Eutheria	ANCESTRAL SPECIES		ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000169090	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00940000163644	ENSGT00940000162989.c	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00940000165936
Boreoeutheria	ANCESTRAL SPECIES		ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000169090	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00940000163644	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00940000165936	ENSGT00940000154557.c.b #33
Euarchontoglires	ANCESTRAL SPECIES		ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00940000163644	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00940000154557.c.b #33	ENSGT00940000165936	ENSGT00940000163351 #34
Primates	ANCESTRAL SPECIES	4	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00940000163644	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00940000163351 #34	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36
Haplorrhini	ANCESTRAL SPECIES	1	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000154720.b	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00940000163644	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00940000154557.c.b #33	ENSGT00940000163351 #34	ENSGT00950000182931.A #35
Simiiformes	ANCESTRAL SPECIES	3	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.b #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000154720.b.pb	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.t.a #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00940000163644	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00940000154557.c.b #33	ENSGT00940000163351 #34	ENSGT00950000182931.A #35
Catarrhini	ANCESTRAL SPECIES	3	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.b #18	ENSGT00390000000873.a.a #19	ENSGT00910000145979	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000154720.b.pb	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.t.a #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00940000163644	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00940000154557.c.b #33	ENSGT00940000163351 #34	ENSGT00950000182931.A #35
Hominoidea	ANCESTRAL SPECIES	3	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00390000000475.sb.u #8	ENSGT00390000013102.e.a.m.b	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.b #18	ENSGT00390000000873.a.a #19	ENSGT00910000145979	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.t.a #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00940000154557.c.b #33	ENSGT00940000163351 #34	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36
Hominidae	ANCESTRAL SPECIES	3	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00390000000475.sb.u.e #8	ENSGT00390000013102.e.a.m.b	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.b #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.t.a #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00940000154557.c.b #33	ENSGT00940000163351 #34	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	3	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00390000000475.sb.u.e #8	ENSGT00390000013102.e.a.m.b	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.b #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.t.a #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00940000154557.c.b #33	ENSGT00940000163351 #34	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36
Homo/Pan group	ANCESTRAL SPECIES	4	ENSGT00390000018096	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.b #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.t.a #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00940000154557.c.b #33	ENSGT00940000163351 #34	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36
Pan	ANCESTRAL SPECIES		ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000163704.h #12	ENSGT00910000148129 #13	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.b #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.t.a #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00940000154557.c.b #33	ENSGT00940000163351 #34	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36	ENSGT01030000234578.B.b #37
Chimpanzee	MODERN SPECIES		ENSPTRG00000052291 #7	ENSPTRG00000049946 #8	ENSPTRG00000051751 #9	LRIG2 (ENSPTRG00000001120) #10	SLC16A1 (ENSPTRG00000001116) #11	ENSPTRG00000043085 #12	ENSPTRG00000051943 #13	TAFA3 (ENSPTRG00000001114) #14	PPM1J (ENSPTRG00000001113) #15	RHOC (ENSPTRG00000001112) #16	MOV10 (ENSPTRG00000001111) #17	CAPZA1 (ENSPTRG00000001110) #18	ST7L (ENSPTRG00000001109) #19	WNT2B (ENSPTRG00000001108) #20	CTTNBP2NL (ENSPTRG00000001107) #21	KCND3 (ENSPTRG00000001106) #22	DDX20 (ENSPTRG00000001105) #23	INKA2 (ENSPTRG00000001104) #24	RAP1A (ENSPTRG00000001102) #25	TMIGD3 (ENSPTRG00000001101) #26	C1H1orf162 (ENSPTRG00000001100) #27	ATP5PB (ENSPTRG00000001099) #28	WDR77 (ENSPTRG00000001098) #29	OVGP1 (ENSPTRG00000001097) #30	PIFO (ENSPTRG00000001095) #31	CHIA (ENSPTRG00000049663) #32	ENSPTRG00000045154 #33	CHI3L2 (ENSPTRG00000001092) #34	DENND2D (ENSPTRG00000001090) #35	CEPT1 (ENSPTRG00000001089) #36	DRAM2 (ENSPTRG00000001087) #37
Bonobo	MODERN SPECIES		PTPN22 (ENSPPAG00000036012)	RSBN1 (ENSPPAG00000028704)	PHTF1 (ENSPPAG00000028420)	ENSPPAG00000038598	SLC16A1 (ENSPPAG00000031036) #11	ENSPPAG00000028885 #12	ENSPPAG00000002404 #13	TAFA3 (ENSPPAG00000026811) #14	PPM1J (ENSPPAG00000023616) #15	RHOC (ENSPPAG00000032447) #16	MOV10 (ENSPPAG00000031079) #17	CAPZA1 (ENSPPAG00000033937) #18	ST7L (ENSPPAG00000037378) #19	WNT2B (ENSPPAG00000026756) #20	CTTNBP2NL (ENSPPAG00000028003) #21	KCND3 (ENSPPAG00000039961) #22	DDX20 (ENSPPAG00000031680) #23	INKA2 (ENSPPAG00000021509) #24	RAP1A (ENSPPAG00000040050) #25	TMIGD3 (ENSPPAG00000035113) #26	C1orf162 (ENSPPAG00000037238) #27	ENSPPAG00000040192 #28	WDR77 (ENSPPAG00000038773) #29	OVGP1 (ENSPPAG00000025014) #30	PIFO (ENSPPAG00000005642) #31	CHIA (ENSPPAG00000022214) #32	ENSPPAG00000034524 #33	CHI3L2 (ENSPPAG00000038288) #34	DENND2D (ENSPPAG00000037282) #35	CEPT1 (ENSPPAG00000043162) #36	DRAM2 (ENSPPAG00000033552) #37
Human	MODERN SPECIES		PTPN22 (ENSG00000134242)	RSBN1 (ENSG00000081019)	PHTF1 (ENSG00000116793)	MAGI3 (ENSG00000081026)	LRIG2 (ENSG00000198799) #10	SLC16A1 (ENSG00000155380) #11	TAFA3 (ENSG00000184599) #14	PPM1J (ENSG00000155367) #15	ENSG00000271810	RHOC (ENSG00000155366) #16	MOV10 (ENSG00000155363) #17	CAPZA1 (ENSG00000116489) #18	ST7L (ENSG00000007341) #19	WNT2B (ENSG00000134245) #20	CTTNBP2NL (ENSG00000143079) #21	KCND3 (ENSG00000171385) #22	DDX20 (ENSG00000064703) #23	INKA2 (ENSG00000197852) #24	RAP1A (ENSG00000116473) #25	ADORA3 (ENSG00000282608)	TMIGD3 (ENSG00000121933) #26	C1orf162 (ENSG00000143110) #27	ATP5PB (ENSG00000116459) #28	WDR77 (ENSG00000116455) #29	OVGP1 (ENSG00000085465) #30	PIFO (ENSG00000173947) #31	CHIA (ENSG00000134216) #32	CHI3L2 (ENSG00000064886) #34	DENND2D (ENSG00000162777) #35	CEPT1 (ENSG00000134255) #36	DRAM2 (ENSG00000156171) #37
Gorilla	MODERN SPECIES		ENSGGOG00000026153 #8	ENSGGOG00000023056	LRIG2 (ENSGGOG00000022639) #10	ENSGGOG00000037334 #13	SLC16A1 (ENSGGOG00000015526) #11	ENSGGOG00000037218	TAFA3 (ENSGGOG00000002749) #14	PPM1J (ENSGGOG00000002743) #15	RHOC (ENSGGOG00000002741) #16	MOV10 (ENSGGOG00000002731) #17	ENSGGOG00000038612	ENSGGOG00000022483	ST7L (ENSGGOG00000034881) #19	WNT2B (ENSGGOG00000003613) #20	CTTNBP2NL (ENSGGOG00000002231) #21	KCND3 (ENSGGOG00000015582) #22	DDX20 (ENSGGOG00000015576) #23	INKA2 (ENSGGOG00000027861) #24	ENSGGOG00000003037	TMIGD3 (ENSGGOG00000005924) #26	C1orf162 (ENSGGOG00000005921) #27	ATP5PB (ENSGGOG00000005215) #28	WDR77 (ENSGGOG00000005208) #29	OVGP1 (ENSGGOG00000005204) #30	PIFO (ENSGGOG00000008535) #31	CHIA (ENSGGOG00000008523) #32	ENSGGOG00000039604 #33	ENSGGOG00000039363 #34	ENSGGOG00000016018 #34	DENND2D (ENSGGOG00000001542) #35	CEPT1 (ENSGGOG00000009575) #36
Orangutan	MODERN SPECIES		MAGI3 (ENSPPYG00000001011)	ENSPPYG00000032770 #8	ENSPPYG00000034824	LRIG2 (ENSPPYG00000001013) #10	SLC16A1 (ENSPPYG00000001014) #11	ENSPPYG00000041354	ENSPPYG00000001016 #13	ENSPPYG00000035274	ENSPPYG00000001017 #14	RHOC (ENSPPYG00000001018) #15	MOV10 (ENSPPYG00000001020) #17	CAPZA1 (ENSPPYG00000001021) #18	ST7L (ENSPPYG00000001022) #19	WNT2B (ENSPPYG00000001023) #20	CTTNBP2NL (ENSPPYG00000001024) #21	KCND3 (ENSPPYG00000001025) #22	DDX20 (ENSPPYG00000001026) #23	INKA2 (ENSPPYG00000001027) #24	RAP1A (ENSPPYG00000001028) #25	TMIGD3 (ENSPPYG00000001030) #26	ATP5PB (ENSPPYG00000001032) #28	C1orf162 (ENSPPYG00000001031) #27	WDR77 (ENSPPYG00000001033) #29	OVGP1 (ENSPPYG00000001034) #30	ENSPPYG00000037725	ENSPPYG00000001035 #31	CHIA (ENSPPYG00000001036) #32	ENSPPYG00000001037 #33	CHI3L2 (ENSPPYG00000001038) #34	DENND2D (ENSPPYG00000001039) #35	CEPT1 (ENSPPYG00000001040) #36
Gibbon	MODERN SPECIES	2	RSBN1 (ENSNLEG00000004426)	PHTF1 (ENSNLEG00000004383)	MAGI3 (ENSNLEG00000004350)	LRIG2 (ENSNLEG00000004313) #10	SLC16A1 (ENSNLEG00000004297) #11	ENSNLEG00000004286	PPM1J (ENSNLEG00000004240) #15	RHOC (ENSNLEG00000004234) #16	MOV10 (ENSNLEG00000004226) #17	CAPZA1 (ENSNLEG00000028431) #18	ST7L (ENSNLEG00000004126) #19	ENSNLEG00000004065	WNT2B (ENSNLEG00000004104) #20	CTTNBP2NL (ENSNLEG00000004112) #21	ENSNLEG00000033662	KCND3 (ENSNLEG00000004095) #22	DDX20 (ENSNLEG00000004040) #23	INKA2 (ENSNLEG00000004037) #24	RAP1A (ENSNLEG00000004018) #25	TMIGD3 (ENSNLEG00000028673) #26	C1orf162 (ENSNLEG00000027786) #27	ATP5PB (ENSNLEG00000003971) #28	WDR77 (ENSNLEG00000003918) #29	OVGP1 (ENSNLEG00000003907) #30	ENSNLEG00000033638	PIFO (ENSNLEG00000003881) #31	CHIA (ENSNLEG00000003831) #32	ENSNLEG00000030395 #33	CHI3L2 (ENSNLEG00000003769) #34	DENND2D (ENSNLEG00000003758) #35	CEPT1 (ENSNLEG00000003741) #36
Cercopithecidae	ANCESTRAL SPECIES	2	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00510000047030.xb.a.d	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.b #18	ENSGT00390000000873.a.a #19	ENSGT00910000145979	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000154720.b.pb	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.t.a #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00940000163644	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00940000154557.c.b #33	ENSGT00940000163351 #34	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36
Cercopithecinae	ANCESTRAL SPECIES		ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00510000047030.xb.a.d	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.b #18	ENSGT00390000000873.a.a #19	ENSGT00910000145979	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT00930000151073 #26	ENSGT00950000182857.a.a.b.a.r.a.b.b.b.a	ENSGT00390000015005 #27	ENSGT00390000001958.t.a #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00940000154557.c.b #33	ENSGT00940000163351 #34	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00510000047030.xb.a.d	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.b #18	ENSGT00390000000873.a.a #19	ENSGT00910000145979	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT00930000151073 #26	ENSGT00950000182857.a.a.b.a.r.a.b.b.b.a	ENSGT00390000015005 #27	ENSGT00390000001958.t.a #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00940000154557.c.b #33	ENSGT00940000163351 #34	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36
Macaca	ANCESTRAL SPECIES		ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.b #18	ENSGT00390000000873.a.a #19	ENSGT00910000145979	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT00930000151073 #26	ENSGT00950000182857.a.a.b.a.r.a.b.b.b.a	ENSGT00390000015005 #27	ENSGT00390000001958.t.a.g #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00940000154557.c.b #33	ENSGT00940000163351 #34	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36
Pig-tailed macaque	MODERN SPECIES	556	MAGI3 (ENSMNEG00000033832)	ENSMNEG00000035375 #8	ENSMNEG00000029222	LRIG2 (ENSMNEG00000043055) #10	SLC16A1 (ENSMNEG00000041688) #11	ENSMNEG00000036594	TAFA3 (ENSMNEG00000026429) #14	PPM1J (ENSMNEG00000034093) #15	RHOC (ENSMNEG00000036794) #16	MOV10 (ENSMNEG00000040033) #17	CAPZA1 (ENSMNEG00000032031) #18	ST7L (ENSMNEG00000041208) #19	ENSMNEG00000032002	WNT2B (ENSMNEG00000037237) #20	CTTNBP2NL (ENSMNEG00000036126) #21	KCND3 (ENSMNEG00000035414) #22	DDX20 (ENSMNEG00000005757) #23	INKA2 (ENSMNEG00000040750) #24	RAP1A (ENSMNEG00000031184) #25	TMIGD3 (ENSMNEG00000038209) #26	ENSMNEG00000005161	C1orf162 (ENSMNEG00000034601) #27	ENSMNEG00000041454 #28	WDR77 (ENSMNEG00000030129) #29	OVGP1 (ENSMNEG00000036501) #30	PIFO (ENSMNEG00000027237) #31	CHIA (ENSMNEG00000032841) #32	ENSMNEG00000029808 #33	CHI3L2 (ENSMNEG00000037931) #34	DENND2D (ENSMNEG00000039934) #35	CEPT1 (ENSMNEG00000039798) #36
Macaca_a	ANCESTRAL SPECIES		ENSGT00940000158791 #10	ENSGT01100000263676.b.b.a.c.a	ENSGT00940000154955.f #11	ENSGT01100000263539.b.a.b.b.b.b.b	ENSGT00510000047030.xb.a.d	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.b #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00390000018566.i.d	ENSGT00950000182852.B #21	ENSGT01100000263493.a.a.a.b.a.a.b.a.b.b.a	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT00930000151073 #26	ENSGT00950000182857.a.a.b.a.r.a.b.b.b.a	ENSGT00390000015005 #27	ENSGT00390000001958.t.a.g #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00940000154557.c.b #33	ENSGT00940000163351 #34	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36
Rhesus	MODERN SPECIES		PHTF1 (ENSMMUG00000017819)	MAGI3 (ENSMMUG00000017817)	LRIG2 (ENSMMUG00000019098) #10	ENSMMUG00000064630	SLC16A1 (ENSMMUG00000006171) #11	ENSMMUG00000057278	TAFA3 (ENSMMUG00000058665) #14	PPM1J (ENSMMUG00000007767) #15	MOV10 (ENSMMUG00000059489) #17	CAPZA1 (ENSMMUG00000015668) #18	ST7L (ENSMMUG00000007766) #19	WNT2B (ENSMMUG00000007765) #20	ENSMMUG00000037458	CTTNBP2NL (ENSMMUG00000018455) #21	ENSMMUG00000057625	KCND3 (ENSMMUG00000050825) #22	DDX20 (ENSMMUG00000014489) #23	INKA2 (ENSMMUG00000052184) #24	RAP1A (ENSMMUG00000014486) #25	TMIGD3 (ENSMMUG00000003581) #26	C1H1orf162 (ENSMMUG00000003579) #27	ATP5PB (ENSMMUG00000065322) #28	OVGP1 (ENSMMUG00000003309) #30	PIFO (ENSMMUG00000053581) #31	CHIA (ENSMMUG00000008857) #32	ENSMMUG00000002454 #33	CHI3L2 (ENSMMUG00000002455) #34	DENND2D (ENSMMUG00000049470) #35	CEPT1 (ENSMMUG00000002461) #36	LRIF1 (ENSMMUG00000000812)	CD53 (ENSMMUG00000000811)
Crab-eating macaque	MODERN SPECIES		ENSMFAG00000062348	ENSMFAG00000047894	SLC16A1 (ENSMFAG00000035894) #11	ENSMFAG00000050047	ENSMFAG00000053511	ENSMFAG00000027212	ENSMFAG00000064876 #14	MOV10 (ENSMFAG00000002283) #17	ENSMFAG00000001491 #16	CAPZA1 (ENSMFAG00000035179) #18	ST7L (ENSMFAG00000037326) #19	WNT2B (ENSMFAG00000002295) #20	ENSMFAG00000007433	CTTNBP2NL (ENSMFAG00000054875) #21	ENSMFAG00000061193	KCND3 (ENSMFAG00000002047) #22	DDX20 (ENSMFAG00000031755) #23	INKA2 (ENSMFAG00000038293) #24	RAP1A (ENSMFAG00000034202) #25	TMIGD3 (ENSMFAG00000002528) #26	ENSMFAG00000011493	C1orf162 (ENSMFAG00000034319) #27	ATP5PB (ENSMFAG00000037534) #28	WDR77 (ENSMFAG00000030055) #29	OVGP1 (ENSMFAG00000034315) #30	PIFO (ENSMFAG00000038084) #31	CHIA (ENSMFAG00000003339) #32	ENSMFAG00000046116 #33	CHI3L2 (ENSMFAG00000037152) #34	DENND2D (ENSMFAG00000036546) #35	CEPT1 (ENSMFAG00000044191) #36
Cercopithecinae_b	ANCESTRAL SPECIES	1	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00510000047030.xb.a.d	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.b #18	ENSGT00390000000873.a.a #19	ENSGT00910000145979	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.t.a.e #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00940000154557.c.b #33	ENSGT00940000163351 #34	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36	ENSGT01030000234578.B.b #37
Cercopithecinae_d	ANCESTRAL SPECIES	49	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00390000013102.e.a.m.b	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.b #18	ENSGT00390000000873.a.a #19	ENSGT00910000145979	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.t.a.e #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00940000154557.c.b #33	ENSGT00940000163351 #34	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36	ENSGT01030000234578.B.b #37
Drill	MODERN SPECIES	1360	PHTF1 (ENSMLEG00000036566)	MAGI3 (ENSMLEG00000032185)	ENSMLEG00000037440 #8	LRIG2 (ENSMLEG00000041869) #10	SLC16A1 (ENSMLEG00000039579) #11	TAFA3 (ENSMLEG00000035101) #14	PPM1J (ENSMLEG00000043770) #15	RHOC (ENSMLEG00000023164) #16	MOV10 (ENSMLEG00000001940) #17	CAPZA1 (ENSMLEG00000035737) #18	ENSMLEG00000035790	ENSMLEG00000034064	ST7L (ENSMLEG00000040496) #19	WNT2B (ENSMLEG00000032741) #20	CTTNBP2NL (ENSMLEG00000017567) #21	KCND3 (ENSMLEG00000042640) #22	DDX20 (ENSMLEG00000005722) #23	INKA2 (ENSMLEG00000022943) #24	RAP1A (ENSMLEG00000028596) #25	TMIGD3 (ENSMLEG00000043418) #26	C1orf162 (ENSMLEG00000032911) #27	ENSMLEG00000042629 #28	WDR77 (ENSMLEG00000038080) #29	OVGP1 (ENSMLEG00000038492) #30	PIFO (ENSMLEG00000030326) #31	CHIA (ENSMLEG00000043827) #32	ENSMLEG00000038064 #33	CHI3L2 (ENSMLEG00000015156) #34	DENND2D (ENSMLEG00000043757) #35	CEPT1 (ENSMLEG00000043166) #36	DRAM2 (ENSMLEG00000032854) #37
Olive baboon	MODERN SPECIES		RSBN1 (ENSPANG00000019090)	PHTF1 (ENSPANG00000019967)	MAGI3 (ENSPANG00000016896)	LRIG2 (ENSPANG00000023528) #10	SLC16A1 (ENSPANG00000006341) #11	ENSPANG00000014057	TAFA3 (ENSPANG00000031926) #14	PPM1J (ENSPANG00000004417) #15	RHOC (ENSPANG00000014084) #16	MOV10 (ENSPANG00000011819) #17	CAPZA1 (ENSPANG00000016077) #18	ST7L (ENSPANG00000005529) #19	WNT2B (ENSPANG00000023529) #20	CTTNBP2NL (ENSPANG00000007192) #21	ENSPANG00000041941	KCND3 (ENSPANG00000009312) #22	DDX20 (ENSPANG00000017985) #23	INKA2 (ENSPANG00000005229) #24	RAP1A (ENSPANG00000013352) #25	TMIGD3 (ENSPANG00000013353) #26	C1orf162 (ENSPANG00000044615) #27	ATP5PB (ENSPANG00000004607) #28	WDR77 (ENSPANG00000012473) #29	OVGP1 (ENSPANG00000016078) #30	PIFO (ENSPANG00000008849) #31	CHIA (ENSPANG00000015724) #32	ENSPANG00000011949 #33	CHI3L2 (ENSPANG00000004608) #34	DENND2D (ENSPANG00000013354) #35	CEPT1 (ENSPANG00000000567) #36	LRIF1 (ENSPANG00000006342)
Vervet Monkey	MODERN SPECIES	12	AP4B1 (ENSCSAG00000001639)	BCL2L15 (ENSCSAG00000001637)	PTPN22 (ENSCSAG00000001636)	RSBN1 (ENSCSAG00000001635)	MAGI3 (ENSCSAG00000001630)	LRIG2 (ENSCSAG00000001617) #10	SLC16A1 (ENSCSAG00000001611) #11	TAFA3 (ENSCSAG00000001609) #14	PPM1J (ENSCSAG00000001607) #15	RHOC (ENSCSAG00000001602) #16	MOV10 (ENSCSAG00000001600) #17	CAPZA1 (ENSCSAG00000001594) #18	ST7L (ENSCSAG00000001589) #19	WNT2B (ENSCSAG00000001587) #20	CTTNBP2NL (ENSCSAG00000001586) #21	KCND3 (ENSCSAG00000001583) #22	DDX20 (ENSCSAG00000001582) #23	INKA2 (ENSCSAG00000001581) #24	RAP1A (ENSCSAG00000001580) #25	TMIGD3 (ENSCSAG00000001579) #26	ENSCSAG00000000170	C1orf162 (ENSCSAG00000001578) #27	ATP5PB (ENSCSAG00000001577) #28	WDR77 (ENSCSAG00000001576) #29	OVGP1 (ENSCSAG00000001575) #30	PIFO (ENSCSAG00000001574) #31	ENSCSAG00000001573 #33	CHI3L2 (ENSCSAG00000001572) #34	DENND2D (ENSCSAG00000001571) #35	CEPT1 (ENSCSAG00000001570) #36	DRAM2 (ENSCSAG00000001569) #37
Rhinopithecus	ANCESTRAL SPECIES	10	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000153298.n.a.a.a.b	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00510000047030.xb.a.d	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.b #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.t.a.c.a #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00940000163644	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00940000154557.c.b #33	ENSGT00940000163351 #34	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36
Black snub-nosed monkey	MODERN SPECIES	299	PHTF1 (ENSRBIG00000033612)	MAGI3 (ENSRBIG00000030469)	ENSRBIG00000032312 #8	ENSRBIG00000033233	LRIG2 (ENSRBIG00000032197) #10	SLC16A1 (ENSRBIG00000029892) #11	TAFA3 (ENSRBIG00000040034) #14	PPM1J (ENSRBIG00000030076) #15	RHOC (ENSRBIG00000040896) #16	MOV10 (ENSRBIG00000040802) #17	CAPZA1 (ENSRBIG00000015622) #18	ST7L (ENSRBIG00000042439) #19	WNT2B (ENSRBIG00000027268) #20	CTTNBP2NL (ENSRBIG00000038104) #21	ENSRBIG00000020563	KCND3 (ENSRBIG00000027724) #22	DDX20 (ENSRBIG00000030629) #23	INKA2 (ENSRBIG00000020811) #24	RAP1A (ENSRBIG00000016227) #25	TMIGD3 (ENSRBIG00000027992) #26	C1orf162 (ENSRBIG00000040804) #27	ENSRBIG00000036835 #28	WDR77 (ENSRBIG00000033413) #29	OVGP1 (ENSRBIG00000043088) #30	ENSRBIG00000028657	PIFO (ENSRBIG00000026378) #31	CHIA (ENSRBIG00000030484) #32	ENSRBIG00000035219 #33	CHI3L2 (ENSRBIG00000028615) #34	DENND2D (ENSRBIG00000038291) #35	CEPT1 (ENSRBIG00000043839) #36
Golden snub-nosed monkey	MODERN SPECIES	3344		ENSRROG00000026617 #8	ENSRROG00000035234	LRIG2 (ENSRROG00000045450) #10	SLC16A1 (ENSRROG00000045095) #11	ENSRROG00000042524	TAFA3 (ENSRROG00000044261) #14	PPM1J (ENSRROG00000042626) #15	RHOC (ENSRROG00000035409) #16	MOV10 (ENSRROG00000041135) #17	CAPZA1 (ENSRROG00000038535) #18	ST7L (ENSRROG00000036748) #19	WNT2B (ENSRROG00000033069) #20	CTTNBP2NL (ENSRROG00000031464) #21	ENSRROG00000009633	KCND3 (ENSRROG00000034849) #22	DDX20 (ENSRROG00000030608) #23	INKA2 (ENSRROG00000024632) #24	RAP1A (ENSRROG00000043025) #25	TMIGD3 (ENSRROG00000024975) #26	C1orf162 (ENSRROG00000027897) #27	ENSRROG00000037065 #28	WDR77 (ENSRROG00000043838) #29	OVGP1 (ENSRROG00000044113) #30	ENSRROG00000037346	PIFO (ENSRROG00000045188) #31	CHIA (ENSRROG00000029001) #32	ENSRROG00000044336 #33	CHI3L2 (ENSRROG00000029297) #34	DENND2D (ENSRROG00000031952) #35	CEPT1 (ENSRROG00000025640) #36
Platyrrhini	ANCESTRAL SPECIES		ENSGT00390000018096	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.b #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.t.a #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00940000154557.c.b #33	ENSGT00940000163351 #34	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36	ENSGT01030000234578.B.b #37
Cebidae	ANCESTRAL SPECIES	1	ENSGT00390000018096	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.b #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.t.a #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00940000154557.c.b #33	ENSGT00940000163351 #34	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36	ENSGT01030000234578.B.b #37
Cebidae_a	ANCESTRAL SPECIES	41	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00390000008859.b.d.k.a.b	ENSGT00940000154955.f #11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.b #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.g #25	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.t.a #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00940000154557.c.b #33	ENSGT00940000163351 #34	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36	ENSGT01030000234578.B.b #37
Bolivian squirrel monkey	MODERN SPECIES	98	MAGI3 (ENSSBOG00000034381)	LRIG2 (ENSSBOG00000024574) #10	ENSSBOG00000005704	ENSSBOG00000025769	SLC16A1 (ENSSBOG00000032694) #11	ENSSBOG00000011467	TAFA3 (ENSSBOG00000032256) #14	PPM1J (ENSSBOG00000030653) #15	ENSSBOG00000028169 #16	MOV10 (ENSSBOG00000005229) #17	ENSSBOG00000035311	CAPZA1 (ENSSBOG00000029789) #18	ST7L (ENSSBOG00000035753) #19	WNT2B (ENSSBOG00000034163) #20	CTTNBP2NL (ENSSBOG00000030528) #21	KCND3 (ENSSBOG00000022440) #22	DDX20 (ENSSBOG00000024789) #23	INKA2 (ENSSBOG00000033642) #24	RAP1A (ENSSBOG00000019474) #25	TMIGD3 (ENSSBOG00000031608) #26	C1orf162 (ENSSBOG00000035875) #27	ATP5PB (ENSSBOG00000018275) #28	ENSSBOG00000022640 #29	PIFO (ENSSBOG00000035544) #31	ENSSBOG00000034771	CHIA (ENSSBOG00000031858) #32	ENSSBOG00000035934 #33	CHI3L2 (ENSSBOG00000031446) #34	DENND2D (ENSSBOG00000002690) #35	CEPT1 (ENSSBOG00000035378) #36	DRAM2 (ENSSBOG00000026655) #37
Capuchin	MODERN SPECIES	32	LRIG2 (ENSCCAG00000028440) #10	ENSCCAG00000029855	SLC16A1 (ENSCCAG00000035715) #11	ENSCCAG00000030295	ENSCCAG00000020811	ENSCCAG00000025186	TAFA3 (ENSCCAG00000036845) #14	PPM1J (ENSCCAG00000016743) #15	RHOC (ENSCCAG00000010980) #16	MOV10 (ENSCCAG00000034901) #17	CAPZA1 (ENSCCAG00000023499) #18	ST7L (ENSCCAG00000031301) #19	WNT2B (ENSCCAG00000030621) #20	CTTNBP2NL (ENSCCAG00000027542) #21	ENSCCAG00000026900	KCND3 (ENSCCAG00000036329) #22	DDX20 (ENSCCAG00000026759) #23	INKA2 (ENSCCAG00000035044) #24	RAP1A (ENSCCAG00000034175) #25	FILIP1 (ENSCCAG00000036105) ##21	TMEM30A (ENSCCAG00000025332)	ENSCCAG00000024466	COL12A1 (ENSCCAG00000029086)	ENSCCAG00000013592	CD109 (ENSCCAG00000027471)	SLC17A5 (ENSCCAG00000038020)	ENSCCAG00000033087	MTO1 (ENSCCAG00000020119)	CGAS (ENSCCAG00000024770)	DDX43 (ENSCCAG00000037349)	ENSCCAG00000031552
Marmoset	MODERN SPECIES	19	ENSCJAG00000045357	LRIG2 (ENSCJAG00000013709) #10	ENSCJAG00000072462	ENSCJAG00000071583	SLC16A1 (ENSCJAG00000039688) #11	ENSCJAG00000069199 #14	PPM1J (ENSCJAG00000013680) #15	RHOC (ENSCJAG00000042030) #16	MOV10 (ENSCJAG00000013592) #17	CAPZA1 (ENSCJAG00000013548) #18	ST7L (ENSCJAG00000013490) #19	WNT2B (ENSCJAG00000013473) #20	CTTNBP2NL (ENSCJAG00000058885) #21	ENSCJAG00000083135	DDX20 (ENSCJAG00000013428) #23	KCND3 (ENSCJAG00000013456) #22	RAP1A (ENSCJAG00000013392) #25	ENSCJAG00000084304	TMIGD3 (ENSCJAG00000013385) #26	C1orf162 (ENSCJAG00000013381) #27	ATP5PB (ENSCJAG00000013353) #28	WDR77 (ENSCJAG00000013344) #29	OVGP1 (ENSCJAG00000013301) #30	PIFO (ENSCJAG00000013286) #31	CHIA (ENSCJAG00000013278) #32	ENSCJAG00000013268 #33	CHI3L2 (ENSCJAG00000013226) #34	DENND2D (ENSCJAG00000047311) #35	CEPT1 (ENSCJAG00000013188) #36	LRIF1 (ENSCJAG00000013162)	CD53 (ENSCJAG00000046967)
Mas night monkey	MODERN SPECIES	584																KCND3 (ENSANAG00000034908) #22	DDX20 (ENSANAG00000037881) #23	INKA2 (ENSANAG00000038060) #24	RAP1A (ENSANAG00000032359) #25	TMIGD3 (ENSANAG00000022347) #26	C1orf162 (ENSANAG00000027032) #27	ATP5PB (ENSANAG00000029496) #28	WDR77 (ENSANAG00000025377) #29	OVGP1 (ENSANAG00000028815) #30	PIFO (ENSANAG00000036074) #31	CHIA (ENSANAG00000023184) #32	ENSANAG00000021056 #33	CHI3L2 (ENSANAG00000020426) #34	DENND2D (ENSANAG00000037260) #35	CEPT1 (ENSANAG00000037752) #36	DRAM2 (ENSANAG00000037008) #37
Tarsier	MODERN SPECIES	3828															CTTNBP2NL (ENSTSYG00000028603) #21	KCND3 (ENSTSYG00000000154) #22	DDX20 (ENSTSYG00000000153) #23
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.p #28	ENSGT00390000010711 #29	ENSGT00940000163644	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00940000163351 #34	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36	ENSGT01030000234578.B.b #37
Lemuriformes	ANCESTRAL SPECIES		ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.p #28	ENSGT00390000010711 #29	ENSGT00940000163644	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00940000163351 #34	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36	ENSGT01030000234578.B.b #37	ENSGT00390000017353
Lemuriformes_a	ANCESTRAL SPECIES	31	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.p #28	ENSGT00390000010711 #29	ENSGT00940000163644	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00940000163351 #34	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36	ENSGT01030000234578.B.b #37	ENSGT00390000017353
Greater bamboo lemur	MODERN SPECIES	507								TAFA3 (ENSPSMG00000009787) #14	PPM1J (ENSPSMG00000009821) #15	RHOC (ENSPSMG00000009860) #16	MOV10 (ENSPSMG00000009983) #17	CAPZA1 (ENSPSMG00000010026) #18	ST7L (ENSPSMG00000010180) #19	WNT2B (ENSPSMG00000010388) #20	CTTNBP2NL (ENSPSMG00000010396) #21	KCND3 (ENSPSMG00000010421) #22	ENSPSMG00000010429	DDX20 (ENSPSMG00000010456) #23	ENSPSMG00000010468	RAP1A (ENSPSMG00000010516) #25	TMIGD3 (ENSPSMG00000010613) #26	C1orf162 (ENSPSMG00000010617) #27	ATP5PB (ENSPSMG00000010639) #28	WDR77 (ENSPSMG00000010667) #29	ENSPSMG00000010689	PIFO (ENSPSMG00000010697) #31	CHI3L2 (ENSPSMG00000010734) #34	ENSPSMG00000010739	DENND2D (ENSPSMG00000010765) #35	CEPT1 (ENSPSMG00000010781) #36	DRAM2 (ENSPSMG00000010794) #37
Mouse lemur	MODERN SPECIES	11	RSBN1 (ENSMICG00000001369)	PHTF1 (ENSMICG00000001360)	MAGI3 (ENSMICG00000042078)	LRIG2 (ENSMICG00000001333) #10	ENSMICG00000030251	ENSMICG00000012818 #11	TAFA3 (ENSMICG00000003208) #14	PPM1J (ENSMICG00000035392) #15	RHOC (ENSMICG00000003200) #16	MOV10 (ENSMICG00000003187) #17	CAPZA1 (ENSMICG00000003182) #18	ST7L (ENSMICG00000003173) #19	WNT2B (ENSMICG00000003171) #20	ENSMICG00000017384	CTTNBP2NL (ENSMICG00000009868) #21	KCND3 (ENSMICG00000046146) #22	DDX20 (ENSMICG00000011509) #23	INKA2 (ENSMICG00000033017) #24	ENSMICG00000011501 #25	ADORA3 (ENSMICG00000031902)	ENSMICG00000000880	CRYZ (ENSMICG00000015873)	TYW3 (ENSMICG00000015883)	LHX8 (ENSMICG00000012199)	SLC44A5 (ENSMICG00000012206)	ACADM (ENSMICG00000017809)	ENSMICG00000017810	MSH4 (ENSMICG00000017811)	ASB17 (ENSMICG00000042539)	ENSMICG00000026387 ##7	ENSMICG00000042274
Bushbaby	MODERN SPECIES	188	BCL2L15 (ENSOGAG00000013916)	PTPN22 (ENSOGAG00000013912)	RSBN1 (ENSOGAG00000013910)	PHTF1 (ENSOGAG00000000695)	MAGI3 (ENSOGAG00000000693)	LRIG2 (ENSOGAG00000003959) #10	SLC16A1 (ENSOGAG00000004969) #11	TAFA3 (ENSOGAG00000014095) #14	PPM1J (ENSOGAG00000014088) #15	RHOC (ENSOGAG00000027678) #16	MOV10 (ENSOGAG00000014080) #17	CAPZA1 (ENSOGAG00000014074) #18	ST7L (ENSOGAG00000014069) #19	WNT2B (ENSOGAG00000014065) #20	CTTNBP2NL (ENSOGAG00000033049) #21	KCND3 (ENSOGAG00000010504) #22	DDX20 (ENSOGAG00000010503) #23	INKA2 (ENSOGAG00000010502) #24	RAP1A (ENSOGAG00000030644) #25	ENSOGAG00000027410	ENSOGAG00000030415	TMIGD3 (ENSOGAG00000033613) #26	C1orf162 (ENSOGAG00000008150) #27	ENSOGAG00000011486 #28	WDR77 (ENSOGAG00000030741) #29
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00940000163351 #34	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36	ENSGT01030000234578.B.b #37
Glires	ANCESTRAL SPECIES		ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36	ENSGT01030000234578.B.b #37	ENSGT00390000017353
Lagomorpha	ANCESTRAL SPECIES	1	ENSGT00390000018096	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT00930000151073 #26	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00940000163351 #34	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36	ENSGT01030000234578.B.b #37	ENSGT00390000017353
Rabbit	MODERN SPECIES	4	PHTF1 (ENSOCUG00000003752)	MAGI3 (ENSOCUG00000017382)	ENSOCUG00000024668	LRIG2 (ENSOCUG00000010256) #10	ENSOCUG00000035073	SLC16A1 (ENSOCUG00000016776) #11	TAFA3 (ENSOCUG00000000280) #14	PPM1J (ENSOCUG00000006310) #15	ENSOCUG00000027213 #16	MOV10 (ENSOCUG00000000276) #17	CAPZA1 (ENSOCUG00000000270) #18	ENSOCUG00000000269 #19	WNT2B (ENSOCUG00000000266) #20	CTTNBP2NL (ENSOCUG00000023315) #21	ENSOCUG00000023372	KCND3 (ENSOCUG00000014279) #22	DDX20 (ENSOCUG00000025939) #23	INKA2 (ENSOCUG00000017680) #24	RAP1A (ENSOCUG00000030320) #25	ENSOCUG00000024498	ENSOCUG00000007822 #26	ADORA3 (ENSOCUG00000023239)	C1orf162 (ENSOCUG00000007816) #27	ENSOCUG00000007809 #28	WDR77 (ENSOCUG00000007801) #29	OVGP1 (ENSOCUG00000015946) #30	PIFO (ENSOCUG00000028213) #31	CHI3L2 (ENSOCUG00000015772) #34	DENND2D (ENSOCUG00000015755) #35	CEPT1 (ENSOCUG00000015742) #36	DRAM2 (ENSOCUG00000015731) #37
Pika	MODERN SPECIES	459																ENSOPRG00000004068 #22	DDX20 (ENSOPRG00000004035) #23	INKA2 (ENSOPRG00000004027) #24	RAP1A (ENSOPRG00000003999) #25
Rodentia	ANCESTRAL SPECIES		ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.g #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36	ENSGT01030000234578.B.b #37	ENSGT00390000017353
Rodentia_A	ANCESTRAL SPECIES		ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.g #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36	ENSGT01030000234578.B.b #37	ENSGT00390000017353
Hystricomorpha	ANCESTRAL SPECIES	23	ENSGT00390000018096	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.g #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36	ENSGT01030000234578.B.b #37	ENSGT00390000017353	ENSGT00940000159669
Naked mole-rat female	MODERN SPECIES	10	LRIG2 (ENSHGLG00000016354) #10	ENSHGLG00000016346 #11	ENSHGLG00000034195 #11	TAFA3 (ENSHGLG00000018506) #14	PPM1J (ENSHGLG00000009548) #15	RHOC (ENSHGLG00000032070) #16	MOV10 (ENSHGLG00000004970) #17	ENSHGLG00000045694 #18	ST7L (ENSHGLG00000018040) #19	WNT2B (ENSHGLG00000014959) #20	ENSHGLG00000003197	ENSHGLG00000016608 #21	ENSHGLG00000042226	ENSHGLG00000017681	ENSHGLG00000038826	ENSHGLG00000017438 #22	DDX20 (ENSHGLG00000014848) #23	FAM212B (ENSHGLG00000032533) #24	RAP1A (ENSHGLG00000008139) #25	ADORA3 (ENSHGLG00000006832)	ENSHGLG00000004637 #26	ENSHGLG00000041308	ENSHGLG00000004364 #28	WDR77 (ENSHGLG00000008077) #29	ENSHGLG00000036915 #30	PIFO (ENSHGLG00000048487) #31	DENND2D (ENSHGLG00000007550) #35	CEPT1 (ENSHGLG00000004650) #36	DRAM2 (ENSHGLG00000007043) #37	ENSHGLG00000036901	CD53 (ENSHGLG00000007172)
Hystricomorpha_a	ANCESTRAL SPECIES	14	ENSGT00390000018096	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.g #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36	ENSGT01030000234578.B.b #37	ENSGT00390000017353	ENSGT00940000159669
Guinea pig	MODERN SPECIES	2	AP4B1 (ENSCPOG00000001286)	ENSCPOG00000037879	RSBN1 (ENSCPOG00000006990)	PHTF1 (ENSCPOG00000006981)	MAGI3 (ENSCPOG00000006971)	LRIG2 (ENSCPOG00000006833) #10	SLC16A1 (ENSCPOG00000022989) #11	TAFA3 (ENSCPOG00000036826) #14	PPM1J (ENSCPOG00000004145) #15	RHOC (ENSCPOG00000014541) #16	MOV10 (ENSCPOG00000014537) #17	CAPZA1 (ENSCPOG00000014532) #18	ST7L (ENSCPOG00000014528) #19	WNT2B (ENSCPOG00000000194) #20	CTTNBP2NL (ENSCPOG00000040118) #21	KCND3 (ENSCPOG00000001820) #22	DDX20 (ENSCPOG00000032340) #23	INKA2 (ENSCPOG00000001816) #24	RAP1A (ENSCPOG00000032437) #25	ADORA3 (ENSCPOG00000032151)	C1orf162 (ENSCPOG00000025561) #27	ATP5PB (ENSCPOG00000014070) #28	WDR77 (ENSCPOG00000025009) #29	OVGP1 (ENSCPOG00000000902) #30	PIFO (ENSCPOG00000033762) #31	DENND2D (ENSCPOG00000003677) #35	CEPT1 (ENSCPOG00000011067) #36	DRAM2 (ENSCPOG00000003496) #37	ENSCPOG00000039442	CD53 (ENSCPOG00000010280)	ENSCPOG00000023753
Hystricomorpha_b	ANCESTRAL SPECIES	6	ENSGT00390000018096	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.g #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36	ENSGT01030000234578.B.b #37	ENSGT00390000017353	ENSGT00940000159669
Long-tailed chinchilla	MODERN SPECIES	142	BCL2L15 (ENSCLAG00000013554)	ENSCLAG00000009628	RSBN1 (ENSCLAG00000008858)	PHTF1 (ENSCLAG00000010050)	MAGI3 (ENSCLAG00000005341)	LRIG2 (ENSCLAG00000004883) #10	SLC16A1 (ENSCLAG00000006864) #11	TAFA3 (ENSCLAG00000005391) #14	PPM1J (ENSCLAG00000005118) #15	RHOC (ENSCLAG00000004444) #16	MOV10 (ENSCLAG00000008493) #17	CAPZA1 (ENSCLAG00000007602) #18	ST7L (ENSCLAG00000007732) #19	WNT2B (ENSCLAG00000005379) #20	CTTNBP2NL (ENSCLAG00000006818) #21	KCND3 (ENSCLAG00000005748) #22	DDX20 (ENSCLAG00000008874) #23	INKA2 (ENSCLAG00000007395) #24	RAP1A (ENSCLAG00000006589) #25	ADORA3 (ENSCLAG00000006054)	ENSCLAG00000009052 #26	C1orf162 (ENSCLAG00000009693) #27	ATP5PB (ENSCLAG00000006182) #28	WDR77 (ENSCLAG00000005791) #29	OVGP1 (ENSCLAG00000005245) #30	PIFO (ENSCLAG00000007375) #31	DENND2D (ENSCLAG00000005887) #35	CEPT1 (ENSCLAG00000006226) #36	DRAM2 (ENSCLAG00000007313) #37	LRIF1 (ENSCLAG00000006529)	CD53 (ENSCLAG00000008592)
Degu	MODERN SPECIES	181	ENSODEG00000008326 #36	PHTF1 (ENSODEG00000007432)	MAGI3 (ENSODEG00000007160)	ENSODEG00000019722	ENSODEG00000009254	LRIG2 (ENSODEG00000012585) #10	SLC16A1 (ENSODEG00000007835) #11	TAFA3 (ENSODEG00000009074) #14	PPM1J (ENSODEG00000007627) #15	ENSODEG00000008244 #16	MOV10 (ENSODEG00000010401) #17	ENSODEG00000007252 #18	ST7L (ENSODEG00000007468) #19	WNT2B (ENSODEG00000008783) #20	CTTNBP2NL (ENSODEG00000008068) #21	KCND3 (ENSODEG00000008613) #22	ENSODEG00000007653 #23	INKA2 (ENSODEG00000009526) #24	ENSODEG00000008652 #25	ENSODEG00000007477	ADORA3 (ENSODEG00000007861)	ENSODEG00000008789 #26	ENSODEG00000009577 #28	WDR77 (ENSODEG00000008128) #29	OVGP1 (ENSODEG00000010601) #30	PIFO (ENSODEG00000007650) #31	ENSODEG00000019481	DENND2D (ENSODEG00000008171) #35	ENSODEG00000008262 #36	DRAM2 (ENSODEG00000009902) #37
Sciuridae	ANCESTRAL SPECIES		ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.f.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.n #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36	ENSGT01030000234578.B.b #37	ENSGT00390000017353
Marmotini	ANCESTRAL SPECIES	62	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000155644.d #14	ENSGT00940000154955.e.b ##11	ENSGT00940000155644.c.b #14	ENSGT00940000155644.c.a #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a.q #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.g #18	ENSGT00950000183119.a.e.a.d.f.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.n #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.ib.a #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017.e #31
Marmotini_b	ANCESTRAL SPECIES	74	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000155644.d #14	ENSGT00940000154955.e.b ##11	ENSGT00940000155644.c.a #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a.q #16	ENSGT00940000156024.g #17	ENSGT00950000183119.a.e.a.d.g #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251.n #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.ib.a #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017.e #31
Squirrel	MODERN SPECIES	290	BCL2L15 (ENSSTOG00000014693)	PTPN22 (ENSSTOG00000014683)	RSBN1 (ENSSTOG00000005592)	PHTF1 (ENSSTOG00000005566)	MAGI3 (ENSSTOG00000005528)	LRIG2 (ENSSTOG00000000595) #10	SLC16A1 (ENSSTOG00000006137) #11	TAFA3 (ENSSTOG00000032343) #14	PPM1J (ENSSTOG00000015975) #15	ENSSTOG00000022123 #16	ENSSTOG00000015963 #17	ENSSTOG00000015956 #18	WNT2B (ENSSTOG00000011442) #20	ST7L (ENSSTOG00000020270) #19	CTTNBP2NL (ENSSTOG00000011437) #21	KCND3 (ENSSTOG00000001773) #22	DDX20 (ENSSTOG00000029089) #23	INKA2 (ENSSTOG00000001760) #24	RAP1A (ENSSTOG00000027847) #25	ADORA3 (ENSSTOG00000025181)	ENSSTOG00000000483 #26	ENSSTOG00000028567 #27	ENSSTOG00000007630 #28	WDR77 (ENSSTOG00000025877) #29	OVGP1 (ENSSTOG00000023994) #30	PIFO (ENSSTOG00000031578) #31
Arctic ground squirrel	MODERN SPECIES	134	AP4B1 (ENSUPAG00010022296)	RSBN1 (ENSUPAG00010022293)	PHTF1 (ENSUPAG00010022262)	MAGI3 (ENSUPAG00010022248)	ENSUPAG00010022242	LRIG2 (ENSUPAG00010022233) #10	SLC16A1 (ENSUPAG00010022230) #11	ENSUPAG00010022155 ##11	TAFA3 (ENSUPAG00010022150) #14	PPM1J (ENSUPAG00010022145) #15	MOV10 (ENSUPAG00010022136) #17	CAPZA1 (ENSUPAG00010022133) #18	WNT2B (ENSUPAG00010022130) #20	ST7L (ENSUPAG00010022108) #19	CTTNBP2NL (ENSUPAG00010022096) #21	KCND3 (ENSUPAG00010022085) #22	DDX20 (ENSUPAG00010022080) #23	INKA2 (ENSUPAG00010022078) #24	RAP1A (ENSUPAG00010022075) #25	ADORA3 (ENSUPAG00010022072)	ENSUPAG00010022070 #26	C1orf162 (ENSUPAG00010022067) #27	ATP5PB (ENSUPAG00010022065) #28	WDR77 (ENSUPAG00010022061) #29	ENSUPAG00010022012 #30	ENSUPAG00010022009
Alpin marmot	MODERN SPECIES	79	PTPN22 (ENSMMMG00000013024)	RSBN1 (ENSMMMG00000013010)	PHTF1 (ENSMMMG00000012813)	MAGI3 (ENSMMMG00000012706)	LRIG2 (ENSMMMG00000012626) #10	SLC16A1 (ENSMMMG00000012618) #11	ENSMMMG00000012321 ##11	ENSMMMG00000012316 #14	ENSMMMG00000012304 #15	ENSMMMG00000012297 #16	MOV10 (ENSMMMG00000012241) #17	CAPZA1 (ENSMMMG00000012224) #18	ST7L (ENSMMMG00000012123) #19	WNT2B (ENSMMMG00000012112) #20	CTTNBP2NL (ENSMMMG00000012103) #21	KCND3 (ENSMMMG00000012044) #22	DDX20 (ENSMMMG00000012030) #23	INKA2 (ENSMMMG00000012022) #24	RAP1A (ENSMMMG00000012006) #25	ADORA3 (ENSMMMG00000011975)	ENSMMMG00000011967 #26	C1orf162 (ENSMMMG00000011956) #27	ENSMMMG00000011946 #28	WDR77 (ENSMMMG00000011929) #29	ENSMMMG00000011629 #30	ENSMMMG00000011617 #31	ENSMMMG00000011608 #31	ENSMMMG00000011580 #32
Eurasian red squirrel	MODERN SPECIES		RSBN1 (ENSSVLG00005020283)	PHTF1 (ENSSVLG00005020069)	MAGI3 (ENSSVLG00005019925)	ENSSVLG00005019855	LRIG2 (ENSSVLG00005019679) #10	SLC16A1 (ENSSVLG00005019541) #11	ENSSVLG00005019446 ##11	TAFA3 (ENSSVLG00005019351) #14	PPM1J (ENSSVLG00005019163) #15	RHOC (ENSSVLG00005019061) #16	MOV10 (ENSSVLG00005019002) #17	ENSSVLG00005018884 #18	ST7L (ENSSVLG00005018716) #19	WNT2B (ENSSVLG00005018609) #20	CTTNBP2NL (ENSSVLG00005018565) #21	KCND3 (ENSSVLG00005018411) #22	DDX20 (ENSSVLG00005018335) #23	INKA2 (ENSSVLG00005018314) #24	ENSSVLG00005018277 #25	TMIGD3 (ENSSVLG00005018210) #26	C1orf162 (ENSSVLG00005018121) #27	ENSSVLG00005017977 #28	WDR77 (ENSSVLG00005017918) #29	OVGP1 (ENSSVLG00005017787) #30	PIFO (ENSSVLG00005017626) #31	ENSSVLG00005017351 #32	DENND2D (ENSSVLG00005017048) #35	CEPT1 (ENSSVLG00005016962) #36	DRAM2 (ENSSVLG00005016915) #37	ENSSVLG00005016873	LRIF1 (ENSSVLG00005016841)
Rodentia_B	ANCESTRAL SPECIES		ENSGT00390000018096	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.g #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36	ENSGT01030000234578.B.b #37	ENSGT00390000017353
Kangaroo rat	MODERN SPECIES	397	ENSDORG00000026024	ENSDORG00000024961	ENSDORG00000025437	ENSDORG00000026684	Gbp5 (ENSDORG00000013912)	ENSDORG00000014806	ENSDORG00000002853 ##11	Tafa3 (ENSDORG00000000682) #14	Ppm1j (ENSDORG00000000680) #15	Rhoc (ENSDORG00000003382) #16	Mov10 (ENSDORG00000000673) #17	ENSDORG00000000671 #18	St7l (ENSDORG00000015552) #19	Wnt2b (ENSDORG00000025091) #20	Cttnbp2nl (ENSDORG00000027299) #21	Kcnd3 (ENSDORG00000011661) #22	Ddx20 (ENSDORG00000011660) #23	Inka2 (ENSDORG00000011659) #24	Rap1a (ENSDORG00000011656) #25	Adora3 (ENSDORG00000024247)	Tmigd3 (ENSDORG00000000135) #26	I830077J02Rik (ENSDORG00000000130) #27	ENSDORG00000013352 #28	Wdr77 (ENSDORG00000027503) #29	ENSDORG00000013347 #30	Pifo (ENSDORG00000002911) #31	ENSDORG00000003889 #32	Dennd2d (ENSDORG00000009333) #35	Cept1 (ENSDORG00000009332) #36	Dram2 (ENSDORG00000000526) #37
Myomorpha	ANCESTRAL SPECIES	12	ENSGT00390000018096	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.g.a.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00940000154557.c.a.d #32	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36	ENSGT01030000234578.B.b #37	ENSGT00390000017353
Muroidea	ANCESTRAL SPECIES	6	ENSGT00390000018096	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.g.a.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00940000154557.c.a.d #32	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36	ENSGT01030000234578.B.b #37	ENSGT00390000017353
Muroidea_A	ANCESTRAL SPECIES	5	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.g.a.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT01090000262147	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00940000154557.c.a.d.a.b #32	ENSGT00940000154557.c.a.c #32	ENSGT00940000154557.c.a.d.a.a #32	ENSGT00940000154557.c.a.d.b #32	ENSGT00950000182931.A #35
Cricetidae	ANCESTRAL SPECIES	6	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.g.a.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT01090000262147	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00940000154557.c.a.d.a.b #32	ENSGT00940000154557.c.a.c #32	ENSGT00940000154557.c.a.d.a.a #32	ENSGT00940000154557.c.a.d.b #32	ENSGT00950000182931.A #35
Cricetidae_B	ANCESTRAL SPECIES	3	ENSGT00390000018096	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.g.a.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00940000154557.c.a.d.a.b #32	ENSGT00940000154557.c.a.d.a.a #32	ENSGT00940000154557.c.a.d.b #32	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36
Northern American deer mouse	MODERN SPECIES	19	Bcl2l15 (ENSPEMG00000022471)	Ptpn22 (ENSPEMG00000026650)	Rsbn1 (ENSPEMG00000020974)	Phtf1 (ENSPEMG00000022049)	Magi3 (ENSPEMG00000021592)	Lrig2 (ENSPEMG00000023837) #10	Slc16a1 (ENSPEMG00000012987) #11	Tafa3 (ENSPEMG00000019797) #14	Ppm1j (ENSPEMG00000019596) #15	Rhoc (ENSPEMG00000019894) #16	Mov10 (ENSPEMG00000007910) #17	ENSPEMG00000011887 #18	St7l (ENSPEMG00000019718) #19	Wnt2b (ENSPEMG00000026096) #20	Cttnbp2nl (ENSPEMG00000025093) #21	Kcnd3 (ENSPEMG00000020087) #22	Ddx20 (ENSPEMG00000019595) #23	Inka2 (ENSPEMG00000025785) #24	Rap1a (ENSPEMG00000030241) #25	Adora3 (ENSPEMG00000019889)	Tmigd3 (ENSPEMG00000019932) #26	I830077J02Rik (ENSPEMG00000019698) #27	ENSPEMG00000020053 #28	Wdr77 (ENSPEMG00000019900) #29	ENSPEMG00000019924 #30	Pifo (ENSPEMG00000000041) #31	Chil5 (ENSPEMG00000019959) #32	ENSPEMG00000007488 #32	ENSPEMG00000012567 #32	Chil6 (ENSPEMG00000022931) #32	ENSPEMG00000027700
Prairie vole	MODERN SPECIES	143	ENSMOCG00000015941	Rsbn1 (ENSMOCG00000005658)	Phtf1 (ENSMOCG00000001641)	Magi3 (ENSMOCG00000012680)	ENSMOCG00000019954	Lrig2 (ENSMOCG00000001665) #10	Slc16a1 (ENSMOCG00000016724) #11	Tafa3 (ENSMOCG00000016194) #14	Ppm1j (ENSMOCG00000011058) #15	Rhoc (ENSMOCG00000013270) #16	Mov10 (ENSMOCG00000007110) #17	Capza1 (ENSMOCG00000007375) #18	St7l (ENSMOCG00000020030) #19	Wnt2b (ENSMOCG00000013588) #20	Cttnbp2nl (ENSMOCG00000014559) #21	Kcnd3 (ENSMOCG00000019614) #22	Ddx20 (ENSMOCG00000012954) #23	Inka2 (ENSMOCG00000012240) #24	Rap1a (ENSMOCG00000002767) #25	Adora3 (ENSMOCG00000009194)	I830077J02Rik (ENSMOCG00000001066) #27	ENSMOCG00000018208 #28	Wdr77 (ENSMOCG00000000531) #29	Ovgp1 (ENSMOCG00000007897) #30	Pifo (ENSMOCG00000007744) #31	Chil5 (ENSMOCG00000016005) #32	ENSMOCG00000016226	ENSMOCG00000000112	ENSMOCG00000013098 #32
Cricetinae	ANCESTRAL SPECIES	12	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.g.a.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT01090000262147	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00940000154557.c.a.d.a.b #32	ENSGT00940000154557.c.a.c #32	ENSGT00940000154557.c.a.d.a.a #32	ENSGT00940000154557.c.a.d.b #32	ENSGT00950000182931.A #35
Chinese hamster chok1gshd	MODERN SPECIES	66	Phtf1 (ENSCGRG00001000594)	Magi3 (ENSCGRG00001019918)	ENSCGRG00001012904	Lrig2 (ENSCGRG00001000172) #10	Slc16a1 (ENSCGRG00001016479) #11	Tafa3 (ENSCGRG00001000102) #14	Ppm1j (ENSCGRG00001010908) #15	Rhoc (ENSCGRG00001021156) #16	Mov10 (ENSCGRG00001010914) #17	Capza1 (ENSCGRG00001002836) #18	St7l (ENSCGRG00001014565) #19	Wnt2b (ENSCGRG00001012445) #20	ENSCGRG00001004537	Cttnbp2nl (ENSCGRG00001022371) #21	ENSCGRG00001001537	Kcnd3 (ENSCGRG00001015791) #22	Ddx20 (ENSCGRG00001014132) #23	Inka2 (ENSCGRG00001010315) #24	Rap1a (ENSCGRG00001016141) #25	Adora3 (ENSCGRG00001021966)	Tmigd3 (ENSCGRG00001018286) #26	I830077J02Rik (ENSCGRG00001009120) #27	Atp5pb (ENSCGRG00001013168) #28	Wdr77 (ENSCGRG00001002232) #29	Ovgp1 (ENSCGRG00001006238) #30	Pifo (ENSCGRG00001012700) #31	ENSCGRG00001023048 #32	Chia1 (ENSCGRG00001018747) #32	ENSCGRG00001000291 #32	Chil6 (ENSCGRG00001019821) #32	Dennd2d (ENSCGRG00001020875) #35
Golden Hamster	MODERN SPECIES	681	Rsbn1 (ENSMAUG00000014143)	Phtf1 (ENSMAUG00000007035)	Magi3 (ENSMAUG00000007363)	Lrig2 (ENSMAUG00000014920) #10	ENSMAUG00000017894	Slc16a1 (ENSMAUG00000014512) #11	Tafa3 (ENSMAUG00000019199) #14	Ppm1j (ENSMAUG00000001898) #15	Rhoc (ENSMAUG00000011420) #16	Mov10 (ENSMAUG00000013906) #17	Capza1 (ENSMAUG00000015757) #18	St7l (ENSMAUG00000016886) #19	Wnt2b (ENSMAUG00000005891) #20	Cttnbp2nl (ENSMAUG00000013248) #21	ENSMAUG00000014776	Kcnd3 (ENSMAUG00000019508) #22	Ddx20 (ENSMAUG00000010659) #23	Inka2 (ENSMAUG00000011511) #24	Rap1a (ENSMAUG00000013379) #25	Adora3 (ENSMAUG00000014394)	Tmigd3 (ENSMAUG00000010720) #26	I830077J02Rik (ENSMAUG00000012709) #27	ENSMAUG00000013010	Atp5pb (ENSMAUG00000014472) #28	Wdr77 (ENSMAUG00000011523) #29	Pifo (ENSMAUG00000012494) #31	ENSMAUG00000014307 #32	Chia1 (ENSMAUG00000000308) #32	ENSMAUG00000006898	ENSMAUG00000008993 #32	Chil6 (ENSMAUG00000019254) #32
Murinae	ANCESTRAL SPECIES	5	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.g.a.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT01090000262147	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00940000154557.c.a.d.a.b #32	ENSGT00940000154557.c.a.c #32	ENSGT00940000154557.c.a.d.a.a #32	ENSGT00940000154557.c.a.d.b #32	ENSGT00950000182931.A #35
Mus	ANCESTRAL SPECIES	7	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.g.a.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT01090000262147	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00940000154557.c.a.d.a.b #32	ENSGT00940000154557.c.a.c #32	ENSGT00940000154557.c.a.d.a.a #32	ENSGT00940000154557.c.a.d.b #32	ENSGT00950000182931.A #35
Mus_A	ANCESTRAL SPECIES	9	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.g.a.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT01090000262147	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00940000154557.c.a.d.a.b #32	ENSGT00940000154557.c.a.c #32	ENSGT00940000154557.c.a.d.a.a #32	ENSGT00940000154557.c.a.d.b #32	ENSGT00950000182931.A #35
Mus_B	ANCESTRAL SPECIES	8	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.g.a.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT01090000262147	ENSGT01090000262870	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00940000154557.c.a.d.a.b #32	ENSGT00940000154557.c.a.c #32	ENSGT00940000154557.c.a.d.a.a.c.a #32	ENSGT00940000154557.c.a.d.a.a.d #32	ENSGT00940000154557.c.a.d.b #32
Mus_C	ANCESTRAL SPECIES	6	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a.d.g.a.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT01090000262147	ENSGT01090000262870	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00940000154557.c.a.d.a.b #32	ENSGT00940000154557.c.a.c #32	ENSGT00940000154557.c.a.d.b #32	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36
Steppe mouse	MODERN SPECIES	2708																Kcnd3 (ENSMSIG00000005944) #22	Ddx20 (ENSMSIG00000005900) #23	Inka2 (ENSMSIG00000005873) #24	Rap1a (ENSMSIG00000005828) #25	Adora3 (ENSMSIG00000005809)	Tmigd3 (ENSMSIG00000005765) #26	I830077J02Rik (ENSMSIG00000005744) #27	ENSMSIG00000005701 #28	Wdr77 (ENSMSIG00000005672) #29	Ovgp1 (ENSMSIG00000005625) #30	Pifo (ENSMSIG00000005553) #31	Chil5 (ENSMSIG00000005504) #32	ENSMSIG00000005488	Chia1 (ENSMSIG00000005457) #32	Chil3 (ENSMSIG00000005424) #32	Chil4 (ENSMSIG00000005364) #32
spretus	MODERN SPECIES	12	Ptpn22 (MGP_SPRETEiJ_G0026407)	Rsbn1 (MGP_SPRETEiJ_G0026408)	Phtf1 (MGP_SPRETEiJ_G0026409)	Magi3 (MGP_SPRETEiJ_G0026410)	Lrig2 (MGP_SPRETEiJ_G0026411) #10	Slc16a1 (MGP_SPRETEiJ_G0026412) #11	Tafa3 (MGP_SPRETEiJ_G0026413) #14	Ppm1j (MGP_SPRETEiJ_G0026414) #15	Rhoc (MGP_SPRETEiJ_G0026415) #16	Mov10 (MGP_SPRETEiJ_G0026416) #17	Capza1 (MGP_SPRETEiJ_G0026417) #18	St7l (MGP_SPRETEiJ_G0026418) #19	Wnt2b (MGP_SPRETEiJ_G0026419) #20	Cttnbp2nl (MGP_SPRETEiJ_G0026420) #21	MGP_SPRETEiJ_G0026421	Kcnd3 (MGP_SPRETEiJ_G0026422) #22	Ddx20 (MGP_SPRETEiJ_G0026423) #23	Inka2 (MGP_SPRETEiJ_G0026424) #24	Rap1a (MGP_SPRETEiJ_G0026425) #25	MGP_SPRETEiJ_G0026426	Tmigd3 (MGP_SPRETEiJ_G0026427) #26	I830077J02Rik (MGP_SPRETEiJ_G0026428) #27	Atp5pb (MGP_SPRETEiJ_G0026429) #28	Wdr77 (MGP_SPRETEiJ_G0026430) #29	Ovgp1 (MGP_SPRETEiJ_G0026431) #30	Pifo (MGP_SPRETEiJ_G0026432) #31	Chil5 (MGP_SPRETEiJ_G0026433) #32	Chia1 (MGP_SPRETEiJ_G0026434) #32	Chil6 (MGP_SPRETEiJ_G0026436) #32	Dennd2d (MGP_SPRETEiJ_G0026437) #35	Cept1 (MGP_SPRETEiJ_G0026438) #36
Mouse	MODERN SPECIES	12	Bcl2l15 (ENSMUSG00000044165)	Ptpn22 (ENSMUSG00000027843)	Rsbn1 (ENSMUSG00000044098)	Phtf1 (ENSMUSG00000058388)	Magi3 (ENSMUSG00000052539)	Lrig2 (ENSMUSG00000032913) #10	Slc16a1 (ENSMUSG00000032902) #11	Tafa3 (ENSMUSG00000055865) #14	Ppm1j (ENSMUSG00000002228) #15	Rhoc (ENSMUSG00000002233) #16	Mov10 (ENSMUSG00000002227) #17	Capza1 (ENSMUSG00000070372) #18	St7l (ENSMUSG00000045576) #19	Wnt2b (ENSMUSG00000027840) #20	Cttnbp2nl (ENSMUSG00000062127) #21	Kcnd3 (ENSMUSG00000040896) #22	Ddx20 (ENSMUSG00000027905) #23	Inka2 (ENSMUSG00000048458) #24	Rap1a (ENSMUSG00000068798) #25	Adora3 (ENSMUSG00000000562)	Tmigd3 (ENSMUSG00000074344) #26	I830077J02Rik (ENSMUSG00000074342) #27	Atp5pb (ENSMUSG00000000563) #28	Wdr77 (ENSMUSG00000000561) #29	Ovgp1 (ENSMUSG00000074340) #30	Pifo (ENSMUSG00000010136) #31	Chil5 (ENSMUSG00000043873) #32	Chia1 (ENSMUSG00000062778) #32	Chil3 (ENSMUSG00000040809) #32	Chil4 (ENSMUSG00000063779) #32	Chil6 (ENSMUSG00000027902) #32
Ryukyu mouse	MODERN SPECIES	12	Ptpn22 (MGP_CAROLIEiJ_G0025458)	Rsbn1 (MGP_CAROLIEiJ_G0025459)	Phtf1 (MGP_CAROLIEiJ_G0025460)	Magi3 (MGP_CAROLIEiJ_G0025461)	Lrig2 (MGP_CAROLIEiJ_G0025462) #10	Slc16a1 (MGP_CAROLIEiJ_G0025463) #11	Tafa3 (MGP_CAROLIEiJ_G0025464) #14	Ppm1j (MGP_CAROLIEiJ_G0025465) #15	Rhoc (MGP_CAROLIEiJ_G0025466) #16	Mov10 (MGP_CAROLIEiJ_G0025467) #17	Capza1 (MGP_CAROLIEiJ_G0025468) #18	St7l (MGP_CAROLIEiJ_G0025469) #19	Wnt2b (MGP_CAROLIEiJ_G0025470) #20	Cttnbp2nl (MGP_CAROLIEiJ_G0025471) #21	MGP_CAROLIEiJ_G0025472	Kcnd3 (MGP_CAROLIEiJ_G0025473) #22	Ddx20 (MGP_CAROLIEiJ_G0025474) #23	Inka2 (MGP_CAROLIEiJ_G0025475) #24	Rap1a (MGP_CAROLIEiJ_G0025476) #25	Adora3 (MGP_CAROLIEiJ_G0025477)	Tmigd3 (MGP_CAROLIEiJ_G0025478) #26	I830077J02Rik (MGP_CAROLIEiJ_G0025479) #27	Atp5pb (MGP_CAROLIEiJ_G0025480) #28	Wdr77 (MGP_CAROLIEiJ_G0025481) #29	Ovgp1 (MGP_CAROLIEiJ_G0025482) #30	Pifo (MGP_CAROLIEiJ_G0025483) #31	Chil5 (MGP_CAROLIEiJ_G0025484) #32	Chia1 (MGP_CAROLIEiJ_G0025485) #32	Chil6 (MGP_CAROLIEiJ_G0025486) #32	Dennd2d (MGP_CAROLIEiJ_G0025487) #35	Cept1 (MGP_CAROLIEiJ_G0025488) #36
Shrew mouse	MODERN SPECIES	17	MGP_PahariEiJ_G0026903	Rsbn1 (MGP_PahariEiJ_G0026904)	Phtf1 (MGP_PahariEiJ_G0026905)	Magi3 (MGP_PahariEiJ_G0026906)	Lrig2 (MGP_PahariEiJ_G0026907) #10	Slc16a1 (MGP_PahariEiJ_G0026908) #11	Tafa3 (MGP_PahariEiJ_G0026909) #14	Ppm1j (MGP_PahariEiJ_G0026910) #15	Rhoc (MGP_PahariEiJ_G0026911) #16	Mov10 (MGP_PahariEiJ_G0026912) #17	Capza1 (MGP_PahariEiJ_G0026913) #18	St7l (MGP_PahariEiJ_G0026914) #19	Wnt2b (MGP_PahariEiJ_G0026915) #20	Cttnbp2nl (MGP_PahariEiJ_G0026916) #21	MGP_PahariEiJ_G0026917	Kcnd3 (MGP_PahariEiJ_G0026918) #22	Ddx20 (MGP_PahariEiJ_G0026919) #23	Inka2 (MGP_PahariEiJ_G0026920) #24	Rap1a (MGP_PahariEiJ_G0026921) #25	Adora3 (MGP_PahariEiJ_G0026922)	Tmigd3 (MGP_PahariEiJ_G0026923) #26	I830077J02Rik (MGP_PahariEiJ_G0026924) #27	Atp5pb (MGP_PahariEiJ_G0026925) #28	Wdr77 (MGP_PahariEiJ_G0026926) #29	Ovgp1 (MGP_PahariEiJ_G0026927) #30	Pifo (MGP_PahariEiJ_G0026928) #31	Chil5 (MGP_PahariEiJ_G0026929) #32	Chia1 (MGP_PahariEiJ_G0026930) #32	Chil6 (MGP_PahariEiJ_G0026932) #32	Dennd2d (MGP_PahariEiJ_G0026933) #35	Cept1 (MGP_PahariEiJ_G0026934) #36
Rat	MODERN SPECIES	11	Magi3 (ENSRNOG00000019885)	AABR07012763.1 (ENSRNOG00000057707)	Rplp0l1 (ENSRNOG00000031358)	Lrig2 (ENSRNOG00000019957) #10	Slc16a1 (ENSRNOG00000019996) #11	Tafa3 (ENSRNOG00000030253) #14	Ppm1j (ENSRNOG00000012481) #15	Rhoc (ENSRNOG00000012630) #16	Mov10 (ENSRNOG00000012946) #17	Capza1 (ENSRNOG00000013538) #18	St7l (ENSRNOG00000014002) #19	Wnt2b (ENSRNOG00000014385) #20	Cttnbp2nl (ENSRNOG00000014479) #21	ENSRNOG00000068611	ENSRNOG00000066674	Kcnd3 (ENSRNOG00000014686) #22	Ddx20 (ENSRNOG00000015274) #23	Inka2 (ENSRNOG00000015691) #24	Rap1a (ENSRNOG00000032463) #25	Tmigd3 (ENSRNOG00000043375) #26	Adora3 (ENSRNOG00000015788)	C2h1orf162 (ENSRNOG00000070434) #27	Atp5pb (ENSRNOG00000064742) #28	Wdr77 (ENSRNOG00000016394) #29	Pifo (ENSRNOG00000016842) #31	AABR07012788.1 (ENSRNOG00000051068) #32	Prdx1l1 (ENSRNOG00000017695)	Chia (ENSRNOG00000033162) #32	ENSRNOG00000067768 #32	Chi3l3 (ENSRNOG00000037115) #32	RGD1309110 (ENSRNOG00000017574) #32
Upper Galilee mountains blind mole rat	MODERN SPECIES	868	ENSNGAG00000017059	Rsbn1 (ENSNGAG00000019425)	Phtf1 (ENSNGAG00000015016)	ENSNGAG00000016204	Magi3 (ENSNGAG00000011689)	Lrig2 (ENSNGAG00000010221) #10	Slc16a1 (ENSNGAG00000014061) #11	Tafa3 (ENSNGAG00000018382) #14	Ppm1j (ENSNGAG00000021142) #15	ENSNGAG00000013328 #16	Mov10 (ENSNGAG00000021868) #17	ENSNGAG00000022738 #18	St7l (ENSNGAG00000024221) #19	Wnt2b (ENSNGAG00000016171) #20	Cttnbp2nl (ENSNGAG00000021422) #21	Kcnd3 (ENSNGAG00000011906) #22	Ddx20 (ENSNGAG00000022953) #23	Inka2 (ENSNGAG00000015197) #24	Rap1a (ENSNGAG00000022775) #25	Adora3 (ENSNGAG00000001830)	Tmigd3 (ENSNGAG00000021259) #26	I830077J02Rik (ENSNGAG00000018819) #27	ENSNGAG00000023617 #28	ENSNGAG00000003051 #29	Ovgp1 (ENSNGAG00000023031) #30
Lesser Egyptian jerboa	MODERN SPECIES	69								Lrig2 (ENSJJAG00000015856) #10	ENSJJAG00000023936 #11	Tafa3 (ENSJJAG00000001192) #14	Ppm1j (ENSJJAG00000014989) #15	Rhoc (ENSJJAG00000004154) #16	Mov10 (ENSJJAG00000016562) #17	ENSJJAG00000017577 #18	St7l (ENSJJAG00000019603) #19	Kcnd3 (ENSJJAG00000023895) #22	Ddx20 (ENSJJAG00000011198) #23	Rap1a (ENSJJAG00000013293) #25	Adora3 (ENSJJAG00000018221)	Tmigd3 (ENSJJAG00000011089) #26	I830077J02Rik (ENSJJAG00000018125) #27	ENSJJAG00000021163 #28	Wdr77 (ENSJJAG00000012937) #29	Ovgp1 (ENSJJAG00000019837) #30	Pifo (ENSJJAG00000002457) #31	ENSJJAG00000000819 #32	Dennd2d (ENSJJAG00000014786) #35	Cept1 (ENSJJAG00000022688) #36	Dram2 (ENSJJAG00000013859) #37	Lrif1 (ENSJJAG00000015203)	Cd53 (ENSJJAG00000023451)
Laurasiatheria	ANCESTRAL SPECIES		ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000169090	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00940000163644	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00940000165936	ENSGT00940000163351 #34
Eulipotyphla	ANCESTRAL SPECIES	938																ENSGT00940000155343 #22	ENSGT00940000158400 #23
Common shrew	MODERN SPECIES	3579																KCND3 (ENSSARG00000013606) #22	DDX20 (ENSSARG00000013569) #23
Hedgehog	DUPLICATION
Hedgehog	MODERN SPECIES	4856																KCND3 (ENSEEUG00000000483) #22	ENSEEUG00000000480 #23
Hedgehog	MODERN SPECIES	7625																ENSEEUG00000011804 #22
Laurasiatheria_a	ANCESTRAL SPECIES		ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000169090	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00940000163644	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00940000165936	ENSGT00940000163351 #34
Artiodactyla	ANCESTRAL SPECIES		ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.n.a #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00940000163644	ENSGT00940000162989.c	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00940000165936	ENSGT00940000163351 #34
Suina	ANCESTRAL SPECIES	32	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.n.a #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00940000163644	ENSGT00390000001017.i #31	ENSGT00940000162989.c	ENSGT00390000001017.j #31	ENSGT00940000154557.c.a #32	ENSGT00940000163351 #34	ENSGT00950000182931.A #35
Pig	MODERN SPECIES	12	PHTF1 (ENSSSCG00000006766)	MAGI3 (ENSSSCG00000006767)	LRIG2 (ENSSSCG00000034581) #10	ENSSSCG00000063479 ##11	ENSSSCG00000006770	ENSSSCG00000006771 ##11	ENSSSCG00000060579	TAFA3 (ENSSSCG00000054939) #14	PPM1J (ENSSSCG00000006774) #15	RHOC (ENSSSCG00000006777) #16	MOV10 (ENSSSCG00000006776) #17	CAPZA1 (ENSSSCG00000006775) #18	ST7L (ENSSSCG00000006779) #19	WNT2B (ENSSSCG00000006780) #20	CTTNBP2NL (ENSSSCG00000006781) #21	KCND3 (ENSSSCG00000026680) #22	DDX20 (ENSSSCG00000006783) #23	INKA2 (ENSSSCG00000036030) #24	RAP1A (ENSSSCG00000006785) #25	ENSSSCG00000033957	ADORA3 (ENSSSCG00000006788) #26	ENSSSCG00000025485 #27	ATP5PB (ENSSSCG00000037772) #28	WDR77 (ENSSSCG00000006790) #29	OVGP1 (ENSSSCG00000006791) #30	PGB (ENSSSCG00000006792)	ENSSSCG00000057886 #31	ENSSSCG00000039977 #31	CHIA (ENSSSCG00000023706) #32	CHI3L2 (ENSSSCG00000006796) #34	ENSSSCG00000051040
Chacoan peccary	MODERN SPECIES	215	PTPN22 (ENSCWAG00000003032)	RSBN1 (ENSCWAG00000003607)	PHTF1 (ENSCWAG00000003629)	MAGI3 (ENSCWAG00000003669)	LRIG2 (ENSCWAG00000003699) #10	ENSCWAG00000003720 ##11	ENSCWAG00000003745 ##11	TAFA3 (ENSCWAG00000003777) #14	PPM1J (ENSCWAG00000003807) #15	RHOC (ENSCWAG00000003888) #16	MOV10 (ENSCWAG00000003921) #17	ENSCWAG00000003990 #18	ST7L (ENSCWAG00000004057) #19	WNT2B (ENSCWAG00000004240) #20	CTTNBP2NL (ENSCWAG00000004286) #21	KCND3 (ENSCWAG00000004329) #22	DDX20 (ENSCWAG00000004423) #23	INKA2 (ENSCWAG00000004463) #24	RAP1A (ENSCWAG00000000076) #25	TMIGD3 (ENSCWAG00000000106) #26	ENSCWAG00000000148 #27	ENSCWAG00000000188 #28	WDR77 (ENSCWAG00000000242) #29	OVGP1 (ENSCWAG00000000271) #30	ENSCWAG00000000302	ENSCWAG00000000390 #31	ENSCWAG00000000477	ENSCWAG00000000866 #31	CHIA (ENSCWAG00000000901) #32	CHI3L2 (ENSCWAG00000000969) #34	DENND2D (ENSCWAG00000001068) #35
Artiodactyla_a	ANCESTRAL SPECIES		ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.n.a #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00940000163644	ENSGT00940000162989.c	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00940000165936	ENSGT00940000163351 #34
Artiodactyla_b	ANCESTRAL SPECIES		ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.n.a #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00940000163644	ENSGT00390000001017.k #31	ENSGT00940000162989.c	ENSGT00390000001017.l #31	ENSGT00940000154557.c.a #32	ENSGT00940000165936
Cetacea	ANCESTRAL SPECIES		ENSGT00390000018096	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.n.a.h #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017.k #31	ENSGT00940000162989.c	ENSGT00390000001017.l #31	ENSGT00940000154557.c.a #32	ENSGT00940000165936	ENSGT00940000163351 #34	ENSGT00950000182931.A #35
Odontoceti	ANCESTRAL SPECIES		ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.n.a.h #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017.k #31	ENSGT00940000162989.c	ENSGT00390000001017.l #31	ENSGT00940000154557.c.a #32	ENSGT00940000165936	ENSGT00940000163351 #34	ENSGT00950000182931.A #35
Odontoceti_a	ANCESTRAL SPECIES		ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.n.a.h #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017.k #31	ENSGT00940000162989.c	ENSGT00390000001017.l #31	ENSGT00940000154557.c.a #32	ENSGT00940000165936	ENSGT00940000163351 #34	ENSGT00950000182931.A #35
Dolphin	MODERN SPECIES	3579																KCND3 (ENSTTRG00000005139) #22	DDX20 (ENSTTRG00000005131) #23	INKA2 (ENSTTRG00000005110) #24	RAP1A (ENSTTRG00000005090) #25
Odontoceti_b	ANCESTRAL SPECIES		ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00960000186913.c	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.n.a.h #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017.k #31	ENSGT00940000162989.c	ENSGT00390000001017.l #31	ENSGT00940000154557.c.a #32	ENSGT00940000165936	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36
Vaquita	MODERN SPECIES		RSBN1 (ENSPSNG00000001187)	PHTF1 (ENSPSNG00000001106)	ENSPSNG00000001046	MAGI3 (ENSPSNG00000000989)	ENSPSNG00000000959	LRIG2 (ENSPSNG00000000869) #10	SLC16A1 (ENSPSNG00000000795) ##11	TAFA3 (ENSPSNG00000000757) #14	PPM1J (ENSPSNG00000000696) #15	RHOC (ENSPSNG00000000662) #16	MOV10 (ENSPSNG00000000620) #17	CAPZA1 (ENSPSNG00000000594) #18	ST7L (ENSPSNG00000000464) #19	WNT2B (ENSPSNG00000000322) #20	CTTNBP2NL (ENSPSNG00000000291) #21	KCND3 (ENSPSNG00000000230) #22	DDX20 (ENSPSNG00000000108) #23	INKA2 (ENSPSNG00000000085) #24	RAP1A (ENSPSNG00000000077) #25	TMIGD3 (ENSPSNG00000000054) #26	C1orf162 (ENSPSNG00000000039) #27	ENSPSNG00000018380 #28	WDR77 (ENSPSNG00000018333) #29	OVGP1 (ENSPSNG00000018211) #30	ENSPSNG00000018100 #31	ENSPSNG00000018040	ENSPSNG00000017976 #31	CHIA (ENSPSNG00000017767) #32	ENSPSNG00000017411	DENND2D (ENSPSNG00000016767) #35	CEPT1 (ENSPSNG00000016677) #36
Monodontidae	ANCESTRAL SPECIES		ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00960000186913.c	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.n.a.h #28	ENSGT00390000010711.g #29	ENSGT00390000001017.l #31	ENSGT00940000154557.c.a #32	ENSGT00940000165936	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36	ENSGT01030000234578.B.b #37	ENSGT00390000017353
Narwhal	MODERN SPECIES	304	MAGI3 (ENSMMNG00015016371)	ENSMMNG00015016435	ENSMMNG00015016455	LRIG2 (ENSMMNG00015016485) #10	ENSMMNG00015016557 ##11	ENSMMNG00015016573	ENSMMNG00015016605 ##11	TAFA3 (ENSMMNG00015016628) #14	PPM1J (ENSMMNG00015016659) #15	RHOC (ENSMMNG00015016738) #16	MOV10 (ENSMMNG00015016785) #17	CAPZA1 (ENSMMNG00015016891) #18	ST7L (ENSMMNG00015016977) #19	WNT2B (ENSMMNG00015017278) #20	CTTNBP2NL (ENSMMNG00015017327) #21	KCND3 (ENSMMNG00015017380) #22	DDX20 (ENSMMNG00015017446) #23	INKA2 (ENSMMNG00015017485) #24	RAP1A (ENSMMNG00015017506) #25	TMIGD3 (ENSMMNG00015017537) #26	C1orf162 (ENSMMNG00015017580) #27	ATP5PB (ENSMMNG00015017619) #28	WDR77 (ENSMMNG00015017655) #29	PIFO (ENSMMNG00015017677) #31	CHIA (ENSMMNG00015017712) #32	ENSMMNG00015017870	DENND2D (ENSMMNG00015018341) #35	CEPT1 (ENSMMNG00015018402) #36	DRAM2 (ENSMMNG00015018445) #37	LRIF1 (ENSMMNG00015018473)	ENSMMNG00015018491
Beluga whale	MODERN SPECIES	74	PHTF1 (ENSDLEG00000015505)	ENSDLEG00000015463	MAGI3 (ENSDLEG00000015437)	ENSDLEG00000015425	LRIG2 (ENSDLEG00000015322) #10	ENSDLEG00000015303	SLC16A1 (ENSDLEG00000015270) ##11	FAM19A3 (ENSDLEG00000015257) #14	PPM1J (ENSDLEG00000015240) #15	RHOC (ENSDLEG00000015225) #16	MOV10 (ENSDLEG00000015148) #17	CAPZA1 (ENSDLEG00000015133) #18	WNT2B (ENSDLEG00000015121) #20	CTTNBP2NL (ENSDLEG00000015110) #21	ST7L (ENSDLEG00000015036) #19	KCND3 (ENSDLEG00000015024) #22	DDX20 (ENSDLEG00000015010) #23	FAM212B (ENSDLEG00000015000) #24	RAP1A (ENSDLEG00000014980) #25	ADORA3 (ENSDLEG00000014971)	ENSDLEG00000014947 #28	ENSDLEG00000014938 #29	OVGP1 (ENSDLEG00000014907) #30	ENSDLEG00000014888 #29	ENSDLEG00000014857 #31	ENSDLEG00000014836 #31	CHIA (ENSDLEG00000014820) #32	ENSDLEG00000014689	DENND2D (ENSDLEG00000014651) #35	CEPT1 (ENSDLEG00000014634) #36	DRAM2 (ENSDLEG00000014572) #37
Sperm whale	MODERN SPECIES	15	RSBN1 (ENSPCTG00005001718)	PHTF1 (ENSPCTG00005001771)	MAGI3 (ENSPCTG00005001838)	LRIG2 (ENSPCTG00005001890) #10	SLC16A1 (ENSPCTG00005001963) ##11	ENSPCTG00005001991	ENSPCTG00005002004	TAFA3 (ENSPCTG00005002012) #14	PPM1J (ENSPCTG00005002033) #15	RHOC (ENSPCTG00005002061) #16	MOV10 (ENSPCTG00005002086) #17	CAPZA1 (ENSPCTG00005002149) #18	ST7L (ENSPCTG00005002219) #19	WNT2B (ENSPCTG00005002451) #20	CTTNBP2NL (ENSPCTG00005002466) #21	KCND3 (ENSPCTG00005002492) #22	ENSPCTG00005002528	RAP1A (ENSPCTG00005002547) #25	ENSPCTG00005002576 #24	ENSPCTG00005002585 #26	C1orf162 (ENSPCTG00005002605) #27	ATP5PB (ENSPCTG00005002629) #28	WDR77 (ENSPCTG00005002656) #29	OVGP1 (ENSPCTG00005002695) #30	ENSPCTG00005002743 #31	ENSPCTG00005002752 #31	CHIA (ENSPCTG00005002774) #32	ENSPCTG00005002849	CHI3L2 (ENSPCTG00005003089) #34	DENND2D (ENSPCTG00005003121) #35	CEPT1 (ENSPCTG00005003166) #36
Blue whale	MODERN SPECIES		PHTF1 (ENSBMSG00010009188)	MAGI3 (ENSBMSG00010009134)	ENSBMSG00010009123	ENSBMSG00010009119	ENSBMSG00010009111	LRIG2 (ENSBMSG00010009101) #10	SLC16A1 (ENSBMSG00010009080) ##11	TAFA3 (ENSBMSG00010009066) #14	PPM1J (ENSBMSG00010009046) #15	RHOC (ENSBMSG00010009025) #16	MOV10 (ENSBMSG00010009012) #17	ENSBMSG00010009003 #18	ST7L (ENSBMSG00010008960) #19	WNT2B (ENSBMSG00010008924) #20	CTTNBP2NL (ENSBMSG00010008911) #21	KCND3 (ENSBMSG00010008877) #22	DDX20 (ENSBMSG00010008840) #23	INKA2 (ENSBMSG00010008828) #24	ENSBMSG00010008815	TMIGD3 (ENSBMSG00010008799) #26	C1orf162 (ENSBMSG00010008781) #27	ENSBMSG00010008767 #28	WDR77 (ENSBMSG00010008752) #29	OVGP1 (ENSBMSG00010008731) #30	ENSBMSG00010008706 #31	ENSBMSG00010008693	ENSBMSG00010008672	ENSBMSG00010008660 #31	CHIA (ENSBMSG00010008641) #32	ENSBMSG00010008572	DENND2D (ENSBMSG00010008496) #35
Pecora	ANCESTRAL SPECIES	2	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.n.a #28	ENSGT00390000010711 #29	ENSGT00940000162223.a #30	ENSGT00940000163644	ENSGT00390000001017.k #31	ENSGT00940000162223.b #30	ENSGT00940000162989.c	ENSGT00390000001017.l #31	ENSGT00940000154557.c.a #32
Yarkand deer	MODERN SPECIES	12	PHTF1 (ENSCHYG00000020034)	MAGI3 (ENSCHYG00000020532)	LRIG2 (ENSCHYG00000021183) #10	SLC16A1 (ENSCHYG00000021485) ##11	ENSCHYG00000021598	ENSCHYG00000021662 #14	PPM1J (ENSCHYG00000007120) #15	ENSCHYG00000007204 #16	MOV10 (ENSCHYG00000007244) #17	ENSCHYG00000007380	CAPZA1 (ENSCHYG00000007396) #18	ST7L (ENSCHYG00000007457) #19	WNT2B (ENSCHYG00000007553) #20	CTTNBP2NL (ENSCHYG00000007594) #21	ENSCHYG00000007673	KCND3 (ENSCHYG00000007683) #22	DDX20 (ENSCHYG00000007715) #23	INKA2 (ENSCHYG00000007838) #24	RAP1A (ENSCHYG00000007851) #25	TMIGD3 (ENSCHYG00000007896) #26	C1orf162 (ENSCHYG00000007944) #27	ENSCHYG00000007985 #28	WDR77 (ENSCHYG00000008032) #29	ENSCHYG00000008093 #30	ENSCHYG00000008237	ENSCHYG00000008388 #31	ENSCHYG00000008426 #30	ENSCHYG00000008629	ENSCHYG00000010693 #31	CHIA (ENSCHYG00000010860) #32	ENSCHYG00000011001
Percora_a	ANCESTRAL SPECIES	1	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.n.a #28	ENSGT00390000010711 #29	ENSGT00940000162223.a #30	ENSGT00940000163644	ENSGT00390000001017.k #31	ENSGT00940000162223.b #30	ENSGT00940000162989.c	ENSGT00390000001017.l #31	ENSGT00940000154557.c.a #32
Bovidae	ANCESTRAL SPECIES	1	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.n.a #28	ENSGT00390000010711 #29	ENSGT00940000162223.a #30	ENSGT00940000163644	ENSGT00390000001017.k #31	ENSGT00940000162223.b #30	ENSGT00940000181698	ENSGT00940000162989.c	ENSGT00390000001017.l #31
Bovinae	ANCESTRAL SPECIES	1	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00390000006922.m.b.a.d	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00960000191271	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.n.a #28	ENSGT00390000010711 #29	ENSGT00940000162223.a #30	ENSGT00940000163644	ENSGT00390000001017.k #31	ENSGT00940000162223.b #30	ENSGT00940000181698	ENSGT00940000162989.c	ENSGT00390000001017.l #31	ENSGT00940000154557.d ##33
Bos	ANCESTRAL SPECIES		ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00390000006922.m.b.a.d	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00960000191271	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965.d #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.n.a #28	ENSGT00390000010711 #29	ENSGT00940000162223.a #30	ENSGT00940000163644	ENSGT00390000001017.k #31	ENSGT00940000162223.b #30	ENSGT00940000181698	ENSGT00940000162989.c	ENSGT00390000001017.l #31	ENSGT00940000154557.d ##33
Bos_b	ANCESTRAL SPECIES	1	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00390000006922.m.b.a.d	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00960000191271	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965.d #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.n.a #28	ENSGT00390000010711 #29	ENSGT00940000162223.a #30	ENSGT00940000163644	ENSGT00390000001017.k #31	ENSGT00940000162223.b #30	ENSGT00940000181698	ENSGT00940000162989.c	ENSGT00390000001017.l #31	ENSGT00960000190270
Cow	MODERN SPECIES	22	PHTF1 (ENSBTAG00000019615)	MAGI3 (ENSBTAG00000019611)	ENSBTAG00000027172	LRIG2 (ENSBTAG00000008525) #10	SLC16A1 (ENSBTAG00000015107) ##11	ENSBTAG00000055008	ENSBTAG00000049434 ##11	TAFA3 (ENSBTAG00000052841) #14	PPM1J (ENSBTAG00000006081) #15	RHOC (ENSBTAG00000014299) #16	MOV10 (ENSBTAG00000014297) #17	CAPZA1 (ENSBTAG00000014295) #18	ST7L (ENSBTAG00000014294) #19	WNT2B (ENSBTAG00000014291) #20	CTTNBP2NL (ENSBTAG00000021602) #21	KCND3 (ENSBTAG00000031654) #22	DDX20 (ENSBTAG00000018717) #23	INKA2 (ENSBTAG00000022580) #24	RAP1A (ENSBTAG00000050904) #25	TMIGD3 (ENSBTAG00000039738) #26	C3H1orf162 (ENSBTAG00000052822) #27	ATP5PB (ENSBTAG00000006441) #28	WDR77 (ENSBTAG00000014102) #29	OVGP1 (ENSBTAG00000005973) #30	ENSBTAG00000034841	ENSBTAG00000002489 #31	ENSBTAG00000024849 #30	ENSBTAG00000053654	ENSBTAG00000023535	ENSBTAG00000050402 #31	ENSBTAG00000048596
Hybrid Bos Indicus	MODERN SPECIES	22	MAGI3 (ENSBIXG00005006759)	ENSBIXG00005017729	LRIG2 (ENSBIXG00005017655) #10	SLC16A1 (ENSBIXG00005007332) ##11	ENSBIXG00005017390	TAFA3 (ENSBIXG00005017363) #14	PPM1J (ENSBIXG00005017328) #15	RHOC (ENSBIXG00005017234) #16	MOV10 (ENSBIXG00005006582) #17	CAPZA1 (ENSBIXG00005017096) #18	ST7L (ENSBIXG00005017004) #19	ENSBIXG00005016666	WNT2B (ENSBIXG00005016642) #20	CTTNBP2NL (ENSBIXG00005016617) #21	ENSBIXG00005016579	KCND3 (ENSBIXG00005016552) #22	DDX20 (ENSBIXG00005006446) #23	INKA2 (ENSBIXG00005016422) #24	ENSBIXG00005005506	RAP1A (ENSBIXG00005016406) #25	TMIGD3 (ENSBIXG00005016366) #26	C1orf162 (ENSBIXG00005016331) #27	ENSBIXG00005016292 #28	OVGP1 (ENSBIXG00005016174) #30	ENSBIXG00005016051 #31	ENSBIXG00005016026	ENSBIXG00005002542	ENSBIXG00005015938 #31	CHIA (ENSBIXG00005002493) #32	CHI3L2 (ENSBIXG00005002472) #34	ENSBIXG00005015738
Bos_a	ANCESTRAL SPECIES	32	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00390000006922.m.b.a.d	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00940000155644 #14	ENSGT00940000160965.d #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.n.a #28	ENSGT00390000010711 #29	ENSGT00940000162223.a #30	ENSGT00390000001017.k #31	ENSGT00940000162223.b #30	ENSGT00940000181698	ENSGT00940000162989.c	ENSGT00390000001017.l #31	ENSGT00940000154557.d ##33	ENSGT00960000190270
Wild yak	MODERN SPECIES	1807																KCND3 (ENSBMUG00000009410) #22	ENSBMUG00000009425	DDX20 (ENSBMUG00000009432) #23	INKA2 (ENSBMUG00000009452) #24	RAP1A (ENSBMUG00000009484) #25	TMIGD3 (ENSBMUG00000009513) #26	C1orf162 (ENSBMUG00000009522) #27	ATP5PB (ENSBMUG00000009537) #28	WDR77 (ENSBMUG00000009548) #29	ENSBMUG00000009563 #30	ENSBMUG00000009571 #31	ENSBMUG00000009587 #30	ENSBMUG00000009623
Domestic yak	MODERN SPECIES	22	PHTF1 (ENSBGRG00000004890)	MAGI3 (ENSBGRG00000004622)	ENSBGRG00000004572	LRIG2 (ENSBGRG00000004542) #10	SLC16A1 (ENSBGRG00000004446) ##11	TAFA3 (ENSBGRG00000004407) #14	ENSBGRG00000004388 #15	ENSBGRG00000004287 #15	RHOC (ENSBGRG00000005321) #16	MOV10 (ENSBGRG00000005173) #17	CAPZA1 (ENSBGRG00000005101) #18	ENSBGRG00000005079	WNT2B (ENSBGRG00000005038) #20	ST7L (ENSBGRG00000004608) #19	CTTNBP2NL (ENSBGRG00000004551) #21	KCND3 (ENSBGRG00000004468) #22	DDX20 (ENSBGRG00000004420) #23	INKA2 (ENSBGRG00000004403) #24	RAP1A (ENSBGRG00000004345) #25	TMIGD3 (ENSBGRG00000004138) #26	ENSBGRG00000004068 #27	ATP5PB (ENSBGRG00000003935) #28	WDR77 (ENSBGRG00000003894) #29	ENSBGRG00000003845 #31	OVGP1 (ENSBGRG00000003565) #30	ENSBGRG00000003517	ENSBGRG00000003449 #31	ENSBGRG00000003424 ##33	CHIA (ENSBGRG00000003406) #32	CHI3L2 (ENSBGRG00000003371) #34	DENND2D (ENSBGRG00000003306) #35
American bison	MODERN SPECIES	3366	PHTF1 (ENSBBBG00000010604)	MAGI3 (ENSBBBG00000010439)	ENSBBBG00000010355	LRIG2 (ENSBBBG00000001792) #10	ENSBBBG00000010320 ##11	ENSBBBG00000007392	ENSBBBG00000010297 ##11	TAFA3 (ENSBBBG00000000053) #14	PPM1J (ENSBBBG00000000080) #15	ENSBBBG00000000132 #16	MOV10 (ENSBBBG00000010240) #17	CAPZA1 (ENSBBBG00000001721) #18	ST7L (ENSBBBG00000010148) #19	WNT2B (ENSBBBG00000010055) #20	CTTNBP2NL (ENSBBBG00000010047) #21	KCND3 (ENSBBBG00000010024) #22	DDX20 (ENSBBBG00000001696) #23	INKA2 (ENSBBBG00000009986) #24	RAP1A (ENSBBBG00000009983) #25	TMIGD3 (ENSBBBG00000009970) #26	C1orf162 (ENSBBBG00000009963) #27	ENSBBBG00000009954 #28	WDR77 (ENSBBBG00000009940) #29	ENSBBBG00000009924 #30	ENSBBBG00000001651 #31	ENSBBBG00000009858 #30	ENSBBBG00000009825	ENSBBBG00000009818	ENSBBBG00000009796 #31	ENSBBBG00000009779	CHIA (ENSBBBG00000009767) #32
Caprinae	ANCESTRAL SPECIES	2	ENSGT00390000008767.a.a.a.b.f.k.b	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.n.a #28	ENSGT00390000010711 #29	ENSGT00940000162223.a.a #30	ENSGT00390000001017.k #31	ENSGT00940000162223.a.b #30	ENSGT00940000181698	ENSGT00940000162989.c	ENSGT00390000001017.l #31	ENSGT00940000154557.c.a #32
Rambouillet Sheep	MODERN SPECIES		ENSOARG00020019995	RSBN1 (ENSOARG00020016188)	PHTF1 (ENSOARG00020015861)	MAGI3 (ENSOARG00020015385)	ENSOARG00020015101 ##11	LRIG2 (ENSOARG00020014858) #10	SLC16A1 (ENSOARG00020014766) ##11	TAFA3 (ENSOARG00020014692) #14	PPM1J (ENSOARG00020014499) #15	RHOC (ENSOARG00020014447) #16	MOV10 (ENSOARG00020014075) #17	ENSOARG00020014006 #18	WNT2B (ENSOARG00020013948) #20	ST7L (ENSOARG00020013173) #19	CTTNBP2NL (ENSOARG00020013081) #21	KCND3 (ENSOARG00020012910) #22	DDX20 (ENSOARG00020012777) #23	INKA2 (ENSOARG00020012728) #24	RAP1A (ENSOARG00020012648) #25	C1orf162 (ENSOARG00020012347) #27	ENSOARG00020012190 #28	WDR77 (ENSOARG00020012024) #29	OVGP1 (ENSOARG00020011897) #30	ENSOARG00020011829 #31	ENSOARG00020011762 #31	ENSOARG00020011625 #30	ENSOARG00020011028	ENSOARG00020010749 #31	CHIA (ENSOARG00020010631) #32	CHI3L2 (ENSOARG00020010337) #34	DENND2D (ENSOARG00020009993) #35
Goat	MODERN SPECIES	22	PTPN22 (ENSCHIG00000014330)	RSBN1 (ENSCHIG00000015190)	PHTF1 (ENSCHIG00000016393)	MAGI3 (ENSCHIG00000013616)	LRIG2 (ENSCHIG00000021380) #10	ENSCHIG00000016601 ##11	ENSCHIG00000018209 ##11	PPM1J (ENSCHIG00000013435) #15	RHOC (ENSCHIG00000024084) #16	MOV10 (ENSCHIG00000022479) #17	CAPZA1 (ENSCHIG00000023138) #18	WNT2B (ENSCHIG00000009091) #20	ST7L (ENSCHIG00000025568) #19	ENSCHIG00000011859	CTTNBP2NL (ENSCHIG00000018320) #21	KCND3 (ENSCHIG00000019455) #22	DDX20 (ENSCHIG00000011219) #23	INKA2 (ENSCHIG00000025570) #24	RAP1A (ENSCHIG00000017703) #25	ADORA3 (ENSCHIG00000008671)	TMIGD3 (ENSCHIG00000010825) #26	C1orf162 (ENSCHIG00000025730) #27	ATP5PB (ENSCHIG00000012236) #28	WDR77 (ENSCHIG00000023007) #29	ENSCHIG00000018096	OVN (ENSCHIG00000016636) #30	ENSCHIG00000022367	ENSCHIG00000008928 #31	ENSCHIG00000020754 #30	ENSCHIG00000013140	ENSCHIG00000024796
Siberian musk deer	MODERN SPECIES	98	LRIG2 (ENSMMSG00000009918) #10	ENSMMSG00000009834 ##11	ENSMMSG00000009820	ENSMMSG00000009792	ENSMMSG00000009760 ##11	TAFA3 (ENSMMSG00000009742) #14	PPM1J (ENSMMSG00000009611) #15	RHOC (ENSMMSG00000009557) #16	MOV10 (ENSMMSG00000009432) #17	CAPZA1 (ENSMMSG00000009368) #18	ST7L (ENSMMSG00000009251) #19	WNT2B (ENSMMSG00000009189) #20	ENSMMSG00000009168	CTTNBP2NL (ENSMMSG00000009143) #21	ENSMMSG00000009132	KCND3 (ENSMMSG00000009020) #22	DDX20 (ENSMMSG00000008956) #23	INKA2 (ENSMMSG00000008934) #24	RAP1A (ENSMMSG00000008888) #25	ENSMMSG00000008856	TMIGD3 (ENSMMSG00000008818) #26	C1orf162 (ENSMMSG00000008788) #27	ENSMMSG00000008717 #28	WDR77 (ENSMMSG00000008635) #29	ENSMMSG00000008563 #30	ENSMMSG00000008505 #31	ENSMMSG00000008385 #30	ENSMMSG00000007971	ENSMMSG00000007840 #31	CHIA (ENSMMSG00000007723) #32	ENSMMSG00000007648
Camelidae	ANCESTRAL SPECIES	29	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.o #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36	ENSGT01030000234578.B.b #37	ENSGT00390000017353	ENSGT00940000159669
Arabian camel	MODERN SPECIES	35	RSBN1 (ENSCDRG00005005951)	PHTF1 (ENSCDRG00005006008)	MAGI3 (ENSCDRG00005006117)	LRIG2 (ENSCDRG00005000125) #10	ENSCDRG00005000217 ##11	ENSCDRG00005000249 ##11	TAFA3 (ENSCDRG00005000289) #14	PPM1J (ENSCDRG00005000330) #15	RHOC (ENSCDRG00005000382) #16	MOV10 (ENSCDRG00005000430) #17	CAPZA1 (ENSCDRG00005000502) #18	ST7L (ENSCDRG00005000571) #19	WNT2B (ENSCDRG00005000739) #20	ENSCDRG00005000751	CTTNBP2NL (ENSCDRG00005000760) #21	KCND3 (ENSCDRG00005000784) #22	DDX20 (ENSCDRG00005000809) #23	INKA2 (ENSCDRG00005000834) #24	RAP1A (ENSCDRG00005000845) #25	ENSCDRG00005000857	TMIGD3 (ENSCDRG00005000901) #26	C1orf162 (ENSCDRG00005000936) #27	ENSCDRG00005000969 #28	WDR77 (ENSCDRG00005001004) #29	ENSCDRG00005001051 #30	PIFO (ENSCDRG00005001125) #31	CHIA (ENSCDRG00005001168) #32	DENND2D (ENSCDRG00005001214) #35	ENSCDRG00005001260 #36	ENSCDRG00005001285 #37	LRIF1 (ENSCDRG00005001302)
Laurasiatheria_b	ANCESTRAL SPECIES		ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000169090	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00940000163644	ENSGT00390000001017 #31	ENSGT00940000154557.c.b #33	ENSGT00940000165936	ENSGT00940000154557.c.a #32
Carnivora	ANCESTRAL SPECIES	1	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000169090	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00940000163644.g.a	ENSGT00940000163644.g.b	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00950000182931.A #35
Caniformia	ANCESTRAL SPECIES	2	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00940000163644.g.a	ENSGT00940000163644.g.b	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36
Caniformia_b	ANCESTRAL SPECIES	1	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00940000163644.g.a	ENSGT00940000163644.g.b	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36
Ursidae	ANCESTRAL SPECIES	32	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.h #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00940000163644.g.a	ENSGT00940000163644.g.b	ENSGT00390000001017 #31	ENSGT00940000154557.d ##33	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36
Giant Panda	MODERN SPECIES	11	PTPN22 (ENSAMEG00000003307)	RSBN1 (ENSAMEG00000003339)	PHTF1 (ENSAMEG00000003343)	MAGI3 (ENSAMEG00000003390)	LRIG2 (ENSAMEG00000003413) #10	ENSAMEG00000003449 ##11	ENSAMEG00000028802 ##11	TAFA3 (ENSAMEG00000031120) #14	PPM1J (ENSAMEG00000003477) #15	RHOC (ENSAMEG00000003493) #16	MOV10 (ENSAMEG00000003505) #17	CAPZA1 (ENSAMEG00000003570) #18	WNT2B (ENSAMEG00000003598) #20	ST7L (ENSAMEG00000003590) #19	CTTNBP2NL (ENSAMEG00000003620) #21	KCND3 (ENSAMEG00000003632) #22	DDX20 (ENSAMEG00000005344) #23	INKA2 (ENSAMEG00000005378) #24	RAP1A (ENSAMEG00000005384) #25	TMIGD3 (ENSAMEG00000005422) #26	C1orf162 (ENSAMEG00000005430) #27	ATP5PB (ENSAMEG00000026613) #28	WDR77 (ENSAMEG00000005454) #29	PGB2 (ENSAMEG00000005567)	ENSAMEG00000029447	PIFO (ENSAMEG00000005665) #31	DENND2D (ENSAMEG00000005697) #35	CEPT1 (ENSAMEG00000005727) #36	DRAM2 (ENSAMEG00000005732) #37	LRIF1 (ENSAMEG00000010491)	CD53 (ENSAMEG00000010436)
Ursus	ANCESTRAL SPECIES	70							ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.h #28	ENSGT00390000010711 #29	ENSGT00940000162223.c #30	ENSGT00940000163644.g.a	ENSGT00940000163644.g.b	ENSGT00390000001017 #31	ENSGT00940000154557.d ##33	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36
Polar bear	MODERN SPECIES	255							ENSUMAG00000015670 ##11	TAFA3 (ENSUMAG00000015665) #14	PPM1J (ENSUMAG00000015659) #15	RHOC (ENSUMAG00000015654) #16	MOV10 (ENSUMAG00000014721) #17	CAPZA1 (ENSUMAG00000014563) #18	ST7L (ENSUMAG00000014015) #19	WNT2B (ENSUMAG00000013949) #20	CTTNBP2NL (ENSUMAG00000013946) #21	KCND3 (ENSUMAG00000013918) #22	DDX20 (ENSUMAG00000013897) #23	INKA2 (ENSUMAG00000013892) #24	RAP1A (ENSUMAG00000013890) #25	ADORA3 (ENSUMAG00000013887)	ENSUMAG00000013881 #26	C1orf162 (ENSUMAG00000013876) #27	ATP5PB (ENSUMAG00000013875) #28	WDR77 (ENSUMAG00000013868) #29	ENSUMAG00000013859	ENSUMAG00000013735 #30	ENSUMAG00000013716	ENSUMAG00000013714	PIFO (ENSUMAG00000013709) #31	ENSUMAG00000013706 ##33	DENND2D (ENSUMAG00000013701) #35
Mustelinae	ANCESTRAL SPECIES	47	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00940000163644.g.a	ENSGT00940000163644.g.b	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36
Ferret	MODERN SPECIES	312	PTPN22 (ENSMPUG00000005305)	RSBN1 (ENSMPUG00000005293)	PHTF1 (ENSMPUG00000005281)	MAGI3 (ENSMPUG00000005267)	LRIG2 (ENSMPUG00000005254) #10	ENSMPUG00000005249 ##11	ENSMPUG00000005243 ##11	TAFA3 (ENSMPUG00000005231) #14	PPM1J (ENSMPUG00000005170) #15	RHOC (ENSMPUG00000005141) #16	MOV10 (ENSMPUG00000004985) #17	CAPZA1 (ENSMPUG00000004977) #18	WNT2B (ENSMPUG00000004969) #20	ST7L (ENSMPUG00000004958) #19	CTTNBP2NL (ENSMPUG00000004952) #21	KCND3 (ENSMPUG00000004931) #22	DDX20 (ENSMPUG00000004921) #23	INKA2 (ENSMPUG00000004912) #24	RAP1A (ENSMPUG00000004842) #25	ADORA3 (ENSMPUG00000004839)	ENSMPUG00000004819 #26	ATP5PB (ENSMPUG00000004772) #28	WDR77 (ENSMPUG00000004756) #29	OVGP1 (ENSMPUG00000004475) #30	ENSMPUG00000004336	ENSMPUG00000004330 #31	CHIA (ENSMPUG00000004304) #32	DENND2D (ENSMPUG00000004249) #35	CEPT1 (ENSMPUG00000004240) #36	DRAM2 (ENSMPUG00000004232) #37	ENSMPUG00000004215
American mink	MODERN SPECIES	366								TAFA3 (ENSNVIG00000001972) #14	PPM1J (ENSNVIG00000001869) #15	RHOC (ENSNVIG00000001815) #16	MOV10 (ENSNVIG00000001682) #17	CAPZA1 (ENSNVIG00000001623) #18	ST7L (ENSNVIG00000001532) #19	WNT2B (ENSNVIG00000001502) #20	CTTNBP2NL (ENSNVIG00000001459) #21	KCND3 (ENSNVIG00000001280) #22	DDX20 (ENSNVIG00000001179) #23	INKA2 (ENSNVIG00000001144) #24	RAP1A (ENSNVIG00000001103) #25	ADORA3 (ENSNVIG00000001050)	ENSNVIG00000001026 #26	C1orf162 (ENSNVIG00000001003) #27	ATP5PB (ENSNVIG00000000953) #28	MEP50 (ENSNVIG00000000841) #29	ENSNVIG00000000706 #30	ENSNVIG00000000630	ENSNVIG00000000590	PIFO (ENSNVIG00000000505) #31	CHIA (ENSNVIG00000000368) #32	DENND2D (ENSNVIG00000000285) #35	CEPT1 (ENSNVIG00000000239) #36
Canidae	ANCESTRAL SPECIES	18	ENSGT00940000163248.k	ENSGT00940000164092	ENSGT00940000163248.l	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00940000154955.e.b.a ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00390000015005 #27	ENSGT00390000001958.e #28	ENSGT00390000010711.i #29	ENSGT00940000162223 #30	ENSGT00940000163644.g.a	ENSGT00390000001017.h #31	ENSGT00940000163644.g.b	ENSGT00390000001017.g #31	ENSGT00940000154557.c.a #32	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36
Canis_lupus	ANCESTRAL SPECIES	10	ENSGT00940000163248.k	ENSGT00940000164092	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00940000154955.e.b.a ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00390000009786.u.a.b.a	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00390000015005 #27	ENSGT00390000010711.i #29	ENSGT00940000162223 #30	ENSGT00940000163644.g.a.a	ENSGT00390000001017.h #31
Dingo	MODERN SPECIES	223	ENSCAFG00020009390	ENSCAFG00020009355	ENSCAFG00020009346	MAGI3 (ENSCAFG00020008708)	LRIG2 (ENSCAFG00020008658) #10	ENSCAFG00020008635 ##11	ENSCAFG00020008611 ##11	TAFA3 (ENSCAFG00020008583) #14	PPM1J (ENSCAFG00020008575) #15	RHOC (ENSCAFG00020008569) #16	MOV10 (ENSCAFG00020008556) #17	CAPZA1 (ENSCAFG00020008507) #18	WNT2B (ENSCAFG00020008500) #20	CTTNBP2NL (ENSCAFG00020008495) #21	ENSCAFG00020008492	KCND3 (ENSCAFG00020008441) #22	DDX20 (ENSCAFG00020008055) #23	INKA2 (ENSCAFG00020008030) #24	RAP1A (ENSCAFG00020008027) #25	ADORA3 (ENSCAFG00020007993)	ENSCAFG00020007983 #29	OVGP1 (ENSCAFG00020007980) #30	ENSCAFG00020007955 #31
Dog	MODERN SPECIES	8	PRR9 (ENSCAFG00845026679)	ENSCAFG00845005843	ENSCAFG00845005870	MAGI3 (ENSCAFG00845005973)	LRIG2 (ENSCAFG00845006193) #10	ENSCAFG00845006291 ##11	TAFA3 (ENSCAFG00845006369) #14	PPM1J (ENSCAFG00845006424) #15	RHOC (ENSCAFG00845006667) #16	MOV10 (ENSCAFG00845006911) #17	CAPZA1 (ENSCAFG00845006727) #18	ST7L (ENSCAFG00845007407) #19	WNT2B (ENSCAFG00845007687) #20	CTTNBP2NL (ENSCAFG00845007745) #21	ENSCAFG00845007793	KCND3 (ENSCAFG00845008017) #22	DDX20 (ENSCAFG00845008144) #23	INKA2 (ENSCAFG00845008216) #24	RAP1A (ENSCAFG00845008254) #25	ADORA3 (ENSCAFG00845008429)	ENSCAFG00845008469 #27	ENSCAFG00845008533 #30	ENSCAFG00845008615	ENSCAFG00845008673 #31	ENSCAFG00845008808
Red fox	MODERN SPECIES	180	ENSVVUG00000015758	ENSVVUG00000015763	ENSVVUG00000015768	MAGI3 (ENSVVUG00000015809)	LRIG2 (ENSVVUG00000015931) #10	ENSVVUG00000015991 ##11	ENSVVUG00000015995 ##11	TAFA3 (ENSVVUG00000016005) #14	PPM1J (ENSVVUG00000016017) #15	RHOC (ENSVVUG00000016051) #16	MOV10 (ENSVVUG00000016071) #17	CAPZA1 (ENSVVUG00000016105) #18	ST7L (ENSVVUG00000016179) #19	WNT2B (ENSVVUG00000016215) #20	CTTNBP2NL (ENSVVUG00000016219) #21	KCND3 (ENSVVUG00000016230) #22	DDX20 (ENSVVUG00000016236) #23	INKA2 (ENSVVUG00000016243) #24	RAP1A (ENSVVUG00000016250) #25	ADORA3 (ENSVVUG00000016258)	OVGP1 (ENSVVUG00000016278) #30	ENSVVUG00000016287 #31	ENSVVUG00000016305
Felidae	ANCESTRAL SPECIES	10	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00510000047760.k.a	ENSGT00940000155343 #22	ENSGT00940000169090	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.c #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00940000163644.g.a	ENSGT00940000163644.g.b	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00950000182931.A #35
Panthera	ANCESTRAL SPECIES	4	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00510000047760.k.a	ENSGT00940000155343 #22	ENSGT00940000169090	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.c #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00940000163644.g.a	ENSGT00940000163644.g.b	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00950000182931.A #35
Panthera_a	ANCESTRAL SPECIES	11	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00510000047760.k.a	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958.c #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00940000163644.g.a	ENSGT00940000163644.g.b	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36
leopard	MODERN SPECIES	31	RSBN1 (ENSPPRG00000008959)	PHTF1 (ENSPPRG00000013575)	MAGI3 (ENSPPRG00000023059)	LRIG2 (ENSPPRG00000000185) #10	ENSPPRG00000000446 ##11	ENSPPRG00000001627 ##11	TAFA3 (ENSPPRG00000002023) #14	PPM1J (ENSPPRG00000002873) #15	RHOC (ENSPPRG00000003991) #16	MOV10 (ENSPPRG00000007950) #17	CAPZA1 (ENSPPRG00000009375) #18	ST7L (ENSPPRG00000014650) #19	WNT2B (ENSPPRG00000016238) #20	CTTNBP2NL (ENSPPRG00000016873) #21	ENSPPRG00000018976	KCND3 (ENSPPRG00000023105) #22	DDX20 (ENSPPRG00000022979) #23	INKA2 (ENSPPRG00000000290) #24	RAP1A (ENSPPRG00000000474) #25	ADORA3 (ENSPPRG00000001196)	ENSPPRG00000001496 #26	ENSPPRG00000001921 #28	WDR77 (ENSPPRG00000002294) #29	OVGP1 (ENSPPRG00000002990) #30	ENSPPRG00000003335	ENSPPRG00000003526	PIFO (ENSPPRG00000004236) #31	CHIA (ENSPPRG00000005241) #32	DENND2D (ENSPPRG00000005693) #35	CEPT1 (ENSPPRG00000006226) #36	DRAM2 (ENSPPRG00000006598) #37
lion	MODERN SPECIES	8	RSBN1 (ENSPLOG00000019230)	PHTF1 (ENSPLOG00000019325)	MAGI3 (ENSPLOG00000019634)	LRIG2 (ENSPLOG00000019954) #10	ENSPLOG00000020002 ##11	ENSPLOG00000020035 ##11	TAFA3 (ENSPLOG00000020057) #14	PPM1J (ENSPLOG00000020096) #15	RHOC (ENSPLOG00000020186) #16	MOV10 (ENSPLOG00000020222) #17	ENSPLOG00000020394 #18	ST7L (ENSPLOG00000020474) #19	WNT2B (ENSPLOG00000020600) #20	CTTNBP2NL (ENSPLOG00000020641) #21	ENSPLOG00000020663	KCND3 (ENSPLOG00000020694) #22	DDX20 (ENSPLOG00000020749) #23	INKA2 (ENSPLOG00000004808) #24	RAP1A (ENSPLOG00000004823) #25	ADORA3 (ENSPLOG00000004840)	ENSPLOG00000004854 #27	ATP5PB (ENSPLOG00000004879) #28	WDR77 (ENSPLOG00000004899) #29	OVGP1 (ENSPLOG00000004911) #30	ENSPLOG00000004922	CHIA (ENSPLOG00000004941) #32	DENND2D (ENSPLOG00000005053) #35	CEPT1 (ENSPLOG00000005105) #36	DRAM2 (ENSPLOG00000005129) #37	LRIF1 (ENSPLOG00000005144)	CD53 (ENSPLOG00000005162)
Tiger	MODERN SPECIES	81	ENSPTIG00000011661	RSBN1 (ENSPTIG00000012973)	PHTF1 (ENSPTIG00000013775)	MAGI3 (ENSPTIG00000021471)	LRIG2 (ENSPTIG00000009001) #10	ENSPTIG00000009769 ##11	ENSPTIG00000010945 ##11	TAFA3 (ENSPTIG00000013385) #14	PPM1J (ENSPTIG00000013710) #15	RHOC (ENSPTIG00000014819) #16	MOV10 (ENSPTIG00000016249) #17	CAPZA1 (ENSPTIG00000003403) #18	ST7L (ENSPTIG00000005238) #19	WNT2B (ENSPTIG00000019917) #20	CTTNBP2NL (ENSPTIG00000021251) #21	KCND3 (ENSPTIG00000021413) #22	ENSPTIG00000021906	ENSPTIG00000021955 #23	INKA2 (ENSPTIG00000022035) #24	RAP1A (ENSPTIG00000022040) #25	ENSPTIG00000022060 #26	ADORA3 (ENSPTIG00000022080)	C1orf162 (ENSPTIG00000022095) #27	ATP5PB (ENSPTIG00000022106) #28	WDR77 (ENSPTIG00000003575) #29	OVGP1 (ENSPTIG00000005531) #30	ENSPTIG00000007525	PIFO (ENSPTIG00000008395) #31	ENSPTIG00000010240	CHIA (ENSPTIG00000010968) #32	DENND2D (ENSPTIG00000013499) #35
Cat	MODERN SPECIES	239	BCL2L15 (ENSFCAG00000009239)	PTPN22 (ENSFCAG00000009238)	RSBN1 (ENSFCAG00000027733)	PHTF1 (ENSFCAG00000028605)	MAGI3 (ENSFCAG00000009236)	LRIG2 (ENSFCAG00000026331) #10	SLC16A1 (ENSFCAG00000004315) ##11	TAFA3 (ENSFCAG00000013307) #14	PPM1J (ENSFCAG00000014429) #15	MOV10 (ENSFCAG00000013305) #17	CAPZA1 (ENSFCAG00000013303) #18	WNT2B (ENSFCAG00000036315) #20	CTTNBP2NL (ENSFCAG00000013300) #21	ST7L (ENSFCAG00000013302) #19	ENSFCAG00000030032	KCND3 (ENSFCAG00000002673) #22	DDX20 (ENSFCAG00000025736) #23	INKA2 (ENSFCAG00000040364) #24	RAP1A (ENSFCAG00000030756) #25	ADORA3 (ENSFCAG00000029569)	CC1H1orf162 (ENSFCAG00000044929) #27	ATP5PB (ENSFCAG00000028321) #28	WDR77 (ENSFCAG00000005651) #29	PGB1 (ENSFCAG00000046664)	PGB2 (ENSFCAG00000040956) #30	ENSFCAG00000039867 #31	CHIA (ENSFCAG00000028709) #32	DENND2D (ENSFCAG00000010113) #35	CEPT1 (ENSFCAG00000010111) #36	DRAM2 (ENSFCAG00000010109) #37	LRIF1 (ENSFCAG00000027452)
Laurasiatheria_c	ANCESTRAL SPECIES		ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00940000163644	ENSGT00390000001017 #31	ENSGT00940000154557.c.b #33	ENSGT00940000165936	ENSGT00940000163351 #34	ENSGT00950000182931.A #35
Equus	ANCESTRAL SPECIES	3	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00390000007084.d	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162989.c	ENSGT00390000001017 #31	ENSGT00940000163351 #34	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36	ENSGT01030000234578.B.b #37	ENSGT00390000017353
Horse	MODERN SPECIES	26	RSBN1 (ENSECAG00000008072)	PHTF1 (ENSECAG00000008416)	MAGI3 (ENSECAG00000012982)	ENSECAG00000037106	LRIG2 (ENSECAG00000018698) #10	SLC16A1 (ENSECAG00000021627) ##11	ENSECAG00000047726 ##11	TAFA3 (ENSECAG00000005328) #14	PPM1J (ENSECAG00000007948) #15	RHOC (ENSECAG00000044625) #16	MOV10 (ENSECAG00000011530) #17	CAPZA1 (ENSECAG00000016995) #18	ST7L (ENSECAG00000019081) #19	WNT2B (ENSECAG00000004705) #20	CTTNBP2NL (ENSECAG00000010817) #21	KCND3 (ENSECAG00000011594) #22	DDX20 (ENSECAG00000013565) #23	INKA2 (ENSECAG00000002928) #24	ENSECAG00000016434 #25	ADORA3 (ENSECAG00000033327)	ENSECAG00000046756 #26	ATP5PB (ENSECAG00000018599) #28	WDR77 (ENSECAG00000018629) #29	ENSECAG00000044272	PIFO (ENSECAG00000023736) #31	CHI3L2 (ENSECAG00000023849) #34	DENND2D (ENSECAG00000002508) #35	CEPT1 (ENSECAG00000009032) #36	DRAM2 (ENSECAG00000011242) #37	LRIF1 (ENSECAG00000013112)	CD53 (ENSECAG00000013534)
Donkey	MODERN SPECIES	7	RSBN1 (ENSEASG00005005523)	PHTF1 (ENSEASG00005005521)	MAGI3 (ENSEASG00005005514)	ENSEASG00005005507	LRIG2 (ENSEASG00005005502) #10	ENSEASG00005037410 ##11	ENSEASG00005034504 ##11	TAFA3 (ENSEASG00005005497) #14	PPM1J (ENSEASG00005005493) #15	RHOC (ENSEASG00005005492) #16	MOV10 (ENSEASG00005005486) #17	CAPZA1 (ENSEASG00005005479) #18	ST7L (ENSEASG00005005471) #19	WNT2B (ENSEASG00005005467) #20	CTTNBP2NL (ENSEASG00005005465) #21	KCND3 (ENSEASG00005005457) #22	DDX20 (ENSEASG00005005454) #23	INKA2 (ENSEASG00005029164) #24	RAP1A (ENSEASG00005005448) #25	TMIGD3 (ENSEASG00005005446) #26	C1orf162 (ENSEASG00005031971) #27	ATP5PB (ENSEASG00005005443) #28	WDR77 (ENSEASG00005005441) #29	ENSEASG00005005431	PIFO (ENSEASG00005005425) #31	CHI3L2 (ENSEASG00005005420) #34	DENND2D (ENSEASG00005005415) #35	CEPT1 (ENSEASG00005005407) #36	DRAM2 (ENSEASG00005005403) #37	LRIF1 (ENSEASG00005005401)	CD53 (ENSEASG00005005396)
Chiroptera	ANCESTRAL SPECIES	38	ENSGT00390000018096	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00940000163644	ENSGT00390000001017 #31	ENSGT00940000154557.c.b #33	ENSGT00940000165936	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36
Megabat	MODERN SPECIES	1722																KCND3 (ENSPVAG00000004666) #22	DDX20 (ENSPVAG00000004664) #23
Microchiroptera	ANCESTRAL SPECIES	35	ENSGT00390000018096	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.e.a ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00940000163644	ENSGT00390000001017 #31	ENSGT00940000154557.c.b #33	ENSGT00940000165936	ENSGT00950000182931.A #35	ENSGT00950000183117.a.b #36
Greater horseshoe bat	MODERN SPECIES	14	PTPN22 (ENSRFEG00010014261)	RSBN1 (ENSRFEG00010014156)	PHTF1 (ENSRFEG00010013922)	MAGI3 (ENSRFEG00010013783)	ENSRFEG00010013698	LRIG2 (ENSRFEG00010013581) #10	ENSRFEG00010013514 ##11	TAFA3 (ENSRFEG00010013461) #14	PPM1J (ENSRFEG00010013269) #15	RHOC (ENSRFEG00010013211) #16	MOV10 (ENSRFEG00010013132) #17	CAPZA1 (ENSRFEG00010013059) #18	WNT2B (ENSRFEG00010012963) #20	ST7L (ENSRFEG00010012674) #19	CTTNBP2NL (ENSRFEG00010012603) #21	KCND3 (ENSRFEG00010012538) #22	DDX20 (ENSRFEG00010012452) #23	INKA2 (ENSRFEG00010012415) #24	RAP1A (ENSRFEG00010012354) #25	TMIGD3 (ENSRFEG00010012229) #26	C1orf162 (ENSRFEG00010012182) #27	ENSRFEG00010012045 #28	WDR77 (ENSRFEG00010011876) #29	ENSRFEG00010011822	PIFO (ENSRFEG00010011650) #31	ENSRFEG00010011574 #33	ENSRFEG00010011181 #33	ENSRFEG00010011002	DENND2D (ENSRFEG00010010907) #35	CEPT1 (ENSRFEG00010010827) #36	DRAM2 (ENSRFEG00010010739) #37
Microbat	MODERN SPECIES	1038	BCL2L15 (ENSMLUG00000007445)	PTPN22 (ENSMLUG00000007430)	RSBN1 (ENSMLUG00000007416)	PHTF1 (ENSMLUG00000002367)	ENSMLUG00000002347	LRIG2 (ENSMLUG00000005456) #10	SLC16A1 (ENSMLUG00000005454) ##11	TAFA3 (ENSMLUG00000009867) #14	PPM1J (ENSMLUG00000009847) #15	RHOC (ENSMLUG00000025586) #16	MOV10 (ENSMLUG00000009815) #17	CAPZA1 (ENSMLUG00000009796) #18	ST7L (ENSMLUG00000009757) #19	WNT2B (ENSMLUG00000009754) #20	CTTNBP2NL (ENSMLUG00000009737) #21	KCND3 (ENSMLUG00000009699) #22	DDX20 (ENSMLUG00000009676) #23	INKA2 (ENSMLUG00000009665) #24	RAP1A (ENSMLUG00000010571) #25	ADORA3 (ENSMLUG00000027034)	ENSMLUG00000012427 #26	ENSMLUG00000012417 #28	WDR77 (ENSMLUG00000012412) #29	OVGP1 (ENSMLUG00000012407) #30	ENSMLUG00000012403	PIFO (ENSMLUG00000012396) #31	ENSMLUG00000010599 #33	ENSMLUG00000009000 #33	DENND2D (ENSMLUG00000005114) #35	CEPT1 (ENSMLUG00000005105) #36	ENSMLUG00000005097 #37
Atlantogenata	ANCESTRAL SPECIES	26	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00940000163644	ENSGT00940000162989.c	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00940000163351 #34	ENSGT00940000165936
Afrotheria	ANCESTRAL SPECIES	31	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00940000163644	ENSGT00940000162989.c	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00940000163351 #34	ENSGT00950000182931.A #35
Tenrec	MODERN SPECIES	6470																KCND3 (ENSETEG00000020183) #22
Afrotheria_a	ANCESTRAL SPECIES	31	ENSGT00940000160958	ENSGT00390000001969.a	ENSGT00390000011648.b	ENSGT00940000156496	ENSGT00940000158791 #10	ENSGT00940000154955.f #11	ENSGT00940000154955.e.b ##11	ENSGT00940000155644 #14	ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00390000000873.a.a #19	ENSGT00940000159166 #20	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29	ENSGT00940000162223 #30	ENSGT00940000163644	ENSGT00940000162989.c	ENSGT00390000001017 #31	ENSGT00940000154557.c.a #32	ENSGT00940000163351 #34	ENSGT00950000182931.A #35
Elephant	MODERN SPECIES	26	RSBN1 (ENSLAFG00000008049)	PHTF1 (ENSLAFG00000008042)	MAGI3 (ENSLAFG00000008032)	ENSLAFG00000029115	LRIG2 (ENSLAFG00000022642) #10	ENSLAFG00000027758 #11	SLC16A1 (ENSLAFG00000012938) ##11	TAFA3 (ENSLAFG00000011245) #14	PPM1J (ENSLAFG00000013073) #15	RHOC (ENSLAFG00000030194) #16	MOV10 (ENSLAFG00000000239) #17	CAPZA1 (ENSLAFG00000000238) #18	ST7L (ENSLAFG00000000234) #19	WNT2B (ENSLAFG00000022115) #20	CTTNBP2NL (ENSLAFG00000023083) #21	KCND3 (ENSLAFG00000014648) #22	DDX20 (ENSLAFG00000014646) #23	INKA2 (ENSLAFG00000029670) #24	RAP1A (ENSLAFG00000000086) #25	ADORA3 (ENSLAFG00000004812)	ENSLAFG00000027080 #26	C1orf162 (ENSLAFG00000004811) #27	ATP5PB (ENSLAFG00000004809) #28	WDR77 (ENSLAFG00000004805) #29	ENSLAFG00000017713 #30	ENSLAFG00000030474	ENSLAFG00000026035	PIFO (ENSLAFG00000000550) #31	CHIA (ENSLAFG00000018294) #32	CHI3L2 (ENSLAFG00000018287) #34	DENND2D (ENSLAFG00000022885) #35
Xenarthra	ANCESTRAL SPECIES	239									ENSGT00940000160965 #15	ENSGT00950000182945.b.a.a.b.a #16	ENSGT00940000156024 #17	ENSGT00950000183119.a.e.a #18	ENSGT00940000159166 #20	ENSGT00390000000873.a.a #19	ENSGT00950000182852.B #21	ENSGT00940000155343 #22	ENSGT00940000158400 #23	ENSGT00530000063849.B #24	ENSGT00940000160251 #25	ENSGT00930000151073 #26	ENSGT00390000015005 #27	ENSGT00390000001958 #28	ENSGT00390000010711 #29
Armadillo	DUPLICATION
Armadillo	DUPLICATION
Armadillo	MODERN SPECIES	3108								PPM1J (ENSDNOG00000017928) #15	RHOC (ENSDNOG00000012825) #16	MOV10 (ENSDNOG00000007631) #17	ENSDNOG00000036861 #18	WNT2B (ENSDNOG00000001790) #20	ST7L (ENSDNOG00000036591) #19	CTTNBP2NL (ENSDNOG00000043863) #21	ENSDNOG00000003964 #22	ENSDNOG00000049590 #22	DDX20 (ENSDNOG00000030865) #23	INKA2 (ENSDNOG00000043204) #24	RAP1A (ENSDNOG00000007809) #25	TMIGD3 (ENSDNOG00000004748) #26	ENSDNOG00000002467 #27	ENSDNOG00000031419 #28	ENSDNOG00000046177 #29
Armadillo	MODERN SPECIES	3108									PPM1J (ENSDNOG00000017928) #15	RHOC (ENSDNOG00000012825) #16	MOV10 (ENSDNOG00000007631) #17	ENSDNOG00000036861 #18	WNT2B (ENSDNOG00000001790) #20	ST7L (ENSDNOG00000036591) #19	CTTNBP2NL (ENSDNOG00000043863) #21	ENSDNOG00000003964 #22	ENSDNOG00000049590 #22	DDX20 (ENSDNOG00000030865) #23	INKA2 (ENSDNOG00000043204) #24	RAP1A (ENSDNOG00000007809) #25	TMIGD3 (ENSDNOG00000004748) #26	ENSDNOG00000002467 #27	ENSDNOG00000031419 #28	ENSDNOG00000046177 #29
Armadillo	MODERN SPECIES	1557														KCND2 (ENSDNOG00000000011)	ENSDNOG00000009660	ENSDNOG00000044328 #22	TSPAN12 (ENSDNOG00000033776)	ING3 (ENSDNOG00000001495)	CPED1 (ENSDNOG00000001500)