Mus_A	ANCESTRAL SPECIES	17	ENSGT00390000002237 #7	ENSGT00940000156886.D #8	ENSGT00940000158474 #9	ENSGT00950000182980.a.a #10	ENSGT00390000005524 #11	ENSGT01020000230346.C.d.m #12	ENSGT00940000157960 #13	ENSGT00390000002211 #14	ENSGT00390000004917 #15	ENSGT00940000155937 #16	ENSGT00940000156816 #17	ENSGT00940000156613 #18	ENSGT00440000038430 #19	ENSGT00940000155613 #20	ENSGT00390000014113 #21	ENSGT00940000156147 #22	ENSGT01100000263537.b.b.c.a.b #23	ENSGT00390000003303 #24	ENSGT00940000158937 #25	ENSGT00940000156671 #26	ENSGT00940000159392 #27	ENSGT00940000156726.e #28	ENSGT00940000156510 #29	ENSGT00390000007020 #30	ENSGT00940000154482.b.b.b #31	ENSGT00940000154618 #32	ENSGT00940000164869	ENSGT00940000158221 #33	ENSGT00390000010423.rb	ENSGT00390000008624	ENSGT00390000004599
Mus_B	ANCESTRAL SPECIES	17	ENSGT00390000002237 #7	ENSGT00940000156886.D #8	ENSGT00940000158474 #9	ENSGT00950000182980.a.a #10	ENSGT00390000005524 #11	ENSGT01020000230346.C.d.m #12	ENSGT00940000157960 #13	ENSGT00390000002211 #14	ENSGT00390000004917 #15	ENSGT00940000155937 #16	ENSGT00940000156816 #17	ENSGT00940000156613 #18	ENSGT00440000038430 #19	ENSGT00940000155613 #20	ENSGT00390000014113 #21	ENSGT00940000156147 #22	ENSGT01100000263537.b.b.c.a.b #23	ENSGT00390000003303 #24	ENSGT00940000158937 #25	ENSGT00940000156671 #26	ENSGT00940000159392 #27	ENSGT00940000156726.e #28	ENSGT00940000156510 #29	ENSGT00390000007020 #30	ENSGT00940000154482.b.b.b #31	ENSGT00940000154618 #32	ENSGT00940000164869	ENSGT00940000158221 #33	ENSGT00390000010423.rb	ENSGT00390000008624	ENSGT00390000004599
Mouse	MODERN SPECIES	3	Dglucy (ENSMUSG00000021185) #7	Rps6ka5 (ENSMUSG00000021180) #8	Ttc7b (ENSMUSG00000033530) #9	Calm1 (ENSMUSG00000001175) #10	Nrde2 (ENSMUSG00000021179) #11	Psmc1 (ENSMUSG00000021178) #12	Kcnk13 (ENSMUSG00000045404) #13	Tdp1 (ENSMUSG00000021177) #14	Efcab11 (ENSMUSG00000021176) #15	Foxn3 (ENSMUSG00000033713) #16	Ttc8 (ENSMUSG00000021013) #17	Eml5 (ENSMUSG00000051166) #18	Zc3h14 (ENSMUSG00000021012) #19	Ptpn21 (ENSMUSG00000021009) #20	Spata7 (ENSMUSG00000021007) #21	Kcnk10 (ENSMUSG00000033854) #22	Gpr65 (ENSMUSG00000021886) #23	Galc (ENSMUSG00000021003) #24	Flrt2 (ENSMUSG00000047414) #25	Sel1l (ENSMUSG00000020964) #26	Ston2 (ENSMUSG00000020961) #27	Gtf2a1 (ENSMUSG00000020962) #28	Tshr (ENSMUSG00000020963) #29	Cep128 (ENSMUSG00000061533) #30	Dio2 (ENSMUSG00000007682) #31	Nrxn3 (ENSMUSG00000066392) #32	Adck1 (ENSMUSG00000021044) #33	Eif1ad15 (ENSMUSG00000093847) #34	Eif1ad7 (ENSMUSG00000079029) #35	Eif1ad10 (ENSMUSG00000095799) #36	Pramel51 (ENSMUSG00000066027) #37
Mus_C	ANCESTRAL SPECIES	11	ENSGT00390000002237 #7	ENSGT00940000156886.D #8	ENSGT00940000158474 #9	ENSGT00950000182980.a.a #10	ENSGT00390000005524 #11	ENSGT01020000230346.C.d.m #12	ENSGT00940000157960 #13	ENSGT00390000002211 #14	ENSGT00390000004917 #15	ENSGT00940000155937 #16	ENSGT00940000156816 #17	ENSGT00940000156613 #18	ENSGT00440000038430 #19	ENSGT00940000155613 #20	ENSGT00390000014113 #21	ENSGT00940000156147 #22	ENSGT01100000263537.b.b.c.a.b #23	ENSGT00390000003303 #24	ENSGT00940000158937 #25	ENSGT00940000156671 #26	ENSGT00940000159392 #27	ENSGT00940000156726.e #28	ENSGT00940000156510 #29	ENSGT00390000007020 #30	ENSGT00940000154482.b.b.b #31	ENSGT00940000154618 #32	ENSGT00940000164869	ENSGT00940000158221 #33	ENSGT00390000010423.rb	ENSGT00390000008624	ENSGT00390000004599
Steppe mouse	MODERN SPECIES	3327	ENSMSIG00000010275	ENSMSIG00000010228 #10	Nrde2 (ENSMSIG00000010143) #11	Psmc1 (ENSMSIG00000010112) #12	Kcnk13 (ENSMSIG00000010094) #13	Tdp1 (ENSMSIG00000010016) #14	Efcab11 (ENSMSIG00000009995) #15	ENSMSIG00000009991	ENSMSIG00000009976	Foxn3 (ENSMSIG00000009934) #16	Ttc8 (ENSMSIG00000009819) #17	Eml5 (ENSMSIG00000009261) #18	Zc3h14 (ENSMSIG00000009025) #19	Ptpn21 (ENSMSIG00000008940) #20	Spata7 (ENSMSIG00000008658) #21	Kcnk10 (ENSMSIG00000008496) #22	Gpr65 (ENSMSIG00000008478) #23	Galc (ENSMSIG00000008359) #24	ENSMSIG00000008330
spretus	MODERN SPECIES	3	Dglucy (MGP_SPRETEiJ_G0018869) #7	Rps6ka5 (MGP_SPRETEiJ_G0018868) #8	Ttc7b (MGP_SPRETEiJ_G0018867) #9	MGP_SPRETEiJ_G0018866 #10	Nrde2 (MGP_SPRETEiJ_G0018865) #11	Psmc1 (MGP_SPRETEiJ_G0018864) #12	Kcnk13 (MGP_SPRETEiJ_G0018863) #13	Tdp1 (MGP_SPRETEiJ_G0018862) #14	Efcab11 (MGP_SPRETEiJ_G0018861) #15	MGP_SPRETEiJ_G0018860 #16	Ttc8 (MGP_SPRETEiJ_G0018859) #17	Eml5 (MGP_SPRETEiJ_G0018858) #18	MGP_SPRETEiJ_G0018857 #19	Ptpn21 (MGP_SPRETEiJ_G0018856) #20	Spata7 (MGP_SPRETEiJ_G0018855) #21	Kcnk10 (MGP_SPRETEiJ_G0018854) #22	Gpr65 (MGP_SPRETEiJ_G0018853) #23	Galc (MGP_SPRETEiJ_G0018852) #24	Flrt2 (MGP_SPRETEiJ_G0018851) #25	Sel1l (MGP_SPRETEiJ_G0018850) #26	Gtf2a1 (MGP_SPRETEiJ_G0018848) #28	Tshr (MGP_SPRETEiJ_G0018847) #29	Cep128 (MGP_SPRETEiJ_G0018846) #30	MGP_SPRETEiJ_G0018845 #31	Nrxn3 (MGP_SPRETEiJ_G0018844) #32	Adck1 (MGP_SPRETEiJ_G0018843) #33	MGP_SPRETEiJ_G0018842 ##34	Snw1 (MGP_SPRETEiJ_G0018841)	Slirp (MGP_SPRETEiJ_G0018840)	Alkbh1 (MGP_SPRETEiJ_G0018839)	Sptlc2 (MGP_SPRETEiJ_G0018838)
Ryukyu mouse	MODERN SPECIES	3	Dglucy (MGP_CAROLIEiJ_G0018024) #7	MGP_CAROLIEiJ_G0018023 #8	Ttc7b (MGP_CAROLIEiJ_G0018022) #9	MGP_CAROLIEiJ_G0018021 #10	Nrde2 (MGP_CAROLIEiJ_G0018020) #11	Psmc1 (MGP_CAROLIEiJ_G0018019) #12	Kcnk13 (MGP_CAROLIEiJ_G0018018) #13	Tdp1 (MGP_CAROLIEiJ_G0018017) #14	Efcab11 (MGP_CAROLIEiJ_G0018016) #15	Foxn3 (MGP_CAROLIEiJ_G0018015) #16	Ttc8 (MGP_CAROLIEiJ_G0018014) #17	Eml5 (MGP_CAROLIEiJ_G0018013) #18	Zc3h14 (MGP_CAROLIEiJ_G0018012) #19	Ptpn21 (MGP_CAROLIEiJ_G0018011) #20	Spata7 (MGP_CAROLIEiJ_G0018010) #21	Kcnk10 (MGP_CAROLIEiJ_G0018009) #22	Gpr65 (MGP_CAROLIEiJ_G0018008) #23	Galc (MGP_CAROLIEiJ_G0018007) #24	Flrt2 (MGP_CAROLIEiJ_G0018006) #25	Sel1l (MGP_CAROLIEiJ_G0018005) #26	Ston2 (MGP_CAROLIEiJ_G0018004) #27	Gtf2a1 (MGP_CAROLIEiJ_G0018003) #28	Tshr (MGP_CAROLIEiJ_G0018002) #29	Cep128 (MGP_CAROLIEiJ_G0018001) #30	MGP_CAROLIEiJ_G0018000 #31	Nrxn3 (MGP_CAROLIEiJ_G0017999) #32	Adck1 (MGP_CAROLIEiJ_G0017998) #33	MGP_CAROLIEiJ_G0017997	Snw1 (MGP_CAROLIEiJ_G0017996)	Slirp (MGP_CAROLIEiJ_G0017995)	Sptlc2 (MGP_CAROLIEiJ_G0017993)