Euarchontoglires	ANCESTRAL SPECIES		ENSGT00940000160958 #7	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000154955.e.b ##12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a #26	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958 #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00940000163644	ENSGT00390000001017 #32	ENSGT00940000154557.c.a #35	ENSGT00940000154557.c.b ##35	ENSGT00940000165936	ENSGT00940000163351
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00940000160958 #7	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000154955.e.b ##12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a #26	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958 #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00940000154557.c.a #35	ENSGT00940000163351	ENSGT00950000182931.A #36	ENSGT00950000183117.a.b #37	ENSGT01030000234578.B.b
Glires	ANCESTRAL SPECIES		ENSGT00940000160958 #7	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000154955.e.b ##12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a #26	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958 #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00940000154557.c.a #35	ENSGT00950000182931.A #36	ENSGT00950000183117.a.b #37	ENSGT01030000234578.B.b	ENSGT00390000017353
Rodentia	ANCESTRAL SPECIES		ENSGT00940000160958 #7	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000154955.e.b ##12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.g #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a #26	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958 #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00940000154557.c.a #35	ENSGT00950000182931.A #36	ENSGT00950000183117.a.b #37	ENSGT01030000234578.B.b	ENSGT00390000017353
Rodentia_B	ANCESTRAL SPECIES		ENSGT00390000018096	ENSGT00940000160958 #7	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.g #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a #26	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958 #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00940000154557.c.a #35	ENSGT00950000182931.A #36	ENSGT00950000183117.a.b #37	ENSGT01030000234578.B.b	ENSGT00390000017353
Myomorpha	ANCESTRAL SPECIES	12	ENSGT00390000018096	ENSGT00940000160958 #7	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.g.a.a #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a #26	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958 #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00940000154557.c.a.d #35	ENSGT00950000182931.A #36	ENSGT00950000183117.a.b #37	ENSGT01030000234578.B.b	ENSGT00390000017353
Muroidea	ANCESTRAL SPECIES	6	ENSGT00390000018096	ENSGT00940000160958 #7	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.g.a.a #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a #26	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958 #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00940000154557.c.a.d #35	ENSGT00950000182931.A #36	ENSGT00950000183117.a.b #37	ENSGT01030000234578.B.b	ENSGT00390000017353
Muroidea_A	ANCESTRAL SPECIES	5	ENSGT00940000160958 #7	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.g.a.a #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT01090000262147	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a #26	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958 #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00940000154557.c.a.d.a.b #33	ENSGT00940000154557.c.a.c #34	ENSGT00940000154557.c.a.d.a.a ##35	ENSGT00940000154557.c.a.d.b #35	ENSGT00950000182931.A #36
Murinae	ANCESTRAL SPECIES	5	ENSGT00940000160958 #7	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.g.a.a #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT01090000262147	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a #26	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958 #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00940000154557.c.a.d.a.b #33	ENSGT00940000154557.c.a.c #34	ENSGT00940000154557.c.a.d.a.a ##35	ENSGT00940000154557.c.a.d.b #35	ENSGT00950000182931.A #36
Mus	ANCESTRAL SPECIES	7	ENSGT00940000160958 #7	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.g.a.a #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT01090000262147	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a #26	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958 #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00940000154557.c.a.d.a.b #33	ENSGT00940000154557.c.a.c #34	ENSGT00940000154557.c.a.d.a.a ##35	ENSGT00940000154557.c.a.d.b #35	ENSGT00950000182931.A #36
Mus_A	ANCESTRAL SPECIES	9	ENSGT00940000160958 #7	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.g.a.a #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT01090000262147	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a #26	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958 #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00940000154557.c.a.d.a.b #33	ENSGT00940000154557.c.a.c #34	ENSGT00940000154557.c.a.d.a.a ##35	ENSGT00940000154557.c.a.d.b #35	ENSGT00950000182931.A #36
Mus_B	ANCESTRAL SPECIES	8	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.g.a.a #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT01090000262147	ENSGT01090000262870 #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a #26	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958 #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00940000154557.c.a.d.a.b #33	ENSGT00940000154557.c.a.c #34	ENSGT00940000154557.c.a.d.a.a.c.a ##35	ENSGT00940000154557.c.a.d.a.a.d ##35	ENSGT00940000154557.c.a.d.b #35
Mus_C	ANCESTRAL SPECIES	6	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.g.a.a #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT01090000262147	ENSGT01090000262870 #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a #26	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958 #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00940000154557.c.a.d.a.b #33	ENSGT00940000154557.c.a.c #34	ENSGT00940000154557.c.a.d.b #35	ENSGT00950000182931.A #36	ENSGT00950000183117.a.b #37
spretus	MODERN SPECIES	12	Ptpn22 (MGP_SPRETEiJ_G0026407) #7	Rsbn1 (MGP_SPRETEiJ_G0026408) #8	Phtf1 (MGP_SPRETEiJ_G0026409) #9	Magi3 (MGP_SPRETEiJ_G0026410) #10	Lrig2 (MGP_SPRETEiJ_G0026411) #11	Slc16a1 (MGP_SPRETEiJ_G0026412) #12	Tafa3 (MGP_SPRETEiJ_G0026413) #13	Ppm1j (MGP_SPRETEiJ_G0026414) #14	Rhoc (MGP_SPRETEiJ_G0026415) #15	Mov10 (MGP_SPRETEiJ_G0026416) #16	Capza1 (MGP_SPRETEiJ_G0026417) #17	St7l (MGP_SPRETEiJ_G0026418) #18	Wnt2b (MGP_SPRETEiJ_G0026419) #19	Cttnbp2nl (MGP_SPRETEiJ_G0026420) #20	MGP_SPRETEiJ_G0026421 #21	Kcnd3 (MGP_SPRETEiJ_G0026422) #22	Ddx20 (MGP_SPRETEiJ_G0026423) #23	Inka2 (MGP_SPRETEiJ_G0026424) #24	Rap1a (MGP_SPRETEiJ_G0026425) #25	MGP_SPRETEiJ_G0026426 #26	Tmigd3 (MGP_SPRETEiJ_G0026427) #27	I830077J02Rik (MGP_SPRETEiJ_G0026428) #28	Atp5pb (MGP_SPRETEiJ_G0026429) #29	Wdr77 (MGP_SPRETEiJ_G0026430) #30	Ovgp1 (MGP_SPRETEiJ_G0026431) #31	Pifo (MGP_SPRETEiJ_G0026432) #32	Chil5 (MGP_SPRETEiJ_G0026433) #33	Chia1 (MGP_SPRETEiJ_G0026434) #34	Chil6 (MGP_SPRETEiJ_G0026436) #35	Dennd2d (MGP_SPRETEiJ_G0026437) #36	Cept1 (MGP_SPRETEiJ_G0026438) #37
Steppe mouse	MODERN SPECIES	2708																Kcnd3 (ENSMSIG00000005944) #22	Ddx20 (ENSMSIG00000005900) #23	Inka2 (ENSMSIG00000005873) #24	Rap1a (ENSMSIG00000005828) #25	Adora3 (ENSMSIG00000005809) #26	Tmigd3 (ENSMSIG00000005765) #27	I830077J02Rik (ENSMSIG00000005744) #28	ENSMSIG00000005701 #29	Wdr77 (ENSMSIG00000005672) #30	Ovgp1 (ENSMSIG00000005625) #31	Pifo (ENSMSIG00000005553) #32	Chil5 (ENSMSIG00000005504) #33	ENSMSIG00000005488	Chia1 (ENSMSIG00000005457) #34	Chil3 (ENSMSIG00000005424) ##35	Chil4 (ENSMSIG00000005364) ##35
Mouse	MODERN SPECIES	12	Bcl2l15 (ENSMUSG00000044165)	Ptpn22 (ENSMUSG00000027843) #7	Rsbn1 (ENSMUSG00000044098) #8	Phtf1 (ENSMUSG00000058388) #9	Magi3 (ENSMUSG00000052539) #10	Lrig2 (ENSMUSG00000032913) #11	Slc16a1 (ENSMUSG00000032902) #12	Tafa3 (ENSMUSG00000055865) #13	Ppm1j (ENSMUSG00000002228) #14	Rhoc (ENSMUSG00000002233) #15	Mov10 (ENSMUSG00000002227) #16	Capza1 (ENSMUSG00000070372) #17	St7l (ENSMUSG00000045576) #18	Wnt2b (ENSMUSG00000027840) #19	Cttnbp2nl (ENSMUSG00000062127) #20	Kcnd3 (ENSMUSG00000040896) #22	Ddx20 (ENSMUSG00000027905) #23	Inka2 (ENSMUSG00000048458) #24	Rap1a (ENSMUSG00000068798) #25	Adora3 (ENSMUSG00000000562) #26	Tmigd3 (ENSMUSG00000074344) #27	I830077J02Rik (ENSMUSG00000074342) #28	Atp5pb (ENSMUSG00000000563) #29	Wdr77 (ENSMUSG00000000561) #30	Ovgp1 (ENSMUSG00000074340) #31	Pifo (ENSMUSG00000010136) #32	Chil5 (ENSMUSG00000043873) #33	Chia1 (ENSMUSG00000062778) #34	Chil3 (ENSMUSG00000040809) ##35	Chil4 (ENSMUSG00000063779) ##35	Chil6 (ENSMUSG00000027902) #35
Ryukyu mouse	MODERN SPECIES	12	Ptpn22 (MGP_CAROLIEiJ_G0025458) #7	Rsbn1 (MGP_CAROLIEiJ_G0025459) #8	Phtf1 (MGP_CAROLIEiJ_G0025460) #9	Magi3 (MGP_CAROLIEiJ_G0025461) #10	Lrig2 (MGP_CAROLIEiJ_G0025462) #11	Slc16a1 (MGP_CAROLIEiJ_G0025463) #12	Tafa3 (MGP_CAROLIEiJ_G0025464) #13	Ppm1j (MGP_CAROLIEiJ_G0025465) #14	Rhoc (MGP_CAROLIEiJ_G0025466) #15	Mov10 (MGP_CAROLIEiJ_G0025467) #16	Capza1 (MGP_CAROLIEiJ_G0025468) #17	St7l (MGP_CAROLIEiJ_G0025469) #18	Wnt2b (MGP_CAROLIEiJ_G0025470) #19	Cttnbp2nl (MGP_CAROLIEiJ_G0025471) #20	MGP_CAROLIEiJ_G0025472	Kcnd3 (MGP_CAROLIEiJ_G0025473) #22	Ddx20 (MGP_CAROLIEiJ_G0025474) #23	Inka2 (MGP_CAROLIEiJ_G0025475) #24	Rap1a (MGP_CAROLIEiJ_G0025476) #25	Adora3 (MGP_CAROLIEiJ_G0025477) #26	Tmigd3 (MGP_CAROLIEiJ_G0025478) #27	I830077J02Rik (MGP_CAROLIEiJ_G0025479) #28	Atp5pb (MGP_CAROLIEiJ_G0025480) #29	Wdr77 (MGP_CAROLIEiJ_G0025481) #30	Ovgp1 (MGP_CAROLIEiJ_G0025482) #31	Pifo (MGP_CAROLIEiJ_G0025483) #32	Chil5 (MGP_CAROLIEiJ_G0025484) #33	Chia1 (MGP_CAROLIEiJ_G0025485) #34	Chil6 (MGP_CAROLIEiJ_G0025486) #35	Dennd2d (MGP_CAROLIEiJ_G0025487) #36	Cept1 (MGP_CAROLIEiJ_G0025488) #37
Shrew mouse	MODERN SPECIES	17	MGP_PahariEiJ_G0026903	Rsbn1 (MGP_PahariEiJ_G0026904) #8	Phtf1 (MGP_PahariEiJ_G0026905) #9	Magi3 (MGP_PahariEiJ_G0026906) #10	Lrig2 (MGP_PahariEiJ_G0026907) #11	Slc16a1 (MGP_PahariEiJ_G0026908) #12	Tafa3 (MGP_PahariEiJ_G0026909) #13	Ppm1j (MGP_PahariEiJ_G0026910) #14	Rhoc (MGP_PahariEiJ_G0026911) #15	Mov10 (MGP_PahariEiJ_G0026912) #16	Capza1 (MGP_PahariEiJ_G0026913) #17	St7l (MGP_PahariEiJ_G0026914) #18	Wnt2b (MGP_PahariEiJ_G0026915) #19	Cttnbp2nl (MGP_PahariEiJ_G0026916) #20	MGP_PahariEiJ_G0026917 #21	Kcnd3 (MGP_PahariEiJ_G0026918) #22	Ddx20 (MGP_PahariEiJ_G0026919) #23	Inka2 (MGP_PahariEiJ_G0026920) #24	Rap1a (MGP_PahariEiJ_G0026921) #25	Adora3 (MGP_PahariEiJ_G0026922) #26	Tmigd3 (MGP_PahariEiJ_G0026923) #27	I830077J02Rik (MGP_PahariEiJ_G0026924) #28	Atp5pb (MGP_PahariEiJ_G0026925) #29	Wdr77 (MGP_PahariEiJ_G0026926) #30	Ovgp1 (MGP_PahariEiJ_G0026927) #31	Pifo (MGP_PahariEiJ_G0026928) #32	Chil5 (MGP_PahariEiJ_G0026929) #33	Chia1 (MGP_PahariEiJ_G0026930) #34	Chil6 (MGP_PahariEiJ_G0026932) #35	Dennd2d (MGP_PahariEiJ_G0026933) #36	Cept1 (MGP_PahariEiJ_G0026934) #37
Rat	MODERN SPECIES	11	Magi3 (ENSRNOG00000019885) #10	AABR07012763.1 (ENSRNOG00000057707)	Rplp0l1 (ENSRNOG00000031358)	Lrig2 (ENSRNOG00000019957) #11	Slc16a1 (ENSRNOG00000019996) #12	Tafa3 (ENSRNOG00000030253) #13	Ppm1j (ENSRNOG00000012481) #14	Rhoc (ENSRNOG00000012630) #15	Mov10 (ENSRNOG00000012946) #16	Capza1 (ENSRNOG00000013538) ##17	St7l (ENSRNOG00000014002) #18	Wnt2b (ENSRNOG00000014385) #19	Cttnbp2nl (ENSRNOG00000014479) #20	ENSRNOG00000068611	ENSRNOG00000066674	Kcnd3 (ENSRNOG00000014686) #22	Ddx20 (ENSRNOG00000015274) #23	Inka2 (ENSRNOG00000015691) #24	Rap1a (ENSRNOG00000032463) #25	Tmigd3 (ENSRNOG00000043375) #27	Adora3 (ENSRNOG00000015788) #26	C2h1orf162 (ENSRNOG00000070434) #28	Atp5pb (ENSRNOG00000064742) #29	Wdr77 (ENSRNOG00000016394) #30	Pifo (ENSRNOG00000016842) #32	AABR07012788.1 (ENSRNOG00000051068) #33	Prdx1l1 (ENSRNOG00000017695)	Chia (ENSRNOG00000033162) #34	ENSRNOG00000067768 ##35	Chi3l3 (ENSRNOG00000037115) ##35	RGD1309110 (ENSRNOG00000017574) #35
Cricetidae	ANCESTRAL SPECIES	6	ENSGT00940000160958 #7	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.g.a.a #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT01090000262147	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a #26	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958 #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00940000154557.c.a.d.a.b #33	ENSGT00940000154557.c.a.c #34	ENSGT00940000154557.c.a.d.a.a ##35	ENSGT00940000154557.c.a.d.b #35	ENSGT00950000182931.A #36
Cricetidae_B	ANCESTRAL SPECIES	3	ENSGT00390000018096	ENSGT00940000160958 #7	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.g.a.a #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a #26	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958 #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00940000154557.c.a.d.a.b #33	ENSGT00940000154557.c.a.d.a.a ##35	ENSGT00940000154557.c.a.d.b #35	ENSGT00950000182931.A #36	ENSGT00950000183117.a.b #37
Northern American deer mouse	MODERN SPECIES	19	Bcl2l15 (ENSPEMG00000022471)	Ptpn22 (ENSPEMG00000026650) #7	Rsbn1 (ENSPEMG00000020974) #8	Phtf1 (ENSPEMG00000022049) #9	Magi3 (ENSPEMG00000021592) #10	Lrig2 (ENSPEMG00000023837) #11	Slc16a1 (ENSPEMG00000012987) #12	Tafa3 (ENSPEMG00000019797) #13	Ppm1j (ENSPEMG00000019596) #14	Rhoc (ENSPEMG00000019894) #15	Mov10 (ENSPEMG00000007910) #16	ENSPEMG00000011887 ##17	St7l (ENSPEMG00000019718) #18	Wnt2b (ENSPEMG00000026096) #19	Cttnbp2nl (ENSPEMG00000025093) #20	Kcnd3 (ENSPEMG00000020087) #22	Ddx20 (ENSPEMG00000019595) #23	Inka2 (ENSPEMG00000025785) #24	Rap1a (ENSPEMG00000030241) #25	Adora3 (ENSPEMG00000019889) #26	Tmigd3 (ENSPEMG00000019932) #27	I830077J02Rik (ENSPEMG00000019698) #28	ENSPEMG00000020053 #29	Wdr77 (ENSPEMG00000019900) #30	ENSPEMG00000019924 #31	Pifo (ENSPEMG00000000041) #32	Chil5 (ENSPEMG00000019959) #33	ENSPEMG00000007488 ##35	ENSPEMG00000012567 ##35	Chil6 (ENSPEMG00000022931) #35	ENSPEMG00000027700
Prairie vole	MODERN SPECIES	143	ENSMOCG00000015941 #7	Rsbn1 (ENSMOCG00000005658) #8	Phtf1 (ENSMOCG00000001641) #9	Magi3 (ENSMOCG00000012680) #10	ENSMOCG00000019954	Lrig2 (ENSMOCG00000001665) #11	Slc16a1 (ENSMOCG00000016724) #12	Tafa3 (ENSMOCG00000016194) #13	Ppm1j (ENSMOCG00000011058) #14	Rhoc (ENSMOCG00000013270) #15	Mov10 (ENSMOCG00000007110) #16	Capza1 (ENSMOCG00000007375) #17	St7l (ENSMOCG00000020030) #18	Wnt2b (ENSMOCG00000013588) #19	Cttnbp2nl (ENSMOCG00000014559) #20	Kcnd3 (ENSMOCG00000019614) #22	Ddx20 (ENSMOCG00000012954) #23	Inka2 (ENSMOCG00000012240) #24	Rap1a (ENSMOCG00000002767) #25	Adora3 (ENSMOCG00000009194) #26	I830077J02Rik (ENSMOCG00000001066) #28	ENSMOCG00000018208 #29	Wdr77 (ENSMOCG00000000531) #30	Ovgp1 (ENSMOCG00000007897) #31	Pifo (ENSMOCG00000007744) #32	Chil5 (ENSMOCG00000016005) #33	ENSMOCG00000016226	ENSMOCG00000000112	ENSMOCG00000013098 #34
Cricetinae	ANCESTRAL SPECIES	12	ENSGT00940000160958 #7	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.g.a.a #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT01090000262147	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a #26	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958 #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00940000154557.c.a.d.a.b #33	ENSGT00940000154557.c.a.c #34	ENSGT00940000154557.c.a.d.a.a ##35	ENSGT00940000154557.c.a.d.b #35	ENSGT00950000182931.A #36
Chinese hamster chok1gshd	MODERN SPECIES	66	Phtf1 (ENSCGRG00001000594) #9	Magi3 (ENSCGRG00001019918) #10	ENSCGRG00001012904	Lrig2 (ENSCGRG00001000172) #11	Slc16a1 (ENSCGRG00001016479) #12	Tafa3 (ENSCGRG00001000102) #13	Ppm1j (ENSCGRG00001010908) #14	Rhoc (ENSCGRG00001021156) #15	Mov10 (ENSCGRG00001010914) #16	Capza1 (ENSCGRG00001002836) #17	St7l (ENSCGRG00001014565) #18	Wnt2b (ENSCGRG00001012445) #19	ENSCGRG00001004537	Cttnbp2nl (ENSCGRG00001022371) #20	ENSCGRG00001001537	Kcnd3 (ENSCGRG00001015791) #22	Ddx20 (ENSCGRG00001014132) #23	Inka2 (ENSCGRG00001010315) #24	Rap1a (ENSCGRG00001016141) #25	Adora3 (ENSCGRG00001021966) #26	Tmigd3 (ENSCGRG00001018286) #27	I830077J02Rik (ENSCGRG00001009120) #28	Atp5pb (ENSCGRG00001013168) #29	Wdr77 (ENSCGRG00001002232) #30	Ovgp1 (ENSCGRG00001006238) #31	Pifo (ENSCGRG00001012700) #32	ENSCGRG00001023048 #33	Chia1 (ENSCGRG00001018747) #34	ENSCGRG00001000291 ##35	Chil6 (ENSCGRG00001019821) #35	Dennd2d (ENSCGRG00001020875) #36
Golden Hamster	MODERN SPECIES	681	Rsbn1 (ENSMAUG00000014143) #8	Phtf1 (ENSMAUG00000007035) #9	Magi3 (ENSMAUG00000007363) #10	Lrig2 (ENSMAUG00000014920) #11	ENSMAUG00000017894	Slc16a1 (ENSMAUG00000014512) #12	Tafa3 (ENSMAUG00000019199) #13	Ppm1j (ENSMAUG00000001898) #14	Rhoc (ENSMAUG00000011420) #15	Mov10 (ENSMAUG00000013906) #16	Capza1 (ENSMAUG00000015757) #17	St7l (ENSMAUG00000016886) #18	Wnt2b (ENSMAUG00000005891) #19	Cttnbp2nl (ENSMAUG00000013248) #20	ENSMAUG00000014776	Kcnd3 (ENSMAUG00000019508) #22	Ddx20 (ENSMAUG00000010659) #23	Inka2 (ENSMAUG00000011511) #24	Rap1a (ENSMAUG00000013379) #25	Adora3 (ENSMAUG00000014394) #26	Tmigd3 (ENSMAUG00000010720) #27	I830077J02Rik (ENSMAUG00000012709) #28	ENSMAUG00000013010	Atp5pb (ENSMAUG00000014472) #29	Wdr77 (ENSMAUG00000011523) #30	Pifo (ENSMAUG00000012494) #32	ENSMAUG00000014307 #33	Chia1 (ENSMAUG00000000308) #34	ENSMAUG00000006898	ENSMAUG00000008993 ##35	Chil6 (ENSMAUG00000019254) #35
Upper Galilee mountains blind mole rat	MODERN SPECIES	868	ENSNGAG00000017059 #7	Rsbn1 (ENSNGAG00000019425) #8	Phtf1 (ENSNGAG00000015016) #9	ENSNGAG00000016204	Magi3 (ENSNGAG00000011689) #10	Lrig2 (ENSNGAG00000010221) #11	Slc16a1 (ENSNGAG00000014061) #12	Tafa3 (ENSNGAG00000018382) #13	Ppm1j (ENSNGAG00000021142) #14	ENSNGAG00000013328 #15	Mov10 (ENSNGAG00000021868) #16	ENSNGAG00000022738 ##17	St7l (ENSNGAG00000024221) #18	Wnt2b (ENSNGAG00000016171) #19	Cttnbp2nl (ENSNGAG00000021422) #20	Kcnd3 (ENSNGAG00000011906) #22	Ddx20 (ENSNGAG00000022953) #23	Inka2 (ENSNGAG00000015197) #24	Rap1a (ENSNGAG00000022775) #25	Adora3 (ENSNGAG00000001830) #26	Tmigd3 (ENSNGAG00000021259) #27	I830077J02Rik (ENSNGAG00000018819) #28	ENSNGAG00000023617 #29	ENSNGAG00000003051 #30	Ovgp1 (ENSNGAG00000023031) #31
Lesser Egyptian jerboa	MODERN SPECIES	69								Lrig2 (ENSJJAG00000015856) #11	ENSJJAG00000023936 #12	Tafa3 (ENSJJAG00000001192) #13	Ppm1j (ENSJJAG00000014989) #14	Rhoc (ENSJJAG00000004154) #15	Mov10 (ENSJJAG00000016562) #16	ENSJJAG00000017577 ##17	St7l (ENSJJAG00000019603) #18	Kcnd3 (ENSJJAG00000023895) #22	Ddx20 (ENSJJAG00000011198) #23	Rap1a (ENSJJAG00000013293) #25	Adora3 (ENSJJAG00000018221) #26	Tmigd3 (ENSJJAG00000011089) #27	I830077J02Rik (ENSJJAG00000018125) #28	ENSJJAG00000021163 #29	Wdr77 (ENSJJAG00000012937) #30	Ovgp1 (ENSJJAG00000019837) #31	Pifo (ENSJJAG00000002457) #32	ENSJJAG00000000819 #35	Dennd2d (ENSJJAG00000014786) #36	Cept1 (ENSJJAG00000022688) #37	Dram2 (ENSJJAG00000013859)	Lrif1 (ENSJJAG00000015203)	Cd53 (ENSJJAG00000023451)
Kangaroo rat	MODERN SPECIES	397	ENSDORG00000026024	ENSDORG00000024961	ENSDORG00000025437	ENSDORG00000026684	Gbp5 (ENSDORG00000013912)	ENSDORG00000014806	ENSDORG00000002853 ##12	Tafa3 (ENSDORG00000000682) #13	Ppm1j (ENSDORG00000000680) #14	Rhoc (ENSDORG00000003382) #15	Mov10 (ENSDORG00000000673) #16	ENSDORG00000000671 ##17	St7l (ENSDORG00000015552) #18	Wnt2b (ENSDORG00000025091) #19	Cttnbp2nl (ENSDORG00000027299) #20	Kcnd3 (ENSDORG00000011661) #22	Ddx20 (ENSDORG00000011660) #23	Inka2 (ENSDORG00000011659) #24	Rap1a (ENSDORG00000011656) #25	Adora3 (ENSDORG00000024247) #26	Tmigd3 (ENSDORG00000000135) #27	I830077J02Rik (ENSDORG00000000130) #28	ENSDORG00000013352 #29	Wdr77 (ENSDORG00000027503) #30	ENSDORG00000013347 #31	Pifo (ENSDORG00000002911) #32	ENSDORG00000003889 #35	Dennd2d (ENSDORG00000009333) #36	Cept1 (ENSDORG00000009332) #37	Dram2 (ENSDORG00000000526)
Rodentia_A	ANCESTRAL SPECIES		ENSGT00940000160958 #7	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000154955.e.b ##12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.g #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a #26	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958 #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00940000154557.c.a #35	ENSGT00950000182931.A #36	ENSGT00950000183117.a.b #37	ENSGT01030000234578.B.b	ENSGT00390000017353
Hystricomorpha	ANCESTRAL SPECIES	23	ENSGT00390000018096	ENSGT00940000160958 #7	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.g #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a #26	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958 #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00950000182931.A #36	ENSGT00950000183117.a.b #37	ENSGT01030000234578.B.b	ENSGT00390000017353	ENSGT00940000159669
Naked mole-rat female	MODERN SPECIES	10	LRIG2 (ENSHGLG00000016354) #11	ENSHGLG00000016346 #12	ENSHGLG00000034195 #12	TAFA3 (ENSHGLG00000018506) #13	PPM1J (ENSHGLG00000009548) #14	RHOC (ENSHGLG00000032070) #15	MOV10 (ENSHGLG00000004970) #16	ENSHGLG00000045694 #17	ST7L (ENSHGLG00000018040) #18	WNT2B (ENSHGLG00000014959) #19	ENSHGLG00000003197	ENSHGLG00000016608 #20	ENSHGLG00000042226	ENSHGLG00000017681	ENSHGLG00000038826	ENSHGLG00000017438 #22	DDX20 (ENSHGLG00000014848) #23	FAM212B (ENSHGLG00000032533) #24	RAP1A (ENSHGLG00000008139) #25	ADORA3 (ENSHGLG00000006832) #26	ENSHGLG00000004637 #27	ENSHGLG00000041308	ENSHGLG00000004364 #29	WDR77 (ENSHGLG00000008077) #30	ENSHGLG00000036915 #31	PIFO (ENSHGLG00000048487) #32	DENND2D (ENSHGLG00000007550) #36	CEPT1 (ENSHGLG00000004650) #37	DRAM2 (ENSHGLG00000007043)	ENSHGLG00000036901	CD53 (ENSHGLG00000007172)
Hystricomorpha_a	ANCESTRAL SPECIES	14	ENSGT00390000018096	ENSGT00940000160958 #7	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.g #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a #26	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958 #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00950000182931.A #36	ENSGT00950000183117.a.b #37	ENSGT01030000234578.B.b	ENSGT00390000017353	ENSGT00940000159669
Guinea pig	MODERN SPECIES	2	AP4B1 (ENSCPOG00000001286)	ENSCPOG00000037879 #7	RSBN1 (ENSCPOG00000006990) #8	PHTF1 (ENSCPOG00000006981) #9	MAGI3 (ENSCPOG00000006971) #10	LRIG2 (ENSCPOG00000006833) #11	SLC16A1 (ENSCPOG00000022989) #12	TAFA3 (ENSCPOG00000036826) #13	PPM1J (ENSCPOG00000004145) #14	RHOC (ENSCPOG00000014541) #15	MOV10 (ENSCPOG00000014537) #16	CAPZA1 (ENSCPOG00000014532) #17	ST7L (ENSCPOG00000014528) #18	WNT2B (ENSCPOG00000000194) #19	CTTNBP2NL (ENSCPOG00000040118) #20	KCND3 (ENSCPOG00000001820) #22	DDX20 (ENSCPOG00000032340) #23	INKA2 (ENSCPOG00000001816) #24	RAP1A (ENSCPOG00000032437) #25	ADORA3 (ENSCPOG00000032151) #26	C1orf162 (ENSCPOG00000025561) #28	ATP5PB (ENSCPOG00000014070) #29	WDR77 (ENSCPOG00000025009) #30	OVGP1 (ENSCPOG00000000902) #31	PIFO (ENSCPOG00000033762) #32	DENND2D (ENSCPOG00000003677) #36	CEPT1 (ENSCPOG00000011067) #37	DRAM2 (ENSCPOG00000003496)	ENSCPOG00000039442	CD53 (ENSCPOG00000010280)	ENSCPOG00000023753
Hystricomorpha_b	ANCESTRAL SPECIES	6	ENSGT00390000018096	ENSGT00940000160958 #7	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.g #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a #26	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958 #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00950000182931.A #36	ENSGT00950000183117.a.b #37	ENSGT01030000234578.B.b	ENSGT00390000017353	ENSGT00940000159669
Long-tailed chinchilla	MODERN SPECIES	142	BCL2L15 (ENSCLAG00000013554)	ENSCLAG00000009628 #7	RSBN1 (ENSCLAG00000008858) #8	PHTF1 (ENSCLAG00000010050) #9	MAGI3 (ENSCLAG00000005341) #10	LRIG2 (ENSCLAG00000004883) #11	SLC16A1 (ENSCLAG00000006864) #12	TAFA3 (ENSCLAG00000005391) #13	PPM1J (ENSCLAG00000005118) #14	RHOC (ENSCLAG00000004444) #15	MOV10 (ENSCLAG00000008493) #16	CAPZA1 (ENSCLAG00000007602) #17	ST7L (ENSCLAG00000007732) #18	WNT2B (ENSCLAG00000005379) #19	CTTNBP2NL (ENSCLAG00000006818) #20	KCND3 (ENSCLAG00000005748) #22	DDX20 (ENSCLAG00000008874) #23	INKA2 (ENSCLAG00000007395) #24	RAP1A (ENSCLAG00000006589) #25	ADORA3 (ENSCLAG00000006054) #26	ENSCLAG00000009052 #27	C1orf162 (ENSCLAG00000009693) #28	ATP5PB (ENSCLAG00000006182) #29	WDR77 (ENSCLAG00000005791) #30	OVGP1 (ENSCLAG00000005245) #31	PIFO (ENSCLAG00000007375) #32	DENND2D (ENSCLAG00000005887) #36	CEPT1 (ENSCLAG00000006226) #37	DRAM2 (ENSCLAG00000007313)	LRIF1 (ENSCLAG00000006529)	CD53 (ENSCLAG00000008592)
Degu	MODERN SPECIES	181	ENSODEG00000008326 #37	PHTF1 (ENSODEG00000007432) #9	MAGI3 (ENSODEG00000007160) #10	ENSODEG00000019722	ENSODEG00000009254	LRIG2 (ENSODEG00000012585) #11	SLC16A1 (ENSODEG00000007835) #12	TAFA3 (ENSODEG00000009074) #13	PPM1J (ENSODEG00000007627) #14	ENSODEG00000008244 #15	MOV10 (ENSODEG00000010401) #16	ENSODEG00000007252 #17	ST7L (ENSODEG00000007468) #18	WNT2B (ENSODEG00000008783) #19	CTTNBP2NL (ENSODEG00000008068) #20	KCND3 (ENSODEG00000008613) #22	ENSODEG00000007653 #23	INKA2 (ENSODEG00000009526) #24	ENSODEG00000008652 #25	ENSODEG00000007477	ADORA3 (ENSODEG00000007861) #26	ENSODEG00000008789 #27	ENSODEG00000009577 #29	WDR77 (ENSODEG00000008128) #30	OVGP1 (ENSODEG00000010601) #31	PIFO (ENSODEG00000007650) #32	ENSODEG00000019481	DENND2D (ENSODEG00000008171) #36	ENSODEG00000008262 #37	DRAM2 (ENSODEG00000009902)
Sciuridae	ANCESTRAL SPECIES		ENSGT00940000160958 #7	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000154955.e.b ##12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.f.a ##17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.n #25	ENSGT01030000234555.a.a.b.a.b.a #26	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958 #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00940000154557.c.a #35	ENSGT00950000182931.A #36	ENSGT00950000183117.a.b #37	ENSGT01030000234578.B.b	ENSGT00390000017353
Marmotini	ANCESTRAL SPECIES	62	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000155644.d #13	ENSGT00940000154955.e.b ##12	ENSGT00940000155644.c.b #13	ENSGT00940000155644.c.a #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a.q #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.g #17	ENSGT00950000183119.a.e.a.d.f.a ##17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.n #25	ENSGT01030000234555.a.a.b.a.b.a #26	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958.ib.a #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017.e #32
Marmotini_b	ANCESTRAL SPECIES	74	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000155644.d #13	ENSGT00940000154955.e.b ##12	ENSGT00940000155644.c.a #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a.q #15	ENSGT00940000156024.g #16	ENSGT00950000183119.a.e.a.d.g #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.n #25	ENSGT01030000234555.a.a.b.a.b.a #26	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958.ib.a #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017.e #32
Squirrel	MODERN SPECIES	290	BCL2L15 (ENSSTOG00000014693)	PTPN22 (ENSSTOG00000014683) #7	RSBN1 (ENSSTOG00000005592) #8	PHTF1 (ENSSTOG00000005566) #9	MAGI3 (ENSSTOG00000005528) #10	LRIG2 (ENSSTOG00000000595) #11	SLC16A1 (ENSSTOG00000006137) #12	TAFA3 (ENSSTOG00000032343) #13	PPM1J (ENSSTOG00000015975) #14	ENSSTOG00000022123 #15	ENSSTOG00000015963 #16	ENSSTOG00000015956 ##17	WNT2B (ENSSTOG00000011442) #19	ST7L (ENSSTOG00000020270) #18	CTTNBP2NL (ENSSTOG00000011437) #20	KCND3 (ENSSTOG00000001773) #22	DDX20 (ENSSTOG00000029089) #23	INKA2 (ENSSTOG00000001760) #24	RAP1A (ENSSTOG00000027847) #25	ADORA3 (ENSSTOG00000025181) #26	ENSSTOG00000000483 #27	ENSSTOG00000028567 #28	ENSSTOG00000007630 #29	WDR77 (ENSSTOG00000025877) #30	OVGP1 (ENSSTOG00000023994) #31	PIFO (ENSSTOG00000031578) #32
Arctic ground squirrel	MODERN SPECIES	134	AP4B1 (ENSUPAG00010022296)	RSBN1 (ENSUPAG00010022293) #8	PHTF1 (ENSUPAG00010022262) #9	MAGI3 (ENSUPAG00010022248) #10	ENSUPAG00010022242	LRIG2 (ENSUPAG00010022233) #11	SLC16A1 (ENSUPAG00010022230) #12	ENSUPAG00010022155 ##12	TAFA3 (ENSUPAG00010022150) #13	PPM1J (ENSUPAG00010022145) #14	MOV10 (ENSUPAG00010022136) #16	CAPZA1 (ENSUPAG00010022133) #17	WNT2B (ENSUPAG00010022130) #19	ST7L (ENSUPAG00010022108) #18	CTTNBP2NL (ENSUPAG00010022096) #20	KCND3 (ENSUPAG00010022085) #22	DDX20 (ENSUPAG00010022080) #23	INKA2 (ENSUPAG00010022078) #24	RAP1A (ENSUPAG00010022075) #25	ADORA3 (ENSUPAG00010022072) #26	ENSUPAG00010022070 #27	C1orf162 (ENSUPAG00010022067) #28	ATP5PB (ENSUPAG00010022065) #29	WDR77 (ENSUPAG00010022061) #30	ENSUPAG00010022012 #31	ENSUPAG00010022009
Alpin marmot	MODERN SPECIES	79	PTPN22 (ENSMMMG00000013024) #7	RSBN1 (ENSMMMG00000013010) #8	PHTF1 (ENSMMMG00000012813) #9	MAGI3 (ENSMMMG00000012706) #10	LRIG2 (ENSMMMG00000012626) #11	SLC16A1 (ENSMMMG00000012618) #12	ENSMMMG00000012321 ##12	ENSMMMG00000012316 #13	ENSMMMG00000012304 #14	ENSMMMG00000012297 #15	MOV10 (ENSMMMG00000012241) #16	CAPZA1 (ENSMMMG00000012224) ##17	ST7L (ENSMMMG00000012123) #18	WNT2B (ENSMMMG00000012112) #19	CTTNBP2NL (ENSMMMG00000012103) #20	KCND3 (ENSMMMG00000012044) #22	DDX20 (ENSMMMG00000012030) #23	INKA2 (ENSMMMG00000012022) #24	RAP1A (ENSMMMG00000012006) #25	ADORA3 (ENSMMMG00000011975) #26	ENSMMMG00000011967 #27	C1orf162 (ENSMMMG00000011956) #28	ENSMMMG00000011946 #29	WDR77 (ENSMMMG00000011929) #30	ENSMMMG00000011629 #31	ENSMMMG00000011617 #32	ENSMMMG00000011608 #32	ENSMMMG00000011580 #35
Eurasian red squirrel	MODERN SPECIES		RSBN1 (ENSSVLG00005020283) #8	PHTF1 (ENSSVLG00005020069) #9	MAGI3 (ENSSVLG00005019925) #10	ENSSVLG00005019855	LRIG2 (ENSSVLG00005019679) #11	SLC16A1 (ENSSVLG00005019541) #12	ENSSVLG00005019446 ##12	TAFA3 (ENSSVLG00005019351) #13	PPM1J (ENSSVLG00005019163) #14	RHOC (ENSSVLG00005019061) #15	MOV10 (ENSSVLG00005019002) #16	ENSSVLG00005018884 ##17	ST7L (ENSSVLG00005018716) #18	WNT2B (ENSSVLG00005018609) #19	CTTNBP2NL (ENSSVLG00005018565) #20	KCND3 (ENSSVLG00005018411) #22	DDX20 (ENSSVLG00005018335) #23	INKA2 (ENSSVLG00005018314) #24	ENSSVLG00005018277 #25	TMIGD3 (ENSSVLG00005018210) #27	C1orf162 (ENSSVLG00005018121) #28	ENSSVLG00005017977 #29	WDR77 (ENSSVLG00005017918) #30	OVGP1 (ENSSVLG00005017787) #31	PIFO (ENSSVLG00005017626) #32	ENSSVLG00005017351 #35	DENND2D (ENSSVLG00005017048) #36	CEPT1 (ENSSVLG00005016962) #37	DRAM2 (ENSSVLG00005016915)	ENSSVLG00005016873	LRIF1 (ENSSVLG00005016841)
Lagomorpha	ANCESTRAL SPECIES	1	ENSGT00390000018096	ENSGT00940000160958 #7	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT00930000151073 #27	ENSGT01030000234555.a.a.b.a.b.a #26	ENSGT00390000015005 #28	ENSGT00390000001958 #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00940000163351	ENSGT00950000182931.A #36	ENSGT00950000183117.a.b #37	ENSGT01030000234578.B.b	ENSGT00390000017353
Rabbit	MODERN SPECIES	4	PHTF1 (ENSOCUG00000003752) #9	MAGI3 (ENSOCUG00000017382) #10	ENSOCUG00000024668	LRIG2 (ENSOCUG00000010256) #11	ENSOCUG00000035073	SLC16A1 (ENSOCUG00000016776) #12	TAFA3 (ENSOCUG00000000280) #13	PPM1J (ENSOCUG00000006310) #14	ENSOCUG00000027213 #15	MOV10 (ENSOCUG00000000276) #16	CAPZA1 (ENSOCUG00000000270) #17	ENSOCUG00000000269 #18	WNT2B (ENSOCUG00000000266) #19	CTTNBP2NL (ENSOCUG00000023315) #20	ENSOCUG00000023372	KCND3 (ENSOCUG00000014279) #22	DDX20 (ENSOCUG00000025939) #23	INKA2 (ENSOCUG00000017680) #24	RAP1A (ENSOCUG00000030320) #25	ENSOCUG00000024498	ENSOCUG00000007822 #27	ADORA3 (ENSOCUG00000023239) #26	C1orf162 (ENSOCUG00000007816) #28	ENSOCUG00000007809 #29	WDR77 (ENSOCUG00000007801) #30	OVGP1 (ENSOCUG00000015946) #31	PIFO (ENSOCUG00000028213) #32	CHI3L2 (ENSOCUG00000015772)	DENND2D (ENSOCUG00000015755) #36	CEPT1 (ENSOCUG00000015742) #37	DRAM2 (ENSOCUG00000015731)
Pika	MODERN SPECIES	459																ENSOPRG00000004068 #22	DDX20 (ENSOPRG00000004035) #23	INKA2 (ENSOPRG00000004027) #24	RAP1A (ENSOPRG00000003999) #25
Primates	ANCESTRAL SPECIES	4	ENSGT00940000160958 #7	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000154955.e.b ##12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a #26	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958 #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00940000163644	ENSGT00390000001017 #32	ENSGT00940000154557.c.a #35	ENSGT00940000163351	ENSGT00950000182931.A #36	ENSGT00950000183117.a.b #37
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00940000160958 #7	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000154955.e.b ##12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a #26	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958.p #29	ENSGT00390000010711 #30	ENSGT00940000163644	ENSGT00390000001017 #32	ENSGT00940000154557.c.a #35	ENSGT00940000163351	ENSGT00950000182931.A #36	ENSGT00950000183117.a.b #37	ENSGT01030000234578.B.b
Lemuriformes	ANCESTRAL SPECIES		ENSGT00940000160958 #7	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000154955.e.b ##12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958.p #29	ENSGT00390000010711 #30	ENSGT00940000163644	ENSGT00390000001017 #32	ENSGT00940000154557.c.a #35	ENSGT00940000163351	ENSGT00950000182931.A #36	ENSGT00950000183117.a.b #37	ENSGT01030000234578.B.b	ENSGT00390000017353
Lemuriformes_a	ANCESTRAL SPECIES	31	ENSGT00940000160958 #7	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000154955.e.b ##12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958.p #29	ENSGT00390000010711 #30	ENSGT00940000163644	ENSGT00390000001017 #32	ENSGT00940000154557.c.a #35	ENSGT00940000163351	ENSGT00950000182931.A #36	ENSGT00950000183117.a.b #37	ENSGT01030000234578.B.b	ENSGT00390000017353
Greater bamboo lemur	MODERN SPECIES	507								TAFA3 (ENSPSMG00000009787) #13	PPM1J (ENSPSMG00000009821) #14	RHOC (ENSPSMG00000009860) #15	MOV10 (ENSPSMG00000009983) #16	CAPZA1 (ENSPSMG00000010026) #17	ST7L (ENSPSMG00000010180) #18	WNT2B (ENSPSMG00000010388) #19	CTTNBP2NL (ENSPSMG00000010396) #20	KCND3 (ENSPSMG00000010421) #22	ENSPSMG00000010429	DDX20 (ENSPSMG00000010456) #23	ENSPSMG00000010468	RAP1A (ENSPSMG00000010516) #25	TMIGD3 (ENSPSMG00000010613) #27	C1orf162 (ENSPSMG00000010617) #28	ATP5PB (ENSPSMG00000010639) #29	WDR77 (ENSPSMG00000010667) #30	ENSPSMG00000010689	PIFO (ENSPSMG00000010697) #32	CHI3L2 (ENSPSMG00000010734)	ENSPSMG00000010739	DENND2D (ENSPSMG00000010765) #36	CEPT1 (ENSPSMG00000010781) #37	DRAM2 (ENSPSMG00000010794)
Mouse lemur	MODERN SPECIES	11	RSBN1 (ENSMICG00000001369) #8	PHTF1 (ENSMICG00000001360) #9	MAGI3 (ENSMICG00000042078) #10	LRIG2 (ENSMICG00000001333) #11	ENSMICG00000030251	ENSMICG00000012818 #12	TAFA3 (ENSMICG00000003208) #13	PPM1J (ENSMICG00000035392) #14	RHOC (ENSMICG00000003200) #15	MOV10 (ENSMICG00000003187) #16	CAPZA1 (ENSMICG00000003182) #17	ST7L (ENSMICG00000003173) #18	WNT2B (ENSMICG00000003171) #19	ENSMICG00000017384	CTTNBP2NL (ENSMICG00000009868) #20	KCND3 (ENSMICG00000046146) #22	DDX20 (ENSMICG00000011509) #23	INKA2 (ENSMICG00000033017) #24	ENSMICG00000011501 #25	ADORA3 (ENSMICG00000031902) #26	ENSMICG00000000880	CRYZ (ENSMICG00000015873)	TYW3 (ENSMICG00000015883)	LHX8 (ENSMICG00000012199)	SLC44A5 (ENSMICG00000012206)	ACADM (ENSMICG00000017809)	ENSMICG00000017810	MSH4 (ENSMICG00000017811)	ASB17 (ENSMICG00000042539)	ENSMICG00000026387	ENSMICG00000042274
Bushbaby	MODERN SPECIES	188	BCL2L15 (ENSOGAG00000013916)	PTPN22 (ENSOGAG00000013912) #7	RSBN1 (ENSOGAG00000013910) #8	PHTF1 (ENSOGAG00000000695) #9	MAGI3 (ENSOGAG00000000693) #10	LRIG2 (ENSOGAG00000003959) #11	SLC16A1 (ENSOGAG00000004969) #12	TAFA3 (ENSOGAG00000014095) #13	PPM1J (ENSOGAG00000014088) #14	RHOC (ENSOGAG00000027678) #15	MOV10 (ENSOGAG00000014080) #16	CAPZA1 (ENSOGAG00000014074) #17	ST7L (ENSOGAG00000014069) #18	WNT2B (ENSOGAG00000014065) #19	CTTNBP2NL (ENSOGAG00000033049) #20	KCND3 (ENSOGAG00000010504) #22	DDX20 (ENSOGAG00000010503) #23	INKA2 (ENSOGAG00000010502) #24	RAP1A (ENSOGAG00000030644) #25	ENSOGAG00000027410	ENSOGAG00000030415 #26	TMIGD3 (ENSOGAG00000033613) #27	C1orf162 (ENSOGAG00000008150) #28	ENSOGAG00000011486 #29	WDR77 (ENSOGAG00000030741) #30
Haplorrhini	ANCESTRAL SPECIES	1	ENSGT00940000160958 #7	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000154720.b	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a #26	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958 #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00940000163644	ENSGT00390000001017 #32	ENSGT00940000154557.c.a #35	ENSGT00940000154557.c.b ##35	ENSGT00940000163351	ENSGT00950000182931.A #36
Simiiformes	ANCESTRAL SPECIES	3	ENSGT00940000160958 #7	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.b #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000154720.b.pb	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT01030000234555.a.a.b.a.b.a #26	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958.t.a #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00940000163644	ENSGT00390000001017 #32	ENSGT00940000154557.c.a #35	ENSGT00940000154557.c.b ##35	ENSGT00940000163351	ENSGT00950000182931.A #36
Catarrhini	ANCESTRAL SPECIES	3	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.b #17	ENSGT00390000000873.a.a #18	ENSGT00910000145979	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000154720.b.pb	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT01030000234555.a.a.b.a.b.a #26	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958.t.a #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00940000163644	ENSGT00390000001017 #32	ENSGT00940000154557.c.a #35	ENSGT00940000154557.c.b ##35	ENSGT00940000163351	ENSGT00950000182931.A #36
Hominoidea	ANCESTRAL SPECIES	3	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00390000000475.sb.u	ENSGT00390000013102.e.a.m.b	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.b #17	ENSGT00390000000873.a.a #18	ENSGT00910000145979	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT01030000234555.a.a.b.a.b.a #26	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958.t.a #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00940000154557.c.a #35	ENSGT00940000154557.c.b ##35	ENSGT00940000163351	ENSGT00950000182931.A #36	ENSGT00950000183117.a.b #37
Hominidae	ANCESTRAL SPECIES	3	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00390000000475.sb.u.e	ENSGT00390000013102.e.a.m.b	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.b #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT01030000234555.a.a.b.a.b.a #26	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958.t.a #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00940000154557.c.a #35	ENSGT00940000154557.c.b ##35	ENSGT00940000163351	ENSGT00950000182931.A #36	ENSGT00950000183117.a.b #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	3	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00390000000475.sb.u.e	ENSGT00390000013102.e.a.m.b	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.b #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT01030000234555.a.a.b.a.b.a #26	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958.t.a #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00940000154557.c.a #35	ENSGT00940000154557.c.b ##35	ENSGT00940000163351	ENSGT00950000182931.A #36	ENSGT00950000183117.a.b #37
Gorilla	MODERN SPECIES		ENSGGOG00000026153	ENSGGOG00000023056	LRIG2 (ENSGGOG00000022639) #11	ENSGGOG00000037334	SLC16A1 (ENSGGOG00000015526) #12	ENSGGOG00000037218	TAFA3 (ENSGGOG00000002749) #13	PPM1J (ENSGGOG00000002743) #14	RHOC (ENSGGOG00000002741) #15	MOV10 (ENSGGOG00000002731) #16	ENSGGOG00000038612	ENSGGOG00000022483	ST7L (ENSGGOG00000034881) #18	WNT2B (ENSGGOG00000003613) #19	CTTNBP2NL (ENSGGOG00000002231) #20	KCND3 (ENSGGOG00000015582) #22	DDX20 (ENSGGOG00000015576) #23	INKA2 (ENSGGOG00000027861) #24	ENSGGOG00000003037	TMIGD3 (ENSGGOG00000005924) #27	C1orf162 (ENSGGOG00000005921) #28	ATP5PB (ENSGGOG00000005215) #29	WDR77 (ENSGGOG00000005208) #30	OVGP1 (ENSGGOG00000005204) #31	PIFO (ENSGGOG00000008535) #32	CHIA (ENSGGOG00000008523) #35	ENSGGOG00000039604 ##35	ENSGGOG00000039363	ENSGGOG00000016018	DENND2D (ENSGGOG00000001542) #36	CEPT1 (ENSGGOG00000009575) #37
Homo/Pan group	ANCESTRAL SPECIES	4	ENSGT00390000018096	ENSGT00940000160958 #7	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.b #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT01030000234555.a.a.b.a.b.a #26	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958.t.a #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00940000154557.c.a #35	ENSGT00940000154557.c.b ##35	ENSGT00940000163351	ENSGT00950000182931.A #36	ENSGT00950000183117.a.b #37
Human	MODERN SPECIES		PTPN22 (ENSG00000134242) #7	RSBN1 (ENSG00000081019) #8	PHTF1 (ENSG00000116793) #9	MAGI3 (ENSG00000081026) #10	LRIG2 (ENSG00000198799) #11	SLC16A1 (ENSG00000155380) #12	TAFA3 (ENSG00000184599) #13	PPM1J (ENSG00000155367) #14	ENSG00000271810	RHOC (ENSG00000155366) #15	MOV10 (ENSG00000155363) #16	CAPZA1 (ENSG00000116489) #17	ST7L (ENSG00000007341) #18	WNT2B (ENSG00000134245) #19	CTTNBP2NL (ENSG00000143079) #20	KCND3 (ENSG00000171385) #22	DDX20 (ENSG00000064703) #23	INKA2 (ENSG00000197852) #24	RAP1A (ENSG00000116473) #25	ADORA3 (ENSG00000282608) #26	TMIGD3 (ENSG00000121933) #27	C1orf162 (ENSG00000143110) #28	ATP5PB (ENSG00000116459) #29	WDR77 (ENSG00000116455) #30	OVGP1 (ENSG00000085465) #31	PIFO (ENSG00000173947) #32	CHIA (ENSG00000134216) #35	CHI3L2 (ENSG00000064886)	DENND2D (ENSG00000162777) #36	CEPT1 (ENSG00000134255) #37	DRAM2 (ENSG00000156171)
Pan	ANCESTRAL SPECIES		ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000163704.h	ENSGT00910000148129	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.b #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958.t.a #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00940000154557.c.a #35	ENSGT00940000154557.c.b ##35	ENSGT00940000163351	ENSGT00950000182931.A #36	ENSGT00950000183117.a.b #37	ENSGT01030000234578.B.b
Chimpanzee	MODERN SPECIES		ENSPTRG00000052291	ENSPTRG00000049946	ENSPTRG00000051751	LRIG2 (ENSPTRG00000001120) #11	SLC16A1 (ENSPTRG00000001116) #12	ENSPTRG00000043085	ENSPTRG00000051943	TAFA3 (ENSPTRG00000001114) #13	PPM1J (ENSPTRG00000001113) #14	RHOC (ENSPTRG00000001112) #15	MOV10 (ENSPTRG00000001111) #16	CAPZA1 (ENSPTRG00000001110) #17	ST7L (ENSPTRG00000001109) #18	WNT2B (ENSPTRG00000001108) #19	CTTNBP2NL (ENSPTRG00000001107) #20	KCND3 (ENSPTRG00000001106) #22	DDX20 (ENSPTRG00000001105) #23	INKA2 (ENSPTRG00000001104) #24	RAP1A (ENSPTRG00000001102) #25	TMIGD3 (ENSPTRG00000001101) #27	C1H1orf162 (ENSPTRG00000001100) #28	ATP5PB (ENSPTRG00000001099) #29	WDR77 (ENSPTRG00000001098) #30	OVGP1 (ENSPTRG00000001097) #31	PIFO (ENSPTRG00000001095) #32	CHIA (ENSPTRG00000049663) #35	ENSPTRG00000045154 ##35	CHI3L2 (ENSPTRG00000001092)	DENND2D (ENSPTRG00000001090) #36	CEPT1 (ENSPTRG00000001089) #37	DRAM2 (ENSPTRG00000001087)
Bonobo	MODERN SPECIES		PTPN22 (ENSPPAG00000036012) #7	RSBN1 (ENSPPAG00000028704) #8	PHTF1 (ENSPPAG00000028420) #9	ENSPPAG00000038598 #10	SLC16A1 (ENSPPAG00000031036) #12	ENSPPAG00000028885	ENSPPAG00000002404	TAFA3 (ENSPPAG00000026811) #13	PPM1J (ENSPPAG00000023616) #14	RHOC (ENSPPAG00000032447) #15	MOV10 (ENSPPAG00000031079) #16	CAPZA1 (ENSPPAG00000033937) #17	ST7L (ENSPPAG00000037378) #18	WNT2B (ENSPPAG00000026756) #19	CTTNBP2NL (ENSPPAG00000028003) #20	KCND3 (ENSPPAG00000039961) #22	DDX20 (ENSPPAG00000031680) #23	INKA2 (ENSPPAG00000021509) #24	RAP1A (ENSPPAG00000040050) #25	TMIGD3 (ENSPPAG00000035113) #27	C1orf162 (ENSPPAG00000037238) #28	ENSPPAG00000040192 #29	WDR77 (ENSPPAG00000038773) #30	OVGP1 (ENSPPAG00000025014) #31	PIFO (ENSPPAG00000005642) #32	CHIA (ENSPPAG00000022214) #35	ENSPPAG00000034524 ##35	CHI3L2 (ENSPPAG00000038288)	DENND2D (ENSPPAG00000037282) #36	CEPT1 (ENSPPAG00000043162) #37	DRAM2 (ENSPPAG00000033552)
Orangutan	MODERN SPECIES		MAGI3 (ENSPPYG00000001011) #10	ENSPPYG00000032770	ENSPPYG00000034824	LRIG2 (ENSPPYG00000001013) #11	SLC16A1 (ENSPPYG00000001014) #12	ENSPPYG00000041354	ENSPPYG00000001016	ENSPPYG00000035274	ENSPPYG00000001017 #13	RHOC (ENSPPYG00000001018) #14	MOV10 (ENSPPYG00000001020) #16	CAPZA1 (ENSPPYG00000001021) #17	ST7L (ENSPPYG00000001022) #18	WNT2B (ENSPPYG00000001023) #19	CTTNBP2NL (ENSPPYG00000001024) #20	KCND3 (ENSPPYG00000001025) #22	DDX20 (ENSPPYG00000001026) #23	INKA2 (ENSPPYG00000001027) #24	RAP1A (ENSPPYG00000001028) #25	TMIGD3 (ENSPPYG00000001030) #27	ATP5PB (ENSPPYG00000001032) #29	C1orf162 (ENSPPYG00000001031) #28	WDR77 (ENSPPYG00000001033) #30	OVGP1 (ENSPPYG00000001034) #31	ENSPPYG00000037725	ENSPPYG00000001035 #32	CHIA (ENSPPYG00000001036) #35	ENSPPYG00000001037 ##35	CHI3L2 (ENSPPYG00000001038)	DENND2D (ENSPPYG00000001039) #36	CEPT1 (ENSPPYG00000001040) #37
Gibbon	MODERN SPECIES	2	RSBN1 (ENSNLEG00000004426) #8	PHTF1 (ENSNLEG00000004383) #9	MAGI3 (ENSNLEG00000004350) #10	LRIG2 (ENSNLEG00000004313) #11	SLC16A1 (ENSNLEG00000004297) #12	ENSNLEG00000004286	PPM1J (ENSNLEG00000004240) #14	RHOC (ENSNLEG00000004234) #15	MOV10 (ENSNLEG00000004226) #16	CAPZA1 (ENSNLEG00000028431) #17	ST7L (ENSNLEG00000004126) #18	ENSNLEG00000004065	WNT2B (ENSNLEG00000004104) #19	CTTNBP2NL (ENSNLEG00000004112) #20	ENSNLEG00000033662	KCND3 (ENSNLEG00000004095) #22	DDX20 (ENSNLEG00000004040) #23	INKA2 (ENSNLEG00000004037) #24	RAP1A (ENSNLEG00000004018) #25	TMIGD3 (ENSNLEG00000028673) #27	C1orf162 (ENSNLEG00000027786) #28	ATP5PB (ENSNLEG00000003971) #29	WDR77 (ENSNLEG00000003918) #30	OVGP1 (ENSNLEG00000003907) #31	ENSNLEG00000033638	PIFO (ENSNLEG00000003881) #32	CHIA (ENSNLEG00000003831) #35	ENSNLEG00000030395 ##35	CHI3L2 (ENSNLEG00000003769)	DENND2D (ENSNLEG00000003758) #36	CEPT1 (ENSNLEG00000003741) #37
Cercopithecidae	ANCESTRAL SPECIES	2	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00510000047030.xb.a.d	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.b #17	ENSGT00390000000873.a.a #18	ENSGT00910000145979	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000154720.b.pb	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958.t.a #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00940000163644	ENSGT00390000001017 #32	ENSGT00940000154557.c.a #35	ENSGT00940000154557.c.b ##35	ENSGT00940000163351	ENSGT00950000182931.A #36	ENSGT00950000183117.a.b #37
Cercopithecinae	ANCESTRAL SPECIES		ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00510000047030.xb.a.d	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.b #17	ENSGT00390000000873.a.a #18	ENSGT00910000145979	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT00930000151073 #27	ENSGT00950000182857.a.a.b.a.r.a.b.b.b.a	ENSGT00390000015005 #28	ENSGT00390000001958.t.a #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00940000154557.c.a #35	ENSGT00940000154557.c.b ##35	ENSGT00940000163351	ENSGT00950000182931.A #36	ENSGT00950000183117.a.b #37
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00510000047030.xb.a.d	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.b #17	ENSGT00390000000873.a.a #18	ENSGT00910000145979	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT00930000151073 #27	ENSGT00950000182857.a.a.b.a.r.a.b.b.b.a	ENSGT00390000015005 #28	ENSGT00390000001958.t.a #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00940000154557.c.a #35	ENSGT00940000154557.c.b ##35	ENSGT00940000163351	ENSGT00950000182931.A #36	ENSGT00950000183117.a.b #37
Macaca	ANCESTRAL SPECIES		ENSGT00940000160958 #7	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.b #17	ENSGT00390000000873.a.a #18	ENSGT00910000145979	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT00930000151073 #27	ENSGT00950000182857.a.a.b.a.r.a.b.b.b.a	ENSGT00390000015005 #28	ENSGT00390000001958.t.a.g #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00940000154557.c.a #35	ENSGT00940000154557.c.b ##35	ENSGT00940000163351	ENSGT00950000182931.A #36	ENSGT00950000183117.a.b #37
Pig-tailed macaque	MODERN SPECIES	556	MAGI3 (ENSMNEG00000033832) #10	ENSMNEG00000035375	ENSMNEG00000029222	LRIG2 (ENSMNEG00000043055) #11	SLC16A1 (ENSMNEG00000041688) #12	ENSMNEG00000036594	TAFA3 (ENSMNEG00000026429) #13	PPM1J (ENSMNEG00000034093) #14	RHOC (ENSMNEG00000036794) #15	MOV10 (ENSMNEG00000040033) #16	CAPZA1 (ENSMNEG00000032031) #17	ST7L (ENSMNEG00000041208) #18	ENSMNEG00000032002	WNT2B (ENSMNEG00000037237) #19	CTTNBP2NL (ENSMNEG00000036126) #20	KCND3 (ENSMNEG00000035414) #22	DDX20 (ENSMNEG00000005757) #23	INKA2 (ENSMNEG00000040750) #24	RAP1A (ENSMNEG00000031184) #25	TMIGD3 (ENSMNEG00000038209) #27	ENSMNEG00000005161	C1orf162 (ENSMNEG00000034601) #28	ENSMNEG00000041454 #29	WDR77 (ENSMNEG00000030129) #30	OVGP1 (ENSMNEG00000036501) #31	PIFO (ENSMNEG00000027237) #32	CHIA (ENSMNEG00000032841) #35	ENSMNEG00000029808 ##35	CHI3L2 (ENSMNEG00000037931)	DENND2D (ENSMNEG00000039934) #36	CEPT1 (ENSMNEG00000039798) #37
Macaca_a	ANCESTRAL SPECIES		ENSGT00940000158791 #11	ENSGT01100000263676.b.b.a.c.a	ENSGT00940000154955.f #12	ENSGT01100000263539.b.a.b.b.b.b.b	ENSGT00510000047030.xb.a.d	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.b #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00390000018566.i.d	ENSGT00950000182852.B #20	ENSGT01100000263493.a.a.a.b.a.a.b.a.b.b.a	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT00930000151073 #27	ENSGT00950000182857.a.a.b.a.r.a.b.b.b.a	ENSGT00390000015005 #28	ENSGT00390000001958.t.a.g #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00940000154557.c.a #35	ENSGT00940000154557.c.b ##35	ENSGT00940000163351	ENSGT00950000182931.A #36	ENSGT00950000183117.a.b #37
Rhesus	MODERN SPECIES		PHTF1 (ENSMMUG00000017819) #9	MAGI3 (ENSMMUG00000017817) #10	LRIG2 (ENSMMUG00000019098) #11	ENSMMUG00000064630	SLC16A1 (ENSMMUG00000006171) #12	ENSMMUG00000057278	TAFA3 (ENSMMUG00000058665) #13	PPM1J (ENSMMUG00000007767) #14	MOV10 (ENSMMUG00000059489) #16	CAPZA1 (ENSMMUG00000015668) #17	ST7L (ENSMMUG00000007766) #18	WNT2B (ENSMMUG00000007765) #19	ENSMMUG00000037458	CTTNBP2NL (ENSMMUG00000018455) #20	ENSMMUG00000057625	KCND3 (ENSMMUG00000050825) #22	DDX20 (ENSMMUG00000014489) #23	INKA2 (ENSMMUG00000052184) #24	RAP1A (ENSMMUG00000014486) #25	TMIGD3 (ENSMMUG00000003581) #27	C1H1orf162 (ENSMMUG00000003579) #28	ATP5PB (ENSMMUG00000065322) #29	OVGP1 (ENSMMUG00000003309) #31	PIFO (ENSMMUG00000053581) #32	CHIA (ENSMMUG00000008857) #35	ENSMMUG00000002454 ##35	CHI3L2 (ENSMMUG00000002455)	DENND2D (ENSMMUG00000049470) #36	CEPT1 (ENSMMUG00000002461) #37	LRIF1 (ENSMMUG00000000812)	CD53 (ENSMMUG00000000811)
Crab-eating macaque	MODERN SPECIES		ENSMFAG00000062348	ENSMFAG00000047894	SLC16A1 (ENSMFAG00000035894) #12	ENSMFAG00000050047	ENSMFAG00000053511	ENSMFAG00000027212	ENSMFAG00000064876 #13	MOV10 (ENSMFAG00000002283) #16	ENSMFAG00000001491 #15	CAPZA1 (ENSMFAG00000035179) #17	ST7L (ENSMFAG00000037326) #18	WNT2B (ENSMFAG00000002295) #19	ENSMFAG00000007433	CTTNBP2NL (ENSMFAG00000054875) #20	ENSMFAG00000061193	KCND3 (ENSMFAG00000002047) #22	DDX20 (ENSMFAG00000031755) #23	INKA2 (ENSMFAG00000038293) #24	RAP1A (ENSMFAG00000034202) #25	TMIGD3 (ENSMFAG00000002528) #27	ENSMFAG00000011493	C1orf162 (ENSMFAG00000034319) #28	ATP5PB (ENSMFAG00000037534) #29	WDR77 (ENSMFAG00000030055) #30	OVGP1 (ENSMFAG00000034315) #31	PIFO (ENSMFAG00000038084) #32	CHIA (ENSMFAG00000003339) #35	ENSMFAG00000046116 ##35	CHI3L2 (ENSMFAG00000037152)	DENND2D (ENSMFAG00000036546) #36	CEPT1 (ENSMFAG00000044191) #37
Cercopithecinae_b	ANCESTRAL SPECIES	1	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00510000047030.xb.a.d	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.b #17	ENSGT00390000000873.a.a #18	ENSGT00910000145979	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958.t.a.e #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00940000154557.c.a #35	ENSGT00940000154557.c.b ##35	ENSGT00940000163351	ENSGT00950000182931.A #36	ENSGT00950000183117.a.b #37	ENSGT01030000234578.B.b
Cercopithecinae_d	ANCESTRAL SPECIES	49	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00390000013102.e.a.m.b	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.b #17	ENSGT00390000000873.a.a #18	ENSGT00910000145979	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958.t.a.e #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00940000154557.c.a #35	ENSGT00940000154557.c.b ##35	ENSGT00940000163351	ENSGT00950000182931.A #36	ENSGT00950000183117.a.b #37	ENSGT01030000234578.B.b
Drill	MODERN SPECIES	1360	PHTF1 (ENSMLEG00000036566) #9	MAGI3 (ENSMLEG00000032185) #10	ENSMLEG00000037440	LRIG2 (ENSMLEG00000041869) #11	SLC16A1 (ENSMLEG00000039579) #12	TAFA3 (ENSMLEG00000035101) #13	PPM1J (ENSMLEG00000043770) #14	RHOC (ENSMLEG00000023164) #15	MOV10 (ENSMLEG00000001940) #16	CAPZA1 (ENSMLEG00000035737) #17	ENSMLEG00000035790	ENSMLEG00000034064	ST7L (ENSMLEG00000040496) #18	WNT2B (ENSMLEG00000032741) #19	CTTNBP2NL (ENSMLEG00000017567) #20	KCND3 (ENSMLEG00000042640) #22	DDX20 (ENSMLEG00000005722) #23	INKA2 (ENSMLEG00000022943) #24	RAP1A (ENSMLEG00000028596) #25	TMIGD3 (ENSMLEG00000043418) #27	C1orf162 (ENSMLEG00000032911) #28	ENSMLEG00000042629 #29	WDR77 (ENSMLEG00000038080) #30	OVGP1 (ENSMLEG00000038492) #31	PIFO (ENSMLEG00000030326) #32	CHIA (ENSMLEG00000043827) #35	ENSMLEG00000038064 ##35	CHI3L2 (ENSMLEG00000015156)	DENND2D (ENSMLEG00000043757) #36	CEPT1 (ENSMLEG00000043166) #37	DRAM2 (ENSMLEG00000032854)
Olive baboon	MODERN SPECIES		RSBN1 (ENSPANG00000019090) #8	PHTF1 (ENSPANG00000019967) #9	MAGI3 (ENSPANG00000016896) #10	LRIG2 (ENSPANG00000023528) #11	SLC16A1 (ENSPANG00000006341) #12	ENSPANG00000014057	TAFA3 (ENSPANG00000031926) #13	PPM1J (ENSPANG00000004417) #14	RHOC (ENSPANG00000014084) #15	MOV10 (ENSPANG00000011819) #16	CAPZA1 (ENSPANG00000016077) #17	ST7L (ENSPANG00000005529) #18	WNT2B (ENSPANG00000023529) #19	CTTNBP2NL (ENSPANG00000007192) #20	ENSPANG00000041941	KCND3 (ENSPANG00000009312) #22	DDX20 (ENSPANG00000017985) #23	INKA2 (ENSPANG00000005229) #24	RAP1A (ENSPANG00000013352) #25	TMIGD3 (ENSPANG00000013353) #27	C1orf162 (ENSPANG00000044615) #28	ATP5PB (ENSPANG00000004607) #29	WDR77 (ENSPANG00000012473) #30	OVGP1 (ENSPANG00000016078) #31	PIFO (ENSPANG00000008849) #32	CHIA (ENSPANG00000015724) #35	ENSPANG00000011949 ##35	CHI3L2 (ENSPANG00000004608)	DENND2D (ENSPANG00000013354) #36	CEPT1 (ENSPANG00000000567) #37	LRIF1 (ENSPANG00000006342)
Vervet Monkey	MODERN SPECIES	12	AP4B1 (ENSCSAG00000001639)	BCL2L15 (ENSCSAG00000001637)	PTPN22 (ENSCSAG00000001636) #7	RSBN1 (ENSCSAG00000001635) #8	MAGI3 (ENSCSAG00000001630) #10	LRIG2 (ENSCSAG00000001617) #11	SLC16A1 (ENSCSAG00000001611) #12	TAFA3 (ENSCSAG00000001609) #13	PPM1J (ENSCSAG00000001607) #14	RHOC (ENSCSAG00000001602) #15	MOV10 (ENSCSAG00000001600) #16	CAPZA1 (ENSCSAG00000001594) #17	ST7L (ENSCSAG00000001589) #18	WNT2B (ENSCSAG00000001587) #19	CTTNBP2NL (ENSCSAG00000001586) #20	KCND3 (ENSCSAG00000001583) #22	DDX20 (ENSCSAG00000001582) #23	INKA2 (ENSCSAG00000001581) #24	RAP1A (ENSCSAG00000001580) #25	TMIGD3 (ENSCSAG00000001579) #27	ENSCSAG00000000170	C1orf162 (ENSCSAG00000001578) #28	ATP5PB (ENSCSAG00000001577) #29	WDR77 (ENSCSAG00000001576) #30	OVGP1 (ENSCSAG00000001575) #31	PIFO (ENSCSAG00000001574) #32	ENSCSAG00000001573 ##35	CHI3L2 (ENSCSAG00000001572)	DENND2D (ENSCSAG00000001571) #36	CEPT1 (ENSCSAG00000001570) #37	DRAM2 (ENSCSAG00000001569)
Rhinopithecus	ANCESTRAL SPECIES	10	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000153298.n.a.a.a.b	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00510000047030.xb.a.d	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.b #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958.t.a.c.a #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00940000163644	ENSGT00390000001017 #32	ENSGT00940000154557.c.a #35	ENSGT00940000154557.c.b ##35	ENSGT00940000163351	ENSGT00950000182931.A #36	ENSGT00950000183117.a.b #37
Black snub-nosed monkey	MODERN SPECIES	299	PHTF1 (ENSRBIG00000033612) #9	MAGI3 (ENSRBIG00000030469) #10	ENSRBIG00000032312	ENSRBIG00000033233	LRIG2 (ENSRBIG00000032197) #11	SLC16A1 (ENSRBIG00000029892) #12	TAFA3 (ENSRBIG00000040034) #13	PPM1J (ENSRBIG00000030076) #14	RHOC (ENSRBIG00000040896) #15	MOV10 (ENSRBIG00000040802) #16	CAPZA1 (ENSRBIG00000015622) #17	ST7L (ENSRBIG00000042439) #18	WNT2B (ENSRBIG00000027268) #19	CTTNBP2NL (ENSRBIG00000038104) #20	ENSRBIG00000020563	KCND3 (ENSRBIG00000027724) #22	DDX20 (ENSRBIG00000030629) #23	INKA2 (ENSRBIG00000020811) #24	RAP1A (ENSRBIG00000016227) #25	TMIGD3 (ENSRBIG00000027992) #27	C1orf162 (ENSRBIG00000040804) #28	ENSRBIG00000036835 #29	WDR77 (ENSRBIG00000033413) #30	OVGP1 (ENSRBIG00000043088) #31	ENSRBIG00000028657	PIFO (ENSRBIG00000026378) #32	CHIA (ENSRBIG00000030484) #35	ENSRBIG00000035219 ##35	CHI3L2 (ENSRBIG00000028615)	DENND2D (ENSRBIG00000038291) #36	CEPT1 (ENSRBIG00000043839) #37
Golden snub-nosed monkey	MODERN SPECIES	3344		ENSRROG00000026617	ENSRROG00000035234	LRIG2 (ENSRROG00000045450) #11	SLC16A1 (ENSRROG00000045095) #12	ENSRROG00000042524	TAFA3 (ENSRROG00000044261) #13	PPM1J (ENSRROG00000042626) #14	RHOC (ENSRROG00000035409) #15	MOV10 (ENSRROG00000041135) #16	CAPZA1 (ENSRROG00000038535) #17	ST7L (ENSRROG00000036748) #18	WNT2B (ENSRROG00000033069) #19	CTTNBP2NL (ENSRROG00000031464) #20	ENSRROG00000009633	KCND3 (ENSRROG00000034849) #22	DDX20 (ENSRROG00000030608) #23	INKA2 (ENSRROG00000024632) #24	RAP1A (ENSRROG00000043025) #25	TMIGD3 (ENSRROG00000024975) #27	C1orf162 (ENSRROG00000027897) #28	ENSRROG00000037065 #29	WDR77 (ENSRROG00000043838) #30	OVGP1 (ENSRROG00000044113) #31	ENSRROG00000037346	PIFO (ENSRROG00000045188) #32	CHIA (ENSRROG00000029001) #35	ENSRROG00000044336 ##35	CHI3L2 (ENSRROG00000029297)	DENND2D (ENSRROG00000031952) #36	CEPT1 (ENSRROG00000025640) #37
Platyrrhini	ANCESTRAL SPECIES		ENSGT00390000018096	ENSGT00940000160958 #7	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.b #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958.t.a #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00940000154557.c.a #35	ENSGT00940000154557.c.b ##35	ENSGT00940000163351	ENSGT00950000182931.A #36	ENSGT00950000183117.a.b #37	ENSGT01030000234578.B.b
Cebidae	ANCESTRAL SPECIES	1	ENSGT00390000018096	ENSGT00940000160958 #7	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00940000154955.f #12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.b #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958.t.a #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00940000154557.c.a #35	ENSGT00940000154557.c.b ##35	ENSGT00940000163351	ENSGT00950000182931.A #36	ENSGT00950000183117.a.b #37	ENSGT01030000234578.B.b
Cebidae_a	ANCESTRAL SPECIES	41	ENSGT00940000160958 #7	ENSGT00390000001969.a #8	ENSGT00390000011648.b #9	ENSGT00940000156496 #10	ENSGT00940000158791 #11	ENSGT00390000008859.b.d.k.a.b	ENSGT00940000154955.f #12	ENSGT00940000155644 #13	ENSGT00940000160965 #14	ENSGT00950000182945.b.a.a.b.a #15	ENSGT00940000156024 #16	ENSGT00950000183119.a.e.a.d.b #17	ENSGT00390000000873.a.a #18	ENSGT00940000159166 #19	ENSGT00950000182852.B #20	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT00930000151073 #27	ENSGT00390000015005 #28	ENSGT00390000001958.t.a #29	ENSGT00390000010711 #30	ENSGT00940000162223 #31	ENSGT00390000001017 #32	ENSGT00940000154557.c.a #35	ENSGT00940000154557.c.b ##35	ENSGT00940000163351	ENSGT00950000182931.A #36	ENSGT00950000183117.a.b #37	ENSGT01030000234578.B.b
Bolivian squirrel monkey	MODERN SPECIES	98	MAGI3 (ENSSBOG00000034381) #10	LRIG2 (ENSSBOG00000024574) #11	ENSSBOG00000005704	ENSSBOG00000025769	SLC16A1 (ENSSBOG00000032694) #12	ENSSBOG00000011467	TAFA3 (ENSSBOG00000032256) #13	PPM1J (ENSSBOG00000030653) #14	ENSSBOG00000028169 #15	MOV10 (ENSSBOG00000005229) #16	ENSSBOG00000035311	CAPZA1 (ENSSBOG00000029789) #17	ST7L (ENSSBOG00000035753) #18	WNT2B (ENSSBOG00000034163) #19	CTTNBP2NL (ENSSBOG00000030528) #20	KCND3 (ENSSBOG00000022440) #22	DDX20 (ENSSBOG00000024789) #23	INKA2 (ENSSBOG00000033642) #24	RAP1A (ENSSBOG00000019474) #25	TMIGD3 (ENSSBOG00000031608) #27	C1orf162 (ENSSBOG00000035875) #28	ATP5PB (ENSSBOG00000018275) #29	ENSSBOG00000022640 #30	PIFO (ENSSBOG00000035544) #32	ENSSBOG00000034771	CHIA (ENSSBOG00000031858) #35	ENSSBOG00000035934 ##35	CHI3L2 (ENSSBOG00000031446)	DENND2D (ENSSBOG00000002690) #36	CEPT1 (ENSSBOG00000035378) #37	DRAM2 (ENSSBOG00000026655)
Capuchin	MODERN SPECIES	32	LRIG2 (ENSCCAG00000028440) #11	ENSCCAG00000029855	SLC16A1 (ENSCCAG00000035715) #12	ENSCCAG00000030295	ENSCCAG00000020811	ENSCCAG00000025186	TAFA3 (ENSCCAG00000036845) #13	PPM1J (ENSCCAG00000016743) #14	RHOC (ENSCCAG00000010980) #15	MOV10 (ENSCCAG00000034901) #16	CAPZA1 (ENSCCAG00000023499) #17	ST7L (ENSCCAG00000031301) #18	WNT2B (ENSCCAG00000030621) #19	CTTNBP2NL (ENSCCAG00000027542) #20	ENSCCAG00000026900	KCND3 (ENSCCAG00000036329) #22	DDX20 (ENSCCAG00000026759) #23	INKA2 (ENSCCAG00000035044) #24	RAP1A (ENSCCAG00000034175) #25	FILIP1 (ENSCCAG00000036105) ##20	TMEM30A (ENSCCAG00000025332)	ENSCCAG00000024466	COL12A1 (ENSCCAG00000029086)	ENSCCAG00000013592	CD109 (ENSCCAG00000027471)	SLC17A5 (ENSCCAG00000038020)	ENSCCAG00000033087	MTO1 (ENSCCAG00000020119)	CGAS (ENSCCAG00000024770)	DDX43 (ENSCCAG00000037349)	ENSCCAG00000031552
Marmoset	MODERN SPECIES	19	ENSCJAG00000045357	LRIG2 (ENSCJAG00000013709) #11	ENSCJAG00000072462	ENSCJAG00000071583	SLC16A1 (ENSCJAG00000039688) #12	ENSCJAG00000069199 #13	PPM1J (ENSCJAG00000013680) #14	RHOC (ENSCJAG00000042030) #15	MOV10 (ENSCJAG00000013592) #16	CAPZA1 (ENSCJAG00000013548) #17	ST7L (ENSCJAG00000013490) #18	WNT2B (ENSCJAG00000013473) #19	CTTNBP2NL (ENSCJAG00000058885) #20	ENSCJAG00000083135	DDX20 (ENSCJAG00000013428) #23	KCND3 (ENSCJAG00000013456) #22	RAP1A (ENSCJAG00000013392) #25	ENSCJAG00000084304	TMIGD3 (ENSCJAG00000013385) #27	C1orf162 (ENSCJAG00000013381) #28	ATP5PB (ENSCJAG00000013353) #29	WDR77 (ENSCJAG00000013344) #30	OVGP1 (ENSCJAG00000013301) #31	PIFO (ENSCJAG00000013286) #32	CHIA (ENSCJAG00000013278) #35	ENSCJAG00000013268 ##35	CHI3L2 (ENSCJAG00000013226)	DENND2D (ENSCJAG00000047311) #36	CEPT1 (ENSCJAG00000013188) #37	LRIF1 (ENSCJAG00000013162)	CD53 (ENSCJAG00000046967)
Mas night monkey	MODERN SPECIES	584																KCND3 (ENSANAG00000034908) #22	DDX20 (ENSANAG00000037881) #23	INKA2 (ENSANAG00000038060) #24	RAP1A (ENSANAG00000032359) #25	TMIGD3 (ENSANAG00000022347) #27	C1orf162 (ENSANAG00000027032) #28	ATP5PB (ENSANAG00000029496) #29	WDR77 (ENSANAG00000025377) #30	OVGP1 (ENSANAG00000028815) #31	PIFO (ENSANAG00000036074) #32	CHIA (ENSANAG00000023184) #35	ENSANAG00000021056 ##35	CHI3L2 (ENSANAG00000020426)	DENND2D (ENSANAG00000037260) #36	CEPT1 (ENSANAG00000037752) #37	DRAM2 (ENSANAG00000037008)
Tarsier	MODERN SPECIES	3828															CTTNBP2NL (ENSTSYG00000028603) #20	KCND3 (ENSTSYG00000000154) #22	DDX20 (ENSTSYG00000000153) #23