC159 (ENSBMSG00010010437) PLPPR2 (ENSBMSG00010010415) SWSAP1 (ENSBMSG00010010407) EPOR (ENSBMSG00010010328) RGL3 (ENSBMSG00010010241) ODAD3 (ENSBMSG00010010100) PRKCSH (ENSBMSG00010010013) ELAVL3 (ENSBMSG00010009973) ZNF653 (ENSBMSG00010009937) ECSIT (ENSBMSG00010009916) CNN1 (ENSBMSG00010011852) ACP5 (ENSBMSG00010011821) ENSBMSG00010011792 #22 ZNF333 (ENSBMSG00010011781) ADGRE3 (ENSBMSG00010011759) ENSBMSG00010011745 NDUFB7 (ENSBMSG00010011737) TECR (ENSBMSG00010011712) DNAJB1 (ENSBMSG00010011696) GIPC1 (ENSBMSG00010011689) PTGER1 (ENSBMSG00010011682) PKN1 (ENSBMSG00010011639) DDX39A (ENSBMSG00010011608) ADGRE5 (ENSBMSG00010011593) ENSBMSG00010011582 ADGRL1 (ENSBMSG00010011541) ASF1B (ENSBMSG00010011510) PRKACA (ENSBMSG00010011474) Pecora ANCESTRAL SPECIES 27 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00940000163191.b.a #24 ENSGT00950000182963.b.b #25 ENSGT00940000163191.a #24 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000160311 ENSGT00410000029400 ENSGT00940000163063 Yarkand deer MODERN SPECIES 1323 SNX12 (ENSCHYG00000025217) #11 FOXO4 (ENSCHYG00000025133) #12 CXorf65 (ENSCHYG00000025096) #13 IL2RG (ENSCHYG00000025050) #14 MED12 (ENSCHYG00000024605) #15 NLGN3 (ENSCHYG00000024492) #16 ENSCHYG00000024456 ENSCHYG00000024447 GJB1 (ENSCHYG00000024428) #17 ZMYM3 (ENSCHYG00000024167) #18 NONO (ENSCHYG00000024105) #19 ENSCHYG00000024097 ITGB1BP2 (ENSCHYG00000023933) #20 ENSCHYG00000023878 ENSCHYG00000022934 #21 OGT (ENSCHYG00000022764) #22 ENSCHYG00000022668 CXCR3 (ENSCHYG00000022631) #23 ENSCHYG00000022594 RTL5 (ENSCHYG00000022577) #24 NHSL2 (ENSCHYG00000022300) #25 ERCC6L (ENSCHYG00000022233) #27 ENSCHYG00000022048 #26 ENSCHYG00000022005 #28 CITED1 (ENSCHYG00000021899) #29 HDAC8 (ENSCHYG00000021302) #30 ENSCHYG00000021251 PHKA1 (ENSCHYG00000014051) #31 ENSCHYG00000013611 NAP1L2 (ENSCHYG00000013551) CDX4 (ENSCHYG00000013503) Percora_a ANCESTRAL SPECIES 22 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00940000163191.b.a #24 ENSGT00950000182963.b.b #25 ENSGT00940000163191.a #24 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000160311 ENSGT00940000163063 ENSGT00410000029400 Siberian musk deer MODERN SPECIES 237 ENSMMSG00000001914 SNX12 (ENSMMSG00000001928) #11 FOXO4 (ENSMMSG00000001938) #12 CXorf65 (ENSMMSG00000001950) #13 IL2RG (ENSMMSG00000001966) #14 MED12 (ENSMMSG00000002028) #15 NLGN3 (ENSMMSG00000002246) #16 ENSMMSG00000002387 GJB1 (ENSMMSG00000002399) #17 ZMYM3 (ENSMMSG00000002448) #18 ENSMMSG00000002568 #19 ITGB1BP2 (ENSMMSG00000002607) #20 ENSMMSG00000002658 ENSMMSG00000002703 #21 ENSMMSG00000002917 OGT (ENSMMSG00000002941) #22 CXCR3 (ENSMMSG00000003013) #23 Bovidae ANCESTRAL SPECIES 23 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00940000163191.b.a #24 ENSGT00950000182963.b.b #25 ENSGT00940000163191.a #24 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00960000190675 ENSGT00950000183118.A.c.b #31 ENSGT00940000160311 ENSGT00940000163063 Caprinae ANCESTRAL SPECIES 50 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00940000163191.a #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00960000190675 ENSGT00950000183118.A.c.b #31 ENSGT00940000160311 ENSGT00940000163063 ENSGT00940000163372 Rambouillet Sheep MODERN SPECIES 205 ENSOARG00020023309 #11 FOXO4 (ENSOARG00020023355) #12 CXorf65 (ENSOARG00020023392) #13 IL2RG (ENSOARG00020023444) #14 MED12 (ENSOARG00020023622) #15 NLGN3 (ENSOARG00020024280) #16 ENSOARG00020024457 ENSOARG00020024470 GJB1 (ENSOARG00020024479) #17 ZMYM3 (ENSOARG00020024506) #18 NONO (ENSOARG00020024655) #19 ITGB1BP2 (ENSOARG00020024686) #20 ENSOARG00020024748 ENSOARG00020024762 ENSOARG00020024804 #21 OGT (ENSOARG00020025079) #22 CXCR3 (ENSOARG00020025135) #23 NHSL2 (ENSOARG00020025157) #25 RTL5 (ENSOARG00020025206) #24 PIN4 (ENSOARG00020025228) #26 ERCC6L (ENSOARG00020025281) #27 ENSOARG00020025291 #28 CITED1 (ENSOARG00020025298) #29 HDAC8 (ENSOARG00020025320) #30 ENSOARG00020025389 PHKA1 (ENSOARG00020025431) #31 ENSOARG00020025556 STAT4 (ENSOARG00020025579) STAT1 (ENSOARG00020025634) GLS (ENSOARG00020025702) ENSOARG00020025731 Goat MODERN SPECIES 29 KIF4A (ENSCHIG00000017710) GDPD2 (ENSCHIG00000024876) #8 DLG3 (ENSCHIG00000017006) #9 SLC7A3 (ENSCHIG00000012862) ENSCHIG00000021613 SNX12 (ENSCHIG00000017323) #11 FOXO4 (ENSCHIG00000013179) #12 CXorf65 (ENSCHIG00000022789) #13 IL2RG (ENSCHIG00000006485) #14 ENSCHIG00000026926 #15 NLGN3 (ENSCHIG00000026510) #16 ENSCHIG00000022971 GJB1 (ENSCHIG00000007733) #17 ENSCHIG00000007957 ENSCHIG00000020141 #21 OGT (ENSCHIG00000001994) #22 ENSCHIG00000003495 CXCR3 (ENSCHIG00000014964) #23 ENSCHIG00000020497 ENSCHIG00000015330 FGF16 (ENSCHIG00000011577) RTL5 (ENSCHIG00000009403) #24 NHSL2 (ENSCHIG00000018552) #25 PIN4 (ENSCHIG00000014397) #26 ERCC6L (ENSCHIG00000009967) #27 ENSCHIG00000023292 ##28 CITED1 (ENSCHIG00000019258) #29 PHKA1 (ENSCHIG00000021783) #31 ENSCHIG00000019337 #30 NAP1L2 (ENSCHIG00000016151) ENSCHIG00000020667 Bovinae ANCESTRAL SPECIES 38 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00940000163191.b.a #24 ENSGT00950000182963.b.b #25 ENSGT00940000163191.a #24 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00960000190675 ENSGT00950000183118.A.c.b #31 ENSGT00940000160311.`c ENSGT00940000162554 ENSGT00390000003601.a Bos ANCESTRAL SPECIES 30 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT01050000244848.B.a.b #23 ENSGT00940000163191.b.b #24 ENSGT00950000182963.b.b #25 ENSGT00940000163191.a #24 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00960000190675 ENSGT00950000183118.A.c.b #31 ENSGT00940000160311.`c ENSGT00940000162554 ENSGT00390000003601.a ENSGT00950000183041.A.f Bos_a ANCESTRAL SPECIES 19 ENSGT00950000182922.a.b.f ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00940000157838 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252.s.a.a ENSGT00940000163191.b.a #24 ENSGT00940000163191.a #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00960000190675 ENSGT00950000183118.A.c.b #31 ENSGT00940000163063 ENSGT00940000162554 ENSGT00390000003601.a ENSGT00950000183041.A.f Domestic yak MODERN SPECIES 69 SLC7A3 (ENSBGRG00000007140) ENSBGRG00000007098 SNX12 (ENSBGRG00000026130) #11 FOXO4 (ENSBGRG00000026112) #12 CXorf65 (ENSBGRG00000026105) #13 IL2RG (ENSBGRG00000026076) #14 MED12 (ENSBGRG00000025905) #15 NLGN3 (ENSBGRG00000025879) #16 ENSBGRG00000025866 GJB1 (ENSBGRG00000025862) #17 ENSBGRG00000025858 NONO (ENSBGRG00000025854) #19 ITGB1BP2 (ENSBGRG00000025809) #20 ENSBGRG00000025796 ENSBGRG00000025461 #21 OGT (ENSBGRG00000025338) #22 CXCR3 (ENSBGRG00000025320) #23 ENSBGRG00000025312 ENSBGRG00000025302 ENSBGRG00000025287 #24 ENSBGRG00000025269 #24 NHSL2 (ENSBGRG00000025208) #25 ERCC6L (ENSBGRG00000025193) #27 PIN4 (ENSBGRG00000025136) #26 ENSBGRG00000025116 ##28 CITED1 (ENSBGRG00000025098) #29 HDAC8 (ENSBGRG00000025035) #30 PHKA1 (ENSBGRG00000024454) #31 ENSBGRG00000024296 CDX4 (ENSBGRG00000024264) CHIC1 (ENSBGRG00000024180) Wild yak MODERN SPECIES 1212 ENSBMUG00000025321 ENSBMUG00000025317 SNX12 (ENSBMUG00000025311) #11 FOXO4 (ENSBMUG00000025299) #12 CXorf65 (ENSBMUG00000025287) #13 IL2RG (ENSBMUG00000025280) #14 MED12 (ENSBMUG00000025270) #15 NLGN3 (ENSBMUG00000025246) #16 ENSBMUG00000025223 ENSBMUG00000025221 GJB1 (ENSBMUG00000025217) #17 ZMYM3 (ENSBMUG00000025208) #18 NONO (ENSBMUG00000025182) #19 ITGB1BP2 (ENSBMUG00000025177) #20 ENSBMUG00000025052 #21 OGT (ENSBMUG00000024622) #22 CXCR3 (ENSBMUG00000024578) #23 Bos_b ANCESTRAL SPECIES 12 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT01050000244848.B.a.b #23 ENSGT00940000163191.b.a #24 ENSGT00950000182963.b.b #25 ENSGT00940000163191.a #24 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000160311.`c ENSGT00940000162554 ENSGT00390000003601.a ENSGT00950000183041.A.f ENSGT00940000159450 Cow MODERN SPECIES 177 SLC7A3 (ENSBTAG00000007403) ENSBTAG00000051077 SNX12 (ENSBTAG00000007871) #11 FOXO4 (ENSBTAG00000004879) #12 CXHXorf65 (ENSBTAG00000032209) #13 IL2RG (ENSBTAG00000007626) #14 MED12 (ENSBTAG00000021351) #15 NLGN3 (ENSBTAG00000007708) #16 ENSBTAG00000020513 ENSBTAG00000052224 GJB1 (ENSBTAG00000020512) #17 ZMYM3 (ENSBTAG00000008492) #18 NONO (ENSBTAG00000012152) #19 ITGB1BP2 (ENSBTAG00000012163) #20 ENSBTAG00000006878 #21 OGT (ENSBTAG00000000902) #22 CXCR3 (ENSBTAG00000014798) #23 ENSBTAG00000049525 RTL5 (ENSBTAG00000047545) #24 NHSL2 (ENSBTAG00000045565) #25 PIN4 (ENSBTAG00000047376) #26 ERCC6L (ENSBTAG00000005607) #27 RPS4X (ENSBTAG00000018800) #28 CITED1 (ENSBTAG00000045925) #29 ENSBTAG00000052692 HDAC8 (ENSBTAG00000046092) #30 PHKA1 (ENSBTAG00000015848) #31 ENSBTAG00000051767 #31 ENSBTAG00000050902 ENSBTAG00000051474 ENSBTAG00000052491 Hybrid Bos Indicus MODERN SPECIES 315 SLC7A3 (ENSBIXG00005028304) ENSBIXG00005028269 #11 FOXO4 (ENSBIXG00005028156) #12 CXorf65 (ENSBIXG00005005333) #13 IL2RG (ENSBIXG00005028084) #14 MED12 (ENSBIXG00005028011) #15 NLGN3 (ENSBIXG00005027780) #16 ENSBIXG00005027705 GJB1 (ENSBIXG00005027688) #17 ENSBIXG00005027673 ZMYM3 (ENSBIXG00005027636) #18 NONO (ENSBIXG00005027407) #19 ITGB1BP2 (ENSBIXG00005027370) #20 ENSBIXG00005027225 ENSBIXG00005027194 #21 OGT (ENSBIXG00005026815) #22 CXCR3 (ENSBIXG00005026720) #23 ENSBIXG00005004565 ##28 ENSBIXG00005026702 ENSBIXG00005004560 ENSBIXG00005026670 ENSBIXG00005026656 ENSBIXG00005026633 NHSL2 (ENSBIXG00005007203) #25 RTL5 (ENSBIXG00005026448) #24 PIN4 (ENSBIXG00005026438) #26 ERCC6L (ENSBIXG00005026427) #27 ENSBIXG00005026386 #28 CITED1 (ENSBIXG00005026354) #29 HDAC8 (ENSBIXG00005026224) #30 PHKA1 (ENSBIXG00005006185) #31 American bison MODERN SPECIES 1928 ENSBBBG00000005216 #22 Laurasiatheria_b ANCESTRAL SPECIES 10 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00410000029400 ENSGT00940000163063 ENSGT00940000160311 ENSGT00940000163372 Carnivora ANCESTRAL SPECIES 11 ENSGT00390000006492 #10 ENSGT00940000154651.i ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000163063 ENSGT00410000029400 ENSGT00940000160311 ENSGT00940000163372 Caniformia ANCESTRAL SPECIES 22 ENSGT00390000006492 #10 ENSGT00940000154651.i ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000163063 ENSGT00940000163372 ENSGT00940000162554 ENSGT00390000003601.a Caniformia_b ANCESTRAL SPECIES 24 ENSGT00390000006492 #10 ENSGT00940000154651.i ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00950000182963.b.b #25 ENSGT00940000163191 #24 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000163063 ENSGT00940000163372 ENSGT00940000162554 ENSGT00390000003601.a Ursidae ANCESTRAL SPECIES 47 ENSGT00390000006492 #10 ENSGT00940000154651.i ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00950000182963.b.b #25 ENSGT00940000163191 #24 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00410000029400 ENSGT00940000163372 ENSGT00940000162554 ENSGT00390000003601.a Ursus ANCESTRAL SPECIES 169 ENSGT00940000159565 #9 ENSGT00390000006492 #10 ENSGT00940000154651.i ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT01050000244848.B.a.b #23 Polar bear MODERN SPECIES 482 DLG3 (ENSUMAG00000000284) #9 TEX11 (ENSUMAG00000000267) #10 ENSUMAG00000000251 SNX12 (ENSUMAG00000000076) #11 FOXO4 (ENSUMAG00000022372) #12 CXorf65 (ENSUMAG00000022368) #13 IL2RG (ENSUMAG00000022364) #14 MED12 (ENSUMAG00000021719) #15 NLGN3 (ENSUMAG00000021571) #16 ENSUMAG00000021567 #17 ENSUMAG00000021554 #18 NONO (ENSUMAG00000021550) #19 ITGB1BP2 (ENSUMAG00000021532) #20 ENSUMAG00000021490 ENSUMAG00000020997 #21 OGT (ENSUMAG00000020914) #22 American black bear MODERN SPECIES 2308 OGT (ENSUAMG00000022455) #22 CXCR3 (ENSUAMG00000022459) #23 Giant Panda MODERN SPECIES 2288 DLG3 (ENSAMEG00000009332) #9 TEX11 (ENSAMEG00000009389) #10 ENSAMEG00000009415 SNX12 (ENSAMEG00000015880) #11 FOXO4 (ENSAMEG00000015896) #12 IL2RG (ENSAMEG00000015899) #14 MED12 (ENSAMEG00000015922) #15 NLGN3 (ENSAMEG00000016005) #16 ENSAMEG00000024290 GJB1 (ENSAMEG00000019546) #17 ZMYM3 (ENSAMEG00000016021) #18 NONO (ENSAMEG00000016057) #19 ITGB1BP2 (ENSAMEG00000016081) #20 ENSAMEG00000019575 ENSAMEG00000016102 #21 OGT (ENSAMEG00000016129) #22 ENSAMEG00000016181 CXCR3 (ENSAMEG00000019767) #23 ENSAMEG00000025938 NHSL2 (ENSAMEG00000018764) #25 ENSAMEG00000018760 #24 ENSAMEG00000005801 ERCC6L (ENSAMEG00000005804) #27 RPS4X (ENSAMEG00000005805) #28 ENSAMEG00000027356 #29 HDAC8 (ENSAMEG00000005840) #30 PHKA1 (ENSAMEG00000005856) #31 ENSAMEG00000026180 NAP1L2 (ENSAMEG00000026435) CDX4 (ENSAMEG00000002483) CHIC1 (ENSAMEG00000016309) Mustelinae ANCESTRAL SPECIES 110 ENSGT00390000006492 #10 ENSGT00940000154651.i ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.b.b ##28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000163063 American mink MODERN SPECIES 255 DLG3 (ENSNVIG00000008521) #9 ENSNVIG00000008666 #10 ENSNVIG00000008715 SNX12 (ENSNVIG00000008769) #11 FOXO4 (ENSNVIG00000008791) #12 CXorf65 (ENSNVIG00000008844) #13 IL2RG (ENSNVIG00000008859) #14 MED12 (ENSNVIG00000008903) #15 NLGN3 (ENSNVIG00000009227) #16 ENSNVIG00000009256 GJB1 (ENSNVIG00000009257) #17 ZMYM3 (ENSNVIG00000009277) #18 NONO (ENSNVIG00000009509) #19 ITGB1BP2 (ENSNVIG00000009599) #20 ENSNVIG00000009687 #21 OGT (ENSNVIG00000009883) #22 CXCR3 (ENSNVIG00000009939) #23 Ferret MODERN SPECIES 402 ENSMPUG00000018487 TEX11 (ENSMPUG00000004580) #10 ENSMPUG00000004592 SNX12 (ENSMPUG00000004597) #11 ENSMPUG00000004633 FOXO4 (ENSMPUG00000004635) #12 IL2RG (ENSMPUG00000004651) #14 MED12 (ENSMPUG00000004666) #15 NLGN3 (ENSMPUG00000004705) #16 GJB1 (ENSMPUG00000018489) #17 ZMYM3 (ENSMPUG00000004915) #18 NONO (ENSMPUG00000004937) #19 ITGB1BP2 (ENSMPUG00000004948) #20 ENSMPUG00000005070 ENSMPUG00000005076 #21 OGT (ENSMPUG00000005097) #22 ENSMPUG00000005256 CXCR3 (ENSMPUG00000005263) #23 ENSMPUG00000005269 ENSMPUG00000005276 RTL5 (ENSMPUG00000018491) #24 NHSL2 (ENSMPUG00000005280) #25 PIN4 (ENSMPUG00000005287) #26 ERCC6L (ENSMPUG00000005291) #27 ENSMPUG00000005294 ##28 CITED1 (ENSMPUG00000005336) #29 HDAC8 (ENSMPUG00000005345) #30 PHKA1 (ENSMPUG00000005353) #31 ENSMPUG00000005379 Canidae ANCESTRAL SPECIES 59 ENSGT00390000006492 #10 ENSGT00390000008294.e.a.b.d.a ENSGT00940000154651.i ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442.`b #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000163063 ENSGT00940000163372 ENSGT00940000162554 ENSGT00390000003601.a Canis_lupus ANCESTRAL SPECIES 44 ENSGT00390000006492 #10 ENSGT00390000008294.e.a.b.d.a ENSGT00940000154651.i ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442.`b #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029.eb.a #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000163063 ENSGT00940000163372 ENSGT00940000162554 ENSGT00390000003601.a Dog MODERN SPECIES 144 KIF4A (ENSCAFG00845029242) GDPD2 (ENSCAFG00845029411) #8 DLG3 (ENSCAFG00845015765) #9 TEX11 (ENSCAFG00845016162) #10 ENSCAFG00845016597 FOXO4 (ENSCAFG00845016814) #12 CXHXorf65 (ENSCAFG00845016900) #13 IL2RG (ENSCAFG00845017057) #14 NLGN3 (ENSCAFG00845017213) #16 GJB1 (ENSCAFG00845017329) #17 ZMYM3 (ENSCAFG00845017392) #18 ENSCAFG00845017688 #19 ITGB1BP2 (ENSCAFG00845017817) #20 ENSCAFG00845017943 TAF1 (ENSCAFG00845018115) #21 OGT (ENSCAFG00845018937) #22 ENSCAFG00845019086 CXCR3 (ENSCAFG00845019157) #23 ENSCAFG00845019192 ENSCAFG00845019289 NHSL2 (ENSCAFG00845019495) #25 ENSCAFG00845019851 RTL5 (ENSCAFG00845019888) #24 PIN4 (ENSCAFG00845019941) #26 ERCC6L (ENSCAFG00845019976) #27 RPS4X (ENSCAFG00845020005) #28 CITED1 (ENSCAFG00845020063) #29 HDAC8 (ENSCAFG00845020238) #30 ENSCAFG00845023674 #31 ENSCAFG00845029726 ENSCAFG00845029763 Dingo MODERN SPECIES 265 ENSCAFG00020019293 ENSCAFG00020019302 SNX12 (ENSCAFG00020019309) #11 FOXO4 (ENSCAFG00020019312) #12 CXorf65 (ENSCAFG00020019316) #13 IL2RG (ENSCAFG00020019321) #14 MED12 (ENSCAFG00020019415) #15 NLGN3 (ENSCAFG00020020274) #16 GJB1 (ENSCAFG00020020275) #17 ENSCAFG00020020279 #18 ENSCAFG00020020289 #18 NONO (ENSCAFG00020020298) #19 ITGB1BP2 (ENSCAFG00020020322) #20 ENSCAFG00020020337 ENSCAFG00020020386 #21 OGT (ENSCAFG00020021017) #22 CXCR3 (ENSCAFG00020021299) #23 ENSCAFG00020021301 NHSL2 (ENSCAFG00020021306) #25 ENSCAFG00020021311 #26 ERCC6L (ENSCAFG00020021313) #27 ENSCAFG00020021317 ##28 CITED1 (ENSCAFG00020021325) #29 HDAC8 (ENSCAFG00020021326) #30 PHKA1 (ENSCAFG00020021553) #31 ENSCAFG00020024502 ENSCAFG00020024506 ENSCAFG00020024512 NAP1L2 (ENSCAFG00020024516) ENSCAFG00020024517 CHIC1 (ENSCAFG00020024519) Red fox MODERN SPECIES 175 ENSVVUG00000006897 SLC7A3 (ENSVVUG00000006862) ENSVVUG00000006852 SNX12 (ENSVVUG00000006829) #11 FOXO4 (ENSVVUG00000006808) #12 CUNHXorf65 (ENSVVUG00000006802) #13 IL2RG (ENSVVUG00000006782) #14 MED12 (ENSVVUG00000005546) #15 NLGN3 (ENSVVUG00000005403) #16 GJB1 (ENSVVUG00000005399) #17 ZMYM3 (ENSVVUG00000003481) #18 NONO (ENSVVUG00000003390) #19 ITGB1BP2 (ENSVVUG00000003333) #20 ENSVVUG00000003285 TAF1 (ENSVVUG00000000579) #21 OGT (ENSVVUG00000000263) #22 ENSVVUG00000000213 CXCR3 (ENSVVUG00000000156) #23 ENSVVUG00000000109 RTL5 (ENSVVUG00000025514) #24 NHSL2 (ENSVVUG00000025513) #25 ERCC6L (ENSVVUG00000025512) #27 RPS4X (ENSVVUG00000025510) ##28 CITED1 (ENSVVUG00000025509) #29 HDAC8 (ENSVVUG00000025508) #30 PHKA1 (ENSVVUG00000025468) #31 Felidae ANCESTRAL SPECIES 12 ENSGT00390000006492 #10 ENSGT00940000154651.i ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00390000010779.a.b.b.e.b ENSGT00950000182963.b.b #25 ENSGT00940000163191 #24 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000163063 ENSGT00410000029400 ENSGT00940000160311 Panthera ANCESTRAL SPECIES 47 ENSGT00390000006492 #10 ENSGT00940000154651.i ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00390000010779.a.b.b.e.b ENSGT00950000182963.b.b #25 ENSGT00510000047029.ib #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000163063 Tiger MODERN SPECIES 294 SNX12 (ENSPTIG00000020442) #11 FOXO4 (ENSPTIG00000019903) #12 CXorf65 (ENSPTIG00000019621) #13 IL2RG (ENSPTIG00000017306) #14 MED12 (ENSPTIG00000001944) #15 NLGN3 (ENSPTIG00000019225) #16 GJB1 (ENSPTIG00000018725) #17 ENSPTIG00000016941 #18 NONO (ENSPTIG00000016068) #19 ITGB1BP2 (ENSPTIG00000013486) #20 ENSPTIG00000006525 ENSPTIG00000018701 #21 OGT (ENSPTIG00000015486) #22 ENSPTIG00000015173 ENSPTIG00000006296 #24 NHSL2 (ENSPTIG00000014385) #25 ENSPTIG00000013728 #26 Panthera_a ANCESTRAL SPECIES 56 ENSGT00390000006492 #10 ENSGT00940000154651.i ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00390000010779.a.b.b.e.b ENSGT00950000182963.b.b #25 ENSGT00510000047029.ib #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 lion DUPLICATION lion MODERN SPECIES 88 ENSPLOG00000022184 SNX12 (ENSPLOG00000022162) #11 FOXO4 (ENSPLOG00000022132) #12 CXorf65 (ENSPLOG00000022113) #13 IL2RG (ENSPLOG00000022088) #14 MED12 (ENSPLOG00000021997) #15 NLGN3 (ENSPLOG00000021916) #16 ENSPLOG00000021882 GJB1 (ENSPLOG00000021868) #17 ZMYM3 (ENSPLOG00000021746) #18 NONO (ENSPLOG00000021684) #19 ITGB1BP2 (ENSPLOG00000021634) #20 ENSPLOG00000021598 ENSPLOG00000021269 #21 ENSPLOG00000021138 #22 ENSPLOG00000021106 #22 ENSPLOG00000021053 CXCR3 (ENSPLOG00000021020) #23 ENSPLOG00000020959 ENSPLOG00000020915 RTL5 (ENSPLOG00000020907) #24 NHSL2 (ENSPLOG00000020815) #25 ERCC6L (ENSPLOG00000020765) #27 ENSPLOG00000020673 #26 ENSPLOG00000020555 #28 CITED1 (ENSPLOG00000020526) #29 HDAC8 (ENSPLOG00000020404) #30 ENSPLOG00000020264 #31 ENSPLOG00000020226 HUWE1 (ENSPLOG00000019431) ENSPLOG00000019275 lion MODERN SPECIES 88 TEX11 (ENSPLOG00000022220) #10 ENSPLOG00000022184 SNX12 (ENSPLOG00000022162) #11 FOXO4 (ENSPLOG00000022132) #12 CXorf65 (ENSPLOG00000022113) #13 IL2RG (ENSPLOG00000022088) #14 MED12 (ENSPLOG00000021997) #15 NLGN3 (ENSPLOG00000021916) #16 ENSPLOG00000021882 GJB1 (ENSPLOG00000021868) #17 ZMYM3 (ENSPLOG00000021746) #18 NONO (ENSPLOG00000021684) #19 ITGB1BP2 (ENSPLOG00000021634) #20 ENSPLOG00000021598 ENSPLOG00000021269 #21 ENSPLOG00000021138 #22 ENSPLOG00000021106 #22 ENSPLOG00000021053 CXCR3 (ENSPLOG00000021020) #23 ENSPLOG00000020959 ENSPLOG00000020915 RTL5 (ENSPLOG00000020907) #24 NHSL2 (ENSPLOG00000020815) #25 ERCC6L (ENSPLOG00000020765) #27 ENSPLOG00000020673 #26 ENSPLOG00000020555 #28 CITED1 (ENSPLOG00000020526) #29 HDAC8 (ENSPLOG00000020404) #30 ENSPLOG00000020264 #31 ENSPLOG00000020226 HUWE1 (ENSPLOG00000019431) leopard MODERN SPECIES 118 GDPD2 (ENSPPRG00000004509) #8 DLG3 (ENSPPRG00000004403) #9 TEX11 (ENSPPRG00000003898) #10 ENSPPRG00000002635 SNX12 (ENSPPRG00000001773) #11 FOXO4 (ENSPPRG00000001707) #12 CXorf65 (ENSPPRG00000001425) #13 IL2RG (ENSPPRG00000022646) #14 MED12 (ENSPPRG00000022880) #15 NLGN3 (ENSPPRG00000024139) #16 GJB1 (ENSPPRG00000020781) #17 ZMYM3 (ENSPPRG00000024250) #18 ENSPPRG00000024537 #19 ITGB1BP2 (ENSPPRG00000024651) #20 ENSPPRG00000021334 #21 OGT (ENSPPRG00000014898) #22 CXCR3 (ENSPPRG00000014822) #23 NHSL2 (ENSPPRG00000014783) #25 ENSPPRG00000013119 ENSPPRG00000020329 #24 ENSPPRG00000013099 #26 Cat MODERN SPECIES 252 GDPD2 (ENSFCAG00000008635) #8 DLG3 (ENSFCAG00000008636) #9 TEX11 (ENSFCAG00000029781) #10 ENSFCAG00000011209 SNX12 (ENSFCAG00000014799) #11 FOXO4 (ENSFCAG00000031493) #12 ENSFCAG00000036011 #13 IL2RG (ENSFCAG00000014802) #14 MED12 (ENSFCAG00000014803) #15 NLGN3 (ENSFCAG00000014804) #16 ZMYM3 (ENSFCAG00000014806) #18 NONO (ENSFCAG00000043511) #19 ITGB1BP2 (ENSFCAG00000014807) #20 ENSFCAG00000021936 ENSFCAG00000014809 #21 OGT (ENSFCAG00000002182) #22 ENSFCAG00000051813 CXCR3 (ENSFCAG00000002186) #23 NHSL2 (ENSFCAG00000009225) #25 ENSFCAG00000037362 RTL5 (ENSFCAG00000024876) #24 PIN4 (ENSFCAG00000012036) #26 ERCC6L (ENSFCAG00000012038) #27 CITED1 (ENSFCAG00000023693) #29 HDAC8 (ENSFCAG00000005065) #30 PHKA1 (ENSFCAG00000007121) #31 ENSFCAG00000050490 ENSFCAG00000045208 ENSFCAG00000036265 ENSFCAG00000043804 ENSFCAG00000039701 Laurasiatheria_c ANCESTRAL SPECIES 10 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00410000029400 ENSGT00940000163063 ENSGT00940000160311 ENSGT00940000163372 Equus ANCESTRAL SPECIES 27 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252.y.b ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00410000029400 ENSGT00940000163063 ENSGT00940000160311 ENSGT00940000163372 Horse MODERN SPECIES 480 SNX12 (ENSECAG00000036345) #11 FOXO4 (ENSECAG00000015262) #12 CXorf65 (ENSECAG00000048248) #13 IL2RG (ENSECAG00000016543) #14 MED12 (ENSECAG00000023931) #15 NLGN3 (ENSECAG00000020995) #16 GJB1 (ENSECAG00000060252) #17 ENSECAG00000027978 ZMYM3 (ENSECAG00000000294) #18 ENSECAG00000044396 NONO (ENSECAG00000008502) #19 ITGB1BP2 (ENSECAG00000015383) #20 ENSECAG00000002323 ENSECAG00000006365 #21 ENSECAG00000058792 OGT (ENSECAG00000023721) #22 ENSECAG00000023391 CXCR3 (ENSECAG00000023587) #23 ENSECAG00000055137 ENSECAG00000040049 ENSECAG00000039787 ENSECAG00000032482 NHSL2 (ENSECAG00000002472) #25 RTL5 (ENSECAG00000023894) #24 PIN4 (ENSECAG00000000364) #26 ERCC6L (ENSECAG00000002513) #27 RPS4X (ENSECAG00000010852) ##28 CITED1 (ENSECAG00000056091) #29 HDAC8 (ENSECAG00000018525) #30 PHKA1 (ENSECAG00000023809) #31 ENSECAG00000033249 Donkey MODERN SPECIES 36 TEX11 (ENSEASG00005031198) #10 SLC7A3 (ENSEASG00005021419) SNX12 (ENSEASG00005026084) #11 ENSEASG00005023680 #12 IL2RG (ENSEASG00005015966) #14 MED12 (ENSEASG00005014678) #15 NLGN3 (ENSEASG00005014556) #16 GJB1 (ENSEASG00005027527) #17 ENSEASG00005035014 ZMYM3 (ENSEASG00005014438) #18 NONO (ENSEASG00005031467) #19 ITGB1BP2 (ENSEASG00005036980) #20 ENSEASG00005025769 ENSEASG00005022163 #21 ENSEASG00005007044 OGT (ENSEASG00005020382) #22 ENSEASG00005035444 ENSEASG00005020354 #23 ENSEASG00005037481 ENSEASG00005035382 NHSL2 (ENSEASG00005031208) #25 RTL5 (ENSEASG00005028557) #24 PIN4 (ENSEASG00005007027) #26 ERCC6L (ENSEASG00005007025) #27 ENSEASG00005032986 #28 CITED1 (ENSEASG00005010784) #29 HDAC8 (ENSEASG00005023051) #30 PHKA1 (ENSEASG00005022796) #31 ENSEASG00005030313 ENSEASG00005030915 ENSEASG00005010399 Chiroptera ANCESTRAL SPECIES 62 ENSGT00940000159625 #8 ENSGT00940000159565 #9 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000163063 ENSGT00940000160311 ENSGT00940000163372 ENSGT00920000150764 Megabat MODERN SPECIES 3366 OGT (ENSPVAG00000016731) #22 ENSPVAG00000016733 Microchiroptera ANCESTRAL SPECIES 54 ENSGT00940000159565 #9 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.a.b.a #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000163063 ENSGT00940000160311 ENSGT00940000163372 ENSGT00920000150764 ENSGT00940000162554 Microbat MODERN SPECIES 941 SLC7A3 (ENSMLUG00000023615) ENSMLUG00000027108 SNX12 (ENSMLUG00000008587) #11 FOXO4 (ENSMLUG00000029037) #12 CXorf65 (ENSMLUG00000006897) #13 IL2RG (ENSMLUG00000006913) #14 MED12 (ENSMLUG00000006933) #15 NLGN3 (ENSMLUG00000006994) #16 GJB1 (ENSMLUG00000007012) #17 ZMYM3 (ENSMLUG00000007032) #18 ENSMLUG00000026033 NONO (ENSMLUG00000002489) #19 ITGB1BP2 (ENSMLUG00000022665) #20 ENSMLUG00000009092 #21 ENSMLUG00000023133 OGT (ENSMLUG00000008213) #22 CXCR3 (ENSMLUG00000008266) #23 ENSMLUG00000027587 RTL5 (ENSMLUG00000012246) #24 NHSL2 (ENSMLUG00000012253) #25 PIN4 (ENSMLUG00000012073) #26 ERCC6L (ENSMLUG00000011670) #27 RPS4X (ENSMLUG00000011685) ##28 ENSMLUG00000006172 CITED1 (ENSMLUG00000005401) #29 ENSMLUG00000005406 #30 PHKA1 (ENSMLUG00000005413) #31 NAP1L2 (ENSMLUG00000001703) ENSMLUG00000027332 CHIC1 (ENSMLUG00000025620) ZCCHC13 (ENSMLUG00000002814) Greater horseshoe bat DUPLICATION Greater horseshoe bat MODERN SPECIES SLC7A3 (ENSRFEG00010000056) ENSRFEG00010000055 SNX12 (ENSRFEG00010000054) #11 FOXO4 (ENSRFEG00010000053) #12 CXorf65 (ENSRFEG00010000052) #13 IL2RG (ENSRFEG00010000051) #14 MED12 (ENSRFEG00010000050) #15 NLGN3 (ENSRFEG00010000049) #16 GJB1 (ENSRFEG00010000048) #17 ZMYM3 (ENSRFEG00010000047) #18 ENSRFEG00010000046 #19 ITGB1BP2 (ENSRFEG00010000045) #20 ENSRFEG00010000043 ENSRFEG00010000042 ENSRFEG00010000041 #21 ENSRFEG00010000039 #22 CXCR3 (ENSRFEG00010000037) #23 ENSRFEG00010000036 ENSRFEG00010000035 RTL5 (ENSRFEG00010000034) #24 NHSL2 (ENSRFEG00010000033) #25 ERCC6L (ENSRFEG00010000032) #27 PIN4 (ENSRFEG00010000031) #26 ENSRFEG00010000030 #28 ENSRFEG00010000029 #29 HDAC8 (ENSRFEG00010000028) #30 PHKA1 (ENSRFEG00010000027) #31 ENSRFEG00010000026 ENSRFEG00010000025 ENSRFEG00010000024 NAP1L2 (ENSRFEG00010000023) Greater horseshoe bat MODERN SPECIES 7 PLCE1 (ENSRFEG00010018013) SLC35G1 (ENSRFEG00010018063) LGI1 (ENSRFEG00010010383) FRA10AC1 (ENSRFEG00010010722) PDE6C (ENSRFEG00010010979) RBP4 (ENSRFEG00010011311) FFAR4 (ENSRFEG00010011376) CEP55 (ENSRFEG00010011430) MYOF (ENSRFEG00010011628) CYP26A1 (ENSRFEG00010011911) CYP26C1 (ENSRFEG00010012145) EXOC6 (ENSRFEG00010012254) HHEX (ENSRFEG00010012651) KIF11 (ENSRFEG00010012728) IDE (ENSRFEG00010013085) ENSRFEG00010013898 #22 MARCHF5 (ENSRFEG00010013915) CPEB3 (ENSRFEG00010013948) BTAF1 (ENSRFEG00010014065) FGFBP3 (ENSRFEG00010014160) PPP1R3C (ENSRFEG00010015867) HECTD2 (ENSRFEG00010015920) PCGF5 (ENSRFEG00010016595) RPP30 (ENSRFEG00010016677) HTR7 (ENSRFEG00010016754) KIF20B (ENSRFEG00010016868) ENSRFEG00010018605 PANK1 (ENSRFEG00010018634) SLC16A12 (ENSRFEG00010018846) IFIT5 (ENSRFEG00010018858) IFIT1 (ENSRFEG00010018894) Atlantogenata ANCESTRAL SPECIES 61 ENSGT00940000159625 #8 ENSGT00940000159565 #9 ENSGT00940000167940 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.b ##28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000163063 ENSGT00940000160311 ENSGT00940000163372 ENSGT00940000162554 Afrotheria ANCESTRAL SPECIES 71 ENSGT00940000159625 #8 ENSGT00940000159565 #9 ENSGT00940000167940 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.b ##28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000160311 ENSGT00940000163372 ENSGT00940000162554 ENSGT00390000003601.a Afrotheria_a ANCESTRAL SPECIES 70 ENSGT00940000159625 #8 ENSGT00940000159565 #9 ENSGT00940000167940 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 ENSGT00940000163191 #24 ENSGT00950000182963.b.b #25 ENSGT00510000047029 #26 ENSGT00940000156837 #27 ENSGT00390000005569.x.b ##28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00940000160311 ENSGT00940000163372 ENSGT00940000162554 ENSGT00390000003601.a ENSGT00950000183041.A.f Elephant MODERN SPECIES 251 GDPD2 (ENSLAFG00000011119) #8 DLG3 (ENSLAFG00000000254) #9 ENSLAFG00000000255 SLC7A3 (ENSLAFG00000003361) SNX12 (ENSLAFG00000016995) #11 FOXO4 (ENSLAFG00000028324) #12 ENSLAFG00000007296 #13 IL2RG (ENSLAFG00000007299) #14 MED12 (ENSLAFG00000026945) #15 NLGN3 (ENSLAFG00000017399) #16 GJB1 (ENSLAFG00000017404) #17 ZMYM3 (ENSLAFG00000022555) #18 NONO (ENSLAFG00000013422) #19 ITGB1BP2 (ENSLAFG00000000808) #20 ENSLAFG00000001269 #21 OGT (ENSLAFG00000008655) #22 CXCR3 (ENSLAFG00000029972) #23 ENSLAFG00000027894 ENSLAFG00000032112 RTL5 (ENSLAFG00000028394) #24 ENSLAFG00000030373 #25 ENSLAFG00000000637 #25 PIN4 (ENSLAFG00000018261) #26 ERCC6L (ENSLAFG00000014985) #27 RPS4X (ENSLAFG00000002654) ##28 CITED1 (ENSLAFG00000017528) #29 HDAC8 (ENSLAFG00000008515) #30 PHKA1 (ENSLAFG00000006928) #31 ENSLAFG00000023096 NAP1L2 (ENSLAFG00000026154) CDX4 (ENSLAFG00000016806) Hyrax MODERN SPECIES 3532 OGT (ENSPCAG00000004818) #22 Tenrec MODERN SPECIES 4229 OGT (ENSETEG00000004924) #22 ENSETEG00000004933 Xenarthra ANCESTRAL SPECIES 1104 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 ENSGT00390000015252 Armadillo MODERN SPECIES 3445 ENSDNOG00000010671 #21 ENSDNOG00000009910 OGT (ENSDNOG00000002746) #22 ENSDNOG00000002747 CXCR3 (ENSDNOG00000036071) #23 ENSDNOG00000038788 ENSDNOG00000045738 ENSDNOG00000037594 NHSL2 (ENSDNOG00000015744) #25 Marsupialia ANCESTRAL SPECIES 29 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979 #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 Marsupialia_b ANCESTRAL SPECIES 31 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979.a #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 Diprotodontia ANCESTRAL SPECIES 60 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979.a #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 Diprotodontia_a ANCESTRAL SPECIES 58 ENSGT00390000006492 #10 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00510000048979.a #14 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT00960000187885 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT01050000244848.B.a.b #23 koala MODERN SPECIES 294 ENSPCIG00000028996 #10 SLC7A3 (ENSPCIG00000028993) SNX12 (ENSPCIG00000019019) #11 FOXO4 (ENSPCIG00000019018) #12 ENSPCIG00000033106 #13 IL2RG (ENSPCIG00000019016) #14 MED12 (ENSPCIG00000016230) #15 NLGN3 (ENSPCIG00000016246) #16 ENSPCIG00000014639 GJB1 (ENSPCIG00000014641) #17 ENSPCIG00000034843 NONO (ENSPCIG00000026515) #19 ITGB1BP2 (ENSPCIG00000026518) #20 ENSPCIG00000035045 ENSPCIG00000026519 #21 OGT (ENSPCIG00000026962) #22 CXCR3 (ENSPCIG00000026971) #23 Common wonbat MODERN SPECIES 1055 ENSVURG00010012743 #9 ENSVURG00010012737 #9 ENSVURG00010012724 #10 SLC7A3 (ENSVURG00010012695) FOXO4 (ENSVURG00010012687) #12 ENSVURG00010012680 #13 IL2RG (ENSVURG00010012673) #14 MED12 (ENSVURG00010012554) #15 NLGN3 (ENSVURG00010012514) #16 GJB1 (ENSVURG00010012493) #17 ZMYM3 (ENSVURG00010012455) #18 NONO (ENSVURG00010012440) #19 ITGB1BP2 (ENSVURG00010012424) #20 ENSVURG00010012416 ENSVURG00010012371 #21 OGT (ENSVURG00010012313) #22 ENSVURG00010012300 CXCR3 (ENSVURG00010012295) #23 ERCC6L (ENSVURG00010012293) #27 PIN4 (ENSVURG00010012291) #26 NHSL2 (ENSVURG00010012280) #25 Wallaby MODERN SPECIES 5424 OGT (ENSMEUG00000011091) #22 Tasmanian devil MODERN SPECIES 21 ENSSHAG00000026190 #25 ENSSHAG00000001331 #27 ENSSHAG00000032240 #11 ENSSHAG00000027025 #12 ENSSHAG00000003465 #13 ENSSHAG00000030098 #14 ENSSHAG00000029422 #14 MED12 (ENSSHAG00000002403) #15 NLGN3 (ENSSHAG00000032070) #16 GJB1 (ENSSHAG00000010488) #17 ZMYM3 (ENSSHAG00000010343) #18 NONO (ENSSHAG00000010195) #19 ENSSHAG00000010159 #20 ENSSHAG00000029465 ENSSHAG00000009760 #21 OGT (ENSSHAG00000009442) #22 ENSSHAG00000026176 ENSSHAG00000026488 #23 ENSSHAG00000028976 #10 DLG3 (ENSSHAG00000000523) #9 GDPD2 (ENSSHAG00000003751) #8 KIF4A (ENSSHAG00000004174) ENSSHAG00000005380 ENSSHAG00000005481 P2RY4 (ENSSHAG00000005885) AWAT1 (ENSSHAG00000006103) DGAT2L6 (ENSSHAG00000006542) ENSSHAG00000007341 AWAT2 (ENSSHAG00000007709) EDA (ENSSHAG00000024660) ENSSHAG00000024662 Opossum MODERN SPECIES 627 ENSMODG00000004798 KIF4A (ENSMODG00000004864) GDPD2 (ENSMODG00000004895) #8 DLG3 (ENSMODG00000004962) #9 ENSMODG00000004985 #10 SLC7A3 (ENSMODG00000005060) SNX12 (ENSMODG00000040979) #11 ENSMODG00000051071 #12 ENSMODG00000005088 #14 NLGN3 (ENSMODG00000004381) #16 GJB1 (ENSMODG00000004387) #17 ZMYM3 (ENSMODG00000004419) #18 NONO (ENSMODG00000004445) #19 ENSMODG00000004464 #20 ENSMODG00000004570 #21 OGT (ENSMODG00000004615) #22 ENSMODG00000050336 #23 ENSMODG00000005348 APEX2 (ENSMODG00000005341) ALAS2 (ENSMODG00000005320) ENSMODG00000006295 ENSMODG00000005289 ENSMODG00000005275 PAK3 (ENSMODG00000005255) CAPN6 (ENSMODG00000005238) ENSMODG00000037776 ENSMODG00000005175 ENSMODG00000005159 ENSMODG00000005054 LHFPL1 (ENSMODG00000005109) AMOT (ENSMODG00000005098) Platypus MODERN SPECIES 17 KIF4A (ENSOANG00000037746) GDPD2 (ENSOANG00000040894) #8 ENSOANG00000044641 #9 ENSOANG00000042735 #9 SLC7A3 (ENSOANG00000039209) SNX12 (ENSOANG00000049766) #11 ENSOANG00000039891 #13 ENSOANG00000048839 #14 MED12 (ENSOANG00000041618) #15 ENSOANG00000051330 #16 GJB1 (ENSOANG00000011537) #17 ZMYM3 (ENSOANG00000043784) #18 NONO (ENSOANG00000041847) #19 ENSOANG00000000801 ENSOANG00000048582 #21 OGT (ENSOANG00000045272) #22 CXCR3 (ENSOANG00000040299) #23 ENSOANG00000040671 ENSOANG00000051309 MARS2 (ENSOANG00000036489) RAB33A (ENSOANG00000042063) SLC25A14 (ENSOANG00000039097) SLC25A31 (ENSOANG00000041177) ENSOANG00000037414 ENSOANG00000046890 ENSOANG00000042078 ENSOANG00000050483 ENSOANG00000038122 ENSOANG00000042754 ENSOANG00000049907 PIGY (ENSOANG00000046406) Sauria ANCESTRAL SPECIES 21 ENSGT00940000159334 #12 ENSGT00950000183168.C ENSGT00510000049291 #13 ENSGT00940000164309 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000235750 ENSGT01030000234513.B.a #17 ENSGT01050000244864.B.a ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000167446 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 Archelosauria ANCESTRAL SPECIES 24 ENSGT00940000159334 #12 ENSGT00950000183168.C ENSGT00510000049291 #13 ENSGT00940000164309 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000235750 ENSGT01030000234513.B.a #17 ENSGT01050000244864.B.a ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000167446 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 Archosauria ANCESTRAL SPECIES 15 ENSGT00390000000155.a.b ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000235750 ENSGT01030000234513.B.a #17 ENSGT01050000244864.B.a ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000167446 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT00390000005569 #28 ENSGT00530000063624.B #29 ENSGT00940000157843 #30 ENSGT00950000183118.A.c.b #31 ENSGT00950000185662 ENSGT00940000160940 ENSGT00940000159479 ENSGT00940000164406 ENSGT00940000160459 ENSGT00940000163305.a.b ENSGT00940000161397 ENSGT00940000162502 ENSGT00530000063484.b.a ENSGT00390000000360 #36 Aves ANCESTRAL SPECIES 23 ENSGT00390000003197 ENSGT00390000000155.a.b ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000235750 ENSGT01030000234513.B.a #17 ENSGT01050000244864.B.a ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT00390000000360 #36 ENSGT00390000006885 ENSGT00390000012647 ENSGT00940000154783 ENSGT00940000160294 ENSGT00940000158744 ENSGT00510000047092 ENSGT00390000016992 ENSGT00530000063723.b ENSGT00940000154325.a ENSGT00390000013235 ENSGT00940000153467.a.b ENSGT00390000001289.b.a ENSGT00940000160861 Neognathae ANCESTRAL SPECIES 22 ENSGT00390000003197 ENSGT00390000000155.a.b ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000235750 ENSGT01030000234513.B.a #17 ENSGT01050000244864.B.a ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT00390000000360 #36 ENSGT00390000006885 ENSGT00390000012647 ENSGT00940000154783 ENSGT00940000160294 ENSGT00940000158744 ENSGT00510000047092 ENSGT00390000016992 ENSGT00530000063723.b ENSGT00940000154325.a ENSGT00390000013235 ENSGT00940000153467.a.b ENSGT00390000001289.b.a ENSGT00940000160861 Galloanserae ANCESTRAL SPECIES 21 ENSGT00390000003197 ENSGT00390000000155.a.b ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000235750 ENSGT01030000234513.B.a #17 ENSGT01050000244864.B.a ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT00390000000360 #36 ENSGT00390000006885 ENSGT00390000012647 ENSGT00940000154783 ENSGT00940000160294 ENSGT00940000158744 ENSGT00510000047092 ENSGT00390000016992 ENSGT00530000063723.b ENSGT00940000154325.a ENSGT00390000013235 ENSGT00940000153467.a.b ENSGT00390000001289.b.a ENSGT00940000160861 Anatidae ANCESTRAL SPECIES 24 ENSGT00390000000155.a.b ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00510000049291 #13 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000235750 ENSGT01030000234513.B.a #17 ENSGT01050000244864.B.a ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00390000000360 #36 ENSGT00390000006885 ENSGT00390000012647 ENSGT00940000154783 ENSGT00940000160294 ENSGT00940000158744 ENSGT00510000047092 ENSGT00390000016992 ENSGT00530000063723.b ENSGT00940000154325.a ENSGT00390000013235 ENSGT00940000153467.a.b ENSGT00390000001289.b.a ENSGT00940000160861 ENSGT00940000164465 Duck MODERN SPECIES 1 SLC7A3 (ENSAPLG00000014008) FOXO4 (ENSAPLG00000014578) #12 ENSAPLG00000021497 #13 ENSAPLG00000017284 MED12 (ENSAPLG00000014908) #15 NLGN3 (ENSAPLG00000015814) #16 ENSAPLG00000017769 GJB1 (ENSAPLG00000001256) #17 ENSAPLG00000023238 ZMYM3 (ENSAPLG00000000982) #18 NONO (ENSAPLG00000002642) #19 ENSAPLG00000020913 #20 ENSAPLG00000002871 #20 ENSAPLG00000001261 ENSAPLG00000003176 #21 OGT (ENSAPLG00000003836) #22 BRCC3 (ENSAPLG00000004484) #36 ENSAPLG00000004773 CMC4 (ENSAPLG00000004774) FUNDC2 (ENSAPLG00000023815) ENSAPLG00000018190 MPP1 (ENSAPLG00000005377) ENSAPLG00000022850 TRMT2B (ENSAPLG00000013756) TMEM35A (ENSAPLG00000013684) CENPI (ENSAPLG00000013427) DRP2 (ENSAPLG00000012832) ENSAPLG00000030086 TAF7 (ENSAPLG00000012103) ENSAPLG00000028144 ENSAPLG00000023799 Pink-footed goose MODERN SPECIES 4 SNX12 (ENSABRG00000019287) #11 FOXO4 (ENSABRG00000019294) #12 ENSABRG00000019296 ENSABRG00000019298 MED12 (ENSABRG00000019390) #15 NLGN3 (ENSABRG00000020266) #16 ENSABRG00000020269 GJB1 (ENSABRG00000020272) #17 ENSABRG00000020277 ZMYM3 (ENSABRG00000020281) #18 NONO (ENSABRG00000020285) #19 ENSABRG00000020289 #20 ENSABRG00000020291 #20 ENSABRG00000020293 ENSABRG00000020298 #21 OGT (ENSABRG00000020308) #22 BRCC3 (ENSABRG00000020312) #36 ENSABRG00000020314 CMC4 (ENSABRG00000020318) FUNDC2 (ENSABRG00000020321) F8 (ENSABRG00000020325) MPP1 (ENSABRG00000020339) DKC1 (ENSABRG00000020373) ENSABRG00000020519 ENSABRG00000020525 TRMT2B (ENSABRG00000020531) TMEM35A (ENSABRG00000020541) CENPI (ENSABRG00000020563) DRP2 (ENSABRG00000020575) ENSABRG00000020601 TAF7 (ENSABRG00000000225) Phasianidae ANCESTRAL SPECIES 2 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00950000183168.C ENSGT00510000049291 #13 ENSGT00940000164309 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000235750 ENSGT01030000234513.B.a #17 ENSGT01050000244864.B.a ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT00390000000360 #36 ENSGT00390000006885 ENSGT00390000012647 ENSGT00940000154783 ENSGT00940000160294.e ENSGT00940000158744 ENSGT00510000047092 ENSGT00390000016992 ENSGT00530000063723.b ENSGT00940000154325.a ENSGT00390000013235 ENSGT00940000153467.a.b ENSGT00390000001289.b.a ENSGT00940000160861 Japanese quail MODERN SPECIES 22 SLC7A3 (ENSCJPG00005013155) SNX12 (ENSCJPG00005013153) #11 FOXO4 (ENSCJPG00005013152) #12 ENSCJPG00005013147 CXorf65 (ENSCJPG00005013146) #13 IL2RG (ENSCJPG00005013142) MED12 (ENSCJPG00005012353) #15 NLGN3 (ENSCJPG00005012351) #16 GJB1 (ENSCJPG00005012350) #17 ENSCJPG00005012349 ZMYM3 (ENSCJPG00005012036) #18 NONO (ENSCJPG00005012035) #19 ITGB1BP2 (ENSCJPG00005012034) #20 ENSCJPG00005012033 ENSCJPG00005011210 #21 OGT (ENSCJPG00005011185) #22 ENSCJPG00005011183 BRCC3 (ENSCJPG00005011181) #36 CMC4 (ENSCJPG00005011180) FUNDC2 (ENSCJPG00005011179) F8 (ENSCJPG00005010798) MPP1 (ENSCJPG00005010790) DKC1 (ENSCJPG00005010783) ENSCJPG00005010782 ENSCJPG00005010781 TRMT2B (ENSCJPG00005010767) TMEM35A (ENSCJPG00005010765) CENPI (ENSCJPG00005010763) DRP2 (ENSCJPG00005010733) ENSCJPG00005010661 TAF7 (ENSCJPG00005010660) Phasianidae_b ANCESTRAL SPECIES 24 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00950000183168.C ENSGT00510000049291 #13 ENSGT00940000164309 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000235750 ENSGT01030000234513.B.a #17 ENSGT01050000244864.B.a ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT00390000000360 #36 ENSGT00390000006885 ENSGT00390000012647 ENSGT00940000154783 ENSGT00940000160294.f ENSGT00940000160294.e ENSGT00940000158744 ENSGT00510000047092 ENSGT00390000016992 ENSGT00530000063723.b ENSGT00940000154325.a ENSGT00390000013235 ENSGT00940000153467.a.b ENSGT00390000001289.b.a Turkey MODERN SPECIES 29 ENSMGAG00000019202 ENSMGAG00000009438 ENSMGAG00000009349 ENSMGAG00000009381 ENSMGAG00000009394 ENSMGAG00000017229 ENSMGAG00000009277 ENSMGAG00000009291 ENSMGAG00000009294 ENSMGAG00000009210 ENSMGAG00000009238 F8 (ENSMGAG00000009126) ENSMGAG00000022925 ENSMGAG00000018060 ENSMGAG00000009096 ENSMGAG00000009002 #22 ENSMGAG00000009056 #36 ENSMGAG00000008944 #21 ENSMGAG00000015720 ENSMGAG00000008886 #20 NONO (ENSMGAG00000008869) #19 ENSMGAG00000018977 ENSMGAG00000016262 #17 ENSMGAG00000020314 ENSMGAG00000008735 #18 NLGN3 (ENSMGAG00000008705) #16 CXorf65 (ENSMGAG00000008608) #13 ENSMGAG00000008610 MED12 (ENSMGAG00000008639) #15 ENSMGAG00000007664 ENSMGAG00000002173 #12 Chicken MODERN SPECIES 33 SNX12 (ENSGALG00010018459) #11 FOXO4 (ENSGALG00010018436) #12 ENSGALG00010018422 CXorf65 (ENSGALG00010018412) #13 IL2RG (ENSGALG00010018404) MED12 (ENSGALG00010018395) #15 NLGN3 (ENSGALG00010018372) #16 ENSGALG00010017126 GJB1 (ENSGALG00010017111) #17 ENSGALG00010017083 ZMYM3 (ENSGALG00010017034) #18 NONO (ENSGALG00010017010) #19 ITGB1BP2 (ENSGALG00010016999) #20 RHOG2 (ENSGALG00010016989) TAF1 (ENSGALG00010016946) #21 OGT (ENSGALG00010016932) #22 ENSGALG00010016923 BRCC3 (ENSGALG00010016913) #36 ENSGALG00010016895 CMC4 (ENSGALG00010016908) FUNDC2 (ENSGALG00010016889) ENSGALG00010015655 ENSGALG00010015567 MPP1 (ENSGALG00010015558) DKC1 (ENSGALG00010015521) ENSGALG00010019345 ENSGALG00010014702 TRMT2B (ENSGALG00010014739) TMEM35A (ENSGALG00010014716) CENPI (ENSGALG00010016129) DRP2 (ENSGALG00010016053) Neognathae_b ANCESTRAL SPECIES ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00950000183168.C ENSGT00940000164309 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000235750 ENSGT01030000234513.B.a #17 ENSGT01050000244864.B.a ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT00390000000360 #36 ENSGT00390000006885 ENSGT00390000012647 ENSGT00940000154783 ENSGT00940000160294 ENSGT00940000158744 ENSGT00510000047092 ENSGT00390000016992 ENSGT00530000063723.b ENSGT00940000154325.a ENSGT00390000013235 ENSGT00940000153467.a.b ENSGT00390000001289.b.a ENSGT00940000160861 Neognathae_c ANCESTRAL SPECIES 29 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00950000183168.C ENSGT00940000164309 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000235750 ENSGT01030000234513.B.a #17 ENSGT01050000244864.B.a ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT00390000000360 #36 ENSGT00390000012647 ENSGT00390000006885 ENSGT00940000154783 ENSGT00940000160294 ENSGT00940000158744 ENSGT00510000047092 ENSGT00390000016992 ENSGT00530000063723.b ENSGT00940000154325.a ENSGT00390000013235 ENSGT00940000153467.a.b ENSGT00390000001289.b.a ENSGT00940000160861 Golden eagle MODERN SPECIES 13 SNX12 (ENSACCG00020014063) #11 FOXO4 (ENSACCG00020014069) #12 ENSACCG00020014086 ENSACCG00020014106 ENSACCG00020014133 MED12 (ENSACCG00020014227) #15 NLGN3 (ENSACCG00020014327) #16 GJB1 (ENSACCG00020014346) #17 ENSACCG00020014356 ENSACCG00020014365 ZMYM3 (ENSACCG00020014399) #18 NONO (ENSACCG00020014457) #19 ITGB1BP2 (ENSACCG00020014465) #20 ENSACCG00020014483 ENSACCG00020014521 #21 OGT (ENSACCG00020014611) #22 BRCC3 (ENSACCG00020014638) #36 CMC4 (ENSACCG00020014649) ENSACCG00020014656 FUNDC2 (ENSACCG00020014669) F8 (ENSACCG00020014710) MPP1 (ENSACCG00020014751) DKC1 (ENSACCG00020014798) ENSACCG00020014848 TRMT2B (ENSACCG00020014885) TMEM35A (ENSACCG00020014894) CENPI (ENSACCG00020014920) DRP2 (ENSACCG00020014974) ENSACCG00020015024 TAF7 (ENSACCG00020015043) ENSACCG00020015062 Kakapo MODERN SPECIES 52 SNX12 (ENSSHBG00005018167) #11 FOXO4 (ENSSHBG00005018165) #12 ENSSHBG00005018159 ENSSHBG00005018156 MED12 (ENSSHBG00005018147) #15 NLGN3 (ENSSHBG00005018139) #16 ENSSHBG00005018135 GJB1 (ENSSHBG00005018132) #17 ENSSHBG00005018131 ZMYM3 (ENSSHBG00005018125) #18 NONO (ENSSHBG00005018120) #19 ENSSHBG00005018116 ITGB1BP2 (ENSSHBG00005018113) #20 ENSSHBG00005018108 ENSSHBG00005016622 #21 OGT (ENSSHBG00005016471) #22 ENSSHBG00005016467 ENSSHBG00005016464 ENSSHBG00005016459 ENSSHBG00005016455 Passeriformes ANCESTRAL SPECIES 30 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00950000183168.C ENSGT00940000164309 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000235750 ENSGT01030000234513.B.a #17 ENSGT01050000244864.B.a ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT00390000000360 #36 ENSGT00390000006885 ENSGT00390000012647 ENSGT00940000154783 ENSGT00940000160294 ENSGT00940000158744 ENSGT00510000047092 ENSGT00390000016992 ENSGT00530000063723.b ENSGT00940000154325.a ENSGT00390000013235 ENSGT00940000153467.a.b ENSGT00390000001289.b.a ENSGT00940000160861 Passeriformes_d ANCESTRAL SPECIES 31 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00950000183168.C ENSGT00940000164309 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000235750 ENSGT01030000234513.B.a #17 ENSGT01050000244864.B.a ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT00390000000360 #36 ENSGT00390000006885 ENSGT00390000012647 ENSGT00940000154783 ENSGT00940000160294.b ENSGT00940000158744 ENSGT00510000047092 ENSGT00390000016992 ENSGT00530000063723.b ENSGT00940000154325.a ENSGT00390000013235 ENSGT00940000153467.a.b ENSGT00390000001289.b.a ENSGT00940000160861 Flycatcher MODERN SPECIES 23 ENSFALG00000025845 TEX11 (ENSFALG00000011937) #10 ENSFALG00000028172 SLC7A3 (ENSFALG00000011909) SNX12 (ENSFALG00000011859) #11 FOXO4 (ENSFALG00000011852) #12 ENSFALG00000011840 IL2RG (ENSFALG00000027822) MED12 (ENSFALG00000011809) #15 NLGN3 (ENSFALG00000025390) #16 NONO (ENSFALG00000011765) #19 ZMYM3 (ENSFALG00000011770) #18 ITGB1BP2 (ENSFALG00000011761) #20 ENSFALG00000028749 ENSFALG00000011723 #21 OGT (ENSFALG00000011699) #22 ENSFALG00000028456 BRCC3 (ENSFALG00000011686) #36 ENSFALG00000011680 CMC4 (ENSFALG00000011670) FUNDC2 (ENSFALG00000025901) F8 (ENSFALG00000011595) MPP1 (ENSFALG00000028592) DKC1 (ENSFALG00000024706) ENSFALG00000011475 TMEM35A (ENSFALG00000011472) CENPI (ENSFALG00000011467) DRP2 (ENSFALG00000011456) ENSFALG00000011437 ENSFALG00000024164 ENSFALG00000011414 Passeriformes_g ANCESTRAL SPECIES 23 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00950000183168.C ENSGT00940000164309 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000235750 ENSGT01030000234513.B.a #17 ENSGT01050000244864.B.a ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT00390000000360 #36 ENSGT00390000006885 ENSGT00390000012647 ENSGT00940000154783 ENSGT00940000160294.b ENSGT00940000158744 ENSGT00510000047092 ENSGT00390000016992 ENSGT00530000063723.b ENSGT00940000154325.a ENSGT00390000013235 ENSGT00940000153467.a.b ENSGT00390000001289.b.a ENSGT00940000160861 Passeroidea ANCESTRAL SPECIES 25 ENSGT00940000154651 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00950000183168.C ENSGT00940000164309 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000235750 ENSGT01030000234513.B.a #17 ENSGT01050000244864.B.a ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 ENSGT00390000000360 #36 ENSGT00390000006885 ENSGT00390000012647 ENSGT00940000154783 ENSGT00940000160294.b ENSGT00940000158744 ENSGT00510000047092 ENSGT00390000016992 ENSGT00530000063723.b ENSGT00940000154325.a ENSGT00390000013235 ENSGT00940000153467.a.b ENSGT00390000001289.b.a ENSGT00940000160861 Zebra finch MODERN SPECIES 26 NCBP2 (ENSTGUG00000007323) SLC7A3 (ENSTGUG00000007296) SNX12 (ENSTGUG00000007293) #11 FOXO4 (ENSTGUG00000026115) #12 ENSTGUG00000007251 ENSTGUG00000007242 MED12 (ENSTGUG00000007167) #15 NLGN3 (ENSTGUG00000007132) #16 GJB1 (ENSTGUG00000007127) #17 ENSTGUG00000023842 ZMYM3 (ENSTGUG00000007078) #18 NONO (ENSTGUG00000007048) #19 ITGB1BP2 (ENSTGUG00000007031) #20 ENSTGUG00000007027 ENSTGUG00000006988 #21 OGT (ENSTGUG00000006944) #22 BRCC3 (ENSTGUG00000020804) #36 CMC4 (ENSTGUG00000020118) FUNDC2 (ENSTGUG00000023139) F8 (ENSTGUG00000006867) MPP1 (ENSTGUG00000006812) DKC1 (ENSTGUG00000006781) ENSTGUG00000026062 TRMT2B (ENSTGUG00000006755) TMEM35A (ENSTGUG00000020280) CENPI (ENSTGUG00000006715) DRP2 (ENSTGUG00000006639) ENSTGUG00000006620 TAF7 (ENSTGUG00000006593) ENSTGUG00000020096 BTK (ENSTGUG00000015142) Common canary MODERN SPECIES 91 SNX12 (ENSSCAG00000016883) #11 FOXO4 (ENSSCAG00000016884) #12 ENSSCAG00000016885 ENSSCAG00000016886 MED12 (ENSSCAG00000016890) #15 NLGN3 (ENSSCAG00000016894) #16 ENSSCAG00000016896 GJB1 (ENSSCAG00000016898) #17 ENSSCAG00000016899 ZMYM3 (ENSSCAG00000016900) #18 NONO (ENSSCAG00000016903) #19 ENSSCAG00000016904 ITGB1BP2 (ENSSCAG00000016907) #20 ENSSCAG00000016916 ENSSCAG00000016921 #21 OGT (ENSSCAG00000016924) #22 ENSSCAG00000016926 BRCC3 (ENSSCAG00000016929) #36 CMC4 (ENSSCAG00000016941) ENSSCAG00000016943 FUNDC2 (ENSSCAG00000016946) F8 (ENSSCAG00000016948) MPP1 (ENSSCAG00000016950) DKC1 (ENSSCAG00000016963) TRMT2B (ENSSCAG00000016992) TMEM35A (ENSSCAG00000016995) CENPI (ENSSCAG00000016997) DRP2 (ENSSCAG00000017001) ENSSCAG00000017007 ENSSCAG00000017009 TAF7 (ENSSCAG00000017012) Medium ground finch MODERN SPECIES 17 ENSGFOG00000000613 SLC7A3 (ENSGFOG00000000616) SNX12 (ENSGFOG00000000626) #11 FOXO4 (ENSGFOG00000000630) #12 ENSGFOG00000000633 ENSGFOG00000000638 MED12 (ENSGFOG00000000724) #15 NLGN3 (ENSGFOG00000001668) #16 GJB1 (ENSGFOG00000001689) #17 ENSGFOG00000001697 ZMYM3 (ENSGFOG00000001706) #18 NONO (ENSGFOG00000001725) #19 ITGB1BP2 (ENSGFOG00000001737) #20 ENSGFOG00000001745 ENSGFOG00000001766 #21 OGT (ENSGFOG00000001872) #22 ENSGFOG00000001890 BRCC3 (ENSGFOG00000001899) #36 CMC4 (ENSGFOG00000001911) ENSGFOG00000001919 FUNDC2 (ENSGFOG00000001928) ENSGFOG00000001955 ENSGFOG00000002068 MPP1 (ENSGFOG00000002080) DKC1 (ENSGFOG00000002094) TRMT2B (ENSGFOG00000002176) TMEM35A (ENSGFOG00000002184) CENPI (ENSGFOG00000002192) DRP2 (ENSGFOG00000002215) ENSGFOG00000002243 TAF7 (ENSGFOG00000002250) Great tit MODERN SPECIES 24 DLG3 (ENSPMJG00000011462) #9 TEX11 (ENSPMJG00000011463) #10 ENSPMJG00000011464 SLC7A3 (ENSPMJG00000011465) SNX12 (ENSPMJG00000011466) #11 FOXO4 (ENSPMJG00000011467) #12 ENSPMJG00000011468 ENSPMJG00000011469 MED12 (ENSPMJG00000011470) #15 NLGN3 (ENSPMJG00000011471) #16 ZMYM3 (ENSPMJG00000011473) #18 NONO (ENSPMJG00000011475) #19 ITGB1BP2 (ENSPMJG00000011476) #20 ENSPMJG00000011477 ENSPMJG00000011478 #21 OGT (ENSPMJG00000011483) #22 BRCC3 (ENSPMJG00000011800) #36 ENSPMJG00000011801 CMC4 (ENSPMJG00000011802) FUNDC2 (ENSPMJG00000011803) F8 (ENSPMJG00000011804) MPP1 (ENSPMJG00000011805) DKC1 (ENSPMJG00000011806) TRMT2B (ENSPMJG00000012116) TMEM35A (ENSPMJG00000012121) CENPI (ENSPMJG00000012122) DRP2 (ENSPMJG00000012123) ENSPMJG00000012124 TAF7 (ENSPMJG00000012155) ENSPMJG00000012156 TIMM8A (ENSPMJG00000012157) African ostrich MODERN SPECIES 970 GDPD2 (ENSSCUG00000017051) #8 ENSSCUG00000017054 DLG3 (ENSSCUG00000017079) #9 TEX11 (ENSSCUG00000017098) #10 ENSSCUG00000017105 ENSSCUG00000017109 SNX12 (ENSSCUG00000017110) #11 FOXO4 (ENSSCUG00000017111) #12 ENSSCUG00000017113 MED12 (ENSSCUG00000017135) #15 NLGN3 (ENSSCUG00000017155) #16 ZMYM3 (ENSSCUG00000017164) #18 NONO (ENSSCUG00000017166) #19 ENSSCUG00000017169 ENSSCUG00000017173 #21 OGT (ENSSCUG00000017177) #22 ENSSCUG00000017179 BRCC3 (ENSSCUG00000017180) #36 ENSSCUG00000017181 CMC4 (ENSSCUG00000017182) FUNDC2 (ENSSCUG00000017183) F8 (ENSSCUG00000017184) MPP1 (ENSSCUG00000017188) Australian saltwater crocodile MODERN SPECIES 36 ENSCPRG00005003591 SLC7A3 (ENSCPRG00005003589) SNX12 (ENSCPRG00005003586) #11 FOXO4 (ENSCPRG00005003568) #12 ENSCPRG00005003518 ENSCPRG00005003481 MED12 (ENSCPRG00005001755) #15 NLGN3 (ENSCPRG00005001481) #16 GJB1 (ENSCPRG00005001475) #17 ZMYM3 (ENSCPRG00005001453) #18 ENSCPRG00005001447 NONO (ENSCPRG00005001433) #19 ENSCPRG00005001425 #20 ENSCPRG00005001422 ENSCPRG00005001070 #21 OGT (ENSCPRG00005000298) #22 FAAH2 (ENSCPRG00005000145) ENSCPRG00005000135 BRCC3 (ENSCPRG00005000130) #36 CMC4 (ENSCPRG00005000126) ENSCPRG00005000119 FUNDC2 (ENSCPRG00005000110) F8 (ENSCPRG00005000094) MPP1 (ENSCPRG00005000069) DKC1 (ENSCPRG00005010072) ENSCPRG00005010067 ENSCPRG00005010063 CENPI (ENSCPRG00005010055) DRP2 (ENSCPRG00005009820) ENSCPRG00005009768 TAF7 (ENSCPRG00005009721) Cryptodira ANCESTRAL SPECIES 29 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00950000183168.C ENSGT00510000049291 #13 ENSGT00940000164309 ENSGT00440000037505.b #15 ENSGT00940000159580.e #16 ENSGT01030000234513.B.a #17 ENSGT01050000244864.B.a ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000167446 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 Testudinoidea ANCESTRAL SPECIES 24 ENSGT00940000159334 #12 ENSGT00950000183168.C ENSGT00510000049291 #13 ENSGT00940000164309 ENSGT00440000037505.b #15 ENSGT00940000159580.f #16 ENSGT00940000159580.e #16 ENSGT01030000234513.B.a #17 ENSGT01050000244864.B.a ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000167446 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 Emydidae ANCESTRAL SPECIES 32 ENSGT00940000153609.a #11 ENSGT00940000159334 #12 ENSGT00950000183168.C ENSGT00510000049291 #13 ENSGT00940000164309 ENSGT00440000037505.b #15 ENSGT00940000159580.f #16 ENSGT00940000159580.e #16 ENSGT01030000234513.B.a #17 ENSGT01050000244864.B.a ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 Three-toed box turtle MODERN SPECIES 293 ITGB1BP2 (ENSTMTG00000003411) #20 ENSTMTG00000003615 ENSTMTG00000003640 #21 OGT (ENSTMTG00000003821) #22 painted turtle MODERN SPECIES 2374 SLC7A3 (ENSCPBG00000016709) SNX12 (ENSCPBG00000016706) #11 FOXO4 (ENSCPBG00000016704) #12 ENSCPBG00000016700 CXorf65 (ENSCPBG00000016697) #13 ENSCPBG00000016695 MED12 (ENSCPBG00000016686) #15 NLGN3 (ENSCPBG00000016680) #16 GJB1 (ENSCPBG00000016675) #17 ENSCPBG00000016673 ZMYM3 (ENSCPBG00000016663) #18 NONO (ENSCPBG00000016659) #19 ITGB1BP2 (ENSCPBG00000016652) #20 ENSCPBG00000016648 ENSCPBG00000016619 #21 OGT (ENSCPBG00000016577) #22 ENSCPBG00000016565 Testudinidae ANCESTRAL SPECIES 21 ENSGT00940000159334 #12 ENSGT00950000183168.C ENSGT00510000049291 #13 ENSGT00940000164309 ENSGT00440000037505.b #15 ENSGT00940000159580.f #16 ENSGT00940000159580.e #16 ENSGT01030000234513.B.a #17 ENSGT01050000244864.B.a ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000167446 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00440000040163 Abingdon island giant tortoise MODERN SPECIES 1783 OGT (ENSCABG00000005825) #22 Goode s thornscrub tortoise MODERN SPECIES 23 FOXO4 (ENSGEVG00005005157) #12 ENSGEVG00005005196 CXorf65 (ENSGEVG00005005217) #13 ENSGEVG00005005323 MED12 (ENSGEVG00005005530) #15 ENSGEVG00005005720 #16 ENSGEVG00005005748 #16 GJB1 (ENSGEVG00005005759) #17 ZMYM3 (ENSGEVG00005005804) #18 ENSGEVG00005005888 #19 ENSGEVG00005005941 ITGB1BP2 (ENSGEVG00005006004) #20 ENSGEVG00005006022 ENSGEVG00005006045 ENSGEVG00005006131 #21 OGT (ENSGEVG00005006921) #22 ENSGEVG00005006982 Chinese turtle MODERN SPECIES 1844 ENSPSIG00000002741 #21 OGT (ENSPSIG00000002730) #22 ENSPSIG00000002728 Lepidosauria ANCESTRAL SPECIES 138 ENSGT00950000183168.C ENSGT00510000049291 #13 ENSGT00940000164309 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000235750 ENSGT01030000234513.B.a #17 ENSGT01050000244864.B.a ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000167446 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 tuatara MODERN SPECIES 548 ITGB1BP2 (ENSSPUG00000003194) #20 ENSSPUG00000003186 ENSSPUG00000003119 #21 OGT (ENSSPUG00000003083) #22 ENSSPUG00000003059 Episquamata ANCESTRAL SPECIES 14 ENSGT00940000175781 ENSGT00950000183168.C ENSGT00510000049291 #13 ENSGT00940000164309 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000235750 ENSGT01030000234513.B.a #17 ENSGT01050000244864.B.a ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000167446 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.b #22 ENSGT00390000015700.b ENSGT00940000153941.a.b ENSGT00940000157209.ib.b ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00950000183031.B ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #31 ENSGT00940000157843 #30 Laterata ANCESTRAL SPECIES 48 ENSGT00390000006492 #10 ENSGT00940000159565 #9 ENSGT00950000183168.C ENSGT00510000049291 #13 ENSGT00940000164309 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000234513.B.a #17 ENSGT01050000244864.B.a ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000167446 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242.h #21 ENSGT00940000155085.b #22 ENSGT00940000153941.a.b ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00950000183031.B ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479.g.b ENSGT00940000160940 ENSGT00950000183118.A.c.b #31 ENSGT00940000157843 #30 ENSGT00390000005569 #28 ENSGT00940000165959 Argentine black and white tegu MODERN SPECIES 120 ENSSMRG00000003946 DLG3 (ENSSMRG00000003912) #9 ENSSMRG00000003904 CXorf65 (ENSSMRG00000003895) #13 ENSSMRG00000003890 MED12 (ENSSMRG00000003858) #15 NLGN3 (ENSSMRG00000003840) #16 GJB1 (ENSSMRG00000003836) #17 ENSSMRG00000003834 ZMYM3 (ENSSMRG00000003817) #18 NONO (ENSSMRG00000003807) #19 ENSSMRG00000003801 ITGB1BP2 (ENSSMRG00000003793) #20 ENSSMRG00000003788 ENSSMRG00000002757 #21 OGT (ENSSMRG00000002756) #22 ENSSMRG00000002752 GLOD5 (ENSSMRG00000002751) ENSSMRG00000002749 ENSSMRG00000002747 KLF8 (ENSSMRG00000002746) ENSSMRG00000002716 CLCN5 (ENSSMRG00000002704) ENSSMRG00000002702 ENSSMRG00000002698 ENSSMRG00000002142 SHROOM4 (ENSSMRG00000002127) BMP15 (ENSSMRG00000002122) PHKA1 (ENSSMRG00000002074) #31 HDAC8 (ENSSMRG00000002072) #30 RPS4X (ENSSMRG00000002071) #28 Amniota DUPLICATION Amniota ANCESTRAL SPECIES ENSGT00940000155085.a.a ##22 Sauria ANCESTRAL SPECIES ENSGT00940000155085.a.a ##22 Lepidosauria ANCESTRAL SPECIES ENSGT00940000155085.a.a ##22 Episquamata ANCESTRAL SPECIES ENSGT00940000155085.a.a ##22 Toxicofera ANCESTRAL SPECIES 17 ENSGT00940000159565 #9 ENSGT00940000175781 ENSGT00950000183168.C ENSGT00510000049291 #13 ENSGT00940000164309 ENSGT00440000037505.b #15 ENSGT00940000159580 #16 ENSGT01030000235750 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000167446 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.a.a ##22 ENSGT00940000157209.ib.b ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00950000183031.B ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #31 ENSGT00940000157843 #30 ENSGT00390000005569 #28 ENSGT00940000165959 Elapidae ANCESTRAL SPECIES 14 ENSGT00390000003197 ENSGT00940000159565 #9 ENSGT00940000175781 ENSGT00950000183168.C ENSGT00510000049291 #13 ENSGT00940000164309 ENSGT00440000037505.b #15 ENSGT00940000159580.g #16 ENSGT01030000235750 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.a.a ##22 ENSGT00940000155085.a.b ##22 ENSGT00940000157209.ib.b ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00950000183031.B ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #31 ENSGT00940000157843 #30 ENSGT00390000005569 #28 Elapidae_a ANCESTRAL SPECIES 46 ENSGT00390000003197 ENSGT00940000159565 #9 ENSGT00940000175781 ENSGT00950000183168.C ENSGT00510000049291 #13 ENSGT00940000164309 ENSGT00440000037505.b #15 ENSGT00940000159580.g #16 ENSGT01030000235750 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.a.a ##22 ENSGT00940000155085.a.b ##22 ENSGT00940000157209.ib.b ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00950000183031.B ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #31 ENSGT00940000157843 #30 ENSGT00390000005569 #28 Acanthophiinae ANCESTRAL SPECIES 45 ENSGT00940000154651 ENSGT00390000003197 ENSGT00940000159565 #9 ENSGT00950000183168.C ENSGT00510000049291 #13 ENSGT00940000164309 ENSGT00440000037505.b #15 ENSGT00940000159580.g #16 ENSGT01030000235750 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.a.a ##22 ENSGT00940000155085.a.b ##22 ENSGT00940000157209.ib.b ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00950000183031.B ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #31 ENSGT00940000157843 #30 ENSGT00390000005569 #28 Mainland tiger snake MODERN SPECIES 222 SNX12 (ENSNSUG00000012218) #11 SLC7A3 (ENSNSUG00000012219) ENSNSUG00000012220 DLG3 (ENSNSUG00000012221) #9 ENSNSUG00000012222 CXorf65 (ENSNSUG00000012223) #13 ENSNSUG00000012224 MED12 (ENSNSUG00000012225) #15 NLGN3 (ENSNSUG00000013132) #16 ENSNSUG00000013154 GJB1 (ENSNSUG00000013155) #17 ZMYM3 (ENSNSUG00000013162) #18 NONO (ENSNSUG00000014170) #19 ENSNSUG00000014171 #20 ENSNSUG00000014187 #21 ENSNSUG00000014317 ##22 ENSNSUG00000014318 ##22 ENSNSUG00000014322 ENSNSUG00000014334 ENSNSUG00000014335 KLF8 (ENSNSUG00000014336) ENSNSUG00000014337 CLCN5 (ENSNSUG00000014339) ENSNSUG00000014340 ENSNSUG00000014341 ENSNSUG00000014342 SHROOM4 (ENSNSUG00000014343) BMP15 (ENSNSUG00000014344) PHKA1 (ENSNSUG00000014345) #31 HDAC8 (ENSNSUG00000018232) #30 RPS4X (ENSNSUG00000018233) #28 Eastern brown snake MODERN SPECIES 86 ENSPTXG00000010066 DLG3 (ENSPTXG00000008755) #9 ENSPTXG00000008749 CXorf65 (ENSPTXG00000008748) #13 ENSPTXG00000008744 MED12 (ENSPTXG00000008739) #15 NLGN3 (ENSPTXG00000008720) #16 GJB1 (ENSPTXG00000008718) #17 ENSPTXG00000008717 ZMYM3 (ENSPTXG00000008339) #18 ENSPTXG00000008336 #19 ENSPTXG00000008335 #19 ENSPTXG00000008334 #20 ENSPTXG00000008333 ENSPTXG00000007956 #21 ENSPTXG00000007953 ##22 ENSPTXG00000007951 ##22 ENSPTXG00000007946 ENSPTXG00000007943 ENSPTXG00000007939 KLF8 (ENSPTXG00000007937) ENSPTXG00000007935 CLCN5 (ENSPTXG00000007932) ENSPTXG00000007930 ENSPTXG00000007929 ENSPTXG00000007813 ENSPTXG00000007802 ENSPTXG00000007801 BMP15 (ENSPTXG00000007799) ENSPTXG00000007797 #31 HDAC8 (ENSPTXG00000007792) #30 Indian cobra MODERN SPECIES 13 ENSNNAG00000010227 ENSNNAG00000010251 #9 ENSNNAG00000010324 #9 ENSNNAG00000010504 CXorf65 (ENSNNAG00000010531) #13 ENSNNAG00000010577 MED12 (ENSNNAG00000010622) #15 ENSNNAG00000010798 #16 NLGN3 (ENSNNAG00000010842) #16 ENSNNAG00000010862 GJB1 (ENSNNAG00000010888) #17 ZMYM3 (ENSNNAG00000010909) #18 NONO (ENSNNAG00000011085) #19 ITGB1BP2 (ENSNNAG00000011187) #20 ENSNNAG00000011205 ENSNNAG00000012177 ##22 ENSNNAG00000012200 ##22 ENSNNAG00000012259 ENSNNAG00000012278 ENSNNAG00000012316 ENSNNAG00000012329 KLF8 (ENSNNAG00000012347) ENSNNAG00000012368 CLCN5 (ENSNNAG00000012416) ENSNNAG00000012607 ENSNNAG00000012638 ENSNNAG00000012716 SHROOM4 (ENSNNAG00000013045) BMP15 (ENSNNAG00000013080) PHKA1 (ENSNNAG00000013170) #31 HDAC8 (ENSNNAG00000013867) #30 Lizard MODERN SPECIES 1206 CXorf65 (ENSACAG00000035339) #13 ENSACAG00000015455 MED12 (ENSACAG00000015260) #15 nlgn3 (ENSACAG00000015196) #16 GJB1 (ENSACAG00000015186) #17 ENSACAG00000036440 ENSACAG00000044444 ZMYM3 (ENSACAG00000015100) #18 NONO (ENSACAG00000015026) #19 ENSACAG00000014973 ENSACAG00000034655 #20 ENSACAG00000035977 ENSACAG00000014967 #20 ENSACAG00000014965 ENSACAG00000014806 #21 OGT (ENSACAG00000014687) ##22 Laterata ANCESTRAL SPECIES ENSGT00940000155085.a.a ##22 Common wall lizard MODERN SPECIES 419 PHKA1 (ENSPMRG00000021839) #31 ENSPMRG00000021804 ENSPMRG00000021799 FRMPD3 (ENSPMRG00000021786) ENSPMRG00000021779 ENSPMRG00000021776 PLP1 (ENSPMRG00000021768) ENSPMRG00000021758 CLCN5 (ENSPMRG00000021753) ENSPMRG00000021732 KLF8 (ENSPMRG00000021722) ENSPMRG00000021715 ENSPMRG00000021712 ENSPMRG00000021709 ENSPMRG00000021703 OGT (ENSPMRG00000021511) ##22 ENSPMRG00000021444 ENSPMRG00000021440 ENSPMRG00000021386 ENSPMRG00000021370 FHL1 (ENSPMRG00000021367) ENSPMRG00000021366 MOSPD1 (ENSPMRG00000021359) ENSPMRG00000021356 PABIR2 (ENSPMRG00000021327) ENSPMRG00000021310 INTS6L (ENSPMRG00000021282) MMGT1 (ENSPMRG00000021271) SLC9A6 (ENSPMRG00000021264) ENSPMRG00000021256 ENSPMRG00000021253 Amniota ANCESTRAL SPECIES ENSGT00940000155085.a.b ##22 Mammalia ANCESTRAL SPECIES ENSGT00940000155085.a.b ##22 Theria ANCESTRAL SPECIES ENSGT00940000155085.a.b ##22 Eutheria ANCESTRAL SPECIES ENSGT00940000155085.a.b ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00940000155085.a.b ##22 Laurasiatheria ANCESTRAL SPECIES ENSGT00940000155085.a.b ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00940000155085.a.b ##22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00940000155085.a.b ##22 Carnivora ANCESTRAL SPECIES ENSGT00940000155085.a.b ##22 Caniformia ANCESTRAL SPECIES ENSGT00940000155085.a.b ##22 Caniformia_b ANCESTRAL SPECIES ENSGT00940000155085.a.b ##22 Ursidae ANCESTRAL SPECIES ENSGT00940000155085.a.b ##22 Giant Panda DUPLICATION Giant Panda DUPLICATION Giant Panda MODERN SPECIES 818 ENSAMEG00000028207 ##22 Giant Panda MODERN SPECIES 969 ENSAMEG00000027105 ##22 Giant Panda MODERN SPECIES 1689 ENSAMEG00000027457 ##22 Sauria ANCESTRAL SPECIES ENSGT00940000155085.a.b ##22 Lepidosauria ANCESTRAL SPECIES ENSGT00940000155085.a.b ##22 Episquamata ANCESTRAL SPECIES ENSGT00940000155085.a.b ##22 Toxicofera ANCESTRAL SPECIES ENSGT00940000155085.a.b ##22 Elapidae ANCESTRAL SPECIES 14 ENSGT00940000159565 #9 ENSGT00940000175781 ENSGT00950000183168.C ENSGT00510000049291 #13 ENSGT00940000164309 ENSGT00440000037505.b #15 ENSGT00940000159580.g #16 ENSGT01030000235750 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.a.a ##22 ENSGT00940000155085.a.b ##22 ENSGT00940000157209.ib.b ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00950000183031.B ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #31 ENSGT00940000157843 #30 ENSGT00390000005569 #28 ENSGT00940000165959 Indian cobra MODERN SPECIES 13 ENSNNAG00000010251 #9 ENSNNAG00000010324 #9 ENSNNAG00000010504 CXorf65 (ENSNNAG00000010531) #13 ENSNNAG00000010577 MED12 (ENSNNAG00000010622) #15 ENSNNAG00000010798 #16 NLGN3 (ENSNNAG00000010842) #16 ENSNNAG00000010862 GJB1 (ENSNNAG00000010888) #17 ZMYM3 (ENSNNAG00000010909) #18 NONO (ENSNNAG00000011085) #19 ITGB1BP2 (ENSNNAG00000011187) #20 ENSNNAG00000011205 ENSNNAG00000012177 ##22 ENSNNAG00000012200 ##22 ENSNNAG00000012259 ENSNNAG00000012278 ENSNNAG00000012316 ENSNNAG00000012329 KLF8 (ENSNNAG00000012347) ENSNNAG00000012368 CLCN5 (ENSNNAG00000012416) ENSNNAG00000012607 ENSNNAG00000012638 ENSNNAG00000012716 SHROOM4 (ENSNNAG00000013045) BMP15 (ENSNNAG00000013080) PHKA1 (ENSNNAG00000013170) #31 HDAC8 (ENSNNAG00000013867) #30 RPS4X (ENSNNAG00000014136) #28 Elapidae_a ANCESTRAL SPECIES 46 ENSGT00940000159565 #9 ENSGT00940000175781 ENSGT00950000183168.C ENSGT00510000049291 #13 ENSGT00940000164309 ENSGT00440000037505.b #15 ENSGT00940000159580.g #16 ENSGT01030000235750 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.a.a ##22 ENSGT00940000155085.a.b ##22 ENSGT00940000157209.ib.b ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00950000183031.B ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #31 ENSGT00940000157843 #30 ENSGT00390000005569 #28 ENSGT00940000165959 Blue-lipped sea krait MODERN SPECIES 3546 ENSLLTG00000002983 ENSLLTG00000002990 GJB1 (ENSLLTG00000002995) #17 ZMYM3 (ENSLLTG00000002999) #18 NONO (ENSLLTG00000003017) #19 ITGB1BP2 (ENSLLTG00000003036) #20 ENSLLTG00000003046 ENSLLTG00000003064 #21 OGT (ENSLLTG00000003540) ##22 Acanthophiinae ANCESTRAL SPECIES 45 ENSGT00390000003197 ENSGT00940000159565 #9 ENSGT00950000183168.C ENSGT00510000049291 #13 ENSGT00940000164309 ENSGT00440000037505.b #15 ENSGT00940000159580.g #16 ENSGT01030000235750 ENSGT01030000234513.B.a #17 ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000159429 #20 ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085.a.a ##22 ENSGT00940000155085.a.b ##22 ENSGT00940000157209.ib.b ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00950000183031.B ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00940000160459 ENSGT00940000164406 ENSGT00940000159479 ENSGT00940000160940 ENSGT00950000183118.A.c.b #31 ENSGT00940000157843 #30 ENSGT00390000005569 #28 ENSGT00940000165959 Mainland tiger snake MODERN SPECIES 222 SLC7A3 (ENSNSUG00000012219) ENSNSUG00000012220 DLG3 (ENSNSUG00000012221) #9 ENSNSUG00000012222 CXorf65 (ENSNSUG00000012223) #13 ENSNSUG00000012224 MED12 (ENSNSUG00000012225) #15 NLGN3 (ENSNSUG00000013132) #16 ENSNSUG00000013154 GJB1 (ENSNSUG00000013155) #17 ZMYM3 (ENSNSUG00000013162) #18 NONO (ENSNSUG00000014170) #19 ENSNSUG00000014171 #20 ENSNSUG00000014187 #21 ENSNSUG00000014317 ##22 ENSNSUG00000014318 ##22 ENSNSUG00000014322 ENSNSUG00000014334 ENSNSUG00000014335 KLF8 (ENSNSUG00000014336) ENSNSUG00000014337 CLCN5 (ENSNSUG00000014339) ENSNSUG00000014340 ENSNSUG00000014341 ENSNSUG00000014342 SHROOM4 (ENSNSUG00000014343) BMP15 (ENSNSUG00000014344) PHKA1 (ENSNSUG00000014345) #31 HDAC8 (ENSNSUG00000018232) #30 RPS4X (ENSNSUG00000018233) #28 ENSNSUG00000018234 Eastern brown snake MODERN SPECIES 86 DLG3 (ENSPTXG00000008755) #9 ENSPTXG00000008749 CXorf65 (ENSPTXG00000008748) #13 ENSPTXG00000008744 MED12 (ENSPTXG00000008739) #15 NLGN3 (ENSPTXG00000008720) #16 GJB1 (ENSPTXG00000008718) #17 ENSPTXG00000008717 ZMYM3 (ENSPTXG00000008339) #18 ENSPTXG00000008336 #19 ENSPTXG00000008335 #19 ENSPTXG00000008334 #20 ENSPTXG00000008333 ENSPTXG00000007956 #21 ENSPTXG00000007953 ##22 ENSPTXG00000007951 ##22 ENSPTXG00000007946 ENSPTXG00000007943 ENSPTXG00000007939 KLF8 (ENSPTXG00000007937) ENSPTXG00000007935 CLCN5 (ENSPTXG00000007932) ENSPTXG00000007930 ENSPTXG00000007929 ENSPTXG00000007813 ENSPTXG00000007802 ENSPTXG00000007801 BMP15 (ENSPTXG00000007799) ENSPTXG00000007797 #31 HDAC8 (ENSPTXG00000007792) #30 RPS4X (ENSPTXG00000007787) #28 Anura ANCESTRAL SPECIES 264 ENSGT01050000244864.B.a ENSGT00940000160693 #18 ENSGT00940000154442 #19 ENSGT00940000167446 ENSGT00940000159429 #20 ENSGT00940000163553.d ENSGT00940000155128.a.a.b ENSGT00940000163331 ENSGT00940000155242 #21 ENSGT00940000155085 #22 ENSGT00440000040163 Frog MODERN SPECIES 8 acaa1 (ENSXETG00000020891) #16 XB5730473 [provisional] (ENSXETG00000037921) med12 (ENSXETG00000031593) #15 XB5730431 [provisional] (ENSXETG00000032413) ENSXETG00000034503 gjb1 (ENSXETG00000026283) #17 MGC69466 (ENSXETG00000026282) sia2 (ENSXETG00000020876) #18 nono (ENSXETG00000020868) #19 ENSXETG00000020872 itgb1bp2 (ENSXETG00000020870) #20 XB5873314 [provisional:rab32] (ENSXETG00000020869) ENSXETG00000036137 rhog2 (ENSXETG00000047223) taf1 (ENSXETG00000023137) #21 ogt (ENSXETG00000023153) #22 gcna (ENSXETG00000038920) igbp1 (ENSXETG00000023188) dgat2l6 (ENSXETG00000023190) p2ry4 (ENSXETG00000023193) ENSXETG00000045249 arr3 (ENSXETG00000023204) rab41 (ENSXETG00000030938) ENSXETG00000047284 ENSXETG00000023220 wnt11b (ENSXETG00000023227) wnt11b-1 (ENSXETG00000038741) lrrc32.2 (ENSXETG00000006576) eda (ENSXETG00000039649) nalf2 (ENSXETG00000033673) ENSXETG00000045876 Leishan spiny toad MODERN SPECIES 12 TEX11 (ENSLLEG00000020271) #10 DLG3 (ENSLLEG00000021325) #9 ENSLLEG00000022504 ENSLLEG00000022536 ENSLLEG00000022552 ZMYM3 (ENSLLEG00000022609) #18 NONO (ENSLLEG00000023526) #19 ENSLLEG00000023617 ITGB1BP2 (ENSLLEG00000023671) #20 ENSLLEG00000023764 ENSLLEG00000023849 ENSLLEG00000023925 ENSLLEG00000023949 ENSLLEG00000024056 #21 ENSLLEG00000026812 OGT (ENSLLEG00000026875) #22 ENSLLEG00000027514 FGD1 (ENSLLEG00000027565) GNL3L (ENSLLEG00000027626) ENSLLEG00000027757 ITIH6 (ENSLLEG00000027893) ENSLLEG00000028135 ENSLLEG00000028188 ENSLLEG00000028216 ENSLLEG00000028221 ENSLLEG00000028301 ENSLLEG00000029077 ENSLLEG00000029229 ENSLLEG00000029243 ENSLLEG00000029266 ENSLLEG00000029294 Coelacanth MODERN SPECIES 1179 CHID1 (ENSLACG00000001440) th (ENSLACG00000006317) ENSLACG00000008117 CXorf65 (ENSLACG00000022380) #13 ENSLACG00000009225 FOXO4 (ENSLACG00000009595) #12 SNX12 (ENSLACG00000010058) #11 ENSLACG00000010304 zgc:113208 (ENSLACG00000010593) ITGB1BP2 (ENSLACG00000010709) #20 ENSLACG00000010906 rhogc (ENSLACG00000011841) taf1 (ENSLACG00000011936) #21 OGT (ENSLACG00000012695) #22 ENSLACG00000013173 Actinopterygii ANCESTRAL SPECIES 166 ENSGT00940000161713 ENSGT00950000182803.B.d.a ENSGT00950000183035.a.a ENSGT01030000234752 ENSGT00390000001775.A ENSGT00390000003706.a.b.a ENSGT00390000015364.a.b.a ENSGT00390000015364.a.b.b ENSGT00390000015700.b ENSGT00940000153941.a.b ENSGT00940000166719 ENSGT00940000163673 ENSGT00940000155242 #21 ENSGT00940000163331 ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d ENSGT00940000167495 ENSGT00940000159580 #16 Neopterygii ANCESTRAL SPECIES 156 ENSGT00390000015700.b ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT00510000046908.b ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a ENSGT00940000161713 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000155242 #21 ENSGT00940000163331 ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d ENSGT00940000167495 ENSGT00940000159580 #16 Osteoglossocephalai ANCESTRAL SPECIES 57 ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT00510000046908.b ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a ENSGT00940000161713 ENSGT00940000176232 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000155242 #21 ENSGT00940000163331.b ENSGT00390000006915.c.d.b ENSGT00940000153251.b.a ENSGT00940000156123.b ENSGT00710000106792 Clupeocephala ANCESTRAL SPECIES 187 ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT00510000046908.b ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00940000176232 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 Euteleosteomorpha ANCESTRAL SPECIES 168 ENSGT00390000015700.b ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00940000176232 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00390000011709.gb ENSGT00940000159580 #16 Protacanthopterygii ANCESTRAL SPECIES 62 ENSGT00390000014513 ENSGT00970000194185.B ENSGT00980000202377 ENSGT00940000153902.b.b ENSGT00940000154103.b ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00940000176232 ENSGT00390000017860.a.a ENSGT00940000159611.g ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a.b ENSGT00940000178948 ENSGT00940000156386 ENSGT00940000160067 ENSGT00940000156071.a ENSGT00940000156385.a Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 276 ENSGT00950000183035.a.a.bb.b ENSGT00950000182803.B.d.a.n.s.b.b ENSGT00940000161713.l ENSGT00390000017860.a.a.q.b ENSGT00940000159611.g.a.b ENSGT00940000163673.d ENSGT00940000163331.a.b.e ENSGT00940000155128.a.a.b.c.a ENSGT00940000155085.c #22 ENSGT00440000040163.e ENSGT00940000157209.f ENSGT00940000158229.g ENSGT00530000063872.A.c ENSGT00940000158983 ENSGT00940000160481.h ENSGT00390000006915.c.d.a.e ENSGT00940000167495.d ENSGT00940000159580 #16 ENSGT00940000156123.a.b ENSGT00940000178948.a ENSGT00940000156386.n ENSGT00940000155875.s.a.b ENSGT00940000156071.a.h ENSGT00940000156385.a.f Huchen MODERN SPECIES 3252 OGT (ENSHHUG00000000672) #22 gcna (ENSHHUG00000001665) ENSHHUG00000001673 nsdhl (ENSHHUG00000001747) ENSHHUG00000001762 Salmoninae_a ANCESTRAL SPECIES 41 ENSGT00950000182972.a.a.a.a.a.e.e ENSGT00940000160128.bb.a ENSGT00940000155516.v.b ENSGT01090000260082.d.a.a.c.g ENSGT00390000018389.e.b ENSGT00940000153902.b.b.c.b ENSGT00940000154103.b.e.b ENSGT00950000183035.a.a.bb.b ENSGT00950000182803.B.d.a.n.s.b.b ENSGT00940000161713.l ENSGT00390000017860.a.a.q.b ENSGT00940000159611.g.a.b ENSGT00940000163673.d ENSGT00940000163331.a.b.e ENSGT00940000155128.a.a.b.c.a ENSGT00940000155085.c #22 ENSGT00440000040163.e ENSGT00940000157209.f ENSGT00940000158229.g ENSGT00530000063872.A.c ENSGT00940000158983 ENSGT00940000160481.h ENSGT00390000006915.c.d.a.f.a ENSGT00940000178948.b ENSGT00940000156386.m ENSGT00940000155875.s.a.a ENSGT00940000156071.a.g ENSGT00940000156385.a.e ENSGT00390000012721.a.g.b.d ENSGT00390000014316.c.b.e.b ENSGT00940000156067.g.b.e.a Oncorhynchus ANCESTRAL SPECIES 34 ENSGT00950000182972.a.a.a.a.a.e.e ENSGT00940000160128.bb.a ENSGT01010000223808.a.a.a ENSGT00940000155516.v.b ENSGT01090000260082.d.a.a.c.g ENSGT00390000018389.f ENSGT00980000202377 ENSGT00390000018389.e.b ENSGT00940000153902.b.b.d ENSGT00940000154103.b.e.b ENSGT00940000158211.g.a.b ENSGT00940000159611.g.b ENSGT00940000163673.c.b.a ENSGT00940000163331.a.b.e ENSGT00940000155128.a.a.b.c.a ENSGT00940000155085.c #22 ENSGT00440000040163.e ENSGT00940000157209.f ENSGT00940000158229.g ENSGT00530000063872.A.c ENSGT00940000158983 ENSGT00940000160481.h ENSGT00390000006915.c.d.a.e ENSGT00940000167495.d ENSGT00940000159580.r.a #16 ENSGT00940000178948.b.b ENSGT00940000156386.m ENSGT00940000155875.s.a.a ENSGT00940000156071.a.g ENSGT00940000156385.a.e ENSGT01030000237240 Oncorhynchus_a ANCESTRAL SPECIES 391 ENSGT00940000155128.a.a.b.c.a ENSGT00940000155085.c #22 ENSGT00940000157209.f ENSGT00940000158229.g Coho salmon DUPLICATION Coho salmon DUPLICATION Coho salmon MODERN SPECIES 10 ENSOKIG00005049065 asb12b (ENSOKIG00005049069) ENSOKIG00005049073 ENSOKIG00005049076 ENSOKIG00005049077 FRMPD3 (ENSOKIG00005049078) prps1b (ENSOKIG00005049087) SLC25A53 (ENSOKIG00005049097) tmsb1 (ENSOKIG00005049100) zgc:66447 (ENSOKIG00005049101) znf711 (ENSOKIG00005049105) kctd12b (ENSOKIG00005049107) ENSOKIG00005049110 ENSOKIG00005049112 ENSOKIG00005049113 OGT (ENSOKIG00005049129) #22 ENSOKIG00005049296 ENSOKIG00005049299 #22 ENSOKIG00005049307 ENSOKIG00005049313 gcna (ENSOKIG00005049317) CETN1 (ENSOKIG00005049328) nsdhl (ENSOKIG00005049336) ENSOKIG00005005914 RAB9B (ENSOKIG00005005924) plp1a (ENSOKIG00005005942) pcdh20 (ENSOKIG00005005965) nlgn3a (ENSOKIG00005006011) #16 ENSOKIG00005006257 ENSOKIG00005006270 ENSOKIG00005006298 Coho salmon MODERN SPECIES 10 ENSOKIG00005049073 ENSOKIG00005049076 ENSOKIG00005049077 FRMPD3 (ENSOKIG00005049078) prps1b (ENSOKIG00005049087) SLC25A53 (ENSOKIG00005049097) tmsb1 (ENSOKIG00005049100) zgc:66447 (ENSOKIG00005049101) znf711 (ENSOKIG00005049105) kctd12b (ENSOKIG00005049107) ENSOKIG00005049110 ENSOKIG00005049112 ENSOKIG00005049113 OGT (ENSOKIG00005049129) #22 ENSOKIG00005049296 ENSOKIG00005049299 #22 ENSOKIG00005049307 ENSOKIG00005049313 gcna (ENSOKIG00005049317) CETN1 (ENSOKIG00005049328) nsdhl (ENSOKIG00005049336) ENSOKIG00005005914 RAB9B (ENSOKIG00005005924) plp1a (ENSOKIG00005005942) pcdh20 (ENSOKIG00005005965) nlgn3a (ENSOKIG00005006011) #16 ENSOKIG00005006257 ENSOKIG00005006270 ENSOKIG00005006298 ENSOKIG00005006367 ENSOKIG00005006387 Coho salmon MODERN SPECIES 6 ENSOKIG00005037703 ENSOKIG00005037614 ZC4H2 (ENSOKIG00005037578) ENSOKIG00005037481 ASB12 (ENSOKIG00005037440) ENSOKIG00005036468 ENSOKIG00005036379 prps1b (ENSOKIG00005036228) ENSOKIG00005036217 ENSOKIG00005036206 ENSOKIG00005036199 znf711 (ENSOKIG00005036191) ENSOKIG00005036183 ENSOKIG00005036176 ENSOKIG00005036159 OGT (ENSOKIG00005035274) #22 CETN1 (ENSOKIG00005035182) gcna (ENSOKIG00005035132) ENSOKIG00005035093 fut11 (ENSOKIG00005035034) RAB9B (ENSOKIG00005034999) ENSOKIG00005034988 plp1a (ENSOKIG00005034940) ENSOKIG00005034888 ENSOKIG00005034878 nlgn3a (ENSOKIG00005034853) #16 ENSOKIG00005034842 ENSOKIG00005034639 ENSOKIG00005034615 ENSOKIG00005034608 ENSOKIG00005034586 Rainbow trout MODERN SPECIES 23 ENSOMYG00000055789 ENSOMYG00000043399 ENSOMYG00000059974 ENSOMYG00000068182 ENSOMYG00000066060 ENSOMYG00000042633 prps1b (ENSOMYG00000048267) ENSOMYG00000042675 tmsb1 (ENSOMYG00000042679) zgc:66447 (ENSOMYG00000042683) znf711 (ENSOMYG00000076981) ENSOMYG00000057846 ENSOMYG00000042695 ENSOMYG00000063873 ENSOMYG00000060998 ENSOMYG00000042784 #22 gcna (ENSOMYG00000043327) ENSOMYG00000060901 ENSOMYG00000043333 nsdhl (ENSOMYG00000043339) ENSOMYG00000050473 fut11 (ENSOMYG00000043348) ENSOMYG00000048155 plp1a (ENSOMYG00000043374) ENSOMYG00000043389 nlgn3a (ENSOMYG00000048600) #16 ENSOMYG00000072202 ENSOMYG00000042618 kif3a (ENSOMYG00000042606) ENSOMYG00000042598 kctd16a (ENSOMYG00000042592) Salmo ANCESTRAL SPECIES 47 ENSGT00940000160128.bb.a ENSGT00940000155516.v.b ENSGT01090000260082.d.a.a.c.g ENSGT00390000018389.e.b ENSGT00940000153902.b.b.c.b ENSGT00940000154103.b.e.b ENSGT00950000183035.a.a.bb.b ENSGT00950000182803.B.d.a.n.s.b.b ENSGT00940000161713.l ENSGT00940000176232.f.a ENSGT00390000017860.a.a.q.b ENSGT00940000159611.g.a.b ENSGT00940000163673.d ENSGT00940000163331.a.b.e ENSGT00940000155128.a.a.b.c.a ENSGT00940000155085.c #22 ENSGT00440000040163.e ENSGT00940000157209.f ENSGT00940000158229.g ENSGT00530000063872.A.c ENSGT00940000158983 ENSGT00940000160481.h ENSGT00390000006915.c.d.a.e ENSGT00940000159580.r.a #16 ENSGT00940000156123.a.b ENSGT00940000178948.b River trout MODERN SPECIES 4 ENSSTUG00000006008 ENSSTUG00000006025 zc4h2 (ENSSTUG00000006520) asb12b (ENSSTUG00000006543) ENSSTUG00000006559 ENSSTUG00000006701 FRMPD3 (ENSSTUG00000006720) ENSSTUG00000006778 prps1b (ENSSTUG00000006794) SLC25A53 (ENSSTUG00000006834) tmsb1 (ENSSTUG00000006838) zgc:66447 (ENSSTUG00000006841) znf711 (ENSSTUG00000006874) kctd12b (ENSSTUG00000006899) ENSSTUG00000006904 OGT (ENSSTUG00000006941) #22 gcna (ENSSTUG00000008487) ENSSTUG00000008511 nsdhl (ENSSTUG00000008522) ENSSTUG00000008546 fut11 (ENSSTUG00000008630) RAB9B (ENSSTUG00000008655) plp1a (ENSSTUG00000008673) ENSSTUG00000008719 ENSSTUG00000009941 kif3a (ENSSTUG00000009981) ENSSTUG00000011262 ENSSTUG00000011269 ENSSTUG00000011278 kctd16a (ENSSTUG00000011280) ENSSTUG00000011294 Atlantic salmon MODERN SPECIES 28 ENSSSAG00000088598 ENSSSAG00000120857 ENSSSAG00000119299 ENSSSAG00000055814 ENSSSAG00000057714 ENSSSAG00000060429 ENSSSAG00000111376 ENSSSAG00000068111 prps1b (ENSSSAG00000102063) tmsb1 (ENSSSAG00000068011) zgc:66447 (ENSSSAG00000068008) znf711 (ENSSSAG00000112879) ENSSSAG00000098806 ENSSSAG00000116811 ENSSSAG00000067984 ENSSSAG00000061261 #22 ENSSSAG00000060848 nsdhl (ENSSSAG00000060663) ENSSSAG00000099761 ENSSSAG00000060807 fut11 (ENSSSAG00000060617) ENSSSAG00000099978 ENSSSAG00000105108 ENSSSAG00000060908 MYPR (ENSSSAG00000060503) ENSSSAG00000108682 ENSSSAG00000112168 nlgn3a (ENSSSAG00000116247) #16 ENSSSAG00000055849 ENSSSAG00000116045 ENSSSAG00000042040 Salmoninae ANCESTRAL SPECIES 143 ENSGT00940000154103.b.e.b ENSGT00390000018389.f ENSGT00980000202377 ENSGT00940000153902.b.b.c.a ENSGT00940000154103.b.e.a ENSGT01030000234752 ENSGT00950000183035.a.a.bb.a ENSGT00950000182803.B.d.a.n.s.b.a ENSGT00940000161713.k ENSGT00940000176232 ENSGT00390000017860.a.a.q.a ENSGT00940000159611.g.a.a ENSGT00940000163673.c ENSGT00940000163331.a.b.f ENSGT00940000155128.a.a.b.c.b ENSGT00940000155085.d #22 ENSGT00940000166392.d ENSGT00970000194185.B.a ENSGT00970000194185.B.b ENSGT00440000040163.f ENSGT00940000157209.e ENSGT00940000158229.h ENSGT00530000063872.A.d ENSGT00940000160481.g ENSGT00390000006915.c.d.a.f ENSGT00940000167495.c Salmoninae_a ANCESTRAL SPECIES 18 ENSGT00390000014513 ENSGT00980000202377 ENSGT00940000153902.b.b.d ENSGT00940000153902.b.b.c.a ENSGT00940000154103.b.e.a ENSGT01030000234752 ENSGT00950000183035.a.a.bb.a ENSGT00950000182803.B.d.a.n.s.b.a ENSGT00940000161713.k ENSGT00940000176232 ENSGT00390000017860.a.a.q.a ENSGT00940000159611.g.a.a ENSGT00940000163673.c ENSGT00940000163331.a.b.f ENSGT00940000155128.a.a.b.c.b ENSGT00940000155085.d #22 ENSGT00940000166392.d ENSGT00970000194185.B.a ENSGT00970000194185.B.b ENSGT00440000040163.f ENSGT00940000157209.e ENSGT00940000158229.h ENSGT00530000063872.A.d ENSGT00940000160481.g ENSGT00390000006915.c.d.a.f.b ENSGT00940000167495.c ENSGT00940000159580.r.b #16 ENSGT00940000156123.a.b ENSGT00940000178948.a ENSGT00940000156386.n ENSGT00940000155875.s.a.b Salmo ANCESTRAL SPECIES 24 ENSGT00390000014513 ENSGT00980000202377 ENSGT00940000153902.b.b.c.a ENSGT00940000154103.b.e.a ENSGT01030000234752 ENSGT00950000183035.a.a.bb.a ENSGT00950000182803.B.d.a.n.s.b.a ENSGT00940000161713.k ENSGT00940000176232.f.b ENSGT00390000017860.a.a.q.a ENSGT00940000159611.g.a.a ENSGT01090000260251.f.a ENSGT00940000163673.c ENSGT00940000163331.a.b.f ENSGT00940000155128.a.a.b.c.b ENSGT00940000155085.d #22 ENSGT00940000166392.d ENSGT00970000194185.B.a ENSGT00970000194185.B.b ENSGT00440000040163.f ENSGT00940000157209.e ENSGT00940000158229.h ENSGT00530000063872.A.d ENSGT00940000160481.g ENSGT00390000006915.c.d.a.f.b ENSGT00940000167495.c ENSGT00940000159580.r.b #16 ENSGT00940000156123.a.a ENSGT00940000178948.a ENSGT00940000156386.n ENSGT00940000155875.s.a.b River trout MODERN SPECIES 22 ENSSTUG00000000116 asb12b (ENSSTUG00000000113) ENSSTUG00000000102 ENSSTUG00000000095 ENSSTUG00000014278 FRMPD3 (ENSSTUG00000014264) prps1b (ENSSTUG00000014239) SLC25A53 (ENSSTUG00000014236) ENSSTUG00000014233 zgc:66447 (ENSSTUG00000014229) znf711 (ENSSTUG00000014213) ENSSTUG00000014207 kctd12b (ENSSTUG00000014204) ENSSTUG00000014198 ENSSTUG00000014191 OGT (ENSSTUG00000013453) #22 ENSSTUG00000013401 ENSSTUG00000013389 ENSSTUG00000013387 gcna (ENSSTUG00000013365) CETN1 (ENSSTUG00000013336) nsdhl (ENSSTUG00000013312) ENSSTUG00000013261 RAB9B (ENSSTUG00000013251) plp1a (ENSSTUG00000013214) pcdh20 (ENSSTUG00000013208) ENSSTUG00000013192 #16 ENSSTUG00000013174 ENSSTUG00000013169 ENSSTUG00000012893 ENSSTUG00000012860 Atlantic salmon MODERN SPECIES 24 ENSSSAG00000068638 ENSSSAG00000055555 ENSSSAG00000068620 ENSSSAG00000117393 ENSSSAG00000082479 ENSSSAG00000042018 prps1b (ENSSSAG00000115732) ENSSSAG00000110318 tmsb1 (ENSSSAG00000121843) zgc:66447 (ENSSSAG00000042245) znf711 (ENSSSAG00000068001) ENSSSAG00000111126 ENSSSAG00000092912 ENSSSAG00000098675 ENSSSAG00000063756 ENSSSAG00000063890 #22 ENSSSAG00000109761 ENSSSAG00000090880 ENSSSAG00000068530 gcna (ENSSSAG00000068535) ENSSSAG00000068543 nsdhl (ENSSSAG00000068549) ENSSSAG00000068555 ENSSSAG00000068566 plp1a (ENSSSAG00000086647) pcdh20 (ENSSSAG00000068571) ENSSSAG00000063721 ENSSSAG00000104374 ENSSSAG00000014649 ENSSSAG00000091201 nlgn3a (ENSSSAG00000121237) #16 Oncorhynchus DUPLICATION Oncorhynchus ANCESTRAL SPECIES 529 ENSGT00940000155128.a.a.b.c.b ENSGT00940000155085.d.a #22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000155085.d.a #22 Chinook salmon MODERN SPECIES 697 ENSOTSG00005040027 #22 ENSOTSG00005040026 Rainbow trout MODERN SPECIES 5 ENSOMYG00000071792 ENSOMYG00000021053 ENSOMYG00000021074 ENSOMYG00000053238 ENSOMYG00000023235 ENSOMYG00000060334 ENSOMYG00000021181 ENSOMYG00000021172 prps1b (ENSOMYG00000021158) ENSOMYG00000021140 ENSOMYG00000021131 znf711 (ENSOMYG00000021113) ENSOMYG00000021093 ENSOMYG00000042699 ENSOMYG00000047897 ENSOMYG00000021206 #22 ENSOMYG00000021246 ENSOMYG00000054467 ENSOMYG00000021267 gcna (ENSOMYG00000021270) ENSOMYG00000021296 ENSOMYG00000021322 ENSOMYG00000021364 plp1a (ENSOMYG00000021382) pcdh20 (ENSOMYG00000021393) nlgn3a (ENSOMYG00000025033) #16 ENSOMYG00000050020 ENSOMYG00000043440 ENSOMYG00000021425 kif3a (ENSOMYG00000021663) ENSOMYG00000022735 Oncorhynchus ANCESTRAL SPECIES 45 ENSGT00940000160128.bb.b ENSGT00940000155516.v.a ENSGT01090000260082.d.a.a.c.h ENSGT00390000018389.e.a ENSGT00390000014513 ENSGT00940000160622.`b.a ENSGT01030000234752 ENSGT00950000183035.a.a.bb.a ENSGT00950000182803.B.d.a.n.s.b.a ENSGT00940000161713.k ENSGT00940000176232 ENSGT00390000017860.a.a.q.a ENSGT00940000159611.g.a.a ENSGT00940000163673.c.b.b ENSGT00940000163331.a.b.f ENSGT00940000155085.d.b #22 ENSGT00970000194185.B.a ENSGT00970000194185.B.b ENSGT01100000263505.b.b.a.b.a.a.a.b.b.b.d.b ENSGT00440000040163.f ENSGT00940000157209.e ENSGT00940000158229.h ENSGT00530000063872.A.d ENSGT00940000160481.g ENSGT00390000006915.c.d.a.f.b ENSGT00940000167495.c ENSGT00940000159580.r.b #16 ENSGT00940000156123.a.b ENSGT00940000178948.a ENSGT00940000156386.n ENSGT00940000155875.s.a.b Oncorhynchus_a ANCESTRAL SPECIES 46 ENSGT00940000155516.v.a ENSGT01090000260082.d.a.a.c.h ENSGT00390000018389.e.a ENSGT00390000014513 ENSGT00940000160622.`b.a ENSGT01030000234752 ENSGT00950000183035.a.a.bb.a ENSGT00950000182803.B.d.a.n.s.b.a ENSGT00940000161713.k ENSGT00940000176232 ENSGT00390000017860.a.a.q.a ENSGT00940000159611.g.a.a ENSGT00940000163673.c.a ENSGT00940000163673.c.b.b ENSGT00940000163331.a.b.f ENSGT00940000155085.d.b #22 ENSGT00970000194185.B.a ENSGT00970000194185.B.b ENSGT01100000263505.b.b.a.b.a.a.a.b.b.b.d.b ENSGT00440000040163.f ENSGT00940000157209.e ENSGT00940000158229.h ENSGT00530000063872.A.d ENSGT00940000160481.g ENSGT00390000006915.c.d.a.f.b ENSGT00940000167495.c ENSGT00940000159580.r.b #16 ENSGT00940000156123.a.b ENSGT00940000178948.a ENSGT00940000156386.n ENSGT00940000155875.s.a.b Chinook salmon MODERN SPECIES 13 ENSOTSG00005014304 ccng1 (ENSOTSG00005014248) septin8b (ENSOTSG00005014180) ENSOTSG00005014178 gdf9 (ENSOTSG00005014177) uqcrq (ENSOTSG00005014174) ENSOTSG00005014117 hspa4b (ENSOTSG00005007462) gnpda1 (ENSOTSG00005007439) NDFIP1 (ENSOTSG00005007434) fgf1a (ENSOTSG00005007432) nr3c1 (ENSOTSG00005007431) kctd16a (ENSOTSG00005007430) ENSOTSG00005007429 ENSOTSG00005007428 OGT (ENSOTSG00005002927) #22 ENSOTSG00005002848 ENSOTSG00005002843 gcna (ENSOTSG00005002841) CETN1 (ENSOTSG00005002837) nsdhl (ENSOTSG00005002829) FRMPD3 (ENSOTSG00005002826) prps1b (ENSOTSG00005002824) SLC25A53 (ENSOTSG00005002816) tmsb1 (ENSOTSG00005002814) zgc:66447 (ENSOTSG00005002697) znf711 (ENSOTSG00005002655) kctd12b (ENSOTSG00005002577) TMEM131 (ENSOTSG00005039430) CNGA3 (ENSOTSG00005039429) ENSOTSG00005038737 Huchen MODERN SPECIES 4175 OGT (ENSHHUG00000038230) #22 ENSHHUG00000038211 Northern pike MODERN SPECIES 3 cuedc2 (ENSELUG00000004885) arhgef9b (ENSELUG00000004829) asb12b (ENSELUG00000004875) ENSELUG00000004761 ENSELUG00000024862 FRMPD3 (ENSELUG00000004746) prps1b (ENSELUG00000004733) ENSELUG00000031989 SLC25A53 (ENSELUG00000004724) tmsb1 (ENSELUG00000004711) zgc:66447 (ENSELUG00000004669) znf711 (ENSELUG00000004639) kctd12b (ENSELUG00000004624) ENSELUG00000026121 ENSELUG00000004586 ogt.2 (ENSELUG00000004547) #22 ENSELUG00000004485 ENSELUG00000027919 gcna (ENSELUG00000004469) CETN1 (ENSELUG00000004441) nsdhl (ENSELUG00000004417) ENSELUG00000004403 fut11 (ENSELUG00000004392) RAB9B (ENSELUG00000004378) plp1a (ENSELUG00000024584) pcdh20 (ENSELUG00000024539) nlgn3a (ENSELUG00000024503) #16 ENSELUG00000024375 ENSELUG00000024245 ENSELUG00000024214 ENSELUG00000024148 Acanthomorphata ANCESTRAL SPECIES 1 ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00940000176232 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.b ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000157536.b ENSGT00940000163623 ENSGT00990000203874 ENSGT01030000234513.B.a.c #17 Cod MODERN SPECIES 1 ENSGMOG00000034758 si:ch211-153b23.4 (ENSGMOG00000006012) ABCB7 (ENSGMOG00000005895) ENSGMOG00000028491 zgc:174917 (ENSGMOG00000027388) ENSGMOG00000022396 ENSGMOG00000006065 prps1b (ENSGMOG00000006089) ENSGMOG00000020193 ENSGMOG00000023757 ENSGMOG00000006110 znf711 (ENSGMOG00000032242) ENSGMOG00000006151 ENSGMOG00000006166 ENSGMOG00000022633 ENSGMOG00000006173 #22 ENSGMOG00000006212 ENSGMOG00000006286 gcna (ENSGMOG00000006320) ENSGMOG00000006349 nsdhl (ENSGMOG00000006358) ENSGMOG00000028381 fut11 (ENSGMOG00000006389) ENSGMOG00000020194 plp1a (ENSGMOG00000014579) ENSGMOG00000026701 nlgn3a (ENSGMOG00000006445) #16 ENSGMOG00000022406 ENSGMOG00000006455 ENSGMOG00000006482 ENSGMOG00000006498 Euacanthomorphacea ANCESTRAL SPECIES 10 ENSGT00390000015700.b ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00940000176232 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000157536.b ENSGT00940000163623 ENSGT00990000203874 ENSGT01030000234513.B.a.c #17 Pinecone sodierfish MODERN SPECIES 1 glod5 (ENSMMDG00005008078) irg1l (ENSMMDG00005008072) si:ch211-153b23.4 (ENSMMDG00005008068) si:ch211-153b23.5 (ENSMMDG00005008066) zgc:174917 (ENSMMDG00005008065) ENSMMDG00005008059 FRMPD3 (ENSMMDG00005008051) prps1b (ENSMMDG00005008012) SLC25A53 (ENSMMDG00005008001) ENSMMDG00005007998 zgc:66447 (ENSMMDG00005007988) znf711 (ENSMMDG00005007976) kctd12b (ENSMMDG00005007973) ENSMMDG00005007971 ENSMMDG00005007967 ogt.2 (ENSMMDG00005004999) #22 gcna (ENSMMDG00005004956) ENSMMDG00005004950 nsdhl (ENSMMDG00005004947) fut11 (ENSMMDG00005004866) RAB9B (ENSMMDG00005004853) plp1a (ENSMMDG00005004845) ENSMMDG00005004841 nlgn3a (ENSMMDG00005004475) #16 ENSMMDG00005004304 ENSMMDG00005004267 ENSMMDG00005004257 ENSMMDG00005024332 GJB1 (ENSMMDG00005024330) #17 gja2 (ENSMMDG00005024329) vma21 (ENSMMDG00005024327) Percomorphaceae ANCESTRAL SPECIES 11 ENSGT00390000015700.b ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00940000176232 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000157536.b ENSGT00940000163623 ENSGT00990000203874 ENSGT01030000234513.B.a.c #17 Tiger tail seahorse DUPLICATION Tiger tail seahorse MODERN SPECIES 175 FRMPD3 (ENSHCOG00000002858) prps1b (ENSHCOG00000002869) SLC25A53 (ENSHCOG00000002878) ENSHCOG00000002883 ENSHCOG00000002893 zgc:66447 (ENSHCOG00000000731) znf711 (ENSHCOG00000000083) kctd12b (ENSHCOG00000000744) rhogd (ENSHCOG00000002982) OGT (ENSHCOG00000003016) #22 atp5po (ENSHCOG00000003024) si:ch1073-44g3.1 (ENSHCOG00000003032) ENSHCOG00000003040 ENSHCOG00000003074 slu7 (ENSHCOG00000003110) C1QTNF2 (ENSHCOG00000003125) ccnjl (ENSHCOG00000003130) ENSHCOG00000003140 FABP6 (ENSHCOG00000003144) ENSHCOG00000003161 ENSHCOG00000003170 ENSHCOG00000003178 ENSHCOG00000000097 #35 irf2 (ENSHCOG00000003204) CASP3 (ENSHCOG00000003219) Tiger tail seahorse MODERN SPECIES 348 stk33 (ENSHCOG00000002089) ENSHCOG00000002109 dennd2b (ENSHCOG00000002128) tmem9b (ENSHCOG00000002143) scube2 (ENSHCOG00000002173) sinhcafl (ENSHCOG00000002186) DENND5A (ENSHCOG00000002214) tmem41b (ENSHCOG00000002229) ipo7 (ENSHCOG00000002290) SWAP70 (ENSHCOG00000002322) SBF2 (ENSHCOG00000002360) adma (ENSHCOG00000002374) AMPD3 (ENSHCOG00000002386) ENSHCOG00000002398 IRAG1 (ENSHCOG00000002459) ENSHCOG00000002510 #22 eif4g2a (ENSHCOG00000002542) GALNT18 (ENSHCOG00000002567) ENSHCOG00000002574 BTBD10 (ENSHCOG00000002599) RASSF10 (ENSHCOG00000002610) ENSHCOG00000002615 TEAD1 (ENSHCOG00000002648) ENSHCOG00000002669 dkk3a (ENSHCOG00000002681) usp47 (ENSHCOG00000002738) CLEC3A (ENSHCOG00000002761) vat1l (ENSHCOG00000002772) bola3 (ENSHCOG00000002784) ENSHCOG00000002853 ENSHCOG00000002890 Percomorphaceae_B ANCESTRAL SPECIES 14 ENSGT00390000015700.b ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00940000176232 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000157536.b ENSGT00940000163623 ENSGT00990000203874 ENSGT01030000234513.B.a.c #17 Ovalentaria ANCESTRAL SPECIES 15 ENSGT00390000015700.b ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00940000176232 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000157536.b ENSGT00940000163623 ENSGT00990000203874 ENSGT01030000234513.B.a.c #17 Atherinomorphae ANCESTRAL SPECIES 9 ENSGT00390000015700.b ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01100000263824 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00940000177373 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000157536.b ENSGT00940000163623 ENSGT00940000178635 ENSGT00940000164773 Cyprinodontiformes ANCESTRAL SPECIES 8 ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01100000263824 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00940000176232 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b.h.b ENSGT00940000163331.b ENSGT00940000163331.a.b.h.a ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000157536.b ENSGT00940000163623 ENSGT00990000203874 ENSGT01030000234513.B.a.c #17 Aplocheiloidei ANCESTRAL SPECIES 25 ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01100000263824 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00940000176232 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b.h.b ENSGT00940000163331.a.b.h.a ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000178635 ENSGT00940000163623 ENSGT01030000234513.B.a.c #17 ENSGT01050000244864.B.a.g.b Mangrove rivulus MODERN SPECIES 76 ENSKMAG00000006792 si:ch211-153b23.4 (ENSKMAG00000006829) si:ch211-153b23.5 (ENSKMAG00000006863) zgc:174917 (ENSKMAG00000006879) ENSKMAG00000006895 si:ch211-153b23.4 (ENSKMAG00000006919) FRMPD3 (ENSKMAG00000006951) prps1a (ENSKMAG00000006997) SLC25A53 (ENSKMAG00000007039) tmsb1 (ENSKMAG00000007049) zgc:66447 (ENSKMAG00000007067) znf711 (ENSKMAG00000007092) kctd12b (ENSKMAG00000007145) ENSKMAG00000007158 rhogd (ENSKMAG00000007191) ogt.2 (ENSKMAG00000007263) #22 gcna (ENSKMAG00000007334) CETN1 (ENSKMAG00000007375) Turquoise killifish MODERN SPECIES 1610 ENSNFUG00015002337 KIAA2022 (ENSNFUG00015002332) RLIM (ENSNFUG00015002326) glod5 (ENSNFUG00015002323) CU468142.1 (ENSNFUG00015002317) FRMPD3 (ENSNFUG00015002296) PRPS1A (ENSNFUG00015002274) MCART6 (ENSNFUG00015002268) Nfu_g_1_014702 (ENSNFUG00015002257) znf711 (ENSNFUG00015002251) kctd12b (ENSNFUG00015002246) ENSNFUG00015002244 ENSNFUG00015002241 RHOGC (ENSNFUG00015002239) FHDC1 (ENSNFUG00015002231) ogt.2 (ENSNFUG00015002106) #22 gcna (ENSNFUG00015002062) ENSNFUG00015002056 NSDHL (ENSNFUG00015002052) ENSNFUG00015002039 FUT11 (ENSNFUG00015002030) RAB9B (ENSNFUG00015002028) plp1a (ENSNFUG00015002025) pcdh20 (ENSNFUG00015002023) nlgn3a (ENSNFUG00015002005) #16 ENSNFUG00015001988 ENSNFUG00015001982 ENSNFUG00015001976 tfap2c (ENSNFUG00015001966) ENSNFUG00015001960 ENSNFUG00015001595 Cyprinodontoidei ANCESTRAL SPECIES 19 ENSGT00390000015364.a.b.a.g ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01100000263824 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00940000177373 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b.h.b ENSGT00940000163331.a.a ENSGT00940000163331.a.b.h.a ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000157536.b ENSGT00940000163623 ENSGT00990000203874 ENSGT01030000234513.B.a.c #17 Poeciliinae ANCESTRAL SPECIES 11 ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT00390000015700.b.j ENSGT01100000263824 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00940000177373 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b.h.b ENSGT00940000163331.a.a ENSGT00940000163331.a.b.h.a ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000157536.b ENSGT00940000163623 ENSGT00990000203874 ENSGT01030000234513.B.a.c #17 Poecilia ANCESTRAL SPECIES 21 ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT00390000015700.b.j ENSGT01100000263824 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00940000177373 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b.h.b ENSGT00940000163331.a.a ENSGT00940000163331.a.b.h.a ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580.n #16 ENSGT00940000159580.m #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000157536.b ENSGT00940000163623 ENSGT00990000203874 NAME_6 ANCESTRAL SPECIES 17 ENSGT00390000015700.b.j ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a.h ENSGT00390000003706.a.b.a.f ENSGT01100000263824 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00940000177373 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b.h.b ENSGT00940000163331.a.b.h.a ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00390000011709.gb ENSGT00940000159580.n #16 ENSGT00940000159580.m #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000157536.b ENSGT00940000163623 Sailfin molly MODERN SPECIES 1724 ENSPLAG00000012208 ENSPLAG00000012196 ENSPLAG00000012178 ogt.2 (ENSPLAG00000012020) #22 gcna (ENSPLAG00000011919) ENSPLAG00000011913 nsdhl (ENSPLAG00000011906) ENSPLAG00000000722 fut11 (ENSPLAG00000011869) RAB9B (ENSPLAG00000011866) plp1a (ENSPLAG00000011845) ENSPLAG00000011832 si:dkey-27i16.2 (ENSPLAG00000011822) nlgn3a (ENSPLAG00000011814) #16 Amazon molly MODERN SPECIES 278 si:ch211-153b23.5 (ENSPFOG00000012229) zgc:174917 (ENSPFOG00000012233) zgc:174917 (ENSPFOG00000012249) irg1l (ENSPFOG00000012279) ENSPFOG00000012289 si:ch211-153b23.5 (ENSPFOG00000012320) ENSPFOG00000022224 FRMPD3 (ENSPFOG00000012335) prps1b (ENSPFOG00000024767) zgc:66447 (ENSPFOG00000012558) znf711 (ENSPFOG00000012567) kctd12b (ENSPFOG00000012586) ENSPFOG00000012588 ENSPFOG00000020056 ENSPFOG00000012592 ogt.2 (ENSPFOG00000012620) #22 gcna (ENSPFOG00000012730) ENSPFOG00000012768 nsdhl (ENSPFOG00000012781) ENSPFOG00000012820 fut11 (ENSPFOG00000012929) fut11 (ENSPFOG00000012850) plp1a (ENSPFOG00000012869) RAB9B (ENSPFOG00000020060) plp1a (ENSPFOG00000012941) pcdh20 (ENSPFOG00000012959) si:dkey-27i16.2 (ENSPFOG00000023700) nlgn3a (ENSPFOG00000012965) #16 ENSPFOG00000022401 ENSPFOG00000012966 eda (ENSPFOG00000013097) Guppy MODERN SPECIES 440 ARHGEF37 (ENSPREG00000007695) ELP1 (ENSPREG00000007602) CPXM1 (ENSPREG00000007548) SMU1 (ENSPREG00000007516) zgc:174917 (ENSPREG00000007492) irg1l (ENSPREG00000007475) ENSPREG00000007456 FRMPD3 (ENSPREG00000007423) prps1b (ENSPREG00000007387) SLC25A53 (ENSPREG00000007377) zgc:66447 (ENSPREG00000007346) znf711 (ENSPREG00000007328) kctd12b (ENSPREG00000007319) ENSPREG00000007310 rhogc (ENSPREG00000007175) ogt.2 (ENSPREG00000007076) #22 gcna (ENSPREG00000007051) ENSPREG00000007030 nsdhl (ENSPREG00000007018) fut11 (ENSPREG00000006989) RAB9B (ENSPREG00000006970) plp1a (ENSPREG00000006947) pcdh20 (ENSPREG00000006932) si:dkey-27i16.2 (ENSPREG00000006921) nlgn3a (ENSPREG00000006911) #16 ENSPREG00000006891 NOCT (ENSPREG00000006876) ENSPREG00000006863 ENSPREG00000006849 ENSPREG00000006839 naa15a (ENSPREG00000006781) Platyfish MODERN SPECIES 15 zgc:174917 (ENSXMAG00000009414) irg1l (ENSXMAG00000009409) si:ch211-153b23.4 (ENSXMAG00000009416) si:ch211-153b23.5 (ENSXMAG00000009413) ENSXMAG00000027911 FRMPD3 (ENSXMAG00000009419) prps1b (ENSXMAG00000009423) SLC25A53 (ENSXMAG00000019495) ENSXMAG00000025511 zgc:66447 (ENSXMAG00000009431) znf711 (ENSXMAG00000022564) kctd12b (ENSXMAG00000026859) ENSXMAG00000009464 rhogc (ENSXMAG00000009465) ENSXMAG00000009468 ogt.2 (ENSXMAG00000009473) #22 gcna (ENSXMAG00000009522) ENSXMAG00000009525 nsdhl (ENSXMAG00000009534) ENSXMAG00000027102 fut11 (ENSXMAG00000009550) RAB9B (ENSXMAG00000019499) plp1a (ENSXMAG00000009555) pcdh20 (ENSXMAG00000023096) si:dkey-27i16.2 (ENSXMAG00000029616) nlgn3a (ENSXMAG00000009563) #16 ENSXMAG00000009589 eda (ENSXMAG00000009620) ENSXMAG00000009623 ENSXMAG00000023239 ENSXMAG00000023356 NAME_4 ANCESTRAL SPECIES 20 ENSGT00390000015700.b ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a.g ENSGT01100000263824 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT01090000261327 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b.h.b ENSGT00940000163331.a.a ENSGT00940000163331.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000157536.b ENSGT00940000164773 ENSGT00940000163623 ENSGT01030000234513.B.a.c #17 Mummichog MODERN SPECIES 235 si:ch211-153b23.5 (ENSFHEG00000009977) zgc:174917 (ENSFHEG00000009968) irg1l (ENSFHEG00000009921) si:ch211-153b23.4 (ENSFHEG00000009888) si:ch211-153b23.5 (ENSFHEG00000009830) ENSFHEG00000009821 FRMPD3 (ENSFHEG00000009814) SLC25A53 (ENSFHEG00000009768) ENSFHEG00000009765 zgc:66447 (ENSFHEG00000009759) znf711 (ENSFHEG00000009751) kctd12b (ENSFHEG00000009708) ENSFHEG00000009704 rhogd (ENSFHEG00000009684) ENSFHEG00000009589 ogt.2 (ENSFHEG00000009574) #22 gcna (ENSFHEG00000009500) ENSFHEG00000009481 nsdhl (ENSFHEG00000009446) fut11 (ENSFHEG00000009418) RAB9B (ENSFHEG00000009417) plp1a (ENSFHEG00000009394) pcdh20 (ENSFHEG00000009348) si:dkey-27i16.2 (ENSFHEG00000000606) nlgn3a (ENSFHEG00000009327) #16 ENSFHEG00000009310 eda (ENSFHEG00000009270) ENSFHEG00000009261 GJB1 (ENSFHEG00000009237) #17 ENSFHEG00000009225 gja2 (ENSFHEG00000009205) Sheepshead minnow MODERN SPECIES 348 ENSCVAG00000021124 si:ch211-153b23.4 (ENSCVAG00000021145) si:ch211-153b23.5 (ENSCVAG00000021159) ENSCVAG00000021167 ENSCVAG00000021199 ENSCVAG00000021223 FRMPD3 (ENSCVAG00000021231) ENSCVAG00000021263 SLC25A53 (ENSCVAG00000021282) ENSCVAG00000021299 zgc:66447 (ENSCVAG00000021316) znf711 (ENSCVAG00000021425) kctd12b (ENSCVAG00000021436) ENSCVAG00000021451 rhogc (ENSCVAG00000021592) ogt.2 (ENSCVAG00000021670) #22 gcna (ENSCVAG00000021700) CETN1 (ENSCVAG00000021721) nsdhl (ENSCVAG00000021732) ENSCVAG00000021758 fut11 (ENSCVAG00000021802) RAB9B (ENSCVAG00000021826) plp1a (ENSCVAG00000000885) pcdh20 (ENSCVAG00000021848) si:dkey-27i16.2 (ENSCVAG00000021875) nlgn3a (ENSCVAG00000021896) #16 Oryzias ANCESTRAL SPECIES 17 ENSGT00390000015700.b ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01100000263824 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00940000177373 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000178635 ENSGT00940000164773 ENSGT00990000203874 ENSGT01030000234513.B.a.c #17 Oryzias_b ANCESTRAL SPECIES 20 ENSGT00390000015700.b ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01100000263824 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00940000177373 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00990000203874 ENSGT01030000234513.B.a.c #17 ENSGT01050000244864.B.a.g.b ENSGT00390000017980 Indian medaka MODERN SPECIES 16 RLIM (ENSOMEG00000007604) irg1l (ENSOMEG00000007624) ENSOMEG00000007661 si:ch211-153b23.4 (ENSOMEG00000007682) si:ch211-153b23.5 (ENSOMEG00000007710) zgc:174917 (ENSOMEG00000007731) ENSOMEG00000007763 FRMPD3 (ENSOMEG00000000197) prps1b (ENSOMEG00000007834) ENSOMEG00000007848 ENSOMEG00000007858 zgc:66447 (ENSOMEG00000007887) znf711 (ENSOMEG00000007929) kctd12b (ENSOMEG00000007942) rhogd (ENSOMEG00000008047) ogt.2 (ENSOMEG00000008130) #22 gcna (ENSOMEG00000008190) CETN1 (ENSOMEG00000008224) nsdhl (ENSOMEG00000008251) ENSOMEG00000008282 fut11 (ENSOMEG00000008306) RAB9B (ENSOMEG00000008327) plp1a (ENSOMEG00000008366) pcdh20 (ENSOMEG00000008378) nlgn3a (ENSOMEG00000008422) #16 ENSOMEG00000008550 eda (ENSOMEG00000008588) ENSOMEG00000008596 ENSOMEG00000008607 GJB1 (ENSOMEG00000008622) #17 gja2 (ENSOMEG00000008630) Javanese ricefish MODERN SPECIES 1 ENSOJAG00000001615 si:ch211-153b23.4 (ENSOJAG00000001597) si:ch211-153b23.5 (ENSOJAG00000001579) zgc:174917 (ENSOJAG00000022614) ENSOJAG00000022608 FRMPD3 (ENSOJAG00000022592) prps1b (ENSOJAG00000022577) ENSOJAG00000022568 SLC25A53 (ENSOJAG00000022565) ENSOJAG00000022560 zgc:66447 (ENSOJAG00000022553) znf711 (ENSOJAG00000022551) kctd12b (ENSOJAG00000022549) ENSOJAG00000022546 ENSOJAG00000022543 ogt.2 (ENSOJAG00000022272) #22 gcna (ENSOJAG00000022258) CETN1 (ENSOJAG00000022214) nsdhl (ENSOJAG00000022205) ENSOJAG00000022188 fut11 (ENSOJAG00000022163) RAB9B (ENSOJAG00000022153) plp1a (ENSOJAG00000022146) ENSOJAG00000022140 nlgn3a (ENSOJAG00000022102) #16 ENSOJAG00000021477 eda (ENSOJAG00000021394) ENSOJAG00000021382 ENSOJAG00000021374 GJB1 (ENSOJAG00000021371) #17 gja2 (ENSOJAG00000021367) Oryzias_a ANCESTRAL SPECIES 22 ENSGT00390000015700.b ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01100000263824 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00940000177373 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000164773 ENSGT01030000234513.B.a.c #17 ENSGT00990000203874 ENSGT01050000244864.B.a.g.b Chinese medaka MODERN SPECIES 25 irg1l (ENSOSIG00000000290) ENSOSIG00000000306 si:ch211-153b23.4 (ENSOSIG00000000309) si:ch211-153b23.5 (ENSOSIG00000000311) zgc:174917 (ENSOSIG00000000315) ENSOSIG00000000319 FRMPD3 (ENSOSIG00000000333) prps1b (ENSOSIG00000000348) ENSOSIG00000000428 ENSOSIG00000000429 zgc:66447 (ENSOSIG00000000430) znf711 (ENSOSIG00000000433) kctd12b (ENSOSIG00000000434) ENSOSIG00000000436 ENSOSIG00000000437 ogt.2 (ENSOSIG00000000439) #22 gcna (ENSOSIG00000000506) CETN1 (ENSOSIG00000000507) fut11 (ENSOSIG00000000510) RAB9B (ENSOSIG00000000511) plp1a (ENSOSIG00000000512) pcdh20 (ENSOSIG00000000513) nlgn3a (ENSOSIG00000000515) #16 ENSOSIG00000000560 eda (ENSOSIG00000006698) ENSOSIG00000006700 GJB1 (ENSOSIG00000006701) #17 gja2 (ENSOSIG00000006702) vma21 (ENSOSIG00000006703) mtnr1c (ENSOSIG00000006704) neurl1b (ENSOSIG00000006705) Japanese Medaka HdrR MODERN SPECIES 1 irg1l (ENSORLG00000006152) ENSORLG00000006161 si:ch211-153b23.4 (ENSORLG00000006169) si:ch211-153b23.5 (ENSORLG00000006177) zgc:174917 (ENSORLG00000006186) ENSORLG00000027652 FRMPD3 (ENSORLG00000006198) prps1b (ENSORLG00000006220) ENSORLG00000006223 ENSORLG00000029374 zgc:66447 (ENSORLG00000006232) znf711 (ENSORLG00000006241) kctd12b (ENSORLG00000006250) rhogd (ENSORLG00000006261) ENSORLG00000006264 ogt.2 (ENSORLG00000006316) #22 gcna (ENSORLG00000006328) CETN1 (ENSORLG00000006352) nsdhl (ENSORLG00000006376) ENSORLG00000030414 fut11 (ENSORLG00000006402) ENSORLG00000006405 plp1a (ENSORLG00000006441) pcdh20 (ENSORLG00000006448) si:dkey-27i16.2 (ENSORLG00000024318) nlgn3a (ENSORLG00000006464) #16 ENSORLG00000006513 eda (ENSORLG00000006521) ENSORLG00000006524 GJB1 (ENSORLG00000006528) #17 ENSORLG00000030460 Ovalentaria_B ANCESTRAL SPECIES 13 ENSGT00390000015700.b ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00940000176232 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000157536.b ENSGT00940000163623 ENSGT00990000203874 ENSGT01030000234513.B.a.c #17 Pomacentridae ANCESTRAL SPECIES 4 ENSGT00390000015700.b ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00940000176232 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000178635 ENSGT00990000203874 ENSGT01030000234513.B.a.c #17 ENSGT01050000244864.B.a.g.b Pomacentridae_A ANCESTRAL SPECIES 17 ENSGT00390000015700.b ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00940000176232 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000178635 ENSGT00940000164773.f ENSGT00990000203874 ENSGT01030000234513.B.a.c #17 Amphiprion ANCESTRAL SPECIES 26 ENSGT00390000001775.A.u ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT01090000262057 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000178635 ENSGT00940000164773.f ENSGT00990000203874 ENSGT01030000234513.B.a.c #17 Orange clownfish MODERN SPECIES 4 ENSAPEG00000015115 gpr137 (ENSAPEG00000015083) syvn1 (ENSAPEG00000015066) smad5 (ENSAPEG00000015002) ap1ar (ENSAPEG00000014952) zgc:174917 (ENSAPEG00000014890) ENSAPEG00000014880 FRMPD3 (ENSAPEG00000014815) prps1b (ENSAPEG00000014806) SLC25A53 (ENSAPEG00000014794) ENSAPEG00000014779 zgc:66447 (ENSAPEG00000014769) znf711 (ENSAPEG00000014738) kctd12b (ENSAPEG00000014705) rhogd (ENSAPEG00000014498) ogt.2 (ENSAPEG00000014401) #22 gcna (ENSAPEG00000014324) CETN1 (ENSAPEG00000014289) nsdhl (ENSAPEG00000014255) ENSAPEG00000014208 fut11 (ENSAPEG00000014171) RAB9B (ENSAPEG00000014149) plp1a (ENSAPEG00000014122) pcdh20 (ENSAPEG00000014116) si:dkey-27i16.2 (ENSAPEG00000014095) nlgn3a (ENSAPEG00000014061) #16 ENSAPEG00000013997 eda (ENSAPEG00000013920) ENSAPEG00000013893 ENSAPEG00000013885 ENSAPEG00000013877 Clown anemonefish MODERN SPECIES 594 rbm47 (ENSAOCG00000022245) APBB2 (ENSAOCG00000022318) ENSAOCG00000001629 fam184b (ENSAOCG00000022350) ncapg (ENSAOCG00000022361) ENSAOCG00000022416 FRMPD3 (ENSAOCG00000022453) prps1b (ENSAOCG00000001808) SLC25A53 (ENSAOCG00000022504) ENSAOCG00000022523 zgc:66447 (ENSAOCG00000022533) znf711 (ENSAOCG00000022565) kctd12b (ENSAOCG00000022579) ENSAOCG00000022651 ENSAOCG00000022665 ogt.2 (ENSAOCG00000022718) #22 gcna (ENSAOCG00000022737) CETN1 (ENSAOCG00000022762) nsdhl (ENSAOCG00000022788) fut11 (ENSAOCG00000022802) RAB9B (ENSAOCG00000022810) plp1a (ENSAOCG00000022831) pcdh20 (ENSAOCG00000022843) si:dkey-27i16.2 (ENSAOCG00000022854) Spiny chromis MODERN SPECIES 125 cep76 (ENSAPOG00000008493) id4 (ENSAPOG00000008378) FRMPD3 (ENSAPOG00000008356) ENSAPOG00000000218 SLC25A53 (ENSAPOG00000007781) tmsb1 (ENSAPOG00000007766) zgc:66447 (ENSAPOG00000007753) znf711 (ENSAPOG00000007726) kctd12b (ENSAPOG00000007684) rhogd (ENSAPOG00000007671) ogt.2 (ENSAPOG00000007484) #22 gcna (ENSAPOG00000007411) CETN1 (ENSAPOG00000007400) nsdhl (ENSAPOG00000007377) znf185 (ENSAPOG00000007315) fut11 (ENSAPOG00000007275) RAB9B (ENSAPOG00000007269) plp1a (ENSAPOG00000007230) pcdh20 (ENSAPOG00000007203) si:dkey-27i16.2 (ENSAPOG00000007192) nlgn3a (ENSAPOG00000007182) #16 Bicolor damselfish MODERN SPECIES 1681 rhogd (ENSSPAG00000010069) ENSSPAG00000010053 ogt.2 (ENSSPAG00000009912) #22 gcna (ENSSPAG00000009884) CETN1 (ENSSPAG00000009867) nsdhl (ENSSPAG00000009836) fut11 (ENSSPAG00000009822) RAB9B (ENSSPAG00000009806) plp1a (ENSSPAG00000009788) pcdh20 (ENSSPAG00000009745) si:dkey-27i16.2 (ENSSPAG00000009730) Cichlidae ANCESTRAL SPECIES 8 ENSGT00390000015700.b ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00940000177373 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495.f ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000157536.b ENSGT00940000163623 ENSGT00990000203874 ENSGT01030000234513.B.a.c #17 Midas cichlid MODERN SPECIES 974 irg1l (ENSACIG00000006938) ENSACIG00000006968 si:ch211-153b23.4 (ENSACIG00000006997) si:ch211-153b23.5 (ENSACIG00000007026) zgc:174917 (ENSACIG00000007042) ENSACIG00000007068 FRMPD3 (ENSACIG00000007082) prps1b (ENSACIG00000007119) SLC25A53 (ENSACIG00000007142) ENSACIG00000007151 zgc:66447 (ENSACIG00000007159) znf711 (ENSACIG00000007188) kctd12b (ENSACIG00000007225) rhogd (ENSACIG00000007241) ENSACIG00000007402 ogt.2 (ENSACIG00000007421) #22 gcna (ENSACIG00000007479) CETN1 (ENSACIG00000007530) nsdhl (ENSACIG00000007541) ENSACIG00000007604 fut11 (ENSACIG00000007659) RAB9B (ENSACIG00000007739) plp1a (ENSACIG00000007753) pcdh20 (ENSACIG00000007768) si:dkey-27i16.2 (ENSACIG00000007771) nlgn3a (ENSACIG00000007781) #16 ENSACIG00000007803 ENSACIG00000007840 eda (ENSACIG00000007845) ENSACIG00000007866 ENSACIG00000007888 Pseudocrenilabrinae ANCESTRAL SPECIES 17 ENSGT00390000015700.b ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00940000177373 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495.f ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220.l ENSGT00730000111220.k.a ENSGT00940000157536.b ENSGT00940000163623 ENSGT01030000234513.B.a.c #17 Nile tilapia MODERN SPECIES 11 zgc:174917 (ENSONIG00000017870) ENSONIG00000023795 ENSONIG00000038379 gnpda1 (ENSONIG00000038115) ENSONIG00000033322 gnpda1 (ENSONIG00000041629) FRMPD3 (ENSONIG00000038823) prps1b (ENSONIG00000017867) SLC25A53 (ENSONIG00000017866) ENSONIG00000035305 zgc:66447 (ENSONIG00000017863) znf711 (ENSONIG00000017856) kctd12b (ENSONIG00000020583) ENSONIG00000020582 ENSONIG00000017853 ogt.2 (ENSONIG00000017846) #22 ENSONIG00000027452 gcna (ENSONIG00000017845) CETN1 (ENSONIG00000017843) nsdhl (ENSONIG00000030892) ENSONIG00000032551 fut11 (ENSONIG00000017837) RAB9B (ENSONIG00000020581) plp1a (ENSONIG00000031219) pcdh20 (ENSONIG00000017834) nlgn3a (ENSONIG00000017826) #16 ENSONIG00000017818 eda (ENSONIG00000043151) ENSONIG00000017815 ENSONIG00000017814 GJB1 (ENSONIG00000020580) #17 Pseudocrenilabrinae_A ANCESTRAL SPECIES 20 ENSGT00390000015700.b ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00940000177373 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00940000178144 ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495.f ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220.l ENSGT00730000111220.k.a ENSGT00940000157536.b ENSGT00940000163623 ENSGT01030000234513.B.a.c #17 Haplochromini ANCESTRAL SPECIES 14 ENSGT00390000015700.b ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00940000177373 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00940000178144 ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495.f ENSGT00390000011709.gb ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220.k.a ENSGT00940000157536.b ENSGT00940000163623 ENSGT01030000234513.B.a.c #17 Haplochromini_A ANCESTRAL SPECIES 13 ENSGT00390000015700.b ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00940000177373 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00940000178144 ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495.f ENSGT00390000011709.gb ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220.k.a ENSGT00940000157536.b ENSGT00940000163623 ENSGT01030000234513.B.a.c #17 P. nyererei MODERN SPECIES 296 glod5 (ENSPNYG00000000253) irg1l (ENSPNYG00000000252) ENSPNYG00000000251 si:ch211-153b23.4 (ENSPNYG00000000250) si:ch211-153b23.5 (ENSPNYG00000000249) zgc:174917 (ENSPNYG00000000248) ENSPNYG00000000247 FRMPD3 (ENSPNYG00000000246) prps1b (ENSPNYG00000000245) SLC25A53 (ENSPNYG00000000244) ENSPNYG00000000243 zgc:66447 (ENSPNYG00000000242) znf711 (ENSPNYG00000000241) kctd12b (ENSPNYG00000000240) ENSPNYG00000000239 ogt.2 (ENSPNYG00000000238) #22 gcna (ENSPNYG00000000237) CETN1 (ENSPNYG00000000236) nsdhl (ENSPNYG00000000235) fut11 (ENSPNYG00000000234) RAB9B (ENSPNYG00000000233) plp1a (ENSPNYG00000000232) pcdh20 (ENSPNYG00000000231) si:dkey-27i16.2 (ENSPNYG00000000230) nlgn3a (ENSPNYG00000000229) #16 ENSPNYG00000000228 eda (ENSPNYG00000000227) ENSPNYG00000000226 GJB1 (ENSPNYG00000000225) #17 gja2 (ENSPNYG00000000224) vma21 (ENSPNYG00000000223) Haplochromini_B ANCESTRAL SPECIES 7 ENSGT00390000015700.b ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00940000177373 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00940000178144 ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495.f ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220.k.a ENSGT00940000157536.b ENSGT00940000163623 ENSGT01030000234513.B.a.c #17 ENSGT01050000244864.B.a.g.b Eastern happy MODERN SPECIES 11 ENSACLG00000005894 si:ch211-153b23.4 (ENSACLG00000005471) si:ch211-153b23.5 (ENSACLG00000005461) zgc:174917 (ENSACLG00000005442) ENSACLG00000005430 ENSACLG00000005419 FRMPD3 (ENSACLG00000005410) prps1b (ENSACLG00000005388) SLC25A53 (ENSACLG00000005374) ENSACLG00000005370 zgc:66447 (ENSACLG00000005327) znf711 (ENSACLG00000005105) kctd12b (ENSACLG00000005098) ENSACLG00000004974 ENSACLG00000004943 ogt.2 (ENSACLG00000004896) #22 gcna (ENSACLG00000004878) CETN1 (ENSACLG00000004861) nsdhl (ENSACLG00000004846) ENSACLG00000004837 fut11 (ENSACLG00000004814) RAB9B (ENSACLG00000004795) plp1a (ENSACLG00000004759) pcdh20 (ENSACLG00000004740) si:dkey-27i16.2 (ENSACLG00000004724) nlgn3a (ENSACLG00000004649) #16 ENSACLG00000004470 eda (ENSACLG00000004397) ENSACLG00000004388 ENSACLG00000004385 ENSACLG00000004376 Zebra mbuna MODERN SPECIES 1102 irg1l (ENSMZEG00005011462) ENSMZEG00005011450 si:ch211-153b23.4 (ENSMZEG00005011433) si:ch211-153b23.5 (ENSMZEG00005011418) zgc:174917 (ENSMZEG00005011408) ENSMZEG00005011404 FRMPD3 (ENSMZEG00005011358) prps1b (ENSMZEG00005011343) SLC25A53 (ENSMZEG00005011338) ENSMZEG00005011332 zgc:66447 (ENSMZEG00005011316) znf711 (ENSMZEG00005011309) kctd12b (ENSMZEG00005011305) ENSMZEG00005010589 ENSMZEG00005010565 ogt.2 (ENSMZEG00005010496) #22 gcna (ENSMZEG00005010480) CETN1 (ENSMZEG00005010468) nsdhl (ENSMZEG00005010461) ENSMZEG00005010417 fut11 (ENSMZEG00005010400) RAB9B (ENSMZEG00005010392) plp1a (ENSMZEG00005010374) pcdh20 (ENSMZEG00005010362) si:dkey-27i16.2 (ENSMZEG00005010357) nlgn3a (ENSMZEG00005010342) #16 ENSMZEG00005010313 ENSMZEG00005010287 ENSMZEG00005010271 eda (ENSMZEG00005010252) ENSMZEG00005010245 Burton s mouthbrooder MODERN SPECIES 310 glod5 (ENSHBUG00000001783) irg1l (ENSHBUG00000001766) ENSHBUG00000001760 si:ch211-153b23.4 (ENSHBUG00000000013) ENSHBUG00000001740 ENSHBUG00000001733 ENSHBUG00000001727 FRMPD3 (ENSHBUG00000001721) prps1b (ENSHBUG00000001713) SLC25A53 (ENSHBUG00000001701) zgc:66447 (ENSHBUG00000001695) znf711 (ENSHBUG00000001685) kctd12b (ENSHBUG00000001673) rhogd (ENSHBUG00000001668) ENSHBUG00000001659 ogt.2 (ENSHBUG00000001642) #22 gcna (ENSHBUG00000001628) CETN1 (ENSHBUG00000001618) nsdhl (ENSHBUG00000001609) fut11 (ENSHBUG00000001600) RAB9B (ENSHBUG00000001595) plp1a (ENSHBUG00000001590) pcdh20 (ENSHBUG00000001581) si:dkey-27i16.2 (ENSHBUG00000001574) nlgn3a (ENSHBUG00000001563) #16 Lyretail cichlid DUPLICATION Lyretail cichlid MODERN SPECIES 292 glod5 (ENSNBRG00000013345) irg1l (ENSNBRG00000013354) ENSNBRG00000013370 si:ch211-153b23.4 (ENSNBRG00000013392) si:ch211-153b23.5 (ENSNBRG00000013408) zgc:174917 (ENSNBRG00000013423) ENSNBRG00000013442 FRMPD3 (ENSNBRG00000013463) prps1b (ENSNBRG00000013497) SLC25A53 (ENSNBRG00000013517) ENSNBRG00000013520 zgc:66447 (ENSNBRG00000013526) znf711 (ENSNBRG00000013550) kctd12b (ENSNBRG00000013575) rhogd (ENSNBRG00000013584) ENSNBRG00000013735 #22 OGT (ENSNBRG00000013750) #22 gcna (ENSNBRG00000013812) CETN1 (ENSNBRG00000013872) nsdhl (ENSNBRG00000013901) fut11 (ENSNBRG00000013922) RAB9B (ENSNBRG00000013940) plp1a (ENSNBRG00000013969) pcdh20 (ENSNBRG00000013991) si:dkey-27i16.2 (ENSNBRG00000013999) nlgn3a (ENSNBRG00000014013) #16 ENSNBRG00000014042 eda (ENSNBRG00000014085) ENSNBRG00000014127 ENSNBRG00000014150 GJB1 (ENSNBRG00000014170) #17 Lyretail cichlid MODERN SPECIES 292 irg1l (ENSNBRG00000013354) ENSNBRG00000013370 si:ch211-153b23.4 (ENSNBRG00000013392) si:ch211-153b23.5 (ENSNBRG00000013408) zgc:174917 (ENSNBRG00000013423) ENSNBRG00000013442 FRMPD3 (ENSNBRG00000013463) prps1b (ENSNBRG00000013497) SLC25A53 (ENSNBRG00000013517) ENSNBRG00000013520 zgc:66447 (ENSNBRG00000013526) znf711 (ENSNBRG00000013550) kctd12b (ENSNBRG00000013575) rhogd (ENSNBRG00000013584) ENSNBRG00000013735 #22 OGT (ENSNBRG00000013750) #22 gcna (ENSNBRG00000013812) CETN1 (ENSNBRG00000013872) nsdhl (ENSNBRG00000013901) fut11 (ENSNBRG00000013922) RAB9B (ENSNBRG00000013940) plp1a (ENSNBRG00000013969) pcdh20 (ENSNBRG00000013991) si:dkey-27i16.2 (ENSNBRG00000013999) nlgn3a (ENSNBRG00000014013) #16 ENSNBRG00000014042 eda (ENSNBRG00000014085) ENSNBRG00000014127 ENSNBRG00000014150 GJB1 (ENSNBRG00000014170) #17 gja2 (ENSNBRG00000014189) Percomorphaceae_C ANCESTRAL SPECIES 16 ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT01090000261327 ENSGT00940000177373 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000157536.b ENSGT00940000163623 ENSGT00990000203874 ENSGT01030000234513.B.a.c #17 Eupercaria ANCESTRAL SPECIES 12 ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT01090000262057 ENSGT00940000177373 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000157536.b ENSGT00940000163623 ENSGT00990000203874 ENSGT01030000234513.B.a.c #17 Tetraodontidae ANCESTRAL SPECIES 9 ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT00390000015700.b ENSGT00390000015364.a.b.b ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT01090000262057 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000157536.b ENSGT01030000234513.B.a.c #17 ENSGT01050000244864.B.a.g.b ENSGT00390000017980 Fugu MODERN SPECIES 5 glod5 (ENSTRUG00000023963) si:ch211-153b23.4 (ENSTRUG00000031149) irg1l (ENSTRUG00000031604) ENSTRUG00000025914 si:ch211-153b23.5 (ENSTRUG00000031310) zgc:174917 (ENSTRUG00000010415) FRMPD3 (ENSTRUG00000027095) prps1b (ENSTRUG00000010249) ENSTRUG00000010214 ENSTRUG00000023375 zgc:66447 (ENSTRUG00000010181) znf711 (ENSTRUG00000019723) kctd12b (ENSTRUG00000009948) ENSTRUG00000009931 ENSTRUG00000021678 ogt.2 (ENSTRUG00000009559) #22 gcna (ENSTRUG00000030662) CETN1 (ENSTRUG00000009441) nsdhl (ENSTRUG00000009297) ENSTRUG00000026581 ENSTRUG00000028283 fut11 (ENSTRUG00000009171) RAB9B (ENSTRUG00000009157) plp1a (ENSTRUG00000025376) pcdh20 (ENSTRUG00000008900) nlgn3a (ENSTRUG00000008583) #16 ENSTRUG00000007674 ENSTRUG00000023343 ENSTRUG00000025829 ENSTRUG00000007540 gja2 (ENSTRUG00000031385) Tetraodon MODERN SPECIES NEXMIF (ENSTNIG00000000495) RLIM (ENSTNIG00000008956) glod5 (ENSTNIG00000008957) si:ch211-153b23.4 (ENSTNIG00000008958) si:ch211-153b23.5 (ENSTNIG00000008959) zgc:174917 (ENSTNIG00000008960) irg1l (ENSTNIG00000008961) ENSTNIG00000008962 ENSTNIG00000008963 SLC25A53 (ENSTNIG00000008964) zgc:66447 (ENSTNIG00000008965) znf711 (ENSTNIG00000008966) kctd12b (ENSTNIG00000008967) ENSTNIG00000000346 ENSTNIG00000008968 ogt.2 (ENSTNIG00000008969) #22 gcna (ENSTNIG00000008970) CETN1 (ENSTNIG00000008971) nsdhl (ENSTNIG00000008972) ENSTNIG00000008973 fut11 (ENSTNIG00000008974) RAB9B (ENSTNIG00000008975) plp1a (ENSTNIG00000008976) nlgn3a (ENSTNIG00000008977) #16 ENSTNIG00000008978 eda (ENSTNIG00000008979) ENSTNIG00000008980 #17 gja2 (ENSTNIG00000008981) mtnr1c (ENSTNIG00000008982) neurl1b (ENSTNIG00000008983) dusp1 (ENSTNIG00000008984) Eupecaria_A ANCESTRAL SPECIES 13 ENSGT00940000153941.a.b ENSGT00390000015700.b ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000157536.b ENSGT00940000163623 ENSGT00990000203874 ENSGT01030000234513.B.a.c #17 Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 367 OGT (ENSLBEG00000011861) #22 ENSLBEG00000011839 #22 gcna (ENSLBEG00000011814) ENSLBEG00000011784 nsdhl (ENSLBEG00000011738) znf185 (ENSLBEG00000011542) fut11 (ENSLBEG00000011693) RAB9B (ENSLBEG00000011478) plp1a (ENSLBEG00000011431) pcdh20 (ENSLBEG00000011410) si:dkey-27i16.2 (ENSLBEG00000011384) nlgn3a (ENSLBEG00000011312) #16 ENSLBEG00000011150 eda (ENSLBEG00000011092) ENSLBEG00000011081 GJB1 (ENSLBEG00000011059) #17 Ballan wrasse MODERN SPECIES 367 OGT (ENSLBEG00000011861) #22 ENSLBEG00000011839 #22 gcna (ENSLBEG00000011814) ENSLBEG00000011784 nsdhl (ENSLBEG00000011738) znf185 (ENSLBEG00000011542) fut11 (ENSLBEG00000011693) RAB9B (ENSLBEG00000011478) plp1a (ENSLBEG00000011431) pcdh20 (ENSLBEG00000011410) si:dkey-27i16.2 (ENSLBEG00000011384) nlgn3a (ENSLBEG00000011312) #16 ENSLBEG00000011150 eda (ENSLBEG00000011092) ENSLBEG00000011081 GJB1 (ENSLBEG00000011059) #17 gja2 (ENSLBEG00000011032) Eupecaria_B ANCESTRAL SPECIES 13 ENSGT00940000153941.a.b ENSGT00390000015700.b ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000157536.b ENSGT00940000163623 ENSGT00990000203874 ENSGT01030000234513.B.a.c #17 Eupecaria_C ANCESTRAL SPECIES 12 ENSGT00940000153941.a.b ENSGT00390000015700.b ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000157536.b ENSGT00940000163623 ENSGT01030000234513.B.a.c #17 ENSGT01050000244864.B.a.g.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 14 ENSGT00940000153941.a.b ENSGT00390000015700.b ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000157536.b ENSGT00940000163623 ENSGT01030000234513.B.a.c #17 ENSGT01050000244864.B.a.g.b European seabass MODERN SPECIES 12 RLIM (ENSDLAG00005026581) irg1l (ENSDLAG00005009077) ENSDLAG00005009090 si:ch211-153b23.4 (ENSDLAG00005009098) si:ch211-153b23.5 (ENSDLAG00005009113) zgc:174917 (ENSDLAG00005009117) ENSDLAG00005029774 ENSDLAG00005009142 prps1b (ENSDLAG00005009157) ENSDLAG00005009212 ENSDLAG00005030820 ENSDLAG00005030055 znf711 (ENSDLAG00005009224) ENSDLAG00005009227 ENSDLAG00005009232 ogt.2 (ENSDLAG00005009254) #22 gcna (ENSDLAG00005009546) ENSDLAG00005009584 znf185 (ENSDLAG00005009716) fut11 (ENSDLAG00005009787) ENSDLAG00005028079 plp1a (ENSDLAG00005033259) pcdh20 (ENSDLAG00005009827) si:dkey-27i16.2 (ENSDLAG00005029649) nlgn3a (ENSDLAG00005009835) #16 ENSDLAG00005010032 ENSDLAG00005015408 ENSDLAG00005015410 ENSDLAG00005015422 ENSDLAG00005031542 ENSDLAG00005034623 Large yellow croaker MODERN SPECIES irg1l (ENSLCRG00005011616) ENSLCRG00005011619 si:ch211-153b23.4 (ENSLCRG00005011620) si:ch211-153b23.5 (ENSLCRG00005011622) zgc:174917 (ENSLCRG00005011623) ENSLCRG00005011624 FRMPD3 (ENSLCRG00005011625) prps1b (ENSLCRG00005011629) SLC25A53 (ENSLCRG00005011649) ENSLCRG00005011651 zgc:66447 (ENSLCRG00005011652) znf711 (ENSLCRG00005011654) kctd12b (ENSLCRG00005011656) ENSLCRG00005011659 ENSLCRG00005011661 ogt.2 (ENSLCRG00005011686) #22 gcna (ENSLCRG00005013118) ENSLCRG00005013123 nsdhl (ENSLCRG00005013132) znf185 (ENSLCRG00005013137) fut11 (ENSLCRG00005013145) RAB9B (ENSLCRG00005013147) plp1a (ENSLCRG00005013148) pcdh20 (ENSLCRG00005013150) si:dkey-27i16.2 (ENSLCRG00005013152) nlgn3a (ENSLCRG00005013154) #16 ENSLCRG00005013180 eda (ENSLCRG00005014323) ENSLCRG00005014325 ENSLCRG00005014326 ENSLCRG00005014327 #17 Gilthead seabream MODERN SPECIES 9 irg1l (ENSSAUG00010015033) ENSSAUG00010015031 si:ch211-153b23.4 (ENSSAUG00010015029) si:ch211-153b23.5 (ENSSAUG00010015028) zgc:174917 (ENSSAUG00010015026) ENSSAUG00010015025 FRMPD3 (ENSSAUG00010015021) prps1b (ENSSAUG00010014928) SLC25A53 (ENSSAUG00010014926) ENSSAUG00010014925 zgc:66447 (ENSSAUG00010014907) znf711 (ENSSAUG00010014902) kctd12b (ENSSAUG00010014898) ENSSAUG00010014897 ENSSAUG00010014896 ogt.2 (ENSSAUG00010012772) #22 gcna (ENSSAUG00010012737) ENSSAUG00010012731 nsdhl (ENSSAUG00010012725) znf185 (ENSSAUG00010012719) fut11 (ENSSAUG00010012713) plp1a (ENSSAUG00010012709) pcdh20 (ENSSAUG00010012707) nlgn3a (ENSSAUG00010012651) #16 ENSSAUG00010011348 ENSSAUG00010011324 ENSSAUG00010011321 ENSSAUG00010011319 GJB1 (ENSSAUG00010011315) #17 gja2 (ENSSAUG00010011314) vma21 (ENSSAUG00010011312) Perciformes ANCESTRAL SPECIES 13 ENSGT00940000153941.a.b ENSGT00390000015700.b ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000157536.b ENSGT00940000163623 ENSGT00990000203874 ENSGT01030000234513.B.a.c #17 ENSGT01050000244864.B.a.g.b Perciformes_a ANCESTRAL SPECIES 11 ENSGT00940000155753 ENSGT00940000153941.a.b ENSGT00390000015700.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000157536.b ENSGT00940000163623 ENSGT01030000234513.B.a.c #17 ENSGT00990000203874 ENSGT01050000244864.B.a.g.b Pike perch MODERN SPECIES 36 si:ch211-153b23.4 (ENSSLUG00000019306) si:ch211-153b23.5 (ENSSLUG00000019305) si:ch211-153b23.5 (ENSSLUG00000019301) zgc:174917 (ENSSLUG00000019298) ENSSLUG00000019293 FRMPD3 (ENSSLUG00000019286) prps1b (ENSSLUG00000019265) SLC25A53 (ENSSLUG00000019262) ENSSLUG00000019259 ENSSLUG00000019256 zgc:66447 (ENSSLUG00000019252) znf711 (ENSSLUG00000019250) kctd12b (ENSSLUG00000019248) ENSSLUG00000019245 ENSSLUG00000019243 ogt.2 (ENSSLUG00000017060) #22 gcna (ENSSLUG00000016925) CETN1 (ENSSLUG00000016906) nsdhl (ENSSLUG00000016895) fut11 (ENSSLUG00000016879) RAB9B (ENSSLUG00000016875) plp1a (ENSSLUG00000016866) pcdh20 (ENSSLUG00000016856) nlgn3a (ENSSLUG00000016669) #16 ENSSLUG00000016500 eda (ENSSLUG00000016474) ENSSLUG00000016466 ENSSLUG00000016458 GJB1 (ENSSLUG00000016454) #17 gja2 (ENSSLUG00000016452) vma21 (ENSSLUG00000016449) Channel bull blenny MODERN SPECIES 1 irg1l (ENSCGOG00000013000) ENSCGOG00000013005 si:ch211-153b23.5 (ENSCGOG00000013011) si:ch211-153b23.4 (ENSCGOG00000013017) si:ch211-153b23.5 (ENSCGOG00000013034) zgc:174917 (ENSCGOG00000013085) ENSCGOG00000013087 FRMPD3 (ENSCGOG00000013090) prps1b (ENSCGOG00000013113) ENSCGOG00000013388 zgc:66447 (ENSCGOG00000013389) znf711 (ENSCGOG00000013391) kctd12b (ENSCGOG00000013393) ENSCGOG00000013395 ENSCGOG00000013398 ogt.2 (ENSCGOG00000013456) #22 gcna (ENSCGOG00000015117) CETN1 (ENSCGOG00000015120) nsdhl (ENSCGOG00000015133) fut11 (ENSCGOG00000015150) RAB9B (ENSCGOG00000015156) plp1a (ENSCGOG00000015159) pcdh20 (ENSCGOG00000015162) nlgn3a (ENSCGOG00000015164) #16 ENSCGOG00000015359 eda (ENSCGOG00000019741) ENSCGOG00000019742 ENSCGOG00000019743 ENSCGOG00000019745 #17 ENSCGOG00000019747 gja2 (ENSCGOG00000019749) Cottioidei ANCESTRAL SPECIES 9 ENSGT00940000155753 ENSGT00940000153941.a.b ENSGT00390000015700.b ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000178635 ENSGT00940000163623 ENSGT00990000203874 ENSGT01030000234513.B.a.c #17 Stickleback MODERN SPECIES 3 RLIM (ENSGACG00000018243) irg1l (ENSGACG00000018245) ENSGACG00000018246 si:ch211-153b23.5 (ENSGACG00000018249) irg1l (ENSGACG00000018250) ENSGACG00000018251 ENSGACG00000018252 si:ch211-153b23.4 (ENSGACG00000018253) si:ch211-153b23.5 (ENSGACG00000018254) FRMPD3 (ENSGACG00000018256) prps1b (ENSGACG00000018258) zgc:66447 (ENSGACG00000018263) znf711 (ENSGACG00000018264) kctd12b (ENSGACG00000018268) ENSGACG00000018271 ogt.2 (ENSGACG00000018273) #22 gcna (ENSGACG00000018279) ENSGACG00000018281 nsdhl (ENSGACG00000018285) ENSGACG00000018286 ENSGACG00000018287 fut11 (ENSGACG00000018289) RAB9B (ENSGACG00000018291) plp1a (ENSGACG00000018292) nlgn3a (ENSGACG00000018296) #16 vma21 (ENSGACG00000018298) ENSGACG00000018300 eda (ENSGACG00000018311) ENSGACG00000018312 ENSGACG00000018313 GJB1 (ENSGACG00000018314) #17 Lumpfish DUPLICATION Lumpfish MODERN SPECIES 1 irg1l (ENSCLMG00005018933) ENSCLMG00005018932 si:ch211-153b23.4 (ENSCLMG00005018931) si:ch211-153b23.5 (ENSCLMG00005018930) zgc:174917 (ENSCLMG00005018929) FRMPD3 (ENSCLMG00005018928) prps1b (ENSCLMG00005018907) SLC25A53 (ENSCLMG00005018906) ENSCLMG00005018905 ENSCLMG00005018904 zgc:66447 (ENSCLMG00005018903) znf711 (ENSCLMG00005018901) kctd12b (ENSCLMG00005018900) ENSCLMG00005018899 ENSCLMG00005018897 OGT (ENSCLMG00005017583) #22 gcna (ENSCLMG00005017570) CETN1 (ENSCLMG00005017569) nsdhl (ENSCLMG00005017568) fut11 (ENSCLMG00005017567) RAB9B (ENSCLMG00005017566) plp1a (ENSCLMG00005017564) ENSCLMG00005017562 nlgn3a (ENSCLMG00005017498) #16 ENSCLMG00005017494 eda (ENSCLMG00005017493) ENSCLMG00005017492 ENSCLMG00005017491 ENSCLMG00005017490 GJB1 (ENSCLMG00005017489) #17 ENSCLMG00005017488 Lumpfish MODERN SPECIES 18 stk33 (ENSCLMG00005010495) ENSCLMG00005010496 dennd2b (ENSCLMG00005003058) tmem9b (ENSCLMG00005006449) scube2 (ENSCLMG00005006464) sinhcafl (ENSCLMG00005007927) DENND5A (ENSCLMG00005007952) tmem41b (ENSCLMG00005008161) ipo7 (ENSCLMG00005008187) SWAP70 (ENSCLMG00005011020) SBF2 (ENSCLMG00005011620) adma (ENSCLMG00005013808) AMPD3 (ENSCLMG00005013809) ENSCLMG00005013813 IRAG1 (ENSCLMG00005013814) ENSCLMG00005013815 #22 eif4g2a (ENSCLMG00005013818) GALNT18 (ENSCLMG00005014422) pth1b (ENSCLMG00005014436) BTBD10 (ENSCLMG00005014438) RASSF10 (ENSCLMG00005014463) TEAD1 (ENSCLMG00005014465) MICAL2 (ENSCLMG00005014548) dkk3a (ENSCLMG00005014588) usp47 (ENSCLMG00005014622) CLEC3A (ENSCLMG00005017984) vat1l (ENSCLMG00005017985) bola3 (ENSCLMG00005017988) ENSCLMG00005017989 ENSCLMG00005017991 kars1 (ENSCLMG00005017994) Percomorphaceae_D ANCESTRAL SPECIES 17 ENSGT00390000015700.b ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT01090000261327 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000157536.b ENSGT00940000163623 ENSGT01030000234513.B.a.c #17 ENSGT00990000203874 Anabantaria ANCESTRAL SPECIES 15 ENSGT00390000015700.b ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT01090000261327 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000157536.b ENSGT01030000234513.B.a.c #17 ENSGT01050000244864.B.a.g.b ENSGT00390000017980 Anabantoidei ANCESTRAL SPECIES 11 ENSGT00390000015700.b ENSGT00390000015364.a.b.b ENSGT00390000003706.a.b.a ENSGT00390000015364.a.b.a ENSGT00390000001775.A ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT01090000261327 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000157536.b ENSGT01030000234513.B.a.c #17 ENSGT01050000244864.B.a.g.b ENSGT00390000017980 Climbing perch MODERN SPECIES 1 si:ch211-153b23.5 (ENSATEG00000005023) irg1l (ENSATEG00000005005) ENSATEG00000004956 si:ch211-153b23.4 (ENSATEG00000004948) zgc:174917 (ENSATEG00000004895) ENSATEG00000004880 ENSATEG00000030026 prps1b (ENSATEG00000004840) ENSATEG00000004833 ENSATEG00000027350 ENSATEG00000004802 znf711 (ENSATEG00000004795) ENSATEG00000025633 ENSATEG00000004769 ENSATEG00000004762 ogt.2 (ENSATEG00000004679) #22 gcna (ENSATEG00000004662) ENSATEG00000004635 nsdhl (ENSATEG00000004612) ENSATEG00000004560 fut11 (ENSATEG00000004526) ENSATEG00000004488 plp1a (ENSATEG00000004376) pcdh20 (ENSATEG00000026702) nlgn3a (ENSATEG00000004302) #16 ENSATEG00000004202 ENSATEG00000004177 ENSATEG00000004169 ENSATEG00000004162 ENSATEG00000004122 #17 ENSATEG00000004111 Siamese fighting fish MODERN SPECIES 1 NEXMIF (ENSBSLG00000017475) RLIM (ENSBSLG00000017450) glod5 (ENSBSLG00000017418) ENSBSLG00000017392 irg1l (ENSBSLG00000017329) si:ch211-153b23.5 (ENSBSLG00000017319) si:ch211-153b23.4 (ENSBSLG00000017292) ENSBSLG00000017250 FRMPD3 (ENSBSLG00000017173) prps1b (ENSBSLG00000016877) SLC25A53 (ENSBSLG00000016832) zgc:66447 (ENSBSLG00000016772) znf711 (ENSBSLG00000016704) ENSBSLG00000016639 ENSBSLG00000016604 ogt.2 (ENSBSLG00000015666) #22 gcna (ENSBSLG00000015594) CETN1 (ENSBSLG00000015546) nsdhl (ENSBSLG00000015537) ENSBSLG00000015505 fut11 (ENSBSLG00000015483) RAB9B (ENSBSLG00000015469) plp1a (ENSBSLG00000015439) ENSBSLG00000015429 nlgn3a (ENSBSLG00000015214) #16 ENSBSLG00000013445 eda (ENSBSLG00000012232) ENSBSLG00000012216 ENSBSLG00000012188 ENSBSLG00000012174 #17 gja2 (ENSBSLG00000012168) Zig-zag eel MODERN SPECIES 1 irg1l (ENSMAMG00000009264) si:ch211-153b23.4 (ENSMAMG00000028589) si:ch211-153b23.5 (ENSMAMG00000009307) si:ch211-153b23.4 (ENSMAMG00000028420) zgc:174917 (ENSMAMG00000009376) ENSMAMG00000009390 ENSMAMG00000009404 prps1b (ENSMAMG00000009443) ENSMAMG00000026059 ENSMAMG00000009474 ENSMAMG00000009504 znf711 (ENSMAMG00000009511) ENSMAMG00000027307 ENSMAMG00000009546 ENSMAMG00000009557 ogt.2 (ENSMAMG00000009570) #22 gcna (ENSMAMG00000009732) ENSMAMG00000026087 nsdhl (ENSMAMG00000009765) ENSMAMG00000009887 fut11 (ENSMAMG00000009921) ENSMAMG00000009927 plp1a (ENSMAMG00000009933) nlgn3a (ENSMAMG00000009983) #16 ENSMAMG00000009994 ENSMAMG00000010032 ENSMAMG00000010044 ENSMAMG00000010061 ENSMAMG00000027664 ENSMAMG00000026915 #17 ENSMAMG00000010072 Carangaria ANCESTRAL SPECIES 15 ENSGT00940000153941.a.b ENSGT00390000015700.b ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000157536.b ENSGT00940000163623 ENSGT01030000234513.B.a.c #17 ENSGT00990000203874 Pleuronectoidei ANCESTRAL SPECIES 18 ENSGT00390000015700.b ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000163331.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000157536.b ENSGT00940000163623 ENSGT00940000164773 ENSGT00990000203874 Tongue sole MODERN SPECIES 6 ENSCSEG00000013162 ENSCSEG00000013173 ENSCSEG00000013641 smim19 (ENSCSEG00000013653) gpr137 (ENSCSEG00000013658) ENSCSEG00000013672 smad5 (ENSCSEG00000013682) ap1ar (ENSCSEG00000013704) cfap100 (ENSCSEG00000013721) gabra4 (ENSCSEG00000013726) ENSCSEG00000013764 GUF1 (ENSCSEG00000014139) PIGG (ENSCSEG00000014182) rhogc (ENSCSEG00000014213) ENSCSEG00000014273 ogt.2 (ENSCSEG00000014290) #22 ENSCSEG00000014333 gcna (ENSCSEG00000014345) ENSCSEG00000014351 nsdhl (ENSCSEG00000014361) ENSCSEG00000014380 fut11 (ENSCSEG00000014454) RAB9B (ENSCSEG00000014467) plp1a (ENSCSEG00000014478) pcdh20 (ENSCSEG00000014493) si:dkey-27i16.2 (ENSCSEG00000014502) nlgn3a (ENSCSEG00000014513) #16 ENSCSEG00000014528 ENSCSEG00000014538 ENSCSEG00000014559 ENSCSEG00000014572 Turbot MODERN SPECIES 4 RLIM (ENSSMAG00000021649) irg1l (ENSSMAG00000005426) si:ch211-153b23.4 (ENSSMAG00000010067) si:ch211-153b23.5 (ENSSMAG00000026559) zgc:174917 (ENSSMAG00000010101) ENSSMAG00000010107 ENSSMAG00000021809 ENSSMAG00000037060 prps1b (ENSSMAG00000006157) ENSSMAG00000006167 ENSSMAG00000006169 znf711 (ENSSMAG00000006184) ENSSMAG00000006216 ENSSMAG00000006225 ENSSMAG00000006354 ogt.2 (ENSSMAG00000006384) #22 gcna (ENSSMAG00000006436) ENSSMAG00000006470 nsdhl (ENSSMAG00000006484) znf185 (ENSSMAG00000006559) fut11 (ENSSMAG00000006664) ENSSMAG00000006709 plp1a (ENSSMAG00000006722) pcdh20 (ENSSMAG00000006730) nlgn3a (ENSSMAG00000006752) #16 ENSSMAG00000006809 ENSSMAG00000006887 ENSSMAG00000006904 ENSSMAG00000006908 ENSSMAG00000006920 #17 ENSSMAG00000006914 Carangaria_A ANCESTRAL SPECIES 22 ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000175313 ENSGT00940000163331.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000157536.b ENSGT00940000178635 ENSGT00940000163623 ENSGT01030000234513.B.a.c #17 ENSGT01090000260989 Barramundi perch MODERN SPECIES 63 glod5 (ENSLCAG00010015102) irg1l (ENSLCAG00010015095) si:ch211-153b23.4 (ENSLCAG00010015092) si:ch211-153b23.5 (ENSLCAG00010015088) zgc:174917 (ENSLCAG00010015082) ENSLCAG00010015080 FRMPD3 (ENSLCAG00010015073) prps1b (ENSLCAG00010014997) SLC25A53 (ENSLCAG00010014971) zgc:66447 (ENSLCAG00010014969) znf711 (ENSLCAG00010014964) kctd12b (ENSLCAG00010014961) ENSLCAG00010014958 ENSLCAG00010014957 ENSLCAG00010014953 ogt.2 (ENSLCAG00010013834) #22 gcna (ENSLCAG00010013564) CETN1 (ENSLCAG00010013538) nsdhl (ENSLCAG00010013521) fut11 (ENSLCAG00010013506) RAB9B (ENSLCAG00010013498) plp1a (ENSLCAG00010013493) ENSLCAG00010013486 nlgn3a (ENSLCAG00010013448) #16 ENSLCAG00010011546 eda (ENSLCAG00010011194) ENSLCAG00010011191 ENSLCAG00010011189 GJB1 (ENSLCAG00010011188) #17 ENSLCAG00010011186 gja2 (ENSLCAG00010011184) Seriola ANCESTRAL SPECIES 22 ENSGT00390000015364.a.b.b.h ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A.z ENSGT00390000015364.a.b.b.g ENSGT00390000001775.A.y ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00940000163673 ENSGT00940000163331.b ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.a ENSGT00730000111220 ENSGT00940000157536.b ENSGT01030000234513.B.a.c #17 ENSGT01090000260989 ENSGT01050000244864.B.a.g.b ENSGT00390000017980 Greater amberjack MODERN SPECIES 67 ENSSDUG00000006736 si:ch211-153b23.4 (ENSSDUG00000006842) si:ch211-153b23.4 (ENSSDUG00000006931) si:ch211-153b23.5 (ENSSDUG00000006945) zgc:174917 (ENSSDUG00000006969) ENSSDUG00000006987 FRMPD3 (ENSSDUG00000007008) ENSSDUG00000007075 prps1b (ENSSDUG00000007153) SLC25A53 (ENSSDUG00000007182) zgc:66447 (ENSSDUG00000007193) znf711 (ENSSDUG00000007222) kctd12b (ENSSDUG00000007262) rhogd (ENSSDUG00000007281) ENSSDUG00000007366 ogt.2 (ENSSDUG00000007400) #22 gcna (ENSSDUG00000007521) CETN1 (ENSSDUG00000007535) nsdhl (ENSSDUG00000007548) fut11 (ENSSDUG00000007566) RAB9B (ENSSDUG00000007575) plp1a (ENSSDUG00000007588) pcdh20 (ENSSDUG00000007612) si:dkey-27i16.2 (ENSSDUG00000007622) nlgn3a (ENSSDUG00000007632) #16 ENSSDUG00000007657 eda (ENSSDUG00000007706) ENSSDUG00000007712 ENSSDUG00000007729 ENSSDUG00000007743 #17 ENSSDUG00000007750 Yellowtail amberjack DUPLICATION Yellowtail amberjack MODERN SPECIES 2508 FRMPD3 (ENSSLDG00000008778) ENSSLDG00000008899 SLC25A53 (ENSSLDG00000008923) zgc:66447 (ENSSLDG00000008947) znf711 (ENSSLDG00000008965) kctd12b (ENSSLDG00000008983) rhogd (ENSSLDG00000009003) ENSSLDG00000009143 ENSSLDG00000009182 #22 OGT (ENSSLDG00000009201) #22 gcna (ENSSLDG00000009267) CETN1 (ENSSLDG00000009289) nsdhl (ENSSLDG00000009308) fut11 (ENSSLDG00000009332) RAB9B (ENSSLDG00000009351) plp1a (ENSSLDG00000009374) pcdh20 (ENSSLDG00000009388) si:dkey-27i16.2 (ENSSLDG00000009398) nlgn3a (ENSSLDG00000009428) #16 ENSSLDG00000009501 eda (ENSSLDG00000009617) ENSSLDG00000009633 ENSSLDG00000009650 ENSSLDG00000009668 Yellowtail amberjack MODERN SPECIES 2508 FRMPD3 (ENSSLDG00000008778) ENSSLDG00000008899 SLC25A53 (ENSSLDG00000008923) zgc:66447 (ENSSLDG00000008947) znf711 (ENSSLDG00000008965) kctd12b (ENSSLDG00000008983) rhogd (ENSSLDG00000009003) ENSSLDG00000009143 ENSSLDG00000009182 #22 OGT (ENSSLDG00000009201) #22 gcna (ENSSLDG00000009267) CETN1 (ENSSLDG00000009289) nsdhl (ENSSLDG00000009308) fut11 (ENSSLDG00000009332) RAB9B (ENSSLDG00000009351) plp1a (ENSSLDG00000009374) pcdh20 (ENSSLDG00000009388) si:dkey-27i16.2 (ENSSLDG00000009398) nlgn3a (ENSSLDG00000009428) #16 ENSSLDG00000009501 eda (ENSSLDG00000009617) ENSSLDG00000009633 ENSSLDG00000009650 ENSSLDG00000009668 GJB1 (ENSSLDG00000009687) #17 Otomorpha ANCESTRAL SPECIES 34 ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT00510000046908.b ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00940000159611 ENSGT00390000017860.a.a ENSGT00940000176232 ENSGT00940000161713 ENSGT00950000182803.B.d.a.n ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000175313 ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.b.b ENSGT00710000106792 ENSGT00950000182972.a.a.a.a.a.e ENSGT00940000166874 ENSGT00390000010669 ENSGT00940000153404.a Otophysi ANCESTRAL SPECIES 10 ENSGT00390000006413 ENSGT00940000161050 ENSGT00950000182810.B.a ENSGT00940000155973.a ENSGT00940000164374.B.c.a.c ENSGT00940000159358 ENSGT00530000063113.C ENSGT00940000159044 ENSGT00940000157079.a ENSGT01100000263630 ENSGT00940000164256 ENSGT00940000162861 ENSGT00390000009871 ENSGT00390000008738 ENSGT00940000175313 ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.b.b ENSGT00710000106792 ENSGT00390000012030.b.a ENSGT00940000161737 ENSGT00940000155902.c ENSGT00940000160087 Characiphysae ANCESTRAL SPECIES 21 ENSGT00950000182810.B.a.pb ENSGT00940000155973.a ENSGT00940000164374.B.c.a.c ENSGT00940000159358 ENSGT00530000063113.C ENSGT00940000159044 ENSGT00940000157079.a ENSGT01100000263630 ENSGT00940000164256 ENSGT00940000162861 ENSGT00390000009871 ENSGT00390000008738 ENSGT00940000175313.d ENSGT00940000163331.a.a ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.b.b.c.a ENSGT00710000106792 ENSGT00390000012030.b.a ENSGT00950000183097.a.a.a.f ENSGT00940000155374.g.b ENSGT00940000161737 Channel catfish MODERN SPECIES 27 btk (ENSIPUG00000017071) timm8a (ENSIPUG00000017056) npy7r (ENSIPUG00000017051) trim105 (ENSIPUG00000017043) flt4 (ENSIPUG00000016925) ergic1 (ENSIPUG00000016915) DUSP1 (ENSIPUG00000016901) neurl1b (ENSIPUG00000016888) ENSIPUG00000016880 spink2.1 (ENSIPUG00000016871) uvssa (ENSIPUG00000016843) nkx1-1 (ENSIPUG00000016832) ccdc142 (ENSIPUG00000016798) slbp (ENSIPUG00000016780) ENSIPUG00000016753 ogt (ENSIPUG00000016652) #22 gcna (ENSIPUG00000016622) cetn2 (ENSIPUG00000016606) Nsdhl (ENSIPUG00000016585) fut11 (ENSIPUG00000016572) RAB9B (ENSIPUG00000016561) plp1 (ENSIPUG00000016532) pcdh20 (ENSIPUG00000016521) si:dkey-27i16.2 (ENSIPUG00000016503) nlgn3 (ENSIPUG00000016441) #16 gria3b (ENSIPUG00000016359) thoc2 (ENSIPUG00000015876) magt1 (ENSIPUG00000015833) pls3 (ENSIPUG00000015787) cnga2 (ENSIPUG00000015732) nup62 (ENSIPUG00000015683) Characiphysae_b ANCESTRAL SPECIES 16 ENSGT00950000182810.B.a.pb ENSGT00940000155973.a ENSGT00940000164374.B.c.a.c ENSGT00940000159358 ENSGT00530000063113.C ENSGT00940000159044 ENSGT00940000157079.a ENSGT01100000263630 ENSGT00940000164256 ENSGT00940000162861 ENSGT00390000009871 ENSGT00390000008738 ENSGT00940000175313.d ENSGT00940000163331.a.a ENSGT00940000155128.a.a.b ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00980000200584 ENSGT00940000159580 #16 ENSGT00940000156123.b.b.c.a ENSGT00940000156123.b.b.d ENSGT00710000106792 ENSGT00390000012030.b.a ENSGT00950000183097.a.a.a.f Electric eel MODERN SPECIES 125 immt (ENSEEEG00000009482) rnf103 (ENSEEEG00000009479) mxd3 (ENSEEEG00000009478) prelid1a (ENSEEEG00000009476) trim105 (ENSEEEG00000009472) flt4 (ENSEEEG00000008806) ergic1 (ENSEEEG00000008765) dusp1 (ENSEEEG00000008760) neurl1b (ENSEEEG00000008759) spink2.1 (ENSEEEG00000008758) uvssa (ENSEEEG00000008757) nkx1.2lb (ENSEEEG00000008755) ENSEEEG00000008754 slbp (ENSEEEG00000008751) ENSEEEG00000008747 ogt.2 (ENSEEEG00000008703) #22 gcna (ENSEEEG00000008697) CETN1 (ENSEEEG00000008694) nsdhl (ENSEEEG00000008690) fut11 (ENSEEEG00000008687) RAB9B (ENSEEEG00000008684) plp1a (ENSEEEG00000008683) ENSEEEG00000008682 nlgn3a (ENSEEEG00000008648) #16 gria3b (ENSEEEG00000008563) Characoidei ANCESTRAL SPECIES 47 ENSGT00390000006413 ENSGT00940000161050 ENSGT00950000182810.B.a.pb ENSGT00940000155973.a ENSGT00940000164374.B.c.a.c ENSGT00940000159358 ENSGT00530000063113.C ENSGT00940000159044 ENSGT00940000157079.a ENSGT01100000263813 ENSGT00940000164256 ENSGT00940000162861 ENSGT00390000009871 ENSGT00390000008738 ENSGT00940000175313.d ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00980000200584 ENSGT00940000159580 #16 ENSGT00940000156123.b.b.c.a ENSGT00940000156123.b.b.d ENSGT00710000106792 ENSGT00390000012030.b.a ENSGT00950000183097.a.a.a.f ENSGT00940000155374.g.b Red-bellied piranha MODERN SPECIES 202 rnf103 (ENSPNAG00000018903) mxd3 (ENSPNAG00000018875) prelid1a (ENSPNAG00000018865) npy7r (ENSPNAG00000018847) trim105 (ENSPNAG00000018841) flt4 (ENSPNAG00000018827) ergic1 (ENSPNAG00000018763) dusp1 (ENSPNAG00000018718) neurl1b (ENSPNAG00000018699) spink2.5 (ENSPNAG00000018655) uvssa (ENSPNAG00000018627) nkx1.2lb (ENSPNAG00000003538) ENSPNAG00000018576 slbp (ENSPNAG00000018503) ENSPNAG00000018486 ogt.2 (ENSPNAG00000018441) #22 gcna (ENSPNAG00000018298) CETN1 (ENSPNAG00000018273) nsdhl (ENSPNAG00000018242) znf185 (ENSPNAG00000018214) fut11 (ENSPNAG00000018166) RAB9B (ENSPNAG00000018132) plp1a (ENSPNAG00000018120) pcdh20 (ENSPNAG00000018105) ENSPNAG00000018094 nlgn3a (ENSPNAG00000018058) #16 Mexicana tetra MODERN SPECIES 16 pttg1 (ENSAMXG00000007324) ENSAMXG00000035984 prelid1a (ENSAMXG00000038989) npy7r (ENSAMXG00000026043) trim105 (ENSAMXG00000032694) flt4 (ENSAMXG00000001322) ergic1 (ENSAMXG00000038323) dusp1 (ENSAMXG00000036546) neurl1b (ENSAMXG00000005988) spink2.5 (ENSAMXG00000032095) uvssa (ENSAMXG00000005976) nkx1.2lb (ENSAMXG00000031090) ENSAMXG00000036953 slbp (ENSAMXG00000014527) ENSAMXG00000043364 ogt.2 (ENSAMXG00000014461) #22 gcna (ENSAMXG00000014405) CETN1 (ENSAMXG00000014391) nsdhl (ENSAMXG00000035191) ENSAMXG00000041568 fut11 (ENSAMXG00000029401) RAB9B (ENSAMXG00000026476) plp1a (ENSAMXG00000034949) pcdh20 (ENSAMXG00000039440) si:dkey-27i16.2 (ENSAMXG00000039878) nlgn3a (ENSAMXG00000014280) #16 gria3b (ENSAMXG00000007563) ENSAMXG00000041409 thoc2 (ENSAMXG00000014184) magt1 (ENSAMXG00000014146) pls3 (ENSAMXG00000014093) Cyprinoidei ANCESTRAL SPECIES 74 ENSGT00390000006413 ENSGT00940000161050 ENSGT00950000182810.B.a ENSGT00940000155973.a ENSGT00940000164374.B.c.a.c ENSGT00940000159358 ENSGT00530000063113.C ENSGT00940000159044 ENSGT00940000157079.a.a ENSGT01100000263630 ENSGT00940000164256 ENSGT00940000162861 ENSGT00390000009871 ENSGT00390000008738 ENSGT00940000175313 ENSGT00940000155085 #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00530000063872.A.e ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580 #16 ENSGT00940000156123.b.b ENSGT00710000106792 ENSGT00390000012030.b.a ENSGT00940000161737 ENSGT00940000155902.c ENSGT00940000160087 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 817 ENSGT00950000183201.b.b.b.a.d ENSGT00950000182915.a.a.a.e ENSGT00940000156526.a.k ENSGT00390000002781.j ENSGT00390000006124 ENSGT00950000182881.a.b.a.b.z.b ENSGT00940000175313.a ENSGT00940000155085.o #22 Goldfish MODERN SPECIES 5 PCDH12 (ENSCARG00000054278) LTC4S (ENSCARG00000054244) MAML1 (ENSCARG00000054236) canx (ENSCARG00000053318) ENSCARG00000053270 mgat4b (ENSCARG00000051850) sqstm1 (ENSCARG00000051762) mrnip (ENSCARG00000051678) tcirg1b (ENSCARG00000051475) ENSCARG00000051436 ENSCARG00000051425 ENSCARG00000051413 gcna (ENSCARG00000051388) ENSCARG00000051339 nsdhl (ENSCARG00000051281) OGT (ENSCARG00000050943) #22 znf185 (ENSCARG00000050911) fut11 (ENSCARG00000050803) RAB9B (ENSCARG00000050781) plp1a (ENSCARG00000050766) pcdh20 (ENSCARG00000050763) nlgn3a (ENSCARG00000050749) #16 Cyprininae_a ANCESTRAL SPECIES 163 ENSGT00940000161050.d ENSGT00390000006413.a ENSGT00390000002313.o ENSGT00390000016876.d ENSGT00920000149138.t ENSGT00940000153662.A.c ENSGT00940000160403.a ENSGT00940000160738.k ENSGT00950000183201.b.b.b.a.d ENSGT00950000182915.a.a.a.e ENSGT00940000156526.a.k ENSGT00390000002781.j ENSGT00390000006124 ENSGT00950000182881.a.b.a.b.z.b.e ENSGT00940000175313.a ENSGT00940000155085.o #22 ENSGT00440000040163.g ENSGT00940000157209.gb.b ENSGT00940000158229 ENSGT00530000063872.A.e.a.a ENSGT00940000158983.b ENSGT00940000160481.d.b ENSGT00390000006915.c.d.a.b ENSGT00940000167495.a ENSGT00390000011709.jb ENSGT00940000159580.l.a #16 ENSGT00940000156123.b.b.a ENSGT00710000106792.w ENSGT00390000012030.b.a.m ENSGT00950000183097.a.a.a.f.c.b.a ENSGT00940000155374.g.b Common carp reference MODERN SPECIES 20 rnf103 (ENSCCRG00000018411) immt (ENSCCRG00000018425) ptcd3 (ENSCCRG00000057359) POLR1A (ENSCCRG00000019390) ENSCCRG00000036478 prpf19 (ENSCCRG00000043650) ENSCCRG00000026194 LTC4S (ENSCCRG00000071139) ENSCCRG00000059543 canx (ENSCCRG00000026659) mgat4b (ENSCCRG00000026672) sqstm1 (ENSCCRG00000010030) tcirg1b (ENSCCRG00000064394) ENSCCRG00000010165 ENSCCRG00000057286 ENSCCRG00000069100 #22 ENSCCRG00000078359 gcna (ENSCCRG00000040991) ENSCCRG00000020804 nsdhl (ENSCCRG00000040771) znf185 (ENSCCRG00000056891) fut11 (ENSCCRG00000077531) ENSCCRG00000020827 plp1a (ENSCCRG00000020822) si:dkey-27i16.2 (ENSCCRG00000072796) nlgn3a (ENSCCRG00000074546) #16 gria3b (ENSCCRG00000012134) ENSCCRG00000067836 magt1 (ENSCCRG00000006406) ENSCCRG00000034328 ENSCCRG00000034296 Golden-line barbel MODERN SPECIES 508 prpf19 (ENSSGRG00000043684) PCDH12 (ENSSGRG00000043680) itln3 (ENSSGRG00000043613) ENSSGRG00000043610 canx (ENSSGRG00000043608) mgat4b (ENSSGRG00000043409) ENSSGRG00000043401 ENSSGRG00000043400 tcirg1b (ENSSGRG00000043334) ENSSGRG00000043328 OGT (ENSSGRG00000043116) #22 gcna (ENSSGRG00000043088) CETN1 (ENSSGRG00000043058) nsdhl (ENSSGRG00000043036) znf185 (ENSSGRG00000043032) fut11 (ENSSGRG00000043030) RAB9B (ENSSGRG00000043029) plp1a (ENSSGRG00000043028) pcdh20 (ENSSGRG00000043026) nlgn3a (ENSSGRG00000042939) #16 Cyprininae ANCESTRAL SPECIES 149 ENSGT00940000165542 ENSGT00940000159795.d ENSGT00920000149123.d.b.b ENSGT00940000163331.a.b ENSGT00940000163673 ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00390000017860.a.a.c ENSGT00940000159611.i ENSGT00950000183035.a.a.v ENSGT00510000046908.b.a.b ENSGT00390000001775.A.h ENSGT00390000003706.a.b.a.b ENSGT00390000015364.a.b.a.d ENSGT00940000175313.b ENSGT00940000155085.p #22 ENSGT00440000040163 ENSGT00940000157209.gb.b ENSGT00940000158229 ENSGT00530000063872.A.e.a.a ENSGT00940000158983.b ENSGT00940000160481.d.b ENSGT00390000006915.c.d.a.b ENSGT00940000167495.a ENSGT00940000159580.l.a #16 ENSGT00940000156123.b.b.a ENSGT00710000106792.w ENSGT00390000012030.b.a.m ENSGT00950000183097.a.a.a.f.c.b.a ENSGT00940000155374.g.b ENSGT00940000161737.g Goldfish MODERN SPECIES 5 hdac3 (ENSCARG00000012404) ENSCARG00000012563 hspa9 (ENSCARG00000012578) ENSCARG00000012692 kctd12b (ENSCARG00000012696) ENSCARG00000012705 zgc:66447 (ENSCARG00000012814) znf711 (ENSCARG00000012821) FRMPD3 (ENSCARG00000012830) ENSCARG00000012848 ENSCARG00000012851 zgc:174917 (ENSCARG00000012858) si:ch211-153b23.5 (ENSCARG00000001967) si:ch211-153b23.4 (ENSCARG00000001981) ENSCARG00000002011 OGT (ENSCARG00000002204) #22 gcna (ENSCARG00000002495) ENSCARG00000002502 nsdhl (ENSCARG00000002526) znf185 (ENSCARG00000002530) fut11 (ENSCARG00000002536) RAB9B (ENSCARG00000002549) plp1a (ENSCARG00000002574) pcdh20 (ENSCARG00000002579) nlgn3a (ENSCARG00000002624) #16 gria3b (ENSCARG00000003144) ENSCARG00000003171 rnf20 (ENSCARG00000003215) aldob (ENSCARG00000003332) ENSCARG00000003384 maea (ENSCARG00000003399) Cyprininae_a ANCESTRAL SPECIES 590 ENSGT00950000182881.a.b.a.b.z.b.f ENSGT00940000175313.b ENSGT00940000155085.p #22 ENSGT00530000063872.A.e.a.b ENSGT00940000158983.a ENSGT00940000160481.d.a.a ENSGT00390000006915.c.d.a.a ENSGT00940000167495.b ENSGT00940000159580.k #16 ENSGT00940000159580.l.b #16 Common carp reference MODERN SPECIES 35 POLR1A (ENSCCRG00000026214) prpf19 (ENSCCRG00000025301) ENSCCRG00000068406 itln3 (ENSCCRG00000026551) LTC4S (ENSCCRG00000026637) ENSCCRG00000026642 canx (ENSCCRG00000009938) mgat4b (ENSCCRG00000026864) mrnip (ENSCCRG00000073326) sqstm1 (ENSCCRG00000032351) ENSCCRG00000071448 tcirg1b (ENSCCRG00000010051) ENSCCRG00000075512 ENSCCRG00000034557 ENSCCRG00000047247 ENSCCRG00000074983 #22 gcna (ENSCCRG00000001814) ENSCCRG00000060509 nsdhl (ENSCCRG00000064398) znf185 (ENSCCRG00000001843) fut11 (ENSCCRG00000001853) ENSCCRG00000075104 plp1a (ENSCCRG00000016164) nlgn3a (ENSCCRG00000059667) #16 ENSCCRG00000034396 gria3b (ENSCCRG00000012151) ENSCCRG00000061908 magt1 (ENSCCRG00000023290) ENSCCRG00000072929 ENSCCRG00000028954 ENSCCRG00000080990 Golden-line barbel MODERN SPECIES 1147 tcirg1b (ENSSGRG00000010386) ENSSGRG00000010389 ENSSGRG00000010390 OGT (ENSSGRG00000010397) #22 gcna (ENSSGRG00000010697) CETN1 (ENSSGRG00000010701) fut11 (ENSSGRG00000010711) RAB9B (ENSSGRG00000010718) plp1a (ENSSGRG00000010719) pcdh20 (ENSSGRG00000010721) ENSSGRG00000010725 #16 Zebrafish DUPLICATION Zebrafish MODERN SPECIES 5 ENSDARG00000113299 ENSDARG00000102868 ENSDARG00000099673 ENSDARG00000103336 ENSDARG00000099689 ENSDARG00000102271 spink2.2 (ENSDARG00000103833) spink2.1 (ENSDARG00000102076) uvssa (ENSDARG00000100916) nkx1.2lb (ENSDARG00000099427) ENSDARG00000117200 ENSDARG00000101377 slbp (ENSDARG00000100558) si:dkey-102m7.3 (ENSDARG00000100366) ENSDARG00000099767 ogt.1 (ENSDARG00000105243) #22 ogt.2 (ENSDARG00000099455) #22 gcna (ENSDARG00000101060) CETN1 (ENSDARG00000101510) nsdhl (ENSDARG00000099315) znf185 (ENSDARG00000103917) fut11 (ENSDARG00000102402) RAB9B (ENSDARG00000103391) plp1a (ENSDARG00000103732) pcdh20 (ENSDARG00000101910) si:dkey-27i16.2 (ENSDARG00000098293) nlgn3a (ENSDARG00000104786) #16 rraga (ENSDARG00000104149) cnga2a (ENSDARG00000102968) pls3 (ENSDARG00000037655) ENSDARG00000104572 Zebrafish MODERN SPECIES 5 ENSDARG00000102868 ENSDARG00000099673 ENSDARG00000103336 ENSDARG00000099689 ENSDARG00000102271 spink2.2 (ENSDARG00000103833) spink2.1 (ENSDARG00000102076) uvssa (ENSDARG00000100916) nkx1.2lb (ENSDARG00000099427) ENSDARG00000117200 ENSDARG00000101377 slbp (ENSDARG00000100558) si:dkey-102m7.3 (ENSDARG00000100366) ENSDARG00000099767 ogt.1 (ENSDARG00000105243) #22 ogt.2 (ENSDARG00000099455) #22 gcna (ENSDARG00000101060) CETN1 (ENSDARG00000101510) nsdhl (ENSDARG00000099315) znf185 (ENSDARG00000103917) fut11 (ENSDARG00000102402) RAB9B (ENSDARG00000103391) plp1a (ENSDARG00000103732) pcdh20 (ENSDARG00000101910) si:dkey-27i16.2 (ENSDARG00000098293) nlgn3a (ENSDARG00000104786) #16 rraga (ENSDARG00000104149) cnga2a (ENSDARG00000102968) pls3 (ENSDARG00000037655) ENSDARG00000104572 gria3b (ENSDARG00000037498) Clupeiformes ANCESTRAL SPECIES 11 ENSGT00390000015700.b ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT01030000234752 ENSGT00950000183035.a.a ENSGT00940000159611 ENSGT00390000017860.a.a ENSGT00940000176232 ENSGT00940000161713 ENSGT00950000182803.B.d.a.n ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000175313 ENSGT00940000155085 #22 ENSGT00950000182810.B.a ENSGT00940000161050 Denticle herring MODERN SPECIES 9 ENSDCDG00000008996 si:ch211-153b23.4 (ENSDCDG00000008982) si:ch211-153b23.5 (ENSDCDG00000008976) zgc:174917 (ENSDCDG00000008971) ENSDCDG00000008962 ENSDCDG00000008957 FRMPD3 (ENSDCDG00000008931) znf711 (ENSDCDG00000008904) zgc:66447 (ENSDCDG00000008890) tmsb1 (ENSDCDG00000008884) SLC25A53 (ENSDCDG00000008881) prps1b (ENSDCDG00000008868) kctd12b (ENSDCDG00000008866) ENSDCDG00000008865 ENSDCDG00000008864 ogt.2 (ENSDCDG00000005917) #22 prelid1a (ENSDCDG00000005678) mxd3 (ENSDCDG00000005673) ENSDCDG00000005663 ENSDCDG00000005657 ENSDCDG00000032198 ENSDCDG00000032197 cryba1l1 (ENSDCDG00000032196) smtnl1 (ENSDCDG00000032194) slc43a3b (ENSDCDG00000032193) ENSDCDG00000032192 rtn4rl2b (ENSDCDG00000032191) WFS1 (ENSDCDG00000032188) JAKMIP1 (ENSDCDG00000031884) ELP1 (ENSDCDG00000031438) TBC1D2 (ENSDCDG00000031410) Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 12 cysltr1 (ENSCHAG00000015042) ENSCHAG00000015048 LPAR4 (ENSCHAG00000015058) ENSCHAG00000015106 ENSCHAG00000015474 pcdh18b (ENSCHAG00000015521) pcdh10b (ENSCHAG00000015532) smim19 (ENSCHAG00000015568) SLC25A53 (ENSCHAG00000015590) SLC25A53 (ENSCHAG00000015615) SLC25A53 (ENSCHAG00000015637) prps1b (ENSCHAG00000015645) kctd12b (ENSCHAG00000015700) ENSCHAG00000015719 ENSCHAG00000015725 OGT (ENSCHAG00000015769) #22 prelid1a (ENSCHAG00000016943) mxd3 (ENSCHAG00000016960) ENSCHAG00000002398 ENSCHAG00000002447 ENSCHAG00000002468 OGT (ENSCHAG00000002535) #22 ENSCHAG00000003158 shisa3 (ENSCHAG00000003171) atp8a1 (ENSCHAG00000003258) GRXCR1 (ENSCHAG00000005130) slc30a9 (ENSCHAG00000005202) ENSCHAG00000006915 SLC16A2 (ENSCHAG00000009228) ENSCHAG00000009234 SEC24B (ENSCHAG00000009286) Atlantic herring MODERN SPECIES 12 pcdh10b (ENSCHAG00000015532) smim19 (ENSCHAG00000015568) SLC25A53 (ENSCHAG00000015590) SLC25A53 (ENSCHAG00000015615) SLC25A53 (ENSCHAG00000015637) prps1b (ENSCHAG00000015645) kctd12b (ENSCHAG00000015700) ENSCHAG00000015719 ENSCHAG00000015725 OGT (ENSCHAG00000015769) #22 prelid1a (ENSCHAG00000016943) mxd3 (ENSCHAG00000016960) ENSCHAG00000002398 ENSCHAG00000002447 ENSCHAG00000002468 OGT (ENSCHAG00000002535) #22 ENSCHAG00000003158 shisa3 (ENSCHAG00000003171) atp8a1 (ENSCHAG00000003258) GRXCR1 (ENSCHAG00000005130) slc30a9 (ENSCHAG00000005202) ENSCHAG00000006915 SLC16A2 (ENSCHAG00000009228) ENSCHAG00000009234 SEC24B (ENSCHAG00000009286) hopx (ENSCHAG00000012041) arl9 (ENSCHAG00000012068) SRP72 (ENSCHAG00000012091) ENSCHAG00000012533 ENSCHAG00000012634 ENSCHAG00000012741 Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 391 ENSGT00940000163331.a.a ENSGT00940000155128.a.a.b ENSGT00940000155085.u #22 ENSGT00440000040163 ENSGT00940000157209 ENSGT00940000158229 ENSGT00940000158983 ENSGT00940000160481 ENSGT00390000006915.c.d.a ENSGT00940000167495 ENSGT00940000159580.i #16 ENSGT00940000153251.b.a P. kingsleyae MODERN SPECIES 128 ENSPKIG00000013581 PCDH1 (ENSPKIG00000013631) kctd12b (ENSPKIG00000013680) ENSPKIG00000013706 znf711 (ENSPKIG00000013756) KCNK4 (ENSPKIG00000013825) ENSPKIG00000013952 zgc:162144 (ENSPKIG00000014001) stx5al (ENSPKIG00000014020) ENSPKIG00000014119 dnajc4 (ENSPKIG00000014195) nudt22 (ENSPKIG00000014224) adssl (ENSPKIG00000014244) ENSPKIG00000014274 ENSPKIG00000014294 ogt.2 (ENSPKIG00000014362) #22 gcna (ENSPKIG00000014504) CETN1 (ENSPKIG00000014551) nsdhl (ENSPKIG00000014584) fut11 (ENSPKIG00000014605) RAB9B (ENSPKIG00000014623) plp1a (ENSPKIG00000014656) ENSPKIG00000014691 nlgn3a (ENSPKIG00000014734) #16 ENSPKIG00000014814 Asian bonytongue MODERN SPECIES 4 irg1l (ENSSFOG00015010923) ENSSFOG00015010910 si:ch211-153b23.4 (ENSSFOG00015010891) si:ch211-153b23.5 (ENSSFOG00015010870) zgc:174917 (ENSSFOG00015010860) ENSSFOG00015010855 FRMPD3 (ENSSFOG00015031494) prps1b (ENSSFOG00015010815) SLC25A53 (ENSSFOG00015010808) zgc:66447 (ENSSFOG00015010781) znf711 (ENSSFOG00015010753) ENSSFOG00015010729 ENSSFOG00015010721 ENSSFOG00015026205 ENSSFOG00015010699 OGT (ENSSFOG00015010641) #22 gcna (ENSSFOG00015010601) ENSSFOG00015010573 nsdhl (ENSSFOG00015010564) fut11 (ENSSFOG00015010501) RAB9B (ENSSFOG00015010492) plp1a (ENSSFOG00015010391) ENSSFOG00015024545 ENSSFOG00015025083 nlgn3a (ENSSFOG00015010352) #16 ENSSFOG00015010325 ENSSFOG00015027889 gria3b (ENSSFOG00015010240) thoc2 (ENSSFOG00015010127) STAG2 (ENSSFOG00015009962) xiap (ENSSFOG00015009941) Osteoglossiformes ANCESTRAL SPECIES 22 ENSGT00940000155753.w ENSGT00940000153941.a.b ENSGT00940000168152 ENSGT00390000015700.b ENSGT00390000015364.a.b.b ENSGT00390000015364.a.b.a.a ENSGT00390000003706.a.b.a ENSGT00390000001775.A ENSGT00510000046908.b ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a ENSGT00390000017860.a.a.b ENSGT00940000159611.e ENSGT00940000163673 ENSGT00940000163331.a.b ENSGT00940000155085.v #22 ENSGT00940000155242 #21 ENSGT00940000163331.b ENSGT00390000006915.c.d.b ENSGT00940000159580.j #16 ENSGT00940000156123.b ENSGT00710000106792.y ENSGT00950000182972.a.a.a.a.a.e.g ENSGT00940000166874 ENSGT00940000153404.a ENSGT00940000156381 ENSGT00940000157427.j ENSGT00510000047029 #26 ENSGT00940000165959 ENSGT00940000159460 ENSGT00940000156837 #27 Asian bonytongue MODERN SPECIES 19 pls3 (ENSSFOG00015003740) fgf16 (ENSSFOG00015003812) ATRX (ENSSFOG00015003832) MAGT1 (ENSSFOG00015030430) NEXMIF (ENSSFOG00015003895) RLIM (ENSSFOG00015024426) si:ch211-153b23.4 (ENSSFOG00015003920) ENSSFOG00015003952 prps1a (ENSSFOG00015003981) tmsb1 (ENSSFOG00015029849) ENSSFOG00015004050 znf711 (ENSSFOG00015004064) kctd12b (ENSSFOG00015004112) taf1 (ENSSFOG00015004159) #21 ENSSFOG00015030568 OGT (ENSSFOG00015004499) #22 plp1b (ENSSFOG00015004596) nlgn3a (ENSSFOG00015004656) #16 GRIA3 (ENSSFOG00015004701) THOC2 (ENSSFOG00015004767) STAG2 (ENSSFOG00015004879) acsl4b (ENSSFOG00015004988) MID2 (ENSSFOG00015005025) ENSSFOG00015029870 ENSSFOG00015005072 ENSSFOG00015005100 ppm1nb (ENSSFOG00015005140) rtn2b (ENSSFOG00015032049) RAB4B (ENSSFOG00015005173) ARHGAP35 (ENSSFOG00015005210) ENSSFOG00015026092 Spotted gar MODERN SPECIES 673 ENSLOCG00000014894 znf711 (ENSLOCG00000014891) zgc:66447 (ENSLOCG00000014887) prps1a (ENSLOCG00000014886) FRMPD3 (ENSLOCG00000014883) ENSLOCG00000014879 zgc:174917 (ENSLOCG00000014875) si:ch211-153b23.5 (ENSLOCG00000014872) ENSLOCG00000014871 glod5 (ENSLOCG00000014868) ENSLOCG00000014861 kctd12b (ENSLOCG00000014860) taf1 (ENSLOCG00000014847) #21 rhogc (ENSLOCG00000017483) ENSLOCG00000014845 ogt.2 (ENSLOCG00000014832) #22 gcna (ENSLOCG00000014829) nsdhl (ENSLOCG00000014825) ENSLOCG00000014821 RAB9B (ENSLOCG00000017482) plp1a (ENSLOCG00000014819) ENSLOCG00000014816 si:dkey-27i16.2 (ENSLOCG00000014814) nlgn3a (ENSLOCG00000014807) #16 ENSLOCG00000014805 LONRF3 (ENSLOCG00000014802) commd5 (ENSLOCG00000014798) fam199x (ENSLOCG00000014795) ENSLOCG00000014793 il1rapl2 (ENSLOCG00000014790) ENSLOCG00000014782 Reedfish MODERN SPECIES 3 SLC25A53 (ENSECRG00000011877) prps1a (ENSECRG00000011890) ENSECRG00000011910 ENSECRG00000011926 ENSECRG00000011951 FRMPD3 (ENSECRG00000011975) ENSECRG00000012009 ENSECRG00000012021 si:ch211-153b23.4 (ENSECRG00000012043) ENSECRG00000012069 kctd12b (ENSECRG00000012093) taf1 (ENSECRG00000012267) #21 rhogc (ENSECRG00000012566) ENSECRG00000012581 ENSECRG00000012602 ogt.2 (ENSECRG00000012648) #22 gcna (ENSECRG00000012738) CETN1 (ENSECRG00000012769) nsdhl (ENSECRG00000012787) ENSECRG00000012855 fut11 (ENSECRG00000012903) RAB9B (ENSECRG00000012916) plp1a (ENSECRG00000012923) pcdh20 (ENSECRG00000012940) nlgn3a (ENSECRG00000012975) #16 psmd10 (ENSECRG00000013012) nxt2 (ENSECRG00000013031) ENSECRG00000013042 ACSL4 (ENSECRG00000013064) ENSECRG00000013094 ENSECRG00000013269 Elephant shark MODERN SPECIES 1753 NOP53 (ENSCMIG00000009226) rhogd (ENSCMIG00000009235) taf1 (ENSCMIG00000009318) #21 ogt.2 (ENSCMIG00000009661) #22 ENSCMIG00000009948 ENSCMIG00000009949 TEX11 (ENSCMIG00000009955) #10 DLG3 (ENSCMIG00000010220) #9 rab41 (ENSCMIG00000010984) P2RY4 (ENSCMIG00000011011) nlgn3a (ENSCMIG00000011019) #16 ENSCMIG00000011041 ENSCMIG00000011042 KIF4B (ENSCMIG00000011051) #7 ENSCMIG00000011063 pdzd11 (ENSCMIG00000011068) stard10 (ENSCMIG00000011074) med12 (ENSCMIG00000011148) #15 efnb1 (ENSCMIG00000011276)